Query 038787
Match_columns 153
No_of_seqs 146 out of 440
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 04:48:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038787.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038787hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wff_A Riken cDNA 2810002D23 p 100.0 1.3E-30 4.6E-35 187.0 1.1 61 87-147 22-83 (85)
2 1wfh_A Zinc finger (AN1-like) 99.9 1.6E-27 5.5E-32 163.0 1.5 53 86-138 11-63 (64)
3 1wg2_A Zinc finger (AN1-like) 99.9 6.1E-27 2.1E-31 160.2 1.8 52 86-137 11-62 (64)
4 1wfl_A Zinc finger protein 216 99.9 4.9E-26 1.7E-30 159.5 4.8 51 86-136 21-71 (74)
5 1wfp_A Zinc finger (AN1-like) 99.9 6.9E-26 2.4E-30 158.8 2.8 52 86-137 21-72 (74)
6 1x4w_A Hypothetical protein FL 99.9 8.6E-26 2.9E-30 155.8 -0.1 52 86-137 11-65 (67)
7 2kzy_A ZNF216-A20, zfand5 prot 99.7 1.2E-17 4E-22 113.5 4.5 37 2-38 12-48 (62)
8 2c7n_A Rabex-5, GEF 1, RAB gua 99.6 1.6E-16 5.4E-21 111.0 2.7 32 2-33 15-46 (74)
9 3oj3_I Tumor necrosis factor a 99.6 5.2E-16 1.8E-20 100.6 2.6 29 4-32 19-48 (49)
10 1wfe_A Riken cDNA 2310008M20 p 99.3 1.5E-13 5.1E-18 98.4 1.5 58 87-153 22-82 (86)
11 1x4v_A Hypothetical protein LO 99.3 4E-13 1.4E-17 91.3 2.0 40 87-127 9-51 (63)
12 1wys_A Riken cDNA 2310008M20 p 99.3 1.2E-12 4E-17 91.8 1.6 42 89-131 13-57 (75)
13 2eqe_A Tumor necrosis factor, 97.9 7.2E-06 2.4E-10 52.6 2.7 28 4-31 16-44 (48)
14 1vfy_A Phosphatidylinositol-3- 92.9 0.05 1.7E-06 36.5 2.1 28 91-118 12-42 (73)
15 2yw8_A RUN and FYVE domain-con 92.0 0.065 2.2E-06 36.7 1.8 28 90-117 19-49 (82)
16 1joc_A EEA1, early endosomal a 91.5 0.068 2.3E-06 39.5 1.6 28 90-117 69-99 (125)
17 1wfk_A Zinc finger, FYVE domai 91.5 0.1 3.5E-06 36.4 2.5 28 90-117 9-39 (88)
18 3zyq_A Hepatocyte growth facto 91.3 0.16 5.6E-06 40.5 3.8 28 90-117 164-194 (226)
19 1x4u_A Zinc finger, FYVE domai 91.2 0.11 3.8E-06 35.6 2.3 28 90-117 14-44 (84)
20 1z2q_A LM5-1; membrane protein 90.8 0.11 3.7E-06 35.7 2.0 28 90-117 21-51 (84)
21 1dvp_A HRS, hepatocyte growth 90.7 0.2 6.9E-06 39.5 3.7 28 90-117 161-191 (220)
22 3t7l_A Zinc finger FYVE domain 90.1 0.13 4.4E-06 35.9 1.9 28 90-117 20-50 (90)
23 1y02_A CARP2, FYVE-ring finger 87.9 0.2 6.9E-06 37.1 1.7 41 90-130 19-65 (120)
24 4b6d_A RAC GTPase-activating p 86.7 0.22 7.7E-06 32.6 1.2 24 89-112 18-44 (61)
25 2vrw_B P95VAV, VAV1, proto-onc 84.4 0.41 1.4E-05 40.2 2.0 41 89-130 356-400 (406)
26 2eqf_A Tumor necrosis factor, 80.1 0.86 2.9E-05 28.6 1.8 24 6-29 13-36 (46)
27 3mpx_A FYVE, rhogef and PH dom 78.8 0.4 1.4E-05 40.3 0.0 28 90-117 375-405 (434)
28 3c5k_A HD6, histone deacetylas 74.3 1.4 4.9E-05 31.8 1.9 30 90-123 24-54 (109)
29 1ptq_A Protein kinase C delta 72.8 1.9 6.5E-05 26.0 1.9 24 89-112 10-37 (50)
30 2enz_A NPKC-theta, protein kin 70.9 4.6 0.00016 25.9 3.6 25 89-113 22-50 (65)
31 2eqg_A Tumor necrosis factor, 68.2 3.3 0.00011 26.2 2.3 27 5-31 13-40 (49)
32 2yuu_A NPKC-delta, protein kin 67.2 2.7 9.2E-05 28.4 1.9 25 89-113 27-55 (83)
33 1kbe_A Kinase suppressor of RA 67.0 2.1 7.1E-05 26.9 1.2 22 91-113 15-37 (49)
34 2fnf_X Putative RAS effector N 64.2 3.3 0.00011 27.6 1.8 26 88-113 33-59 (72)
35 3uej_A NPKC-delta, protein kin 63.5 3.7 0.00013 26.3 1.9 24 89-112 19-46 (65)
36 1faq_A RAF-1; transferase, ser 63.1 2.3 8E-05 25.8 0.9 24 89-113 13-37 (52)
37 2ysj_A Tripartite motif-contai 62.4 7.6 0.00026 23.7 3.3 25 90-115 20-44 (63)
38 1rfh_A RAS association (ralgds 61.9 2.9 9.7E-05 26.6 1.2 24 89-112 21-45 (59)
39 1r79_A Diacylglycerol kinase, 61.7 4 0.00014 28.2 2.0 23 90-112 38-65 (84)
