Query 038786
Match_columns 186
No_of_seqs 143 out of 1772
Neff 10.8
Searched_HMMs 46136
Date Fri Mar 29 03:16:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038786.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038786hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1515 Arylacetamide deacetyl 99.9 1.2E-24 2.5E-29 160.2 16.6 176 3-185 149-334 (336)
2 PRK10162 acetyl esterase; Prov 99.9 5.7E-25 1.2E-29 163.4 14.3 172 2-185 137-314 (318)
3 PF07859 Abhydrolase_3: alpha/ 99.9 8.6E-24 1.9E-28 148.7 8.0 148 2-156 54-210 (211)
4 COG0657 Aes Esterase/lipase [L 99.9 8.3E-22 1.8E-26 146.4 15.5 168 2-184 135-308 (312)
5 PF00326 Peptidase_S9: Prolyl 99.8 3.7E-20 8.1E-25 130.5 9.6 155 2-186 50-209 (213)
6 PLN02824 hydrolase, alpha/beta 99.7 5.9E-17 1.3E-21 119.5 8.7 161 5-186 93-294 (294)
7 TIGR02821 fghA_ester_D S-formy 99.7 3.4E-16 7.5E-21 114.4 11.4 136 11-185 135-273 (275)
8 PRK10749 lysophospholipase L2; 99.7 5.8E-16 1.3E-20 116.0 11.8 159 12-186 129-329 (330)
9 PHA02857 monoglyceride lipase; 99.7 3.4E-16 7.3E-21 114.4 9.3 156 12-186 95-273 (276)
10 COG1506 DAP2 Dipeptidyl aminop 99.7 2.4E-16 5.2E-21 126.6 8.8 151 3-186 460-616 (620)
11 KOG1455 Lysophospholipase [Lip 99.7 7.3E-16 1.6E-20 110.0 9.7 149 13-186 128-312 (313)
12 PF02230 Abhydrolase_2: Phosph 99.7 1.2E-15 2.5E-20 107.8 10.3 112 11-186 102-215 (216)
13 PLN02965 Probable pheophorbida 99.6 3.7E-15 8E-20 107.8 11.8 161 4-185 61-252 (255)
14 TIGR03343 biphenyl_bphD 2-hydr 99.6 1.5E-15 3.3E-20 111.1 9.4 161 4-185 91-282 (282)
15 PLN02442 S-formylglutathione h 99.6 3.6E-15 7.8E-20 109.3 11.1 123 11-157 140-265 (283)
16 PLN02679 hydrolase, alpha/beta 99.6 1.5E-15 3.2E-20 115.0 8.3 66 107-185 288-356 (360)
17 PRK00870 haloalkane dehalogena 99.6 4.6E-15 1E-19 109.9 10.4 160 5-186 106-301 (302)
18 PRK03592 haloalkane dehalogena 99.6 3E-15 6.6E-20 110.4 9.1 162 4-185 83-288 (295)
19 PRK10673 acyl-CoA esterase; Pr 99.6 1.4E-15 2.9E-20 109.8 6.8 158 7-186 74-255 (255)
20 PRK11460 putative hydrolase; P 99.6 1.2E-14 2.7E-19 103.6 11.4 93 12-157 101-195 (232)
21 TIGR02240 PHA_depoly_arom poly 99.6 1.5E-15 3.2E-20 111.1 6.7 157 7-185 84-265 (276)
22 PLN02385 hydrolase; alpha/beta 99.6 1.4E-14 3E-19 109.4 12.1 156 13-186 161-345 (349)
23 PLN02298 hydrolase, alpha/beta 99.6 1.9E-14 4.1E-19 107.9 12.6 148 13-185 133-316 (330)
24 PF01738 DLH: Dienelactone hyd 99.6 1E-15 2.2E-20 108.3 5.2 129 3-186 85-217 (218)
25 COG1647 Esterase/lipase [Gener 99.6 1.3E-15 2.9E-20 104.0 5.2 152 12-185 83-243 (243)
26 PF08840 BAAT_C: BAAT / Acyl-C 99.6 1.9E-15 4.1E-20 106.3 6.0 174 2-186 8-210 (213)
27 TIGR03056 bchO_mg_che_rel puta 99.6 5.4E-15 1.2E-19 107.8 8.7 161 3-184 84-278 (278)
28 COG2267 PldB Lysophospholipase 99.6 2.7E-14 5.8E-19 105.2 12.1 158 13-186 106-294 (298)
29 PRK10566 esterase; Provisional 99.6 1.6E-14 3.5E-19 104.0 9.4 147 3-186 94-248 (249)
30 PRK03204 haloalkane dehalogena 99.6 6.1E-15 1.3E-19 108.4 7.1 162 2-183 89-285 (286)
31 TIGR03695 menH_SHCHC 2-succiny 99.6 8.5E-15 1.8E-19 104.4 7.3 158 5-184 61-251 (251)
32 TIGR03611 RutD pyrimidine util 99.5 3.4E-14 7.3E-19 102.1 9.0 157 8-185 74-257 (257)
33 PRK06489 hypothetical protein; 99.5 2.2E-14 4.7E-19 108.8 8.1 67 106-186 287-357 (360)
34 PF10340 DUF2424: Protein of u 99.5 1E-13 2.3E-18 103.1 11.3 153 4-157 185-352 (374)
35 COG0400 Predicted esterase [Ge 99.5 6.8E-14 1.5E-18 97.0 9.0 106 12-185 97-204 (207)
36 TIGR01250 pro_imino_pep_2 prol 99.5 8.4E-15 1.8E-19 106.8 4.6 62 107-184 227-288 (288)
37 PLN02652 hydrolase; alpha/beta 99.5 5.4E-14 1.2E-18 107.4 8.9 67 106-186 319-387 (395)
38 PRK11071 esterase YqiA; Provis 99.5 8.3E-14 1.8E-18 96.3 9.0 134 3-184 50-189 (190)
39 PLN02894 hydrolase, alpha/beta 99.5 7.5E-14 1.6E-18 107.1 9.3 64 107-185 321-384 (402)
40 TIGR02427 protocat_pcaD 3-oxoa 99.5 3E-14 6.5E-19 101.7 6.6 158 5-184 70-251 (251)
41 PRK08775 homoserine O-acetyltr 99.5 1.6E-14 3.4E-19 108.8 5.3 64 107-185 273-338 (343)
42 PRK05077 frsA fermentation/res 99.5 1.3E-13 2.8E-18 106.0 10.3 154 3-186 252-412 (414)
43 TIGR01836 PHA_synth_III_C poly 99.5 2.6E-13 5.7E-18 102.5 11.6 50 3-58 125-174 (350)
44 PRK14875 acetoin dehydrogenase 99.5 1.1E-13 2.4E-18 105.2 9.5 157 5-186 188-371 (371)
45 TIGR01738 bioH putative pimelo 99.5 5.8E-14 1.3E-18 100.0 7.4 62 107-183 184-245 (245)
46 PLN02578 hydrolase 99.5 2.4E-13 5.2E-18 102.9 10.8 62 107-184 292-353 (354)
47 PRK10349 carboxylesterase BioH 99.5 1.1E-13 2.5E-18 100.0 8.6 153 12-185 72-255 (256)
48 PRK13604 luxD acyl transferase 99.5 1.7E-13 3.6E-18 100.0 9.1 136 3-157 98-247 (307)
49 PRK11126 2-succinyl-6-hydroxy- 99.5 9.3E-14 2E-18 99.5 7.7 152 7-185 59-241 (242)
50 PRK07581 hypothetical protein; 99.5 1.3E-13 2.8E-18 103.7 7.4 64 107-185 271-335 (339)
51 PRK00175 metX homoserine O-ace 99.5 2.1E-13 4.6E-18 104.0 8.3 67 107-186 305-374 (379)
52 PLN03087 BODYGUARD 1 domain co 99.5 1E-13 2.3E-18 107.6 5.9 62 110-185 417-478 (481)
53 TIGR01392 homoserO_Ac_trn homo 99.4 1.2E-13 2.6E-18 104.4 5.7 66 106-184 283-351 (351)
54 KOG4409 Predicted hydrolase/ac 99.4 8.7E-13 1.9E-17 96.2 9.6 41 12-58 158-198 (365)
55 TIGR01607 PST-A Plasmodium sub 99.4 6.2E-13 1.3E-17 99.7 9.0 60 114-185 272-332 (332)
56 KOG1552 Predicted alpha/beta h 99.4 3E-13 6.5E-18 94.9 6.5 130 3-184 118-250 (258)
57 PRK06765 homoserine O-acetyltr 99.4 1.4E-13 3E-18 104.8 4.9 66 107-185 319-387 (389)
58 KOG1454 Predicted hydrolase/ac 99.4 7.3E-13 1.6E-17 98.6 8.3 65 107-186 259-324 (326)
59 PF12697 Abhydrolase_6: Alpha/ 99.4 4.9E-14 1.1E-18 99.0 1.6 140 4-157 56-219 (228)
60 COG0412 Dienelactone hydrolase 99.4 4.7E-12 1E-16 90.3 11.6 130 3-186 99-233 (236)
61 PRK10115 protease 2; Provision 99.4 3.1E-12 6.7E-17 104.0 11.0 135 2-156 510-655 (686)
62 PLN03084 alpha/beta hydrolase 99.4 1.6E-12 3.4E-17 98.9 8.2 160 4-185 187-383 (383)
63 TIGR03100 hydr1_PEP hydrolase, 99.4 2.2E-12 4.7E-17 94.4 8.6 162 3-185 88-274 (274)
64 PF12695 Abhydrolase_5: Alpha/ 99.4 3.5E-12 7.5E-17 84.3 8.4 88 11-154 58-145 (145)
65 KOG4178 Soluble epoxide hydrol 99.4 1.1E-11 2.4E-16 90.0 10.7 162 4-185 103-319 (322)
66 KOG2100 Dipeptidyl aminopeptid 99.4 5.7E-12 1.2E-16 103.0 9.9 144 5-185 597-746 (755)
67 PLN02980 2-oxoglutarate decarb 99.3 1.8E-12 3.9E-17 113.7 6.3 160 7-185 1438-1638(1655)
68 TIGR01249 pro_imino_pep_1 prol 99.3 9.7E-13 2.1E-17 97.7 2.7 46 4-55 85-130 (306)
69 PLN02511 hydrolase 99.3 3.5E-12 7.6E-17 97.5 5.5 52 105-158 292-343 (388)
70 KOG2984 Predicted hydrolase [G 99.3 3E-13 6.5E-18 91.4 -1.6 151 7-185 107-275 (277)
71 PF05728 UPF0227: Uncharacteri 99.3 5E-11 1.1E-15 81.8 9.0 130 12-184 57-187 (187)
72 KOG3043 Predicted hydrolase re 99.2 1.3E-11 2.7E-16 84.9 5.2 129 3-186 109-240 (242)
73 PF00561 Abhydrolase_1: alpha/ 99.2 1.6E-11 3.5E-16 86.9 5.6 47 2-54 32-78 (230)
74 PRK10985 putative hydrolase; P 99.2 7.5E-12 1.6E-16 93.6 4.1 148 3-158 120-299 (324)
75 PLN02211 methyl indole-3-aceta 99.2 5.2E-10 1.1E-14 81.8 11.9 58 111-184 211-268 (273)
76 KOG2112 Lysophospholipase [Lip 99.2 1E-10 2.2E-15 79.8 7.4 111 12-185 91-203 (206)
77 KOG2281 Dipeptidyl aminopeptid 99.2 1.3E-10 2.7E-15 90.8 8.0 150 2-186 712-867 (867)
78 TIGR01840 esterase_phb esteras 99.1 4.4E-10 9.6E-15 79.2 9.5 110 4-139 83-197 (212)
79 COG3208 GrsT Predicted thioest 99.1 5.7E-10 1.2E-14 78.1 9.4 145 14-184 74-234 (244)
80 KOG4388 Hormone-sensitive lipa 99.1 2.2E-10 4.7E-15 88.6 7.7 67 91-159 768-834 (880)
81 PRK10439 enterobactin/ferric e 99.1 2E-09 4.3E-14 82.7 12.2 108 12-157 286-394 (411)
82 KOG4391 Predicted alpha/beta h 99.1 6.4E-11 1.4E-15 81.2 3.1 143 3-185 136-281 (300)
83 PLN00021 chlorophyllase 99.1 3.9E-09 8.4E-14 78.4 11.5 139 12-185 124-282 (313)
84 COG2945 Predicted hydrolase of 99.1 7.8E-10 1.7E-14 74.5 7.0 114 2-184 90-205 (210)
85 PF05448 AXE1: Acetyl xylan es 99.0 5.2E-11 1.1E-15 88.5 1.4 157 2-186 161-320 (320)
86 TIGR01838 PHA_synth_I poly(R)- 99.0 2.3E-09 5E-14 84.5 10.3 56 3-59 251-306 (532)
87 KOG2382 Predicted alpha/beta h 99.0 3.8E-09 8.1E-14 77.0 10.1 59 114-186 255-313 (315)
88 KOG4627 Kynurenine formamidase 99.0 3.1E-10 6.7E-15 77.2 3.9 123 4-157 125-250 (270)
89 PLN02872 triacylglycerol lipas 99.0 4.3E-09 9.3E-14 80.5 10.3 62 114-185 327-388 (395)
90 COG0627 Predicted esterase [Ge 99.0 1.2E-09 2.7E-14 80.6 6.4 144 15-185 153-310 (316)
91 PRK05371 x-prolyl-dipeptidyl a 99.0 1.3E-08 2.7E-13 83.9 11.9 153 13-185 337-518 (767)
92 KOG4667 Predicted esterase [Li 98.9 5E-09 1.1E-13 71.9 7.5 132 2-157 90-242 (269)
93 COG0596 MhpC Predicted hydrola 98.9 1.9E-08 4.2E-13 71.6 11.2 47 4-56 78-124 (282)
94 PRK04940 hypothetical protein; 98.9 2.6E-08 5.5E-13 67.4 10.4 119 14-185 60-179 (180)
95 PF08538 DUF1749: Protein of u 98.9 1.2E-09 2.7E-14 79.3 3.4 171 2-184 92-303 (303)
96 PRK07868 acyl-CoA synthetase; 98.9 1.5E-08 3.3E-13 86.2 9.9 69 106-186 292-361 (994)
97 PF06028 DUF915: Alpha/beta hy 98.9 2.9E-08 6.3E-13 71.4 9.6 148 3-184 92-253 (255)
98 PRK05855 short chain dehydroge 98.8 3.1E-09 6.7E-14 85.4 4.6 60 110-185 232-291 (582)
99 COG3571 Predicted hydrolase of 98.8 2E-07 4.3E-12 61.3 11.4 123 12-185 87-210 (213)
100 PF06500 DUF1100: Alpha/beta h 98.8 5.9E-08 1.3E-12 73.6 9.3 151 3-185 248-408 (411)
101 COG4099 Predicted peptidase [G 98.8 9.1E-09 2E-13 73.9 4.6 87 11-149 266-354 (387)
102 KOG3101 Esterase D [General fu 98.8 2.1E-09 4.6E-14 73.4 1.4 121 12-157 139-264 (283)
103 COG2382 Fes Enterochelin ester 98.7 1.2E-07 2.6E-12 68.6 9.1 109 12-157 175-283 (299)
104 PF00756 Esterase: Putative es 98.7 4.4E-09 9.6E-14 75.9 1.8 38 15-58 116-153 (251)
105 PF03096 Ndr: Ndr family; Int 98.7 3.3E-08 7.1E-13 71.4 6.1 151 2-185 87-278 (283)
106 COG0429 Predicted hydrolase of 98.7 2.7E-08 5.8E-13 72.7 5.4 70 104-184 267-338 (345)
107 PF10503 Esterase_phd: Esteras 98.7 6.5E-08 1.4E-12 68.1 7.1 39 12-56 95-133 (220)
108 TIGR01839 PHA_synth_II poly(R) 98.7 2E-07 4.4E-12 73.4 10.4 56 2-59 276-332 (560)
109 PF06821 Ser_hydrolase: Serine 98.7 1.1E-07 2.4E-12 64.5 7.4 104 14-159 55-158 (171)
110 COG1770 PtrB Protease II [Amin 98.7 9.6E-08 2.1E-12 75.4 7.4 129 4-156 515-658 (682)
111 KOG1838 Alpha/beta hydrolase [ 98.7 1.5E-07 3.2E-12 71.1 8.0 147 3-159 187-368 (409)
112 PF12740 Chlorophyllase2: Chlo 98.6 1.7E-06 3.7E-11 62.0 11.5 112 12-158 89-209 (259)
113 COG1505 Serine proteases of th 98.5 3.8E-08 8.2E-13 76.8 2.0 131 5-157 489-627 (648)
114 COG3458 Acetyl esterase (deace 98.5 1E-07 2.2E-12 67.8 3.2 128 12-157 174-303 (321)
115 KOG2551 Phospholipase/carboxyh 98.5 1E-06 2.2E-11 61.0 7.9 111 17-185 107-219 (230)
116 PF03959 FSH1: Serine hydrolas 98.5 1.1E-06 2.4E-11 62.0 8.1 98 15-157 103-204 (212)
117 COG4947 Uncharacterized protei 98.4 5.8E-08 1.3E-12 64.3 0.3 120 6-157 93-218 (227)
118 TIGR03101 hydr2_PEP hydrolase, 98.4 2.6E-07 5.7E-12 67.1 3.5 49 3-58 89-137 (266)
119 KOG2931 Differentiation-relate 98.4 1.6E-06 3.4E-11 62.5 7.1 155 2-185 110-305 (326)
120 KOG2564 Predicted acetyltransf 98.4 3E-07 6.6E-12 65.7 3.5 34 141-186 294-327 (343)
121 cd00707 Pancreat_lipase_like P 98.3 4.7E-07 1E-11 66.3 2.6 48 3-56 99-148 (275)
122 TIGR01849 PHB_depoly_PhaZ poly 98.3 2.1E-05 4.5E-10 60.3 11.2 70 107-186 333-406 (406)
123 KOG2237 Predicted serine prote 98.3 4.7E-06 1E-10 65.9 7.9 135 4-157 537-686 (712)
124 PF12715 Abhydrolase_7: Abhydr 98.2 2E-07 4.4E-12 69.8 -0.1 46 2-54 212-259 (390)
125 PF03403 PAF-AH_p_II: Platelet 98.2 3.5E-06 7.5E-11 64.4 6.3 98 7-157 221-318 (379)
126 COG4814 Uncharacterized protei 98.2 3E-05 6.5E-10 54.9 10.1 53 3-56 125-177 (288)
127 PF03583 LIP: Secretory lipase 98.2 1.9E-05 4.2E-10 58.3 9.5 44 114-157 221-267 (290)
128 KOG3847 Phospholipase A2 (plat 98.2 8.2E-06 1.8E-10 59.5 6.9 130 4-186 231-371 (399)
129 COG3243 PhaC Poly(3-hydroxyalk 98.2 9.3E-06 2E-10 61.5 7.5 52 3-59 170-221 (445)
130 COG2819 Predicted hydrolase of 98.2 1.4E-05 3.1E-10 57.2 7.8 42 12-59 135-176 (264)
131 TIGR03230 lipo_lipase lipoprot 98.2 2.5E-06 5.5E-11 65.9 4.4 46 4-55 107-154 (442)
132 TIGR00976 /NonD putative hydro 98.1 2E-05 4.4E-10 63.3 9.5 50 2-57 84-134 (550)
133 PF09752 DUF2048: Uncharacteri 98.1 3.9E-05 8.5E-10 57.2 10.0 31 4-35 166-196 (348)
134 PF06057 VirJ: Bacterial virul 98.1 8.7E-06 1.9E-10 55.5 6.1 125 11-185 65-191 (192)
135 COG3545 Predicted esterase of 98.1 2.8E-05 6E-10 52.1 8.0 119 13-183 58-176 (181)
136 COG2021 MET2 Homoserine acetyl 98.1 6.5E-06 1.4E-10 61.4 5.0 44 5-54 137-181 (368)
137 COG3150 Predicted esterase [Ge 98.0 4E-05 8.6E-10 50.9 7.0 130 12-184 57-187 (191)
138 PF02129 Peptidase_S15: X-Pro 97.9 6.4E-06 1.4E-10 60.3 2.9 52 2-59 88-140 (272)
139 PF07819 PGAP1: PGAP1-like pro 97.9 1.1E-05 2.4E-10 57.3 2.8 41 12-55 83-123 (225)
140 KOG3253 Predicted alpha/beta h 97.8 0.0001 2.3E-09 58.3 7.9 101 12-159 248-350 (784)
141 PF00135 COesterase: Carboxyle 97.7 1.4E-05 3.1E-10 63.8 1.8 50 2-55 191-245 (535)
142 PLN02733 phosphatidylcholine-s 97.7 2.6E-05 5.7E-10 60.6 2.7 47 10-58 158-204 (440)
143 PF05705 DUF829: Eukaryotic pr 97.7 0.00017 3.7E-09 51.8 6.7 59 114-183 180-240 (240)
144 COG3509 LpqC Poly(3-hydroxybut 97.7 0.0011 2.4E-08 48.4 10.2 38 12-55 142-179 (312)
145 PF01764 Lipase_3: Lipase (cla 97.6 6.7E-05 1.5E-09 49.1 3.8 44 11-54 61-105 (140)
146 cd00312 Esterase_lipase Estera 97.6 1E-05 2.3E-10 64.1 -0.3 51 2-56 159-214 (493)
147 PF10230 DUF2305: Uncharacteri 97.6 7.9E-05 1.7E-09 54.4 4.2 44 12-58 82-125 (266)
148 KOG3975 Uncharacterized conser 97.6 0.00039 8.4E-09 49.4 6.6 55 114-183 244-300 (301)
149 PF07224 Chlorophyllase: Chlor 97.5 3.7E-05 7.9E-10 54.9 1.3 51 2-56 98-158 (307)
150 PF11187 DUF2974: Protein of u 97.5 5.7E-05 1.2E-09 53.6 2.2 51 3-55 71-123 (224)
151 KOG2624 Triglyceride lipase-ch 97.5 0.00085 1.8E-08 51.6 8.6 52 4-58 151-202 (403)
152 cd00741 Lipase Lipase. Lipase 97.5 0.00023 5.1E-09 47.4 4.9 42 12-55 26-67 (153)
153 COG4188 Predicted dienelactone 97.5 0.00017 3.6E-09 54.1 4.4 29 7-35 152-180 (365)
154 PF08386 Abhydrolase_4: TAP-li 97.5 0.00047 1E-08 42.8 5.7 58 113-184 35-92 (103)
155 PF06342 DUF1057: Alpha/beta h 97.4 0.00077 1.7E-08 48.9 7.1 44 6-57 95-139 (297)
156 PF00975 Thioesterase: Thioest 97.4 0.00021 4.5E-09 50.8 4.0 38 14-54 66-103 (229)
157 PF11144 DUF2920: Protein of u 97.3 0.00058 1.3E-08 52.0 5.8 135 14-157 184-351 (403)
158 COG2272 PnbA Carboxylesterase 97.3 2.6E-05 5.5E-10 60.3 -1.5 51 2-56 163-218 (491)
159 PF05990 DUF900: Alpha/beta hy 97.3 0.0002 4.2E-09 51.3 2.9 54 4-57 83-139 (233)
160 cd00519 Lipase_3 Lipase (class 97.2 0.00044 9.6E-09 49.3 3.9 43 12-55 126-168 (229)
161 PF12048 DUF3530: Protein of u 97.2 0.0047 1E-07 46.2 9.4 117 12-186 191-309 (310)
162 PF02450 LCAT: Lecithin:choles 97.1 0.00036 7.8E-09 53.8 2.5 47 12-58 117-163 (389)
163 PF00151 Lipase: Lipase; Inte 97.0 0.00026 5.7E-09 53.2 1.3 49 4-56 138-188 (331)
164 COG4782 Uncharacterized protei 96.9 0.00093 2E-08 50.0 2.9 55 3-57 180-236 (377)
165 PF11339 DUF3141: Protein of u 96.9 0.057 1.2E-06 42.8 12.5 53 106-159 292-353 (581)
166 COG4757 Predicted alpha/beta h 96.8 0.0021 4.5E-08 45.4 4.1 63 107-183 212-280 (281)
167 PLN02454 triacylglycerol lipas 96.8 0.0018 3.9E-08 49.7 4.1 41 15-55 229-271 (414)
168 COG1073 Hydrolases of the alph 96.6 0.0084 1.8E-07 43.8 6.6 62 114-186 234-297 (299)
169 KOG4840 Predicted hydrolases o 96.6 0.0057 1.2E-07 43.0 4.8 51 4-58 93-147 (299)
170 KOG1516 Carboxylesterase and r 96.3 0.0014 3.1E-08 52.7 0.8 49 2-54 178-231 (545)
171 PLN00413 triacylglycerol lipas 96.2 0.0028 6.2E-08 49.4 2.1 24 12-35 282-305 (479)
172 PLN02571 triacylglycerol lipas 96.2 0.0082 1.8E-07 46.3 4.4 22 15-36 227-248 (413)
173 PLN02408 phospholipase A1 96.2 0.0088 1.9E-07 45.4 4.3 23 15-37 201-223 (365)
174 PF10142 PhoPQ_related: PhoPQ- 96.0 0.0096 2.1E-07 45.4 3.9 141 12-184 170-318 (367)
175 PLN02802 triacylglycerol lipas 95.8 0.015 3.2E-07 45.9 4.3 23 15-37 331-353 (509)
176 KOG3724 Negative regulator of 95.8 0.0065 1.4E-07 50.0 2.5 23 13-35 181-203 (973)
177 COG3319 Thioesterase domains o 95.8 0.016 3.5E-07 42.0 4.2 41 13-56 64-104 (257)
178 PLN02934 triacylglycerol lipas 95.8 0.0056 1.2E-07 48.2 1.9 24 12-35 319-342 (515)
179 PLN02162 triacylglycerol lipas 95.7 0.0066 1.4E-07 47.3 2.1 24 12-35 276-299 (475)
180 PF03283 PAE: Pectinacetyleste 95.7 0.0086 1.9E-07 45.7 2.7 35 3-37 143-179 (361)
181 PF01674 Lipase_2: Lipase (cla 95.6 0.0037 8E-08 44.2 0.3 31 4-35 66-96 (219)
182 PF11288 DUF3089: Protein of u 95.5 0.015 3.3E-07 40.6 3.1 33 3-35 83-116 (207)
183 PLN02847 triacylglycerol lipas 95.5 0.024 5.2E-07 45.6 4.4 23 14-36 251-273 (633)
184 PLN02310 triacylglycerol lipas 95.5 0.011 2.4E-07 45.5 2.6 22 14-35 209-230 (405)
185 PLN03037 lipase class 3 family 95.5 0.025 5.4E-07 44.8 4.4 22 14-35 318-339 (525)
186 PF05057 DUF676: Putative seri 95.4 0.028 6.2E-07 39.8 4.2 23 14-36 78-100 (217)
187 COG2936 Predicted acyl esteras 95.3 0.26 5.5E-06 39.8 9.5 50 2-57 111-161 (563)
188 smart00824 PKS_TE Thioesterase 95.3 0.028 6.2E-07 38.8 3.9 39 12-53 62-100 (212)
189 PLN02324 triacylglycerol lipas 95.2 0.016 3.4E-07 44.8 2.6 21 15-35 216-236 (415)
190 COG1075 LipA Predicted acetylt 95.2 0.021 4.6E-07 43.3 3.2 43 12-58 125-167 (336)
191 KOG4569 Predicted lipase [Lipi 95.1 0.032 6.9E-07 42.3 4.0 31 9-39 166-196 (336)
192 PF02273 Acyl_transf_2: Acyl t 95.1 0.03 6.5E-07 40.1 3.4 133 3-157 91-240 (294)
193 TIGR03502 lipase_Pla1_cef extr 95.0 0.04 8.7E-07 46.2 4.5 71 111-184 696-791 (792)
194 PLN02719 triacylglycerol lipas 95.0 0.02 4.4E-07 45.2 2.6 22 15-36 299-320 (518)
195 PLN02753 triacylglycerol lipas 94.9 0.021 4.5E-07 45.3 2.6 23 14-36 312-334 (531)
196 PLN02517 phosphatidylcholine-s 94.9 0.0068 1.5E-07 48.7 -0.0 46 12-57 211-265 (642)
197 PLN02761 lipase class 3 family 94.8 0.023 4.9E-07 45.0 2.6 21 15-35 295-315 (527)
198 PTZ00472 serine carboxypeptida 94.8 0.044 9.5E-07 43.4 4.1 48 12-59 169-220 (462)
199 PF07082 DUF1350: Protein of u 94.7 1.1 2.4E-05 32.3 10.9 44 112-157 163-207 (250)
200 PF05677 DUF818: Chlamydia CHL 94.7 0.021 4.5E-07 42.8 1.9 32 4-35 202-236 (365)
201 PF01083 Cutinase: Cutinase; 94.3 0.086 1.9E-06 36.2 4.1 44 12-55 79-122 (179)
202 KOG4389 Acetylcholinesterase/B 94.2 0.0068 1.5E-07 47.4 -1.5 51 2-56 201-256 (601)
203 PF04301 DUF452: Protein of un 94.1 0.45 9.7E-06 33.6 7.4 69 12-89 55-127 (213)
204 KOG2369 Lecithin:cholesterol a 94.0 0.031 6.8E-07 43.5 1.6 26 12-37 180-205 (473)
205 COG5153 CVT17 Putative lipase 93.8 0.057 1.2E-06 39.6 2.5 24 12-35 274-297 (425)
206 KOG4540 Putative lipase essent 93.8 0.057 1.2E-06 39.6 2.5 24 12-35 274-297 (425)
207 TIGR03712 acc_sec_asp2 accesso 93.6 0.63 1.4E-05 36.9 8.0 53 12-72 355-407 (511)
208 PRK10252 entF enterobactin syn 93.3 0.11 2.4E-06 46.4 4.1 38 14-54 1133-1170(1296)
209 PF07519 Tannase: Tannase and 93.3 0.27 5.8E-06 39.2 5.8 62 114-185 355-426 (474)
210 KOG1551 Uncharacterized conser 93.3 0.97 2.1E-05 33.1 7.9 26 10-35 191-216 (371)
211 PF05577 Peptidase_S28: Serine 92.3 0.12 2.7E-06 40.6 2.7 40 12-57 111-150 (434)
212 PF06850 PHB_depo_C: PHB de-po 92.3 0.51 1.1E-05 32.7 5.3 67 111-186 133-202 (202)
213 PF08237 PE-PPE: PE-PPE domain 91.6 0.49 1.1E-05 33.8 4.9 27 12-38 46-72 (225)
214 PF05277 DUF726: Protein of un 91.0 0.65 1.4E-05 35.4 5.2 44 12-56 218-261 (345)
215 PF06259 Abhydrolase_8: Alpha/ 90.4 0.29 6.2E-06 33.6 2.7 35 12-52 107-141 (177)
216 PF00450 Peptidase_S10: Serine 90.1 0.55 1.2E-05 36.5 4.4 47 12-58 134-184 (415)
217 PF07519 Tannase: Tannase and 89.6 0.27 5.8E-06 39.2 2.3 42 12-59 113-154 (474)
218 PF12242 Eno-Rase_NADH_b: NAD( 89.6 0.4 8.7E-06 27.8 2.4 32 4-35 27-61 (78)
219 KOG1553 Predicted alpha/beta h 89.3 0.3 6.5E-06 37.0 2.2 38 12-56 309-346 (517)
220 PTZ00472 serine carboxypeptida 87.7 1.8 4E-05 34.5 5.8 60 114-185 366-458 (462)
221 KOG2183 Prolylcarboxypeptidase 87.5 0.22 4.8E-06 38.5 0.6 50 5-59 156-207 (492)
222 PF02089 Palm_thioest: Palmito 87.4 1.2 2.6E-05 32.8 4.3 38 14-56 80-117 (279)
223 PF05576 Peptidase_S37: PS-10 87.2 0.94 2E-05 35.2 3.7 60 113-183 352-411 (448)
224 KOG2521 Uncharacterized conser 86.8 2.5 5.4E-05 32.3 5.7 61 114-185 227-289 (350)
225 PLN02633 palmitoyl protein thi 86.5 1.1 2.4E-05 33.5 3.7 39 14-56 94-132 (314)
226 PF09994 DUF2235: Uncharacteri 86.0 0.68 1.5E-05 34.2 2.5 34 3-36 80-114 (277)
227 COG3673 Uncharacterized conser 85.7 0.35 7.5E-06 36.2 0.8 34 3-36 110-144 (423)
228 COG3946 VirJ Type IV secretory 85.5 0.76 1.6E-05 35.6 2.5 24 12-35 324-347 (456)
229 PLN02606 palmitoyl-protein thi 85.2 1.5 3.2E-05 32.8 3.8 40 14-57 95-134 (306)
230 PF06500 DUF1100: Alpha/beta h 84.5 1.6 3.5E-05 34.1 3.9 63 114-185 191-254 (411)
231 PF10605 3HBOH: 3HB-oligomer h 84.1 1.4 3E-05 36.0 3.5 71 114-185 557-636 (690)
232 PLN02209 serine carboxypeptida 79.5 2.1 4.6E-05 33.9 3.0 47 12-58 165-215 (437)
233 KOG3967 Uncharacterized conser 79.0 3.3 7.1E-05 29.4 3.5 37 12-52 188-224 (297)
234 PF12146 Hydrolase_4: Putative 78.3 11 0.00024 21.9 5.2 62 114-184 18-79 (79)
235 PLN03016 sinapoylglucose-malat 77.6 2.9 6.4E-05 33.1 3.3 47 12-58 163-213 (433)
236 cd07224 Pat_like Patatin-like 76.9 1.9 4E-05 31.0 1.9 32 4-35 18-50 (233)
237 KOG2029 Uncharacterized conser 76.6 2.5 5.5E-05 34.5 2.7 24 12-35 524-547 (697)
238 KOG1282 Serine carboxypeptidas 75.9 7.7 0.00017 30.9 5.1 55 5-59 157-217 (454)
239 cd07198 Patatin Patatin-like p 74.3 2.2 4.8E-05 28.9 1.7 32 3-35 16-47 (172)
240 PLN02213 sinapoylglucose-malat 74.0 6.6 0.00014 29.7 4.3 47 12-58 49-99 (319)
241 COG3007 Uncharacterized paraqu 74.0 2.7 5.9E-05 31.3 2.1 33 4-36 28-64 (398)
242 PRK10279 hypothetical protein; 71.5 2.7 6E-05 31.5 1.7 30 4-34 24-53 (300)
243 PLN02213 sinapoylglucose-malat 71.0 14 0.0003 27.9 5.4 59 114-185 235-316 (319)
244 PF12122 DUF3582: Protein of u 69.9 23 0.00051 21.8 5.6 49 128-185 12-60 (101)
245 cd07212 Pat_PNPLA9 Patatin-lik 68.8 4.2 9.2E-05 30.6 2.2 18 17-34 35-52 (312)
246 PLN02209 serine carboxypeptida 68.7 18 0.00039 28.8 5.7 59 114-185 353-434 (437)
247 PLN03016 sinapoylglucose-malat 67.5 18 0.00039 28.8 5.5 59 114-185 349-430 (433)
248 TIGR00128 fabD malonyl CoA-acy 66.8 4.5 9.7E-05 29.8 2.0 22 12-33 81-102 (290)
249 KOG1282 Serine carboxypeptidas 66.3 6.5 0.00014 31.3 2.9 60 114-185 365-447 (454)
250 cd07207 Pat_ExoU_VipD_like Exo 65.0 5.3 0.00011 27.5 2.0 31 4-35 18-48 (194)
251 KOG2541 Palmitoyl protein thio 63.5 13 0.00028 27.4 3.7 37 13-54 91-127 (296)
252 PLN03006 carbonate dehydratase 63.2 4.4 9.5E-05 30.3 1.4 30 3-32 161-190 (301)
253 cd07210 Pat_hypo_W_succinogene 62.6 6 0.00013 28.2 1.9 31 4-35 19-49 (221)
254 cd07225 Pat_PNPLA6_PNPLA7 Pata 62.0 5.7 0.00012 29.9 1.8 30 4-34 34-63 (306)
255 cd07218 Pat_iPLA2 Calcium-inde 61.4 6 0.00013 28.7 1.8 32 4-35 19-51 (245)
256 cd00883 beta_CA_cladeA Carboni 60.6 5.7 0.00012 27.4 1.5 30 3-32 70-99 (182)
257 TIGR03131 malonate_mdcH malona 60.5 6.3 0.00014 29.2 1.8 22 12-33 74-95 (295)
258 smart00827 PKS_AT Acyl transfe 59.6 7.9 0.00017 28.6 2.2 23 11-33 79-101 (298)
259 PF01734 Patatin: Patatin-like 58.1 9.3 0.0002 25.7 2.3 23 13-35 26-48 (204)
260 cd07211 Pat_PNPLA8 Patatin-lik 58.0 8.7 0.00019 28.8 2.2 17 17-33 44-60 (308)
261 COG2939 Carboxypeptidase C (ca 57.2 9.9 0.00022 30.5 2.4 42 12-56 196-237 (498)
262 cd07228 Pat_NTE_like_bacteria 57.1 9.3 0.0002 25.9 2.1 31 4-35 19-49 (175)
263 PLN00416 carbonate dehydratase 57.1 6.6 0.00014 28.8 1.4 30 3-32 129-158 (258)
264 cd07209 Pat_hypo_Ecoli_Z1214_l 56.8 9.4 0.0002 27.0 2.1 31 4-35 17-47 (215)
265 PF00698 Acyl_transf_1: Acyl t 56.7 4.5 9.8E-05 30.4 0.5 41 113-157 156-196 (318)
266 cd07208 Pat_hypo_Ecoli_yjju_li 56.4 10 0.00022 27.7 2.3 31 4-35 17-48 (266)
267 KOG4150 Predicted ATP-dependen 56.2 63 0.0014 27.0 6.6 68 113-185 899-969 (1034)
268 cd00884 beta_CA_cladeB Carboni 55.9 7 0.00015 27.2 1.3 30 3-32 76-105 (190)
269 cd07217 Pat17_PNPLA8_PNPLA9_li 55.9 9.9 0.00021 29.2 2.2 18 17-34 44-61 (344)
270 cd07205 Pat_PNPLA6_PNPLA7_NTE1 55.8 11 0.00024 25.5 2.3 31 4-35 19-49 (175)
271 PLN03019 carbonic anhydrase 55.2 7.6 0.00016 29.4 1.4 30 3-32 204-233 (330)
272 cd00382 beta_CA Carbonic anhyd 55.0 5.4 0.00012 25.3 0.6 26 4-29 49-74 (119)
273 cd07227 Pat_Fungal_NTE1 Fungal 55.0 10 0.00022 28.0 2.1 30 4-34 29-58 (269)
274 cd07220 Pat_PNPLA2 Patatin-lik 54.7 8.7 0.00019 28.0 1.7 31 4-35 23-57 (249)
275 cd07230 Pat_TGL4-5_like Triacy 54.0 9 0.00019 30.3 1.8 31 4-35 92-122 (421)
276 PLN02154 carbonic anhydrase 53.9 7.4 0.00016 28.9 1.2 30 3-32 155-184 (290)
277 COG1752 RssA Predicted esteras 53.3 13 0.00029 27.8 2.6 24 12-35 37-60 (306)
278 COG2830 Uncharacterized protei 53.3 8.9 0.00019 26.0 1.4 34 13-54 56-89 (214)
279 PLN03014 carbonic anhydrase 53.0 8 0.00017 29.5 1.3 30 3-32 209-238 (347)
280 cd07213 Pat17_PNPLA8_PNPLA9_li 53.0 12 0.00026 27.8 2.3 19 17-35 37-55 (288)
281 cd07216 Pat17_PNPLA8_PNPLA9_li 51.8 10 0.00022 28.5 1.7 17 17-33 45-61 (309)
282 KOG2214 Predicted esterase of 51.7 6 0.00013 31.7 0.5 22 15-36 203-224 (543)
283 KOG1455 Lysophospholipase [Lip 51.0 1E+02 0.0022 23.4 6.6 64 114-185 56-119 (313)
284 cd07232 Pat_PLPL Patain-like p 50.5 12 0.00026 29.5 1.9 31 4-35 86-116 (407)
285 KOG3787 Glutamate/aspartate an 50.1 3.9 8.5E-05 32.2 -0.7 32 3-35 420-451 (507)
286 COG4287 PqaA PhoPQ-activated p 50.1 26 0.00056 27.3 3.5 44 110-157 328-373 (507)
287 cd07204 Pat_PNPLA_like Patatin 49.2 16 0.00034 26.5 2.3 20 16-35 33-52 (243)
288 cd07199 Pat17_PNPLA8_PNPLA9_li 48.5 15 0.00033 26.7 2.1 18 17-34 37-54 (258)
289 cd07214 Pat17_isozyme_like Pat 47.6 15 0.00032 28.3 2.0 18 17-34 46-63 (349)
290 COG0331 FabD (acyl-carrier-pro 47.2 16 0.00035 27.6 2.2 22 12-33 83-104 (310)
291 PRK15219 carbonic anhydrase; P 46.9 12 0.00025 27.3 1.3 30 3-32 132-161 (245)
292 KOG2385 Uncharacterized conser 46.2 52 0.0011 26.9 4.7 45 12-57 445-489 (633)
293 cd07229 Pat_TGL3_like Triacylg 45.4 16 0.00034 28.6 1.9 29 6-35 104-132 (391)
294 PRK05077 frsA fermentation/res 45.4 1.2E+02 0.0025 24.0 6.7 39 114-152 195-234 (414)
295 cd01819 Patatin_and_cPLA2 Pata 45.3 20 0.00044 23.8 2.2 19 14-32 28-46 (155)
296 PF00450 Peptidase_S10: Serine 45.2 25 0.00054 27.3 3.0 59 114-184 332-414 (415)
297 cd07231 Pat_SDP1-like Sugar-De 44.9 17 0.00037 27.6 1.9 22 13-34 95-116 (323)
298 cd07222 Pat_PNPLA4 Patatin-lik 44.8 20 0.00043 26.0 2.2 30 4-33 18-50 (246)
299 PRK10673 acyl-CoA esterase; Pr 44.6 1.1E+02 0.0024 21.6 6.1 41 112-156 16-56 (255)
300 TIGR02816 pfaB_fam PfaB family 44.3 19 0.00041 29.6 2.2 27 9-35 260-286 (538)
301 PF10230 DUF2305: Uncharacteri 44.2 41 0.00089 24.7 3.8 42 113-155 222-265 (266)
302 COG0288 CynT Carbonic anhydras 44.1 9.9 0.00021 26.9 0.6 31 3-33 81-111 (207)
303 cd07215 Pat17_PNPLA8_PNPLA9_li 44.0 18 0.0004 27.4 2.1 17 17-33 43-59 (329)
304 cd07206 Pat_TGL3-4-5_SDP1 Tria 43.5 21 0.00045 26.9 2.2 31 4-35 88-118 (298)
305 PLN02752 [acyl-carrier protein 43.3 19 0.00042 27.4 2.1 17 17-33 127-143 (343)
306 PRK10437 carbonic anhydrase; P 43.0 16 0.00034 26.2 1.4 29 4-32 81-109 (220)
307 KOG4372 Predicted alpha/beta h 42.4 7.4 0.00016 30.3 -0.3 21 12-32 148-168 (405)
308 KOG2182 Hydrolytic enzymes of 42.2 70 0.0015 26.0 4.9 67 114-185 435-501 (514)
309 TIGR02240 PHA_depoly_arom poly 41.6 1.3E+02 0.0029 21.7 6.9 41 113-157 26-66 (276)
310 PF08250 Sperm_act_pep: Sperm- 41.0 7.7 0.00017 13.1 -0.2 6 20-25 1-6 (10)
311 TIGR03607 patatin-related prot 41.0 22 0.00048 30.4 2.2 19 15-33 67-85 (739)
312 TIGR01250 pro_imino_pep_2 prol 40.9 1.3E+02 0.0028 21.3 6.5 41 113-153 26-66 (288)
313 PF02273 Acyl_transf_2: Acyl t 40.0 1.5E+02 0.0033 21.9 6.1 67 114-185 31-97 (294)
314 PLN02824 hydrolase, alpha/beta 39.3 1.2E+02 0.0027 22.1 5.8 69 113-185 30-98 (294)
315 PF00698 Acyl_transf_1: Acyl t 38.9 94 0.002 23.4 5.2 23 11-33 81-103 (318)
316 COG2845 Uncharacterized protei 38.3 27 0.00057 26.6 2.0 26 12-37 115-140 (354)
317 cd07221 Pat_PNPLA3 Patatin-lik 37.8 30 0.00065 25.3 2.3 20 16-35 34-53 (252)
318 PLN02385 hydrolase; alpha/beta 37.5 1.6E+02 0.0034 22.4 6.2 41 113-155 88-128 (349)
319 cd01826 acyloxyacyl_hydrolase_ 36.8 15 0.00032 27.7 0.5 16 12-27 10-25 (305)
320 COG1647 Esterase/lipase [Gener 36.3 1.1E+02 0.0024 22.2 4.7 41 114-155 17-57 (243)
321 COG3675 Predicted lipase [Lipi 35.8 12 0.00025 28.0 -0.1 29 5-33 165-194 (332)
322 KOG1578 Predicted carbonic anh 33.4 13 0.00028 27.3 -0.2 32 3-34 143-174 (276)
323 PF03575 Peptidase_S51: Peptid 33.2 19 0.00041 23.9 0.6 12 16-27 70-81 (154)
324 PF00484 Pro_CA: Carbonic anhy 33.0 31 0.00067 22.8 1.6 29 4-32 45-73 (153)
325 PLN02578 hydrolase 33.0 2E+02 0.0043 22.0 6.2 62 113-185 87-148 (354)
326 COG4553 DepA Poly-beta-hydroxy 32.8 98 0.0021 23.5 4.1 64 114-186 341-407 (415)
327 PF10081 Abhydrolase_9: Alpha/ 31.7 36 0.00077 25.4 1.8 42 12-56 107-148 (289)
328 PF04816 DUF633: Family of unk 31.0 52 0.0011 23.2 2.5 22 13-36 67-88 (205)
329 TIGR03100 hydr1_PEP hydrolase, 30.8 2.1E+02 0.0046 20.9 6.6 40 113-152 27-69 (274)
330 PF05822 UMPH-1: Pyrimidine 5' 30.8 31 0.00067 25.2 1.4 14 12-25 178-191 (246)
331 cd03378 beta_CA_cladeC Carboni 30.6 25 0.00054 23.6 0.8 27 4-30 82-108 (154)
332 PRK07819 3-hydroxybutyryl-CoA 30.0 51 0.0011 24.5 2.5 23 12-34 4-27 (286)
333 cd07219 Pat_PNPLA1 Patatin-lik 29.9 47 0.001 26.0 2.3 19 16-34 46-64 (382)
334 PF08357 SEFIR: SEFIR domain; 29.7 63 0.0014 21.1 2.7 38 113-150 1-40 (150)
335 cd03379 beta_CA_cladeD Carboni 29.4 19 0.00041 23.6 0.1 26 4-29 46-71 (142)
336 PF05577 Peptidase_S28: Serine 29.0 1E+02 0.0022 24.4 4.1 42 113-159 377-418 (434)
337 PF01494 FAD_binding_3: FAD bi 28.3 95 0.0021 23.1 3.8 21 15-35 3-23 (356)
338 COG3340 PepE Peptidase E [Amin 28.2 14 0.00031 26.2 -0.6 15 15-29 118-132 (224)
339 PRK05629 hypothetical protein; 28.0 80 0.0017 23.8 3.3 41 111-151 4-46 (318)
340 KOG0813 Glyoxylase [General fu 27.7 1.6E+02 0.0035 21.9 4.5 64 115-185 140-206 (265)
341 PF14714 KH_dom-like: KH-domai 27.6 1.3E+02 0.0029 17.5 4.4 27 112-138 38-66 (80)
342 PF04083 Abhydro_lipase: Parti 27.2 31 0.00067 19.2 0.7 12 112-123 43-54 (63)
343 PF11823 DUF3343: Protein of u 26.4 1.3E+02 0.0028 17.0 4.7 29 129-157 14-47 (73)
344 KOG3128 Uncharacterized conser 26.3 35 0.00075 25.1 1.0 15 11-25 226-240 (298)
345 PLN02652 hydrolase; alpha/beta 26.0 2.4E+02 0.0051 22.2 5.6 40 113-155 137-176 (395)
346 PF07643 DUF1598: Protein of u 25.8 39 0.00084 20.1 0.9 31 4-34 33-63 (84)
347 PF05116 S6PP: Sucrose-6F-phos 25.7 16 0.00034 26.5 -0.8 22 2-23 168-191 (247)
348 COG4635 HemG Flavodoxin [Energ 25.4 1.3E+02 0.0027 20.6 3.3 36 114-149 2-38 (175)
349 KOG4287 Pectin acetylesterase 24.7 10 0.00023 29.0 -1.9 36 12-47 174-209 (402)
350 cd00248 Mth938-like Mth938-lik 24.6 1.5E+02 0.0032 18.4 3.5 36 114-149 53-88 (109)
351 PRK08293 3-hydroxybutyryl-CoA 24.0 73 0.0016 23.6 2.4 22 13-34 3-25 (287)
352 KOG2800 Conserved developmenta 23.6 42 0.00091 25.4 1.0 30 2-31 245-274 (389)
353 PF01339 CheB_methylest: CheB 23.6 61 0.0013 22.3 1.8 20 16-35 1-20 (182)
354 PF10432 bact-PGI_C: Bacterial 23.6 1.1E+02 0.0023 20.5 2.9 41 115-156 19-60 (155)
355 TIGR01544 HAD-SF-IE haloacid d 23.2 66 0.0014 24.0 1.9 18 11-28 209-226 (277)
356 PF09949 DUF2183: Uncharacteri 22.7 1.1E+02 0.0025 18.7 2.7 36 9-50 60-97 (100)
357 PF13676 TIR_2: TIR domain; PD 22.6 1.8E+02 0.0038 17.3 3.6 26 115-142 1-26 (102)
358 COG3621 Patatin [General funct 22.0 62 0.0014 24.9 1.6 20 17-36 45-64 (394)
359 cd01714 ETF_beta The electron 21.6 44 0.00095 23.4 0.8 23 14-36 109-135 (202)
360 COG2267 PldB Lysophospholipase 21.5 3.6E+02 0.0078 20.2 6.0 61 115-184 37-98 (298)
361 PF06658 DUF1168: Protein of u 21.4 26 0.00056 23.1 -0.4 14 17-30 25-38 (142)
362 PF07992 Pyr_redox_2: Pyridine 21.4 1.7E+02 0.0038 19.7 3.8 21 15-35 1-21 (201)
363 PF01380 SIS: SIS domain SIS d 21.3 1.7E+02 0.0036 18.2 3.5 24 12-35 4-27 (131)
364 COG2201 CheB Chemotaxis respon 20.9 1.2E+02 0.0026 23.6 2.9 24 12-35 155-178 (350)
365 KOG0256 1-aminocyclopropane-1- 20.4 4.6E+02 0.01 21.1 8.5 24 12-35 145-168 (471)
366 PRK13512 coenzyme A disulfide 20.3 1.1E+02 0.0025 24.2 2.9 22 14-35 2-23 (438)
367 cd07223 Pat_PNPLA5-mammals Pat 20.3 81 0.0017 24.9 2.0 18 16-33 43-60 (405)
No 1
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.93 E-value=1.2e-24 Score=160.20 Aligned_cols=176 Identities=36% Similarity=0.596 Sum_probs=144.5
Q ss_pred cccccccc------CCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCccccc--CCCCCCCc
Q 038786 3 ENNWLTEH------VDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELE--NPQSPLLT 74 (186)
Q Consensus 3 ~l~~l~~~------~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~--~~~~~~~~ 74 (186)
|+.|+.++ .|++||+|+|+|+||+||..++++..+....+.++++.|+++|++.......+..+ ....+...
T Consensus 149 Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~ 228 (336)
T KOG1515|consen 149 ALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELA 228 (336)
T ss_pred HHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchh
Confidence 45555554 59999999999999999999999987654446789999999999988776555444 33445666
Q ss_pred HHHHHHHHHhcCCCCC-CCCCCCcCCCC-CCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCC
Q 038786 75 LDMVDKFLSFALPLNS-DKGHPYTCPMG-PAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMG 152 (186)
Q Consensus 75 ~~~~~~~~~~~~~~~~-~~~~~~~~p~~-~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 152 (186)
......+|..+++... ...+++++|.. -.........+||+|+++++.|.+.+++..++++|++.|+++++.+++++.
T Consensus 229 ~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~ 308 (336)
T KOG1515|consen 229 RPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGF 308 (336)
T ss_pred HHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCe
Confidence 7788888888888888 79999999987 323345567788999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 153 HSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 153 H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
|+++..... .+.+.++++.+.+|+++
T Consensus 309 H~~~~~~~~-------~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 309 HGFHILDPS-------SKEAHALMDAIVEFIKS 334 (336)
T ss_pred eEEEecCCc-------hhhHHHHHHHHHHHHhh
Confidence 999985431 26789999999999986
No 2
>PRK10162 acetyl esterase; Provisional
Probab=99.93 E-value=5.7e-25 Score=163.42 Aligned_cols=172 Identities=18% Similarity=0.225 Sum_probs=131.8
Q ss_pred cccccccccC-----CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCC-CCCcH
Q 038786 2 RENNWLTEHV-----DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQS-PLLTL 75 (186)
Q Consensus 2 ~~l~~l~~~~-----~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~-~~~~~ 75 (186)
.+++|+.++. +.++|+|+|+|+||++|+.++.+..+.+..+..++++++++|+++.... .+...+... ..++.
T Consensus 137 ~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~-~s~~~~~~~~~~l~~ 215 (318)
T PRK10162 137 AVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDS-VSRRLLGGVWDGLTQ 215 (318)
T ss_pred HHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCC-hhHHHhCCCccccCH
Confidence 3577887652 6789999999999999999998876654444679999999999875422 222222222 24677
Q ss_pred HHHHHHHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccc
Q 038786 76 DMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSF 155 (186)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 155 (186)
..+.++++.|++......+++.+|... .+. ..+||++|++|+.|++++++..++++|++.|+++++++++|+.|+|
T Consensus 216 ~~~~~~~~~y~~~~~~~~~p~~~p~~~---~l~-~~lPp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f 291 (318)
T PRK10162 216 QDLQMYEEAYLSNDADRESPYYCLFNN---DLT-RDVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAF 291 (318)
T ss_pred HHHHHHHHHhCCCccccCCcccCcchh---hhh-cCCCCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceeh
Confidence 788889998887655566677777532 231 2378999999999999999999999999999999999999999999
Q ss_pred cccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 156 YLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
...... .+...+.++.+.+||++
T Consensus 292 ~~~~~~-------~~~a~~~~~~~~~~l~~ 314 (318)
T PRK10162 292 LHYSRM-------MDTADDALRDGAQFFTA 314 (318)
T ss_pred hhccCc-------hHHHHHHHHHHHHHHHH
Confidence 864321 16788899999999975
No 3
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.90 E-value=8.6e-24 Score=148.75 Aligned_cols=148 Identities=35% Similarity=0.584 Sum_probs=119.7
Q ss_pred ccccccccc-----CCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCC-CCCCccc---ccCCCCCC
Q 038786 2 RENNWLTEH-----VDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLR-QERSKSE---LENPQSPL 72 (186)
Q Consensus 2 ~~l~~l~~~-----~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~-~~~~~~~---~~~~~~~~ 72 (186)
++++|+.++ .|.++|+|+|+|+||++|+.++.+..+.+. ..++++++++|+.+. .....+. ......++
T Consensus 54 ~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~--~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~ 131 (211)
T PF07859_consen 54 AAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGL--PKPKGIILISPWTDLQDFDGPSYDDSNENKDDPF 131 (211)
T ss_dssp HHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTT--CHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSS
T ss_pred cceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcc--cchhhhhcccccccchhccccccccccccccccc
Confidence 578899988 689999999999999999999998866542 259999999999877 3333333 22345567
Q ss_pred CcHHHHHHHHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCC
Q 038786 73 LTLDMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMG 152 (186)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 152 (186)
++...+..+++.+.+ .....++.++|+.. . .+ ...||+++++|+.|.+++++..|+++|++.|+++++++++|+.