40 3ky9_A Proto-oncogene VAV; cal 60.6 3.9 0.00013 36.2 2.2 39 89-128 528-570 (587)
41 2gmg_A Hypothetical protein PF 60.5 3.8 0.00013 29.9 1.7 26 99-126 62-88 (105)
42 2ysl_A Tripartite motif-contai 57.5 10 0.00034 23.6 3.2 26 90-116 20-45 (73)
43 2eli_A Protein kinase C alpha 57.4 8.9 0.00031 25.9 3.1 43 89-131 27-73 (85)
44 1y8f_A UNC-13 homolog A, MUNC1 55.6 5.9 0.0002 25.5 1.9 24 89-112 23-50 (66)
45 2enn_A NPKC-theta, protein kin 53.2 5.1 0.00018 26.6 1.3 25 89-113 33-61 (77)
46 3h0g_L DNA-directed RNA polyme 52.6 5.8 0.0002 26.4 1.5 25 89-113 20-48 (63)
47 2co8_A NEDD9 interacting prote 52.3 9.7 0.00033 24.9 2.6 29 91-119 43-73 (82)
48 2db6_A SH3 and cysteine rich d 52.1 4.6 0.00016 26.7 0.9 25 89-113 27-55 (74)
49 1ef4_A Subunit N, DNA-directed 51.5 4.1 0.00014 26.5 0.6 13 90-102 3-15 (55)
50 1twf_J DNA-directed RNA polyme 50.1 5.1 0.00017 27.3 0.9 13 90-102 4-16 (70)
51 1z60_A TFIIH basal transcripti 49.2 4.9 0.00017 26.2 0.7 24 92-115 17-42 (59)
52 2lce_A B-cell lymphoma 6 prote 48.6 11 0.00037 23.0 2.2 27 89-115 16-57 (74)
53 1wd2_A Ariadne-1 protein homol 47.6 7.9 0.00027 24.9 1.5 30 89-118 5-41 (60)
54 2d8t_A Dactylidin, ring finger 45.2 16 0.00054 22.9 2.7 47 90-137 15-64 (71)
55 1x68_A FHL5 protein; four-and- 43.7 13 0.00044 23.7 2.1 29 91-119 36-64 (76)
56 3f6q_B LIM and senescent cell 43.5 6.7 0.00023 24.3 0.6 27 91-117 40-66 (72)
57 4ayb_N DNA-directed RNA polyme 41.8 7.3 0.00025 26.2 0.6 13 90-102 4-16 (66)
58 4gzn_C ZFP-57, zinc finger pro 41.4 10 0.00035 23.7 1.3 27 89-115 3-44 (60)
59 4gne_A Histone-lysine N-methyl 40.7 15 0.0005 26.4 2.2 27 91-120 59-86 (107)
60 2ecv_A Tripartite motif-contai 40.0 28 0.00094 21.8 3.3 26 90-116 19-44 (85)
61 2yur_A Retinoblastoma-binding 39.8 26 0.00088 22.1 3.1 27 89-116 14-41 (74)
62 3j21_g 50S ribosomal protein L 39.3 7.5 0.00026 24.8 0.4 24 89-112 13-37 (51)
63 2elq_A Zinc finger protein 406 38.6 13 0.00045 19.2 1.3 12 103-114 8-20 (36)
64 2kwq_A Protein MCM10 homolog; 38.3 13 0.00045 26.3 1.6 21 103-123 47-67 (92)
65 2ct2_A Tripartite motif protei 38.1 27 0.00094 22.2 3.1 26 90-115 15-43 (88)
66 2d8x_A Protein pinch; LIM doma 38.0 9.1 0.00031 23.9 0.6 27 91-117 32-58 (70)
67 2cot_A Zinc finger protein 435 36.3 38 0.0013 20.5 3.4 26 89-114 17-57 (77)
68 2ecj_A Tripartite motif-contai 35.7 29 0.001 20.3 2.7 25 90-115 15-39 (58)
69 1vd4_A Transcription initiatio 35.3 13 0.00043 22.4 1.0 26 89-114 13-50 (62)
70 2csz_A Synaptotagmin-like prot 34.1 19 0.00065 24.7 1.8 31 89-119 24-58 (76)
71 1nyp_A Pinch protein; LIM doma 33.8 12 0.0004 23.1 0.6 27 91-117 32-58 (66)
72 1x64_A Alpha-actinin-2 associa 33.6 11 0.00039 24.8 0.6 25 92-116 53-77 (89)
73 1x61_A Thyroid receptor intera 33.2 13 0.00043 23.3 0.7 27 91-117 34-60 (72)
74 2ehe_A Four and A half LIM dom 33.0 24 0.00081 22.6 2.1 29 91-119 44-72 (82)
75 1x4l_A Skeletal muscle LIM-pro 32.9 12 0.00043 23.4 0.7 27 91-117 36-62 (72)
76 3uk3_C Zinc finger protein 217 32.9 21 0.00073 20.2 1.7 25 90-114 4-43 (57)
77 1g47_A Pinch protein; LIM doma 32.4 13 0.00043 23.5 0.6 27 91-117 40-66 (77)
78 2m0d_A Zinc finger and BTB dom 32.3 14 0.00049 17.6 0.7 11 104-114 3-14 (30)
79 2csy_A Zinc finger protein 183 32.1 34 0.0012 21.8 2.7 25 90-115 15-39 (81)
80 3j21_i 50S ribosomal protein L 32.0 18 0.0006 25.2 1.4 30 87-117 32-67 (83)
81 3iz5_m 60S ribosomal protein L 32.0 18 0.00062 25.6 1.4 30 87-117 33-68 (92)
82 2adr_A ADR1; transcription reg 31.9 23 0.0008 20.3 1.8 11 104-114 30-41 (60)
83 1bbo_A Human enhancer-binding 31.7 24 0.00083 19.9 1.8 11 104-114 29-40 (57)
84 2kvf_A Zinc finger and BTB dom 31.7 16 0.00054 17.5 0.8 12 104-115 3-15 (28)
85 2ecw_A Tripartite motif-contai 31.5 41 0.0014 21.0 3.0 26 90-116 19-44 (85)
86 2kvh_A Zinc finger and BTB dom 31.4 16 0.00053 17.5 0.8 11 104-114 3-14 (27)
87 1znf_A 31ST zinc finger from X 31.4 13 0.00045 17.6 0.5 11 105-115 2-13 (27)
88 1e4u_A Transcriptional repress 31.1 15 0.0005 24.4 0.8 26 90-115 11-39 (78)
89 2elx_A Zinc finger protein 406 30.9 19 0.00066 18.1 1.1 11 104-114 7-18 (35)
90 2uzg_A Ubiquitin carboxyl-term 30.8 26 0.0009 24.3 2.1 31 90-123 25-58 (97)
91 2m0f_A Zinc finger and BTB dom 30.7 15 0.00053 17.4 0.7 10 105-114 3-13 (29)
92 2zet_C Melanophilin; complex, 30.6 22 0.00074 27.0 1.8 30 89-118 67-100 (153)
93 1srk_A Zinc finger protein ZFP 30.4 20 0.00067 18.2 1.1 11 104-114 7-18 (35)
94 2kvg_A Zinc finger and BTB dom 30.1 16 0.00053 17.7 0.6 11 104-114 3-14 (27)
95 3jyw_9 60S ribosomal protein L 30.1 17 0.00058 24.7 1.0 29 87-116 23-57 (72)
96 1x4k_A Skeletal muscle LIM-pro 30.0 15 0.00052 22.8 0.7 27 91-117 34-60 (72)
97 1yop_A KTI11P; zinc finger, me 30.0 14 0.00049 25.6 0.6 13 103-115 22-34 (83)
98 2ea6_A Ring finger protein 4; 29.9 30 0.001 20.8 2.1 26 90-115 15-46 (69)
99 1ard_A Yeast transcription fac 29.4 14 0.00048 17.6 0.4 10 105-114 3-13 (29)
100 2elo_A Zinc finger protein 406 29.3 18 0.00063 18.6 0.9 10 104-113 9-19 (37)
101 2lvu_A Zinc finger and BTB dom 35.0 12 0.0004 17.8 0.0 13 104-116 2-15 (26)
102 1x6e_A Zinc finger protein 24; 28.8 23 0.00077 21.4 1.3 26 89-114 13-53 (72)
103 1wyh_A SLIM 2, skeletal muscle 28.6 17 0.00057 22.6 0.7 27 91-117 34-60 (72)
104 1x62_A C-terminal LIM domain p 28.5 10 0.00035 24.5 -0.4 26 92-117 43-68 (79)
105 2cu8_A Cysteine-rich protein 2 28.4 24 0.00084 22.2 1.5 25 91-115 37-61 (76)
106 1a7i_A QCRP2 (LIM1); LIM domai 28.4 17 0.00057 23.4 0.7 27 91-117 35-61 (81)
107 2djb_A Polycomb group ring fin 28.3 41 0.0014 20.9 2.6 25 90-115 15-40 (72)
108 1zbd_B Rabphilin-3A; G protein 28.3 28 0.00096 25.7 2.0 30 89-118 54-87 (134)
109 2jr7_A DPH3 homolog; DESR1, CS 28.1 16 0.00056 25.6 0.6 12 102-113 21-32 (89)
110 2row_A RHO-associated protein 27.7 16 0.00054 25.2 0.5 41 89-129 34-83 (84)
111 3l11_A E3 ubiquitin-protein li 27.7 24 0.00083 24.1 1.5 40 90-130 15-58 (115)
112 1p7a_A BF3, BKLF, kruppel-like 27.6 20 0.00068 18.4 0.8 8 91-98 12-19 (37)
113 2elp_A Zinc finger protein 406 27.4 26 0.00089 18.0 1.3 12 104-115 9-21 (37)
114 2elt_A Zinc finger protein 406 27.3 26 0.00089 17.7 1.3 10 104-113 9-19 (36)
115 2d8z_A Four and A half LIM dom 27.1 18 0.0006 22.4 0.6 27 91-117 32-58 (70)
116 1e0f_I Haemadin, factor IIA; c 27.1 35 0.0012 21.8 2.0 30 101-130 13-42 (57)
117 1jm7_B BARD1, BRCA1-associated 26.8 25 0.00086 24.2 1.4 38 90-129 22-62 (117)
118 1x63_A Skeletal muscle LIM-pro 26.8 19 0.00063 23.1 0.7 27 91-117 44-70 (82)
119 3cc2_Z 50S ribosomal protein L 26.7 19 0.00064 26.6 0.8 32 87-118 57-93 (116)
120 2dar_A PDZ and LIM domain prot 26.7 19 0.00063 23.7 0.7 10 91-100 26-35 (90)
121 1rik_A E6APC1 peptide; E6-bind 26.6 21 0.00072 17.0 0.8 11 105-115 3-14 (29)
122 1paa_A Yeast transcription fac 26.5 16 0.00056 17.6 0.3 11 105-115 3-14 (30)
123 2gqj_A Zinc finger protein KIA 26.5 18 0.00062 23.6 0.6 13 89-101 23-35 (98)
124 2m0e_A Zinc finger and BTB dom 26.4 17 0.00059 17.1 0.4 11 105-115 3-14 (29)
125 1klr_A Zinc finger Y-chromosom 26.3 16 0.00056 17.4 0.3 10 105-114 3-13 (30)