T Consensus 132 ~~~~~~~~~~~~~~~-~~~~~~~~~sp~~~-~-~~--~~~Pp~~i~~g~~D~l~~~~~~~~~~L~~~gv~v~~~~~~g~~ 206 (211)
T PF07859_consen 132 LPAPKIDWFWKLYLP-GSDRDDPLASPLNA-S-DL--KGLPPTLIIHGEDDVLVDDSLRFAEKLKKAGVDVELHVYPGMP 206 (211)
T ss_dssp SBHHHHHHHHHHHHS-TGGTTSTTTSGGGS-S-CC--TTCHEEEEEEETTSTTHHHHHHHHHHHHHTT-EEEEEEETTEE
T ss_pred ccccccccccccccc-cccccccccccccc-c-cc--ccCCCeeeeccccccchHHHHHHHHHHHHCCCCEEEEEECCCe
Confidence 778888888888875 55566788888765 1 24 3388999999999999999999999999999999999999999
Q ss_pred cccc
Q 038786 153 HSFY 156 (186)
Q Consensus 153 H~~~ 156 (186)
|.|.
T Consensus 207 H~f~ 210 (211)
T PF07859_consen 207 HGFF 210 (211)
T ss_dssp TTGG
T ss_pred EEee
Confidence 9986
No 4
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.89 E-value=8.3e-22 Score=146.43 Aligned_cols=168 Identities=29% Similarity=0.402 Sum_probs=134.0
Q ss_pred cccccccccC-----CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHH
Q 038786 2 RENNWLTEHV-----DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLD 76 (186)
Q Consensus 2 ~~l~~l~~~~-----~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~ 76 (186)
+++.|+.++. |+++|+|+|+|+||++|+.+++...+.+. ..+.+.++++|+++......+.........+...
T Consensus 135 ~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~--~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~~ 212 (312)
T COG0657 135 AAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGL--PLPAAQVLISPLLDLTSSAASLPGYGEADLLDAA 212 (312)
T ss_pred HHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCC--CCceEEEEEecccCCcccccchhhcCCccccCHH
Confidence 4678888774 79999999999999999999998866432 3689999999999887644444455555566666
Q ss_pred HHH-HHHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccc
Q 038786 77 MVD-KFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSF 155 (186)
Q Consensus 77 ~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 155 (186)
.+. ++...|.........+..+|+.... +.+ +||+++++|+.|++.+++..++++|.+.|+++++.+++++.|.|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~p~~spl~~~~--~~~--lPP~~i~~a~~D~l~~~~~~~a~~L~~agv~~~~~~~~g~~H~f 288 (312)
T COG0657 213 AILAWFADLYLGAAPDREDPEASPLASDD--LSG--LPPTLIQTAEFDPLRDEGEAYAERLRAAGVPVELRVYPGMIHGF 288 (312)
T ss_pred HHHHHHHHHhCcCccccCCCccCcccccc--ccC--CCCEEEEecCCCcchhHHHHHHHHHHHcCCeEEEEEeCCcceec
Confidence 555 7888887766666668888887543 433 88999999999999999999999999999999999999999999
Q ss_pred cccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 156 YLDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
..... +...+.+..+.+|++
T Consensus 289 ~~~~~---------~~a~~~~~~~~~~l~ 308 (312)
T COG0657 289 DLLTG---------PEARSALRQIAAFLR 308 (312)
T ss_pred cccCc---------HHHHHHHHHHHHHHH
Confidence 66432 456666888888876
No 5
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.83 E-value=3.7e-20 Score=130.47 Aligned_cols=155 Identities=25% Similarity=0.338 Sum_probs=102.9
Q ss_pred cccccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHH
Q 038786 2 RENNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVD 79 (186)
Q Consensus 2 ~~l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (186)
++++|+.++. |++||+|+|+|+||++++.++.++ |+.+++++..+|+.+.......... -...
T Consensus 50 ~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~------~~~f~a~v~~~g~~d~~~~~~~~~~---------~~~~ 114 (213)
T PF00326_consen 50 AAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQH------PDRFKAAVAGAGVSDLFSYYGTTDI---------YTKA 114 (213)
T ss_dssp HHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHT------CCGSSEEEEESE-SSTTCSBHHTCC---------HHHG
T ss_pred HHHHHHhccccccceeEEEEcccccccccchhhccc------ceeeeeeeccceecchhcccccccc---------cccc
Confidence 3567776664 889999999999999999999977 7789999999999876543222100 0000
Q ss_pred HHHHhcCCCCCCCCCCCcCCCCCCCCCCCCC-CCCCEEEEeeCcccccc--cHHHHHHHHHHCCCceEEEEeCCCCcccc
Q 038786 80 KFLSFALPLNSDKGHPYTCPMGPAGPPIDGL-KLPPFLLCVAGNDLIKD--TEMEYYEAMKKAGKDVELLVSPGMGHSFY 156 (186)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 156 (186)
.+...-.+..........+|... +... ..||+|++||++|..++ .+..+.++|++.+.++++.++|+++|.+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~s~~~~----~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~ 190 (213)
T PF00326_consen 115 EYLEYGDPWDNPEFYRELSPISP----ADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG 190 (213)
T ss_dssp HHHHHSSTTTSHHHHHHHHHGGG----GGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT
T ss_pred cccccCccchhhhhhhhhccccc----cccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC
Confidence 01110000000000011222211 1110 23499999999998876 57899999999999999999999999776
Q ss_pred ccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 157 LDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
.. +...+..+.+.+||+++
T Consensus 191 ~~-----------~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 191 NP-----------ENRRDWYERILDFFDKY 209 (213)
T ss_dssp SH-----------HHHHHHHHHHHHHHHHH
T ss_pred Cc-----------hhHHHHHHHHHHHHHHH
Confidence 53 45668999999999863
No 6
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.70 E-value=5.9e-17 Score=119.49 Aligned_cols=161 Identities=20% Similarity=0.154 Sum_probs=95.9
Q ss_pred ccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCC--Ccc-cc-------cCCCCC---
Q 038786 5 NWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQER--SKS-EL-------ENPQSP--- 71 (186)
Q Consensus 5 ~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~--~~~-~~-------~~~~~~--- 71 (186)
.-+.++.+.++++|+||||||.+++.++.++ |++++++|+++|....... .+. .. ......
T Consensus 93 ~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~------p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (294)
T PLN02824 93 NDFCSDVVGDPAFVICNSVGGVVGLQAAVDA------PELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVG 166 (294)
T ss_pred HHHHHHhcCCCeEEEEeCHHHHHHHHHHHhC------hhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHH
Confidence 3344455779999999999999999999988 7799999999986422110 000 00 000000
Q ss_pred ------CCcHHHHHHHHHhcCCCCCCCC--------------C---C---Cc--CCCCCCCCCCCCCCCCCEEEEeeCcc
Q 038786 72 ------LLTLDMVDKFLSFALPLNSDKG--------------H---P---YT--CPMGPAGPPIDGLKLPPFLLCVAGND 123 (186)
Q Consensus 72 ------~~~~~~~~~~~~~~~~~~~~~~--------------~---~---~~--~p~~~~~~~~~~~~~pP~li~~g~~D 123 (186)
.........++........... . . .. .........+..+++ |+|+++|++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lvi~G~~D 245 (294)
T PLN02824 167 KAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKC-PVLIAWGEKD 245 (294)
T ss_pred HHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCC-CeEEEEecCC
Confidence 0000011111111111000000 0 0 00 000001123445566 9999999999
Q ss_pred cccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 124 LIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 124 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
.+++. ..++.+.+.....+++++++++|..+. ++++++.+.|.+|++++
T Consensus 246 ~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~~------------e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 246 PWEPV--ELGRAYANFDAVEDFIVLPGVGHCPQD------------EAPELVNPLIESFVARH 294 (294)
T ss_pred CCCCh--HHHHHHHhcCCccceEEeCCCCCChhh------------hCHHHHHHHHHHHHhcC
Confidence 98653 345556666666799999999999887 78999999999999875
No 7
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.69 E-value=3.4e-16 Score=114.36 Aligned_cols=136 Identities=18% Similarity=0.178 Sum_probs=94.6
Q ss_pred CCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCC
Q 038786 11 VDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNS 90 (186)
Q Consensus 11 ~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (186)
.+.++++|+||||||.+|+.++.++ |+.++++++++|+.+.... .. . ......++....
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~------p~~~~~~~~~~~~~~~~~~----------~~-~----~~~~~~~l~~~~ 193 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKN------PDRFKSVSAFAPIVAPSRC----------PW-G----QKAFSAYLGADE 193 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhC------cccceEEEEECCccCcccC----------cc-h----HHHHHHHhcccc
Confidence 3778999999999999999999988 7789999999999764210 00 0 112222332211
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCccccccc---HHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcc
Q 038786 91 DKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDT---EMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPN 167 (186)
Q Consensus 91 ~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 167 (186)
.. ....+|.... ... ...||+++.+|+.|.+++. ...+.+.+++.+.++++.++||++|.|..
T Consensus 194 ~~-~~~~~~~~~~-~~~--~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~---------- 259 (275)
T TIGR02821 194 AA-WRSYDASLLV-ADG--GRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF---------- 259 (275)
T ss_pred cc-hhhcchHHHH-hhc--ccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchh----------
Confidence 11 1111221110 111 1246999999999988875 36899999999999999999999999976
Q ss_pred hhHHHHHHHHHHHHHhhh
Q 038786 168 TAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 168 ~~~~~~~~~~~i~~fl~~ 185 (186)
....+...++|+.+
T Consensus 260 ----~~~~~~~~~~~~~~ 273 (275)
T TIGR02821 260 ----IASFIADHLRHHAE 273 (275)
T ss_pred ----HHHhHHHHHHHHHh
Confidence 66677777887765
No 8
>PRK10749 lysophospholipase L2; Provisional
Probab=99.68 E-value=5.8e-16 Score=116.00 Aligned_cols=159 Identities=20% Similarity=0.214 Sum_probs=94.4
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccc--------c---------------CC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSEL--------E---------------NP 68 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~--------~---------------~~ 68 (186)
+..+++++||||||.+++.++.++ |+.++++|+++|+.......+... . ..
T Consensus 129 ~~~~~~l~GhSmGG~ia~~~a~~~------p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (330)
T PRK10749 129 PYRKRYALAHSMGGAILTLFLQRH------PGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWR 202 (330)
T ss_pred CCCCeEEEEEcHHHHHHHHHHHhC------CCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCC
Confidence 567999999999999999999987 678999999999764321111000 0 00
Q ss_pred CCC----CC--cHHHHHHHHHhcCCCCCCCC-CCC---cCCC-C---CCCCCCCCCCCCCEEEEeeCccccccc--HHHH
Q 038786 69 QSP----LL--TLDMVDKFLSFALPLNSDKG-HPY---TCPM-G---PAGPPIDGLKLPPFLLCVAGNDLIKDT--EMEY 132 (186)
Q Consensus 69 ~~~----~~--~~~~~~~~~~~~~~~~~~~~-~~~---~~p~-~---~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~ 132 (186)
... .+ .......+.+.+........ ... .... . .....+..++. |+|+++|++|.+++. ...+
T Consensus 203 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~Lii~G~~D~vv~~~~~~~~ 281 (330)
T PRK10749 203 PLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITT-PLLLLQAEEERVVDNRMHDRF 281 (330)
T ss_pred CCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCC-CEEEEEeCCCeeeCHHHHHHH
Confidence 000 00 11121222222211110000 000 0000 0 00122344556 999999999999874 3556
Q ss_pred HHHHHHCC---CceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 133 YEAMKKAG---KDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 133 ~~~l~~~~---~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
++.+...+ .+.+++++||++|....... ...++++++|.+||+++
T Consensus 282 ~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~---------~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 282 CEARTAAGHPCEGGKPLVIKGAYHEILFEKD---------AMRSVALNAIVDFFNRH 329 (330)
T ss_pred HHHHhhcCCCCCCceEEEeCCCcchhhhCCc---------HHHHHHHHHHHHHHhhc
Confidence 66666543 35689999999999987421 34788999999999874
No 9
>PHA02857 monoglyceride lipase; Provisional
Probab=99.67 E-value=3.4e-16 Score=114.43 Aligned_cols=156 Identities=16% Similarity=0.151 Sum_probs=88.6
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCccc------cc-CCCCCC---CcHHHH---
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSE------LE-NPQSPL---LTLDMV--- 78 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~------~~-~~~~~~---~~~~~~--- 78 (186)
..++++|+||||||.+|+.++.+. |+.++++|+++|........... .. ...... ......
T Consensus 95 ~~~~~~lvG~S~GG~ia~~~a~~~------p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (276)
T PHA02857 95 PGVPVFLLGHSMGATISILAAYKN------PNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPESVSRD 168 (276)
T ss_pred CCCCEEEEEcCchHHHHHHHHHhC------ccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCHhhccCC
Confidence 446899999999999999999877 66899999999976532110000 00 000000 000000
Q ss_pred -HHHHHhcCCCCCCCCCC----CcCCC----CCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHH-HCCCceEEEEe
Q 038786 79 -DKFLSFALPLNSDKGHP----YTCPM----GPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMK-KAGKDVELLVS 148 (186)
Q Consensus 79 -~~~~~~~~~~~~~~~~~----~~~p~----~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~-~~~~~~~~~~~ 148 (186)
..... +.......... +.... ......+..+++ |+|+++|++|.+++.. ..+.+. ..+.+++++++
T Consensus 169 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvliv~G~~D~i~~~~--~~~~l~~~~~~~~~~~~~ 244 (276)
T PHA02857 169 MDEVYK-YQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKT-PILILQGTNNEISDVS--GAYYFMQHANCNREIKIY 244 (276)
T ss_pred HHHHHH-HhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCC-CEEEEecCCCCcCChH--HHHHHHHHccCCceEEEe
Confidence 00000 10000000000 00000 000123455666 9999999999997632 223332 23336899999
Q ss_pred CCCCccccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 149 PGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 149 ~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
++++|....+.. +..+++++++.+||+++
T Consensus 245 ~~~gH~~~~e~~---------~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 245 EGAKHHLHKETD---------EVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCCcccccCCch---------hHHHHHHHHHHHHHHHh
Confidence 999999987421 45889999999999863
No 10
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.67 E-value=2.4e-16 Score=126.64 Aligned_cols=151 Identities=23% Similarity=0.260 Sum_probs=103.9
Q ss_pred ccccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHH
Q 038786 3 ENNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDK 80 (186)
Q Consensus 3 ~l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (186)
+++|+.+.. |.+|++|+|+|.||.+++..+.+. + .+++.+..++..+........... ....
T Consensus 460 ~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~------~-~f~a~~~~~~~~~~~~~~~~~~~~---------~~~~ 523 (620)
T COG1506 460 AVDALVKLPLVDPERIGITGGSYGGYMTLLAATKT------P-RFKAAVAVAGGVDWLLYFGESTEG---------LRFD 523 (620)
T ss_pred HHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcC------c-hhheEEeccCcchhhhhccccchh---------hcCC
Confidence 455666655 888999999999999999999877 4 788888888766543221111110 0000
Q ss_pred HHHhcCCCC--CCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccc--cHHHHHHHHHHCCCceEEEEeCCCCcccc
Q 038786 81 FLSFALPLN--SDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKD--TEMEYYEAMKKAGKDVELLVSPGMGHSFY 156 (186)
Q Consensus 81 ~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 156 (186)
... ..... ........+|+.. ...++. |+|++||++|.-++ ++..+..+|+..|.++++++||+.+|.+.
T Consensus 524 ~~~-~~~~~~~~~~~~~~~sp~~~----~~~i~~-P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~ 597 (620)
T COG1506 524 PEE-NGGGPPEDREKYEDRSPIFY----ADNIKT-PLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFS 597 (620)
T ss_pred HHH-hCCCcccChHHHHhcChhhh----hcccCC-CEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCC
Confidence 000 00000 1122334455443 223334 99999999997766 68999999999999999999999999998
Q ss_pred ccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 157 LDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
.. +...+.++.+.+|++++
T Consensus 598 ~~-----------~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 598 RP-----------ENRVKVLKEILDWFKRH 616 (620)
T ss_pred Cc-----------hhHHHHHHHHHHHHHHH
Confidence 73 56788999999999864
No 11
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.66 E-value=7.3e-16 Score=110.03 Aligned_cols=149 Identities=24% Similarity=0.314 Sum_probs=94.5
Q ss_pred CCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCC-----
Q 038786 13 FQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALP----- 87 (186)
Q Consensus 13 ~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 87 (186)
--..+++||||||.+++.++.+. |..+.|+|+++|+........... . ...+-.....+++
T Consensus 128 ~lp~FL~GeSMGGAV~Ll~~~k~------p~~w~G~ilvaPmc~i~~~~kp~p------~--v~~~l~~l~~liP~wk~v 193 (313)
T KOG1455|consen 128 GLPRFLFGESMGGAVALLIALKD------PNFWDGAILVAPMCKISEDTKPHP------P--VISILTLLSKLIPTWKIV 193 (313)
T ss_pred CCCeeeeecCcchHHHHHHHhhC------CcccccceeeecccccCCccCCCc------H--HHHHHHHHHHhCCceeec
Confidence 34789999999999999999986 778999999999976543221110 0 0000000000000
Q ss_pred -CC--------------CCCCCCCcCCCC--------------CCCCCCCCCCCCCEEEEeeCccccccc--HHHHHHHH
Q 038786 88 -LN--------------SDKGHPYTCPMG--------------PAGPPIDGLKLPPFLLCVAGNDLIKDT--EMEYYEAM 136 (186)
Q Consensus 88 -~~--------------~~~~~~~~~p~~--------------~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l 136 (186)
.+ ....++.+.... ....++..+.+ |.||+||++|.+++. ++++.+..
T Consensus 194 p~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtv-PflilHG~dD~VTDp~~Sk~Lye~A 272 (313)
T KOG1455|consen 194 PTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTV-PFLILHGTDDKVTDPKVSKELYEKA 272 (313)
T ss_pred CCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccc-cEEEEecCCCcccCcHHHHHHHHhc
Confidence 00 011122222111 11334556667 999999999999874 34554433
Q ss_pred HHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 137 KKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 137 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
. ..+.++++|||+-|....-... +..+.++.+|.+||+++
T Consensus 273 ~--S~DKTlKlYpGm~H~Ll~gE~~--------en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 273 S--SSDKTLKLYPGMWHSLLSGEPD--------ENVEIVFGDIISWLDER 312 (313)
T ss_pred c--CCCCceeccccHHHHhhcCCCc--------hhHHHHHHHHHHHHHhc
Confidence 3 4578999999999999862211 78999999999999874
No 12
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.66 E-value=1.2e-15 Score=107.84 Aligned_cols=112 Identities=27% Similarity=0.387 Sum_probs=79.2
Q ss_pred CCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCC
Q 038786 11 VDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNS 90 (186)
Q Consensus 11 ~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (186)
.+.+||+|+|+|.||.+|+.++.++ |..+.+++++++.+........
T Consensus 102 i~~~ri~l~GFSQGa~~al~~~l~~------p~~~~gvv~lsG~~~~~~~~~~--------------------------- 148 (216)
T PF02230_consen 102 IDPSRIFLGGFSQGAAMALYLALRY------PEPLAGVVALSGYLPPESELED--------------------------- 148 (216)
T ss_dssp --GGGEEEEEETHHHHHHHHHHHCT------SSTSSEEEEES---TTGCCCHC---------------------------
T ss_pred CChhheehhhhhhHHHHHHHHHHHc------CcCcCEEEEeeccccccccccc---------------------------
Confidence 4888999999999999999999977 7789999999998643211000
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCccccccc--HHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcch
Q 038786 91 DKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDT--EMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNT 168 (186)
Q Consensus 91 ~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 168 (186)
.. .... ++ |++++||+.|+++|. .+...+.|++.+.++++++|+|++|..
T Consensus 149 -----~~-------~~~~--~~-pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i------------- 200 (216)
T PF02230_consen 149 -----RP-------EALA--KT-PILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI------------- 200 (216)
T ss_dssp -----CH-------CCCC--TS--EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--------------
T ss_pred -----cc-------cccC--CC-cEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC-------------
Confidence 00 0011 23 999999999999884 578888999999999999999999988
Q ss_pred hHHHHHHHHHHHHHhhhC
Q 038786 169 AAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 169 ~~~~~~~~~~i~~fl~~~ 186 (186)
..+.++++.+||+++
T Consensus 201 ---~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 201 ---SPEELRDLREFLEKH 215 (216)
T ss_dssp ----HHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHhhh
Confidence 345677888998763
No 13
>PLN02965 Probable pheophorbidase
Probab=99.64 E-value=3.7e-15 Score=107.81 Aligned_cols=161 Identities=17% Similarity=0.136 Sum_probs=93.9
Q ss_pred cccccccCCC-CceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCC--CCcccc----------cC---
Q 038786 4 NNWLTEHVDF-QRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQE--RSKSEL----------EN--- 67 (186)
Q Consensus 4 l~~l~~~~~~-~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~--~~~~~~----------~~--- 67 (186)
+..+.+..+. ++++++||||||.+++.++.++ |++++++|++++...... ...... ..
T Consensus 61 l~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (255)
T PLN02965 61 LFALLSDLPPDHKVILVGHSIGGGSVTEALCKF------TDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFG 134 (255)
T ss_pred HHHHHHhcCCCCCEEEEecCcchHHHHHHHHhC------chheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeec
Confidence 3344455555 5999999999999999999988 779999999887521110 000000 00
Q ss_pred -CCCCCCcHHHH-HHHHHh-cCCCCC------------CCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHH
Q 038786 68 -PQSPLLTLDMV-DKFLSF-ALPLNS------------DKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEY 132 (186)
Q Consensus 68 -~~~~~~~~~~~-~~~~~~-~~~~~~------------~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~ 132 (186)
..........+ ..+... ++.... ................+..+++ |+++++|++|.+++. ..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-P~lvi~g~~D~~~~~--~~ 211 (255)
T PLN02965 135 EGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKV-PRVYIKTAKDNLFDP--VR 211 (255)
T ss_pred cCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCC-CEEEEEcCCCCCCCH--HH
Confidence 00000000000 011111 111000 0000000000001112334566 999999999998754 55
Q ss_pred HHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 133 YEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 133 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
.+.+.+.....+++++++++|.+.. ++++++.+.+.+|++.
T Consensus 212 ~~~~~~~~~~a~~~~i~~~GH~~~~------------e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 212 QDVMVENWPPAQTYVLEDSDHSAFF------------SVPTTLFQYLLQAVSS 252 (255)
T ss_pred HHHHHHhCCcceEEEecCCCCchhh------------cCHHHHHHHHHHHHHH
Confidence 6677776667899999999999988 7789999999998764
No 14
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.64 E-value=1.5e-15 Score=111.14 Aligned_cols=161 Identities=17% Similarity=0.165 Sum_probs=94.7
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCC---c-----ccccCCCCC----
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERS---K-----SELENPQSP---- 71 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~---~-----~~~~~~~~~---- 71 (186)
+..+.++.+.++++++||||||.+++.++.++ |++++++++++|........ + .........
T Consensus 91 l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (282)
T TIGR03343 91 VKGLMDALDIEKAHLVGNSMGGATALNFALEY------PDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYET 164 (282)
T ss_pred HHHHHHHcCCCCeeEEEECchHHHHHHHHHhC------hHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHH
Confidence 33445566889999999999999999999988 77899999998753211100 0 000000000
Q ss_pred -------------CCcHHHHHHHHHhcCCCCCC----CCCCCcCCC--CCCCCCCCCCCCCCEEEEeeCcccccccHHHH
Q 038786 72 -------------LLTLDMVDKFLSFALPLNSD----KGHPYTCPM--GPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEY 132 (186)
Q Consensus 72 -------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~--~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~ 132 (186)
..+.......+......... .......+. ......+..+++ |+|+++|++|.+++. ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlli~G~~D~~v~~--~~ 241 (282)
T TIGR03343 165 LKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKA-KTLVTWGRDDRFVPL--DH 241 (282)
T ss_pred HHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCC-CEEEEEccCCCcCCc--hh
Confidence 00000000000000000000 000000000 001122445667 999999999998753 44
Q ss_pred HHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 133 YEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 133 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
++.+.+...+++++++++++|.... +.++++.+.|.+|+++
T Consensus 242 ~~~~~~~~~~~~~~~i~~agH~~~~------------e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 242 GLKLLWNMPDAQLHVFSRCGHWAQW------------EHADAFNRLVIDFLRN 282 (282)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCcc------------cCHHHHHHHHHHHhhC
Confidence 5556665567899999999999988 7799999999999963
No 15
>PLN02442 S-formylglutathione hydrolase
Probab=99.63 E-value=3.6e-15 Score=109.35 Aligned_cols=123 Identities=18% Similarity=0.210 Sum_probs=83.0
Q ss_pred CCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCC
Q 038786 11 VDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNS 90 (186)
Q Consensus 11 ~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (186)
.+.++++|+||||||.+|+.++.++ |+.++++++++|..+..... . .... ...+++...
T Consensus 140 ~~~~~~~i~G~S~GG~~a~~~a~~~------p~~~~~~~~~~~~~~~~~~~----------~-~~~~----~~~~~g~~~ 198 (283)
T PLN02442 140 LDTSRASIFGHSMGGHGALTIYLKN------PDKYKSVSAFAPIANPINCP----------W-GQKA----FTNYLGSDK 198 (283)
T ss_pred cCCCceEEEEEChhHHHHHHHHHhC------chhEEEEEEECCccCcccCc----------h-hhHH----HHHHcCCCh
Confidence 4789999999999999999999987 77899999999987643110 0 0011 111222111
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCccccccc---HHHHHHHHHHCCCceEEEEeCCCCccccc
Q 038786 91 DKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDT---EMEYYEAMKKAGKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 91 ~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 157 (186)
. ......|... ...+...+. |+++++|++|.+++. +..+.+.+++.+.+++++++||++|.|..
T Consensus 199 ~-~~~~~d~~~~-~~~~~~~~~-pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~~ 265 (283)
T PLN02442 199 A-DWEEYDATEL-VSKFNDVSA-TILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYFF 265 (283)
T ss_pred h-hHHHcChhhh-hhhccccCC-CEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHHH
Confidence 0 0000111110 111222234 999999999988874 57899999999999999999999999865
No 16
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.62 E-value=1.5e-15 Score=115.05 Aligned_cols=66 Identities=18% Similarity=0.302 Sum_probs=53.4
Q ss_pred CCCCCCCCEEEEeeCcccccccHH---HHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHh
Q 038786 107 IDGLKLPPFLLCVAGNDLIKDTEM---EYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFM 183 (186)
Q Consensus 107 ~~~~~~pP~li~~g~~D~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 183 (186)
+..+++ |+|+++|++|.+++... .+.+.+.+...+++++++++++|..+. ++++++.+.|.+||
T Consensus 288 l~~i~~-PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~------------E~Pe~~~~~I~~FL 354 (360)
T PLN02679 288 IPRISL-PILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHD------------DRPDLVHEKLLPWL 354 (360)
T ss_pred hhhcCC-CEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccc------------cCHHHHHHHHHHHH
Confidence 445566 99999999998876542 345566666667999999999999877 78999999999999
Q ss_pred hh
Q 038786 184 RK 185 (186)
Q Consensus 184 ~~ 185 (186)
++
T Consensus 355 ~~ 356 (360)
T PLN02679 355 AQ 356 (360)
T ss_pred Hh
Confidence 75
No 17
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.62 E-value=4.6e-15 Score=109.86 Aligned_cols=160 Identities=18% Similarity=0.162 Sum_probs=90.6
Q ss_pred ccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCC-Ccc----cccCC-C---------
Q 038786 5 NWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQER-SKS----ELENP-Q--------- 69 (186)
Q Consensus 5 ~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~-~~~----~~~~~-~--------- 69 (186)
.-+.++.+.++++++||||||.+|+.++.++ |+.+++++++++....... ... ..... .
T Consensus 106 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (302)
T PRK00870 106 RSWFEQLDLTDVTLVCQDWGGLIGLRLAAEH------PDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRL 179 (302)
T ss_pred HHHHHHcCCCCEEEEEEChHHHHHHHHHHhC------hhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHH
Confidence 3344556788999999999999999999987 6789999999875321110 000 00000 0
Q ss_pred -----CCCCcHHHHHHHHHhcCCCC--CC-CCCCCc---CC---CCC----CCCCCCCCCCCCEEEEeeCcccccccHHH
Q 038786 70 -----SPLLTLDMVDKFLSFALPLN--SD-KGHPYT---CP---MGP----AGPPIDGLKLPPFLLCVAGNDLIKDTEME 131 (186)
Q Consensus 70 -----~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~---~p---~~~----~~~~~~~~~~pP~li~~g~~D~~~~~~~~ 131 (186)
....+......+...+.... .. ...... .+ ... ....+..+++ |+++++|+.|.+++...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~~~~~~- 257 (302)
T PRK00870 180 VNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDK-PFLTAFSDSDPITGGGD- 257 (302)
T ss_pred hhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCC-ceEEEecCCCCcccCch-
Confidence 00011111111111000000 00 000000 00 000 0012345566 99999999998876422
Q ss_pred HHHHHHHCCCce---EEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 132 YYEAMKKAGKDV---ELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 132 ~~~~l~~~~~~~---~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
+.+.+..... ++.++++++|.... +.++++.+.+.+|++++
T Consensus 258 --~~~~~~~~~~~~~~~~~i~~~gH~~~~------------e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 258 --AILQKRIPGAAGQPHPTIKGAGHFLQE------------DSGEELAEAVLEFIRAT 301 (302)
T ss_pred --HHHHhhcccccccceeeecCCCccchh------------hChHHHHHHHHHHHhcC
Confidence 3344432223 47899999999877 77899999999999864
No 18
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.61 E-value=3e-15 Score=110.44 Aligned_cols=162 Identities=15% Similarity=0.031 Sum_probs=92.7
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCC--Cc-c---ccc-CCCC---C--
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQER--SK-S---ELE-NPQS---P-- 71 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~--~~-~---~~~-~~~~---~-- 71 (186)
+..+.++.+.++++++||||||.+|+.++.++ |+++++++++++....... .. . ... .... .
T Consensus 83 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~------p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (295)
T PRK03592 83 LDAWFDALGLDDVVLVGHDWGSALGFDWAARH------PDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEM 156 (295)
T ss_pred HHHHHHHhCCCCeEEEEECHHHHHHHHHHHhC------hhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCccccccc
Confidence 44455666789999999999999999999988 7899999999974322110 00 0 000 0000 0
Q ss_pred C------------------CcHHHHHHHHHhcCCCCCCC--CCC--CcCCC----------CCCCCCCCCCCCCCEEEEe
Q 038786 72 L------------------LTLDMVDKFLSFALPLNSDK--GHP--YTCPM----------GPAGPPIDGLKLPPFLLCV 119 (186)
Q Consensus 72 ~------------------~~~~~~~~~~~~~~~~~~~~--~~~--~~~p~----------~~~~~~~~~~~~pP~li~~ 119 (186)
. .+.+....+...+....... ... ...+. ......+..+++ |+|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~ 235 (295)
T PRK03592 157 VLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDV-PKLLIN 235 (295)
T ss_pred ccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCC-CeEEEe
Confidence 0 01111111111110000000 000 00000 000122344566 999999
Q ss_pred eCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 120 AGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 120 g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
|++|.+++. ....+.+.+.....+++++++++|.... +.++++.+.+.+|+++
T Consensus 236 G~~D~~~~~-~~~~~~~~~~~~~~~~~~i~~~gH~~~~------------e~p~~v~~~i~~fl~~ 288 (295)
T PRK03592 236 AEPGAILTT-GAIRDWCRSWPNQLEITVFGAGLHFAQE------------DSPEEIGAAIAAWLRR 288 (295)
T ss_pred ccCCcccCc-HHHHHHHHHhhhhcceeeccCcchhhhh------------cCHHHHHHHHHHHHHH
Confidence 999988732 1222333333345789999999999988 7799999999999975
No 19
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.61 E-value=1.4e-15 Score=109.83 Aligned_cols=158 Identities=16% Similarity=0.172 Sum_probs=92.2
Q ss_pred ccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCC-CCCC-CCcccc----cCCCCCCCcHHHHHH
Q 038786 7 LTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGF-LRQE-RSKSEL----ENPQSPLLTLDMVDK 80 (186)
Q Consensus 7 l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~-~~~~-~~~~~~----~~~~~~~~~~~~~~~ 80 (186)
+.+..+.++++|+||||||.+|+.++.++ |+++++++++++.. .+.. ...... ...............
T Consensus 74 ~l~~l~~~~~~lvGhS~Gg~va~~~a~~~------~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (255)
T PRK10673 74 TLDALQIEKATFIGHSMGGKAVMALTALA------PDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAA 147 (255)
T ss_pred HHHHcCCCceEEEEECHHHHHHHHHHHhC------HhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHH
Confidence 34445778899999999999999999877 67899999985421 1110 000000 000000011110001
Q ss_pred HHHhc-------------CCCCCCC-CCC----CcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCc
Q 038786 81 FLSFA-------------LPLNSDK-GHP----YTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKD 142 (186)
Q Consensus 81 ~~~~~-------------~~~~~~~-~~~----~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~ 142 (186)
.+... +...... ..+ ..... .....+..+++ |+|+++|++|..++ ....+.+.+...+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-P~l~i~G~~D~~~~--~~~~~~~~~~~~~ 223 (255)
T PRK10673 148 IMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHI-VGWEKIPAWPH-PALFIRGGNSPYVT--EAYRDDLLAQFPQ 223 (255)
T ss_pred HHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHH-hCCcccCCCCC-CeEEEECCCCCCCC--HHHHHHHHHhCCC
Confidence 11100 0000000 000 00000 00112333456 99999999998864 4666777777778
Q ss_pred eEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 143 VELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 143 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
+++.++++++|.+.. ++++++.+.+.+||+++
T Consensus 224 ~~~~~~~~~gH~~~~------------~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 224 ARAHVIAGAGHWVHA------------EKPDAVLRAIRRYLNDK 255 (255)
T ss_pred cEEEEeCCCCCeeec------------cCHHHHHHHHHHHHhcC
Confidence 899999999998877 67899999999999864
No 20
>PRK11460 putative hydrolase; Provisional
Probab=99.61 E-value=1.2e-14 Score=103.59 Aligned_cols=93 Identities=24% Similarity=0.251 Sum_probs=71.9
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSD 91 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (186)
+.++|+|+|+|+||.+++.++.+. |..+.+++.+++.+.. . +.
T Consensus 101 ~~~~i~l~GfS~Gg~~al~~a~~~------~~~~~~vv~~sg~~~~---------------------------~-~~--- 143 (232)
T PRK11460 101 GASATALIGFSQGAIMALEAVKAE------PGLAGRVIAFSGRYAS---------------------------L-PE--- 143 (232)
T ss_pred ChhhEEEEEECHHHHHHHHHHHhC------CCcceEEEEecccccc---------------------------c-cc---
Confidence 567999999999999999998866 5567778877764310 0 00
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccc--cHHHHHHHHHHCCCceEEEEeCCCCccccc
Q 038786 92 KGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKD--TEMEYYEAMKKAGKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 92 ~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 157 (186)
. + . . .+|+|++||++|.+++ ...++.+.|++.+.++++++|++++|.+..
T Consensus 144 -----~-~-------~--~-~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~ 195 (232)
T PRK11460 144 -----T-A-------P--T-ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDP 195 (232)
T ss_pred -----c-c-------c--C-CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCH
Confidence 0 0 0 1 2399999999999987 357888899998999999999999999954
No 21
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.61 E-value=1.5e-15 Score=111.07 Aligned_cols=157 Identities=17% Similarity=0.132 Sum_probs=90.8
Q ss_pred ccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCC--Ccccc--cCCCCCCCcH-----HH
Q 038786 7 LTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQER--SKSEL--ENPQSPLLTL-----DM 77 (186)
Q Consensus 7 l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~--~~~~~--~~~~~~~~~~-----~~ 77 (186)
+.++.+.++++|+||||||.+|+.+|.++ |++++++|++++....... .+... ......+... ..
T Consensus 84 ~i~~l~~~~~~LvG~S~GG~va~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (276)
T TIGR02240 84 MLDYLDYGQVNAIGVSWGGALAQQFAHDY------PERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIA 157 (276)
T ss_pred HHHHhCcCceEEEEECHHHHHHHHHHHHC------HHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchh
Confidence 44555788999999999999999999987 7789999999987542110 00000 0000000000 00
Q ss_pred HHHHHHhcCCCCC---------CCCCC--Cc---CC-C-CCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCC
Q 038786 78 VDKFLSFALPLNS---------DKGHP--YT---CP-M-GPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGK 141 (186)
Q Consensus 78 ~~~~~~~~~~~~~---------~~~~~--~~---~p-~-~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~ 141 (186)
...+...+..... ..... .. .. . ......+..+++ |+|+++|++|.+++. ...+.+.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~v~~--~~~~~l~~~~~ 234 (276)
T TIGR02240 158 PDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQ-PTLVLAGDDDPIIPL--INMRLLAWRIP 234 (276)
T ss_pred hhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCC-CEEEEEeCCCCcCCH--HHHHHHHHhCC
Confidence 0000000000000 00000 00 00 0 001123455667 999999999998753 33445555555
Q ss_pred ceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 142 DVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 142 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
..+++++++ +|.... ++++++.+.+.+|+++
T Consensus 235 ~~~~~~i~~-gH~~~~------------e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 235 NAELHIIDD-GHLFLI------------TRAEAVAPIIMKFLAE 265 (276)
T ss_pred CCEEEEEcC-CCchhh------------ccHHHHHHHHHHHHHH
Confidence 678888886 998877 7789999999999975
No 22
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.61 E-value=1.4e-14 Score=109.37 Aligned_cols=156 Identities=19% Similarity=0.203 Sum_probs=85.3
Q ss_pred CCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCC-c-ccc--------c---C----CCCCCC--
Q 038786 13 FQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERS-K-SEL--------E---N----PQSPLL-- 73 (186)
Q Consensus 13 ~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~-~-~~~--------~---~----~~~~~~-- 73 (186)
..+++|+||||||.+|+.++.++ |..++++|+++|+....... + ... . . ....+.
T Consensus 161 ~~~~~LvGhSmGG~val~~a~~~------p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 234 (349)
T PLN02385 161 GLPSFLFGQSMGGAVALKVHLKQ------PNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKLVPQKDLAEL 234 (349)
T ss_pred CCCEEEEEeccchHHHHHHHHhC------cchhhheeEecccccccccccCchHHHHHHHHHHHHCCCceecCCCccccc
Confidence 34799999999999999999987 77899999999976432110 0 000 0 0 000000
Q ss_pred --cHHHHHHHHHhcCCCCCCCCCCC------cCCCCCCCCCCCCCCCCCEEEEeeCcccccccH--HHHHHHHHHCCCce
Q 038786 74 --TLDMVDKFLSFALPLNSDKGHPY------TCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTE--MEYYEAMKKAGKDV 143 (186)
Q Consensus 74 --~~~~~~~~~~~~~~~~~~~~~~~------~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~--~~~~~~l~~~~~~~ 143 (186)
.......... +........... +.........+..+++ |+|+++|++|.+++.. ..+.+.+. ..+.
T Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~-P~Lii~G~~D~vv~~~~~~~l~~~~~--~~~~ 310 (349)
T PLN02385 235 AFRDLKKRKMAE-YNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSL-PLLILHGEADKVTDPSVSKFLYEKAS--SSDK 310 (349)
T ss_pred cccCHHHHHHhh-cCcceeCCCcchHHHHHHHHHHHHHHHhcccCCC-CEEEEEeCCCCccChHHHHHHHHHcC--CCCc
Confidence 0000000000 000000000000 0000000123445566 9999999999998642 23332221 2457
Q ss_pred EEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 144 ELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 144 ~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
+++++++++|.+...... +..+++++.|.+||+++
T Consensus 311 ~l~~i~~~gH~l~~e~p~--------~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 311 KLKLYEDAYHSILEGEPD--------EMIFQVLDDIISWLDSH 345 (349)
T ss_pred eEEEeCCCeeecccCCCh--------hhHHHHHHHHHHHHHHh
Confidence 999999999998763210 22456999999999864
No 23
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.60 E-value=1.9e-14 Score=107.86 Aligned_cols=148 Identities=21% Similarity=0.346 Sum_probs=85.1
Q ss_pred CCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCC---
Q 038786 13 FQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLN--- 89 (186)
Q Consensus 13 ~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 89 (186)
..+++|+||||||.+|+.++.++ |+.++++|+++|+.......... .. ......+...+.+..
T Consensus 133 ~~~i~l~GhSmGG~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~ 198 (330)
T PLN02298 133 GLPRFLYGESMGGAICLLIHLAN------PEGFDGAVLVAPMCKISDKIRPP-------WP-IPQILTFVARFLPTLAIV 198 (330)
T ss_pred CCCEEEEEecchhHHHHHHHhcC------cccceeEEEecccccCCcccCCc-------hH-HHHHHHHHHHHCCCCccc
Confidence 34799999999999999999876 67899999999976533211000 00 000000000000000
Q ss_pred --CCC---------------CCC--Cc-CCCC-----------CCCCCCCCCCCCCEEEEeeCcccccccH--HHHHHHH
Q 038786 90 --SDK---------------GHP--YT-CPMG-----------PAGPPIDGLKLPPFLLCVAGNDLIKDTE--MEYYEAM 136 (186)
Q Consensus 90 --~~~---------------~~~--~~-~p~~-----------~~~~~~~~~~~pP~li~~g~~D~~~~~~--~~~~~~l 136 (186)
... .++ +. .+.. .....+..+++ |+||++|++|.+++.. ..+++.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvLii~G~~D~ivp~~~~~~l~~~i 277 (330)
T PLN02298 199 PTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSI-PFIVLHGSADVVTDPDVSRALYEEA 277 (330)
T ss_pred cCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCC-CEEEEecCCCCCCCHHHHHHHHHHh
Confidence 000 000 00 0000 00123445556 9999999999998642 3333333
Q ss_pred HHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 137 KKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 137 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
. ....+++++++++|........ ...+++.+.+.+||++
T Consensus 278 ~--~~~~~l~~~~~a~H~~~~e~pd--------~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 278 K--SEDKTIKIYDGMMHSLLFGEPD--------ENIEIVRRDILSWLNE 316 (330)
T ss_pred c--cCCceEEEcCCcEeeeecCCCH--------HHHHHHHHHHHHHHHH
Confidence 2 2457999999999998763210 2357788999999975
No 24
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.60 E-value=1e-15 Score=108.33 Aligned_cols=129 Identities=29% Similarity=0.389 Sum_probs=90.0
Q ss_pred ccccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHH
Q 038786 3 ENNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDK 80 (186)
Q Consensus 3 ~l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (186)
+++||+++. +.++|.++|+|+||.+|+.++... +.+++++.++|...... .
T Consensus 85 a~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-------~~~~a~v~~yg~~~~~~---~----------------- 137 (218)
T PF01738_consen 85 AVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-------PRVDAAVSFYGGSPPPP---P----------------- 137 (218)
T ss_dssp HHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-------TTSSEEEEES-SSSGGG---H-----------------
T ss_pred HHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-------cccceEEEEcCCCCCCc---c-----------------
Confidence 467777776 778999999999999999888633 37999999999110000 0
Q ss_pred HHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccH--HHHHHHHHHCCCceEEEEeCCCCcccccc
Q 038786 81 FLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTE--MEYYEAMKKAGKDVELLVSPGMGHSFYLD 158 (186)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 158 (186)
.. ....++. |+++++|++|+..+.. ..+.+.+++.+.++++++|||++|+|...
T Consensus 138 -~~----------------------~~~~~~~-P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~ 193 (218)
T PF01738_consen 138 -LE----------------------DAPKIKA-PVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANP 193 (218)
T ss_dssp -HH----------------------HGGG--S--EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTST
T ss_pred -hh----------------------hhcccCC-CEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCC
Confidence 00 0111334 9999999999887743 57888888889999999999999999975
Q ss_pred ccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 159 KIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
... +......++..+.+.+||+++
T Consensus 194 ~~~----~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 194 SRP----PYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp TST----T--HHHHHHHHHHHHHHHCC-
T ss_pred CCc----ccCHHHHHHHHHHHHHHHHhc
Confidence 433 234478899999999999875
No 25
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.60 E-value=1.3e-15 Score=103.96 Aligned_cols=152 Identities=16% Similarity=0.140 Sum_probs=94.0
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccc------cC-CCCCCCcHHHHHHHHHh
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSEL------EN-PQSPLLTLDMVDKFLSF 84 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~ 84 (186)
+.+.|+++|-||||.+|+.+|.++ .+++++.+|+............ ++ ..-.-.+.+........
T Consensus 83 gy~eI~v~GlSmGGv~alkla~~~--------p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~ 154 (243)
T COG1647 83 GYDEIAVVGLSMGGVFALKLAYHY--------PPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKS 154 (243)
T ss_pred CCCeEEEEeecchhHHHHHHHhhC--------CccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHH
Confidence 578999999999999999999988 4899999998877544322211 11 01111223333333333
Q ss_pred cCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHH--HCCCceEEEEeCCCCcccccccccc
Q 038786 85 ALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMK--KAGKDVELLVSPGMGHSFYLDKIAV 162 (186)
Q Consensus 85 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~H~~~~~~~~~ 162 (186)
|.............-+......+..+.. |++++.|++|..+|... ++.+- -...+.+++.|++.+|.+..+
T Consensus 155 ~~~~~~~~~~~~~~~i~~~~~~~~~I~~-pt~vvq~~~D~mv~~~s--A~~Iy~~v~s~~KeL~~~e~SgHVIt~D---- 227 (243)
T COG1647 155 YKDTPMTTTAQLKKLIKDARRSLDKIYS-PTLVVQGRQDEMVPAES--ANFIYDHVESDDKELKWLEGSGHVITLD---- 227 (243)
T ss_pred hhcchHHHHHHHHHHHHHHHhhhhhccc-chhheecccCCCCCHHH--HHHHHHhccCCcceeEEEccCCceeecc----
Confidence 3210000000000000011223444556 99999999999987432 22222 234578999999999999886
Q ss_pred CCCcchhHHHHHHHHHHHHHhhh
Q 038786 163 DMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 163 ~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
.+.+++.+++..||+.
T Consensus 228 -------~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 228 -------KERDQVEEDVITFLEK 243 (243)
T ss_pred -------hhHHHHHHHHHHHhhC
Confidence 7899999999999974
No 26
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.60 E-value=1.9e-15 Score=106.25 Aligned_cols=174 Identities=24% Similarity=0.306 Sum_probs=86.6
Q ss_pred cccccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccC-CCCCCCcHHHH
Q 038786 2 RENNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELEN-PQSPLLTLDMV 78 (186)
Q Consensus 2 ~~l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~-~~~~~~~~~~~ 78 (186)
+|++||+++. +.++|.|+|.|.||-+|+.+|..+ | .|+++|.++|.............. ..-+++.....
T Consensus 8 ~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~------~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~ 80 (213)
T PF08840_consen 8 EAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRF------P-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDIS 80 (213)
T ss_dssp HHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHS------S-SEEEEEEES--SB--SSEEEETTE--EE----B-GG
T ss_pred HHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcC------C-CccEEEEeCCceeEecchhcccCCCccCCcCCcChh
Confidence 5789999987 667999999999999999999988 4 899999999865432211111110 00000000000
Q ss_pred H--HHHH-hcCC--CCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCccccccc---HHHHHHHHHHCCCc--eEEEEe
Q 038786 79 D--KFLS-FALP--LNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDT---EMEYYEAMKKAGKD--VELLVS 148 (186)
Q Consensus 79 ~--~~~~-~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~---~~~~~~~l~~~~~~--~~~~~~ 148 (186)
. .... .+.. ............... .+..++. |+|+++|++|.+-|. ...+.++|++.+.+ +++..|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~I---pvE~i~~-piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y 156 (213)
T PF08840_consen 81 KFSWNEPGLLRSRYAFELADDKAVEEARI---PVEKIKG-PILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSY 156 (213)
T ss_dssp G-EE-TTS-EE-TT-B--TTTGGGCCCB-----GGG--S-EEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEE
T ss_pred hceecCCcceehhhhhhcccccccccccc---cHHHcCC-CEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEc
Confidence 0 0000 0000 000000000000001 1333445 999999999988764 34556778777655 788899
Q ss_pred CCCCcccccc--cccc-------------CCCc-chhHHHHHHHHHHHHHhhhC
Q 038786 149 PGMGHSFYLD--KIAV-------------DMDP-NTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 149 ~~~~H~~~~~--~~~~-------------~~~~-~~~~~~~~~~~~i~~fl~~~ 186 (186)
|++||.+..- +... .-++ ......++....+++||++|
T Consensus 157 ~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~ 210 (213)
T PF08840_consen 157 PGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKH 210 (213)
T ss_dssp TTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998641 1100 0000 11225578889999999874
No 27
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.60 E-value=5.4e-15 Score=107.77 Aligned_cols=161 Identities=16% Similarity=0.158 Sum_probs=91.7
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCc-----ccccC-CCCCCC---
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSK-----SELEN-PQSPLL--- 73 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~-----~~~~~-~~~~~~--- 73 (186)
.+..+.++.+.++++|+||||||.+++.++.+. |+++++++++++......... ..... ......
T Consensus 84 ~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~------p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (278)
T TIGR03056 84 DLSALCAAEGLSPDGVIGHSAGAAIALRLALDG------PVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPM 157 (278)
T ss_pred HHHHHHHHcCCCCceEEEECccHHHHHHHHHhC------CcccceEEEEcCcccccccccccccchhhHhhhhcccchHH
Confidence 344455556778999999999999999999877 667899998887543211000 00000 000000
Q ss_pred ------cHHHHHHHHHhcCCCCCCC-C----CCCcC--------------CCCCCCCCCCCCCCCCEEEEeeCccccccc
Q 038786 74 ------TLDMVDKFLSFALPLNSDK-G----HPYTC--------------PMGPAGPPIDGLKLPPFLLCVAGNDLIKDT 128 (186)
Q Consensus 74 ------~~~~~~~~~~~~~~~~~~~-~----~~~~~--------------p~~~~~~~~~~~~~pP~li~~g~~D~~~~~ 128 (186)
.......+........... . ..... ........+..+++ |+++++|++|.+++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~lii~g~~D~~vp~ 236 (278)
T TIGR03056 158 MSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITI-PLHLIAGEEDKAVPP 236 (278)
T ss_pred HHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCC-CEEEEEeCCCcccCH
Confidence 0000000000000000000 0 00000 00000122444556 999999999998763
Q ss_pred HHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 129 EMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 129 ~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
...+.+.+....+++.++++++|.+.. +.++++.+.|.+|++
T Consensus 237 --~~~~~~~~~~~~~~~~~~~~~gH~~~~------------e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 237 --DESKRAATRVPTATLHVVPGGGHLVHE------------EQADGVVGLILQAAE 278 (278)
T ss_pred --HHHHHHHHhccCCeEEEECCCCCcccc------------cCHHHHHHHHHHHhC
Confidence 344555555556789999999999877 678999999999985
No 28
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.59 E-value=2.7e-14 Score=105.17 Aligned_cols=158 Identities=23% Similarity=0.211 Sum_probs=92.4
Q ss_pred CCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCC---CCcccc-----------cCCCC-----CCC
Q 038786 13 FQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQE---RSKSEL-----------ENPQS-----PLL 73 (186)
Q Consensus 13 ~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~---~~~~~~-----------~~~~~-----~~~ 73 (186)
..+++|+||||||.||+.++.+. +..++++|+.+|++.... ...... ..... ...
T Consensus 106 ~~p~~l~gHSmGg~Ia~~~~~~~------~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 179 (298)
T COG2267 106 GLPVFLLGHSMGGLIALLYLARY------PPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVL 179 (298)
T ss_pred CCCeEEEEeCcHHHHHHHHHHhC------CccccEEEEECccccCChhHHHHHHHHHhcccccccccccccCcccccCcC
Confidence 46899999999999999999988 568999999999987762 100000 00000 000
Q ss_pred c--HHHHHHHHHhcCCCCC-----CCCCCCcCCCC--C--CCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCC-
Q 038786 74 T--LDMVDKFLSFALPLNS-----DKGHPYTCPMG--P--AGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGK- 141 (186)
Q Consensus 74 ~--~~~~~~~~~~~~~~~~-----~~~~~~~~p~~--~--~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~- 141 (186)
+ ..........|..... ....+...... . .......+.+ |+|+++|++|.+++......+.++..+.
T Consensus 180 ~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~-PvLll~g~~D~vv~~~~~~~~~~~~~~~~ 258 (298)
T COG2267 180 TDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIAL-PVLLLQGGDDRVVDNVEGLARFFERAGSP 258 (298)
T ss_pred cchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccC-CEEEEecCCCccccCcHHHHHHHHhcCCC
Confidence 0 0001111111211110 00000000000 0 1111223445 9999999999998633455555555544
Q ss_pred ceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 142 DVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 142 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
++++++|+|+.|....+.. ...+++++.+.+|+.++
T Consensus 259 ~~~~~~~~g~~He~~~E~~---------~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 259 DKELKVIPGAYHELLNEPD---------RAREEVLKDILAWLAEA 294 (298)
T ss_pred CceEEecCCcchhhhcCcc---------hHHHHHHHHHHHHHHhh
Confidence 4799999999999998631 12299999999999763
No 29
>PRK10566 esterase; Provisional
Probab=99.57 E-value=1.6e-14 Score=104.05 Aligned_cols=147 Identities=16% Similarity=0.173 Sum_probs=83.3
Q ss_pred cccccccc--CCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccC-CCCCCCcHHHHH
Q 038786 3 ENNWLTEH--VDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELEN-PQSPLLTLDMVD 79 (186)
Q Consensus 3 ~l~~l~~~--~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (186)
+++|+.+. .+.++|+++|||+||.+|+.++.+. | .+++.+.+.+.............. ............
T Consensus 94 ~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (249)
T PRK10566 94 LRAAIREEGWLLDDRLAVGGASMGGMTALGIMARH------P-WVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEFN 166 (249)
T ss_pred HHHHHHhcCCcCccceeEEeecccHHHHHHHHHhC------C-CeeEEEEeeCcHHHHHHHHHhcccccccccccHHHHH
Confidence 34565554 3778999999999999999998866 3 355544433221110000000000 000000011111
Q ss_pred HHHHhcCCCCCCCCCCCcCCCCCCCCCCCCC-CCCCEEEEeeCcccccc--cHHHHHHHHHHCCC--ceEEEEeCCCCcc
Q 038786 80 KFLSFALPLNSDKGHPYTCPMGPAGPPIDGL-KLPPFLLCVAGNDLIKD--TEMEYYEAMKKAGK--DVELLVSPGMGHS 154 (186)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~--~~~~~~~~~~~H~ 154 (186)
.+..... . ..+ ...+..+ .. |+|++||++|.+++ .+..+.+.+...+. +++++.|++++|.