126 2elm_A Zinc finger protein 406 26.2 27 0.00094 18.2 1.2 12 104-115 9-21 (37)
127 2ee8_A Protein ODD-skipped-rel 26.2 53 0.0018 20.9 2.9 27 89-115 16-57 (106)
128 2ayj_A 50S ribosomal protein L 26.0 17 0.00058 23.7 0.4 23 89-111 18-41 (56)
129 2ctd_A Zinc finger protein 512 25.4 23 0.00079 23.5 1.0 11 90-100 34-44 (96)
130 2elv_A Zinc finger protein 406 25.3 26 0.0009 17.9 1.0 11 104-114 9-20 (36)
131 2lvt_A Zinc finger and BTB dom 31.1 15 0.00052 17.7 0.0 13 104-116 2-15 (29)
132 2ecn_A Ring finger protein 141 24.8 59 0.002 19.8 2.8 37 90-128 15-54 (70)
133 2ep4_A Ring finger protein 24; 24.7 63 0.0022 19.9 3.0 26 90-115 15-42 (74)
134 1wge_A Hypothetical protein 26 24.3 20 0.00069 24.8 0.5 12 102-113 28-39 (83)
135 1x5w_A Zinc finger protein 64, 24.1 33 0.0011 20.4 1.5 12 89-100 8-19 (70)
136 2els_A Zinc finger protein 406 23.8 27 0.00093 17.8 0.9 11 104-114 9-20 (36)
137 2ecy_A TNF receptor-associated 23.5 42 0.0014 20.4 1.9 26 90-116 15-40 (66)
138 2lv2_A Insulinoma-associated p 23.3 50 0.0017 21.8 2.4 27 89-115 27-68 (85)
139 1fv5_A First zinc finger of U- 23.3 24 0.00083 19.9 0.7 13 103-115 7-20 (36)
140 1vq8_Z 50S ribosomal protein L 23.3 26 0.00088 24.1 0.9 33 88-120 25-62 (83)
141 2egp_A Tripartite motif-contai 23.2 42 0.0014 20.9 1.9 47 90-137 12-68 (79)
142 3pfq_A PKC-B, PKC-beta, protei 23.1 54 0.0018 29.3 3.2 42 89-130 112-157 (674)
143 1ffk_W Ribosomal protein L37AE 23.0 31 0.0011 23.3 1.3 30 87-116 24-58 (73)
144 1twf_L ABC10-alpha, DNA-direct 23.0 22 0.00076 23.7 0.5 22 90-111 28-53 (70)
145 2d8y_A Eplin protein; LIM doma 23.0 18 0.00062 23.8 0.1 26 91-116 43-68 (91)
146 2epc_A Zinc finger protein 32; 22.9 36 0.0012 17.9 1.3 11 104-114 11-22 (42)
147 2ct7_A Ring finger protein 31; 22.9 31 0.0011 23.1 1.3 18 103-120 42-60 (86)
148 1iml_A CRIP, cysteine rich int 22.5 38 0.0013 21.3 1.6 25 91-115 28-52 (76)
149 1chc_A Equine herpes virus-1 r 22.5 40 0.0014 20.5 1.6 27 90-116 5-31 (68)
150 2epv_A Zinc finger protein 268 22.4 37 0.0012 18.3 1.3 11 104-114 12-23 (44)
151 4ayc_A E3 ubiquitin-protein li 22.3 35 0.0012 24.2 1.5 37 91-128 54-93 (138)
152 2egq_A FHL1 protein; LIM domai 22.3 22 0.00074 22.4 0.3 27 91-117 47-73 (77)
153 2ckl_B Ubiquitin ligase protei 22.2 32 0.0011 25.0 1.3 27 89-116 53-80 (165)
154 2elr_A Zinc finger protein 406 22.0 26 0.0009 17.7 0.6 8 91-98 10-17 (36)
155 2kiz_A E3 ubiquitin-protein li 21.6 72 0.0025 19.3 2.8 26 90-115 14-41 (69)
156 1x3h_A Leupaxin; paxillin fami 21.6 26 0.00089 22.2 0.6 27 91-117 42-68 (80)
157 3cxl_A N-chimerin; SH2, RHO-GA 21.3 40 0.0014 28.9 1.9 42 89-130 219-264 (463)
158 2lvr_A Zinc finger and BTB dom 26.8 20 0.00068 17.2 0.0 13 104-116 3-16 (30)
159 2y43_A E3 ubiquitin-protein li 21.3 33 0.0011 22.7 1.1 41 90-131 22-66 (99)
160 2ect_A Ring finger protein 126 21.0 83 0.0028 19.5 3.0 27 90-116 15-43 (78)
161 2ytp_A Zinc finger protein 484 20.7 41 0.0014 18.2 1.3 11 104-114 12-23 (46)
162 3iuf_A Zinc finger protein UBI 20.5 34 0.0012 19.2 1.0 13 103-115 6-19 (48)
163 1njq_A Superman protein; zinc- 20.5 36 0.0012 17.8 1.0 11 104-114 6-17 (39)
164 2eow_A Zinc finger protein 347 20.5 39 0.0014 18.2 1.2 11 104-114 12-23 (46)
165 2emi_A Zinc finger protein 484 20.5 42 0.0014 18.1 1.3 11 104-114 12-23 (46)
166 2epu_A Zinc finger protein 32; 20.5 38 0.0013 18.3 1.1 11 104-114 12-23 (45)
167 2ckl_A Polycomb group ring fin 20.4 38 0.0013 22.8 1.3 40 90-130 15-58 (108)
168 2el6_A Zinc finger protein 268 20.3 42 0.0014 18.2 1.3 11 104-114 12-23 (46)
169 2el5_A Zinc finger protein 268 20.2 43 0.0015 17.6 1.3 11 104-114 10-21 (42)
170 2ytf_A Zinc finger protein 268 20.1 43 0.0015 18.0 1.3 11 104-114 12-23 (46)
171 1va1_A Transcription factor SP 20.1 40 0.0014 17.5 1.1 12 103-114 7-21 (37)
172 2ytb_A Zinc finger protein 32; 20.0 30 0.001 18.2 0.6 11 104-114 11-22 (42)
No 1
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.96 E-value=1.3e-30 Score=186.97 Aligned_cols=61 Identities=36% Similarity=0.893 Sum_probs=58.3
Q ss_pred ccccccccccccccccc-ceeeecCceecCCCCCCCCCCCcccchhhhHHHHHHhCCceecc
Q 038787 87 SALEKRCEICDKKVGSI-ELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRAD 147 (153)
Q Consensus 87 ~~~~~rC~~C~kkvgl~-gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l~k~Np~v~~~ 147 (153)
++.++||+.|+|||||+ +|+||||++||+.|||||+|+|+||||++||++|+|+||+|+++
T Consensus 22 k~~~~rC~~C~kkvgl~~~f~CrCg~~FC~~HRy~e~H~C~fDyK~~gr~~iak~NPvV~a~ 83 (85)
T 1wff_A 22 KKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS 83 (85)
T ss_dssp CCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred cccCccchhhCCeecccCCeEcCCCCEecccCCCccCCCCcchhhHHHHHHHHHHCCeecCC
Confidence 45689999999999995 99999999999999999999999999999999999999999986
No 2
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.93 E-value=1.6e-27 Score=163.05 Aligned_cols=53 Identities=43% Similarity=1.011 Sum_probs=49.8
Q ss_pred ccccccccccccccccccceeeecCceecCCCCCCCCCCCcccchhhhHHHHH
Q 038787 86 TSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLV 138 (153)
Q Consensus 86 ~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l~ 138 (153)
++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|+
T Consensus 11 ~k~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~ 63 (64)
T 1wfh_A 11 PPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS 63 (64)
T ss_dssp CCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCCC
T ss_pred CCCcCCcChhhCCccCccCEEeecCCEeccccCCcccCCCCchhhHHHHHHhc
Confidence 34568999999999999999999999999999999999999999999999875
No 3
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.92 E-value=6.1e-27 Score=160.22 Aligned_cols=52 Identities=44% Similarity=1.074 Sum_probs=48.8
Q ss_pred ccccccccccccccccccceeeecCceecCCCCCCCCCCCcccchhhhHHHH
Q 038787 86 TSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETL 137 (153)
Q Consensus 86 ~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l 137 (153)
++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus 11 ~~~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HR~~e~H~C~fDyk~~gr~~~ 62 (64)
T 1wg2_A 11 PVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS 62 (64)
T ss_dssp CSCCSCSCTTTCCCCTTSCEECTTSCEECSSSCSSTTTTCCCCCSCSCCCSC
T ss_pred CCCcCCcChhhCCcccccCeEeecCCEecccCCCccccCCCcchhHHhHHHh
Confidence 3346799999999999999999999999999999999999999999999887
No 4
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.92 E-value=4.9e-26 Score=159.53 Aligned_cols=51 Identities=41% Similarity=1.004 Sum_probs=47.5
Q ss_pred ccccccccccccccccccceeeecCceecCCCCCCCCCCCcccchhhhHHH
Q 038787 86 TSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRET 136 (153)
Q Consensus 86 ~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~ 136 (153)
.+..++||+.|+|||||++|.||||++||+.|||+|+|+|+||||++||++
T Consensus 21 ~k~~~nRC~~CrKkvgL~gf~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~ 71 (74)
T 1wfl_A 21 PKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEASGP 71 (74)
T ss_dssp CCSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSSCC
T ss_pred CCCcCCcChhhCCcccccCeecCCCCEechhcCCCccCCCcchhhhhchhh