T Consensus 167 ~~~~~~~-----~----~~~----~~~~~~i~~~-P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~ 232 (249)
T PRK10566 167 NIVAPLA-----E----WEV----THQLEQLADR-PLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHR 232 (249)
T ss_pred HHHHHHh-----h----cCh----hhhhhhcCCC-CEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCc
Confidence 1111100 0 001 0112222 24 99999999998887 45777888887765 4789999999998
Q ss_pred ccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 155 FYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
+. .+.++.+.+||+++
T Consensus 233 ~~----------------~~~~~~~~~fl~~~ 248 (249)
T PRK10566 233 IT----------------PEALDAGVAFFRQH 248 (249)
T ss_pred cC----------------HHHHHHHHHHHHhh
Confidence 63 23578999999864
No 30
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.57 E-value=6.1e-15 Score=108.42 Aligned_cols=162 Identities=17% Similarity=0.156 Sum_probs=92.6
Q ss_pred cccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcc--cccCCCCCCCcHHHH-
Q 038786 2 RENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKS--ELENPQSPLLTLDMV- 78 (186)
Q Consensus 2 ~~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~--~~~~~~~~~~~~~~~- 78 (186)
+++.++.++.+.++++++||||||.+++.++..+ |++++++|++++.......... ...............
T Consensus 89 ~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (286)
T PRK03204 89 RVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVER------ADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILR 162 (286)
T ss_pred HHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhC------hhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhh
Confidence 3455666777888999999999999999999877 7799999998775421110000 000000000000000
Q ss_pred -HHHHHhcCCC----CCCC------CCCC---------------c---CCCC-CCCCCCCC--CCCCCEEEEeeCccccc
Q 038786 79 -DKFLSFALPL----NSDK------GHPY---------------T---CPMG-PAGPPIDG--LKLPPFLLCVAGNDLIK 126 (186)
Q Consensus 79 -~~~~~~~~~~----~~~~------~~~~---------------~---~p~~-~~~~~~~~--~~~pP~li~~g~~D~~~ 126 (186)
..+...++.. .... .... . .+.. .....+.. .++ |+++++|++|.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-PtliI~G~~D~~~ 241 (286)
T PRK03204 163 RNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTK-PTLLVWGMKDVAF 241 (286)
T ss_pred hhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCC-CeEEEecCCCccc
Confidence 0000100000 0000 0000 0 0000 00000111 135 9999999999876
Q ss_pred ccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHh
Q 038786 127 DTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFM 183 (186)
Q Consensus 127 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 183 (186)
+. ....+.+.+.....+++++++++|.... ++++++.+.|.+||
T Consensus 242 ~~-~~~~~~~~~~ip~~~~~~i~~aGH~~~~------------e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 242 RP-KTILPRLRATFPDHVLVELPNAKHFIQE------------DAPDRIAAAIIERF 285 (286)
T ss_pred Cc-HHHHHHHHHhcCCCeEEEcCCCcccccc------------cCHHHHHHHHHHhc
Confidence 43 2344566666667899999999999988 78999999999997
No 31
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.57 E-value=8.5e-15 Score=104.36 Aligned_cols=158 Identities=18% Similarity=0.216 Sum_probs=90.7
Q ss_pred ccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCC----CCcHHHHHH
Q 038786 5 NWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSP----LLTLDMVDK 80 (186)
Q Consensus 5 ~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 80 (186)
..+.+..+.++++++|||+||.+|+.++.++ |..+++++++++.................. .........
T Consensus 61 ~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~------~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (251)
T TIGR03695 61 ATLLDQLGIEPFFLVGYSMGGRIALYYALQY------PERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEA 134 (251)
T ss_pred HHHHHHcCCCeEEEEEeccHHHHHHHHHHhC------chheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccH
Confidence 3444555778999999999999999999987 668999999988654321110000000000 000000000
Q ss_pred HHHhcCC----CC---CCC------------CCC--C--------cCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHH
Q 038786 81 FLSFALP----LN---SDK------------GHP--Y--------TCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEME 131 (186)
Q Consensus 81 ~~~~~~~----~~---~~~------------~~~--~--------~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~ 131 (186)
+...+.. .. ... ... . ..........+..+++ |+++++|++|...+ .
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~---~ 210 (251)
T TIGR03695 135 FLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTI-PVLYLCGEKDEKFV---Q 210 (251)
T ss_pred HHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCC-ceEEEeeCcchHHH---H
Confidence 0000000 00 000 000 0 0000000112334555 99999999997653 3
Q ss_pred HHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 132 YYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 132 ~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
..+.+.+...+.+++++|+++|.... ++++++.+.|.+|++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~gH~~~~------------e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 211 IAKEMQKLLPNLTLVIIANAGHNIHL------------ENPEAFAKILLAFLE 251 (251)
T ss_pred HHHHHHhcCCCCcEEEEcCCCCCcCc------------cChHHHHHHHHHHhC
Confidence 45566666677899999999998887 668899999999984
No 32
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.55 E-value=3.4e-14 Score=102.12 Aligned_cols=157 Identities=13% Similarity=0.195 Sum_probs=89.1
Q ss_pred cccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCccccc--------CCCCCCCcHHHHH
Q 038786 8 TEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELE--------NPQSPLLTLDMVD 79 (186)
Q Consensus 8 ~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 79 (186)
.++.+.++++++||||||.+|+.++.+. |+.++++|+++++............ .....+.......
T Consensus 74 i~~~~~~~~~l~G~S~Gg~~a~~~a~~~------~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (257)
T TIGR03611 74 LDALNIERFHFVGHALGGLIGLQLALRY------PERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALF 147 (257)
T ss_pred HHHhCCCcEEEEEechhHHHHHHHHHHC------hHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhh
Confidence 3445778999999999999999999977 5689999999886543211100000 0000000000000
Q ss_pred HHHHhcCCCCC--------CCCCCCcC-----------CCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCC
Q 038786 80 KFLSFALPLNS--------DKGHPYTC-----------PMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAG 140 (186)
Q Consensus 80 ~~~~~~~~~~~--------~~~~~~~~-----------p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~ 140 (186)
.+...++.... ........ ........+..+++ |+++++|++|.+++.. ..+.+.+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~D~~~~~~--~~~~~~~~~ 224 (257)
T TIGR03611 148 LYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQH-PVLLIANRDDMLVPYT--QSLRLAAAL 224 (257)
T ss_pred hccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCc-cEEEEecCcCcccCHH--HHHHHHHhc
Confidence 00000000000 00000000 00011123444556 9999999999987632 233444444
Q ss_pred CceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 141 KDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 141 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
...+++.+++++|.+.. ++++++.+.+.+||++
T Consensus 225 ~~~~~~~~~~~gH~~~~------------~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 225 PNAQLKLLPYGGHASNV------------TDPETFNRALLDFLKT 257 (257)
T ss_pred CCceEEEECCCCCCccc------------cCHHHHHHHHHHHhcC
Confidence 56788999999999877 6789999999999964
No 33
>PRK06489 hypothetical protein; Provisional
Probab=99.54 E-value=2.2e-14 Score=108.78 Aligned_cols=67 Identities=24% Similarity=0.240 Sum_probs=51.5
Q ss_pred CCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCC----CccccccccccCCCcchhHHHHHHHHHHHH
Q 038786 106 PIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGM----GHSFYLDKIAVDMDPNTAAQTCGLFQGIAE 181 (186)
Q Consensus 106 ~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 181 (186)
.+..+++ |+|+++|++|.+++......+.+.+...+.+++++|++ +|.. . ++++++.+.|.+
T Consensus 287 ~L~~I~~-PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~-~------------e~P~~~~~~i~~ 352 (360)
T PRK06489 287 DLEKIKA-PVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGT-T------------GSAKFWKAYLAE 352 (360)
T ss_pred HHHhCCC-CEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCccc-c------------cCHHHHHHHHHH
Confidence 3555667 99999999998876543333556666667899999995 9987 3 458999999999
Q ss_pred HhhhC
Q 038786 182 FMRKH 186 (186)
Q Consensus 182 fl~~~ 186 (186)
|++++
T Consensus 353 FL~~~ 357 (360)
T PRK06489 353 FLAQV 357 (360)
T ss_pred HHHhc
Confidence 99763
No 34
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.54 E-value=1e-13 Score=103.10 Aligned_cols=153 Identities=16% Similarity=0.179 Sum_probs=103.0
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCC----CcccccCCCCCCCcHHHHH
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQER----SKSELENPQSPLLTLDMVD 79 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~ 79 (186)
.++|.+..+.++|+|||+|+||++++.+.+....... ...++++|++|||...... ......+...+++......
T Consensus 185 Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~-~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~~~D~l~~~~~~ 263 (374)
T PF10340_consen 185 YDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNK-LPYPKSAILISPWVNLVPQDSQEGSSYHDNEKRDMLSYKGLS 263 (374)
T ss_pred HHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCC-CCCCceeEEECCCcCCcCCCCCCCccccccccccccchhhHH
Confidence 4566655567899999999999999999887654322 2367999999999987631 1222234445566666666
Q ss_pred HHHHhcCCCCCCC----CCCCcCCCC-CCCCCCCCC-CCCCEEEEeeCcccccccHHHHHHHHHHCCC-----ceEEEEe
Q 038786 80 KFLSFALPLNSDK----GHPYTCPMG-PAGPPIDGL-KLPPFLLCVAGNDLIKDTEMEYYEAMKKAGK-----DVELLVS 148 (186)
Q Consensus 80 ~~~~~~~~~~~~~----~~~~~~p~~-~~~~~~~~~-~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~-----~~~~~~~ 148 (186)
.+.+.|.+..... ..+..++-. -..+.+..+ +..-++|+.|+++.+.|+..++++++.+.+. ..++.+.
T Consensus 264 ~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~EvfrddI~~~~~~~~~~~~~~~~~~~nv~~~ 343 (374)
T PF10340_consen 264 MFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVFRDDILEWAKKLNDVKPNKFSNSNNVYID 343 (374)
T ss_pred HHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCccccHHHHHHHHHHHhhcCccccCCcceEEEe
Confidence 6777776652222 222222211 012233332 1127999999999999999999999997654 3688888
Q ss_pred CCCCccccc
Q 038786 149 PGMGHSFYL 157 (186)
Q Consensus 149 ~~~~H~~~~ 157 (186)
+++.|.-+.
T Consensus 344 ~~G~Hi~P~ 352 (374)
T PF10340_consen 344 EGGIHIGPI 352 (374)
T ss_pred cCCccccch
Confidence 999998865
No 35
>COG0400 Predicted esterase [General function prediction only]
Probab=99.53 E-value=6.8e-14 Score=97.05 Aligned_cols=106 Identities=24% Similarity=0.274 Sum_probs=83.9
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSD 91 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (186)
+.++++++|+|-||++++.++.++ |..++++++++|++.....
T Consensus 97 ~~~~ii~~GfSqGA~ial~~~l~~------~~~~~~ail~~g~~~~~~~------------------------------- 139 (207)
T COG0400 97 DSSRIILIGFSQGANIALSLGLTL------PGLFAGAILFSGMLPLEPE------------------------------- 139 (207)
T ss_pred ChhheEEEecChHHHHHHHHHHhC------chhhccchhcCCcCCCCCc-------------------------------
Confidence 679999999999999999999988 6689999999998643210
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCEEEEeeCccccccc--HHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchh
Q 038786 92 KGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDT--EMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTA 169 (186)
Q Consensus 92 ~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 169 (186)
. ...+. .+|+|++||+.|++++. ..+..+.|.+.|.+++.+.++ ++|....
T Consensus 140 -----~------~~~~~---~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~------------ 192 (207)
T COG0400 140 -----L------LPDLA---GTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPP------------ 192 (207)
T ss_pred -----c------ccccC---CCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCH------------
Confidence 0 01121 23999999999999874 578889999999999999999 7898844
Q ss_pred HHHHHHHHHHHHHhhh
Q 038786 170 AQTCGLFQGIAEFMRK 185 (186)
Q Consensus 170 ~~~~~~~~~i~~fl~~ 185 (186)
+.++.+.+|+.+
T Consensus 193 ----e~~~~~~~wl~~ 204 (207)
T COG0400 193 ----EELEAARSWLAN 204 (207)
T ss_pred ----HHHHHHHHHHHh
Confidence 445566667754
No 36
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.53 E-value=8.4e-15 Score=106.79 Aligned_cols=62 Identities=24% Similarity=0.346 Sum_probs=47.5
Q ss_pred CCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 107 IDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 107 ~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
+..+++ |+++++|++|.+.+ ...+.+.+....++++++++++|.... ++++++.+.|.+|++
T Consensus 227 l~~i~~-P~lii~G~~D~~~~---~~~~~~~~~~~~~~~~~~~~~gH~~~~------------e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 227 LSEIKV-PTLLTVGEFDTMTP---EAAREMQELIAGSRLVVFPDGSHMTMI------------EDPEVYFKLLSDFIR 288 (288)
T ss_pred hhccCC-CEEEEecCCCccCH---HHHHHHHHhccCCeEEEeCCCCCCccc------------CCHHHHHHHHHHHhC
Confidence 344556 99999999998632 234445554456789999999999887 678999999999984
No 37
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.52 E-value=5.4e-14 Score=107.36 Aligned_cols=67 Identities=15% Similarity=0.336 Sum_probs=49.2
Q ss_pred CCCCCCCCCEEEEeeCcccccccHHHHHHHH-HH-CCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHh
Q 038786 106 PIDGLKLPPFLLCVAGNDLIKDTEMEYYEAM-KK-AGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFM 183 (186)
Q Consensus 106 ~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l-~~-~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 183 (186)
.+..+++ |+|+++|++|.+++.. ..+.+ ++ .+...++++|++++|..... +.++++++.+.+||
T Consensus 319 ~L~~I~v-PvLIi~G~~D~vvp~~--~a~~l~~~~~~~~k~l~~~~ga~H~l~~e-----------~~~e~v~~~I~~FL 384 (395)
T PLN02652 319 NFKSVTV-PFMVLHGTADRVTDPL--ASQDLYNEAASRHKDIKLYDGFLHDLLFE-----------PEREEVGRDIIDWM 384 (395)
T ss_pred hcccCCC-CEEEEEeCCCCCCCHH--HHHHHHHhcCCCCceEEEECCCeEEeccC-----------CCHHHHHHHHHHHH
Confidence 3455667 9999999999998632 22222 22 23457889999999998763 46899999999999
Q ss_pred hhC
Q 038786 184 RKH 186 (186)
Q Consensus 184 ~~~ 186 (186)
+.+
T Consensus 385 ~~~ 387 (395)
T PLN02652 385 EKR 387 (395)
T ss_pred HHH
Confidence 753
No 38
>PRK11071 esterase YqiA; Provisional
Probab=99.52 E-value=8.3e-14 Score=96.34 Aligned_cols=134 Identities=17% Similarity=0.095 Sum_probs=79.7
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCC------CCCCcHH
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQ------SPLLTLD 76 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~------~~~~~~~ 76 (186)
.+..+.++.+.++++++||||||.+|+.++.++ | . .+++++|..+............. ...++..
T Consensus 50 ~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~------~--~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (190)
T PRK11071 50 LLESLVLEHGGDPLGLVGSSLGGYYATWLSQCF------M--L-PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESR 120 (190)
T ss_pred HHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHc------C--C-CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHH
Confidence 345555666788999999999999999999987 3 2 35788887652111100000000 0111111
Q ss_pred HHHHHHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCcccc
Q 038786 77 MVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFY 156 (186)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 156 (186)
....... + .+ ..+. ... |++++||++|.++|. +.+.++.+ .++..+++|++|.|.
T Consensus 121 ~~~d~~~-~------------~~-----~~i~-~~~-~v~iihg~~De~V~~--~~a~~~~~---~~~~~~~~ggdH~f~ 175 (190)
T PRK11071 121 HIYDLKV-M------------QI-----DPLE-SPD-LIWLLQQTGDEVLDY--RQAVAYYA---ACRQTVEEGGNHAFV 175 (190)
T ss_pred HHHHHHh-c------------CC-----ccCC-Chh-hEEEEEeCCCCcCCH--HHHHHHHH---hcceEEECCCCcchh
Confidence 1111111 0 00 1121 223 889999999999863 33333333 235667899999994
Q ss_pred ccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 157 LDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
. .++.++.+.+|++
T Consensus 176 ~--------------~~~~~~~i~~fl~ 189 (190)
T PRK11071 176 G--------------FERYFNQIVDFLG 189 (190)
T ss_pred h--------------HHHhHHHHHHHhc
Confidence 4 4889999999975
No 39
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.52 E-value=7.5e-14 Score=107.08 Aligned_cols=64 Identities=22% Similarity=0.294 Sum_probs=46.7
Q ss_pred CCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 107 IDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 107 ~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
+..+++ |+++++|++|.+.+. ...+..+..+..++++++++++|.... ++++++.+.+.+|++.
T Consensus 321 l~~I~v-P~liI~G~~D~i~~~--~~~~~~~~~~~~~~~~~i~~aGH~~~~------------E~P~~f~~~l~~~~~~ 384 (402)
T PLN02894 321 ASEWKV-PTTFIYGRHDWMNYE--GAVEARKRMKVPCEIIRVPQGGHFVFL------------DNPSGFHSAVLYACRK 384 (402)
T ss_pred cccCCC-CEEEEEeCCCCCCcH--HHHHHHHHcCCCCcEEEeCCCCCeeec------------cCHHHHHHHHHHHHHH
Confidence 455566 999999999987542 222223334446889999999999887 6788888888888764
No 40
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.52 E-value=3e-14 Score=101.71 Aligned_cols=158 Identities=16% Similarity=0.154 Sum_probs=88.2
Q ss_pred ccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccc---cCCCCC----------
Q 038786 5 NWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSEL---ENPQSP---------- 71 (186)
Q Consensus 5 ~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~---~~~~~~---------- 71 (186)
..+.+..+.++++++|||+||.+++.++.+. |+.+++++++++............ ......
T Consensus 70 ~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~------p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (251)
T TIGR02427 70 LALLDHLGIERAVFCGLSLGGLIAQGLAARR------PDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLE 143 (251)
T ss_pred HHHHHHhCCCceEEEEeCchHHHHHHHHHHC------HHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHH
Confidence 3344555778999999999999999999876 668999998887543211100000 000000
Q ss_pred ------CC--cHHHHHHHHHhcCCCCCCCCC---CCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCC
Q 038786 72 ------LL--TLDMVDKFLSFALPLNSDKGH---PYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAG 140 (186)
Q Consensus 72 ------~~--~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~ 140 (186)
+. .......+............. ..... ......+..+++ |+++++|++|.+++.. ..+.+.+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-Pvlii~g~~D~~~~~~--~~~~~~~~~ 219 (251)
T TIGR02427 144 RWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRD-ADFRDRLGAIAV-PTLCIAGDQDGSTPPE--LVREIADLV 219 (251)
T ss_pred HHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhc-ccHHHHhhhcCC-CeEEEEeccCCcCChH--HHHHHHHhC
Confidence 00 000000000000000000000 00000 000122334456 9999999999987642 334444444
Q ss_pred CceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 141 KDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 141 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
...+++++++++|.... +.++++.+.+.+|++
T Consensus 220 ~~~~~~~~~~~gH~~~~------------~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 220 PGARFAEIRGAGHIPCV------------EQPEAFNAALRDFLR 251 (251)
T ss_pred CCceEEEECCCCCcccc------------cChHHHHHHHHHHhC
Confidence 46789999999998877 668899999999974
No 41
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.52 E-value=1.6e-14 Score=108.85 Aligned_cols=64 Identities=16% Similarity=0.224 Sum_probs=49.4
Q ss_pred CCCCCCCCEEEEeeCcccccccHHHHHHHHHH-CCCceEEEEeCC-CCccccccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 107 IDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKK-AGKDVELLVSPG-MGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 107 ~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~-~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
+..+++ |+|+++|+.|.+++.. ..+.+.+ .....+++++++ ++|.... ++++++.+.+.+||+
T Consensus 273 l~~I~~-PtLvi~G~~D~~~p~~--~~~~~~~~i~p~a~l~~i~~~aGH~~~l------------E~Pe~~~~~l~~FL~ 337 (343)
T PRK08775 273 PEAIRV-PTVVVAVEGDRLVPLA--DLVELAEGLGPRGSLRVLRSPYGHDAFL------------KETDRIDAILTTALR 337 (343)
T ss_pred hhcCCC-CeEEEEeCCCEeeCHH--HHHHHHHHcCCCCeEEEEeCCccHHHHh------------cCHHHHHHHHHHHHH
Confidence 455667 9999999999987532 2333433 334689999985 9999988 789999999999997
Q ss_pred h
Q 038786 185 K 185 (186)
Q Consensus 185 ~ 185 (186)
+
T Consensus 338 ~ 338 (343)
T PRK08775 338 S 338 (343)
T ss_pred h
Confidence 5
No 42
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.51 E-value=1.3e-13 Score=106.02 Aligned_cols=154 Identities=18% Similarity=0.124 Sum_probs=90.7
Q ss_pred ccccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHH
Q 038786 3 ENNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDK 80 (186)
Q Consensus 3 ~l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (186)
+++|+.+.. |.++|+++|||+||++|+.++... |++++++|+++|+.+........... . ......
T Consensus 252 vld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~------p~ri~a~V~~~~~~~~~~~~~~~~~~----~--p~~~~~ 319 (414)
T PRK05077 252 VLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE------PPRLKAVACLGPVVHTLLTDPKRQQQ----V--PEMYLD 319 (414)
T ss_pred HHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC------CcCceEEEEECCccchhhcchhhhhh----c--hHHHHH
Confidence 456665553 789999999999999999999876 66899999999986421111100000 0 000011
Q ss_pred HHHhcCCCCCCCCC---CCcCCCC-CCCCCC-CCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccc
Q 038786 81 FLSFALPLNSDKGH---PYTCPMG-PAGPPI-DGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSF 155 (186)
Q Consensus 81 ~~~~~~~~~~~~~~---~~~~p~~-~~~~~~-~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 155 (186)
.+...++....... ..+.... .....+ ..+++ |+|+++|++|.++|. +.++.+.+...+.++.++|++ |.+
T Consensus 320 ~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~-PvLiI~G~~D~ivP~--~~a~~l~~~~~~~~l~~i~~~-~~~ 395 (414)
T PRK05077 320 VLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPT-PMLSGYWKNDPFSPE--EDSRLIASSSADGKLLEIPFK-PVY 395 (414)
T ss_pred HHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCC-cEEEEecCCCCCCCH--HHHHHHHHhCCCCeEEEccCC-Ccc
Confidence 11111111000000 0000000 000111 23445 999999999999764 444466666678899999997 333
Q ss_pred cccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 156 YLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
+..+++++.+.+||+++
T Consensus 396 --------------e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 396 --------------RNFDKALQEISDWLEDR 412 (414)
T ss_pred --------------CCHHHHHHHHHHHHHHH
Confidence 45899999999999863
No 43
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.51 E-value=2.6e-13 Score=102.49 Aligned_cols=50 Identities=14% Similarity=0.200 Sum_probs=42.7
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCC
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQ 58 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~ 58 (186)
++++++++.+.++++++||||||.+++.++..+ |++++++++++|..+..
T Consensus 125 ~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~------~~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 125 CVDYICRTSKLDQISLLGICQGGTFSLCYAALY------PDKIKNLVTMVTPVDFE 174 (350)
T ss_pred HHHHHHHHhCCCcccEEEECHHHHHHHHHHHhC------chheeeEEEeccccccC
Confidence 466777777888999999999999999998876 66899999999987754
No 44
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.51 E-value=1.1e-13 Score=105.20 Aligned_cols=157 Identities=25% Similarity=0.323 Sum_probs=89.0
Q ss_pred ccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccC-CC--------------
Q 038786 5 NWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELEN-PQ-------------- 69 (186)
Q Consensus 5 ~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~-~~-------------- 69 (186)
..+.++.+.++++|+|||+||.+|+.++.++ |.+++++++++|.............. ..
T Consensus 188 ~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~------~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (371)
T PRK14875 188 LAFLDALGIERAHLVGHSMGGAVALRLAARA------PQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELL 261 (371)
T ss_pred HHHHHhcCCccEEEEeechHHHHHHHHHHhC------chheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHH
Confidence 3344556778999999999999999999876 66899999998864322111110000 00
Q ss_pred ---CCCCcHHHHHHHHHhcCCCCCCC---------CCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHH
Q 038786 70 ---SPLLTLDMVDKFLSFALPLNSDK---------GHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMK 137 (186)
Q Consensus 70 ---~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~ 137 (186)
............+... ...... ..............+..+++ |+|+++|++|.+++.. ..+.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlii~g~~D~~vp~~--~~~~l- 336 (371)
T PRK14875 262 FADPALVTRQMVEDLLKYK-RLDGVDDALRALADALFAGGRQRVDLRDRLASLAI-PVLVIWGEQDRIIPAA--HAQGL- 336 (371)
T ss_pred hcChhhCCHHHHHHHHHHh-ccccHHHHHHHHHHHhccCcccchhHHHHHhcCCC-CEEEEEECCCCccCHH--HHhhc-
Confidence 0000000000000000 000000 00000000000112334456 9999999999987632 22222
Q ss_pred HCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 138 KAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 138 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
...++++++++++|.... ++++++.+.|.+|++++
T Consensus 337 --~~~~~~~~~~~~gH~~~~------------e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 337 --PDGVAVHVLPGAGHMPQM------------EAAADVNRLLAEFLGKA 371 (371)
T ss_pred --cCCCeEEEeCCCCCChhh------------hCHHHHHHHHHHHhccC
Confidence 235789999999998877 67899999999999864
No 45
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.51 E-value=5.8e-14 Score=99.97 Aligned_cols=62 Identities=16% Similarity=0.233 Sum_probs=49.1
Q ss_pred CCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHh
Q 038786 107 IDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFM 183 (186)
Q Consensus 107 ~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 183 (186)
+..+++ |+++++|++|.+++. ...+.+.+....++++++++++|.... ++++++.+.+.+|+
T Consensus 184 l~~i~~-Pvlii~g~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~gH~~~~------------e~p~~~~~~i~~fi 245 (245)
T TIGR01738 184 LQNISV-PFLRLYGYLDGLVPA--KVVPYLDKLAPHSELYIFAKAAHAPFL------------SHAEAFCALLVAFK 245 (245)
T ss_pred HhcCCC-CEEEEeecCCcccCH--HHHHHHHHhCCCCeEEEeCCCCCCccc------------cCHHHHHHHHHhhC
Confidence 445556 999999999998763 233445555557899999999999888 77999999999986
No 46
>PLN02578 hydrolase
Probab=99.50 E-value=2.4e-13 Score=102.88 Aligned_cols=62 Identities=19% Similarity=0.142 Sum_probs=49.2
Q ss_pred CCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 107 IDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 107 ~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
+..+++ |+++++|++|.+++. ...+++.+...+.+++++ +++|..+. ++++++.+.|.+|++
T Consensus 292 l~~i~~-PvLiI~G~~D~~v~~--~~~~~l~~~~p~a~l~~i-~~GH~~~~------------e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 292 LSKLSC-PLLLLWGDLDPWVGP--AKAEKIKAFYPDTTLVNL-QAGHCPHD------------EVPEQVNKALLEWLS 353 (354)
T ss_pred hhcCCC-CEEEEEeCCCCCCCH--HHHHHHHHhCCCCEEEEe-CCCCCccc------------cCHHHHHHHHHHHHh
Confidence 445566 999999999988653 345566665566788888 58999987 789999999999986
No 47
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.50 E-value=1.1e-13 Score=100.00 Aligned_cols=153 Identities=16% Similarity=0.177 Sum_probs=90.7
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCC--CcccccC----CCCCC--CcHHHHHHHHH
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQER--SKSELEN----PQSPL--LTLDMVDKFLS 83 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~--~~~~~~~----~~~~~--~~~~~~~~~~~ 83 (186)
..++++++||||||.+|+.+|.++ |+++++++++++....... ....... ..... ........+..
T Consensus 72 ~~~~~~lvGhS~Gg~ia~~~a~~~------p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (256)
T PRK10349 72 APDKAIWLGWSLGGLVASQIALTH------PERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLA 145 (256)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhC------hHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHH
Confidence 568999999999999999999877 7789999998774322110 0000000 00000 00011111111
Q ss_pred hc-CCCCC-------------CCCCCCc---C------CCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCC
Q 038786 84 FA-LPLNS-------------DKGHPYT---C------PMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAG 140 (186)
Q Consensus 84 ~~-~~~~~-------------~~~~~~~---~------p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~ 140 (186)
.. ..... ....+.. . -.......+..+++ |+|+++|++|.+++ .+..+.+.+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~~~--~~~~~~~~~~i 222 (256)
T PRK10349 146 LQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSM-PFLRLYGYLDGLVP--RKVVPMLDKLW 222 (256)
T ss_pred HHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCC-CeEEEecCCCccCC--HHHHHHHHHhC
Confidence 00 00000 0000000 0 00011223555566 99999999999865 34456667766
Q ss_pred CceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 141 KDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 141 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
...++.++|+++|.... ++++++.+.+.+|-++
T Consensus 223 ~~~~~~~i~~~gH~~~~------------e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 223 PHSESYIFAKAAHAPFI------------SHPAEFCHLLVALKQR 255 (256)
T ss_pred CCCeEEEeCCCCCCccc------------cCHHHHHHHHHHHhcc
Confidence 78899999999999988 7899999999998654
No 48
>PRK13604 luxD acyl transferase; Provisional
Probab=99.49 E-value=1.7e-13 Score=100.03 Aligned_cols=136 Identities=15% Similarity=0.247 Sum_probs=78.6
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccC-----CC----CC--
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELEN-----PQ----SP-- 71 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~-----~~----~~-- 71 (186)
+++|++++ +.++|+|+||||||.+|+..|... .++++|+.+|+.+..+........ .. ..
T Consensus 98 aid~lk~~-~~~~I~LiG~SmGgava~~~A~~~--------~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d 168 (307)
T PRK13604 98 VVDWLNTR-GINNLGLIAASLSARIAYEVINEI--------DLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLD 168 (307)
T ss_pred HHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC--------CCCEEEEcCCcccHHHHHHHhhhcccccCcccccccccc
Confidence 57898776 468999999999999986666522 499999999998743211110000 00 00
Q ss_pred CCcHHH-HHHHHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccH--HHHHHHHHHCCCceEEEEe
Q 038786 72 LLTLDM-VDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTE--MEYYEAMKKAGKDVELLVS 148 (186)
Q Consensus 72 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~--~~~~~~l~~~~~~~~~~~~ 148 (186)
+..... ...|....+ .... ....+|. +.+..++. |+|++||++|.+++.. ..+.+.+. ..+.+++++
T Consensus 169 ~~g~~l~~~~f~~~~~--~~~~-~~~~s~i----~~~~~l~~-PvLiIHG~~D~lVp~~~s~~l~e~~~--s~~kkl~~i 238 (307)
T PRK13604 169 FEGHNLGSEVFVTDCF--KHGW-DTLDSTI----NKMKGLDI-PFIAFTANNDSWVKQSEVIDLLDSIR--SEQCKLYSL 238 (307)
T ss_pred cccccccHHHHHHHHH--hcCc-cccccHH----HHHhhcCC-CEEEEEcCCCCccCHHHHHHHHHHhc--cCCcEEEEe
Confidence 000000 112222110 0000 0112232 12333445 9999999999998742 34443332 247899999
Q ss_pred CCCCccccc
Q 038786 149 PGMGHSFYL 157 (186)
Q Consensus 149 ~~~~H~~~~ 157 (186)
||+.|.+..
T Consensus 239 ~Ga~H~l~~ 247 (307)
T PRK13604 239 IGSSHDLGE 247 (307)
T ss_pred CCCccccCc
Confidence 999999975
No 49
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.49 E-value=9.3e-14 Score=99.52 Aligned_cols=152 Identities=15% Similarity=0.159 Sum_probs=85.5
Q ss_pred ccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccc-c-C-------CCCCCCcHHH
Q 038786 7 LTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSEL-E-N-------PQSPLLTLDM 77 (186)
Q Consensus 7 l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~-~-~-------~~~~~~~~~~ 77 (186)
+.++.+.++++++||||||.+|+.++.+++ +.++++++++++............ . . ...... ...
T Consensus 59 ~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~-----~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 132 (242)
T PRK11126 59 TLQSYNILPYWLVGYSLGGRIAMYYACQGL-----AGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPL-EQV 132 (242)
T ss_pred HHHHcCCCCeEEEEECHHHHHHHHHHHhCC-----cccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcH-HHH
Confidence 345557889999999999999999999872 224999998876543221100000 0 0 000000 001
Q ss_pred HHHHHH-hcCCCCCC---------CC---C----CC-----cCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHH
Q 038786 78 VDKFLS-FALPLNSD---------KG---H----PY-----TCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEA 135 (186)
Q Consensus 78 ~~~~~~-~~~~~~~~---------~~---~----~~-----~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~ 135 (186)
...++. ........ .. . .. ........+.+..+++ |+++++|++|.++. .+++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~~~---~~~~~ 208 (242)
T PRK11126 133 LADWYQQPVFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTF-PFYYLCGERDSKFQ---ALAQQ 208 (242)
T ss_pred HHHHHhcchhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCC-CeEEEEeCCcchHH---HHHHH
Confidence 100000 00000000 00 0 00 0000000123445667 99999999997642 22222
Q ss_pred HHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 136 MKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 136 l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
.+.+++++++++|.+.. +.++++.+.|.+|+++
T Consensus 209 -----~~~~~~~i~~~gH~~~~------------e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 209 -----LALPLHVIPNAGHNAHR------------ENPAAFAASLAQILRL 241 (242)
T ss_pred -----hcCeEEEeCCCCCchhh------------hChHHHHHHHHHHHhh
Confidence 15799999999999988 7799999999999975
No 50
>PRK07581 hypothetical protein; Validated
Probab=99.47 E-value=1.3e-13 Score=103.73 Aligned_cols=64 Identities=17% Similarity=0.079 Sum_probs=49.9
Q ss_pred CCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCC-CCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 107 IDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPG-MGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 107 ~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
+..+++ |+|+++|++|.+++. ...+.+.+.....+++++++ ++|.... ++.+++...|.+|+++
T Consensus 271 L~~I~~-PtLvI~G~~D~~~p~--~~~~~l~~~ip~a~l~~i~~~~GH~~~~------------~~~~~~~~~~~~~~~~ 335 (339)
T PRK07581 271 LGSITA-KTFVMPISTDLYFPP--EDCEAEAALIPNAELRPIESIWGHLAGF------------GQNPADIAFIDAALKE 335 (339)
T ss_pred HhcCCC-CEEEEEeCCCCCCCH--HHHHHHHHhCCCCeEEEeCCCCCccccc------------cCcHHHHHHHHHHHHH
Confidence 445666 999999999988763 23445555556689999999 8999887 6688888899999875
No 51
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.47 E-value=2.1e-13 Score=104.00 Aligned_cols=67 Identities=21% Similarity=0.274 Sum_probs=53.3
Q ss_pred CCCCCCCCEEEEeeCccccccc--HHHHHHHHHHCCCceEEEEeC-CCCccccccccccCCCcchhHHHHHHHHHHHHHh
Q 038786 107 IDGLKLPPFLLCVAGNDLIKDT--EMEYYEAMKKAGKDVELLVSP-GMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFM 183 (186)
Q Consensus 107 ~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 183 (186)
+..+++ |+|+++|+.|.+++. .+.+++.+...++.+++.+++ +++|.... ++++++.+.+.+||
T Consensus 305 l~~I~~-PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l------------e~p~~~~~~L~~FL 371 (379)
T PRK00175 305 LARIKA-RFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFL------------LDDPRYGRLVRAFL 371 (379)
T ss_pred HhcCCC-CEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh------------cCHHHHHHHHHHHH
Confidence 455667 999999999988653 456677776666667888775 99999988 67889999999999
Q ss_pred hhC
Q 038786 184 RKH 186 (186)
Q Consensus 184 ~~~ 186 (186)
+++
T Consensus 372 ~~~ 374 (379)
T PRK00175 372 ERA 374 (379)
T ss_pred Hhh
Confidence 763
No 52
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.46 E-value=1e-13 Score=107.55 Aligned_cols=62 Identities=18% Similarity=0.155 Sum_probs=49.3
Q ss_pred CCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 110 LKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 110 ~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
+++ |+|+++|++|.++|. +..+.+.+..++++++++++++|..... ++++++.+.+.+|.+.
T Consensus 417 I~v-PtLII~Ge~D~ivP~--~~~~~la~~iP~a~l~vI~~aGH~~~v~-----------e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 417 LKC-DVAIFHGGDDELIPV--ECSYAVKAKVPRARVKVIDDKDHITIVV-----------GRQKEFARELEEIWRR 478 (481)
T ss_pred CCC-CEEEEEECCCCCCCH--HHHHHHHHhCCCCEEEEeCCCCCcchhh-----------cCHHHHHHHHHHHhhc
Confidence 456 999999999998753 4455566666779999999999997743 5689999999999864
No 53
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.45 E-value=1.2e-13 Score=104.41 Aligned_cols=66 Identities=26% Similarity=0.405 Sum_probs=48.3
Q ss_pred CCCCCCCCCEEEEeeCccccccc--HHHHHHHHHHCCCceEEE-EeCCCCccccccccccCCCcchhHHHHHHHHHHHHH
Q 038786 106 PIDGLKLPPFLLCVAGNDLIKDT--EMEYYEAMKKAGKDVELL-VSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEF 182 (186)
Q Consensus 106 ~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~-~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~f 182 (186)
.+..+++ |+|+++|++|.+++. ...+++.+......++++ ++++++|.... ++++++.+.|.+|
T Consensus 283 ~l~~I~~-P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~l------------e~p~~~~~~l~~F 349 (351)
T TIGR01392 283 ALSRIKA-PFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFL------------VETDQVEELIRGF 349 (351)
T ss_pred HHhhCCC-CEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhh------------cCHHHHHHHHHHH
Confidence 3455667 999999999988763 355566665544333443 45789999988 7799999999999
Q ss_pred hh
Q 038786 183 MR 184 (186)
Q Consensus 183 l~ 184 (186)
|+
T Consensus 350 L~ 351 (351)
T TIGR01392 350 LR 351 (351)
T ss_pred hC
Confidence 85
No 54
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.44 E-value=8.7e-13 Score=96.21 Aligned_cols=41 Identities=27% Similarity=0.438 Sum_probs=37.8
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQ 58 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~ 58 (186)
+.++.+|+|||+||+||..+|+++ |++|+.+||++|+.-..
T Consensus 158 ~L~KmilvGHSfGGYLaa~YAlKy------PerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 158 GLEKMILVGHSFGGYLAAKYALKY------PERVEKLILVSPWGFPE 198 (365)
T ss_pred CCcceeEeeccchHHHHHHHHHhC------hHhhceEEEeccccccc
Confidence 788999999999999999999999 88999999999986543
No 55
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.44 E-value=6.2e-13 Score=99.70 Aligned_cols=60 Identities=18% Similarity=0.216 Sum_probs=44.8
Q ss_pred CEEEEeeCcccccccHHHHHHHHHHC-CCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 114 PFLLCVAGNDLIKDTEMEYYEAMKKA-GKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 114 P~li~~g~~D~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
|+|+++|++|.+++... ..+..+.. ..+.++++|++++|..... .+.+++++.+.+||++
T Consensus 272 P~Lii~G~~D~vv~~~~-~~~~~~~~~~~~~~l~~~~g~~H~i~~E-----------~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 272 PILFIHSKGDCVCSYEG-TVSFYNKLSISNKELHTLEDMDHVITIE-----------PGNEEVLKKIIEWISN 332 (332)
T ss_pred CEEEEEeCCCCccCHHH-HHHHHHhccCCCcEEEEECCCCCCCccC-----------CCHHHHHHHHHHHhhC
Confidence 99999999999876421 12222332 2467899999999999874 3478899999999963
No 56
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.44 E-value=3e-13 Score=94.87 Aligned_cols=130 Identities=22% Similarity=0.286 Sum_probs=89.5
Q ss_pred ccccccccC-CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHH
Q 038786 3 ENNWLTEHV-DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKF 81 (186)
Q Consensus 3 ~l~~l~~~~-~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (186)
+.+||++.. +.++|+|+|+|+|...++.+|.+. | ++++|+.+|.++...-.-..
T Consensus 118 vye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~------~--~~alVL~SPf~S~~rv~~~~----------------- 172 (258)
T KOG1552|consen 118 VYEWLRNRYGSPERIILYGQSIGTVPTVDLASRY------P--LAAVVLHSPFTSGMRVAFPD----------------- 172 (258)
T ss_pred HHHHHHhhcCCCceEEEEEecCCchhhhhHhhcC------C--cceEEEeccchhhhhhhccC-----------------
Confidence 567888888 689999999999999999999977 3 99999999997643211110
Q ss_pred HHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCccccccc--HHHHHHHHHHCCCceEEEEeCCCCccccccc
Q 038786 82 LSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDT--EMEYYEAMKKAGKDVELLVSPGMGHSFYLDK 159 (186)
Q Consensus 82 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 159 (186)
.... +....+...+.++.+++ |+|++||++|.+++. +.++.++.+. .++-.+..|++|....
T Consensus 173 --------~~~~--~~~d~f~~i~kI~~i~~-PVLiiHgtdDevv~~sHg~~Lye~~k~---~~epl~v~g~gH~~~~-- 236 (258)
T KOG1552|consen 173 --------TKTT--YCFDAFPNIEKISKITC-PVLIIHGTDDEVVDFSHGKALYERCKE---KVEPLWVKGAGHNDIE-- 236 (258)
T ss_pred --------cceE--EeeccccccCcceeccC-CEEEEecccCceecccccHHHHHhccc---cCCCcEEecCCCcccc--
Confidence 0000 11111111345666778 999999999999874 4555555443 4677888888998764
Q ss_pred cccCCCcchhHHHHHHHHHHHHHhh
Q 038786 160 IAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
...++++.+..|+.
T Consensus 237 -----------~~~~yi~~l~~f~~ 250 (258)
T KOG1552|consen 237 -----------LYPEYIEHLRRFIS 250 (258)
T ss_pred -----------cCHHHHHHHHHHHH
Confidence 24566777777654
No 57
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.43 E-value=1.4e-13 Score=104.81 Aligned_cols=66 Identities=18% Similarity=0.275 Sum_probs=52.3
Q ss_pred CCCCCCCCEEEEeeCccccccc--HHHHHHHHHHCCCceEEEEeCC-CCccccccccccCCCcchhHHHHHHHHHHHHHh
Q 038786 107 IDGLKLPPFLLCVAGNDLIKDT--EMEYYEAMKKAGKDVELLVSPG-MGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFM 183 (186)
Q Consensus 107 ~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 183 (186)
+..++. |+|+++|+.|.+++. ...+++.+...+.+++++++++ ++|.... ++++++.+.|.+||
T Consensus 319 L~~I~~-PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l------------e~p~~~~~~I~~FL 385 (389)
T PRK06765 319 LSNIEA-NVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV------------FDIHLFEKKIYEFL 385 (389)
T ss_pred HhcCCC-CEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh------------cCHHHHHHHHHHHH
Confidence 344566 999999999988763 3556666665556799999985 8999887 67899999999999
Q ss_pred hh
Q 038786 184 RK 185 (186)
Q Consensus 184 ~~ 185 (186)
++
T Consensus 386 ~~ 387 (389)
T PRK06765 386 NR 387 (389)
T ss_pred cc
Confidence 75
No 58
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.42 E-value=7.3e-13 Score=98.64 Aligned_cols=65 Identities=26% Similarity=0.311 Sum_probs=53.3
Q ss_pred CCCCC-CCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 107 IDGLK-LPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 107 ~~~~~-~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
++.+. + |+|+++|+.|.+++.. .+..+.+....++++++++++|..+. +.++++...|..|+.+
T Consensus 259 ~~~i~~~-pvlii~G~~D~~~p~~--~~~~~~~~~pn~~~~~I~~~gH~~h~------------e~Pe~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 259 IKKIWKC-PVLIIWGDKDQIVPLE--LAEELKKKLPNAELVEIPGAGHLPHL------------ERPEEVAALLRSFIAR 323 (326)
T ss_pred hccccCC-ceEEEEcCcCCccCHH--HHHHHHhhCCCceEEEeCCCCccccc------------CCHHHHHHHHHHHHHH
Confidence 34444 5 9999999999997643 56666665578999999999999988 7899999999999975
Q ss_pred C
Q 038786 186 H 186 (186)
Q Consensus 186 ~ 186 (186)
+
T Consensus 324 ~ 324 (326)
T KOG1454|consen 324 L 324 (326)
T ss_pred h
Confidence 3
No 59
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.42 E-value=4.9e-14 Score=99.03 Aligned_cols=140 Identities=24% Similarity=0.337 Sum_probs=81.7
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCC-----cccccCC-C------CC
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERS-----KSELENP-Q------SP 71 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~-----~~~~~~~-~------~~ 71 (186)
+..+.++.+.++++++|||+||.+++.++.++ |++++++++++|........ ....... . ..
T Consensus 56 l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (228)
T PF12697_consen 56 LAELLDALGIKKVILVGHSMGGMIALRLAARY------PDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRR 129 (228)
T ss_dssp HHHHHHHTTTSSEEEEEETHHHHHHHHHHHHS------GGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccccccccccccccccccccccccccc------ccccccceeecccccccccccccccchhhhhhhhcccccccc
Confidence 33445566778999999999999999999988 67999999999987532211 0000000 0 00
Q ss_pred C--------CcHHHHHHHHHh----cCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHC
Q 038786 72 L--------LTLDMVDKFLSF----ALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKA 139 (186)
Q Consensus 72 ~--------~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~ 139 (186)
+ ............ +.... ... ...... ...+..+++ |+++++|++|.+++ ....+.+.+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~---~~~~~~~~~-pvl~i~g~~D~~~~--~~~~~~~~~~ 201 (228)
T PF12697_consen 130 LASRFFYRWFDGDEPEDLIRSSRRALAEYL-RSN-LWQADL---SEALPRIKV-PVLVIHGEDDPIVP--PESAEELADK 201 (228)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHH-HHH-HHHHHH---HHHHHGSSS-EEEEEEETTSSSSH--HHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccc-ccc-cccccc---cccccccCC-CeEEeecCCCCCCC--HHHHHHHHHH
Confidence 0 000000000000 00000 000 000000 011233445 99999999999965 5666777765
Q ss_pred CCceEEEEeCCCCccccc
Q 038786 140 GKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 140 ~~~~~~~~~~~~~H~~~~ 157 (186)
..++++.++++++|....
T Consensus 202 ~~~~~~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 202 LPNAELVVIPGAGHFLFL 219 (228)
T ss_dssp STTEEEEEETTSSSTHHH
T ss_pred CCCCEEEEECCCCCccHH
Confidence 668999999999999887
No 60
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.42 E-value=4.7e-12 Score=90.30 Aligned_cols=130 Identities=27% Similarity=0.416 Sum_probs=97.2
Q ss_pred ccccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHH
Q 038786 3 ENNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDK 80 (186)
Q Consensus 3 ~l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (186)
+++||..+. +.++|.++|+|+||.+++.++.+. | .+++.+.++|.........
T Consensus 99 ~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~------~-~v~a~v~fyg~~~~~~~~~------------------ 153 (236)
T COG0412 99 ALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRA------P-EVKAAVAFYGGLIADDTAD------------------ 153 (236)
T ss_pred HHHHHHhCCCCCCceEEEEEEcccHHHHHHhhccc------C-CccEEEEecCCCCCCcccc------------------
Confidence 456776554 788999999999999999999865 3 7999999999754221000
Q ss_pred HHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCccccccc--HHHHHHHHHHCCCceEEEEeCCCCcccccc
Q 038786 81 FLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDT--EMEYYEAMKKAGKDVELLVSPGMGHSFYLD 158 (186)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 158 (186)
...++. |+|+..|+.|..++. ...+.+.+.+.+..+++++|+++.|+|...
T Consensus 154 --------------------------~~~~~~-pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~ 206 (236)
T COG0412 154 --------------------------APKIKV-PVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFAND 206 (236)
T ss_pred --------------------------cccccC-cEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccC
Confidence 111334 999999999988774 477888888888899999999999999864
Q ss_pred c-cccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 159 K-IAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 159 ~-~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
. .. .........+...+.+.+||+++
T Consensus 207 ~~~~--~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 207 RADY--HPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred CCcc--cccCCHHHHHHHHHHHHHHHHHh
Confidence 2 10 01123367889999999999863
No 61
>PRK10115 protease 2; Provisional
Probab=99.40 E-value=3.1e-12 Score=103.96 Aligned_cols=135 Identities=18% Similarity=0.148 Sum_probs=92.4
Q ss_pred cccccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHH
Q 038786 2 RENNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVD 79 (186)
Q Consensus 2 ~~l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (186)
.+++||.++. +++|++++|.|.||.++..++.+. |+.++++|...|+.|+....... ..+. ...
T Consensus 510 a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~------Pdlf~A~v~~vp~~D~~~~~~~~----~~p~-~~~--- 575 (686)
T PRK10115 510 DACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQR------PELFHGVIAQVPFVDVVTTMLDE----SIPL-TTG--- 575 (686)
T ss_pred HHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcC------hhheeEEEecCCchhHhhhcccC----CCCC-Chh---
Confidence 3567887776 999999999999999999999877 78999999999999865321100 0000 001
Q ss_pred HHHHhcCCCCCCC----CCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccc--cHHHHHHHHHHCCCceEEEEe---CC
Q 038786 80 KFLSFALPLNSDK----GHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKD--TEMEYYEAMKKAGKDVELLVS---PG 150 (186)
Q Consensus 80 ~~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~---~~ 150 (186)
++.. | +..... .....||+.. +..++.|++||++|.+|.-++ ++.++..+|++.+.++++.++ ++
T Consensus 576 ~~~e-~-G~p~~~~~~~~l~~~SP~~~----v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~ 649 (686)
T PRK10115 576 EFEE-W-GNPQDPQYYEYMKSYSPYDN----VTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMD 649 (686)
T ss_pred HHHH-h-CCCCCHHHHHHHHHcCchhc----cCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCC
Confidence 0111 1 111100 0112466554 344567568889999997776 578999999999988888888 99
Q ss_pred CCcccc
Q 038786 151 MGHSFY 156 (186)
Q Consensus 151 ~~H~~~ 156 (186)
.+|+..
T Consensus 650 ~GHg~~ 655 (686)
T PRK10115 650 SGHGGK 655 (686)
T ss_pred CCCCCC
Confidence 999954
No 62
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.39 E-value=1.6e-12 Score=98.88 Aligned_cols=160 Identities=17% Similarity=0.082 Sum_probs=90.9
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCC-Cccccc-C---------CC---
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQER-SKSELE-N---------PQ--- 69 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~-~~~~~~-~---------~~--- 69 (186)
+..+.++.+.++++|+|||+||.+++.++.++ |++++++|+++|....... .+.... . ..
T Consensus 187 l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~------P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~ 260 (383)
T PLN03084 187 LESLIDELKSDKVSLVVQGYFSPPVVKYASAH------PDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPL 260 (383)
T ss_pred HHHHHHHhCCCCceEEEECHHHHHHHHHHHhC------hHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchH
Confidence 33445555788999999999999999999987 7799999999987532110 000000 0 00
Q ss_pred -----------CCCCcHHHHHHHHHhcCCCCCCC---------CCCCcCCCC-CCCCCC--CCCCCCCEEEEeeCccccc
Q 038786 70 -----------SPLLTLDMVDKFLSFALPLNSDK---------GHPYTCPMG-PAGPPI--DGLKLPPFLLCVAGNDLIK 126 (186)
Q Consensus 70 -----------~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~~-~~~~~~--~~~~~pP~li~~g~~D~~~ 126 (186)
....+.+....+...+....... ......... .....+ ..+++ |+++++|+.|.++
T Consensus 261 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~v-PvLiI~G~~D~~v 339 (383)
T PLN03084 261 RASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKT-PITVCWGLRDRWL 339 (383)
T ss_pred HHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCC-CEEEEeeCCCCCc
Confidence 00000111111111110000000 000000000 000000 12456 9999999999886
Q ss_pred ccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 127 DTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 127 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
+. +..+.+.+. .+.+++++++++|..+. +.++++.+.|.+|+++
T Consensus 340 ~~--~~~~~~a~~-~~a~l~vIp~aGH~~~~------------E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 340 NY--DGVEDFCKS-SQHKLIELPMAGHHVQE------------DCGEELGGIISGILSK 383 (383)
T ss_pred CH--HHHHHHHHh-cCCeEEEECCCCCCcch------------hCHHHHHHHHHHHhhC
Confidence 54 234444443 36789999999998888 7899999999999864
No 63
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.39 E-value=2.2e-12 Score=94.36 Aligned_cols=162 Identities=16% Similarity=0.146 Sum_probs=87.5
Q ss_pred ccccccccC-CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHH
Q 038786 3 ENNWLTEHV-DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKF 81 (186)
Q Consensus 3 ~l~~l~~~~-~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (186)
+++++++.. +.++|+++||||||.+++.++... ..++++|+++|++........... ...+........+
T Consensus 88 ~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-------~~v~~lil~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~ 158 (274)
T TIGR03100 88 AIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-------LRVAGLVLLNPWVRTEAAQAASRI--RHYYLGQLLSADF 158 (274)
T ss_pred HHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-------CCccEEEEECCccCCcccchHHHH--HHHHHHHHhChHH
Confidence 455665543 567899999999999999887532 379999999998543221111000 0000000000011
Q ss_pred HHhcCCCCCC--------------C--CCCCcCCC-C--CCCCCCCCCCCCCEEEEeeCcccccccHHH---HHHHHHH-
Q 038786 82 LSFALPLNSD--------------K--GHPYTCPM-G--PAGPPIDGLKLPPFLLCVAGNDLIKDTEME---YYEAMKK- 138 (186)
Q Consensus 82 ~~~~~~~~~~--------------~--~~~~~~p~-~--~~~~~~~~~~~pP~li~~g~~D~~~~~~~~---~~~~l~~- 138 (186)
+..+...... . ........ . .....+..+++ |+|+++|+.|...+...+ ..+...+
T Consensus 159 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-P~ll~~g~~D~~~~~~~~~~~~~~~~~~~ 237 (274)
T TIGR03100 159 WRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQG-PVLFILSGNDLTAQEFADSVLGEPAWRGA 237 (274)
T ss_pred HHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCC-cEEEEEcCcchhHHHHHHHhccChhhHHH
Confidence 1111000000 0 00000000 0 00112333455 999999999987532211 0133333
Q ss_pred -CCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 139 -AGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 139 -~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
....+++.++++++|.+... +.++++.+.|.+||++
T Consensus 238 l~~~~v~~~~~~~~~H~l~~e-----------~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 238 LEDPGIERVEIDGADHTFSDR-----------VWREWVAARTTEWLRR 274 (274)
T ss_pred hhcCCeEEEecCCCCcccccH-----------HHHHHHHHHHHHHHhC
Confidence 12578999999999976542 5668999999999964
No 64
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.38 E-value=3.5e-12 Score=84.26 Aligned_cols=88 Identities=27% Similarity=0.400 Sum_probs=63.3
Q ss_pred CCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCC
Q 038786 11 VDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNS 90 (186)
Q Consensus 11 ~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (186)
.+.++|+++|||+||.++..++.+. ++++++|+++|+.+ .
T Consensus 58 ~~~~~i~l~G~S~Gg~~a~~~~~~~-------~~v~~~v~~~~~~~-------~-------------------------- 97 (145)
T PF12695_consen 58 PDPDRIILIGHSMGGAIAANLAARN-------PRVKAVVLLSPYPD-------S-------------------------- 97 (145)
T ss_dssp CTCCEEEEEEETHHHHHHHHHHHHS-------TTESEEEEESESSG-------C--------------------------
T ss_pred CCCCcEEEEEEccCcHHHHHHhhhc-------cceeEEEEecCccc-------h--------------------------
Confidence 3889999999999999999999865 37999999999311 0
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCcc
Q 038786 91 DKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHS 154 (186)
Q Consensus 91 ~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 154 (186)
..+...+. |+++++|++|.+++. ....+..++...+.++.+++|++|+
T Consensus 98 --------------~~~~~~~~-pv~~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 98 --------------EDLAKIRI-PVLFIHGENDPLVPP-EQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp --------------HHHTTTTS-EEEEEEETT-SSSHH-HHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred --------------hhhhccCC-cEEEEEECCCCcCCH-HHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 00111224 999999999998743 2333333444567999999999995
No 65
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.36 E-value=1.1e-11 Score=89.96 Aligned_cols=162 Identities=20% Similarity=0.175 Sum_probs=93.6
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCc----------cccc--CC---
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSK----------SELE--NP--- 68 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~----------~~~~--~~--- 68 (186)
+..+.++++.++++++||++||.+|-.+|+.+ |+++++++.++.........+ +.+. +.
T Consensus 103 i~~lld~Lg~~k~~lvgHDwGaivaw~la~~~------Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~ 176 (322)
T KOG4178|consen 103 IVALLDHLGLKKAFLVGHDWGAIVAWRLALFY------PERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPG 176 (322)
T ss_pred HHHHHHHhccceeEEEeccchhHHHHHHHHhC------hhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccC
Confidence 34566777899999999999999999999988 889999998876544111000 0000 00
Q ss_pred -CC----------------------------------CCCcHHHHHHHHHhcCCCCCCCCCCCcCCCC-C---CCCCCCC
Q 038786 69 -QS----------------------------------PLLTLDMVDKFLSFALPLNSDKGHPYTCPMG-P---AGPPIDG 109 (186)
Q Consensus 69 -~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~---~~~~~~~ 109 (186)
.+ ...+.+.+..+...+...+......+..-+. . ..-....
T Consensus 177 ~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~ 256 (322)
T KOG4178|consen 177 KPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAK 256 (322)
T ss_pred cchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccc
Confidence 00 0111222222221111100000000000000 0 0111233
Q ss_pred CCCCCEEEEeeCcccccccHHHHHHHHHHCCC-ceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 110 LKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGK-DVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 110 ~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
+.. |+++++|+.|.+.+.. .+...+++.-. ..+.++++|++|.... ++++++.+.+.+|+++
T Consensus 257 i~i-Pv~fi~G~~D~v~~~p-~~~~~~rk~vp~l~~~vv~~~~gH~vqq------------e~p~~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 257 ITI-PVLFIWGDLDPVLPYP-IFGELYRKDVPRLTERVVIEGIGHFVQQ------------EKPQEVNQAILGFINS 319 (322)
T ss_pred ccc-ceEEEEecCcccccch-hHHHHHHHhhccccceEEecCCcccccc------------cCHHHHHHHHHHHHHh
Confidence 445 9999999999988765 23333333221 2378899999999988 7899999999999985
No 66
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=5.7e-12 Score=102.96 Aligned_cols=144 Identities=19% Similarity=0.213 Sum_probs=98.8
Q ss_pred cccccc--CCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHH
Q 038786 5 NWLTEH--VDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFL 82 (186)
Q Consensus 5 ~~l~~~--~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (186)
+++.+. .|.+||.|+|+|.||.+++.++...+ ...+++.+.++|+++... ..+....+
T Consensus 597 ~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~-----~~~fkcgvavaPVtd~~~-yds~~ter-------------- 656 (755)
T KOG2100|consen 597 KKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDP-----GDVFKCGVAVAPVTDWLY-YDSTYTER-------------- 656 (755)
T ss_pred HHHHhcccccHHHeEEeccChHHHHHHHHhhhCc-----CceEEEEEEecceeeeee-ecccccHh--------------
Confidence 344444 39999999999999999999998772 146788899999998752 22221110
Q ss_pred HhcCCCCCCCC--CCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccc--cHHHHHHHHHHCCCceEEEEeCCCCcccccc
Q 038786 83 SFALPLNSDKG--HPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKD--TEMEYYEAMKKAGKDVELLVSPGMGHSFYLD 158 (186)
Q Consensus 83 ~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 158 (186)
|++...... ....++. ..+..++.|-.|++||+.|.-+. .+..+.+.|+..|++.++.+||+..|++...
T Consensus 657 --ymg~p~~~~~~y~e~~~~----~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~ 730 (755)
T KOG2100|consen 657 --YMGLPSENDKGYEESSVS----SPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYV 730 (755)
T ss_pred --hcCCCccccchhhhcccc----chhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccc
Confidence 111111111 1111121 11233445456999999997763 5789999999999999999999999999874
Q ss_pred ccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 159 KIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
+....+...+..|++.
T Consensus 731 -----------~~~~~~~~~~~~~~~~ 746 (755)
T KOG2100|consen 731 -----------EVISHLYEKLDRFLRD 746 (755)
T ss_pred -----------cchHHHHHHHHHHHHH
Confidence 3346788888888874
No 67
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.33 E-value=1.8e-12 Score=113.68 Aligned_cols=160 Identities=18% Similarity=0.235 Sum_probs=91.3
Q ss_pred ccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcc-cccCCCC---CCCcHHHHHHHH
Q 038786 7 LTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKS-ELENPQS---PLLTLDMVDKFL 82 (186)
Q Consensus 7 l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~ 82 (186)
+.++.+.++++|+||||||.+|+.++.++ |+++++++++++.......... ....... ..........+.
T Consensus 1438 ll~~l~~~~v~LvGhSmGG~iAl~~A~~~------P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 1511 (1655)
T PLN02980 1438 LIEHITPGKVTLVGYSMGARIALYMALRF------SDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFL 1511 (1655)
T ss_pred HHHHhCCCCEEEEEECHHHHHHHHHHHhC------hHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHH
Confidence 34455778999999999999999999988 7789999999875332211000 0000000 000000011111
Q ss_pred HhcCCCC-------C-----------CCCCC-----CcCCC-----CCCCCCCCCCCCCCEEEEeeCccccccc-HHHHH
Q 038786 83 SFALPLN-------S-----------DKGHP-----YTCPM-----GPAGPPIDGLKLPPFLLCVAGNDLIKDT-EMEYY 133 (186)
Q Consensus 83 ~~~~~~~-------~-----------~~~~~-----~~~p~-----~~~~~~~~~~~~pP~li~~g~~D~~~~~-~~~~~ 133 (186)
..++... . ..... ..... ....+.+..+++ |+|+++|++|.+.+. ...+.
T Consensus 1512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~-PtLlI~Ge~D~~~~~~a~~~~ 1590 (1655)
T PLN02980 1512 ENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDT-PLLLVVGEKDVKFKQIAQKMY 1590 (1655)
T ss_pred HHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCC-CEEEEEECCCCccHHHHHHHH
Confidence 1110000 0 00000 00000 000123555666 999999999987642 23444
Q ss_pred HHHHHCC--------CceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 134 EAMKKAG--------KDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 134 ~~l~~~~--------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
+.+.+.. ..++++++|+++|..+. ++++++.+.|.+||++
T Consensus 1591 ~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~l------------E~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1591 REIGKSKESGNDKGKEIIEIVEIPNCGHAVHL------------ENPLPVIRALRKFLTR 1638 (1655)
T ss_pred HHccccccccccccccceEEEEECCCCCchHH------------HCHHHHHHHHHHHHHh
Confidence 4443321 13689999999999988 7899999999999975
No 68
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.31 E-value=9.7e-13 Score=97.69 Aligned_cols=46 Identities=20% Similarity=0.191 Sum_probs=38.5
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCC
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGF 55 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~ 55 (186)
+..+.++.+.++++++||||||.+++.++.++ |++++++|++++..
T Consensus 85 l~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~------p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 85 IEKLREKLGIKNWLVFGGSWGSTLALAYAQTH------PEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHcCCCCEEEEEECHHHHHHHHHHHHC------hHhhhhheeecccc
Confidence 44556666788999999999999999999988 66899999987754
No 69
>PLN02511 hydrolase
Probab=99.30 E-value=3.5e-12 Score=97.53 Aligned_cols=52 Identities=27% Similarity=0.331 Sum_probs=38.0
Q ss_pred CCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCcccccc
Q 038786 105 PPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLD 158 (186)
Q Consensus 105 ~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 158 (186)
..+..+++ |+|+++|++|++++... ....+.+....+++.++++++|.....
T Consensus 292 ~~L~~I~v-PtLiI~g~dDpi~p~~~-~~~~~~~~~p~~~l~~~~~gGH~~~~E 343 (388)
T PLN02511 292 DSIKHVRV-PLLCIQAANDPIAPARG-IPREDIKANPNCLLIVTPSGGHLGWVA 343 (388)
T ss_pred hhhccCCC-CeEEEEcCCCCcCCccc-CcHhHHhcCCCEEEEECCCcceecccc
Confidence 34566777 99999999999886431 112334456679999999999988763
No 70
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.27 E-value=3e-13 Score=91.39 Aligned_cols=151 Identities=16% Similarity=0.181 Sum_probs=95.4
Q ss_pred ccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCC----------CCCC---C
Q 038786 7 LTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENP----------QSPL---L 73 (186)
Q Consensus 7 l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~----------~~~~---~ 73 (186)
|.+.++.+++.|+|+|-||..|+.+|.++ ++.+..++.+..............++. +.++ .
T Consensus 107 LM~aLk~~~fsvlGWSdGgiTalivAak~------~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Y 180 (277)
T KOG2984|consen 107 LMEALKLEPFSVLGWSDGGITALIVAAKG------KEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHY 180 (277)
T ss_pred HHHHhCCCCeeEeeecCCCeEEEEeeccC------hhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhc
Confidence 44556899999999999999999999988 567888888766544333211111110 1111 1
Q ss_pred cHHHHHHHHHhcCCC----CCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCccccccc-HHHHHHHHHHCCCceEEEEe
Q 038786 74 TLDMVDKFLSFALPL----NSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDT-EMEYYEAMKKAGKDVELLVS 148 (186)
Q Consensus 74 ~~~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~-~~~~~~~l~~~~~~~~~~~~ 148 (186)
..+.+...|..+... .......++ ...+.++++ |+||+||++|+++.. ...|...+.. ..++++.
T Consensus 181 g~e~f~~~wa~wvD~v~qf~~~~dG~fC------r~~lp~vkc-Ptli~hG~kDp~~~~~hv~fi~~~~~---~a~~~~~ 250 (277)
T KOG2984|consen 181 GPETFRTQWAAWVDVVDQFHSFCDGRFC------RLVLPQVKC-PTLIMHGGKDPFCGDPHVCFIPVLKS---LAKVEIH 250 (277)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCCchH------hhhcccccC-CeeEeeCCcCCCCCCCCccchhhhcc---cceEEEc
Confidence 222222222211100 000111111 123555677 999999999999763 3455544443 4689999
Q ss_pred CCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 149 PGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 149 ~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
|.+.|.++. ..++++...+++||++
T Consensus 251 peGkHn~hL------------rya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 251 PEGKHNFHL------------RYAKEFNKLVLDFLKS 275 (277)
T ss_pred cCCCcceee------------echHHHHHHHHHHHhc
Confidence 999999998 6689999999999986
No 71
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.26 E-value=5e-11 Score=81.79 Aligned_cols=130 Identities=18% Similarity=0.195 Sum_probs=73.1
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSD 91 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (186)
..+.+.|+|.||||..|..++.++ .+++ |+++|.+..........-...... +.+. ..
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~--------~~~a-vLiNPav~p~~~l~~~iG~~~~~~-~~e~------------~~ 114 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERY--------GLPA-VLINPAVRPYELLQDYIGEQTNPY-TGES------------YE 114 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHh--------CCCE-EEEcCCCCHHHHHHHhhCccccCC-CCcc------------ce
Confidence 455699999999999999999988 3555 899998865332111110000000 0000 00
Q ss_pred CCCCCcCCCCCC-CCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhH
Q 038786 92 KGHPYTCPMGPA-GPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAA 170 (186)
Q Consensus 92 ~~~~~~~p~~~~-~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 170 (186)
........+... ..... ... ++++++++.|.++|.... .++.. .+...+.+|++|.|..
T Consensus 115 ~~~~~~~~l~~l~~~~~~-~~~-~~lvll~~~DEvLd~~~a-~~~~~----~~~~~i~~ggdH~f~~------------- 174 (187)
T PF05728_consen 115 LTEEHIEELKALEVPYPT-NPE-RYLVLLQTGDEVLDYREA-VAKYR----GCAQIIEEGGDHSFQD------------- 174 (187)
T ss_pred echHhhhhcceEeccccC-CCc-cEEEEEecCCcccCHHHH-HHHhc----CceEEEEeCCCCCCcc-------------
Confidence 000000000000 00011 112 899999999999876333 33333 2344567888999955
Q ss_pred HHHHHHHHHHHHhh
Q 038786 171 QTCGLFQGIAEFMR 184 (186)
Q Consensus 171 ~~~~~~~~i~~fl~ 184 (186)
.++.+..|.+|+.
T Consensus 175 -f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 175 -FEEYLPQIIAFLQ 187 (187)
T ss_pred -HHHHHHHHHHhhC
Confidence 6778888999873
No 72
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.24 E-value=1.3e-11 Score=84.85 Aligned_cols=129 Identities=22% Similarity=0.353 Sum_probs=97.2
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHH
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFL 82 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (186)
.++||+.+++..+|.++|..+||.++..+.... + .+.+++.++|.....
T Consensus 109 v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~------~-~f~a~v~~hps~~d~------------------------ 157 (242)
T KOG3043|consen 109 VVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKD------P-EFDAGVSFHPSFVDS------------------------ 157 (242)
T ss_pred HHHHHHHcCCcceeeEEEEeecceEEEEeeccc------h-hheeeeEecCCcCCh------------------------
Confidence 468999888899999999999999988888755 3 788999988864210
Q ss_pred HhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCccccccc--HHHHHHHHHHCC-CceEEEEeCCCCccccccc
Q 038786 83 SFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDT--EMEYYEAMKKAG-KDVELLVSPGMGHSFYLDK 159 (186)
Q Consensus 83 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~ 159 (186)
..+..++. |+|++.|+.|.++|. ..++.+++++.. ..+++++|+|.+|+|...
T Consensus 158 ----------------------~D~~~vk~-Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~- 213 (242)
T KOG3043|consen 158 ----------------------ADIANVKA-PILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVAR- 213 (242)
T ss_pred ----------------------hHHhcCCC-CEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhh-
Confidence 01122345 999999999988764 356666666542 346899999999999852
Q ss_pred cccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 160 IAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
.....+|+.+...++..+.+.+|++++
T Consensus 214 r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 214 RANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred ccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 112446777789999999999999863
No 73
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.23 E-value=1.6e-11 Score=86.87 Aligned_cols=47 Identities=32% Similarity=0.451 Sum_probs=41.4
Q ss_pred cccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCC
Q 038786 2 RENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPG 54 (186)
Q Consensus 2 ~~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~ 54 (186)
+.++.++++.+.++++++||||||.+++.++.++ |++++++++++++
T Consensus 32 ~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~------p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 32 ADLEALREALGIKKINLVGHSMGGMLALEYAAQY------PERVKKLVLISPP 78 (230)
T ss_dssp HHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHS------GGGEEEEEEESES
T ss_pred HHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHC------chhhcCcEEEeee
Confidence 3456677777888999999999999999999998 7799999999996
No 74
>PRK10985 putative hydrolase; Provisional
Probab=99.23 E-value=7.5e-12 Score=93.65 Aligned_cols=148 Identities=18% Similarity=0.195 Sum_probs=79.3
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCC---CCCCcHHH--
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQ---SPLLTLDM-- 77 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~---~~~~~~~~-- 77 (186)
+++|+.++.+.++++++||||||++++.++.++.. ...+.+++++++..+............. ..++....
T Consensus 120 ~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~----~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 195 (324)
T PRK10985 120 FLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGD----DLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKA 195 (324)
T ss_pred HHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCC----CCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 45667766667789999999999999988887632 1248888888887654321110000000 00000000
Q ss_pred -HHHHHHhcCCCCCCC--------------CCCCcCCCC------------CCCCCCCCCCCCCEEEEeeCcccccccHH
Q 038786 78 -VDKFLSFALPLNSDK--------------GHPYTCPMG------------PAGPPIDGLKLPPFLLCVAGNDLIKDTEM 130 (186)
Q Consensus 78 -~~~~~~~~~~~~~~~--------------~~~~~~p~~------------~~~~~~~~~~~pP~li~~g~~D~~~~~~~ 130 (186)
.......+ ...... +.....+.. ...+.+..+++ |+++++|++|++++.
T Consensus 196 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~-P~lii~g~~D~~~~~-- 271 (324)
T PRK10985 196 NAARKLAAY-PGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRK-PTLIIHAKDDPFMTH-- 271 (324)
T ss_pred HHHHHHHhc-cccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCC-CEEEEecCCCCCCCh--
Confidence 00000000 000000 000001100 01123455566 999999999998753
Q ss_pred HHHHHHHHCCCceEEEEeCCCCcccccc
Q 038786 131 EYYEAMKKAGKDVELLVSPGMGHSFYLD 158 (186)
Q Consensus 131 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 158 (186)
+....+.+....+++.++++++|.....
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~GH~~~~~ 299 (324)
T PRK10985 272 EVIPKPESLPPNVEYQLTEHGGHVGFVG 299 (324)
T ss_pred hhChHHHHhCCCeEEEECCCCCceeeCC
Confidence 2233344455678999999999987764
No 75
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.19 E-value=5.2e-10 Score=81.80 Aligned_cols=58 Identities=21% Similarity=0.150 Sum_probs=42.2
Q ss_pred CCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 111 KLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 111 ~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
++ |++++.|++|..+|. +..+.+.+.-...+++.++ ++|.... ++++++.+.|.++..
T Consensus 211 ~v-P~l~I~g~~D~~ip~--~~~~~m~~~~~~~~~~~l~-~gH~p~l------------s~P~~~~~~i~~~a~ 268 (273)
T PLN02211 211 KV-PRVYIKTLHDHVVKP--EQQEAMIKRWPPSQVYELE-SDHSPFF------------STPFLLFGLLIKAAA 268 (273)
T ss_pred cc-ceEEEEeCCCCCCCH--HHHHHHHHhCCccEEEEEC-CCCCccc------------cCHHHHHHHHHHHHH
Confidence 35 999999999998764 3344444433345788887 7998887 678888888877654
No 76
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.19 E-value=1e-10 Score=79.79 Aligned_cols=111 Identities=23% Similarity=0.306 Sum_probs=81.4
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSD 91 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (186)
+.+||.+.|.||||.+|++.+..+ +..+.+....+++..... .. +
T Consensus 91 ~~~rI~igGfs~G~a~aL~~~~~~------~~~l~G~~~~s~~~p~~~---~~--------------------~------ 135 (206)
T KOG2112|consen 91 PSNRIGIGGFSQGGALALYSALTY------PKALGGIFALSGFLPRAS---IG--------------------L------ 135 (206)
T ss_pred CccceeEcccCchHHHHHHHHhcc------ccccceeeccccccccch---hh--------------------c------
Confidence 788999999999999999999988 456777777777653110 00 0
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCEEEEeeCccccccc--HHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchh
Q 038786 92 KGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDT--EMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTA 169 (186)
Q Consensus 92 ~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 169 (186)
+..-+ ..+.+|++..||+.|+++|. .....+.|...+..++++.|+|..|....
T Consensus 136 ---~~~~~---------~~~~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~------------ 191 (206)
T KOG2112|consen 136 ---PGWLP---------GVNYTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSP------------ 191 (206)
T ss_pred ---cCCcc---------ccCcchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccH------------
Confidence 00000 01134999999999999884 57888899999999999999999998743
Q ss_pred HHHHHHHHHHHHHhhh
Q 038786 170 AQTCGLFQGIAEFMRK 185 (186)
Q Consensus 170 ~~~~~~~~~i~~fl~~ 185 (186)
+-++++..|+++
T Consensus 192 ----~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 192 ----QELDDLKSWIKT 203 (206)
T ss_pred ----HHHHHHHHHHHH
Confidence 335667777654
No 77
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=1.3e-10 Score=90.77 Aligned_cols=150 Identities=20% Similarity=0.100 Sum_probs=102.0
Q ss_pred cccccccccC---CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHH
Q 038786 2 RENNWLTEHV---DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMV 78 (186)
Q Consensus 2 ~~l~~l~~~~---~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (186)
+.++||.++. |++||.|-|+|-||++++....++ |+-++.+|.=+|+.++.......
T Consensus 712 eglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~------P~IfrvAIAGapVT~W~~YDTgY-------------- 771 (867)
T KOG2281|consen 712 EGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQY------PNIFRVAIAGAPVTDWRLYDTGY-------------- 771 (867)
T ss_pred HHHHHHHHhcCcccchheeEeccccccHHHHHHhhcC------cceeeEEeccCcceeeeeecccc--------------
Confidence 4678888876 999999999999999999999988 77899999999988764322111
Q ss_pred HHHHHhcCCCCCCCCCCCc-CCCCCCCCCCCCCCCCCEEEEeeCcccccc--cHHHHHHHHHHCCCceEEEEeCCCCccc
Q 038786 79 DKFLSFALPLNSDKGHPYT-CPMGPAGPPIDGLKLPPFLLCVAGNDLIKD--TEMEYYEAMKKAGKDVELLVSPGMGHSF 155 (186)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 155 (186)
...|++-.....+.+. +....-.+.+..... ..+++||--|.-+. ....+...|.++|++.++++||+..|..
T Consensus 772 ---TERYMg~P~~nE~gY~agSV~~~Veklpdepn-RLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsi 847 (867)
T KOG2281|consen 772 ---TERYMGYPDNNEHGYGAGSVAGHVEKLPDEPN-RLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSI 847 (867)
T ss_pred ---hhhhcCCCccchhcccchhHHHHHhhCCCCCc-eEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEcccccccc
Confidence 1113222211111111 111111222332222 58999999995543 4567788888999999999999999999
Q ss_pred cccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 156 YLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
... +...-+-..++.|+++.
T Consensus 848 R~~-----------es~~~yE~rll~FlQ~~ 867 (867)
T KOG2281|consen 848 RNP-----------ESGIYYEARLLHFLQEN 867 (867)
T ss_pred CCC-----------ccchhHHHHHHHHHhhC
Confidence 763 34556667888998863
No 78
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.15 E-value=4.4e-10 Score=79.18 Aligned_cols=110 Identities=18% Similarity=0.107 Sum_probs=63.9
Q ss_pred cccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCc-ccccCCCCCCCcHHHHHH
Q 038786 4 NNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSK-SELENPQSPLLTLDMVDK 80 (186)
Q Consensus 4 l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 80 (186)
++++.++. +.++|+|+||||||.+++.++.++ |+.+++++.+++......... ........ ......+..
T Consensus 83 i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~------p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 155 (212)
T TIGR01840 83 IDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTY------PDVFAGGASNAGLPYGEASSSISATPQMCT-AATAASVCR 155 (212)
T ss_pred HHHHHHhcCcChhheEEEEECHHHHHHHHHHHhC------chhheEEEeecCCcccccccchhhHhhcCC-CCCHHHHHH
Confidence 34444433 678999999999999999999987 678999999887653221110 00000000 000011111
Q ss_pred HHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccc--cHHHHHHHHHHC
Q 038786 81 FLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKD--TEMEYYEAMKKA 139 (186)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~ 139 (186)
..... . .... ...||++++||++|.+++ .+..+.+++++.
T Consensus 156 ~~~~~---------------~---~~~~-~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 156 LVRGM---------------Q---SEYN-GPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHhcc---------------C---Cccc-CCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 11100 0 0011 235578999999998886 457888888765
No 79
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.14 E-value=5.7e-10 Score=78.07 Aligned_cols=145 Identities=21% Similarity=0.248 Sum_probs=80.7
Q ss_pred CceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEec---CCCCCCCCCCcccc---------c--CCC-CCCCcHHHH
Q 038786 14 QRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPI---HPGFLRQERSKSEL---------E--NPQ-SPLLTLDMV 78 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~---~p~~~~~~~~~~~~---------~--~~~-~~~~~~~~~ 78 (186)
....+.||||||.+|-.+|.+....+.. +.++.+. .|..+......... + ... ..+.+.+.+
T Consensus 74 ~P~alfGHSmGa~lAfEvArrl~~~g~~---p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~ 150 (244)
T COG3208 74 APFALFGHSMGAMLAFEVARRLERAGLP---PRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELM 150 (244)
T ss_pred CCeeecccchhHHHHHHHHHHHHHcCCC---cceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHH
Confidence 4699999999999999999999776653 4444333 23111111000000 0 001 111223333
Q ss_pred HHHHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHH-CCCceEEEEeCCCCccccc
Q 038786 79 DKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKK-AGKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~H~~~~ 157 (186)
..+.... ..+......|..+ .. ..+.+ |+.++.|++|..+ +.+....+++ .+...+++.++| +|.|..
T Consensus 151 ~l~LPil-RAD~~~~e~Y~~~-----~~-~pl~~-pi~~~~G~~D~~v--s~~~~~~W~~~t~~~f~l~~fdG-gHFfl~ 219 (244)
T COG3208 151 ALFLPIL-RADFRALESYRYP-----PP-APLAC-PIHAFGGEKDHEV--SRDELGAWREHTKGDFTLRVFDG-GHFFLN 219 (244)
T ss_pred HHHHHHH-HHHHHHhcccccC-----CC-CCcCc-ceEEeccCcchhc--cHHHHHHHHHhhcCCceEEEecC-cceehh
Confidence 3333211 0000001111110 01 12445 9999999999985 3444444443 456889999996 799987
Q ss_pred cccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 158 DKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
++.+++++.|.+.+.
T Consensus 220 ------------~~~~~v~~~i~~~l~ 234 (244)
T COG3208 220 ------------QQREEVLARLEQHLA 234 (244)
T ss_pred ------------hhHHHHHHHHHHHhh
Confidence 678888888888874
No 80
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=99.13 E-value=2.2e-10 Score=88.63 Aligned_cols=67 Identities=19% Similarity=0.345 Sum_probs=60.6
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccc
Q 038786 91 DKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDK 159 (186)
Q Consensus 91 ~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 159 (186)
...+|+++|+++..+.+.. +||+.|+.+.-|+.+|+..-|+++|+..|..+.+.+.++..|+|....
T Consensus 768 VpkdPf~SP~~A~de~l~q--LPp~~i~ac~mDP~LDD~vmfA~kLr~lG~~v~l~vle~lPHGFLnft 834 (880)
T KOG4388|consen 768 VPKDPFMSPLLAPDEMLKQ--LPPVHIVACAMDPMLDDSVMFARKLRNLGQPVTLRVLEDLPHGFLNFT 834 (880)
T ss_pred CCCCcccCcccCChHHHhc--CCCceEEEeccCcchhHHHHHHHHHHhcCCceeehhhhcCCccceeHH
Confidence 3468888999888888855 999999999999999999999999999999999999999999999753
No 81
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.11 E-value=2e-09 Score=82.74 Aligned_cols=108 Identities=19% Similarity=0.232 Sum_probs=76.5
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSD 91 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (186)
+.++.+|+|+||||..|+.+++++ |+.+.+++.+||.+...... .. ... ++...+. .
T Consensus 286 d~~~~~IaG~S~GGl~AL~~al~~------Pd~Fg~v~s~Sgs~ww~~~~----~~------~~~---~l~~~l~-~--- 342 (411)
T PRK10439 286 DADRTVVAGQSFGGLAALYAGLHW------PERFGCVLSQSGSFWWPHRG----GQ------QEG---VLLEQLK-A--- 342 (411)
T ss_pred CccceEEEEEChHHHHHHHHHHhC------cccccEEEEeccceecCCcc----CC------chh---HHHHHHH-h---
Confidence 788999999999999999999988 88999999999976432210 00 001 1111110 0
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcc-cccccHHHHHHHHHHCCCceEEEEeCCCCccccc
Q 038786 92 KGHPYTCPMGPAGPPIDGLKLPPFLLCVAGND-LIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 92 ~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 157 (186)
.......+ .++|.+|+.| .+++.++.+.+.|++.|.++++.+++| +|.+..
T Consensus 343 -------------~~~~~~~l-r~~i~~G~~E~~~~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~~~ 394 (411)
T PRK10439 343 -------------GEVSARGL-RIVLEAGRREPMIMRANQALYAQLHPAGHSVFWRQVDG-GHDALC 394 (411)
T ss_pred -------------cccCCCCc-eEEEeCCCCCchHHHHHHHHHHHHHHCCCcEEEEECCC-CcCHHH
Confidence 00000112 6899999988 555678999999999999999999998 598754
No 82
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.09 E-value=6.4e-11 Score=81.17 Aligned_cols=143 Identities=17% Similarity=0.188 Sum_probs=89.7
Q ss_pred ccccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHH
Q 038786 3 ENNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDK 80 (186)
Q Consensus 3 ~l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (186)
+++||..+. +..+++|.|-|.||.+|..+|.+. .+++.++++-+.+........... -++.-.-...+
T Consensus 136 vldyl~t~~~~dktkivlfGrSlGGAvai~lask~------~~ri~~~ivENTF~SIp~~~i~~v----~p~~~k~i~~l 205 (300)
T KOG4391|consen 136 VLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKN------SDRISAIIVENTFLSIPHMAIPLV----FPFPMKYIPLL 205 (300)
T ss_pred HHHHHhcCccCCcceEEEEecccCCeeEEEeeccc------hhheeeeeeechhccchhhhhhee----ccchhhHHHHH
Confidence 466776654 778999999999999999999988 458999999887765422111110 00000000011
Q ss_pred HHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCC-CceEEEEeCCCCccccccc
Q 038786 81 FLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAG-KDVELLVSPGMGHSFYLDK 159 (186)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~ 159 (186)
+.+ +.+.+ ...+..-++ |.|++.|.+|.++|. ..+.+....++ ...++.+||++.|.-...
T Consensus 206 c~k----------n~~~S-----~~ki~~~~~-P~LFiSGlkDelVPP-~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i- 267 (300)
T KOG4391|consen 206 CYK----------NKWLS-----YRKIGQCRM-PFLFISGLKDELVPP-VMMRQLYELCPSRTKRLAEFPDGTHNDTWI- 267 (300)
T ss_pred HHH----------hhhcc-----hhhhccccC-ceEEeecCccccCCc-HHHHHHHHhCchhhhhheeCCCCccCceEE-
Confidence 111 01111 112333335 999999999999865 34444445443 246899999999987652
Q ss_pred cccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 160 IAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
.+..++.|.+|+.+
T Consensus 268 ------------~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 268 ------------CDGYFQAIEDFLAE 281 (300)
T ss_pred ------------eccHHHHHHHHHHH
Confidence 46678888899865
No 83
>PLN00021 chlorophyllase
Probab=99.06 E-value=3.9e-09 Score=78.43 Aligned_cols=139 Identities=17% Similarity=0.237 Sum_probs=83.0
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSD 91 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (186)
+.++++|+||||||.+|+.++.+..+... +.++++++++.|+....... . ..+..
T Consensus 124 d~~~v~l~GHS~GG~iA~~lA~~~~~~~~-~~~v~ali~ldPv~g~~~~~-----~-~~p~i------------------ 178 (313)
T PLN00021 124 DLSKLALAGHSRGGKTAFALALGKAAVSL-PLKFSALIGLDPVDGTSKGK-----Q-TPPPV------------------ 178 (313)
T ss_pred ChhheEEEEECcchHHHHHHHhhcccccc-ccceeeEEeecccccccccc-----C-CCCcc------------------
Confidence 66899999999999999999988754322 34789999999985432110 0 00000
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCEEEEeeCccc-----cc----ccHHHHHHHHHHCCCceEEEEeCCCCcccccccc--
Q 038786 92 KGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDL-----IK----DTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKI-- 160 (186)
Q Consensus 92 ~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~-----~~----~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~-- 160 (186)
. ...+ ..+. +.+ |+|++.++.|. ++ +......+.+.++..+..+.+.++++|.-..+..
T Consensus 179 --l-~~~~-----~s~~-~~~-P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~~~~ 248 (313)
T PLN00021 179 --L-TYAP-----HSFN-LDI-PVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDMLDDDTS 248 (313)
T ss_pred --c-ccCc-----cccc-CCC-CeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceeecCCCc
Confidence 0 0000 0011 335 89999998663 22 2333334444666667888899999998764322
Q ss_pred c---------cCCCcchhHHHHHHHHHHHHHhhh
Q 038786 161 A---------VDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 161 ~---------~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
+ -..++......+.+.-.+..||+.
T Consensus 249 ~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~ 282 (313)
T PLN00021 249 GIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKA 282 (313)
T ss_pred cccccccccccCCCCchHHHHHHHHHHHHHHHHH
Confidence 0 011233445556666677778764
No 84
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.06 E-value=7.8e-10 Score=74.46 Aligned_cols=114 Identities=23% Similarity=0.309 Sum_probs=79.7
Q ss_pred cccccccccC-CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHH
Q 038786 2 RENNWLTEHV-DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDK 80 (186)
Q Consensus 2 ~~l~~l~~~~-~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (186)
.+++|++++. +..-..|+|+|.|+.|++.++.+.. .+...+.++|..+..+
T Consensus 90 aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~-------e~~~~is~~p~~~~~d--------------------- 141 (210)
T COG2945 90 AALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRP-------EILVFISILPPINAYD--------------------- 141 (210)
T ss_pred HHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcc-------cccceeeccCCCCchh---------------------
Confidence 4789998876 4444589999999999999999872 4666677777654100
Q ss_pred HHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHH-HCCCceEEEEeCCCCccccccc
Q 038786 81 FLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMK-KAGKDVELLVSPGMGHSFYLDK 159 (186)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~H~~~~~~ 159 (186)
++ + +..... |.++++|+.|.+++- ...++ +.+.+.++++++++.|.|+.
T Consensus 142 fs--~---------------------l~P~P~-~~lvi~g~~Ddvv~l----~~~l~~~~~~~~~~i~i~~a~HFF~g-- 191 (210)
T COG2945 142 FS--F---------------------LAPCPS-PGLVIQGDADDVVDL----VAVLKWQESIKITVITIPGADHFFHG-- 191 (210)
T ss_pred hh--h---------------------ccCCCC-CceeEecChhhhhcH----HHHHHhhcCCCCceEEecCCCceecc--
Confidence 00 1 111223 899999999977543 33332 22367899999999999975
Q ss_pred cccCCCcchhHHHHHHHHHHHHHhh
Q 038786 160 IAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
+...+.+.+.+|+.
T Consensus 192 -----------Kl~~l~~~i~~~l~ 205 (210)
T COG2945 192 -----------KLIELRDTIADFLE 205 (210)
T ss_pred -----------cHHHHHHHHHHHhh
Confidence 46778888888883
No 85
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.05 E-value=5.2e-11 Score=88.48 Aligned_cols=157 Identities=20% Similarity=0.217 Sum_probs=83.7
Q ss_pred cccccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHH
Q 038786 2 RENNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVD 79 (186)
Q Consensus 2 ~~l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (186)
+++++|.... |.++|.+.|.|.||.+++.+|.-. ++|+++++..|++.--...... .....++ ..+.
T Consensus 161 ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd-------~rv~~~~~~vP~l~d~~~~~~~-~~~~~~y---~~~~ 229 (320)
T PF05448_consen 161 RAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD-------PRVKAAAADVPFLCDFRRALEL-RADEGPY---PEIR 229 (320)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS-------ST-SEEEEESESSSSHHHHHHH-T--STTT---HHHH
T ss_pred HHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC-------ccccEEEecCCCccchhhhhhc-CCccccH---HHHH
Confidence 4566676554 788999999999999999999855 3799999999976321110000 0001111 1222
Q ss_pred HHHHhcCCCCCCCCCC-CcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCcccccc
Q 038786 80 KFLSFALPLNSDKGHP-YTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLD 158 (186)
Q Consensus 80 ~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 158 (186)
.|++............ ..-.+++..+--+.+++ |+++..|-.|.++|.+..|+. ......+.++.+||..+|....
T Consensus 230 ~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~-pvl~~~gl~D~~cPP~t~fA~-yN~i~~~K~l~vyp~~~He~~~- 306 (320)
T PF05448_consen 230 RYFRWRDPHHEREPEVFETLSYFDAVNFARRIKC-PVLFSVGLQDPVCPPSTQFAA-YNAIPGPKELVVYPEYGHEYGP- 306 (320)
T ss_dssp HHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--S-EEEEEEETT-SSS-HHHHHHH-HCC--SSEEEEEETT--SSTTH-
T ss_pred HHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCC-CEEEEEecCCCCCCchhHHHH-HhccCCCeeEEeccCcCCCchh-
Confidence 2222110000000000 00001111111122446 999999999999988766653 3333446899999999997743
Q ss_pred ccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 159 KIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
+...+...+||++|
T Consensus 307 --------------~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 307 --------------EFQEDKQLNFLKEH 320 (320)
T ss_dssp --------------HHHHHHHHHHHHH-
T ss_pred --------------hHHHHHHHHHHhcC
Confidence 22256788888875
No 86
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.04 E-value=2.3e-09 Score=84.48 Aligned_cols=56 Identities=13% Similarity=0.046 Sum_probs=38.8
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCC
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQE 59 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~ 59 (186)
+++.+.+..+.++++++||||||.+++..+..+... ..++++++++++...++...
T Consensus 251 al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~-~~~~rv~slvll~t~~Df~~ 306 (532)
T TIGR01838 251 ALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAAR-GDDKRIKSATFFTTLLDFSD 306 (532)
T ss_pred HHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHh-CCCCccceEEEEecCcCCCC
Confidence 566677777889999999999999864422111100 01457999999988887654
No 87
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.02 E-value=3.8e-09 Score=77.00 Aligned_cols=59 Identities=24% Similarity=0.272 Sum_probs=50.5
Q ss_pred CEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 114 PFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 114 P~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
|||+++|.++..++ .+...++++.-+.++++++++++|+.+. |+++++++.|.+|+.++
T Consensus 255 pvlfi~g~~S~fv~--~~~~~~~~~~fp~~e~~~ld~aGHwVh~------------E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 255 PVLFIKGLQSKFVP--DEHYPRMEKIFPNVEVHELDEAGHWVHL------------EKPEEFIESISEFLEEP 313 (315)
T ss_pred ceeEEecCCCCCcC--hhHHHHHHHhccchheeecccCCceeec------------CCHHHHHHHHHHHhccc
Confidence 99999999998865 3445566666677999999999999998 78999999999998764
No 88
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.02 E-value=3.1e-10 Score=77.19 Aligned_cols=123 Identities=14% Similarity=0.161 Sum_probs=83.0
Q ss_pred cccccccC-CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHH
Q 038786 4 NNWLTEHV-DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFL 82 (186)
Q Consensus 4 l~~l~~~~-~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (186)
++|+.+.. +.+.+.+.|||+|+++|+....+.. .++|.|++++++.++....... +...+.-++
T Consensus 125 v~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r-----~prI~gl~l~~GvY~l~EL~~t--e~g~dlgLt-------- 189 (270)
T KOG4627|consen 125 VNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQR-----SPRIWGLILLCGVYDLRELSNT--ESGNDLGLT-------- 189 (270)
T ss_pred HHHHHHhcccceeEEEcccchHHHHHHHHHHHhc-----CchHHHHHHHhhHhhHHHHhCC--ccccccCcc--------
Confidence 56666654 6778999999999999999998874 3589999999999875331111 000111111
Q ss_pred HhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcc--cccccHHHHHHHHHHCCCceEEEEeCCCCccccc
Q 038786 83 SFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGND--LIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 83 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 157 (186)
......+|+... .+..+++ |+|++.|+.| .+..+++.|+..+.+ .++..++|.+|.-..
T Consensus 190 --------~~~ae~~Scdl~---~~~~v~~-~ilVv~~~~espklieQnrdf~~q~~~----a~~~~f~n~~hy~I~ 250 (270)
T KOG4627|consen 190 --------ERNAESVSCDLW---EYTDVTV-WILVVAAEHESPKLIEQNRDFADQLRK----ASFTLFKNYDHYDII 250 (270)
T ss_pred --------cchhhhcCccHH---HhcCcee-eeeEeeecccCcHHHHhhhhHHHHhhh----cceeecCCcchhhHH
Confidence 111122333222 2555667 8999999999 556678899888876 578899999997665
No 89
>PLN02872 triacylglycerol lipase
Probab=99.01 E-value=4.3e-09 Score=80.53 Aligned_cols=62 Identities=19% Similarity=0.338 Sum_probs=43.6
Q ss_pred CEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 114 PFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 114 P~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
|+++++|++|.+++. ....+.++......+++.+++++|.-..... +.++++.+.|.+|+++
T Consensus 327 Pv~i~~G~~D~lv~~-~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~---------eape~V~~~Il~fL~~ 388 (395)
T PLN02872 327 PLWMGYGGTDGLADV-TDVEHTLAELPSKPELLYLENYGHIDFLLST---------SAKEDVYNHMIQFFRS 388 (395)
T ss_pred cEEEEEcCCCCCCCH-HHHHHHHHHCCCccEEEEcCCCCCHHHHhCc---------chHHHHHHHHHHHHHH
Confidence 999999999998753 2333333443333688889999996222110 6688899999999975
No 90
>COG0627 Predicted esterase [General function prediction only]
Probab=98.98 E-value=1.2e-09 Score=80.62 Aligned_cols=144 Identities=18% Similarity=0.168 Sum_probs=90.1
Q ss_pred ceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCCCCC
Q 038786 15 RVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGH 94 (186)
Q Consensus 15 ~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (186)
+..++||||||+=|+.+|+++ |++++.+..++|.++........ ...... .-......+++.......
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~------pd~f~~~sS~Sg~~~~s~~~~~~-~~~~~~-----~g~~~~~~~~G~~~~~~w 220 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKH------PDRFKSASSFSGILSPSSPWGPT-LAMGDP-----WGGKAFNAMLGPDSDPAW 220 (316)
T ss_pred CceeEEEeccchhhhhhhhhC------cchhceecccccccccccccccc-cccccc-----ccCccHHHhcCCCccccc
Confidence 789999999999999999999 77999999999998765322111 000000 000011113322211111
Q ss_pred CCcCCCCCCC----C------CCCCCCCCCEEEEeeCcccccc-c---HHHHHHHHHHCCCceEEEEeCCCCcccccccc
Q 038786 95 PYTCPMGPAG----P------PIDGLKLPPFLLCVAGNDLIKD-T---EMEYYEAMKKAGKDVELLVSPGMGHSFYLDKI 160 (186)
Q Consensus 95 ~~~~p~~~~~----~------~~~~~~~pP~li~~g~~D~~~~-~---~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 160 (186)
....|..... . ... ...+++++-+|..|.+.. . ...+.+++.+.+.+..+...+++.|.|.+
T Consensus 221 ~~~D~~~~~~~l~~~~~~~~~~~~-~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~~--- 296 (316)
T COG0627 221 QENDPLSLIEKLVANANTRIWVYG-GSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWYF--- 296 (316)
T ss_pred cccCchhHHHHhhhcccccceecc-cCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHHH---
Confidence 1111111000 0 001 034588888999997764 2 68999999999999999999999999976
Q ss_pred ccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 161 AVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
....+.....|+.+
T Consensus 297 -----------w~~~l~~~~~~~a~ 310 (316)
T COG0627 297 -----------WASQLADHLPWLAG 310 (316)
T ss_pred -----------HHHHHHHHHHHHHH
Confidence 56666777777653
No 91
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.96 E-value=1.3e-08 Score=83.90 Aligned_cols=153 Identities=16% Similarity=0.183 Sum_probs=86.1
Q ss_pred CCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcc-c-ccCCCC------CCC-----------
Q 038786 13 FQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKS-E-LENPQS------PLL----------- 73 (186)
Q Consensus 13 ~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~-~-~~~~~~------~~~----------- 73 (186)
..+|.++|.|+||.++..+|... ++.++++|..+++.++...... . .....+ ..+
T Consensus 337 nGkVGm~G~SY~G~~~~~aAa~~------pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~ 410 (767)
T PRK05371 337 NGKVAMTGKSYLGTLPNAVATTG------VEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLA 410 (767)
T ss_pred CCeeEEEEEcHHHHHHHHHHhhC------CCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCc
Confidence 46999999999999999998866 6789999998887653221100 0 000000 000
Q ss_pred -----cHHHHHHHHHhcCCCCCCCCCCCcCCCCCC---CCCCCCCCCCCEEEEeeCcccccc--cHHHHHHHHHHCCCce
Q 038786 74 -----TLDMVDKFLSFALPLNSDKGHPYTCPMGPA---GPPIDGLKLPPFLLCVAGNDLIKD--TEMEYYEAMKKAGKDV 143 (186)
Q Consensus 74 -----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~ 143 (186)
.......+...+.. ..........+.+.. ...+..+++ |+|++||..|..++ ....+.+.+++.+.+.
T Consensus 411 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~y~~fW~~rn~~~~~~kIkv-PvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pk 488 (767)
T PRK05371 411 GDYLRHNEACEKLLAELTA-AQDRKTGDYNDFWDDRNYLKDADKIKA-SVLVVHGLNDWNVKPKQVYQWWDALPENGVPK 488 (767)
T ss_pred chhhcchHHHHHHHhhhhh-hhhhcCCCccHHHHhCCHhhHhhCCCC-CEEEEeeCCCCCCChHHHHHHHHHHHhcCCCe
Confidence 00000000000000 000000111111111 122344556 99999999998876 4568888998888888
Q ss_pred EEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 144 ELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 144 ~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
++.+.++ +|..... ....++.+.+.+|+.+
T Consensus 489 kL~l~~g-~H~~~~~-----------~~~~d~~e~~~~Wfd~ 518 (767)
T PRK05371 489 KLFLHQG-GHVYPNN-----------WQSIDFRDTMNAWFTH 518 (767)
T ss_pred EEEEeCC-CccCCCc-----------hhHHHHHHHHHHHHHh
Confidence 8877765 5755431 2355677778888764
No 92
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.94 E-value=5e-09 Score=71.88 Aligned_cols=132 Identities=16% Similarity=0.165 Sum_probs=74.1
Q ss_pred cccccccccC-CCCce--EEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHH
Q 038786 2 RENNWLTEHV-DFQRV--FLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMV 78 (186)
Q Consensus 2 ~~l~~l~~~~-~~~~i--~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (186)
+.|..+.++. +.+++ +++|||-||.+++.++.++. .++-+|.+++-++....... .+.+...
T Consensus 90 dDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~-------d~~~viNcsGRydl~~~I~e--------Rlg~~~l 154 (269)
T KOG4667|consen 90 DDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYH-------DIRNVINCSGRYDLKNGINE--------RLGEDYL 154 (269)
T ss_pred HHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhc-------CchheEEcccccchhcchhh--------hhcccHH
Confidence 3444444444 44444 68999999999999999993 37777888887664321100 0000111
Q ss_pred HHHHHh-cC--CC-CCCC------------CCCCcCCCCCCCCCCCCCCCCCEEEEeeCccccccc--HHHHHHHHHHCC
Q 038786 79 DKFLSF-AL--PL-NSDK------------GHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDT--EMEYYEAMKKAG 140 (186)
Q Consensus 79 ~~~~~~-~~--~~-~~~~------------~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~ 140 (186)
.+..+. +. +. .... ....+.+.+ ..++ ..+ |+|-+||..|.++|. +.+|++.+.
T Consensus 155 ~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~ac---lkId-~~C-~VLTvhGs~D~IVPve~AkefAk~i~--- 226 (269)
T KOG4667|consen 155 ERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEAC---LKID-KQC-RVLTVHGSEDEIVPVEDAKEFAKIIP--- 226 (269)
T ss_pred HHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhh---cCcC-ccC-ceEEEeccCCceeechhHHHHHHhcc---
Confidence 111110 00 00 0000 001111111 1122 345 999999999988773 345554444
Q ss_pred CceEEEEeCCCCccccc
Q 038786 141 KDVELLVSPGMGHSFYL 157 (186)
Q Consensus 141 ~~~~~~~~~~~~H~~~~ 157 (186)
.++++++||+.|.|..
T Consensus 227 -nH~L~iIEgADHnyt~ 242 (269)
T KOG4667|consen 227 -NHKLEIIEGADHNYTG 242 (269)
T ss_pred -CCceEEecCCCcCccc
Confidence 4899999999999986
No 93
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.94 E-value=1.9e-08 Score=71.64 Aligned_cols=47 Identities=34% Similarity=0.481 Sum_probs=38.3
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
+..+.++.+..+++++|||+||.+++.++.++ |+.+++++++++...
T Consensus 78 ~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~------p~~~~~~v~~~~~~~ 124 (282)
T COG0596 78 LAALLDALGLEKVVLVGHSMGGAVALALALRH------PDRVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHHhCCCceEEEEecccHHHHHHHHHhc------chhhheeeEecCCCC
Confidence 34445566777799999999999999999988 668999999987643
No 94
>PRK04940 hypothetical protein; Provisional
Probab=98.92 E-value=2.6e-08 Score=67.41 Aligned_cols=119 Identities=18% Similarity=0.273 Sum_probs=74.4
Q ss_pred CceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCCCC
Q 038786 14 QRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKG 93 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (186)
+++.|+|+|+||.-|..++.++ .++ .|+++|.+.+............. +. .........
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~--------g~~-aVLiNPAv~P~~~L~~~ig~~~~-y~--~~~~~h~~e--------- 118 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC--------GIR-QVIFNPNLFPEENMEGKIDRPEE-YA--DIATKCVTN--------- 118 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH--------CCC-EEEECCCCChHHHHHHHhCCCcc-hh--hhhHHHHHH---------
Confidence 5799999999999999999998 454 47889987653211111110000 10 111111111
Q ss_pred CCCcCCCCCCCCCCCCCCCC-CEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHH
Q 038786 94 HPYTCPMGPAGPPIDGLKLP-PFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQT 172 (186)
Q Consensus 94 ~~~~~p~~~~~~~~~~~~~p-P~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~ 172 (186)
++ .+-| ..+++..+.|.++|. ++..+++... .+..+.+|++|.|.. .
T Consensus 119 -------------L~-~~~p~r~~vllq~gDEvLDy-r~a~~~y~~~---y~~~v~~GGdH~f~~--------------f 166 (180)
T PRK04940 119 -------------FR-EKNRDRCLVILSRNDEVLDS-QRTAEELHPY---YEIVWDEEQTHKFKN--------------I 166 (180)
T ss_pred -------------hh-hcCcccEEEEEeCCCcccCH-HHHHHHhccC---ceEEEECCCCCCCCC--------------H
Confidence 11 1111 468999999988753 4444455432 257889999999954 7
Q ss_pred HHHHHHHHHHhhh
Q 038786 173 CGLFQGIAEFMRK 185 (186)
Q Consensus 173 ~~~~~~i~~fl~~ 185 (186)
++.+..|.+|++.
T Consensus 167 e~~l~~I~~F~~~ 179 (180)
T PRK04940 167 SPHLQRIKAFKTL 179 (180)
T ss_pred HHHHHHHHHHHhc
Confidence 7889999999864
No 95
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.89 E-value=1.2e-09 Score=79.34 Aligned_cols=171 Identities=19% Similarity=0.184 Sum_probs=51.3
Q ss_pred cccccccccC----CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCccccc-----------
Q 038786 2 RENNWLTEHV----DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELE----------- 66 (186)
Q Consensus 2 ~~l~~l~~~~----~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~----------- 66 (186)
+.++||+... +.++|+|||||-|..-++.|+.+...... ...|+++|+-+|+.|..........
T Consensus 92 ~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~-~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A 170 (303)
T PF08538_consen 92 QLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPS-RPPVDGAILQAPVSDREAILNFLGEREAYEELVALA 170 (303)
T ss_dssp HHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT----CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHH
T ss_pred HHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCcccc-ccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHH
Confidence 3567777662 68899999999999999999998753211 3579999999999875432211110
Q ss_pred ------CCCCCCC-----------cHHHHHHHHHhcCCCCCCCCCCCcCCCC--CCCCCCCCCCCCCEEEEeeCcccccc
Q 038786 67 ------NPQSPLL-----------TLDMVDKFLSFALPLNSDKGHPYTCPMG--PAGPPIDGLKLPPFLLCVAGNDLIKD 127 (186)
Q Consensus 67 ------~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~pP~li~~g~~D~~~~ 127 (186)
...+..+ ++.....|....... ..++.+.+=+. .....+..+.. |+|++.+++|..+|
T Consensus 171 ~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~--gdDD~FSSDL~de~l~~tfG~v~~-plLvl~Sg~DEyvP 247 (303)
T PF08538_consen 171 KELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPG--GDDDYFSSDLSDERLKKTFGKVSK-PLLVLYSGKDEYVP 247 (303)
T ss_dssp HHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SS--HHHHTHHHHHTT-HHHHTGGG--S--EEEEEE--TT---
T ss_pred HHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCC--CcccccCCCCCHHHHHHHhccCCC-ceEEEecCCCceec
Confidence 0000000 000011111100000 00000000000 00112333445 99999999998887
Q ss_pred cH---HHHHHHHHHCCC----ceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 128 TE---MEYYEAMKKAGK----DVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 128 ~~---~~~~~~l~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
.. ..+.+++++.-. .....++||+.|....... .+..+.+.+.|..||+
T Consensus 248 ~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~--------~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 248 PWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQ--------AEAREWLVERVVKFLK 303 (303)
T ss_dssp ----------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccc--------ccccccccccccccCC
Confidence 54 445555554322 2345689999999976311 1234578889999985
No 96
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.87 E-value=1.5e-08 Score=86.15 Aligned_cols=69 Identities=14% Similarity=0.164 Sum_probs=50.8
Q ss_pred CCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEE-EEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 106 PIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVEL-LVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 106 ~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
.+..+++ |+|+++|++|.+++. +..+.+.+.....++ .++++++|....... ...++++..+.+||+
T Consensus 292 ~L~~i~~-P~L~i~G~~D~ivp~--~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~---------~a~~~~wp~i~~wl~ 359 (994)
T PRK07868 292 TLADITC-PVLAFVGEVDDIGQP--ASVRGIRRAAPNAEVYESLIRAGHFGLVVGS---------RAAQQTWPTVADWVK 359 (994)
T ss_pred chhhCCC-CEEEEEeCCCCCCCH--HHHHHHHHhCCCCeEEEEeCCCCCEeeeech---------hhhhhhChHHHHHHH
Confidence 3566677 999999999999653 334444444445666 677999999887543 567889999999998
Q ss_pred hC
Q 038786 185 KH 186 (186)
Q Consensus 185 ~~ 186 (186)
++
T Consensus 360 ~~ 361 (994)
T PRK07868 360 WL 361 (994)
T ss_pred Hh
Confidence 64
No 97
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.86 E-value=2.9e-08 Score=71.37 Aligned_cols=148 Identities=16% Similarity=0.151 Sum_probs=86.5
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccc---c-CCCCCCCcHHHH
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSEL---E-NPQSPLLTLDMV 78 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~---~-~~~~~~~~~~~~ 78 (186)
++.+|.++.+.+++.++||||||..++.++..+....- .+++..+|.|.+.++......... . ...++-......