Confidence 344689999999999999999999999999999999999999999999874
No 5
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.91 E-value=6.9e-26 Score=158.80 Aligned_cols=52 Identities=48% Similarity=1.061 Sum_probs=49.1
Q ss_pred ccccccccccccccccccceeeecCceecCCCCCCCCCCCcccchhhhHHHH
Q 038787 86 TSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETL 137 (153)
Q Consensus 86 ~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l 137 (153)
+++.++||+.|+|+|||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus 21 ~k~~~~RC~~C~kkvgL~~f~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~~ 72 (74)
T 1wfp_A 21 PKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVASGPS 72 (74)
T ss_dssp TTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCCCCC
T ss_pred CcccCccchhhcCcccccceEeccCCEeccccCCCcCCCCcCchhHHhHHhh
Confidence 4557899999999999999999999999999999999999999999999876
No 6
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.90 E-value=8.6e-26 Score=155.76 Aligned_cols=52 Identities=33% Similarity=0.743 Sum_probs=48.1
Q ss_pred ccccccccccccccccccc---eeeecCceecCCCCCCCCCCCcccchhhhHHHH
Q 038787 86 TSALEKRCEICDKKVGSIE---LKCRCGHLYCGTHRYPKEHACTFDFKKFDRETL 137 (153)
Q Consensus 86 ~~~~~~rC~~C~kkvgl~g---f~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l 137 (153)
+++.++||+.|+|||||++ |+||||++||+.|||||+|+|+||||++||+.|
T Consensus 11 ~~~~~~rC~~C~kk~gL~~~egf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~~ 65 (67)
T 1x4w_A 11 KQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSGPS 65 (67)
T ss_dssp SCSCTTBCSSSCCBCCHHHHHHHCCSSSCCCCTTTCSTGGGTCSSCSSCSSCCCC
T ss_pred CCccCCcchhhCCeecccccCceEecCCCEehhccCCccccCCcccccccccccc
Confidence 4556899999999999984 999999999999999999999999999999865
No 7
>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A
Probab=99.69 E-value=1.2e-17 Score=113.50 Aligned_cols=37 Identities=46% Similarity=1.080 Sum_probs=32.6
Q ss_pred CccccccCCCCCCccccCCcchhhhhHHHHhhhcccc
Q 038787 2 TPPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGV 38 (153)
Q Consensus 2 ~p~lC~n~CGFfGs~at~~~CSkCy~~~~~~~~~~~~ 38 (153)
.|+||+|||||||||+|+||||||||+.+.+++++..
T Consensus 12 ~~~lC~ngCGFfGnpaT~nlCSkCyr~~~~~~~~~~~ 48 (62)
T 2kzy_A 12 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGR 48 (62)
T ss_dssp CCCBCTTCCSSBCCTTTTSCCHHHHHHHHHHHHHHCC
T ss_pred cccchhhCCCCcCChhhcCcCHHHHHHHHHhhhcccc
Confidence 4689999999999999999999999999877766543
No 8
>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B
Probab=99.61 E-value=1.6e-16 Score=111.03 Aligned_cols=32 Identities=38% Similarity=1.005 Sum_probs=26.9
Q ss_pred CccccccCCCCCCccccCCcchhhhhHHHHhh
Q 038787 2 TPPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQ 33 (153)
Q Consensus 2 ~p~lC~n~CGFfGs~at~~~CSkCy~~~~~~~ 33 (153)
.|+||+|||||||||+|+||||||||+.+.++
T Consensus 15 ~~~lC~ngCGFfGnpaT~nlCSkCyrd~~~k~ 46 (74)
T 2c7n_A 15 SDLLCKKGCGYYGNPAWQGFCSKCWREEYHKA 46 (74)
T ss_dssp ---CCTTCSSSCCCGGGTTCCHHHHHHHHHHH
T ss_pred cchhHHhCCCCCCChhhcCccHHHHHHHHHHH
Confidence 46799999999999999999999999986544
No 9
>3oj3_I Tumor necrosis factor alpha-induced protein 3; ubiquitin, zinc finger, zinc ION, protein binding-hydrolase; 2.50A {Homo sapiens} PDB: 3oj4_C
Probab=99.58 E-value=5.2e-16 Score=100.64 Aligned_cols=29 Identities=34% Similarity=1.000 Sum_probs=27.0
Q ss_pred cccc-cCCCCCCccccCCcchhhhhHHHHh
Q 038787 4 PLCA-KGCGFYGTKEHKSMCSKCYNDFLEE 32 (153)
Q Consensus 4 ~lC~-n~CGFfGs~at~~~CSkCy~~~~~~ 32 (153)
.||+ |||||||||+|+|||||||||++..