T Consensus 92 vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~-~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~~~~~y 170 (255)
T PF06028_consen 92 VLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKN-LPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGPKSMTPMY 170 (255)
T ss_dssp HHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTT-S-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-BSS--HHH
T ss_pred HHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCC-CcccceEEEeccccCccccccccchhhhhcccCCcccCHHH
Confidence 56677778899999999999999999999998854322 237899999988776543221110 0 111122222333
Q ss_pred HHHHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeC------cccccccH--HHHHHHHHHCCCceEEEEeCC
Q 038786 79 DKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAG------NDLIKDTE--MEYYEAMKKAGKDVELLVSPG 150 (186)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~------~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~ 150 (186)
..+...+ ...+. ..+ .+|.+.|. .|-.|+.. ..+...++......+-.++.|
T Consensus 171 ~~l~~~~------------------~~~~p-~~i-~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G 230 (255)
T PF06028_consen 171 QDLLKNR------------------RKNFP-KNI-QVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTG 230 (255)
T ss_dssp HHHHHTH------------------GGGST-TT--EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEES
T ss_pred HHHHHHH------------------HhhCC-CCe-EEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEEC
Confidence 3333321 00111 123 68999998 67666642 333333344456677777765
Q ss_pred --CCccccccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 151 --MGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 151 --~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
+.|.-.+. ..++.+.|.+||-
T Consensus 231 ~~a~HS~Lhe-------------N~~V~~~I~~FLw 253 (255)
T PF06028_consen 231 KDAQHSQLHE-------------NPQVDKLIIQFLW 253 (255)
T ss_dssp GGGSCCGGGC-------------CHHHHHHHHHHHC
T ss_pred CCCccccCCC-------------CHHHHHHHHHHhc
Confidence 57877763 5678899999984
No 98
>PRK05855 short chain dehydrogenase; Validated
Probab=98.84 E-value=3.1e-09 Score=85.37 Aligned_cols=60 Identities=18% Similarity=0.200 Sum_probs=44.5
Q ss_pred CCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 110 LKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 110 ~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
+++ |+|+++|++|.+++. ...+.+.+.....++++++ ++|..+. +.++++.+.|.+|+.+
T Consensus 232 ~~~-P~lii~G~~D~~v~~--~~~~~~~~~~~~~~~~~~~-~gH~~~~------------e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 232 TDV-PVQLIVPTGDPYVRP--ALYDDLSRWVPRLWRREIK-AGHWLPM------------SHPQVLAAAVAEFVDA 291 (582)
T ss_pred ccC-ceEEEEeCCCcccCH--HHhccccccCCcceEEEcc-CCCcchh------------hChhHHHHHHHHHHHh
Confidence 456 999999999999763 3333444444456777776 5898877 6788999999999874
No 99
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.82 E-value=2e-07 Score=61.28 Aligned_cols=123 Identities=19% Similarity=0.212 Sum_probs=78.1
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEec-CCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPI-HPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNS 90 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (186)
.-.++++.|+||||-+++.++.... ..|.+++++ ||+...-.
T Consensus 87 ~~gpLi~GGkSmGGR~aSmvade~~------A~i~~L~clgYPfhppGK------------------------------- 129 (213)
T COG3571 87 AEGPLIIGGKSMGGRVASMVADELQ------APIDGLVCLGYPFHPPGK------------------------------- 129 (213)
T ss_pred cCCceeeccccccchHHHHHHHhhc------CCcceEEEecCccCCCCC-------------------------------
Confidence 4458999999999999999998763 247787765 45432110
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhH
Q 038786 91 DKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAA 170 (186)
Q Consensus 91 ~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 170 (186)
+.. . ...-+.+++. |+||++|+.|.+- .++.... -....+.+++.++++.|..-..+..+.+ ...+
T Consensus 130 Pe~-~-------Rt~HL~gl~t-Ptli~qGtrD~fG--tr~~Va~-y~ls~~iev~wl~~adHDLkp~k~vsgl--s~~~ 195 (213)
T COG3571 130 PEQ-L-------RTEHLTGLKT-PTLITQGTRDEFG--TRDEVAG-YALSDPIEVVWLEDADHDLKPRKLVSGL--STAD 195 (213)
T ss_pred ccc-c-------hhhhccCCCC-CeEEeeccccccc--CHHHHHh-hhcCCceEEEEeccCccccccccccccc--cHHH
Confidence 000 0 0122455666 9999999999984 3322211 1234578999999999998764332221 2234
Q ss_pred HHHHHHHHHHHHhhh
Q 038786 171 QTCGLFQGIAEFMRK 185 (186)
Q Consensus 171 ~~~~~~~~i~~fl~~ 185 (186)
.-....+.|..|...
T Consensus 196 hL~~~A~~va~~~~~ 210 (213)
T COG3571 196 HLKTLAEQVAGWARR 210 (213)
T ss_pred HHHHHHHHHHHHHhh
Confidence 556677788888754
No 100
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.78 E-value=5.9e-08 Score=73.61 Aligned_cols=151 Identities=16% Similarity=0.106 Sum_probs=80.9
Q ss_pred ccccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHH
Q 038786 3 ENNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDK 80 (186)
Q Consensus 3 ~l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (186)
.++||.+.. |.+||.++|.|+||++|..+|... +.+++++|.+.|..+.-......... -+ .....
T Consensus 248 VLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le------~~RlkavV~~Ga~vh~~ft~~~~~~~--~P----~my~d 315 (411)
T PF06500_consen 248 VLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE------DPRLKAVVALGAPVHHFFTDPEWQQR--VP----DMYLD 315 (411)
T ss_dssp HHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT------TTT-SEEEEES---SCGGH-HHHHTT--S-----HHHHH
T ss_pred HHHHHhcCCccChhheEEEEeccchHHHHHHHHhc------ccceeeEeeeCchHhhhhccHHHHhc--CC----HHHHH
Confidence 356665554 788999999999999999999765 56999999999986543221111111 11 11111
Q ss_pred HHHhcCCCCCCCC------CCCcCCCCCCCCCC--CCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCC
Q 038786 81 FLSFALPLNSDKG------HPYTCPMGPAGPPI--DGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMG 152 (186)
Q Consensus 81 ~~~~~~~~~~~~~------~~~~~p~~~~~~~~--~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 152 (186)
.+...++...... ....+-.. ...+ +...+ |+|.+.|++|++.| .+-.+.+...+.+-+...++...
T Consensus 316 ~LA~rlG~~~~~~~~l~~el~~~SLk~--qGlL~~rr~~~-plL~i~~~~D~v~P--~eD~~lia~~s~~gk~~~~~~~~ 390 (411)
T PF06500_consen 316 VLASRLGMAAVSDESLRGELNKFSLKT--QGLLSGRRCPT-PLLAINGEDDPVSP--IEDSRLIAESSTDGKALRIPSKP 390 (411)
T ss_dssp HHHHHCT-SCE-HHHHHHHGGGGSTTT--TTTTTSS-BSS--EEEEEETT-SSS---HHHHHHHHHTBTT-EEEEE-SSS
T ss_pred HHHHHhCCccCCHHHHHHHHHhcCcch--hccccCCCCCc-ceEEeecCCCCCCC--HHHHHHHHhcCCCCceeecCCCc
Confidence 1222222111110 01111111 1122 22223 99999999999965 45566677776667777777543
Q ss_pred ccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 153 HSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 153 H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
.+ ...++.+..+.+||++
T Consensus 391 ---~~------------~gy~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 391 ---LH------------MGYPQALDEIYKWLED 408 (411)
T ss_dssp ---HH------------HHHHHHHHHHHHHHHH
T ss_pred ---cc------------cchHHHHHHHHHHHHH
Confidence 11 3356788899999875
No 101
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.78 E-value=9.1e-09 Score=73.91 Aligned_cols=87 Identities=25% Similarity=0.327 Sum_probs=67.3
Q ss_pred CCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCC
Q 038786 11 VDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNS 90 (186)
Q Consensus 11 ~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (186)
.|.+||+++|.|+||..+..++.++ |+.+++.+++++--+.. +
T Consensus 266 ID~sRIYviGlSrG~~gt~al~~kf------PdfFAaa~~iaG~~d~v--------------------------~----- 308 (387)
T COG4099 266 IDRSRIYVIGLSRGGFGTWALAEKF------PDFFAAAVPIAGGGDRV--------------------------Y----- 308 (387)
T ss_pred cccceEEEEeecCcchhhHHHHHhC------chhhheeeeecCCCchh--------------------------h-----
Confidence 3889999999999999999999999 88999999999875420 0
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCccccccc--HHHHHHHHHHCCCceEEEEeC
Q 038786 91 DKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDT--EMEYYEAMKKAGKDVELLVSP 149 (186)
Q Consensus 91 ~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~ 149 (186)
.+++ ++ +. |++++|+++|.+.|. ++-..++|+....++++..|.
T Consensus 309 -----lv~~-------lk--~~-piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 309 -----LVRT-------LK--KA-PIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred -----hhhh-------hc--cC-ceEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 0111 21 13 999999999988773 577778888877777777665
No 102
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.78 E-value=2.1e-09 Score=73.44 Aligned_cols=121 Identities=18% Similarity=0.166 Sum_probs=75.5
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSD 91 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (186)
|+.++.|.||||||+-|+..+++. |.+.+++-.++|+.+......... -+..|++....
T Consensus 139 d~~k~~IfGHSMGGhGAl~~~Lkn------~~kykSvSAFAPI~NP~~cpWGqK---------------Af~gYLG~~ka 197 (283)
T KOG3101|consen 139 DPLKVGIFGHSMGGHGALTIYLKN------PSKYKSVSAFAPICNPINCPWGQK---------------AFTGYLGDNKA 197 (283)
T ss_pred cchhcceeccccCCCceEEEEEcC------cccccceeccccccCcccCcchHH---------------HhhcccCCChH
Confidence 778999999999999999999987 668999999999887644222111 12224433221
Q ss_pred CCCCC-cCCCCCCCCCCCCCCCCCEEEEeeCcccccccH---HHHHHHHHH-CCCceEEEEeCCCCccccc
Q 038786 92 KGHPY-TCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTE---MEYYEAMKK-AGKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 92 ~~~~~-~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~---~~~~~~l~~-~~~~~~~~~~~~~~H~~~~ 157 (186)
.-..+ ..-+ ...++.... -+||-+|..|.++... ..+..+... ...++.++..+|-.|.+.+
T Consensus 198 ~W~~yDat~l---ik~y~~~~~-~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYyf 264 (283)
T KOG3101|consen 198 QWEAYDATHL---IKNYRGVGD-DILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYYF 264 (283)
T ss_pred HHhhcchHHH---HHhcCCCCc-cEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCcceee
Confidence 11110 1000 112333333 6899999999877532 233333332 2257888889999999987
No 103
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.73 E-value=1.2e-07 Score=68.57 Aligned_cols=109 Identities=18% Similarity=0.144 Sum_probs=74.7
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSD 91 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (186)
+.++-+|+|.|+||.+++..++.+ |+.+..++..||.++........ +.
T Consensus 175 ~a~~r~L~G~SlGG~vsL~agl~~------Pe~FG~V~s~Sps~~~~~~~~~~-~~------------------------ 223 (299)
T COG2382 175 DADGRVLAGDSLGGLVSLYAGLRH------PERFGHVLSQSGSFWWTPLDTQP-QG------------------------ 223 (299)
T ss_pred cCCCcEEeccccccHHHHHHHhcC------chhhceeeccCCccccCcccccc-cc------------------------
Confidence 566789999999999999999988 88999999999987654311110 00
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccc
Q 038786 92 KGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 92 ~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 157 (186)
.....++.... +.. ...=++...++.+.+++.++++++.|++.+.++.+.+|+| +|.+..
T Consensus 224 ~~~~~l~~~~a----~~~-~~~~~l~~g~~~~~~~~pNr~L~~~L~~~g~~~~yre~~G-gHdw~~ 283 (299)
T COG2382 224 EVAESLKILHA----IGT-DERIVLTTGGEEGDFLRPNRALAAQLEKKGIPYYYREYPG-GHDWAW 283 (299)
T ss_pred chhhhhhhhhc----cCc-cceEEeecCCccccccchhHHHHHHHHhcCCcceeeecCC-CCchhH
Confidence 00000111111 110 0112344455556778889999999999999999999998 898865
No 104
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.73 E-value=4.4e-09 Score=75.88 Aligned_cols=38 Identities=24% Similarity=0.221 Sum_probs=34.4
Q ss_pred ceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCC
Q 038786 15 RVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQ 58 (186)
Q Consensus 15 ~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~ 58 (186)
+.+|+|+||||..|+.++.++ |+.+.+++.+||.++..
T Consensus 116 ~~~i~G~S~GG~~Al~~~l~~------Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 116 RRAIAGHSMGGYGALYLALRH------PDLFGAVIAFSGALDPS 153 (251)
T ss_dssp CEEEEEETHHHHHHHHHHHHS------TTTESEEEEESEESETT
T ss_pred eeEEeccCCCcHHHHHHHHhC------ccccccccccCcccccc
Confidence 389999999999999999999 88999999999986654
No 105
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.72 E-value=3.3e-08 Score=71.36 Aligned_cols=151 Identities=19% Similarity=0.179 Sum_probs=91.6
Q ss_pred cccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCC-----CC------
Q 038786 2 RENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENP-----QS------ 70 (186)
Q Consensus 2 ~~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~-----~~------ 70 (186)
+.+..+.++.+.+.++-+|--+||+|-+.+|.++ |+++.|+||++|............... ..
T Consensus 87 e~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~------p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~ 160 (283)
T PF03096_consen 87 EMLPEVLDHFGLKSVIGFGVGAGANILARFALKH------PERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSS 160 (283)
T ss_dssp CTHHHHHHHHT---EEEEEETHHHHHHHHHHHHS------GGGEEEEEEES---S---HHHHHHHHHH-------CTTS-
T ss_pred HHHHHHHHhCCccEEEEEeeccchhhhhhccccC------ccceeEEEEEecCCCCccHHHHHHHHHhcccccccccccc
Confidence 4455666777899999999999999999999999 789999999998765332211111000 00
Q ss_pred ------------------------------CCCcHHHHHHHHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEee
Q 038786 71 ------------------------------PLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVA 120 (186)
Q Consensus 71 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g 120 (186)
.......+..|++.|..+..- ....+...+ |+|+++|
T Consensus 161 ~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL------------~~~~~~~~c-~vLlvvG 227 (283)
T PF03096_consen 161 VKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDL------------SIERPSLGC-PVLLVVG 227 (283)
T ss_dssp HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----------------SECTTCCS--EEEEEE
T ss_pred hHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccc------------hhhcCCCCC-CeEEEEe
Confidence 001122333333333221111 111222335 9999999
Q ss_pred CcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 121 GNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 121 ~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
+.-+..++..++..+|.. ..+++...++++=.... +++..+.+.+.=|++.
T Consensus 228 ~~Sp~~~~vv~~ns~Ldp--~~ttllkv~dcGglV~e------------EqP~klaea~~lFlQG 278 (283)
T PF03096_consen 228 DNSPHVDDVVEMNSKLDP--TKTTLLKVADCGGLVLE------------EQPGKLAEAFKLFLQG 278 (283)
T ss_dssp TTSTTHHHHHHHHHHS-C--CCEEEEEETT-TT-HHH------------H-HHHHHHHHHHHHHH
T ss_pred cCCcchhhHHHHHhhcCc--ccceEEEecccCCcccc------------cCcHHHHHHHHHHHcc
Confidence 999998888888888864 36899999999877766 8899999999999874
No 106
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.71 E-value=2.7e-08 Score=72.72 Aligned_cols=70 Identities=20% Similarity=0.222 Sum_probs=45.7
Q ss_pred CCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHH-CCCceEEEEeCCCCccccccccccCCCcchhHHH-HHHHHHHHH
Q 038786 104 GPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKK-AGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQT-CGLFQGIAE 181 (186)
Q Consensus 104 ~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ 181 (186)
.+.+.++++ |+||+++.+|++++.. . .-.... ..+.+.+.+-+-+||.-...... ..+ .-+.+.+.+
T Consensus 267 ~~~L~~Ir~-PtLii~A~DDP~~~~~-~-iP~~~~~~np~v~l~~t~~GGHvGfl~~~~--------~~~~~W~~~ri~~ 335 (345)
T COG0429 267 LPLLPKIRK-PTLIINAKDDPFMPPE-V-IPKLQEMLNPNVLLQLTEHGGHVGFLGGKL--------LHPQMWLEQRILD 335 (345)
T ss_pred ccccccccc-ceEEEecCCCCCCChh-h-CCcchhcCCCceEEEeecCCceEEeccCcc--------ccchhhHHHHHHH
Confidence 345677777 9999999999998641 1 111122 57789999999999987764311 111 245556777
Q ss_pred Hhh
Q 038786 182 FMR 184 (186)
Q Consensus 182 fl~ 184 (186)
|++
T Consensus 336 ~l~ 338 (345)
T COG0429 336 WLD 338 (345)
T ss_pred HHH
Confidence 765
No 107
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.71 E-value=6.5e-08 Score=68.09 Aligned_cols=39 Identities=26% Similarity=0.268 Sum_probs=35.9
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
|++||++.|+|+||.++..++..+ |+.|.++..+++...
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~------pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAY------PDLFAAVAVVSGVPY 133 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhC------CccceEEEeeccccc
Confidence 999999999999999999999988 889999999988754
No 108
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.70 E-value=2e-07 Score=73.38 Aligned_cols=56 Identities=11% Similarity=0.089 Sum_probs=41.2
Q ss_pred cccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCC-ceeEEEecCCCCCCCC
Q 038786 2 RENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPL-RVAGAIPIHPGFLRQE 59 (186)
Q Consensus 2 ~~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~-~~~~~vl~~p~~~~~~ 59 (186)
+|++.+.+..+.++|.++|+||||.+++.++..+... .++ +|++++++...+|...
T Consensus 276 ~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~--~~~~~V~sltllatplDf~~ 332 (560)
T TIGR01839 276 EAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQAL--GQLRKVNSLTYLVSLLDSTM 332 (560)
T ss_pred HHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhc--CCCCceeeEEeeecccccCC
Confidence 3566777777899999999999999999743222211 143 7999999888888654
No 109
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.68 E-value=1.1e-07 Score=64.54 Aligned_cols=104 Identities=22% Similarity=0.232 Sum_probs=60.2
Q ss_pred CceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCCCC
Q 038786 14 QRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKG 93 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (186)
+.++++|||.|+..++.++... ...+++|++|++|+..... ...... .
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~~~-----~~~~v~g~lLVAp~~~~~~---~~~~~~----------------~-------- 102 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLAEQ-----SQKKVAGALLVAPFDPDDP---EPFPPE----------------L-------- 102 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHHHT-----CCSSEEEEEEES--SCGCH---HCCTCG----------------G--------
T ss_pred CCeEEEEeCHHHHHHHHHHhhc-----ccccccEEEEEcCCCcccc---cchhhh----------------c--------
Confidence 4599999999999999999622 1558999999999843100 000000 0
Q ss_pred CCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccc
Q 038786 94 HPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDK 159 (186)
Q Consensus 94 ~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 159 (186)
.. ..+. ......+ |.+++.+++|+.++. +.++.+.+. ...++.++++++|.-....
T Consensus 103 ~~-f~~~-----p~~~l~~-~~~viaS~nDp~vp~--~~a~~~A~~-l~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 103 DG-FTPL-----PRDPLPF-PSIVIASDNDPYVPF--ERAQRLAQR-LGAELIILGGGGHFNAASG 158 (171)
T ss_dssp CC-CTTS-----HCCHHHC-CEEEEEETTBSSS-H--HHHHHHHHH-HT-EEEEETS-TTSSGGGT
T ss_pred cc-cccC-----cccccCC-CeEEEEcCCCCccCH--HHHHHHHHH-cCCCeEECCCCCCcccccC
Confidence 00 0000 0111224 779999999999763 333344331 1368999999999876643
No 110
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.66 E-value=9.6e-08 Score=75.41 Aligned_cols=129 Identities=19% Similarity=0.196 Sum_probs=84.6
Q ss_pred cccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcc--c------ccCCCCCCC
Q 038786 4 NNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKS--E------LENPQSPLL 73 (186)
Q Consensus 4 l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~--~------~~~~~~~~~ 73 (186)
.++|.++. +.++|+++|-|+||.|..+++... |+.++++|+-.|+.|.-..+.. . ...+.++.
T Consensus 515 a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~------P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~- 587 (682)
T COG1770 515 ARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMA------PDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPL- 587 (682)
T ss_pred HHHHHHcCcCCccceEEeccCchhHHHHHHHhhC------hhhhhheeecCCccchhhhhcCCCCCCCccchhhhCCcC-
Confidence 44555554 788999999999999999999877 8899999999999885332111 1 01112222
Q ss_pred cHHHHHHHHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccc--cHHHHHHHHHHCCC---ceEEEEe
Q 038786 74 TLDMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKD--TEMEYYEAMKKAGK---DVELLVS 148 (186)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~---~~~~~~~ 148 (186)
......+++.| +|+. ++.....||+|+++|..|+-+. ++.+...+|.+.+. ++-++.=
T Consensus 588 -d~e~y~yikSY------------SPYd----NV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~ 650 (682)
T COG1770 588 -DPEYYDYIKSY------------SPYD----NVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTN 650 (682)
T ss_pred -CHHHHHHHhhc------------Cchh----ccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEec
Confidence 12222333433 3432 3444567899999999997765 57788888887643 3444443
Q ss_pred CCCCcccc
Q 038786 149 PGMGHSFY 156 (186)
Q Consensus 149 ~~~~H~~~ 156 (186)
=++||+=.
T Consensus 651 M~aGHgG~ 658 (682)
T COG1770 651 MDAGHGGA 658 (682)
T ss_pred ccccCCCC
Confidence 56888544
No 111
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.65 E-value=1.5e-07 Score=71.11 Aligned_cols=147 Identities=20% Similarity=0.191 Sum_probs=82.7
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCC----------
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPL---------- 72 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~---------- 72 (186)
+++++++.....+++.+|.||||+|...+..+.++. .+.+.|+.+.+||-.... ...........+
T Consensus 187 ~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~---~~l~~a~~v~~Pwd~~~~-~~~~~~~~~~~~y~~~l~~~l~ 262 (409)
T KOG1838|consen 187 VVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDN---TPLIAAVAVCNPWDLLAA-SRSIETPLYRRFYNRALTLNLK 262 (409)
T ss_pred HHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCC---CCceeEEEEeccchhhhh-hhHHhcccchHHHHHHHHHhHH
Confidence 456666666566899999999999999999887543 345677777788742200 000000000000
Q ss_pred --------------------CcHHHHHHHHHhcCCC-----CCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccc
Q 038786 73 --------------------LTLDMVDKFLSFALPL-----NSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKD 127 (186)
Q Consensus 73 --------------------~~~~~~~~~~~~~~~~-----~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~ 127 (186)
.....++.|-+.+... .........++ ...+..+++ |+|++++.+|++++
T Consensus 263 ~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs----~~~v~~I~V-P~L~ina~DDPv~p 337 (409)
T KOG1838|consen 263 RIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASS----SNYVDKIKV-PLLCINAADDPVVP 337 (409)
T ss_pred HHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcch----hhhcccccc-cEEEEecCCCCCCC
Confidence 0001111122211110 01111122222 345666777 99999999999987
Q ss_pred cHHHHHHHHHHCCCceEEEEeCCCCccccccc
Q 038786 128 TEMEYYEAMKKAGKDVELLVSPGMGHSFYLDK 159 (186)
Q Consensus 128 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 159 (186)
.. .+-......++.+-+.+-.-+||.-....
T Consensus 338 ~~-~ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 338 EE-AIPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred cc-cCCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 53 22223334456788888888889877654
No 112
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.59 E-value=1.7e-06 Score=62.03 Aligned_cols=112 Identities=24% Similarity=0.344 Sum_probs=68.1
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSD 91 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (186)
|.+++.|+|||.||-+|..+++...+... ..++++++++.|+-....... ..+
T Consensus 89 D~s~l~l~GHSrGGk~Af~~al~~~~~~~-~~~~~ali~lDPVdG~~~~~~--------------------------~~P 141 (259)
T PF12740_consen 89 DFSKLALAGHSRGGKVAFAMALGNASSSL-DLRFSALILLDPVDGMSKGSQ--------------------------TEP 141 (259)
T ss_pred cccceEEeeeCCCCHHHHHHHhhhccccc-ccceeEEEEeccccccccccC--------------------------CCC
Confidence 78899999999999999999988743222 347999999999853221100 000
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCEEEEeeCccc---------ccccHHHHHHHHHHCCCceEEEEeCCCCcccccc
Q 038786 92 KGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDL---------IKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLD 158 (186)
Q Consensus 92 ~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~---------~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 158 (186)
..-.+ .| ..+. ..+ |++++-.+... -.|....+.+-..+...+.-..+..+.+|.=..+
T Consensus 142 ~v~~~-~p-----~s~~-~~~-P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LD 209 (259)
T PF12740_consen 142 PVLTY-TP-----QSFD-FSM-PALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLD 209 (259)
T ss_pred ccccC-cc-----cccC-CCC-CeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhc
Confidence 00000 01 0111 235 88888666663 2234444455555666667777778899976653
No 113
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.53 E-value=3.8e-08 Score=76.81 Aligned_cols=131 Identities=16% Similarity=0.106 Sum_probs=88.0
Q ss_pred ccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHH
Q 038786 5 NWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFL 82 (186)
Q Consensus 5 ~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (186)
++|.++. .++++.+.|-|-||.|+...+.++ |+.+.+++.-.|.+|+.....-. .+ ..++.
T Consensus 489 edLi~rgitspe~lgi~GgSNGGLLvg~alTQr------PelfgA~v~evPllDMlRYh~l~----aG----~sW~~--- 551 (648)
T COG1505 489 EDLIKRGITSPEKLGIQGGSNGGLLVGAALTQR------PELFGAAVCEVPLLDMLRYHLLT----AG----SSWIA--- 551 (648)
T ss_pred HHHHHhCCCCHHHhhhccCCCCceEEEeeeccC------hhhhCceeeccchhhhhhhcccc----cc----hhhHh---
Confidence 4444443 889999999999999998888776 88999999999999875421110 00 00110
Q ss_pred HhcCCCCC-CCC---CCCcCCCCCCCCCCCCCCCCCEEEEeeCcc-cccc-cHHHHHHHHHHCCCceEEEEeCCCCcccc
Q 038786 83 SFALPLNS-DKG---HPYTCPMGPAGPPIDGLKLPPFLLCVAGND-LIKD-TEMEYYEAMKKAGKDVELLVSPGMGHSFY 156 (186)
Q Consensus 83 ~~~~~~~~-~~~---~~~~~p~~~~~~~~~~~~~pP~li~~g~~D-~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 156 (186)
-| +... +.. -...+|+... -.+.+.||+||.++..| .+.| .++.|+.+|++.+.++-+.+--+++|+-.
T Consensus 552 -EY-G~Pd~P~d~~~l~~YSPy~nl---~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~ 626 (648)
T COG1505 552 -EY-GNPDDPEDRAFLLAYSPYHNL---KPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGA 626 (648)
T ss_pred -hc-CCCCCHHHHHHHHhcCchhcC---CccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCC
Confidence 01 1111 110 0123454432 22356899999999988 5555 57999999999998888888778999886
Q ss_pred c
Q 038786 157 L 157 (186)
Q Consensus 157 ~ 157 (186)
-
T Consensus 627 ~ 627 (648)
T COG1505 627 A 627 (648)
T ss_pred C
Confidence 5
No 114
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.49 E-value=1e-07 Score=67.78 Aligned_cols=128 Identities=16% Similarity=0.135 Sum_probs=75.3
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSD 91 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (186)
|.+||.+.|.|.||.|++.++.-. ++++++++.+|.+.--.+.... ...+++ ..+..|++..-+.
T Consensus 174 de~Ri~v~G~SqGGglalaaaal~-------~rik~~~~~~Pfl~df~r~i~~--~~~~~y---dei~~y~k~h~~~--- 238 (321)
T COG3458 174 DEERIGVTGGSQGGGLALAAAALD-------PRIKAVVADYPFLSDFPRAIEL--ATEGPY---DEIQTYFKRHDPK--- 238 (321)
T ss_pred chhheEEeccccCchhhhhhhhcC-------hhhhcccccccccccchhheee--cccCcH---HHHHHHHHhcCch---
Confidence 889999999999999999998744 3899999999987532221111 112222 2222333322111
Q ss_pred CCCCCcC--CCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccc
Q 038786 92 KGHPYTC--PMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 92 ~~~~~~~--p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 157 (186)
+..... -+++..+.-..++. |+|+..|-.|.+++.+..|+..-.-.. ..++.+|+--.|.-..
T Consensus 239 -e~~v~~TL~yfD~~n~A~RiK~-pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy~~~aHe~~p 303 (321)
T COG3458 239 -EAEVFETLSYFDIVNLAARIKV-PVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIYPYFAHEGGP 303 (321)
T ss_pred -HHHHHHHHhhhhhhhHHHhhcc-ceEEeecccCCCCCChhhHHHhhcccC-CceEEEeeccccccCc
Confidence 000000 01111111122445 999999999999998887765443322 4577777766676543
No 115
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.49 E-value=1e-06 Score=60.99 Aligned_cols=111 Identities=24% Similarity=0.210 Sum_probs=67.9
Q ss_pred EEeecChhHHHHHHHHHHh--ccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCCCCC
Q 038786 17 FLIGDSSGGNVVHEVAARA--GQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGH 94 (186)
Q Consensus 17 ~l~G~S~GG~la~~~a~~~--~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (186)
.|+|+|.|+.++..++... +......+.++=+|++++....... +...+
T Consensus 107 GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~--------------------~~~~~--------- 157 (230)
T KOG2551|consen 107 GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK--------------------LDESA--------- 157 (230)
T ss_pred cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch--------------------hhhhh---------
Confidence 6899999999999999822 2111222357888999987532100 00000
Q ss_pred CCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHH
Q 038786 95 PYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCG 174 (186)
Q Consensus 95 ~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~ 174 (186)
. ...+++ |.|-+.|+.|.+++.. ..+.|.+.-.+..+..-| ++|..+. ...
T Consensus 158 -~----------~~~i~~-PSLHi~G~~D~iv~~~--~s~~L~~~~~~a~vl~Hp-ggH~VP~--------------~~~ 208 (230)
T KOG2551|consen 158 -Y----------KRPLST-PSLHIFGETDTIVPSE--RSEQLAESFKDATVLEHP-GGHIVPN--------------KAK 208 (230)
T ss_pred -h----------ccCCCC-CeeEEecccceeecch--HHHHHHHhcCCCeEEecC-CCccCCC--------------chH
Confidence 0 122446 9999999999997653 233333333333444445 5798855 556
Q ss_pred HHHHHHHHhhh
Q 038786 175 LFQGIAEFMRK 185 (186)
Q Consensus 175 ~~~~i~~fl~~ 185 (186)
..+.|++||..
T Consensus 209 ~~~~i~~fi~~ 219 (230)
T KOG2551|consen 209 YKEKIADFIQS 219 (230)
T ss_pred HHHHHHHHHHH
Confidence 77788888753
No 116
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.47 E-value=1.1e-06 Score=61.97 Aligned_cols=98 Identities=14% Similarity=0.054 Sum_probs=53.5
Q ss_pred ceEEeecChhHHHHHHHHHHhccCCC--CCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCCC
Q 038786 15 RVFLIGDSSGGNVVHEVAARAGQADV--SPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDK 92 (186)
Q Consensus 15 ~i~l~G~S~GG~la~~~a~~~~~~~~--~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (186)
=..|+|+|.||.+|+.++........ ....++.+|+++++...... +
T Consensus 103 fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------------------~------- 151 (212)
T PF03959_consen 103 FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------------------Y------- 151 (212)
T ss_dssp -SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------------------------G-------
T ss_pred eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------------------------h-------
Confidence 46899999999999999976543211 23468999999987542111 0
Q ss_pred CCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccc--cHHHHHHHHHHCCCceEEEEeCCCCccccc
Q 038786 93 GHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKD--TEMEYYEAMKKAGKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 93 ~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 157 (186)
.... .. ..+++ |+|.++|++|.+++ .+..+++..... .++...++ +|.++.
T Consensus 152 -----~~~~-~~---~~i~i-PtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~~h~g-GH~vP~ 204 (212)
T PF03959_consen 152 -----QELY-DE---PKISI-PTLHVIGENDPVVPPERSEALAEMFDPD---ARVIEHDG-GHHVPR 204 (212)
T ss_dssp -----TTTT------TT----EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEEEESS-SSS---
T ss_pred -----hhhh-cc---ccCCC-CeEEEEeCCCCCcchHHHHHHHHhccCC---cEEEEECC-CCcCcC
Confidence 0000 01 11345 99999999999987 456666666553 56666665 677755
No 117
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.41 E-value=5.8e-08 Score=64.34 Aligned_cols=120 Identities=12% Similarity=0.102 Sum_probs=81.3
Q ss_pred cccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhc
Q 038786 6 WLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFA 85 (186)
Q Consensus 6 ~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (186)
|+.++.=+-...+.|.||||..|+.+..++ |..+.++|.+|++++..+-. ..|
T Consensus 93 Yv~eEalpgs~~~sgcsmGayhA~nfvfrh------P~lftkvialSGvYdardff---------------------g~y 145 (227)
T COG4947 93 YVIEEALPGSTIVSGCSMGAYHAANFVFRH------PHLFTKVIALSGVYDARDFF---------------------GGY 145 (227)
T ss_pred HHHHhhcCCCccccccchhhhhhhhhheeC------hhHhhhheeecceeeHHHhc---------------------ccc
Confidence 444444344578899999999999999998 77899999999998764321 112
Q ss_pred CCCCCCCCC------CCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccc
Q 038786 86 LPLNSDKGH------PYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 86 ~~~~~~~~~------~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 157 (186)
+..+..-.. ....|.. -+.++. . .+.+++|..|+.++..+.+.+.|.+...+..+.++.+..|.+..
T Consensus 146 yddDv~ynsP~dylpg~~dp~~--l~rlr~--~-~~vfc~G~e~~~L~~~~~L~~~l~dKqipaw~~~WggvaHdw~w 218 (227)
T COG4947 146 YDDDVYYNSPSDYLPGLADPFR--LERLRR--I-DMVFCIGDEDPFLDNNQHLSRLLSDKQIPAWMHVWGGVAHDWGW 218 (227)
T ss_pred ccCceeecChhhhccCCcChHH--HHHHhh--c-cEEEEecCccccccchHHHHHHhccccccHHHHHhcccccccHH
Confidence 111110000 0111111 111222 2 67889999999999999999999888888888888888887743
No 118
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.40 E-value=2.6e-07 Score=67.08 Aligned_cols=49 Identities=18% Similarity=0.227 Sum_probs=39.9
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCC
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQ 58 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~ 58 (186)
+++|+.+. +.++++|+||||||.+++.++.++ |..++++|+++|+....
T Consensus 89 ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~------p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 89 AYRWLIEQ-GHPPVTLWGLRLGALLALDAANPL------AAKCNRLVLWQPVVSGK 137 (266)
T ss_pred HHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhC------ccccceEEEeccccchH
Confidence 34566544 578999999999999999999877 66899999999987643
No 119
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.39 E-value=1.6e-06 Score=62.50 Aligned_cols=155 Identities=18% Similarity=0.113 Sum_probs=99.4
Q ss_pred cccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCC-----CCC----
Q 038786 2 RENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQ-----SPL---- 72 (186)
Q Consensus 2 ~~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~-----~~~---- 72 (186)
+-+--++++.+.+-|+-+|--+|++|-+.+|+.+ |+++-|+||+++-.....+......... ..-
T Consensus 110 d~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~h------p~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~Gmt~~ 183 (326)
T KOG2931|consen 110 DMLPEVLDHFGLKSVIGMGVGAGAYILARFALNH------PERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYGMTQG 183 (326)
T ss_pred HHHHHHHHhcCcceEEEecccccHHHHHHHHhcC------hhheeEEEEEecCCCCchHHHHHHHHHHHHHHHhhchhhh
Confidence 3344566777899999999999999999999999 7899999999886543322211111000 000
Q ss_pred --------------------------------CcHHHHHHHHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEee
Q 038786 73 --------------------------------LTLDMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVA 120 (186)
Q Consensus 73 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g 120 (186)
.....+..|+..|..+..-.. ..+ ......++ |+|++.|
T Consensus 184 ~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~---~r~-----~~~~tlkc-~vllvvG 254 (326)
T KOG2931|consen 184 VKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSI---ERP-----KLGTTLKC-PVLLVVG 254 (326)
T ss_pred HHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccc---cCC-----CcCccccc-cEEEEec
Confidence 111222233333321111100 000 00113446 9999999
Q ss_pred CcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 121 GNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 121 ~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
..-+.++...+...+|... .+.+..+.+++-.... +++..+.+.+.=|++.
T Consensus 255 d~Sp~~~~vv~~n~~Ldp~--~ttllk~~d~g~l~~e------------~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 255 DNSPHVSAVVECNSKLDPT--YTTLLKMADCGGLVQE------------EQPGKLAEAFKYFLQG 305 (326)
T ss_pred CCCchhhhhhhhhcccCcc--cceEEEEcccCCcccc------------cCchHHHHHHHHHHcc
Confidence 9999988888888777654 5788889999877766 6788888888888763
No 120
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.39 E-value=3e-07 Score=65.74 Aligned_cols=34 Identities=18% Similarity=0.176 Sum_probs=28.1
Q ss_pred CceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 141 KDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 141 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
.+.++.+++.++|..+. +-+.++...+..|..+|
T Consensus 294 Gk~Q~~vL~~~GH~v~E------------D~P~kva~~~~~f~~Rn 327 (343)
T KOG2564|consen 294 GKFQLQVLPLCGHFVHE------------DSPHKVAECLCVFWIRN 327 (343)
T ss_pred cceeeeeecccCceecc------------CCcchHHHHHHHHHhhh
Confidence 36899999999999987 45788888888888654
No 121
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.28 E-value=4.7e-07 Score=66.33 Aligned_cols=48 Identities=21% Similarity=0.288 Sum_probs=38.7
Q ss_pred cccccccc--CCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 3 ENNWLTEH--VDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 3 ~l~~l~~~--~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
.+++|.+. .+.++++|+||||||++|..++.+. +.++++++++.|...
T Consensus 99 ~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~------~~~v~~iv~LDPa~p 148 (275)
T cd00707 99 FLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRL------NGKLGRITGLDPAGP 148 (275)
T ss_pred HHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHh------cCccceeEEecCCcc
Confidence 34555554 3668999999999999999999887 558999999988753
No 122
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.27 E-value=2.1e-05 Score=60.34 Aligned_cols=70 Identities=16% Similarity=0.169 Sum_probs=48.3
Q ss_pred CCCCC-CCCEEEEeeCcccccccHHHHH-HHHH-HC-CCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHH
Q 038786 107 IDGLK-LPPFLLCVAGNDLIKDTEMEYY-EAMK-KA-GKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEF 182 (186)
Q Consensus 107 ~~~~~-~pP~li~~g~~D~~~~~~~~~~-~~l~-~~-~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~f 182 (186)
+..++ + |+|.+.|++|.+++.....+ ..|. .. ..+.+.+..+++||.-.+... ...+++.-.|.+|
T Consensus 333 l~~I~~~-pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~---------r~~~~i~P~i~~w 402 (406)
T TIGR01849 333 PGAITRV-ALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGS---------RFREEIYPLVREF 402 (406)
T ss_pred HHHCccc-ceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeCh---------hhhhhhchHHHHH
Confidence 44556 5 99999999999987543322 2221 11 224567777789998777533 5688999999999
Q ss_pred hhhC
Q 038786 183 MRKH 186 (186)
Q Consensus 183 l~~~ 186 (186)
|.++
T Consensus 403 l~~~ 406 (406)
T TIGR01849 403 IRRN 406 (406)
T ss_pred HHhC
Confidence 9865
No 123
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.27 E-value=4.7e-06 Score=65.90 Aligned_cols=135 Identities=16% Similarity=0.220 Sum_probs=84.7
Q ss_pred cccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcc--cc--cCCCCCCCcHHH
Q 038786 4 NNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKS--EL--ENPQSPLLTLDM 77 (186)
Q Consensus 4 l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~--~~--~~~~~~~~~~~~ 77 (186)
.+||.++. .++++.+.|.|+||.++.+++.+. |+.++++++-.|++|......- .. ...-+.+-..+.
T Consensus 537 AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~r------PdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g~p~~ 610 (712)
T KOG2237|consen 537 AEYLVENGYTQPSKLAIEGGSAGGLLVGACINQR------PDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWGNPED 610 (712)
T ss_pred HHHHHHcCCCCccceeEecccCccchhHHHhccC------chHhhhhhhcCcceehhhhhccCccccchhhhcccCChhh
Confidence 45676766 889999999999999999999877 8899999999999986432110 00 000001111111
Q ss_pred HHHHHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcc-cccc-cHHHHHHHHHHCC-------CceEEEEe
Q 038786 78 VDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGND-LIKD-TEMEYYEAMKKAG-------KDVELLVS 148 (186)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D-~~~~-~~~~~~~~l~~~~-------~~~~~~~~ 148 (186)
..++. .++|+........+...|-+|+.++.+| .+.+ .+..+..+|+..- .++-+.+.
T Consensus 611 ~~~~~-------------~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~ 677 (712)
T KOG2237|consen 611 FEDLI-------------KISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIE 677 (712)
T ss_pred hhhhh-------------eecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEe
Confidence 11111 2223222112222334778999999997 3333 5677777776531 35788899
Q ss_pred CCCCccccc
Q 038786 149 PGMGHSFYL 157 (186)
Q Consensus 149 ~~~~H~~~~ 157 (186)
.+++|+.-.
T Consensus 678 ~~agH~~~~ 686 (712)
T KOG2237|consen 678 TKAGHGAEK 686 (712)
T ss_pred cCCccccCC
Confidence 999998865
No 124
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.24 E-value=2e-07 Score=69.77 Aligned_cols=46 Identities=24% Similarity=0.161 Sum_probs=33.1
Q ss_pred cccccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCC
Q 038786 2 RENNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPG 54 (186)
Q Consensus 2 ~~l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~ 54 (186)
++++||.... |++||.++|+||||..+..+++-. ++|++.+..+=+
T Consensus 212 r~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-------dRIka~v~~~~l 259 (390)
T PF12715_consen 212 RALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-------DRIKATVANGYL 259 (390)
T ss_dssp HHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--------TT--EEEEES-B
T ss_pred HHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-------hhhHhHhhhhhh
Confidence 3567775554 999999999999999999998865 489887765544
No 125
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.22 E-value=3.5e-06 Score=64.41 Aligned_cols=98 Identities=17% Similarity=0.250 Sum_probs=54.0
Q ss_pred ccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcC
Q 038786 7 LTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFAL 86 (186)
Q Consensus 7 l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (186)
++.++|.++|.++|||.||.-++..+.+. .++++.|++-||+..... + .
T Consensus 221 ~~grlD~~~i~~~GHSFGGATa~~~l~~d-------~r~~~~I~LD~W~~Pl~~-----~------------------~- 269 (379)
T PF03403_consen 221 FKGRLDLSRIGLAGHSFGGATALQALRQD-------TRFKAGILLDPWMFPLGD-----E------------------I- 269 (379)
T ss_dssp GTT-EEEEEEEEEEETHHHHHHHHHHHH--------TT--EEEEES---TTS-G-----G------------------G-
T ss_pred HhhhcchhheeeeecCchHHHHHHHHhhc-------cCcceEEEeCCcccCCCc-----c------------------c-
Confidence 44566889999999999999999887766 379999999998642110 0 0
Q ss_pred CCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccc
Q 038786 87 PLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 87 ~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 157 (186)
...++. |+|+++++. ..........+++........+..+.|..|.-..
T Consensus 270 --------------------~~~i~~-P~L~InSe~-f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~s 318 (379)
T PF03403_consen 270 --------------------YSKIPQ-PLLFINSES-FQWWENIFRMKKVISNNKESRMLTIKGTAHLSFS 318 (379)
T ss_dssp --------------------GGG--S--EEEEEETT-T--HHHHHHHHTT--TTS-EEEEEETT--GGGGS
T ss_pred --------------------ccCCCC-CEEEEECcc-cCChhhHHHHHHHhccCCCcEEEEECCCcCCCcc
Confidence 011234 999998875 3322222222233344567788899999998764
No 126
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.21 E-value=3e-05 Score=54.94 Aligned_cols=53 Identities=17% Similarity=0.270 Sum_probs=43.2
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
++.+|.++.+..++-++||||||.-...++..+.+....| .+...|.+.+.++
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P-~lnK~V~l~gpfN 177 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLP-PLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCc-chhheEEeccccc
Confidence 4567788889999999999999999999999987654434 6888888877665
No 127
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.20 E-value=1.9e-05 Score=58.28 Aligned_cols=44 Identities=27% Similarity=0.277 Sum_probs=39.0
Q ss_pred CEEEEeeCccccccc--HHHHHHHHHHCC-CceEEEEeCCCCccccc
Q 038786 114 PFLLCVAGNDLIKDT--EMEYYEAMKKAG-KDVELLVSPGMGHSFYL 157 (186)
Q Consensus 114 P~li~~g~~D~~~~~--~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~ 157 (186)
|++|.+|..|.++|. ...+.+++.+.| .+++++.+++.+|....
T Consensus 221 Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~ 267 (290)
T PF03583_consen 221 PVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAA 267 (290)
T ss_pred CEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhh
Confidence 999999999988874 578888898989 89999999999998754
No 128
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.18 E-value=8.2e-06 Score=59.46 Aligned_cols=130 Identities=13% Similarity=0.155 Sum_probs=82.2
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHH
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLS 83 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (186)
+..++.+++.+++.|+|||.||.-++...... .++++.|++-.|+.+-+.
T Consensus 231 ~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-------t~FrcaI~lD~WM~Pl~~----------------------- 280 (399)
T KOG3847|consen 231 LEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-------TDFRCAIALDAWMFPLDQ----------------------- 280 (399)
T ss_pred HHHHhcchhhhhhhheeccccchhhhhhhccc-------cceeeeeeeeeeecccch-----------------------
Confidence 34567777999999999999998887776644 379999998888643210
Q ss_pred hcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccc-ccccc
Q 038786 84 FALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL-DKIAV 162 (186)
Q Consensus 84 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~-~~~~~ 162 (186)
..+...+. |+|++. ..|....++....++....+..-.+..+.|.-|--.. .++.+
T Consensus 281 ---------------------~~~~~arq-P~~fin-v~~fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~ 337 (399)
T KOG3847|consen 281 ---------------------LQYSQARQ-PTLFIN-VEDFQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVT 337 (399)
T ss_pred ---------------------hhhhhccC-CeEEEE-cccccchhHHHHHHhhhCCCccceEEEEccceecccccCcccc
Confidence 01122334 898888 4455555666667777666666688888888885432 11111
Q ss_pred ----------CCCcchhHHHHHHHHHHHHHhhhC
Q 038786 163 ----------DMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 163 ----------~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
..+..--+..+-..+..+.||++|
T Consensus 338 p~~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h 371 (399)
T KOG3847|consen 338 PNWIGKVFKVKGETDPYEAMQIAIRASLAFLQKH 371 (399)
T ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHHHHHHhh
Confidence 000111134556677778888764
No 129
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.18 E-value=9.3e-06 Score=61.53 Aligned_cols=52 Identities=13% Similarity=0.138 Sum_probs=38.4
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCC
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQE 59 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~ 59 (186)
+++.+.+..+.++|.++|+++||.++..++...... +|+.+.++....|...
T Consensus 170 aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k-----~I~S~T~lts~~DF~~ 221 (445)
T COG3243 170 AIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAK-----RIKSLTLLTSPVDFSH 221 (445)
T ss_pred HHHHHHHHhCccccceeeEecchHHHHHHHHhhhhc-----ccccceeeecchhhcc
Confidence 445556666889999999999999999888877321 4888777766556543
No 130
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.16 E-value=1.4e-05 Score=57.18 Aligned_cols=42 Identities=24% Similarity=0.210 Sum_probs=37.8
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQE 59 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~ 59 (186)
+.++..|+|||+||.+++...+.+ |..+...+++||.+.+..
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~------p~~F~~y~~~SPSlWw~n 176 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTY------PDCFGRYGLISPSLWWHN 176 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcC------cchhceeeeecchhhhCC
Confidence 788899999999999999999988 779999999999986543
No 131
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.16 E-value=2.5e-06 Score=65.92 Aligned_cols=46 Identities=24% Similarity=0.393 Sum_probs=37.2
Q ss_pred cccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCC
Q 038786 4 NNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGF 55 (186)
Q Consensus 4 l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~ 55 (186)
+++|.++. +.++++|+||||||++|..++.+. +.++.+++++.|..
T Consensus 107 I~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~------p~rV~rItgLDPAg 154 (442)
T TIGR03230 107 VNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLT------KHKVNRITGLDPAG 154 (442)
T ss_pred HHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhC------CcceeEEEEEcCCC
Confidence 44554333 578999999999999999998766 56899999999864
No 132
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.15 E-value=2e-05 Score=63.34 Aligned_cols=50 Identities=14% Similarity=0.041 Sum_probs=40.5
Q ss_pred cccccccccC-CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCC
Q 038786 2 RENNWLTEHV-DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLR 57 (186)
Q Consensus 2 ~~l~~l~~~~-~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~ 57 (186)
++++|+.++. ...+|+++|+|+||.+++.++... |+.+++++..++..+.
T Consensus 84 ~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~------~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 84 DLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQ------PPALRAIAPQEGVWDL 134 (550)
T ss_pred HHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccC------CCceeEEeecCcccch
Confidence 4567886663 336999999999999999999866 6689999999888664
No 133
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.14 E-value=3.9e-05 Score=57.15 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=27.4
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
+.|+.++ +..++.|.|-||||.+|...+...
T Consensus 166 l~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~ 196 (348)
T PF09752_consen 166 LHWLERE-GYGPLGLTGISMGGHMAALAASNW 196 (348)
T ss_pred HHHHHhc-CCCceEEEEechhHhhHHhhhhcC
Confidence 5788888 688999999999999999888866
No 134
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.13 E-value=8.7e-06 Score=55.52 Aligned_cols=125 Identities=22% Similarity=0.227 Sum_probs=74.2
Q ss_pred CCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCC
Q 038786 11 VDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNS 90 (186)
Q Consensus 11 ~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (186)
-+.++++|+|.|.|+-+.-....+.+... -.+++.+++++|........... .+++...
T Consensus 65 w~~~~vvLiGYSFGADvlP~~~nrLp~~~--r~~v~~v~Ll~p~~~~dFeihv~-------------------~wlg~~~ 123 (192)
T PF06057_consen 65 WGRKRVVLIGYSFGADVLPFIYNRLPAAL--RARVAQVVLLSPSTTADFEIHVS-------------------GWLGMGG 123 (192)
T ss_pred hCCceEEEEeecCCchhHHHHHhhCCHHH--HhheeEEEEeccCCcceEEEEhh-------------------hhcCCCC
Confidence 37899999999999988888877663211 13789999999975433211100 0111111
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCccc--ccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcch
Q 038786 91 DKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDL--IKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNT 168 (186)
Q Consensus 91 ~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 168 (186)
....... .+.+..+...|+++++|++|. +++ .+.. ..++....||++| |.
T Consensus 124 ~~~~~~~------~pei~~l~~~~v~CiyG~~E~d~~cp-------~l~~--~~~~~i~lpGgHH-fd------------ 175 (192)
T PF06057_consen 124 DDAAYPV------IPEIAKLPPAPVQCIYGEDEDDSLCP-------SLRQ--PGVEVIALPGGHH-FD------------ 175 (192)
T ss_pred CcccCCc------hHHHHhCCCCeEEEEEcCCCCCCcCc-------cccC--CCcEEEEcCCCcC-CC------------
Confidence 1110001 112333334499999999873 333 2233 3578889998655 43
Q ss_pred hHHHHHHHHHHHHHhhh
Q 038786 169 AAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 169 ~~~~~~~~~~i~~fl~~ 185 (186)
.+.+.+.+.|++-+++
T Consensus 176 -~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 176 -GDYDALAKRILDALKA 191 (192)
T ss_pred -CCHHHHHHHHHHHHhc
Confidence 3467788888777664
No 135
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.12 E-value=2.8e-05 Score=52.13 Aligned_cols=119 Identities=19% Similarity=0.127 Sum_probs=71.8
Q ss_pred CCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCCC
Q 038786 13 FQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDK 92 (186)
Q Consensus 13 ~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (186)
.+.++|++||.|+..++.++.+.. .+++|+++++|.--... ..... .
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~------~~V~GalLVAppd~~~~---~~~~~-----------------~------- 104 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQ------RQVAGALLVAPPDVSRP---EIRPK-----------------H------- 104 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhh------hccceEEEecCCCcccc---ccchh-----------------h-------
Confidence 445999999999999999998873 38999999999742211 00000 0
Q ss_pred CCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHH
Q 038786 93 GHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQT 172 (186)
Q Consensus 93 ~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~ 172 (186)
.....|.- ...... |.+++.+.+|+.++ .+.++.+... ....+.....+||.--...++ ..
T Consensus 105 -~~tf~~~p-----~~~lpf-ps~vvaSrnDp~~~--~~~a~~~a~~-wgs~lv~~g~~GHiN~~sG~g---------~w 165 (181)
T COG3545 105 -LMTFDPIP-----REPLPF-PSVVVASRNDPYVS--YEHAEDLANA-WGSALVDVGEGGHINAESGFG---------PW 165 (181)
T ss_pred -ccccCCCc-----cccCCC-ceeEEEecCCCCCC--HHHHHHHHHh-ccHhheecccccccchhhcCC---------Cc
Confidence 00001100 111223 89999999999965 3344444332 135777888889977654432 24
Q ss_pred HHHHHHHHHHh
Q 038786 173 CGLFQGIAEFM 183 (186)
Q Consensus 173 ~~~~~~i~~fl 183 (186)
.+....+.+|+
T Consensus 166 peg~~~l~~~~ 176 (181)
T COG3545 166 PEGYALLAQLL 176 (181)
T ss_pred HHHHHHHHHHh
Confidence 44555555554
No 136
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.08 E-value=6.5e-06 Score=61.37 Aligned_cols=44 Identities=34% Similarity=0.485 Sum_probs=36.8
Q ss_pred ccccccCCCCceE-EeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCC
Q 038786 5 NWLTEHVDFQRVF-LIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPG 54 (186)
Q Consensus 5 ~~l~~~~~~~~i~-l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~ 54 (186)
..|.+++++++++ |+|-||||..|+..+..+ |++++.++.++..
T Consensus 137 ~~ll~~LGI~~l~avvGgSmGGMqaleWa~~y------Pd~V~~~i~ia~~ 181 (368)
T COG2021 137 RLLLDALGIKKLAAVVGGSMGGMQALEWAIRY------PDRVRRAIPIATA 181 (368)
T ss_pred HHHHHhcCcceEeeeeccChHHHHHHHHHHhC------hHHHhhhheeccc
Confidence 3456777999998 999999999999999988 7788887777654
No 137
>COG3150 Predicted esterase [General function prediction only]
Probab=98.01 E-value=4e-05 Score=50.94 Aligned_cols=130 Identities=16% Similarity=0.131 Sum_probs=70.4
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSD 91 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (186)
+.+...|+|.|.||+.|..++.+. -+++ |+++|...+.............++ .+....
T Consensus 57 ~~~~p~ivGssLGGY~At~l~~~~--------Gira-v~~NPav~P~e~l~gylg~~en~y-------------tg~~y~ 114 (191)
T COG3150 57 GDESPLIVGSSLGGYYATWLGFLC--------GIRA-VVFNPAVRPYELLTGYLGRPENPY-------------TGQEYV 114 (191)
T ss_pred CCCCceEEeecchHHHHHHHHHHh--------CChh-hhcCCCcCchhhhhhhcCCCCCCC-------------CcceEE
Confidence 334589999999999999999988 3554 566776543321111111111000 000000
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCEEEEeeCc-ccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhH
Q 038786 92 KGHPYTCPMGPAGPPIDGLKLPPFLLCVAGN-DLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAA 170 (186)
Q Consensus 92 ~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~-D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 170 (186)
.+..-+..+. ...+..++.|..|.+.... |.+.| .+.....+. .+...+++|+.|.|..
T Consensus 115 le~~hI~~l~--~~~~~~l~~p~~~~lL~qtgDEvLD-yr~a~a~y~----~~~~~V~dgg~H~F~~------------- 174 (191)
T COG3150 115 LESRHIATLC--VLQFRELNRPRCLVLLSQTGDEVLD-YRQAVAYYH----PCYEIVWDGGDHKFKG------------- 174 (191)
T ss_pred eehhhHHHHH--HhhccccCCCcEEEeecccccHHHH-HHHHHHHhh----hhhheeecCCCccccc-------------
Confidence 0000000000 1123334456677666665 87764 344444444 3466778999999965
Q ss_pred HHHHHHHHHHHHhh
Q 038786 171 QTCGLFQGIAEFMR 184 (186)
Q Consensus 171 ~~~~~~~~i~~fl~ 184 (186)
....++.|+.|+.
T Consensus 175 -f~~~l~~i~aF~g 187 (191)
T COG3150 175 -FSRHLQRIKAFKG 187 (191)
T ss_pred -hHHhHHHHHHHhc
Confidence 5667778888864
No 138
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=97.95 E-value=6.4e-06 Score=60.30 Aligned_cols=52 Identities=21% Similarity=0.218 Sum_probs=41.8
Q ss_pred cccccccccC-CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCC
Q 038786 2 RENNWLTEHV-DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQE 59 (186)
Q Consensus 2 ~~l~~l~~~~-~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~ 59 (186)
+.++|+.++. .-.+|.++|.|.+|..+..+|... |+.+++++...+..+...
T Consensus 88 d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~------~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 88 DTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARR------PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp HHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-------TTEEEEEEESE-SBTCC
T ss_pred HHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcC------CCCceEEEecccCCcccc
Confidence 5789998876 334999999999999999999855 679999999988877543
No 139
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.86 E-value=1.1e-05 Score=57.33 Aligned_cols=41 Identities=24% Similarity=0.290 Sum_probs=31.7
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGF 55 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~ 55 (186)
..++|+++||||||.+|..++...... +..++.+|.++.+.
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~---~~~v~~iitl~tPh 123 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYD---PDSVKTIITLGTPH 123 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccc---cccEEEEEEEcCCC
Confidence 788999999999999988888654321 34788888876554
No 140
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.84 E-value=0.0001 Score=58.27 Aligned_cols=101 Identities=24% Similarity=0.330 Sum_probs=64.7
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSD 91 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (186)
.-..|+|+|.|||+.++..+.....+ ..++++|.+.=.++..+... ..
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsd-----v~V~~vVCigypl~~vdgpr---------------------------gi 295 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSD-----VEVDAVVCIGYPLDTVDGPR---------------------------GI 295 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCC-----ceEEEEEEecccccCCCccc---------------------------CC
Confidence 55689999999998777777654422 24788777644333211100 00
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccH--HHHHHHHHHCCCceEEEEeCCCCccccccc
Q 038786 92 KGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTE--MEYYEAMKKAGKDVELLVSPGMGHSFYLDK 159 (186)
Q Consensus 92 ~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 159 (186)
. ++.+-..+. |+|++.|.+|..++.. +++.++++ .+++++++.+++|.+..-+
T Consensus 296 r-----------DE~Lldmk~-PVLFV~Gsnd~mcspn~ME~vreKMq---A~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 296 R-----------DEALLDMKQ-PVLFVIGSNDHMCSPNSMEEVREKMQ---AEVELHVIGGADHSMAIPK 350 (784)
T ss_pred c-----------chhhHhcCC-ceEEEecCCcccCCHHHHHHHHHHhh---ccceEEEecCCCccccCCc
Confidence 0 111222445 9999999999887543 44444444 4689999999999998743
No 141
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.72 E-value=1.4e-05 Score=63.75 Aligned_cols=50 Identities=20% Similarity=0.226 Sum_probs=40.5
Q ss_pred cccccccccC-----CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCC
Q 038786 2 RENNWLTEHV-----DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGF 55 (186)
Q Consensus 2 ~~l~~l~~~~-----~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~ 55 (186)
.||+|+++++ |+++|.|+|+|+||..+..++..... ...++++|+.|+..
T Consensus 191 ~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~----~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 191 LALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSS----KGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGG----TTSBSEEEEES--T
T ss_pred HHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccc----cccccccccccccc
Confidence 4799999997 99999999999999999988876433 23699999999843
No 142
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.69 E-value=2.6e-05 Score=60.62 Aligned_cols=47 Identities=21% Similarity=0.171 Sum_probs=34.6
Q ss_pred cCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCC
Q 038786 10 HVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQ 58 (186)
Q Consensus 10 ~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~ 58 (186)
+.+.++|+|+||||||.++..++...++. . ...++.+|++++.....
T Consensus 158 ~~g~~kV~LVGHSMGGlva~~fl~~~p~~-~-~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 158 ASGGKKVNIISHSMGGLLVKCFMSLHSDV-F-EKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HcCCCCEEEEEECHhHHHHHHHHHHCCHh-H-HhHhccEEEECCCCCCC
Confidence 34678999999999999999999876321 1 12478888887765543
No 143
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.69 E-value=0.00017 Score=51.80 Aligned_cols=59 Identities=20% Similarity=0.150 Sum_probs=51.6
Q ss_pred CEEEEeeCccccccc--HHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHh
Q 038786 114 PFLLCVAGNDLIKDT--EMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFM 183 (186)
Q Consensus 114 P~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 183 (186)
|-|.++++.|.+++. .+++++..++.|.+++.+.+++..|.-+.. ..+++..+.+.+|+
T Consensus 180 p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r-----------~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 180 PRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLR-----------KHPDRYWRAVDEFW 240 (240)
T ss_pred CeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcc-----------cCHHHHHHHHHhhC
Confidence 899999999999873 578888888899999999999999999875 56788898888874
No 144
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.65 E-value=0.0011 Score=48.36 Aligned_cols=38 Identities=29% Similarity=0.431 Sum_probs=33.9
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGF 55 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~ 55 (186)
|++||+|.|.|.||.|+..++..+ |+.+.++..+++..
T Consensus 142 dp~RVyvtGlS~GG~Ma~~lac~~------p~~faa~A~VAg~~ 179 (312)
T COG3509 142 DPARVYVTGLSNGGRMANRLACEY------PDIFAAIAPVAGLL 179 (312)
T ss_pred CcceEEEEeeCcHHHHHHHHHhcC------cccccceeeeeccc
Confidence 788999999999999999999988 67888888887765
No 145
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.64 E-value=6.7e-05 Score=49.13 Aligned_cols=44 Identities=20% Similarity=0.110 Sum_probs=29.5
Q ss_pred CCCCceEEeecChhHHHHHHHHHHhccCCCC-CCceeEEEecCCC
Q 038786 11 VDFQRVFLIGDSSGGNVVHEVAARAGQADVS-PLRVAGAIPIHPG 54 (186)
Q Consensus 11 ~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~-p~~~~~~vl~~p~ 54 (186)
....+|++.|||+||.+|..++......... +..+..+..-+|.
T Consensus 61 ~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~ 105 (140)
T PF01764_consen 61 YPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPR 105 (140)
T ss_dssp STTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S-
T ss_pred ccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCcc
Confidence 3457899999999999999999887554322 2345554444444
No 146
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.63 E-value=1e-05 Score=64.12 Aligned_cols=51 Identities=22% Similarity=0.303 Sum_probs=41.0
Q ss_pred cccccccccC-----CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 2 RENNWLTEHV-----DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 2 ~~l~~l~~~~-----~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
.|++|+++++ |+++|.|+|+|+||.++..++..... ...++++|+.|+...
T Consensus 159 ~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~----~~lf~~~i~~sg~~~ 214 (493)
T cd00312 159 LALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDS----KGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcch----hHHHHHHhhhcCCcc
Confidence 4789998884 89999999999999999988875421 236888888887654
No 147
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.62 E-value=7.9e-05 Score=54.39 Aligned_cols=44 Identities=27% Similarity=0.339 Sum_probs=35.5
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQ 58 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~ 58 (186)
...+++++|||.|++|++.++.+..+. ..++.+++++.|.+..-
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~---~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDL---KFRVKKVILLFPTIEDI 125 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhcccc---CCceeEEEEeCCccccc
Confidence 356899999999999999999988411 25799999999976543
No 148
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.55 E-value=0.00039 Score=49.41 Aligned_cols=55 Identities=16% Similarity=0.254 Sum_probs=39.0
Q ss_pred CEEEEeeCcccccccHHHHHHHHHHCC--CceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHh
Q 038786 114 PFLLCVAGNDLIKDTEMEYYEAMKKAG--KDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFM 183 (186)
Q Consensus 114 P~li~~g~~D~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 183 (186)
-+.+..|+.|.-+| ..+...+++.- .++++.+ .++.|.|-. ...+.+.+.+.+.+
T Consensus 244 ~l~Fyygt~DgW~p--~~~~d~~kdd~~eed~~Lde-dki~HAFV~------------~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 244 SLWFYYGTNDGWVP--SHYYDYYKDDVPEEDLKLDE-DKIPHAFVV------------KHAQYMANAVFDMI 300 (301)
T ss_pred EEEEEccCCCCCcc--hHHHHHHhhhcchhceeecc-ccCCcceee------------cccHHHHHHHHHhh
Confidence 57899999998876 45555555532 3566666 789999987 45667777777665
No 149
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.53 E-value=3.7e-05 Score=54.90 Aligned_cols=51 Identities=27% Similarity=0.432 Sum_probs=40.6
Q ss_pred cccccccccC----------CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 2 RENNWLTEHV----------DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 2 ~~l~~l~~~~----------~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
+.++||.+.+ +.+++.++|||.||..|.++|+.+. . ...+.++|.+-|+-.
T Consensus 98 ~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a-~---~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 98 SVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA-T---SLKFSALIGIDPVAG 158 (307)
T ss_pred HHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc-c---cCchhheecccccCC
Confidence 4567775542 8899999999999999999999774 1 346899999999854
No 150
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.52 E-value=5.7e-05 Score=53.57 Aligned_cols=51 Identities=18% Similarity=0.227 Sum_probs=34.9
Q ss_pred ccccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCC
Q 038786 3 ENNWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGF 55 (186)
Q Consensus 3 ~l~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~ 55 (186)
|++|+.+.. ..+++++.|||.||++|...+....... .++|..+..+.++.
T Consensus 71 A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~--~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 71 ALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEI--QDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHH--hhheeEEEEeeCCC
Confidence 445554432 3346999999999999999998753211 24788888776653
No 151
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=97.51 E-value=0.00085 Score=51.61 Aligned_cols=52 Identities=12% Similarity=0.302 Sum_probs=40.3
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCC
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQ 58 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~ 58 (186)
++++++..+.++++.+|||.|+......+....... .+|+..++++|+....
T Consensus 151 IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~---~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 151 IDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYN---KKIKSFIALAPAAFPK 202 (403)
T ss_pred HHHHHHhccccceEEEEEEccchhheehhcccchhh---hhhheeeeecchhhhc
Confidence 566677778899999999999998888887653211 3799999999987443
No 152
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.50 E-value=0.00023 Score=47.42 Aligned_cols=42 Identities=14% Similarity=0.112 Sum_probs=30.1
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGF 55 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~ 55 (186)
...+|+++|||+||.+|..++....... +.....++.+.|..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~--~~~~~~~~~fg~p~ 67 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRG--LGRLVRVYTFGPPR 67 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhcc--CCCceEEEEeCCCc
Confidence 4679999999999999999998874321 12345566665554
No 153
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.50 E-value=0.00017 Score=54.15 Aligned_cols=29 Identities=38% Similarity=0.484 Sum_probs=24.5
Q ss_pred ccccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 7 LTEHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 7 l~~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
+..++|..+|.++|||.||+-++.++...
T Consensus 152 l~~~ld~~~Vgv~GhS~GG~T~m~laGA~ 180 (365)
T COG4188 152 LAGRLDPQRVGVLGHSFGGYTAMELAGAE 180 (365)
T ss_pred cccccCccceEEEecccccHHHHHhcccc
Confidence 44556899999999999999999998644
No 154
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.47 E-value=0.00047 Score=42.79 Aligned_cols=58 Identities=21% Similarity=0.322 Sum_probs=42.6
Q ss_pred CCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 113 PPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 113 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
+|+|++.++.|+..+ .+.++++.+.-...+++.+++.+|+.... ...-+.+.+.+||.
T Consensus 35 ~piL~l~~~~Dp~TP--~~~a~~~~~~l~~s~lvt~~g~gHg~~~~------------~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 35 PPILVLGGTHDPVTP--YEGARAMAARLPGSRLVTVDGAGHGVYAG------------GSPCVDKAVDDYLL 92 (103)
T ss_pred CCEEEEecCcCCCCc--HHHHHHHHHHCCCceEEEEeccCcceecC------------CChHHHHHHHHHHH
Confidence 599999999999955 55566666544457999999999999841 13445666677765
No 155
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=97.44 E-value=0.00077 Score=48.91 Aligned_cols=44 Identities=23% Similarity=0.387 Sum_probs=34.6
Q ss_pred cccccCCC-CceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCC
Q 038786 6 WLTEHVDF-QRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLR 57 (186)
Q Consensus 6 ~l~~~~~~-~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~ 57 (186)
.|.++++. ++++.+|||.|+-.|+.++... +..|+++++|..-.
T Consensus 95 ~ll~~l~i~~~~i~~gHSrGcenal~la~~~--------~~~g~~lin~~G~r 139 (297)
T PF06342_consen 95 ALLDELGIKGKLIFLGHSRGCENALQLAVTH--------PLHGLVLINPPGLR 139 (297)
T ss_pred HHHHHcCCCCceEEEEeccchHHHHHHHhcC--------ccceEEEecCCccc
Confidence 34555544 5899999999999999999977 36799999987543
No 156
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=97.41 E-value=0.00021 Score=50.78 Aligned_cols=38 Identities=29% Similarity=0.254 Sum_probs=31.5
Q ss_pred CceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCC
Q 038786 14 QRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPG 54 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~ 54 (186)
.++.|+|||+||.+|..+|.+....+ ..+..++++.+.
T Consensus 66 gp~~L~G~S~Gg~lA~E~A~~Le~~G---~~v~~l~liD~~ 103 (229)
T PF00975_consen 66 GPYVLAGWSFGGILAFEMARQLEEAG---EEVSRLILIDSP 103 (229)
T ss_dssp SSEEEEEETHHHHHHHHHHHHHHHTT----SESEEEEESCS
T ss_pred CCeeehccCccHHHHHHHHHHHHHhh---hccCceEEecCC
Confidence 39999999999999999998886653 368888888754
No 157
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.34 E-value=0.00058 Score=52.02 Aligned_cols=135 Identities=19% Similarity=0.099 Sum_probs=74.4
Q ss_pred CceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHH---hcCCCCC
Q 038786 14 QRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLS---FALPLNS 90 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 90 (186)
-+++++|+|-||++|..++.-. |..+.+++--|.+..+..+.--.++..-..+...... .+.. .++....
T Consensus 184 lp~I~~G~s~G~yla~l~~k~a------P~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~~-~~~~~~~i~~~~Kt 256 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIA------PWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGEF-FNFKNIRIYCFDKT 256 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhC------ccceeEEEecCccccchhheeeeeecCcccccccccc-cccCCEEEEEEecc
Confidence 3899999999999999888766 7789998888777543222111111110000000000 0000 0011112
Q ss_pred CCCCCCcCCCC------------CC-----CCCCCCCCCCCEEEEeeCccccccc--HHHHHHHHHHCCCceEEEEe---
Q 038786 91 DKGHPYTCPMG------------PA-----GPPIDGLKLPPFLLCVAGNDLIKDT--EMEYYEAMKKAGKDVELLVS--- 148 (186)
Q Consensus 91 ~~~~~~~~p~~------------~~-----~~~~~~~~~pP~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~--- 148 (186)
.++.-.-+|.+ .. ..... +-|-.+..|+..|.+.|. -.++.+.+++.|-+++++.+
T Consensus 257 ~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n--~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkde 334 (403)
T PF11144_consen 257 FWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYN--KKIIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDE 334 (403)
T ss_pred ccccCCCCccccChHHHHHHHhcChHHHHHHHhcc--cceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecCh
Confidence 22221122211 00 00110 122456779999988873 47899999999999999988
Q ss_pred --------CCCCccccc
Q 038786 149 --------PGMGHSFYL 157 (186)
Q Consensus 149 --------~~~~H~~~~ 157 (186)
.+..|+...
T Consensus 335 s~iDGkfIKnl~HGmgi 351 (403)
T PF11144_consen 335 SEIDGKFIKNLEHGMGI 351 (403)
T ss_pred hhccchheeccccCCCC
Confidence 357788765
No 158
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.33 E-value=2.6e-05 Score=60.35 Aligned_cols=51 Identities=22% Similarity=0.293 Sum_probs=40.4
Q ss_pred cccccccccC-----CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 2 RENNWLTEHV-----DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 2 ~~l~~l~~~~-----~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
.||+|+++++ |+++|.|+|+|+||+.++.++..-... ..+..+|+.||...
T Consensus 163 lALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~Ak----GLF~rAi~~Sg~~~ 218 (491)
T COG2272 163 LALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAK----GLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccch----HHHHHHHHhCCCCC
Confidence 3789999996 999999999999999888887643221 24677888888765
No 159
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.31 E-value=0.0002 Score=51.30 Aligned_cols=54 Identities=17% Similarity=0.199 Sum_probs=39.3
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHhccCCCC---CCceeEEEecCCCCCC
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVS---PLRVAGAIPIHPGFLR 57 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~---p~~~~~~vl~~p~~~~ 57 (186)
|..|.+..+..+|.|++||||+.+.+............ ...+..+++.+|-.+.
T Consensus 83 L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 83 LRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred HHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 34445555788999999999999999988776443321 2367888998887653
No 160
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.22 E-value=0.00044 Score=49.31 Aligned_cols=43 Identities=16% Similarity=0.098 Sum_probs=29.6
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGF 55 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~ 55 (186)
...+|++.|||+||.+|+.++....... .+..+.++..-+|..
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~~~~-~~~~i~~~tFg~P~v 168 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLRLRG-PGSDVTVYTFGQPRV 168 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHHhhC-CCCceEEEEeCCCCC
Confidence 3568999999999999999998764321 123466555555543
No 161
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.22 E-value=0.0047 Score=46.20 Aligned_cols=117 Identities=16% Similarity=0.231 Sum_probs=72.0
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSD 91 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (186)
+..+++|+||+.|+++++.+..... +..++++|++++........ ..+.
T Consensus 191 ~~~~ivlIg~G~gA~~~~~~la~~~-----~~~~daLV~I~a~~p~~~~n--------------~~l~------------ 239 (310)
T PF12048_consen 191 GGKNIVLIGHGTGAGWAARYLAEKP-----PPMPDALVLINAYWPQPDRN--------------PALA------------ 239 (310)
T ss_pred CCceEEEEEeChhHHHHHHHHhcCC-----CcccCeEEEEeCCCCcchhh--------------hhHH------------
Confidence 3566999999999999999998773 34689999999975322110 0000
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHH--CCCceEEEEeCCCCccccccccccCCCcchh
Q 038786 92 KGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKK--AGKDVELLVSPGMGHSFYLDKIAVDMDPNTA 169 (186)
Q Consensus 92 ~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 169 (186)
+.+...++ |+|=+++.+...........+.+.+ ....++-..+.+..|.+..
T Consensus 240 -------------~~la~l~i-PvLDi~~~~~~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~------------ 293 (310)
T PF12048_consen 240 -------------EQLAQLKI-PVLDIYSADNPASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSG------------ 293 (310)
T ss_pred -------------HHhhccCC-CEEEEecCCChHHHHHHHHHHHHHHhccCCCceeEecCCCCCChhh------------
Confidence 11222345 9998888773332122222222222 2235666667777665532
Q ss_pred HHHHHHHHHHHHHhhhC
Q 038786 170 AQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 170 ~~~~~~~~~i~~fl~~~ 186 (186)
+.+.+++.|.-|++++
T Consensus 294 -~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 294 -WQEQLLRRIRGWLKRH 309 (310)
T ss_pred -HHHHHHHHHHHHHHhh
Confidence 3444999999999864
No 162
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.09 E-value=0.00036 Score=53.80 Aligned_cols=47 Identities=23% Similarity=0.185 Sum_probs=35.6
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQ 58 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~ 58 (186)
..++|+|+||||||.++..++............|+++|.+++.....
T Consensus 117 ~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 117 NGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred cCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 36799999999999999999987743211124689999998876543
No 163
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.04 E-value=0.00026 Score=53.25 Aligned_cols=49 Identities=18% Similarity=0.190 Sum_probs=33.2
Q ss_pred ccccccc--CCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 4 NNWLTEH--VDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 4 l~~l~~~--~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
+.+|.+. .+.++|+|+|||+||++|..++..... ..++..+..+-|...
T Consensus 138 l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~----~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 138 LSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKG----GGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT-------SSEEEEES-B-T
T ss_pred HHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccC----cceeeEEEecCcccc
Confidence 4555532 388999999999999999999888743 136777787777643
No 164
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.87 E-value=0.00093 Score=50.04 Aligned_cols=55 Identities=16% Similarity=0.234 Sum_probs=41.7
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHhccCCC--CCCceeEEEecCCCCCC
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADV--SPLRVAGAIPIHPGFLR 57 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~--~p~~~~~~vl~~p~~~~ 57 (186)
.+.+|.+....++|+|++||||..+++....+...++. .+.+|+-+|+.+|=.|.
T Consensus 180 ~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 180 LLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred HHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 45566666678999999999999999998876644322 24578888998887664
No 165
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.85 E-value=0.057 Score=42.81 Aligned_cols=53 Identities=19% Similarity=0.323 Sum_probs=39.3
Q ss_pred CCCCCCCCCEEEEeeCcccccccHHHH---------HHHHHHCCCceEEEEeCCCCccccccc
Q 038786 106 PIDGLKLPPFLLCVAGNDLIKDTEMEY---------YEAMKKAGKDVELLVSPGMGHSFYLDK 159 (186)
Q Consensus 106 ~~~~~~~pP~li~~g~~D~~~~~~~~~---------~~~l~~~~~~~~~~~~~~~~H~~~~~~ 159 (186)
.++.+++ |++++.|..|.++|..+.+ .+.++..|...-+.+-+..||.=.+..
T Consensus 292 DLr~Ir~-Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIFVS 353 (581)
T PF11339_consen 292 DLRNIRS-PIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIFVS 353 (581)
T ss_pred ehhhCCC-CEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEEec
Confidence 4666778 9999999999998865542 334556666677777788999877753
No 166
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.81 E-value=0.0021 Score=45.37 Aligned_cols=63 Identities=14% Similarity=0.237 Sum_probs=39.8
Q ss_pred CCCCCCCCEEEEeeCcccccccH--HHHHHHHHHCCCceEEEEeCC----CCccccccccccCCCcchhHHHHHHHHHHH
Q 038786 107 IDGLKLPPFLLCVAGNDLIKDTE--MEYYEAMKKAGKDVELLVSPG----MGHSFYLDKIAVDMDPNTAAQTCGLFQGIA 180 (186)
Q Consensus 107 ~~~~~~pP~li~~g~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~----~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~ 180 (186)
+..+++ |++.+...+|+-.|.. ..|..... +.+.+...++. .+|.=.+. +..+.+.++++
T Consensus 212 yaaVrt-Pi~~~~~~DD~w~P~As~d~f~~~y~--nApl~~~~~~~~~~~lGH~gyfR-----------~~~Ealwk~~L 277 (281)
T COG4757 212 YAAVRT-PITFSRALDDPWAPPASRDAFASFYR--NAPLEMRDLPRAEGPLGHMGYFR-----------EPFEALWKEML 277 (281)
T ss_pred HHHhcC-ceeeeccCCCCcCCHHHHHHHHHhhh--cCcccceecCcccCcccchhhhc-----------cchHHHHHHHH
Confidence 444556 9999999999887743 34443333 33566666654 47766552 12367777777
Q ss_pred HHh
Q 038786 181 EFM 183 (186)
Q Consensus 181 ~fl 183 (186)
+|+
T Consensus 278 ~w~ 280 (281)
T COG4757 278 GWF 280 (281)
T ss_pred Hhh
Confidence 776
No 167
>PLN02454 triacylglycerol lipase
Probab=96.80 E-value=0.0018 Score=49.74 Aligned_cols=41 Identities=22% Similarity=0.241 Sum_probs=27.2
Q ss_pred ceEEeecChhHHHHHHHHHHhccCCCC--CCceeEEEecCCCC
Q 038786 15 RVFLIGDSSGGNVVHEVAARAGQADVS--PLRVAGAIPIHPGF 55 (186)
Q Consensus 15 ~i~l~G~S~GG~la~~~a~~~~~~~~~--p~~~~~~vl~~p~~ 55 (186)
.|++.|||+||.||+..|......+.. ...+..+..-+|-.
T Consensus 229 sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRV 271 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQV 271 (414)
T ss_pred eEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcc
Confidence 499999999999999999766433221 11345555555543
No 168
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.64 E-value=0.0084 Score=43.83 Aligned_cols=62 Identities=29% Similarity=0.443 Sum_probs=44.3
Q ss_pred CEEEEeeCccccccc--HHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 114 PFLLCVAGNDLIKDT--EMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 114 P~li~~g~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
|+|+++|++|..++. ...+.+..... +.+..+++++.|....... +...+.++.+.+|+.++
T Consensus 234 P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~---------~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 234 PVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNP---------PAVEQALDKLAEFLERH 297 (299)
T ss_pred ceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCcc---------HHHHHHHHHHHHHHHHh
Confidence 999999999988763 23333333322 6788889999999886221 34568999999999763
No 169
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.56 E-value=0.0057 Score=42.96 Aligned_cols=51 Identities=24% Similarity=0.229 Sum_probs=36.4
Q ss_pred cccccccC----CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCC
Q 038786 4 NNWLTEHV----DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQ 58 (186)
Q Consensus 4 l~~l~~~~----~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~ 58 (186)
++-+.+|+ ....|+|+|||.|..=.+.++... .-+..+++.|+.+|+.|..
T Consensus 93 l~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt----~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 93 LKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNT----TKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred HHHHHHHhhccCcccceEEEecCccchHHHHHHHhc----cchHHHHHHHHhCccchhh
Confidence 44445544 344999999999999888888322 1145788999999987643
No 170
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.28 E-value=0.0014 Score=52.74 Aligned_cols=49 Identities=20% Similarity=0.291 Sum_probs=36.6
Q ss_pred cccccccccC-----CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCC
Q 038786 2 RENNWLTEHV-----DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPG 54 (186)
Q Consensus 2 ~~l~~l~~~~-----~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~ 54 (186)
.|++|+++++ |+++|.|+|||+||..+..++...... ..+..+|.+++.
T Consensus 178 ~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~----~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 178 LALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSR----GLFHKAISMSGN 231 (545)
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhH----HHHHHHHhhccc
Confidence 4789999986 999999999999999998888643221 135555555554
No 171
>PLN00413 triacylglycerol lipase
Probab=96.23 E-value=0.0028 Score=49.36 Aligned_cols=24 Identities=25% Similarity=0.281 Sum_probs=20.3
Q ss_pred CCCceEEeecChhHHHHHHHHHHh
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
...++++.|||+||.+|+..+...
T Consensus 282 p~~kliVTGHSLGGALAtLaA~~L 305 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTAVL 305 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHHHH
Confidence 445899999999999999988643
No 172
>PLN02571 triacylglycerol lipase
Probab=96.22 E-value=0.0082 Score=46.30 Aligned_cols=22 Identities=18% Similarity=0.169 Sum_probs=19.7
Q ss_pred ceEEeecChhHHHHHHHHHHhc
Q 038786 15 RVFLIGDSSGGNVVHEVAARAG 36 (186)
Q Consensus 15 ~i~l~G~S~GG~la~~~a~~~~ 36 (186)
+|++.|||+||.||+..|....
T Consensus 227 sI~VTGHSLGGALAtLaA~dl~ 248 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDIV 248 (413)
T ss_pred cEEEeccchHHHHHHHHHHHHH
Confidence 6999999999999999998653
No 173
>PLN02408 phospholipase A1
Probab=96.16 E-value=0.0088 Score=45.43 Aligned_cols=23 Identities=17% Similarity=0.180 Sum_probs=20.2
Q ss_pred ceEEeecChhHHHHHHHHHHhcc
Q 038786 15 RVFLIGDSSGGNVVHEVAARAGQ 37 (186)
Q Consensus 15 ~i~l~G~S~GG~la~~~a~~~~~ 37 (186)
.|++.|||+||.||+..|.....
T Consensus 201 sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred eEEEeccchHHHHHHHHHHHHHH
Confidence 59999999999999999976643
No 174
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=95.99 E-value=0.0096 Score=45.38 Aligned_cols=141 Identities=18% Similarity=0.217 Sum_probs=75.2
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEec-CCCCCCCCCCcccccCCCCCCCcHHHHHHHHHhcC----
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPI-HPGFLRQERSKSELENPQSPLLTLDMVDKFLSFAL---- 86 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 86 (186)
+.++.+|.|.|==|.-+-..|.. .+++++++.+ .++++.........+.-.+.+ + ..+..|...-+
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~-------D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~w-s-~a~~dY~~~gi~~~l 240 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAV-------DPRVKAIVPIVIDVLNMKANLEHQYRSYGGNW-S-FAFQDYYNEGITQQL 240 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhcc-------CcceeEEeeEEEccCCcHHHHHHHHHHhCCCC-c-cchhhhhHhCchhhc
Confidence 78999999999999988777762 2478877754 344444332222222111000 0 00111110000
Q ss_pred CCCC-CCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccc-cc-cHHHHHHHHHHCCCceEEEEeCCCCccccccccccC
Q 038786 87 PLNS-DKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLI-KD-TEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVD 163 (186)
Q Consensus 87 ~~~~-~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~-~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 163 (186)
.... ......+.|+ ....+..+ |-||+.|+.|.+ ++ .+.-+...|. .+..+..+|+++|....
T Consensus 241 ~tp~f~~L~~ivDP~----~Y~~rL~~-PK~ii~atgDeFf~pD~~~~y~d~L~---G~K~lr~vPN~~H~~~~------ 306 (367)
T PF10142_consen 241 DTPEFDKLMQIVDPY----SYRDRLTM-PKYIINATGDEFFVPDSSNFYYDKLP---GEKYLRYVPNAGHSLIG------ 306 (367)
T ss_pred CCHHHHHHHHhcCHH----HHHHhcCc-cEEEEecCCCceeccCchHHHHhhCC---CCeeEEeCCCCCcccch------
Confidence 0000 0000111121 11233456 888999988843 44 3455555554 36799999999998843
Q ss_pred CCcchhHHHHHHHHHHHHHhh
Q 038786 164 MDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 164 ~~~~~~~~~~~~~~~i~~fl~ 184 (186)
.++.+.+..|++
T Consensus 307 ---------~~~~~~l~~f~~ 318 (367)
T PF10142_consen 307 ---------SDVVQSLRAFYN 318 (367)
T ss_pred ---------HHHHHHHHHHHH
Confidence 556667777765
No 175
>PLN02802 triacylglycerol lipase
Probab=95.83 E-value=0.015 Score=45.91 Aligned_cols=23 Identities=22% Similarity=0.265 Sum_probs=20.1
Q ss_pred ceEEeecChhHHHHHHHHHHhcc
Q 038786 15 RVFLIGDSSGGNVVHEVAARAGQ 37 (186)
Q Consensus 15 ~i~l~G~S~GG~la~~~a~~~~~ 37 (186)
+|+|.|||+||.+|+..|.....
T Consensus 331 sI~VTGHSLGGALAtLaA~dL~~ 353 (509)
T PLN02802 331 SITVTGHSLGAALALLVADELAT 353 (509)
T ss_pred eEEEeccchHHHHHHHHHHHHHH
Confidence 79999999999999999876643
No 176
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.83 E-value=0.0065 Score=50.01 Aligned_cols=23 Identities=30% Similarity=0.404 Sum_probs=19.8
Q ss_pred CCceEEeecChhHHHHHHHHHHh
Q 038786 13 FQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 13 ~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
+..|+++||||||.+|.+.+...
T Consensus 181 P~sVILVGHSMGGiVAra~~tlk 203 (973)
T KOG3724|consen 181 PHSVILVGHSMGGIVARATLTLK 203 (973)
T ss_pred CceEEEEeccchhHHHHHHHhhh
Confidence 66799999999999998887654
No 177
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.79 E-value=0.016 Score=42.01 Aligned_cols=41 Identities=29% Similarity=0.109 Sum_probs=32.9
Q ss_pred CCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 13 FQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 13 ~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
--.++|+|+|+||++|..+|.+....+ ..+..++++-++..
T Consensus 64 ~GPy~L~G~S~GG~vA~evA~qL~~~G---~~Va~L~llD~~~~ 104 (257)
T COG3319 64 EGPYVLLGWSLGGAVAFEVAAQLEAQG---EEVAFLGLLDAVPP 104 (257)
T ss_pred CCCEEEEeeccccHHHHHHHHHHHhCC---CeEEEEEEeccCCC
Confidence 348999999999999999999886654 36788887766654
No 178
>PLN02934 triacylglycerol lipase
Probab=95.79 E-value=0.0056 Score=48.17 Aligned_cols=24 Identities=17% Similarity=0.224 Sum_probs=20.3
Q ss_pred CCCceEEeecChhHHHHHHHHHHh
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
...++++.|||+||.+|+..+...
T Consensus 319 p~~kIvVTGHSLGGALAtLaA~~L 342 (515)
T PLN02934 319 KNAKFVVTGHSLGGALAILFPTVL 342 (515)
T ss_pred CCCeEEEeccccHHHHHHHHHHHH
Confidence 445899999999999999998643
No 179
>PLN02162 triacylglycerol lipase
Probab=95.74 E-value=0.0066 Score=47.30 Aligned_cols=24 Identities=25% Similarity=0.270 Sum_probs=19.9
Q ss_pred CCCceEEeecChhHHHHHHHHHHh
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
...++++.|||+||.+|+..+...
T Consensus 276 p~~kliVTGHSLGGALAtLaAa~L 299 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPAIL 299 (475)
T ss_pred CCceEEEEecChHHHHHHHHHHHH
Confidence 345899999999999999987643
No 180
>PF03283 PAE: Pectinacetylesterase
Probab=95.73 E-value=0.0086 Score=45.71 Aligned_cols=35 Identities=23% Similarity=0.161 Sum_probs=28.0
Q ss_pred cccccccc-C-CCCceEEeecChhHHHHHHHHHHhcc
Q 038786 3 ENNWLTEH-V-DFQRVFLIGDSSGGNVVHEVAARAGQ 37 (186)
Q Consensus 3 ~l~~l~~~-~-~~~~i~l~G~S~GG~la~~~a~~~~~ 37 (186)
.++||+++ . ++++|+|.|.|+||.-++..+-...+
T Consensus 143 vl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~ 179 (361)
T PF03283_consen 143 VLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRD 179 (361)
T ss_pred HHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHH
Confidence 46788777 3 78999999999999988887765543
No 181
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=95.61 E-value=0.0037 Score=44.24 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=22.3
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
++-+++..+. +|-|+||||||.++-.+....
T Consensus 66 I~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 66 IDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHHT---EEEEEETCHHHHHHHHHHHC
T ss_pred HHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 3444555578 999999999999998887644
No 182
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.52 E-value=0.015 Score=40.62 Aligned_cols=33 Identities=12% Similarity=0.174 Sum_probs=26.0
Q ss_pred ccccccccC-CCCceEEeecChhHHHHHHHHHHh
Q 038786 3 ENNWLTEHV-DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 3 ~l~~l~~~~-~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
|+++.+++. +-..++|+|||.|+.+...++...
T Consensus 83 AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 83 AFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 455544444 556999999999999999998766
No 183
>PLN02847 triacylglycerol lipase
Probab=95.50 E-value=0.024 Score=45.61 Aligned_cols=23 Identities=17% Similarity=0.271 Sum_probs=20.3
Q ss_pred CceEEeecChhHHHHHHHHHHhc
Q 038786 14 QRVFLIGDSSGGNVVHEVAARAG 36 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~~ 36 (186)
-++++.|||+||.+|+.++....
T Consensus 251 YkLVITGHSLGGGVAALLAilLR 273 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYILR 273 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHHh
Confidence 48999999999999999987664
No 184
>PLN02310 triacylglycerol lipase
Probab=95.50 E-value=0.011 Score=45.45 Aligned_cols=22 Identities=27% Similarity=0.261 Sum_probs=19.4
Q ss_pred CceEEeecChhHHHHHHHHHHh
Q 038786 14 QRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~ 35 (186)
-+|.|.|||+||.||+..|...
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl 230 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEA 230 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHH
Confidence 3799999999999999988654
No 185
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.48 E-value=0.025 Score=44.78 Aligned_cols=22 Identities=27% Similarity=0.276 Sum_probs=19.3
Q ss_pred CceEEeecChhHHHHHHHHHHh
Q 038786 14 QRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~ 35 (186)
-.|+|.|||+||.||+..|...
T Consensus 318 ~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHH
Confidence 3699999999999999998654
No 186
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=95.40 E-value=0.028 Score=39.79 Aligned_cols=23 Identities=22% Similarity=0.342 Sum_probs=18.9
Q ss_pred CceEEeecChhHHHHHHHHHHhc
Q 038786 14 QRVFLIGDSSGGNVVHEVAARAG 36 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~~ 36 (186)
.+|.++||||||.++-.+.....
T Consensus 78 ~~IsfIgHSLGGli~r~al~~~~ 100 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGLLH 100 (217)
T ss_pred ccceEEEecccHHHHHHHHHHhh
Confidence 58999999999999976665443
No 187
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=95.31 E-value=0.26 Score=39.83 Aligned_cols=50 Identities=22% Similarity=0.175 Sum_probs=42.1
Q ss_pred cccccccccC-CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCC
Q 038786 2 RENNWLTEHV-DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLR 57 (186)
Q Consensus 2 ~~l~~l~~~~-~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~ 57 (186)
+-++|+.++. .-.+|..+|-|.+|.-...+|... |+.+++++..++..+.
T Consensus 111 D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~------pPaLkai~p~~~~~D~ 161 (563)
T COG2936 111 DTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQ------PPALKAIAPTEGLVDR 161 (563)
T ss_pred HHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcC------Cchheeeccccccccc
Confidence 5678998876 556899999999999999999866 7789999998887763
No 188
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=95.26 E-value=0.028 Score=38.79 Aligned_cols=39 Identities=31% Similarity=0.411 Sum_probs=29.6
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHP 53 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p 53 (186)
...+++++|||+||.++..++.+.... +..+.+++++.+
T Consensus 62 ~~~~~~l~g~s~Gg~~a~~~a~~l~~~---~~~~~~l~~~~~ 100 (212)
T smart00824 62 GGRPFVLVGHSSGGLLAHAVAARLEAR---GIPPAAVVLLDT 100 (212)
T ss_pred CCCCeEEEEECHHHHHHHHHHHHHHhC---CCCCcEEEEEcc
Confidence 356799999999999999999876543 235777776654
No 189
>PLN02324 triacylglycerol lipase
Probab=95.23 E-value=0.016 Score=44.77 Aligned_cols=21 Identities=24% Similarity=0.196 Sum_probs=19.0
Q ss_pred ceEEeecChhHHHHHHHHHHh
Q 038786 15 RVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 15 ~i~l~G~S~GG~la~~~a~~~ 35 (186)
+|++.|||+||.||+..|...
T Consensus 216 sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred eEEEecCcHHHHHHHHHHHHH
Confidence 699999999999999998754
No 190
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=95.18 E-value=0.021 Score=43.26 Aligned_cols=43 Identities=26% Similarity=0.244 Sum_probs=34.3
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQ 58 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~ 58 (186)
+.+++.++||||||.++..++..... +..++.++.+++.-...
T Consensus 125 ga~~v~LigHS~GG~~~ry~~~~~~~----~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 125 GAKKVNLIGHSMGGLDSRYYLGVLGG----ANRVASVVTLGTPHHGT 167 (336)
T ss_pred CCCceEEEeecccchhhHHHHhhcCc----cceEEEEEEeccCCCCc
Confidence 67899999999999999988877732 25789999888764433
No 191
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=95.11 E-value=0.032 Score=42.29 Aligned_cols=31 Identities=19% Similarity=0.212 Sum_probs=23.9
Q ss_pred ccCCCCceEEeecChhHHHHHHHHHHhccCC
Q 038786 9 EHVDFQRVFLIGDSSGGNVVHEVAARAGQAD 39 (186)
Q Consensus 9 ~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~ 39 (186)
+....-+|++.|||+||.+|...|......+
T Consensus 166 ~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~ 196 (336)
T KOG4569|consen 166 ELYPNYSIWVTGHSLGGALASLAALDLVKNG 196 (336)
T ss_pred HhcCCcEEEEecCChHHHHHHHHHHHHHHcC
Confidence 3334458999999999999999998764433
No 192
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=95.08 E-value=0.03 Score=40.11 Aligned_cols=133 Identities=20% Similarity=0.229 Sum_probs=65.1
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccC----------C----
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELEN----------P---- 68 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~----------~---- 68 (186)
+++||. ..+.+++.|+--|.-|-+|..++.+. .+.-+|+.-++.+........... .
T Consensus 91 V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i--------~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dld 161 (294)
T PF02273_consen 91 VIDWLA-TRGIRRIGLIAASLSARIAYEVAADI--------NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDLD 161 (294)
T ss_dssp HHHHHH-HTT---EEEEEETTHHHHHHHHTTTS----------SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEEE
T ss_pred HHHHHH-hcCCCcchhhhhhhhHHHHHHHhhcc--------CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCccc
Confidence 568888 44588899999999999999999843 456666666777654321111100 0
Q ss_pred -CCCCC-cHHHHHHHHHhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCEEEEeeCcccccccHHHHHHHHHH-CCCceEE
Q 038786 69 -QSPLL-TLDMVDKFLSFALPLNSDKGHPYTCPMGPAGPPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKK-AGKDVEL 145 (186)
Q Consensus 69 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~-~~~~~~~ 145 (186)
.+.-+ .......+++.-. +..-+ ....++...+ |++.+++++|.-++.. +..+.+.. ....+++
T Consensus 162 feGh~l~~~vFv~dc~e~~w-------~~l~S----T~~~~k~l~i-P~iaF~A~~D~WV~q~-eV~~~~~~~~s~~~kl 228 (294)
T PF02273_consen 162 FEGHNLGAEVFVTDCFEHGW-------DDLDS----TINDMKRLSI-PFIAFTANDDDWVKQS-EVEELLDNINSNKCKL 228 (294)
T ss_dssp ETTEEEEHHHHHHHHHHTT--------SSHHH----HHHHHTT--S--EEEEEETT-TTS-HH-HHHHHHTT-TT--EEE
T ss_pred ccccccchHHHHHHHHHcCC-------ccchh----HHHHHhhCCC-CEEEEEeCCCccccHH-HHHHHHHhcCCCceeE
Confidence 00001 1223333333110 00000 0112333456 9999999999887543 33444443 3457899
Q ss_pred EEeCCCCccccc
Q 038786 146 LVSPGMGHSFYL 157 (186)
Q Consensus 146 ~~~~~~~H~~~~ 157 (186)
..++|..|....
T Consensus 229 ysl~Gs~HdL~e 240 (294)
T PF02273_consen 229 YSLPGSSHDLGE 240 (294)
T ss_dssp EEETT-SS-TTS
T ss_pred EEecCccchhhh
Confidence 999999999875
No 193
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=95.01 E-value=0.04 Score=46.18 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=43.2
Q ss_pred CCCCEEEEeeCc-------ccccccH---------HHHHHHHHHCCCc---------eEEEEeCCCCccccccccccCCC
Q 038786 111 KLPPFLLCVAGN-------DLIKDTE---------MEYYEAMKKAGKD---------VELLVSPGMGHSFYLDKIAVDMD 165 (186)
Q Consensus 111 ~~pP~li~~g~~-------D~~~~~~---------~~~~~~l~~~~~~---------~~~~~~~~~~H~~~~~~~~~~~~ 165 (186)
.. |+|++.-.. |.++|.. +-+++.|--.... ..++.|-.++|.....+... .
T Consensus 696 ~~-Pv~l~evvGdg~~~~~D~viPN~v~~~PlaGTePL~~~LgL~~~~~~~~~~t~~~~~v~f~~g~HsS~~~p~~~--~ 772 (792)
T TIGR03502 696 GT-PVLMIEVVGDGATNKPDQVIPNNVANLPLAGTEPLAKLLGLTGVSATQASATAVSGFVRFNKGHHSSFVDPAPS--A 772 (792)
T ss_pred CC-CeEEEEEecCCccCCCCCcCCCCCCCCCCcCcHHHHHhcCCccccCCCCCCCcccceEEeccccccCccCCCCC--c
Confidence 34 888877666 7777632 4566655332221 23666777889888754332 1
Q ss_pred cchhHHHHHHHHHHHHHhh
Q 038786 166 PNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 166 ~~~~~~~~~~~~~i~~fl~ 184 (186)
.......-|+...+..|+.
T Consensus 773 ~~~~~~t~eMq~q~a~f~~ 791 (792)
T TIGR03502 773 QADLAATVEMQTQVADFLA 791 (792)
T ss_pred ccchhhHHHHHHHHHHHhh
Confidence 1123556788889999975
No 194
>PLN02719 triacylglycerol lipase
Probab=94.97 E-value=0.02 Score=45.21 Aligned_cols=22 Identities=23% Similarity=0.282 Sum_probs=19.7
Q ss_pred ceEEeecChhHHHHHHHHHHhc
Q 038786 15 RVFLIGDSSGGNVVHEVAARAG 36 (186)
Q Consensus 15 ~i~l~G~S~GG~la~~~a~~~~ 36 (186)
+|++.|||+||.||+..|....
T Consensus 299 sItVTGHSLGGALAtLaA~Dl~ 320 (518)
T PLN02719 299 SITVTGHSLGGALAVLSAYDVA 320 (518)
T ss_pred eEEEecCcHHHHHHHHHHHHHH
Confidence 7999999999999999987654
No 195
>PLN02753 triacylglycerol lipase
Probab=94.94 E-value=0.021 Score=45.27 Aligned_cols=23 Identities=22% Similarity=0.231 Sum_probs=20.2
Q ss_pred CceEEeecChhHHHHHHHHHHhc
Q 038786 14 QRVFLIGDSSGGNVVHEVAARAG 36 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~~ 36 (186)
-+|++.|||+||.||+..|....
T Consensus 312 ~sItVTGHSLGGALAtLaA~Dla 334 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYDIA 334 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHHHH
Confidence 48999999999999999997553
No 196
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=94.94 E-value=0.0068 Score=48.67 Aligned_cols=46 Identities=13% Similarity=0.092 Sum_probs=31.7
Q ss_pred CCCceEEeecChhHHHHHHHHHHhcc---------CCCCCCceeEEEecCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQ---------ADVSPLRVAGAIPIHPGFLR 57 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~---------~~~~p~~~~~~vl~~p~~~~ 57 (186)
+-++|+|+||||||.+++.++..... ..+.-..|++.|.++|.+..
T Consensus 211 ggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 211 GGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred CCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 45799999999999999998763210 00112347888888886543
No 197
>PLN02761 lipase class 3 family protein
Probab=94.85 E-value=0.023 Score=45.04 Aligned_cols=21 Identities=19% Similarity=0.211 Sum_probs=19.1
Q ss_pred ceEEeecChhHHHHHHHHHHh
Q 038786 15 RVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 15 ~i~l~G~S~GG~la~~~a~~~ 35 (186)
+|++.|||+||.||+..|...
T Consensus 295 sItVTGHSLGGALAtLaA~DI 315 (527)
T PLN02761 295 SITVTGHSLGASLALVSAYDI 315 (527)
T ss_pred eEEEeccchHHHHHHHHHHHH
Confidence 799999999999999998655
No 198
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=94.79 E-value=0.044 Score=43.44 Aligned_cols=48 Identities=19% Similarity=0.173 Sum_probs=36.2
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCC----CCCceeEEEecCCCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADV----SPLRVAGAIPIHPGFLRQE 59 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~----~p~~~~~~vl~~p~~~~~~ 59 (186)
...+++|+|||+||..+..+|.+..+... ....++|+++-+|+++...
T Consensus 169 ~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~ 220 (462)
T PTZ00472 169 RANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPYT 220 (462)
T ss_pred cCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChhh
Confidence 45799999999999999999877632211 1245899999999887643
No 199
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=94.70 E-value=1.1 Score=32.33 Aligned_cols=44 Identities=23% Similarity=0.129 Sum_probs=32.3
Q ss_pred CCCEEEEeeCcccccccHHHHHHHHHHCCC-ceEEEEeCCCCccccc
Q 038786 112 LPPFLLCVAGNDLIKDTEMEYYEAMKKAGK-DVELLVSPGMGHSFYL 157 (186)
Q Consensus 112 ~pP~li~~g~~D~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~H~~~~ 157 (186)
.+.++++-=++|.+ |++..+.+.|+.... -++....+ +.|..+.
T Consensus 163 ~~rnLLIkF~~D~i-Dqt~~L~~~L~~r~~~~~~~~~L~-G~HLTPl 207 (250)
T PF07082_consen 163 VRRNLLIKFNDDDI-DQTDELEQILQQRFPDMVSIQTLP-GNHLTPL 207 (250)
T ss_pred CccceEEEecCCCc-cchHHHHHHHhhhccccceEEeCC-CCCCCcC
Confidence 34678888888887 677888888876533 36677777 4788775
No 200
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=94.67 E-value=0.021 Score=42.83 Aligned_cols=32 Identities=25% Similarity=0.430 Sum_probs=25.4
Q ss_pred cccccccC---CCCceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHV---DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~---~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
++||+++. ++++|++-|||.||.+++..+...
T Consensus 202 v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 202 VRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 56787643 779999999999999998755443
No 201
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.27 E-value=0.086 Score=36.18 Aligned_cols=44 Identities=20% Similarity=0.198 Sum_probs=30.0
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGF 55 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~ 55 (186)
.-.+|+|+|+|.||.++..++....-......+|.+++++.-..
T Consensus 79 P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 79 PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 34599999999999999999877100000134788888876543
No 202
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=94.18 E-value=0.0068 Score=47.35 Aligned_cols=51 Identities=24% Similarity=0.277 Sum_probs=34.1
Q ss_pred cccccccccC-----CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 2 RENNWLTEHV-----DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 2 ~~l~~l~~~~-----~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
.|+.|+++++ |+++|.|.|.|+|+.-+.+-+..-..+ ..++..|+-|+.++
T Consensus 201 LAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~----glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 201 LALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSR----GLFHRAILQSGSLN 256 (601)
T ss_pred HHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCch----hhHHHHHhhcCCCC
Confidence 4789999996 999999999999997554444322211 13555555555544
No 203
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=94.07 E-value=0.45 Score=33.63 Aligned_cols=69 Identities=14% Similarity=0.101 Sum_probs=39.9
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCC----cccccCCCCCCCcHHHHHHHHHhcCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERS----KSELENPQSPLLTLDMVDKFLSFALP 87 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (186)
..++|.|+++|||=..|..+.... .++..+.+++-..+.+.. +..... .-.-++.+....|.+.+++
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~--------~~~~aiAINGT~~Pid~~~GIpp~iF~~-Tl~~l~ee~~~kF~rrmcg 125 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGI--------PFKRAIAINGTPYPIDDEYGIPPAIFAG-TLENLSEENLQKFNRRMCG 125 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccC--------CcceeEEEECCCCCcCCCCCCCHHHHHH-HHHhCCHHHHHHHHHHhcC
Confidence 567999999999999988876533 466667776644332211 111110 0111355666667776665
Q ss_pred CC
Q 038786 88 LN 89 (186)
Q Consensus 88 ~~ 89 (186)
..
T Consensus 126 ~~ 127 (213)
T PF04301_consen 126 DK 127 (213)
T ss_pred Cc
Confidence 44
No 204
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=93.99 E-value=0.031 Score=43.54 Aligned_cols=26 Identities=27% Similarity=0.208 Sum_probs=22.9
Q ss_pred CCCceEEeecChhHHHHHHHHHHhcc
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQ 37 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~ 37 (186)
+-++|+|++|||||.+.++++.....
T Consensus 180 G~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 180 GGKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred CCCceEEEecCCccHHHHHHHhcccc
Confidence 55899999999999999999987755
No 205
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=93.75 E-value=0.057 Score=39.57 Aligned_cols=24 Identities=29% Similarity=0.466 Sum_probs=21.4
Q ss_pred CCCceEEeecChhHHHHHHHHHHh
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
.-.+|.|.|||.||.+|..+..++
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CCceEEEeccccchHHHHHhcccc
Confidence 445899999999999999999877
No 206
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=93.75 E-value=0.057 Score=39.57 Aligned_cols=24 Identities=29% Similarity=0.466 Sum_probs=21.4
Q ss_pred CCCceEEeecChhHHHHHHHHHHh
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
.-.+|.|.|||.||.+|..+..++
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CCceEEEeccccchHHHHHhcccc
Confidence 445899999999999999999877
No 207
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=93.65 E-value=0.63 Score=36.86 Aligned_cols=53 Identities=15% Similarity=0.004 Sum_probs=41.3
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCCCCcccccCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQERSKSELENPQSPL 72 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~ 72 (186)
+.+.++|.|-|||-.=|+.++++. .+.++|+--|..+.-+.....+..+++.+
T Consensus 355 ~~~qLILSGlSMGTfgAlYYga~l--------~P~AIiVgKPL~NLGtiA~n~rL~RP~~F 407 (511)
T TIGR03712 355 DHDQLILSGLSMGTFGALYYGAKL--------SPHAIIVGKPLVNLGTIASRMRLDRPDEF 407 (511)
T ss_pred CHHHeeeccccccchhhhhhcccC--------CCceEEEcCcccchhhhhccccccCCCCC
Confidence 778999999999999999999977 68888888888876555444444444444
No 208
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=93.31 E-value=0.11 Score=46.37 Aligned_cols=38 Identities=26% Similarity=0.187 Sum_probs=30.6
Q ss_pred CceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCC
Q 038786 14 QRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPG 54 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~ 54 (186)
.+++++|||+||.+|..+|.+.... +..+..++++.+.