T Consensus 19 ~lC~~ngCGFfG~p~t~n~CSkCyre~~en 48 (49)
T 3oj3_I 19 SKCRKAGCVYFGTPENKGFCTLCFIEYREN 48 (49)
T ss_dssp CBCSSTTCSSBCBGGGTTBCHHHHHHHHHH
T ss_pred cccccCCCCCccCcccCCcchHHHHHHHHc
Confidence 6999 9999999999999999999998763
No 10
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.35 E-value=1.5e-13 Score=98.37 Aligned_cols=58 Identities=16% Similarity=0.363 Sum_probs=47.9
Q ss_pred ccccccccc--ccccccccceeee-cCceecCCCCCCCCCCCcccchhhhHHHHHHhCCceeccccccCC
Q 038787 87 SALEKRCEI--CDKKVGSIELKCR-CGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKLEGRI 153 (153)
Q Consensus 87 ~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~~~r~~l~k~Np~v~~~Kl~~kI 153 (153)
+..++||.. |+++ +|++|.|+ |+.+||..|||+++|+|+.. .+.+.++...+.++. +|
T Consensus 22 ~~~~~~C~~~~Ck~~-~~l~f~C~~C~~~FC~~HR~~e~H~C~~~-------~~~k~~~~~~~~l~~-~~ 82 (86)
T 1wfe_A 22 EHKSYSCSFKGCTDV-ELVAVICPYCEKNFCLRHRHQSDHDCEKL-------EVAKPRMAATQKLVR-SG 82 (86)
T ss_dssp CSCCEECCSTTCCCE-ESSCEECTTTCCEECGGGCSTGGGTCSSS-------SCCCSSCCCCCCCSS-CS
T ss_pred CCCCCCCCCcCCCCC-CccceECCCCCcccccccCCccCCCCCCC-------cccccchHHHHHHHH-HH
Confidence 345789999 9998 88999999 99999999999999999975 235667777766665 44
No 11
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=4e-13 Score=91.32 Aligned_cols=40 Identities=30% Similarity=0.851 Sum_probs=36.7
Q ss_pred ccccccccc--ccccccccceeee-cCceecCCCCCCCCCCCcc
Q 038787 87 SALEKRCEI--CDKKVGSIELKCR-CGHLYCGTHRYPKEHACTF 127 (153)
Q Consensus 87 ~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f 127 (153)
+...+||.. |+++ +|++|.|+ |+.+||..|||+|+|+|+-
T Consensus 9 k~~~~~Cs~~~Ck~~-~ll~f~C~~C~~~FC~~HR~~e~H~C~~ 51 (63)
T 1x4v_A 9 KIFTNKCERAGCRQR-EMMKLTCERCSRNFCIKHRHPLDHDCSG 51 (63)
T ss_dssp CTTCCCCCSTTCCCC-CSSCCBCSSSCCBCCHHHHSTTSSCCCS
T ss_pred cccCCCCCccCCCCC-CccceECCCCCcccCcccCCccCCcCCC
Confidence 346799999 9998 99999999 9999999999999999973
No 12
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=99.25 E-value=1.2e-12 Score=91.78 Aligned_cols=42 Identities=21% Similarity=0.694 Sum_probs=39.0
Q ss_pred ccccccc--ccccccccceeee-cCceecCCCCCCCCCCCcccchh
Q 038787 89 LEKRCEI--CDKKVGSIELKCR-CGHLYCGTHRYPKEHACTFDFKK 131 (153)
Q Consensus 89 ~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~ 131 (153)
..+||.. |+++ ++++|+|+ |+.+||..|||+++|+|+++++.
T Consensus 13 ~g~~Cs~~~C~~~-dflpf~C~~C~~~FC~~HR~~e~H~C~~~~~~ 57 (75)
T 1wys_A 13 IGQHCQVQHCRQR-DFLPFVCDGCSGIFCLEHRSKDSHGCSEVNVV 57 (75)
T ss_dssp CCCCCSCTTTCCC-SCCCEECTTTCCEECSTTCSSGGGTCCCCSSC
T ss_pred cCCCcCcccCCCc-cceeeECcccCcCcCcccCCccccCCCCCccc
Confidence 4689998 9988 89999999 99999999999999999999863
No 13
>2eqe_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=97.87 E-value=7.2e-06 Score=52.57 Aligned_cols=28 Identities=32% Similarity=0.974 Sum_probs=25.5
Q ss_pred cccc-cCCCCCCccccCCcchhhhhHHHH
Q 038787 4 PLCA-KGCGFYGTKEHKSMCSKCYNDFLE 31 (153)
Q Consensus 4 ~lC~-n~CGFfGs~at~~~CSkCy~~~~~ 31 (153)
..|. .||-|||+|.+.++|+.||.++..