T Consensus 1133 ~p~~l~G~S~Gg~vA~e~A~~l~~~---~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1133 GPYHLLGYSLGGTLAQGIAARLRAR---GEEVAFLGLLDTW 1170 (1296)
T ss_pred CCEEEEEechhhHHHHHHHHHHHHc---CCceeEEEEecCC
Confidence 4899999999999999999876432 4578888877653
No 209
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.30 E-value=0.27 Score=39.23 Aligned_cols=62 Identities=19% Similarity=0.343 Sum_probs=47.2
Q ss_pred CEEEEeeCccccccc--HHHHHHHHHHC-CC-------ceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHh
Q 038786 114 PFLLCVAGNDLIKDT--EMEYYEAMKKA-GK-------DVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFM 183 (186)
Q Consensus 114 P~li~~g~~D~~~~~--~~~~~~~l~~~-~~-------~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 183 (186)
.+|+.||..|.+++. +..+.+++.+. +. -.++...||++|...-.. ...-..+..+.+|+
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g----------~~~~d~l~aL~~WV 424 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPG----------PDPFDALTALVDWV 424 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCC----------CCCCCHHHHHHHHH
Confidence 899999999988763 57777777653 22 368999999999997532 23447888999998
Q ss_pred hh
Q 038786 184 RK 185 (186)
Q Consensus 184 ~~ 185 (186)
++
T Consensus 425 E~ 426 (474)
T PF07519_consen 425 EN 426 (474)
T ss_pred hC
Confidence 75
No 210
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.29 E-value=0.97 Score=33.07 Aligned_cols=26 Identities=23% Similarity=0.438 Sum_probs=21.9
Q ss_pred cCCCCceEEeecChhHHHHHHHHHHh
Q 038786 10 HVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 10 ~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
..+..+..|+|-||||-+|..+...+
T Consensus 191 ~~g~g~~~~~g~Smgg~~a~~vgS~~ 216 (371)
T KOG1551|consen 191 ADGLGNLNLVGRSMGGDIANQVGSLH 216 (371)
T ss_pred ccCcccceeeeeecccHHHHhhcccC
Confidence 33678999999999999999888754
No 211
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=92.29 E-value=0.12 Score=40.58 Aligned_cols=40 Identities=18% Similarity=0.149 Sum_probs=29.5
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLR 57 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~ 57 (186)
+..+++++|-|-||.||+.+-.++ |..+.|.+..|+++..
T Consensus 111 ~~~pwI~~GgSY~G~Laaw~r~ky------P~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 111 PNSPWIVFGGSYGGALAAWFRLKY------PHLFDGAWASSAPVQA 150 (434)
T ss_dssp CC--EEEEEETHHHHHHHHHHHH-------TTT-SEEEEET--CCH
T ss_pred CCCCEEEECCcchhHHHHHHHhhC------CCeeEEEEeccceeee
Confidence 445899999999999999999999 7788888888776653
No 212
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=92.25 E-value=0.51 Score=32.73 Aligned_cols=67 Identities=18% Similarity=0.214 Sum_probs=47.2
Q ss_pred CCCCEEEEeeCcccccccHHH-HHHHHHHCCC--ceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 111 KLPPFLLCVAGNDLIKDTEME-YYEAMKKAGK--DVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 111 ~~pP~li~~g~~D~~~~~~~~-~~~~l~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
+.+++|-+-|+.|.+...++. .+..|-..-+ ....++.+|++|.-.+... .+.+++.-.|.+|+.++
T Consensus 133 ~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~---------rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 133 RRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGS---------RWREEIYPRIREFIRQH 202 (202)
T ss_pred ccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccch---------hhhhhhhHHHHHHHHhC
Confidence 344888899999988765543 3344433222 2456677899998877533 67889999999999875
No 213
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.58 E-value=0.49 Score=33.77 Aligned_cols=27 Identities=26% Similarity=0.240 Sum_probs=23.4
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQA 38 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~ 38 (186)
..++++|+|+|+|+.++...+.+....
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l~~~ 72 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRLAAD 72 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHhc
Confidence 457899999999999999999888653
No 214
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=91.05 E-value=0.65 Score=35.39 Aligned_cols=44 Identities=16% Similarity=0.094 Sum_probs=32.3
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
+..+|.|+|||+|+-+...++....+... ...|+.++++..+..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~-~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKA-FGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccc-cCeEeeEEEecCCCC
Confidence 55679999999999999888877654422 224788888765543
No 215
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=90.41 E-value=0.29 Score=33.56 Aligned_cols=35 Identities=26% Similarity=0.328 Sum_probs=26.0
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIH 52 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~ 52 (186)
...++.++|||.|..++...+... +..+..++++.
T Consensus 107 ~~~~~tv~GHSYGS~v~G~A~~~~------~~~vddvv~~G 141 (177)
T PF06259_consen 107 PDAHLTVVGHSYGSTVVGLAAQQG------GLRVDDVVLVG 141 (177)
T ss_pred CCCCEEEEEecchhHHHHHHhhhC------CCCcccEEEEC
Confidence 456999999999999998888762 23566666543
No 216
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=90.11 E-value=0.55 Score=36.47 Aligned_cols=47 Identities=17% Similarity=0.197 Sum_probs=35.2
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCC----CCCceeEEEecCCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADV----SPLRVAGAIPIHPGFLRQ 58 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~----~p~~~~~~vl~~p~~~~~ 58 (186)
..++++|.|.|.||.-+-.+|.+..+... ....++|+++.+|+++..
T Consensus 134 ~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 134 RSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDPR 184 (415)
T ss_dssp TTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBHH
T ss_pred cCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccccc
Confidence 55689999999999988888876543322 145799999999998753
No 217
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=89.61 E-value=0.27 Score=39.22 Aligned_cols=42 Identities=21% Similarity=0.235 Sum_probs=38.3
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQE 59 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~ 59 (186)
.+++-+-.|.|-||.-++..|+++ |+.+.|++.-+|..+...
T Consensus 113 ~p~~sY~~GcS~GGRqgl~~AQry------P~dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 113 APKYSYFSGCSTGGRQGLMAAQRY------PEDFDGILAGAPAINWTH 154 (474)
T ss_pred CCCceEEEEeCCCcchHHHHHHhC------hhhcCeEEeCCchHHHHH
Confidence 678899999999999999999999 889999999999987643
No 218
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=89.59 E-value=0.4 Score=27.75 Aligned_cols=32 Identities=22% Similarity=0.355 Sum_probs=24.3
Q ss_pred cccccccC---CCCceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHV---DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~---~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
++|++++. +++++-|+|-|.|=.+|+.+++.+
T Consensus 27 I~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 27 IEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 45555543 678999999999999999999877
No 219
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=89.34 E-value=0.3 Score=36.97 Aligned_cols=38 Identities=24% Similarity=0.086 Sum_probs=32.3
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
..+.|++.|+|-||.-++..|..+ | .++++|+-+.+-|
T Consensus 309 ~~edIilygWSIGGF~~~waAs~Y------P-dVkavvLDAtFDD 346 (517)
T KOG1553|consen 309 RQEDIILYGWSIGGFPVAWAASNY------P-DVKAVVLDATFDD 346 (517)
T ss_pred CccceEEEEeecCCchHHHHhhcC------C-CceEEEeecchhh
Confidence 678999999999999999999977 4 5999998776544
No 220
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=87.73 E-value=1.8 Score=34.47 Aligned_cols=60 Identities=17% Similarity=0.241 Sum_probs=44.5
Q ss_pred CEEEEeeCccccccc--HHHHHHHHHH-----------------CC---------C-----ceEEEEeCCCCcccccccc
Q 038786 114 PFLLCVAGNDLIKDT--EMEYYEAMKK-----------------AG---------K-----DVELLVSPGMGHSFYLDKI 160 (186)
Q Consensus 114 P~li~~g~~D~~~~~--~~~~~~~l~~-----------------~~---------~-----~~~~~~~~~~~H~~~~~~~ 160 (186)
++||.+|..|.+++. .+.+.+.|.= .+ . ..++..+.+++|..+.
T Consensus 366 kVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~--- 442 (462)
T PTZ00472 366 RVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPM--- 442 (462)
T ss_pred eEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChh---
Confidence 899999999988874 3555555530 01 1 3556667899999988
Q ss_pred ccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 161 AVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
++++.+.+.+.+|+..
T Consensus 443 ---------d~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 443 ---------DQPAVALTMINRFLRN 458 (462)
T ss_pred ---------hHHHHHHHHHHHHHcC
Confidence 7899999999999864
No 221
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=87.45 E-value=0.22 Score=38.48 Aligned_cols=50 Identities=14% Similarity=0.233 Sum_probs=34.1
Q ss_pred ccccccC--CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCCCC
Q 038786 5 NWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLRQE 59 (186)
Q Consensus 5 ~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~~~ 59 (186)
..|++.. ....|+++|-|-||.+|+.+=++++. -.+.++...+|++...+
T Consensus 156 ~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH-----iv~GAlAaSAPvl~f~d 207 (492)
T KOG2183|consen 156 TFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH-----IVLGALAASAPVLYFED 207 (492)
T ss_pred HHHhhccccccCcEEEecCchhhHHHHHHHhcChh-----hhhhhhhccCceEeecC
Confidence 3444443 45689999999999999999999832 12344555666665443
No 222
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=87.39 E-value=1.2 Score=32.82 Aligned_cols=38 Identities=21% Similarity=0.229 Sum_probs=27.9
Q ss_pred CceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 14 QRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
+-+.++|+|.||.++-.++++.++ ..++-+|.+++.-.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~-----~~V~nlISlggph~ 117 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCND-----PPVHNLISLGGPHM 117 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TS-----S-EEEEEEES--TT
T ss_pred cceeeeeeccccHHHHHHHHHCCC-----CCceeEEEecCccc
Confidence 469999999999999999999853 26888888876543
No 223
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=87.19 E-value=0.94 Score=35.22 Aligned_cols=60 Identities=17% Similarity=0.311 Sum_probs=41.5
Q ss_pred CCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHh
Q 038786 113 PPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFM 183 (186)
Q Consensus 113 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 183 (186)
+.+|+++|++|+-.-. .| .+.+...+....+.||++|+-...... + ++..++...|.+|-
T Consensus 352 ~rmlFVYG~nDPW~A~--~f--~l~~g~~ds~v~~~PggnHga~I~~L~----~---~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 352 PRMLFVYGENDPWSAE--PF--RLGKGKRDSYVFTAPGGNHGARIAGLP----E---AERAEATARLRRWA 411 (448)
T ss_pred CeEEEEeCCCCCcccC--cc--ccCCCCcceEEEEcCCCcccccccCCC----H---HHHHHHHHHHHHHc
Confidence 3799999999988432 22 223334567788889999998774432 1 56677888888874
No 224
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.76 E-value=2.5 Score=32.32 Aligned_cols=61 Identities=15% Similarity=0.150 Sum_probs=50.2
Q ss_pred CEEEEeeCcccccc--cHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 114 PFLLCVAGNDLIKD--TEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 114 P~li~~g~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
+.+-+++..|.+++ ....++...++.|..++...+.+..|.-+.. ..+......+.+|++.
T Consensus 227 ~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r-----------~~p~~y~~~~~~Fl~~ 289 (350)
T KOG2521|consen 227 NQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFR-----------SFPKTYLKKCSEFLRS 289 (350)
T ss_pred cceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeec-----------cCcHHHHHHHHHHHHh
Confidence 66777899998876 4578888888899999999999999998764 3478888899999875
No 225
>PLN02633 palmitoyl protein thioesterase family protein
Probab=86.46 E-value=1.1 Score=33.46 Aligned_cols=39 Identities=18% Similarity=0.116 Sum_probs=30.6
Q ss_pred CceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 14 QRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
+-+.++|+|.||.++-.++.+..+ ...++.+|.+++.-.
T Consensus 94 ~G~naIGfSQGGlflRa~ierc~~----~p~V~nlISlggph~ 132 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEFCDG----GPPVYNYISLAGPHA 132 (314)
T ss_pred CcEEEEEEccchHHHHHHHHHCCC----CCCcceEEEecCCCC
Confidence 459999999999999999999843 125888888766543
No 226
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=86.05 E-value=0.68 Score=34.20 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=26.4
Q ss_pred ccccccccC-CCCceEEeecChhHHHHHHHHHHhc
Q 038786 3 ENNWLTEHV-DFQRVFLIGDSSGGNVVHEVAARAG 36 (186)
Q Consensus 3 ~l~~l~~~~-~~~~i~l~G~S~GG~la~~~a~~~~ 36 (186)
++.+|.++. ..++|+|+|+|.|+..|-.++....
T Consensus 80 ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i~ 114 (277)
T PF09994_consen 80 AYRFLSKNYEPGDRIYLFGFSRGAYTARAFANMID 114 (277)
T ss_pred HHHHHHhccCCcceEEEEecCccHHHHHHHHHHHh
Confidence 455565554 5568999999999999999997553
No 227
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=85.71 E-value=0.35 Score=36.22 Aligned_cols=34 Identities=15% Similarity=0.126 Sum_probs=26.7
Q ss_pred ccccccccC-CCCceEEeecChhHHHHHHHHHHhc
Q 038786 3 ENNWLTEHV-DFQRVFLIGDSSGGNVVHEVAARAG 36 (186)
Q Consensus 3 ~l~~l~~~~-~~~~i~l~G~S~GG~la~~~a~~~~ 36 (186)
|..+|..+. .-++|++.|+|.|+.+|-.+|....
T Consensus 110 AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagmir 144 (423)
T COG3673 110 AYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGMIR 144 (423)
T ss_pred HHHHHHHhcCCCCeEEEeeccchhHHHHHHHHHHH
Confidence 445566665 5579999999999999999987553
No 228
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=85.48 E-value=0.76 Score=35.57 Aligned_cols=24 Identities=38% Similarity=0.434 Sum_probs=18.7
Q ss_pred CCCceEEeecChhHHHHHHHHHHh
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
+..++.|+|+|.|+-+--..-.+.
T Consensus 324 ~~~~~~liGySfGADvlP~~~n~L 347 (456)
T COG3946 324 GAKRVLLIGYSFGADVLPFAYNRL 347 (456)
T ss_pred CcceEEEEeecccchhhHHHHHhC
Confidence 788999999999998765554443
No 229
>PLN02606 palmitoyl-protein thioesterase
Probab=85.16 E-value=1.5 Score=32.79 Aligned_cols=40 Identities=13% Similarity=0.117 Sum_probs=31.2
Q ss_pred CceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCC
Q 038786 14 QRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLR 57 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~ 57 (186)
+-+.++|+|.||.++-.++++.++. ..++-+|.+.+.-..
T Consensus 95 ~G~naIGfSQGglflRa~ierc~~~----p~V~nlISlggph~G 134 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFCDNA----PPVINYVSLGGPHAG 134 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHCCCC----CCcceEEEecCCcCC
Confidence 4699999999999999999998431 258888888765443
No 230
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=84.49 E-value=1.6 Score=34.07 Aligned_cols=63 Identities=16% Similarity=0.295 Sum_probs=40.9
Q ss_pred CEEEEeeCcccccccH-HHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 114 PFLLCVAGNDLIKDTE-MEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 114 P~li~~g~~D~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
|++|+.|+-|.+.++. ..+.+.+...|..+-....||.++..... ..++.+.+.+.+++|+..
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~---------l~~D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWP---------LTQDSSRLHQAVLDYLAS 254 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT----------S-S-CCHHHHHHHHHHHH
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCC---------CCcCHHHHHHHHHHHHhc
Confidence 9999999999887654 34455678888888888889998875331 114567788899999864
No 231
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=84.11 E-value=1.4 Score=36.00 Aligned_cols=71 Identities=8% Similarity=0.091 Sum_probs=45.5
Q ss_pred CEEEEeeCccccccc---HHHHHHHHHH-CC--CceEEEEeCCCCcccccccc---ccCCCcchhHHHHHHHHHHHHHhh
Q 038786 114 PFLLCVAGNDLIKDT---EMEYYEAMKK-AG--KDVELLVSPGMGHSFYLDKI---AVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 114 P~li~~g~~D~~~~~---~~~~~~~l~~-~~--~~~~~~~~~~~~H~~~~~~~---~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
|++|+||..|.++|. ++.+....+. .+ -.+++.++.++.|.-.+... ...+-| .-....+.++.|..+|+
T Consensus 557 PaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~~pG~~~r~VP-lh~Y~~qALd~M~a~L~ 635 (690)
T PF10605_consen 557 PAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLDFPGFDTRFVP-LHPYFFQALDLMWAHLK 635 (690)
T ss_pred ceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhccCCCCCccccc-ccHHHHHHHHHHHHHhh
Confidence 999999999988874 4666666553 23 36888888999886543111 000001 11355677888888776
Q ss_pred h
Q 038786 185 K 185 (186)
Q Consensus 185 ~ 185 (186)
.
T Consensus 636 ~ 636 (690)
T PF10605_consen 636 S 636 (690)
T ss_pred c
Confidence 4
No 232
>PLN02209 serine carboxypeptidase
Probab=79.54 E-value=2.1 Score=33.89 Aligned_cols=47 Identities=17% Similarity=0.292 Sum_probs=33.8
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCC----CCCCceeEEEecCCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQAD----VSPLRVAGAIPIHPGFLRQ 58 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~----~~p~~~~~~vl~~p~~~~~ 58 (186)
..++++|.|.|.||.-+-.+|....+.. ...-.++|+++.+|+++..
T Consensus 165 ~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~ 215 (437)
T PLN02209 165 LSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIE 215 (437)
T ss_pred cCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChh
Confidence 4468999999999997777776553211 1134679999999988753
No 233
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.96 E-value=3.3 Score=29.39 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=29.5
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIH 52 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~ 52 (186)
.++.|+++.||.||.+.+.+..++++. +++.++.+--
T Consensus 188 ~~~sv~vvahsyGG~~t~~l~~~f~~d----~~v~aialTD 224 (297)
T KOG3967|consen 188 KAESVFVVAHSYGGSLTLDLVERFPDD----ESVFAIALTD 224 (297)
T ss_pred CcceEEEEEeccCChhHHHHHHhcCCc----cceEEEEeec
Confidence 678999999999999999999998542 4566655543
No 234
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=78.30 E-value=11 Score=21.94 Aligned_cols=62 Identities=10% Similarity=0.068 Sum_probs=41.0
Q ss_pred CEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 114 PFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 114 P~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
=++|+||-.|... .-..+++.|.+.|. .+..+.--+|+...-... ..+..+++++++..|++
T Consensus 18 ~v~i~HG~~eh~~-ry~~~a~~L~~~G~--~V~~~D~rGhG~S~g~rg------~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 18 VVVIVHGFGEHSG-RYAHLAEFLAEQGY--AVFAYDHRGHGRSEGKRG------HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEEeCCcHHHHH-HHHHHHHHHHhCCC--EEEEECCCcCCCCCCccc------ccCCHHHHHHHHHHHhC
Confidence 3788899887653 34678888888775 444556566766542111 12567889999988874
No 235
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=77.56 E-value=2.9 Score=33.06 Aligned_cols=47 Identities=19% Similarity=0.332 Sum_probs=34.6
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCC----CCCCceeEEEecCCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQAD----VSPLRVAGAIPIHPGFLRQ 58 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~----~~p~~~~~~vl~~p~~~~~ 58 (186)
..++++|.|.|.||.-+-.+|.+..+.. ..+-.++|+++-+|+++..
T Consensus 163 ~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~ 213 (433)
T PLN03016 163 FSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 213 (433)
T ss_pred cCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCch
Confidence 4568999999999998888776653221 1234689999999987654
No 236
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=76.89 E-value=1.9 Score=31.01 Aligned_cols=32 Identities=22% Similarity=0.048 Sum_probs=24.0
Q ss_pred cccccccC-CCCceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHV-DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~-~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
+++|.++. -++.-.+.|-|+|+.++..++...
T Consensus 18 l~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 18 LSLLIEAGVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 45666664 223458999999999999999754
No 237
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.56 E-value=2.5 Score=34.50 Aligned_cols=24 Identities=29% Similarity=0.425 Sum_probs=20.2
Q ss_pred CCCceEEeecChhHHHHHHHHHHh
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
+-..|+-+||||||.++=.++...
T Consensus 524 ~~RPivwI~HSmGGLl~K~lLlda 547 (697)
T KOG2029|consen 524 DDRPIVWIGHSMGGLLAKKLLLDA 547 (697)
T ss_pred CCCceEEEecccchHHHHHHHHHH
Confidence 567899999999999888877654
No 238
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=75.93 E-value=7.7 Score=30.92 Aligned_cols=55 Identities=13% Similarity=0.183 Sum_probs=39.0
Q ss_pred ccccccC--CCCceEEeecChhHHHHHHHHHHhccCC----CCCCceeEEEecCCCCCCCC
Q 038786 5 NWLTEHV--DFQRVFLIGDSSGGNVVHEVAARAGQAD----VSPLRVAGAIPIHPGFLRQE 59 (186)
Q Consensus 5 ~~l~~~~--~~~~i~l~G~S~GG~la~~~a~~~~~~~----~~p~~~~~~vl~~p~~~~~~ 59 (186)
+|+.++. .-+.++|.|.|-+|+.+-.+|...-+.+ ....-++|+++=+|.++...
T Consensus 157 ~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~ 217 (454)
T KOG1282|consen 157 KWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEI 217 (454)
T ss_pred HHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCccc
Confidence 4554443 5679999999999988877776654322 12346899999999887543
No 239
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=74.30 E-value=2.2 Score=28.90 Aligned_cols=32 Identities=22% Similarity=0.104 Sum_probs=24.3
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
++++|.++. ...-.+.|-|+|+.++..++...
T Consensus 16 vl~aL~e~g-i~~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 16 VAKALRERG-PLIDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHcC-CCCCEEEEECHHHHHHHHHHcCC
Confidence 345565554 44668999999999999999754
No 240
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=73.97 E-value=6.6 Score=29.68 Aligned_cols=47 Identities=19% Similarity=0.332 Sum_probs=35.0
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCC----CCCCceeEEEecCCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQAD----VSPLRVAGAIPIHPGFLRQ 58 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~----~~p~~~~~~vl~~p~~~~~ 58 (186)
..++++|.|.|-||.-+-.+|....+.. ..+-.++|+++-+|+++..
T Consensus 49 ~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 49 FSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 99 (319)
T ss_pred ccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCcc
Confidence 5678999999999998888877653211 1234689999999988764
No 241
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=73.97 E-value=2.7 Score=31.26 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=27.3
Q ss_pred cccccccC----CCCceEEeecChhHHHHHHHHHHhc
Q 038786 4 NNWLTEHV----DFQRVFLIGDSSGGNVVHEVAARAG 36 (186)
Q Consensus 4 l~~l~~~~----~~~~i~l~G~S~GG~la~~~a~~~~ 36 (186)
++|++..+ +++||.|+|.|.|=++|+.+++.++
T Consensus 28 I~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 28 IDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred HHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhC
Confidence 34555544 7899999999999999999999885
No 242
>PRK10279 hypothetical protein; Provisional
Probab=71.50 E-value=2.7 Score=31.45 Aligned_cols=30 Identities=23% Similarity=0.062 Sum_probs=22.9
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHH
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAAR 34 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~ 34 (186)
+++|.++. ..--.++|-|+|+.++..+|..
T Consensus 24 L~aL~E~g-i~~d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 24 INALKKVG-IEIDIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred HHHHHHcC-CCcCEEEEEcHHHHHHHHHHcC
Confidence 44555543 5566899999999999999864
No 243
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=70.98 E-value=14 Score=27.94 Aligned_cols=59 Identities=8% Similarity=0.125 Sum_probs=41.8
Q ss_pred CEEEEeeCccccccc--HHHHHHHHHHCC--------------------Cc-eEEEEeCCCCccccccccccCCCcchhH
Q 038786 114 PFLLCVAGNDLIKDT--EMEYYEAMKKAG--------------------KD-VELLVSPGMGHSFYLDKIAVDMDPNTAA 170 (186)
Q Consensus 114 P~li~~g~~D~~~~~--~~~~~~~l~~~~--------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 170 (186)
++||..|..|.+++. .+...+.|.-.+ .+ .++..+-++||... .
T Consensus 235 ~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-------------~ 301 (319)
T PLN02213 235 RSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-------------Y 301 (319)
T ss_pred eEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-------------c
Confidence 899999999988874 466666664111 12 45566668999873 3
Q ss_pred HHHHHHHHHHHHhhh
Q 038786 171 QTCGLFQGIAEFMRK 185 (186)
Q Consensus 171 ~~~~~~~~i~~fl~~ 185 (186)
+++..++.+.+|++.
T Consensus 302 qP~~al~m~~~fi~~ 316 (319)
T PLN02213 302 RPNETFIMFQRWISG 316 (319)
T ss_pred CHHHHHHHHHHHHcC
Confidence 478888889999864
No 244
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=69.86 E-value=23 Score=21.83 Aligned_cols=49 Identities=10% Similarity=0.219 Sum_probs=30.6
Q ss_pred cHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 128 TEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 128 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
....|...|...|.++++....++....+... .++.+++-..+..|+.+
T Consensus 12 ~AqaF~DYl~sqgI~~~i~~~~~~~~~lwl~d---------e~~~~~a~~el~~Fl~n 60 (101)
T PF12122_consen 12 AAQAFIDYLASQGIELQIEPEGQGQFALWLHD---------EEHLEQAEQELEEFLQN 60 (101)
T ss_dssp HHHHHHHHHHHTT--EEEE-SSSE--EEEES----------GGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCeEEEEECCCCceEEEEeC---------HHHHHHHHHHHHHHHHC
Confidence 56899999999998888877554423333321 15677888888888763
No 245
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=68.81 E-value=4.2 Score=30.63 Aligned_cols=18 Identities=22% Similarity=0.466 Sum_probs=16.2
Q ss_pred EEeecChhHHHHHHHHHH
Q 038786 17 FLIGDSSGGNVVHEVAAR 34 (186)
Q Consensus 17 ~l~G~S~GG~la~~~a~~ 34 (186)
.+.|-|+||.+|+.++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 689999999999999863
No 246
>PLN02209 serine carboxypeptidase
Probab=68.69 E-value=18 Score=28.81 Aligned_cols=59 Identities=8% Similarity=0.069 Sum_probs=42.4
Q ss_pred CEEEEeeCccccccc--HHHHHHHHHHCC--------------------Cc-eEEEEeCCCCccccccccccCCCcchhH
Q 038786 114 PFLLCVAGNDLIKDT--EMEYYEAMKKAG--------------------KD-VELLVSPGMGHSFYLDKIAVDMDPNTAA 170 (186)
Q Consensus 114 P~li~~g~~D~~~~~--~~~~~~~l~~~~--------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 170 (186)
++||..|..|.+++. .+...+.|.-.+ .. .++..+.+++|... .
T Consensus 353 rVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-------------~ 419 (437)
T PLN02209 353 RSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-------------Y 419 (437)
T ss_pred eEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-------------c
Confidence 899999999988874 466666665111 12 45666778999873 3
Q ss_pred HHHHHHHHHHHHhhh
Q 038786 171 QTCGLFQGIAEFMRK 185 (186)
Q Consensus 171 ~~~~~~~~i~~fl~~ 185 (186)
+++.+++.+.+|+..
T Consensus 420 qP~~al~m~~~fi~~ 434 (437)
T PLN02209 420 LPEESSIMFQRWISG 434 (437)
T ss_pred CHHHHHHHHHHHHcC
Confidence 588888889999864
No 247
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=67.48 E-value=18 Score=28.78 Aligned_cols=59 Identities=8% Similarity=0.125 Sum_probs=42.0
Q ss_pred CEEEEeeCccccccc--HHHHHHHHHHCC--------------------Cc-eEEEEeCCCCccccccccccCCCcchhH
Q 038786 114 PFLLCVAGNDLIKDT--EMEYYEAMKKAG--------------------KD-VELLVSPGMGHSFYLDKIAVDMDPNTAA 170 (186)
Q Consensus 114 P~li~~g~~D~~~~~--~~~~~~~l~~~~--------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 170 (186)
++||..|..|.+++. .+...+.|.-.+ .+ .++..+-+++|... .
T Consensus 349 rVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-------------~ 415 (433)
T PLN03016 349 RSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-------------Y 415 (433)
T ss_pred eEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-------------C
Confidence 899999999988874 355555554111 12 45666778999884 2
Q ss_pred HHHHHHHHHHHHhhh
Q 038786 171 QTCGLFQGIAEFMRK 185 (186)
Q Consensus 171 ~~~~~~~~i~~fl~~ 185 (186)
+++.+++.+.+|++.
T Consensus 416 qP~~al~m~~~Fi~~ 430 (433)
T PLN03016 416 RPNETFIMFQRWISG 430 (433)
T ss_pred CHHHHHHHHHHHHcC
Confidence 478888999999864
No 248
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=66.79 E-value=4.5 Score=29.80 Aligned_cols=22 Identities=23% Similarity=0.223 Sum_probs=18.6
Q ss_pred CCCceEEeecChhHHHHHHHHH
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAA 33 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~ 33 (186)
+...-.++|||+|=..|+.++.
T Consensus 81 ~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 81 GLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCCCCEEeecCHHHHHHHHHhC
Confidence 3778899999999988888774
No 249
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=66.28 E-value=6.5 Score=31.32 Aligned_cols=60 Identities=12% Similarity=0.199 Sum_probs=42.0
Q ss_pred CEEEEeeCccccccc--HHHHHHHHHHCCC---------------------ceEEEEeCCCCccccccccccCCCcchhH
Q 038786 114 PFLLCVAGNDLIKDT--EMEYYEAMKKAGK---------------------DVELLVSPGMGHSFYLDKIAVDMDPNTAA 170 (186)
Q Consensus 114 P~li~~g~~D~~~~~--~~~~~~~l~~~~~---------------------~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 170 (186)
++||..|+.|.+++- .+...+.|..... ...+..+.|++|.... .
T Consensus 365 rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~------------~ 432 (454)
T KOG1282|consen 365 RVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPY------------D 432 (454)
T ss_pred EEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCC------------C
Confidence 899999999988873 3555455442110 1345667799998887 4
Q ss_pred HHHHHHHHHHHHhhh
Q 038786 171 QTCGLFQGIAEFMRK 185 (186)
Q Consensus 171 ~~~~~~~~i~~fl~~ 185 (186)
+++..+..+..|+..
T Consensus 433 ~p~~al~m~~~fl~g 447 (454)
T KOG1282|consen 433 KPESALIMFQRFLNG 447 (454)
T ss_pred CcHHHHHHHHHHHcC
Confidence 577888888888864
No 250
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=65.02 E-value=5.3 Score=27.50 Aligned_cols=31 Identities=19% Similarity=0.070 Sum_probs=22.6
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
++.|.++. ...=.+.|-|+||.+|+.++...
T Consensus 18 l~~L~e~~-~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 18 LKALEEAG-ILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHcC-CCcceEEEECHHHHHHHHHHcCC
Confidence 44454443 34468999999999999999744
No 251
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=63.50 E-value=13 Score=27.45 Aligned_cols=37 Identities=22% Similarity=0.187 Sum_probs=28.4
Q ss_pred CCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCC
Q 038786 13 FQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPG 54 (186)
Q Consensus 13 ~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~ 54 (186)
.+-+.++|.|.||.++-+++..-.+ ..++..|.+++.
T Consensus 91 sqGynivg~SQGglv~Raliq~cd~-----ppV~n~ISL~gP 127 (296)
T KOG2541|consen 91 SQGYNIVGYSQGGLVARALIQFCDN-----PPVKNFISLGGP 127 (296)
T ss_pred cCceEEEEEccccHHHHHHHHhCCC-----CCcceeEeccCC
Confidence 4578999999999999999987743 256677766543
No 252
>PLN03006 carbonate dehydratase
Probab=63.23 E-value=4.4 Score=30.29 Aligned_cols=30 Identities=13% Similarity=0.337 Sum_probs=24.4
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHH
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVA 32 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a 32 (186)
+++|-..+++.+.|+|+|||-=|.+...+.
T Consensus 161 SLEYAV~~L~V~~IVV~GHs~CGaV~Aal~ 190 (301)
T PLN03006 161 ALEFSVNTLNVENILVIGHSRCGGIQALMK 190 (301)
T ss_pred hHHHHHHHhCCCEEEEecCCCchHHHHHhh
Confidence 567777778999999999999888776553
No 253
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=62.63 E-value=6 Score=28.17 Aligned_cols=31 Identities=23% Similarity=0.078 Sum_probs=22.6
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
++.|.++. .+.-.+.|-|+|+.+|+.++...
T Consensus 19 L~aL~e~g-i~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 19 LAALLEMG-LEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHcC-CCceEEEEeCHHHHHHHHHHcCC
Confidence 44555543 44457999999999999999643
No 254
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=62.00 E-value=5.7 Score=29.90 Aligned_cols=30 Identities=20% Similarity=0.057 Sum_probs=22.5
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHH
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAAR 34 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~ 34 (186)
+++|.++ +..-=.++|-|+|+.++..++..
T Consensus 34 L~aLee~-gi~~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 34 IKALEEA-GIPVDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHc-CCCCCEEEEECHHHHHHHHHHcC
Confidence 4445444 35555899999999999999975
No 255
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=61.42 E-value=6 Score=28.71 Aligned_cols=32 Identities=13% Similarity=0.034 Sum_probs=22.0
Q ss_pred cccccccC-CCCceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHV-DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~-~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
++.|.++. ....-.+.|-|+|+.+|..++...
T Consensus 19 l~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~ 51 (245)
T cd07218 19 AVCLKKYAPHLLLNKISGASAGALAACCLLCDL 51 (245)
T ss_pred HHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCC
Confidence 45566664 111223999999999999998753
No 256
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=60.59 E-value=5.7 Score=27.37 Aligned_cols=30 Identities=10% Similarity=0.252 Sum_probs=23.4
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHH
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVA 32 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a 32 (186)
+++|-..+++.+.|+|+|||-=|.+...+.
T Consensus 70 sleyAv~~L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 70 VLQYAVDVLKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred hHHHHHHhcCCCEEEEecCCCchHHHHHHc
Confidence 455666677999999999999888776654
No 257
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=60.48 E-value=6.3 Score=29.22 Aligned_cols=22 Identities=23% Similarity=0.058 Sum_probs=18.5
Q ss_pred CCCceEEeecChhHHHHHHHHH
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAA 33 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~ 33 (186)
+.....++|||+|=..|+.++.
T Consensus 74 g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 74 LPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred CCCCcEEeecCHHHHHHHHHhC
Confidence 5678899999999988887764
No 258
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=59.57 E-value=7.9 Score=28.65 Aligned_cols=23 Identities=22% Similarity=0.161 Sum_probs=18.8
Q ss_pred CCCCceEEeecChhHHHHHHHHH
Q 038786 11 VDFQRVFLIGDSSGGNVVHEVAA 33 (186)
Q Consensus 11 ~~~~~i~l~G~S~GG~la~~~a~ 33 (186)
.+...-+++|||.|-..|+.++.
T Consensus 79 ~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 79 WGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred cCCcccEEEecCHHHHHHHHHhC
Confidence 35677799999999988887764
No 259
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=58.14 E-value=9.3 Score=25.70 Aligned_cols=23 Identities=17% Similarity=0.013 Sum_probs=17.5
Q ss_pred CCceEEeecChhHHHHHHHHHHh
Q 038786 13 FQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 13 ~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
..--.+.|-|.||.+|+.++...
T Consensus 26 ~~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 26 ERFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp CT-SEEEEECCHHHHHHHHHTC-
T ss_pred CCccEEEEcChhhhhHHHHHhCC
Confidence 33447999999999998888754
No 260
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=58.02 E-value=8.7 Score=28.81 Aligned_cols=17 Identities=18% Similarity=0.366 Sum_probs=15.4
Q ss_pred EEeecChhHHHHHHHHH
Q 038786 17 FLIGDSSGGNVVHEVAA 33 (186)
Q Consensus 17 ~l~G~S~GG~la~~~a~ 33 (186)
.++|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58999999999999985
No 261
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=57.19 E-value=9.9 Score=30.52 Aligned_cols=42 Identities=19% Similarity=0.363 Sum_probs=28.8
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
..++.+|+|.|-||+=+..+|....+.. ...++.+++++++.
T Consensus 196 ~~~~~~L~GESYgg~yip~~A~~L~~~~---~~~~~~~nlssvli 237 (498)
T COG2939 196 LLSPKFLAGESYGGHYIPVFAHELLEDN---IALNGNVNLSSVLI 237 (498)
T ss_pred hcCceeEeeccccchhhHHHHHHHHHhc---cccCCceEeeeeee
Confidence 3468999999999998888887775432 13455555555444
No 262
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=57.14 E-value=9.3 Score=25.94 Aligned_cols=31 Identities=26% Similarity=0.096 Sum_probs=22.7
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
++.|.++. ..-=.+.|-|+|+.+|+.++...
T Consensus 19 l~~L~e~g-~~~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 19 LRALEEEG-IEIDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred HHHHHHCC-CCeeEEEEeCHHHHHHHHHHcCC
Confidence 44554443 44458999999999999998754
No 263
>PLN00416 carbonate dehydratase
Probab=57.09 E-value=6.6 Score=28.75 Aligned_cols=30 Identities=17% Similarity=0.392 Sum_probs=24.4
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHH
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVA 32 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a 32 (186)
+++|-..+++.+.|+|+|||-=|.+...+.
T Consensus 129 sLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 129 AVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred HHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 466777777999999999999888877664
No 264
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=56.78 E-value=9.4 Score=26.97 Aligned_cols=31 Identities=19% Similarity=0.068 Sum_probs=22.7
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
++.|.+.. ..-=.+.|-|+|+.+|+.++...
T Consensus 17 l~aL~e~g-~~~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 17 LKALAEAG-IEPDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHHHcC-CCCCEEEEECHHHHHHHHHHcCC
Confidence 34454443 34458999999999999999854
No 265
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=56.67 E-value=4.5 Score=30.42 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=26.7
Q ss_pred CCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccc
Q 038786 113 PPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 113 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 157 (186)
|-.+++.|+.|.+ ..+.+.+++.+...+......+.|....
T Consensus 156 ~~q~visG~~~~l----~~~~~~l~~~~~~~~~l~v~~afHs~~m 196 (318)
T PF00698_consen 156 PRQVVISGEREAL----EALVERLKAEGIKAKRLPVSYAFHSPLM 196 (318)
T ss_dssp TTEEEEEEEHHHH----HHHHHHHHHTTSEEEEESSSSETTSGGG
T ss_pred ccccccCCCHHHH----HHHHHHhhccceeEEEeeeeccccCchh
Confidence 4567888888766 5678888888755555555555554443
No 266
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=56.39 E-value=10 Score=27.70 Aligned_cols=31 Identities=16% Similarity=0.067 Sum_probs=22.3
Q ss_pred cccccccCCCC-ceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~~~~-~i~l~G~S~GG~la~~~a~~~ 35 (186)
+++|.++. .. -=.+.|-|+|+.+++.++...
T Consensus 17 l~al~e~~-~~~fd~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 17 LDAFLEAG-IRPFDLVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred HHHHHHcC-CCCCCEEEEECHHHHhHHHHHhCC
Confidence 44555554 22 238999999999999998764
No 267
>KOG4150 consensus Predicted ATP-dependent RNA helicase [RNA processing and modification]
Probab=56.17 E-value=63 Score=26.99 Aligned_cols=68 Identities=13% Similarity=0.177 Sum_probs=45.1
Q ss_pred CCEEEEeeCcccccc---cHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 113 PPFLLCVAGNDLIKD---TEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 113 pP~li~~g~~D~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
-|++|..|.+|.... ...+|+++-.+...+.++..|..+|-.+.- ..-+...+..+++++..++-+.+
T Consensus 899 ~P~FI~~~~~dI~TECKApEKEfaErqt~R~RPaRLIFYD~~G~~~Ga-----GLC~KAfEH~Dd~Ie~~lrRIE~ 969 (1034)
T KOG4150|consen 899 VPTFITCNYSDIATECKAPEKEFAERQTQRYRPARLIFYDPGGTGIGA-----GLCPKAFEHLDDAIEDLLRRIEK 969 (1034)
T ss_pred cceEEecCchhhcccCCCchHHHHHhhhhccCcceEEEEcCCCCcccc-----cccHHHHHHHHHHHHHHHHHHhc
Confidence 399999999996543 347888877777788999999987766543 11112225556666665555443
No 268
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=55.88 E-value=7 Score=27.19 Aligned_cols=30 Identities=10% Similarity=0.254 Sum_probs=23.8
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHH
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVA 32 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a 32 (186)
+++|-..+++.+.|+|+|||-=|.+.+.+.
T Consensus 76 sleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 76 AIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 456666777899999999999888777664
No 269
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=55.87 E-value=9.9 Score=29.16 Aligned_cols=18 Identities=28% Similarity=0.399 Sum_probs=16.3
Q ss_pred EEeecChhHHHHHHHHHH
Q 038786 17 FLIGDSSGGNVVHEVAAR 34 (186)
Q Consensus 17 ~l~G~S~GG~la~~~a~~ 34 (186)
.+.|-|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 789999999999999863
No 270
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=55.83 E-value=11 Score=25.49 Aligned_cols=31 Identities=26% Similarity=0.059 Sum_probs=22.5
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
+++|.++. ..-=.+.|-|+|+.+|+.++...
T Consensus 19 l~~L~~~~-~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 19 LKALEEAG-IPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHcC-CCeeEEEEECHHHHHHHHHHcCC
Confidence 45555543 33448999999999999998643
No 271
>PLN03019 carbonic anhydrase
Probab=55.16 E-value=7.6 Score=29.43 Aligned_cols=30 Identities=17% Similarity=0.366 Sum_probs=24.2
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHH
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVA 32 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a 32 (186)
+++|-..+++.+.|+|+|||-=|.+...+.
T Consensus 204 SIEYAV~~L~V~~IVV~GHs~CGaVkAal~ 233 (330)
T PLN03019 204 AIEYAVLHLKVENIVVIGHSACGGIKGLMS 233 (330)
T ss_pred hHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 466677777999999999999888777654
No 272
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=55.04 E-value=5.4 Score=25.35 Aligned_cols=26 Identities=15% Similarity=0.328 Sum_probs=19.7
Q ss_pred cccccccCCCCceEEeecChhHHHHH
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVH 29 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~ 29 (186)
+.|.....+.+.|+|+|||--|.+..
T Consensus 49 l~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 49 LEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred HHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 44555666899999999988777653
No 273
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=55.01 E-value=10 Score=27.98 Aligned_cols=30 Identities=23% Similarity=0.006 Sum_probs=22.0
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHH
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAAR 34 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~ 34 (186)
++.|.++ +..-=.+.|-|||+.++..+|..
T Consensus 29 L~aLeE~-gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 29 LQALEEA-GIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHc-CCCccEEEEECHHHHHHHHHHcC
Confidence 3444333 34555899999999999999975
No 274
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=54.65 E-value=8.7 Score=27.98 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=21.8
Q ss_pred cccccccCCCC----ceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHVDFQ----RVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~~~~----~i~l~G~S~GG~la~~~a~~~ 35 (186)
++.|.++. +. --.+.|-|+|+.++..++...
T Consensus 23 l~~L~e~g-~~l~~~~~~i~G~SAGAl~aa~~a~g~ 57 (249)
T cd07220 23 ASCLLEHA-PFLVANARKIYGASAGALTATALVTGV 57 (249)
T ss_pred HHHHHhcC-CcccccCCeEEEEcHHHHHHHHHHcCC
Confidence 44555554 22 356889999999999988643
No 275
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=54.03 E-value=9 Score=30.28 Aligned_cols=31 Identities=19% Similarity=0.161 Sum_probs=22.0
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
++.|.++. ...=++.|-|+|+.+|+.++.+.
T Consensus 92 LkaL~E~g-l~p~vIsGTSaGAivAal~as~~ 122 (421)
T cd07230 92 LKALFEAN-LLPRIISGSSAGSIVAAILCTHT 122 (421)
T ss_pred HHHHHHcC-CCCCEEEEECHHHHHHHHHHcCC
Confidence 34454443 23338999999999999999743
No 276
>PLN02154 carbonic anhydrase
Probab=53.92 E-value=7.4 Score=28.95 Aligned_cols=30 Identities=10% Similarity=0.340 Sum_probs=24.3
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHH
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVA 32 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a 32 (186)
+++|...+++.+.|+|+|||-=|.+.+.+.
T Consensus 155 slEyAv~~L~v~~IvV~GHs~CGAV~Aal~ 184 (290)
T PLN02154 155 ALEFAVTTLQVENIIVMGHSNCGGIAALMS 184 (290)
T ss_pred HHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 466777777999999999999888777664
No 277
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=53.28 E-value=13 Score=27.81 Aligned_cols=24 Identities=25% Similarity=0.194 Sum_probs=21.0
Q ss_pred CCCceEEeecChhHHHHHHHHHHh
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
+...-+|.|-|||+.++..+|...
T Consensus 37 gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 37 GIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred CCCccEEEecCHHHHHHHHHHcCC
Confidence 467779999999999999999854
No 278
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.26 E-value=8.9 Score=25.99 Aligned_cols=34 Identities=24% Similarity=0.253 Sum_probs=27.7
Q ss_pred CCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCC
Q 038786 13 FQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPG 54 (186)
Q Consensus 13 ~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~ 54 (186)
.+.|.|+.+|||=.+|-.+++.. +++..+.+++-
T Consensus 56 y~hirlvAwSMGVwvAeR~lqg~--------~lksatAiNGT 89 (214)
T COG2830 56 YRHIRLVAWSMGVWVAERVLQGI--------RLKSATAINGT 89 (214)
T ss_pred hhhhhhhhhhHHHHHHHHHHhhc--------cccceeeecCC
Confidence 45889999999999999998866 67777777664
No 279
>PLN03014 carbonic anhydrase
Probab=53.00 E-value=8 Score=29.51 Aligned_cols=30 Identities=17% Similarity=0.366 Sum_probs=23.8
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHH
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVA 32 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a 32 (186)
+++|-..+++.+.|+|+|||-=|.+...+.
T Consensus 209 sLEYAV~~L~V~~IVV~GHs~CGaV~Aa~~ 238 (347)
T PLN03014 209 AIEYAVLHLKVENIVVIGHSACGGIKGLMS 238 (347)
T ss_pred HHHHHHHHhCCCEEEEeCCCCchHHHHHHh
Confidence 466667777999999999999887776554
No 280
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=52.97 E-value=12 Score=27.76 Aligned_cols=19 Identities=21% Similarity=0.307 Sum_probs=16.8
Q ss_pred EEeecChhHHHHHHHHHHh
Q 038786 17 FLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 17 ~l~G~S~GG~la~~~a~~~ 35 (186)
.++|-|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 7899999999999998643
No 281
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=51.83 E-value=10 Score=28.49 Aligned_cols=17 Identities=24% Similarity=0.423 Sum_probs=15.3
Q ss_pred EEeecChhHHHHHHHHH
Q 038786 17 FLIGDSSGGNVVHEVAA 33 (186)
Q Consensus 17 ~l~G~S~GG~la~~~a~ 33 (186)
.++|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 78999999999998873
No 282
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=51.68 E-value=6 Score=31.73 Aligned_cols=22 Identities=27% Similarity=0.370 Sum_probs=18.9
Q ss_pred ceEEeecChhHHHHHHHHHHhc
Q 038786 15 RVFLIGDSSGGNVVHEVAARAG 36 (186)
Q Consensus 15 ~i~l~G~S~GG~la~~~a~~~~ 36 (186)
+=++.|.|+||.+|..++.+..
T Consensus 203 P~IIsGsS~GaivAsl~~v~~~ 224 (543)
T KOG2214|consen 203 PNIISGSSAGAIVASLVGVRSN 224 (543)
T ss_pred chhhcCCchhHHHHHHHhhcch
Confidence 4478999999999999998764
No 283
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=50.99 E-value=1e+02 Score=23.42 Aligned_cols=64 Identities=16% Similarity=0.094 Sum_probs=43.5
Q ss_pred CEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 114 PFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 114 P~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
-++++||-.....-.-..++++|...|-.+--.-++|.|+.-....-. +.-+.+.+++..|+..
T Consensus 56 lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi--------~~~d~~v~D~~~~~~~ 119 (313)
T KOG1455|consen 56 LVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYV--------PSFDLVVDDVISFFDS 119 (313)
T ss_pred EEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccC--------CcHHHHHHHHHHHHHH
Confidence 368888866544224467889999998877777777765554432222 4567888888888763
No 284
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=50.52 E-value=12 Score=29.48 Aligned_cols=31 Identities=19% Similarity=0.178 Sum_probs=22.2
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
++.|.++. ...=++.|-|+|+.+|+.++.+.
T Consensus 86 lkaL~e~g-llp~iI~GtSAGAivaalla~~t 116 (407)
T cd07232 86 VKALLDAD-LLPNVISGTSGGSLVAALLCTRT 116 (407)
T ss_pred HHHHHhCC-CCCCEEEEECHHHHHHHHHHcCC
Confidence 34444544 33446999999999999999743
No 285
>KOG3787 consensus Glutamate/aspartate and neutral amino acid transporters [Amino acid transport and metabolism]
Probab=50.12 E-value=3.9 Score=32.25 Aligned_cols=32 Identities=22% Similarity=0.561 Sum_probs=27.4
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
+++|+.|.. ..-+.+.|+|.|+.+.-.++.+.
T Consensus 420 aVDWllDR~-RT~vNVlGDa~gagiv~hl~~~~ 451 (507)
T KOG3787|consen 420 AVDWLLDRL-RTTVNVLGDALGAGIVEHLSKKE 451 (507)
T ss_pred ehHHHHHHH-HHHHHhhhhHHHHHHHHHHHHhh
Confidence 678998887 45688999999999999998776
No 286
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=50.06 E-value=26 Score=27.34 Aligned_cols=44 Identities=23% Similarity=0.371 Sum_probs=27.6
Q ss_pred CCCCCEEEEeeCcc-cccccHH-HHHHHHHHCCCceEEEEeCCCCccccc
Q 038786 110 LKLPPFLLCVAGND-LIKDTEM-EYYEAMKKAGKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 110 ~~~pP~li~~g~~D-~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~H~~~~ 157 (186)
..+ |-+|+.|+.| .+++++. -+...|. .+..+...|+..|....
T Consensus 328 Lal-pKyivnaSgDdff~pDsa~lYyd~LP---G~kaLrmvPN~~H~~~n 373 (507)
T COG4287 328 LAL-PKYIVNASGDDFFVPDSANLYYDDLP---GEKALRMVPNDPHNLIN 373 (507)
T ss_pred ccc-cceeecccCCcccCCCccceeeccCC---CceeeeeCCCCcchhhH
Confidence 345 5566666655 6666553 3443333 35678889999998865
No 287
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=49.23 E-value=16 Score=26.51 Aligned_cols=20 Identities=25% Similarity=0.223 Sum_probs=17.4
Q ss_pred eEEeecChhHHHHHHHHHHh
Q 038786 16 VFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 16 i~l~G~S~GG~la~~~a~~~ 35 (186)
-.+.|-|+|+.++..++...
T Consensus 33 ~~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred CEEEEEcHHHHHHHHHHhCC
Confidence 38999999999999998744
No 288
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=48.46 E-value=15 Score=26.70 Aligned_cols=18 Identities=28% Similarity=0.505 Sum_probs=16.5
Q ss_pred EEeecChhHHHHHHHHHH
Q 038786 17 FLIGDSSGGNVVHEVAAR 34 (186)
Q Consensus 17 ~l~G~S~GG~la~~~a~~ 34 (186)
.++|-|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 589999999999999976
No 289
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=47.58 E-value=15 Score=28.27 Aligned_cols=18 Identities=28% Similarity=0.497 Sum_probs=16.2
Q ss_pred EEeecChhHHHHHHHHHH
Q 038786 17 FLIGDSSGGNVVHEVAAR 34 (186)
Q Consensus 17 ~l~G~S~GG~la~~~a~~ 34 (186)
.+.|-|.||.+|+.++..
T Consensus 46 liaGTStGgiiA~~la~~ 63 (349)
T cd07214 46 VIAGTSTGGLITAMLTAP 63 (349)
T ss_pred EEeeCCHHHHHHHHHhcC
Confidence 689999999999999873
No 290
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=47.24 E-value=16 Score=27.57 Aligned_cols=22 Identities=23% Similarity=0.268 Sum_probs=19.3
Q ss_pred CCCceEEeecChhHHHHHHHHH
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAA 33 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~ 33 (186)
+....++.|||.|=+-|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 5778899999999999988875
No 291
>PRK15219 carbonic anhydrase; Provisional
Probab=46.86 E-value=12 Score=27.27 Aligned_cols=30 Identities=13% Similarity=0.256 Sum_probs=23.6
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHH
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVA 32 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a 32 (186)
.++|-..+++.+.|+|+|||-=|.+...+.
T Consensus 132 slEyAv~~L~v~~IvVlGHt~CGav~Aa~~ 161 (245)
T PRK15219 132 SMEFACAVAGAKVVLVMGHTACGAVKGAID 161 (245)
T ss_pred HHHHHHHHcCCCEEEEecCCcchHHHHHHh
Confidence 456666777999999999999887776654
No 292
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=46.24 E-value=52 Score=26.93 Aligned_cols=45 Identities=18% Similarity=0.114 Sum_probs=31.1
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFLR 57 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~~ 57 (186)
+..+|.|+|+|.|+-+...++........ -.-|..++++-.+...
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke-~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKE-VGIIENVILFGAPVPT 489 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhccc-ccceeeeeeccCCccC
Confidence 77899999999999998877765533211 1247777777554433
No 293
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=45.41 E-value=16 Score=28.62 Aligned_cols=29 Identities=14% Similarity=0.119 Sum_probs=20.9
Q ss_pred cccccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 6 WLTEHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 6 ~l~~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
.|.++. .-.=+|.|-|+|+.+|+.+|...
T Consensus 104 aL~e~g-l~p~~i~GtS~Gaivaa~~a~~~ 132 (391)
T cd07229 104 ALWLRG-LLPRIITGTATGALIAALVGVHT 132 (391)
T ss_pred HHHHcC-CCCceEEEecHHHHHHHHHHcCC
Confidence 343433 33346999999999999999843
No 294
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=45.36 E-value=1.2e+02 Score=24.03 Aligned_cols=39 Identities=21% Similarity=0.336 Sum_probs=25.3
Q ss_pred CEEEEeeCccccc-ccHHHHHHHHHHCCCceEEEEeCCCC
Q 038786 114 PFLLCVAGNDLIK-DTEMEYYEAMKKAGKDVELLVSPGMG 152 (186)
Q Consensus 114 P~li~~g~~D~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~ 152 (186)
|++|++|..|... +.-..+++.|.+.|-.+-..-++|.+
T Consensus 195 P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G 234 (414)
T PRK05077 195 PTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVG 234 (414)
T ss_pred cEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCC
Confidence 8999999888543 22345667787777655555556543
No 295
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=45.28 E-value=20 Score=23.82 Aligned_cols=19 Identities=26% Similarity=0.331 Sum_probs=16.5
Q ss_pred CceEEeecChhHHHHHHHH
Q 038786 14 QRVFLIGDSSGGNVVHEVA 32 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a 32 (186)
+--++.|-|+|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4558899999999999988
No 296
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=45.19 E-value=25 Score=27.31 Aligned_cols=59 Identities=19% Similarity=0.302 Sum_probs=40.3
Q ss_pred CEEEEeeCccccccc--HHHHHHHHHHCC----------------------CceEEEEeCCCCccccccccccCCCcchh
Q 038786 114 PFLLCVAGNDLIKDT--EMEYYEAMKKAG----------------------KDVELLVSPGMGHSFYLDKIAVDMDPNTA 169 (186)
Q Consensus 114 P~li~~g~~D~~~~~--~~~~~~~l~~~~----------------------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 169 (186)
++||.+|..|.+++. .+...+.|.-.+ ...++..+.++||..+.
T Consensus 332 rVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~------------ 399 (415)
T PF00450_consen 332 RVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQ------------ 399 (415)
T ss_dssp EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHH------------
T ss_pred eeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChh------------
Confidence 899999999998873 344444433111 13467888999999988
Q ss_pred HHHHHHHHHHHHHhh
Q 038786 170 AQTCGLFQGIAEFMR 184 (186)
Q Consensus 170 ~~~~~~~~~i~~fl~ 184 (186)
++++.+++.+.+||+
T Consensus 400 dqP~~a~~m~~~fl~ 414 (415)
T PF00450_consen 400 DQPEAALQMFRRFLK 414 (415)
T ss_dssp HSHHHHHHHHHHHHC
T ss_pred hCHHHHHHHHHHHhc
Confidence 779999999999986
No 297
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=44.91 E-value=17 Score=27.59 Aligned_cols=22 Identities=27% Similarity=0.347 Sum_probs=18.0
Q ss_pred CCceEEeecChhHHHHHHHHHH
Q 038786 13 FQRVFLIGDSSGGNVVHEVAAR 34 (186)
Q Consensus 13 ~~~i~l~G~S~GG~la~~~a~~ 34 (186)
...-++.|-|+|+.+|+.++.+
T Consensus 95 l~p~~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 95 LLPRVIAGSSVGSIVCAIIATR 116 (323)
T ss_pred CCCCEEEEECHHHHHHHHHHcC
Confidence 3444699999999999999874
No 298
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=44.80 E-value=20 Score=26.05 Aligned_cols=30 Identities=27% Similarity=0.317 Sum_probs=21.3
Q ss_pred cccccccC-C-CCce-EEeecChhHHHHHHHHH
Q 038786 4 NNWLTEHV-D-FQRV-FLIGDSSGGNVVHEVAA 33 (186)
Q Consensus 4 l~~l~~~~-~-~~~i-~l~G~S~GG~la~~~a~ 33 (186)
+++|.++. . .+++ .+.|-|+|+.++..++.
T Consensus 18 l~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 18 AKALLRHGKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHcCchhhccCCEEEEECHHHHHHHHHhc
Confidence 45566654 1 1233 89999999999999973
No 299
>PRK10673 acyl-CoA esterase; Provisional
Probab=44.57 E-value=1.1e+02 Score=21.61 Aligned_cols=41 Identities=10% Similarity=0.049 Sum_probs=22.5
Q ss_pred CCCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCcccc
Q 038786 112 LPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFY 156 (186)
Q Consensus 112 ~pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 156 (186)
.||++++||-.+... .-..+...|.+ ..++..++--+|+..
T Consensus 16 ~~~iv~lhG~~~~~~-~~~~~~~~l~~---~~~vi~~D~~G~G~s 56 (255)
T PRK10673 16 NSPIVLVHGLFGSLD-NLGVLARDLVN---DHDIIQVDMRNHGLS 56 (255)
T ss_pred CCCEEEECCCCCchh-HHHHHHHHHhh---CCeEEEECCCCCCCC
Confidence 459999999765431 12344445543 245555554456543
No 300
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=44.32 E-value=19 Score=29.56 Aligned_cols=27 Identities=15% Similarity=0.179 Sum_probs=21.9
Q ss_pred ccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 9 EHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 9 ~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
++.+...-+++|||+|=..|+..+...
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 455778889999999999888887644
No 301
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=44.20 E-value=41 Score=24.70 Aligned_cols=42 Identities=24% Similarity=0.237 Sum_probs=28.5
Q ss_pred CCEEEEeeCcccccccH--HHHHHHHHHCCCceEEEEeCCCCccc
Q 038786 113 PPFLLCVAGNDLIKDTE--MEYYEAMKKAGKDVELLVSPGMGHSF 155 (186)
Q Consensus 113 pP~li~~g~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~H~~ 155 (186)
+++.+..|++|.=++.. .++.++......++++.+ +|..|+|
T Consensus 222 ~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~-~~i~HaF 265 (266)
T PF10230_consen 222 DKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDE-EGIPHAF 265 (266)
T ss_pred CEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEec-CCCCCCC
Confidence 38999999999887643 333333333334666666 8999987
No 302
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=44.10 E-value=9.9 Score=26.86 Aligned_cols=31 Identities=10% Similarity=0.221 Sum_probs=24.6
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHH
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAA 33 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~ 33 (186)
.++|-.+.++.+.|+|+||+-=|.+.+.+..
T Consensus 81 sleyAv~~L~v~~IiV~GH~~CGav~aa~~~ 111 (207)
T COG0288 81 SLEYAVYVLGVKEIIVCGHTDCGAVKAALDD 111 (207)
T ss_pred HHHHHHHHcCCCEEEEecCCCcHHHHhcccc
Confidence 3455666779999999999998888877664
No 303
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=43.97 E-value=18 Score=27.42 Aligned_cols=17 Identities=24% Similarity=0.386 Sum_probs=14.9
Q ss_pred EEeecChhHHHHHHHHH
Q 038786 17 FLIGDSSGGNVVHEVAA 33 (186)
Q Consensus 17 ~l~G~S~GG~la~~~a~ 33 (186)
.++|-|.||.+|+.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 78999999999998763
No 304
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=43.48 E-value=21 Score=26.86 Aligned_cols=31 Identities=19% Similarity=0.160 Sum_probs=21.7
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHHh
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
++.|.++. ...=++.|-|+|+.+|+.++...
T Consensus 88 l~aL~e~~-l~~~~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 88 VKALWEQD-LLPRVISGSSAGAIVAALLGTHT 118 (298)
T ss_pred HHHHHHcC-CCCCEEEEEcHHHHHHHHHHcCC
Confidence 34444443 23346999999999999999753
No 305
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=43.26 E-value=19 Score=27.42 Aligned_cols=17 Identities=24% Similarity=0.085 Sum_probs=14.7
Q ss_pred EEeecChhHHHHHHHHH
Q 038786 17 FLIGDSSGGNVVHEVAA 33 (186)
Q Consensus 17 ~l~G~S~GG~la~~~a~ 33 (186)
+++|||+|=+.|+.++.
T Consensus 127 ~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 127 VCAGLSLGEYTALVFAG 143 (343)
T ss_pred eeeeccHHHHHHHHHhC
Confidence 68999999988888774
No 306
>PRK10437 carbonic anhydrase; Provisional
Probab=43.01 E-value=16 Score=26.16 Aligned_cols=29 Identities=14% Similarity=0.344 Sum_probs=22.5
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHH
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVA 32 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a 32 (186)
++|-.+.++.+.|+|+|||-=|.+...+.
T Consensus 81 leyAV~~L~v~~IvV~GHt~CG~V~Aal~ 109 (220)
T PRK10437 81 VQYAVDVLEVEHIIICGHYGCGGVQAAVE 109 (220)
T ss_pred HHHHHHHcCCCEEEEeCCCCchHHHHHHc
Confidence 44555566899999999999888877663
No 307
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=42.40 E-value=7.4 Score=30.31 Aligned_cols=21 Identities=24% Similarity=0.466 Sum_probs=16.6
Q ss_pred CCCceEEeecChhHHHHHHHH
Q 038786 12 DFQRVFLIGDSSGGNVVHEVA 32 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a 32 (186)
..++|-.+|||.||.++....
T Consensus 148 si~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 148 SIEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred ccceeeeeeeecCCeeeeEEE
Confidence 358999999999997765443
No 308
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=42.17 E-value=70 Score=25.98 Aligned_cols=67 Identities=12% Similarity=0.059 Sum_probs=45.2
Q ss_pred CEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 114 PFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 114 P~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
-+++.+|..|+= .. +...- .....+....+.|+.|...+.+....-.|.....+..+.+.+..||..
T Consensus 435 nVvf~NG~~DPW--h~--LG~~~-st~~~~~~~li~gtsHCaDMyp~~~sD~~~L~~aR~~i~~~l~~wl~~ 501 (514)
T KOG2182|consen 435 NVVFPNGSLDPW--HA--LGLQN-STDSSVVSILINGTSHCADMYPARDSDSPSLKAARNRIDQNLARWLHQ 501 (514)
T ss_pred eEEecCCCCCch--hh--hcccc-CCCCCceEEEecCCccccccCCCCCCccHHHHHHHHHHHHHHHHHhhh
Confidence 789999999977 22 22111 344567888899999999875544444444555666777788888763
No 309
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=41.63 E-value=1.3e+02 Score=21.70 Aligned_cols=41 Identities=12% Similarity=0.074 Sum_probs=24.6
Q ss_pred CCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccc
Q 038786 113 PPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYL 157 (186)
Q Consensus 113 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 157 (186)
+|++++||--+.. ..+...+.......++..++--+|+...
T Consensus 26 ~plvllHG~~~~~----~~w~~~~~~L~~~~~vi~~Dl~G~G~S~ 66 (276)
T TIGR02240 26 TPLLIFNGIGANL----ELVFPFIEALDPDLEVIAFDVPGVGGSS 66 (276)
T ss_pred CcEEEEeCCCcch----HHHHHHHHHhccCceEEEECCCCCCCCC
Confidence 5999999965433 2333333333335677777767787654
No 310
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=40.96 E-value=7.7 Score=13.08 Aligned_cols=6 Identities=67% Similarity=0.855 Sum_probs=2.5
Q ss_pred ecChhH
Q 038786 20 GDSSGG 25 (186)
Q Consensus 20 G~S~GG 25 (186)
|+|+||
T Consensus 1 gf~l~G 6 (10)
T PF08250_consen 1 GFSLGG 6 (10)
T ss_pred Cccccc
Confidence 344444
No 311
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=40.95 E-value=22 Score=30.35 Aligned_cols=19 Identities=26% Similarity=0.146 Sum_probs=16.6
Q ss_pred ceEEeecChhHHHHHHHHH
Q 038786 15 RVFLIGDSSGGNVVHEVAA 33 (186)
Q Consensus 15 ~i~l~G~S~GG~la~~~a~ 33 (186)
-=+|.|.|+||.++..+|.
T Consensus 67 ~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 67 VDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CceEEeeCHHHHHHHHHHc
Confidence 3478999999999999986
No 312
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=40.89 E-value=1.3e+02 Score=21.31 Aligned_cols=41 Identities=22% Similarity=0.298 Sum_probs=20.9
Q ss_pred CCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCc
Q 038786 113 PPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGH 153 (186)
Q Consensus 113 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H 153 (186)
||++++||.-......-..+...+.+.+..+-..-.+|.++
T Consensus 26 ~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~ 66 (288)
T TIGR01250 26 IKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGY 66 (288)
T ss_pred CeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCC
Confidence 58999999643221122334445555454444444454444
No 313
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=39.95 E-value=1.5e+02 Score=21.92 Aligned_cols=67 Identities=9% Similarity=0.022 Sum_probs=34.6
Q ss_pred CEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 114 PFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 114 P~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
|+.++....-...+....++..|...|. ....|...+|.-.-.....+++. ...++-+..+.+|+++
T Consensus 31 ~tiliA~Gf~rrmdh~agLA~YL~~NGF--hViRyDsl~HvGlSsG~I~eftm---s~g~~sL~~V~dwl~~ 97 (294)
T PF02273_consen 31 NTILIAPGFARRMDHFAGLAEYLSANGF--HVIRYDSLNHVGLSSGDINEFTM---SIGKASLLTVIDWLAT 97 (294)
T ss_dssp -EEEEE-TT-GGGGGGHHHHHHHHTTT----EEEE---B-------------H---HHHHHHHHHHHHHHHH
T ss_pred CeEEEecchhHHHHHHHHHHHHHhhCCe--EEEeccccccccCCCCChhhcch---HHhHHHHHHHHHHHHh
Confidence 6667776666555566788888988886 66778877786665544444444 5667778889999874
No 314
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=39.28 E-value=1.2e+02 Score=22.10 Aligned_cols=69 Identities=10% Similarity=0.038 Sum_probs=33.0
Q ss_pred CCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 113 PPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 113 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
||++++||--.... .=......|.+. .++..+.--||+...............-..++..+++.+|+++
T Consensus 30 ~~vlllHG~~~~~~-~w~~~~~~L~~~---~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~ 98 (294)
T PLN02824 30 PALVLVHGFGGNAD-HWRKNTPVLAKS---HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSD 98 (294)
T ss_pred CeEEEECCCCCChh-HHHHHHHHHHhC---CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHH
Confidence 58999999865431 112334445443 3555555555665432110000000001245667777777653
No 315
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=38.91 E-value=94 Score=23.37 Aligned_cols=23 Identities=22% Similarity=0.156 Sum_probs=18.6
Q ss_pred CCCCceEEeecChhHHHHHHHHH
Q 038786 11 VDFQRVFLIGDSSGGNVVHEVAA 33 (186)
Q Consensus 11 ~~~~~i~l~G~S~GG~la~~~a~ 33 (186)
.+...-+++|||+|=.-|+.++.
T Consensus 81 ~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 81 WGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp TTHCESEEEESTTHHHHHHHHTT
T ss_pred cccccceeeccchhhHHHHHHCC
Confidence 35778899999999888877654
No 316
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.27 E-value=27 Score=26.58 Aligned_cols=26 Identities=19% Similarity=0.321 Sum_probs=22.3
Q ss_pred CCCceEEeecChhHHHHHHHHHHhcc
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQ 37 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~ 37 (186)
+.++|.++|+|+++++|-.+-....+
T Consensus 115 ~a~kvLvvGDslm~gla~gl~~al~t 140 (354)
T COG2845 115 DADKVLVVGDSLMQGLAEGLDKALAT 140 (354)
T ss_pred CCCEEEEechHHhhhhHHHHHHHhcc
Confidence 78899999999999999888766643
No 317
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=37.80 E-value=30 Score=25.26 Aligned_cols=20 Identities=15% Similarity=0.169 Sum_probs=17.1
Q ss_pred eEEeecChhHHHHHHHHHHh
Q 038786 16 VFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 16 i~l~G~S~GG~la~~~a~~~ 35 (186)
-.+.|-|+|+..+..++...
T Consensus 34 ~~i~GtSAGAl~aa~~asg~ 53 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGL 53 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCC
Confidence 47999999999999998643
No 318
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=37.48 E-value=1.6e+02 Score=22.43 Aligned_cols=41 Identities=15% Similarity=0.119 Sum_probs=24.2
Q ss_pred CCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccc
Q 038786 113 PPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSF 155 (186)
Q Consensus 113 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 155 (186)
|+++++||-.+.....-..++..|.+.|-.+-..-++| |+.
T Consensus 88 ~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G--~G~ 128 (349)
T PLN02385 88 AAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPG--FGL 128 (349)
T ss_pred eEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCC--CCC
Confidence 47899999765431112456667776665555555554 554
No 319
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=36.84 E-value=15 Score=27.68 Aligned_cols=16 Identities=38% Similarity=0.611 Sum_probs=13.6
Q ss_pred CCCceEEeecChhHHH
Q 038786 12 DFQRVFLIGDSSGGNV 27 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~l 27 (186)
.+.-|+++|+|+|++.
T Consensus 10 ~~~g~i~~gds~~ahf 25 (305)
T cd01826 10 QPMGVILLGDSAGAHF 25 (305)
T ss_pred CCceEEEecccccccc
Confidence 5667999999999975
No 320
>COG1647 Esterase/lipase [General function prediction only]
Probab=36.30 E-value=1.1e+02 Score=22.20 Aligned_cols=41 Identities=17% Similarity=0.033 Sum_probs=31.5
Q ss_pred CEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccc
Q 038786 114 PFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSF 155 (186)
Q Consensus 114 P~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 155 (186)
-+|++||=.-... +.+.+++.|++.|-.+..=.|||.+|..
T Consensus 17 AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~ 57 (243)
T COG1647 17 AVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRYPGHGTLP 57 (243)
T ss_pred EEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCCCCCCCCH
Confidence 6899998654332 4588999999999888877889877655
No 321
>COG3675 Predicted lipase [Lipid metabolism]
Probab=35.78 E-value=12 Score=27.96 Aligned_cols=29 Identities=28% Similarity=0.383 Sum_probs=21.6
Q ss_pred ccccccCCC-CceEEeecChhHHHHHHHHH
Q 038786 5 NWLTEHVDF-QRVFLIGDSSGGNVVHEVAA 33 (186)
Q Consensus 5 ~~l~~~~~~-~~i~l~G~S~GG~la~~~a~ 33 (186)
.||++.... -++.++|||.||+|+...+.
T Consensus 165 ~~lleeiP~~Yrig~tghS~g~aii~vrGt 194 (332)
T COG3675 165 QTLLEEIPQGYRIGITGHSSGGAIICVRGT 194 (332)
T ss_pred HHHHHhcccceEEEEEeecCCccEEEEecc
Confidence 566677644 57899999999988755554
No 322
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=33.42 E-value=13 Score=27.31 Aligned_cols=32 Identities=13% Similarity=0.254 Sum_probs=23.9
Q ss_pred ccccccccCCCCceEEeecChhHHHHHHHHHH
Q 038786 3 ENNWLTEHVDFQRVFLIGDSSGGNVVHEVAAR 34 (186)
Q Consensus 3 ~l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~ 34 (186)
+++|-....+.+.|.++|||.=|+++..+.-.
T Consensus 143 alE~aV~~lkvenIiv~ghs~cgGik~~m~~~ 174 (276)
T KOG1578|consen 143 ALEYAVTTLKVENIIVIGHSLCGGIKGLMSFS 174 (276)
T ss_pred hHHHHHHHhccceEEEeccccCCchhhccccc
Confidence 34444455588999999999999888776643
No 323
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=33.20 E-value=19 Score=23.87 Aligned_cols=12 Identities=33% Similarity=0.598 Sum_probs=10.8
Q ss_pred eEEeecChhHHH
Q 038786 16 VFLIGDSSGGNV 27 (186)
Q Consensus 16 i~l~G~S~GG~l 27 (186)
.+++|.|+|+.+
T Consensus 70 ~vi~G~SAGA~i 81 (154)
T PF03575_consen 70 GVIIGTSAGAMI 81 (154)
T ss_dssp SEEEEETHHHHC
T ss_pred CEEEEEChHHhh
Confidence 789999999976
No 324
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=33.02 E-value=31 Score=22.77 Aligned_cols=29 Identities=10% Similarity=0.326 Sum_probs=20.6
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHH
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVA 32 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a 32 (186)
+.|.....+.+.|+|+|||-=|.+...+.
T Consensus 45 le~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 45 LEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp HHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred eeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 45556667899999999999888775544
No 325
>PLN02578 hydrolase
Probab=32.97 E-value=2e+02 Score=21.95 Aligned_cols=62 Identities=10% Similarity=0.040 Sum_probs=31.9
Q ss_pred CCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 113 PPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 113 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
||++++||--.... .-......|.+ ..++..+.-.+|+....+... -..+...+++.+|+++
T Consensus 87 ~~vvliHG~~~~~~-~w~~~~~~l~~---~~~v~~~D~~G~G~S~~~~~~-------~~~~~~a~~l~~~i~~ 148 (354)
T PLN02578 87 LPIVLIHGFGASAF-HWRYNIPELAK---KYKVYALDLLGFGWSDKALIE-------YDAMVWRDQVADFVKE 148 (354)
T ss_pred CeEEEECCCCCCHH-HHHHHHHHHhc---CCEEEEECCCCCCCCCCcccc-------cCHHHHHHHHHHHHHH
Confidence 59999999765321 11222333332 356666666667764422110 1234455666676653
No 326
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=32.81 E-value=98 Score=23.53 Aligned_cols=64 Identities=14% Similarity=0.185 Sum_probs=42.9
Q ss_pred CEEEEeeCccccccc-HHHHHHHHHHCCCc--eEEEEeCCCCccccccccccCCCcchhHHHHHHHHHHHHHhhhC
Q 038786 114 PFLLCVAGNDLIKDT-EMEYYEAMKKAGKD--VELLVSPGMGHSFYLDKIAVDMDPNTAAQTCGLFQGIAEFMRKH 186 (186)
Q Consensus 114 P~li~~g~~D~~~~~-~~~~~~~l~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 186 (186)
-.+-+-||+|.+.-. ..+.+..|-....+ .+...-+++||.--+... ...+++.-.|.+|+.++
T Consensus 341 aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGs---------rfr~eIvPri~dFI~~~ 407 (415)
T COG4553 341 ALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGS---------RFREEIVPRIRDFIRRY 407 (415)
T ss_pred eEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccc---------hHHHHHHHHHHHHHHHh
Confidence 678889999977432 23445555544332 244556899997766432 56788999999999753
No 327
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=31.66 E-value=36 Score=25.42 Aligned_cols=42 Identities=24% Similarity=0.316 Sum_probs=28.2
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeEEEecCCCCC
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAGAIPIHPGFL 56 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~~vl~~p~~~ 56 (186)
...|++|.|.|.|+.-+........+. ..++.+++..-|...
T Consensus 107 ~RPkL~l~GeSLGa~g~~~af~~~~~~---~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 107 RRPKLYLYGESLGAYGGEAAFDGLDDL---RDRVDGALWVGPPFF 148 (289)
T ss_pred cCCeEEEeccCccccchhhhhccHHHh---hhhcceEEEeCCCCC
Confidence 456899999999998776655433222 235788777766543
No 328
>PF04816 DUF633: Family of unknown function (DUF633) ; InterPro: IPR006901 This is a family of uncharacterised bacterial proteins.; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity; PDB: 3LEC_A 3KU1_G 3KR9_A 3GNL_B.
Probab=30.98 E-value=52 Score=23.23 Aligned_cols=22 Identities=18% Similarity=0.483 Sum_probs=15.7
Q ss_pred CCceEEeecChhHHHHHHHHHHhc
Q 038786 13 FQRVFLIGDSSGGNVVHEVAARAG 36 (186)
Q Consensus 13 ~~~i~l~G~S~GG~la~~~a~~~~ 36 (186)
.+-|++.| |||.+...+.....
T Consensus 67 ~d~ivIAG--MGG~lI~~ILe~~~ 88 (205)
T PF04816_consen 67 VDTIVIAG--MGGELIIEILEAGP 88 (205)
T ss_dssp --EEEEEE--E-HHHHHHHHHHTG
T ss_pred CCEEEEec--CCHHHHHHHHHhhH
Confidence 56778877 99999999988773
No 329
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=30.82 E-value=2.1e+02 Score=20.85 Aligned_cols=40 Identities=23% Similarity=0.224 Sum_probs=25.2
Q ss_pred CCEEEEeeCccccccc---HHHHHHHHHHCCCceEEEEeCCCC
Q 038786 113 PPFLLCVAGNDLIKDT---EMEYYEAMKKAGKDVELLVSPGMG 152 (186)
Q Consensus 113 pP~li~~g~~D~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~ 152 (186)
++++++||..+..... ...+++.|.+.|..+-..-++|.+
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G 69 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMG 69 (274)
T ss_pred CeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCC
Confidence 4788888887744322 345678888877655555555543
No 330
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=30.80 E-value=31 Score=25.15 Aligned_cols=14 Identities=43% Similarity=0.665 Sum_probs=11.0
Q ss_pred CCCceEEeecChhH
Q 038786 12 DFQRVFLIGDSSGG 25 (186)
Q Consensus 12 ~~~~i~l~G~S~GG 25 (186)
...+|.|+|+|+|=
T Consensus 178 ~R~NvlLlGDslgD 191 (246)
T PF05822_consen 178 KRTNVLLLGDSLGD 191 (246)
T ss_dssp T--EEEEEESSSGG
T ss_pred cCCcEEEecCccCC
Confidence 67789999999996
No 331
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=30.59 E-value=25 Score=23.57 Aligned_cols=27 Identities=22% Similarity=0.329 Sum_probs=19.8
Q ss_pred cccccccCCCCceEEeecChhHHHHHH
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHE 30 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~ 30 (186)
+.|-....+.+.|+|+|||-=|.+...
T Consensus 82 l~yav~~l~v~~IvV~GHt~CG~~~a~ 108 (154)
T cd03378 82 LEYAVEVLGVPLVVVLGHESCGAVAAA 108 (154)
T ss_pred HHHHHHHhCCCEEEEEcCCCccHHHHH
Confidence 455556668999999999995555543
No 332
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=29.97 E-value=51 Score=24.50 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=18.3
Q ss_pred CCCceEEee-cChhHHHHHHHHHH
Q 038786 12 DFQRVFLIG-DSSGGNVVHEVAAR 34 (186)
Q Consensus 12 ~~~~i~l~G-~S~GG~la~~~a~~ 34 (186)
+.++|.++| -.||+.+|..++..
T Consensus 4 ~~~~V~ViGaG~mG~~iA~~~a~~ 27 (286)
T PRK07819 4 AIQRVGVVGAGQMGAGIAEVCARA 27 (286)
T ss_pred CccEEEEEcccHHHHHHHHHHHhC
Confidence 356787777 78999999988764
No 333
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=29.90 E-value=47 Score=26.00 Aligned_cols=19 Identities=21% Similarity=0.232 Sum_probs=16.4
Q ss_pred eEEeecChhHHHHHHHHHH
Q 038786 16 VFLIGDSSGGNVVHEVAAR 34 (186)
Q Consensus 16 i~l~G~S~GG~la~~~a~~ 34 (186)
-.+.|-|+|+.++..++..
T Consensus 46 d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 46 HRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred CeEEEEcHHHHHHHHHHhC
Confidence 3599999999999998864
No 334
>PF08357 SEFIR: SEFIR domain; InterPro: IPR013568 This domain is found in IL17 receptors (IL17Rs, e.g. Q60943 from SWISSPROT) and SEF proteins (e.g. Q8QHJ9 from SWISSPROT). The latter are feedback inhibitors of FGF signalling and are also thought to be receptors. Due to its similarity to the TIR domain (IPR000157 from INTERPRO), the SEFIR region is thought to be involved in homotypic interactions with other SEFIR/TIR-domain-containing proteins. Thus, SEFs and IL17Rs may be involved in TOLL/IL1R-like signalling pathways [].
Probab=29.70 E-value=63 Score=21.10 Aligned_cols=38 Identities=13% Similarity=0.055 Sum_probs=28.5
Q ss_pred CCEEEEeeCccccc-ccHHHHHHHHHHC-CCceEEEEeCC
Q 038786 113 PPFLLCVAGNDLIK-DTEMEYYEAMKKA-GKDVELLVSPG 150 (186)
Q Consensus 113 pP~li~~g~~D~~~-~~~~~~~~~l~~~-~~~~~~~~~~~ 150 (186)
|++||+++.+...- ....+++..|++. |.++.+..++.
T Consensus 1 ~kVfI~Ys~d~~~h~~~V~~la~~L~~~~g~~V~lD~~~~ 40 (150)
T PF08357_consen 1 RKVFISYSHDSEEHKEWVLALAEFLRQNCGIDVILDQWEL 40 (150)
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHHHHhccCCceeecHHhh
Confidence 47888888865442 3468999999988 98888777764
No 335
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=29.35 E-value=19 Score=23.64 Aligned_cols=26 Identities=8% Similarity=0.029 Sum_probs=17.7
Q ss_pred cccccccCCCCceEEeecChhHHHHH
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVH 29 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~ 29 (186)
+.|.....+.+.|+|+||+-=|.+..
T Consensus 46 l~~av~~l~~~~IiV~gHt~Cg~~~a 71 (142)
T cd03379 46 LVVSVYLLGTREIIVIHHTDCGMLTF 71 (142)
T ss_pred HHHHHHHhCCCEEEEEeecCCcceEe
Confidence 34445556889999999986554443
No 336
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=29.01 E-value=1e+02 Score=24.42 Aligned_cols=42 Identities=17% Similarity=0.161 Sum_probs=25.5
Q ss_pred CCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccccccc
Q 038786 113 PPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSFYLDK 159 (186)
Q Consensus 113 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 159 (186)
.-+++++|+.|+=..-+ ........+...++||+.|......
T Consensus 377 tnviFtNG~~DPW~~lg-----v~~~~~~~~~~~~I~g~~Hc~Dl~~ 418 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG-----VTSDSSDSVPAIVIPGGAHCSDLYP 418 (434)
T ss_dssp -SEEEEEETT-CCGGGS-------S-SSSSEEEEEETT--TTGGGS-
T ss_pred CeEEeeCCCCCCccccc-----CCCCCCCCcccEEECCCeeeccccC
Confidence 37999999999775433 1223345667778999999987753
No 337
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=28.28 E-value=95 Score=23.15 Aligned_cols=21 Identities=29% Similarity=0.365 Sum_probs=16.6
Q ss_pred ceEEeecChhHHHHHHHHHHh
Q 038786 15 RVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 15 ~i~l~G~S~GG~la~~~a~~~ 35 (186)
+|+|+|-+.+|..+..++.+.
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~ 23 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARA 23 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHT
T ss_pred eEEEECCCHHHHHHHHHHHhc
Confidence 689999999999888888877
No 338
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=28.24 E-value=14 Score=26.17 Aligned_cols=15 Identities=33% Similarity=0.370 Sum_probs=12.1
Q ss_pred ceEEeecChhHHHHH
Q 038786 15 RVFLIGDSSGGNVVH 29 (186)
Q Consensus 15 ~i~l~G~S~GG~la~ 29 (186)
-+..+|+|+|++++.
T Consensus 118 G~~YiG~SAGA~ia~ 132 (224)
T COG3340 118 GTPYIGWSAGANIAG 132 (224)
T ss_pred CCceEEeccCceeec
Confidence 356799999998873
No 339
>PRK05629 hypothetical protein; Validated
Probab=27.97 E-value=80 Score=23.81 Aligned_cols=41 Identities=7% Similarity=0.216 Sum_probs=25.4
Q ss_pred CCCCEEEEeeCcccccccHHH-HHHHHHHCC-CceEEEEeCCC
Q 038786 111 KLPPFLLCVAGNDLIKDTEME-YYEAMKKAG-KDVELLVSPGM 151 (186)
Q Consensus 111 ~~pP~li~~g~~D~~~~~~~~-~~~~l~~~~-~~~~~~~~~~~ 151 (186)
.++|+++++|+++.++..... +.+.+...+ .+..+.++.+.
T Consensus 4 ~l~~vyL~~G~e~~l~~~~~~~i~~~~~~~~~~~~n~~~~d~~ 46 (318)
T PRK05629 4 VQPPVHLVLGDDEFLAERARLNIVHDIRSSMADSLQVTTLKAS 46 (318)
T ss_pred cCCceEEEEeCHHHHHHHHHHHHHHHHhccCCCCCceEEeecc
Confidence 456999999999977654433 555554433 34566666543
No 340
>KOG0813 consensus Glyoxylase [General function prediction only]
Probab=27.71 E-value=1.6e+02 Score=21.86 Aligned_cols=64 Identities=14% Similarity=0.181 Sum_probs=33.7
Q ss_pred EEEEeeCcccccccHHHHHHHHH-HCCCceEEEEeCCCCccccc--cccccCCCcchhHHHHHHHHHHHHHhhh
Q 038786 115 FLLCVAGNDLIKDTEMEYYEAMK-KAGKDVELLVSPGMGHSFYL--DKIAVDMDPNTAAQTCGLFQGIAEFMRK 185 (186)
Q Consensus 115 ~li~~g~~D~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~H~~~~--~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 185 (186)
+|+..|.-+.+-.....+...+. -...+.+..+||| |.+.. ..+..+-+| .....+..++|+.+
T Consensus 140 tlf~~GcG~~FEgt~~~M~~sl~~l~~L~~~t~iypG--HeYt~~n~kf~~~ve~-----~n~~~q~~l~~~~~ 206 (265)
T KOG0813|consen 140 TLFGAGCGRFFEGTAEQMDSSLNELIALPDDTRIYPG--HEYTKSNLKFARYVEP-----RNEVEQEKLDWLVE 206 (265)
T ss_pred ceeecCccchhcCCHHHHHHhHHHhhcCCCCceEccC--cccccccceeeeeccc-----ccHHHHHHHHHHHH
Confidence 45555555555444566656665 3445677888996 55543 222222222 33445556666543
No 341
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=27.57 E-value=1.3e+02 Score=17.49 Aligned_cols=27 Identities=7% Similarity=0.160 Sum_probs=15.3
Q ss_pred CCCEEEEeeCcccccccH--HHHHHHHHH
Q 038786 112 LPPFLLCVAGNDLIKDTE--MEYYEAMKK 138 (186)
Q Consensus 112 ~pP~li~~g~~D~~~~~~--~~~~~~l~~ 138 (186)
.||++++.+.+...++.+ +-+.+.+.+
T Consensus 38 ~PPtFv~f~N~~~~~~~sY~ryL~n~lRe 66 (80)
T PF14714_consen 38 RPPTFVLFVNDPELLPESYKRYLENQLRE 66 (80)
T ss_dssp TTTEEEEEES-CCC--HHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 579999999986665543 334444443
No 342
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=27.21 E-value=31 Score=19.18 Aligned_cols=12 Identities=33% Similarity=0.301 Sum_probs=6.1
Q ss_pred CCCEEEEeeCcc
Q 038786 112 LPPFLLCVAGND 123 (186)
Q Consensus 112 ~pP~li~~g~~D 123 (186)
.||+|+.||-.+
T Consensus 43 k~pVll~HGL~~ 54 (63)
T PF04083_consen 43 KPPVLLQHGLLQ 54 (63)
T ss_dssp --EEEEE--TT-
T ss_pred CCcEEEECCccc
Confidence 569999999654
No 343
>PF11823 DUF3343: Protein of unknown function (DUF3343); InterPro: IPR021778 This family of proteins are functionally uncharacterised. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length.
Probab=26.38 E-value=1.3e+02 Score=16.95 Aligned_cols=29 Identities=31% Similarity=0.517 Sum_probs=21.3
Q ss_pred HHHHHHHHHHCCCceEEEEeC-----CCCccccc
Q 038786 129 EMEYYEAMKKAGKDVELLVSP-----GMGHSFYL 157 (186)
Q Consensus 129 ~~~~~~~l~~~~~~~~~~~~~-----~~~H~~~~ 157 (186)
...+.+.|++.|.++++.-.| +||..+..
T Consensus 14 a~~~ek~lk~~gi~~~liP~P~~i~~~CG~al~~ 47 (73)
T PF11823_consen 14 AMKAEKLLKKNGIPVRLIPTPREISAGCGLALRF 47 (73)
T ss_pred HHHHHHHHHHCCCcEEEeCCChhccCCCCEEEEE
Confidence 346677888888888887766 57777766
No 344
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.28 E-value=35 Score=25.11 Aligned_cols=15 Identities=40% Similarity=0.565 Sum_probs=13.1
Q ss_pred CCCCceEEeecChhH
Q 038786 11 VDFQRVFLIGDSSGG 25 (186)
Q Consensus 11 ~~~~~i~l~G~S~GG 25 (186)
.+...|+++|+|+|-
T Consensus 226 ~~~~nVillGdsigd 240 (298)
T KOG3128|consen 226 AGRVNVILLGDSIGD 240 (298)
T ss_pred cCCceEEEecccccc
Confidence 377899999999996
No 345
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=25.99 E-value=2.4e+02 Score=22.23 Aligned_cols=40 Identities=13% Similarity=0.143 Sum_probs=24.0
Q ss_pred CCEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccc
Q 038786 113 PPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSF 155 (186)
Q Consensus 113 pP~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 155 (186)
++++++||-.+... .-..++..|.+.|-.+ ..+.-.+|+-
T Consensus 137 ~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V--~~~D~rGhG~ 176 (395)
T PLN02652 137 GILIIIHGLNEHSG-RYLHFAKQLTSCGFGV--YAMDWIGHGG 176 (395)
T ss_pred eEEEEECCchHHHH-HHHHHHHHHHHCCCEE--EEeCCCCCCC
Confidence 47899999876431 2346677777766444 4444444554
No 346
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=25.84 E-value=39 Score=20.06 Aligned_cols=31 Identities=13% Similarity=0.106 Sum_probs=24.7
Q ss_pred cccccccCCCCceEEeecChhHHHHHHHHHH
Q 038786 4 NNWLTEHVDFQRVFLIGDSSGGNVVHEVAAR 34 (186)
Q Consensus 4 l~~l~~~~~~~~i~l~G~S~GG~la~~~a~~ 34 (186)
++-+++.++...|.|.|-+..-+.|-.+...
T Consensus 33 ~~~l~~~LG~QdV~V~Gip~~sh~ArvLVeA 63 (84)
T PF07643_consen 33 VDGLRQALGPQDVTVYGIPADSHFARVLVEA 63 (84)
T ss_pred HHHHHHHhCCceeEEEccCCccHHHHHHHHh
Confidence 3445667789999999999999998877653
No 347
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=25.66 E-value=16 Score=26.50 Aligned_cols=22 Identities=27% Similarity=0.377 Sum_probs=16.9
Q ss_pred cccccccccC--CCCceEEeecCh
Q 038786 2 RENNWLTEHV--DFQRVFLIGDSS 23 (186)
Q Consensus 2 ~~l~~l~~~~--~~~~i~l~G~S~ 23 (186)
.|++||.+.. +.++++++|+|.
T Consensus 168 ~Al~~L~~~~~~~~~~vl~aGDSg 191 (247)
T PF05116_consen 168 AALRYLMERWGIPPEQVLVAGDSG 191 (247)
T ss_dssp HHHHHHHHHHT--GGGEEEEESSG
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCC
Confidence 4678887775 567999999994
No 348
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=25.40 E-value=1.3e+02 Score=20.59 Aligned_cols=36 Identities=11% Similarity=0.053 Sum_probs=25.9
Q ss_pred CEEEEeeCcccccc-cHHHHHHHHHHCCCceEEEEeC
Q 038786 114 PFLLCVAGNDLIKD-TEMEYYEAMKKAGKDVELLVSP 149 (186)
Q Consensus 114 P~li~~g~~D~~~~-~~~~~~~~l~~~~~~~~~~~~~ 149 (186)
.+||+.++.|-... -....+..|.+.|.++++.-..
T Consensus 2 k~LIlYstr~GqT~kIA~~iA~~L~e~g~qvdi~dl~ 38 (175)
T COG4635 2 KTLILYSTRDGQTRKIAEYIASHLRESGIQVDIQDLH 38 (175)
T ss_pred ceEEEEecCCCcHHHHHHHHHHHhhhcCCeeeeeehh
Confidence 57999999995543 3467777888888777766543
No 349
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=24.71 E-value=10 Score=28.99 Aligned_cols=36 Identities=17% Similarity=0.105 Sum_probs=25.3
Q ss_pred CCCceEEeecChhHHHHHHHHHHhccCCCCCCceeE
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARAGQADVSPLRVAG 47 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~p~~~~~ 47 (186)
+.++..|.|.|+||.-++.-+-...+.-....++++
T Consensus 174 ~Ak~alLsGcSAGGLa~iLhCD~Fr~~lp~~t~VKC 209 (402)
T KOG4287|consen 174 NAKQALLSGCSAGGLASILHCDEFRELLPPTTKVKC 209 (402)
T ss_pred HHHHHHhhcCCccchhheeehHHHHhhCCCCceeEE
Confidence 677889999999998888777666554322334554
No 350
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=24.61 E-value=1.5e+02 Score=18.44 Aligned_cols=36 Identities=22% Similarity=0.252 Sum_probs=24.3
Q ss_pred CEEEEeeCcccccccHHHHHHHHHHCCCceEEEEeC
Q 038786 114 PFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSP 149 (186)
Q Consensus 114 P~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~ 149 (186)
|-+++.|+-........+..+.+.+.|..++..-.+
T Consensus 53 peiliiGTG~~~~~~~~~~~~~l~~~gI~vE~m~T~ 88 (109)
T cd00248 53 PDILLIGTGAEIAFLPRALRAALRAAGIGVEVMSTG 88 (109)
T ss_pred CCEEEEcCCCCCCcCCHHHHHHHHHcCCeEEEeCcH
Confidence 556777777755445567788888888776655443
No 351
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=24.04 E-value=73 Score=23.60 Aligned_cols=22 Identities=18% Similarity=0.332 Sum_probs=17.3
Q ss_pred CCceEEee-cChhHHHHHHHHHH
Q 038786 13 FQRVFLIG-DSSGGNVVHEVAAR 34 (186)
Q Consensus 13 ~~~i~l~G-~S~GG~la~~~a~~ 34 (186)
.++|.|+| -+||+.+|..++..
T Consensus 3 ~~kIaViGaG~mG~~iA~~la~~ 25 (287)
T PRK08293 3 IKNVTVAGAGVLGSQIAFQTAFH 25 (287)
T ss_pred ccEEEEECCCHHHHHHHHHHHhc
Confidence 46788887 67999999888754
No 352
>KOG2800 consensus Conserved developmentally regulated protein [General function prediction only]
Probab=23.63 E-value=42 Score=25.41 Aligned_cols=30 Identities=27% Similarity=0.482 Sum_probs=23.3
Q ss_pred cccccccccCCCCceEEeecChhHHHHHHH
Q 038786 2 RENNWLTEHVDFQRVFLIGDSSGGNVVHEV 31 (186)
Q Consensus 2 ~~l~~l~~~~~~~~i~l~G~S~GG~la~~~ 31 (186)
.|+.|-.++++.+.+.++|.|-|-.+--.+
T Consensus 245 Sa~s~~~~nlnldt~~ligfSkgcVvlnq~ 274 (389)
T KOG2800|consen 245 SAISWWRENLNLDTLNLIGFSKGCVVLNQS 274 (389)
T ss_pred hhhccCCcccCccceeeeccccceEeehhh
Confidence 467788888888889999999987544333
No 353
>PF01339 CheB_methylest: CheB methylesterase; InterPro: IPR000673 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the signal transduction response regulator CheB involved in chemotaxis. CheB methylesterase is responsible for removing the methyl group from the gamma-glutamyl methyl ester residues in the methyl-accepting chemotaxis proteins (MCP). The enzyme catalyses the reaction: protein L-glutamate O-methyl ester and water is converted to protein L-glutamate and methanol. CheB is regulated through phosphorylation by CheA. The N-terminal region of the protein is similar to that of other regulatory components of sensory transduction systems. The Myxococcus xanthus FrzG protein also belongs to this family, and is required for the normal aggregation of cells during fruiting body formation.; GO: 0000156 two-component response regulator activity, 0008984 protein-glutamate methylesterase activity, 0000160 two-component signal transduction system (phosphorelay), 0006935 chemotaxis, 0005737 cytoplasm; PDB: 1CHD_A 1A2O_B 3SFT_A.
Probab=23.61 E-value=61 Score=22.32 Aligned_cols=20 Identities=35% Similarity=0.410 Sum_probs=14.8
Q ss_pred eEEeecChhHHHHHHHHHHh
Q 038786 16 VFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 16 i~l~G~S~GG~la~~~a~~~ 35 (186)
|+++|-|+||--++.-....
T Consensus 1 vV~IGaSaGG~~al~~il~~ 20 (182)
T PF01339_consen 1 VVAIGASAGGPEALQEILSA 20 (182)
T ss_dssp EEEEEE-TTHHHHHCCCHCC
T ss_pred CEEEEeCCCCHHHHHHHHHH
Confidence 68899999998887666543
No 354
>PF10432 bact-PGI_C: Bacterial phospho-glucose isomerase C-terminal region; InterPro: IPR019490 Phosphoglucose isomerase (PGI) catalyses the interconversion of phosphoglucose and phosphofructose, and is a component of many sugar metabolic pathways. In some archaea and bacteria PGI activity occurs via a bifunctional enzyme that also exhibits phosphomannose isomerase (PMI) activity. Though not closely related to eukaryotic PGIs, the bifunctional enzyme is similar enough that the sequence includes the cluster of threonines and serines that forms the sugar phosphate-binding site in conventional PGI. This entry represents the C-terminal half of the bifunctional PGI/PMI enzyme, which contains many of the active catalytic site residues. The enzyme is thought to use the same catalytic mechanisms for both glucose ring-opening and isomerisation for the interconversion of glucose 6-phosphate to fructose 6-phosphate [].; GO: 0004347 glucose-6-phosphate isomerase activity, 0004476 mannose-6-phosphate isomerase activity; PDB: 1TZB_A 1X9H_A 1TZC_B 1X9I_A 1WIW_A.
Probab=23.57 E-value=1.1e+02 Score=20.49 Aligned_cols=41 Identities=10% Similarity=0.066 Sum_probs=28.2
Q ss_pred EEEEeeCcccccccHHHHHHHHHHC-CCceEEEEeCCCCcccc
Q 038786 115 FLLCVAGNDLIKDTEMEYYEAMKKA-GKDVELLVSPGMGHSFY 156 (186)
Q Consensus 115 ~li~~g~~D~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~H~~~ 156 (186)
+-+++|. +........+...+.+. +..+-...+|...|...
T Consensus 19 ~Pvi~~~-~~~~~vA~R~k~qlnEnAK~~A~~~~lPE~~Hn~i 60 (155)
T PF10432_consen 19 IPVIYGS-PLYAAVARRWKQQLNENAKYPAFAAVLPEANHNEI 60 (155)
T ss_dssp EEEEEEC-GCGCHHHHHHHHHHHHTT----EEEEETCHHHCHH
T ss_pred CcEEEEC-ccchHHHHHHHHHHHHHhCCccchhcchhhhhhhh
Confidence 3466777 77766778888888774 66788888999888654
No 355
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=23.18 E-value=66 Score=23.98 Aligned_cols=18 Identities=33% Similarity=0.523 Sum_probs=15.0
Q ss_pred CCCCceEEeecChhHHHH
Q 038786 11 VDFQRVFLIGDSSGGNVV 28 (186)
Q Consensus 11 ~~~~~i~l~G~S~GG~la 28 (186)
.++++++++|+|+|+.-+
T Consensus 209 ~~~~~vI~vGDs~~Dl~m 226 (277)
T TIGR01544 209 KDRSNIILLGDSQGDLRM 226 (277)
T ss_pred CCcceEEEECcChhhhhH
Confidence 467899999999998655
No 356
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=22.65 E-value=1.1e+02 Score=18.73 Aligned_cols=36 Identities=25% Similarity=0.263 Sum_probs=23.1
Q ss_pred ccCCCCceEEeecChhHHHHHH--HHHHhccCCCCCCceeEEEe
Q 038786 9 EHVDFQRVFLIGDSSGGNVVHE--VAARAGQADVSPLRVAGAIP 50 (186)
Q Consensus 9 ~~~~~~~i~l~G~S~GG~la~~--~a~~~~~~~~~p~~~~~~vl 50 (186)
+.....+++++|+|--.=.-.+ ++.++ |.+|.++.+
T Consensus 60 ~~fP~~kfiLIGDsgq~DpeiY~~ia~~~------P~~i~ai~I 97 (100)
T PF09949_consen 60 RDFPERKFILIGDSGQHDPEIYAEIARRF------PGRILAIYI 97 (100)
T ss_pred HHCCCCcEEEEeeCCCcCHHHHHHHHHHC------CCCEEEEEE
Confidence 3334568999999977654433 33444 778887653
No 357
>PF13676 TIR_2: TIR domain; PDB: 3H16_B 3UB4_A 2Y92_A 3UB3_A 3UB2_A.
Probab=22.57 E-value=1.8e+02 Score=17.27 Aligned_cols=26 Identities=15% Similarity=0.179 Sum_probs=19.4
Q ss_pred EEEEeeCcccccccHHHHHHHHHHCCCc
Q 038786 115 FLLCVAGNDLIKDTEMEYYEAMKKAGKD 142 (186)
Q Consensus 115 ~li~~g~~D~~~~~~~~~~~~l~~~~~~ 142 (186)
++|.|+..|.- ....+.+.|...|.+
T Consensus 1 VFIS~~~~D~~--~a~~l~~~L~~~g~~ 26 (102)
T PF13676_consen 1 VFISYSSEDRE--FAERLAERLESAGIR 26 (102)
T ss_dssp EEEEEEGGGCC--CHHHHHHHHHHTT--
T ss_pred eEEEecCCcHH--HHHHHHHHHhhcCCE
Confidence 57889999844 678889999887753
No 358
>COG3621 Patatin [General function prediction only]
Probab=22.05 E-value=62 Score=24.86 Aligned_cols=20 Identities=25% Similarity=0.317 Sum_probs=17.0
Q ss_pred EEeecChhHHHHHHHHHHhc
Q 038786 17 FLIGDSSGGNVVHEVAARAG 36 (186)
Q Consensus 17 ~l~G~S~GG~la~~~a~~~~ 36 (186)
++.|-|-||.+++.+++...
T Consensus 45 l~~GTSiGgilal~La~~ks 64 (394)
T COG3621 45 LIGGTSIGGILALGLALGKS 64 (394)
T ss_pred eecCccHHHHHHHHHhcCCC
Confidence 46789999999999998654
No 359
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=21.61 E-value=44 Score=23.43 Aligned_cols=23 Identities=30% Similarity=0.345 Sum_probs=18.4
Q ss_pred CceEEeecCh----hHHHHHHHHHHhc
Q 038786 14 QRVFLIGDSS----GGNVVHEVAARAG 36 (186)
Q Consensus 14 ~~i~l~G~S~----GG~la~~~a~~~~ 36 (186)
-.++++|+|. |+.++..+|.+.+
T Consensus 109 p~lVL~~~t~~~~~grdlaprlAarLg 135 (202)
T cd01714 109 VDLILTGKQSIDGDTGQVGPLLAELLG 135 (202)
T ss_pred CCEEEEcCCcccCCcCcHHHHHHHHhC
Confidence 3588888888 8889999988874
No 360
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=21.45 E-value=3.6e+02 Score=20.23 Aligned_cols=61 Identities=16% Similarity=0.105 Sum_probs=37.7
Q ss_pred EEEEeeCcccccccHHHHHHHHHHCCCceEEEEeCCCCccc-cccccccCCCcchhHHHHHHHHHHHHHhh
Q 038786 115 FLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVSPGMGHSF-YLDKIAVDMDPNTAAQTCGLFQGIAEFMR 184 (186)
Q Consensus 115 ~li~~g~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~-~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 184 (186)
++++||-.|... .-..++..|...|-.+-..-.+|.|..- .... .......+..++..|++
T Consensus 37 Vvl~HG~~Eh~~-ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg--------~~~~f~~~~~dl~~~~~ 98 (298)
T COG2267 37 VVLVHGLGEHSG-RYEELADDLAARGFDVYALDLRGHGRSPRGQRG--------HVDSFADYVDDLDAFVE 98 (298)
T ss_pred EEEecCchHHHH-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcC--------CchhHHHHHHHHHHHHH
Confidence 799999999764 2356788888888766666666554443 1111 01335566666666654
No 361
>PF06658 DUF1168: Protein of unknown function (DUF1168); InterPro: IPR009548 This family consists of several hypothetical eukaryotic proteins of unknown function.
Probab=21.42 E-value=26 Score=23.15 Aligned_cols=14 Identities=21% Similarity=0.166 Sum_probs=10.1
Q ss_pred EEeecChhHHHHHH
Q 038786 17 FLIGDSSGGNVVHE 30 (186)
Q Consensus 17 ~l~G~S~GG~la~~ 30 (186)
.|+|.|+|++-.=.
T Consensus 25 NV~GSSAGAGSGeF 38 (142)
T PF06658_consen 25 NVQGSSAGAGSGEF 38 (142)
T ss_pred cccccccccCccHH
Confidence 58899999874433
No 362
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=21.41 E-value=1.7e+02 Score=19.72 Aligned_cols=21 Identities=29% Similarity=0.341 Sum_probs=17.9
Q ss_pred ceEEeecChhHHHHHHHHHHh
Q 038786 15 RVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 15 ~i~l~G~S~GG~la~~~a~~~ 35 (186)
+|+|+|-+.+|..++..+.+.
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~~ 21 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELARP 21 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHHT
T ss_pred CEEEEecHHHHHHHHHHHhcC
Confidence 589999999999888888744
No 363
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=21.31 E-value=1.7e+02 Score=18.18 Aligned_cols=24 Identities=21% Similarity=0.362 Sum_probs=20.9
Q ss_pred CCCceEEeecChhHHHHHHHHHHh
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
+.++|+++|...-..+|..++.+.
T Consensus 4 ~~~~i~i~G~G~s~~~A~~~~~~l 27 (131)
T PF01380_consen 4 KAKRIYIYGSGSSYGVAQYAALKL 27 (131)
T ss_dssp TSSEEEEEESTHHHHHHHHHHHHH
T ss_pred CCCEEEEEEcchHHHHHHHHHHHH
Confidence 567999999999999999888776
No 364
>COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]
Probab=20.91 E-value=1.2e+02 Score=23.57 Aligned_cols=24 Identities=25% Similarity=0.405 Sum_probs=20.7
Q ss_pred CCCceEEeecChhHHHHHHHHHHh
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
...+++++|-|.||--|+......
T Consensus 155 ~~~~iV~IGaStGGp~AL~~il~~ 178 (350)
T COG2201 155 AARKIVAIGASTGGPAALRAVLPA 178 (350)
T ss_pred CCccEEEEEeCCCCHHHHHHHHHh
Confidence 456899999999999999888766
No 365
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=20.44 E-value=4.6e+02 Score=21.12 Aligned_cols=24 Identities=17% Similarity=0.176 Sum_probs=21.0
Q ss_pred CCCceEEeecChhHHHHHHHHHHh
Q 038786 12 DFQRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 12 ~~~~i~l~G~S~GG~la~~~a~~~ 35 (186)
|++++++.+.+.+++-++..++..
T Consensus 145 dP~~~Vv~~G~T~ane~l~fcLad 168 (471)
T KOG0256|consen 145 DPERVVVTNGATSANETLMFCLAD 168 (471)
T ss_pred CccceEEecccchhhHHHHHHhcC
Confidence 899999999999999888888744
No 366
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=20.31 E-value=1.1e+02 Score=24.17 Aligned_cols=22 Identities=18% Similarity=0.468 Sum_probs=18.7
Q ss_pred CceEEeecChhHHHHHHHHHHh
Q 038786 14 QRVFLIGDSSGGNVVHEVAARA 35 (186)
Q Consensus 14 ~~i~l~G~S~GG~la~~~a~~~ 35 (186)
.+|+|+|-+.||.-|+..+.+.
T Consensus 2 ~~VVIIGgG~aG~~aA~~l~~~ 23 (438)
T PRK13512 2 PKIIVVGAVAGGATCASQIRRL 23 (438)
T ss_pred CeEEEECCcHHHHHHHHHHHhh
Confidence 5899999999999888777654
No 367
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=20.28 E-value=81 Score=24.89 Aligned_cols=18 Identities=22% Similarity=0.230 Sum_probs=15.6
Q ss_pred eEEeecChhHHHHHHHHH
Q 038786 16 VFLIGDSSGGNVVHEVAA 33 (186)
Q Consensus 16 i~l~G~S~GG~la~~~a~ 33 (186)
-.+.|-|+|+.+|..++.
T Consensus 43 ~~iaGaSAGAL~aa~~a~ 60 (405)
T cd07223 43 RRIYGSSSGALNAVSIVC 60 (405)
T ss_pred CeeeeeCHHHHHHHHHHh
Confidence 458999999999998875
Done!