T Consensus 16 ~kCRk~GC~fFGTpen~GFCTlCf~eyre 44 (48)
T 2eqe_A 16 SKCRKAGCVYFGTPENKGFCTLCFIEYSG 44 (48)
T ss_dssp SBCSSTTCCSBCCTTTTTCCHHHHHHHHS
T ss_pred chhhhcCCCcccCcccCceeeeehhhhhc
Confidence 4796 999999999999999999999864
No 14
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=92.85 E-value=0.05 Score=36.48 Aligned_cols=28 Identities=39% Similarity=1.057 Sum_probs=24.4
Q ss_pred ccccccccccccc--ceeee-cCceecCCCC
Q 038787 91 KRCEICDKKVGSI--ELKCR-CGHLYCGTHR 118 (153)
Q Consensus 91 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR 118 (153)
..|..|+++.+++ --.|| ||.+||+.+-
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs 42 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEHS 42 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGS
T ss_pred CcccCCCCccCCccccccCCCCCEEEccccc
Confidence 5899999999985 58999 9999998763
No 15
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=91.96 E-value=0.065 Score=36.68 Aligned_cols=28 Identities=36% Similarity=1.039 Sum_probs=24.2
Q ss_pred cccccccccccccc--ceeee-cCceecCCC
Q 038787 90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH 117 (153)
Q Consensus 90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 117 (153)
...|..|+++.+++ --.|| ||.+||+.+
T Consensus 19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C 49 (82)
T 2yw8_A 19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTC 49 (82)
T ss_dssp CCBCTTTCCBCBTTBCCEECTTTCCEECSGG
T ss_pred CCcccCcCCcccCccccccCCCCCCEEChHH
Confidence 45899999999985 48999 999999864
No 16
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=91.55 E-value=0.068 Score=39.48 Aligned_cols=28 Identities=29% Similarity=0.884 Sum_probs=24.2
Q ss_pred cccccccccccccc--ceeee-cCceecCCC
Q 038787 90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH 117 (153)
Q Consensus 90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 117 (153)
...|..|+++.+++ --.|| ||.+||+.+
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~C 99 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC 99 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred CCCCcCcCCccccccccccCCCCCeEEChHH
Confidence 46899999999985 48999 999999864
No 17
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=91.53 E-value=0.1 Score=36.38 Aligned_cols=28 Identities=36% Similarity=0.858 Sum_probs=24.5
Q ss_pred cccccccccccccc--ceeee-cCceecCCC
Q 038787 90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH 117 (153)
Q Consensus 90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 117 (153)
...|..|.++.+++ --.|| ||.+||+.+
T Consensus 9 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C 39 (88)
T 1wfk_A 9 ESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC 39 (88)
T ss_dssp CSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred CCCCcCcCCcccCccccccCCCCCCEEChhH
Confidence 46899999999985 48999 999999975
No 18
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=91.32 E-value=0.16 Score=40.52 Aligned_cols=28 Identities=32% Similarity=1.076 Sum_probs=24.5
Q ss_pred cccccccccccccc--ceeee-cCceecCCC
Q 038787 90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH 117 (153)
Q Consensus 90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 117 (153)
...|..|+++.+++ -..|| ||.+||+.+
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~C 194 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKC 194 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECTTT
T ss_pred CCCCcCcCCCCCccccccccCCCcCEeChhh
Confidence 46899999999985 58999 999999864
No 19
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.16 E-value=0.11 Score=35.56 Aligned_cols=28 Identities=21% Similarity=0.697 Sum_probs=24.4
Q ss_pred cccccccccccccc--ceeee-cCceecCCC
Q 038787 90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH 117 (153)
Q Consensus 90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 117 (153)
...|..|.++.+++ --.|| ||.+||+..
T Consensus 14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C 44 (84)
T 1x4u_A 14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRC 44 (84)
T ss_dssp CSSCSSSCCCCCSSSCCEECSSSCCEECTTT
T ss_pred CCcCcCcCCccccchhhhhhcCCCcEEChhh
Confidence 46899999999985 48999 999999875
No 20
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=90.78 E-value=0.11 Score=35.67 Aligned_cols=28 Identities=29% Similarity=0.756 Sum_probs=24.4
Q ss_pred cccccccccccccc--ceeee-cCceecCCC
Q 038787 90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH 117 (153)
Q Consensus 90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 117 (153)
...|..|+++.+++ --.|| ||.+||+.+
T Consensus 21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C 51 (84)
T 1z2q_A 21 APACNGCGCVFTTTVRRHHCRNCGYVLCGDC 51 (84)
T ss_dssp CCBCTTTCCBCCTTSCCEECTTTCCEECTGG
T ss_pred CCCCcCcCCccccchhcccccCCCcEEChHH
Confidence 56899999999985 48999 999999874
No 21
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=90.72 E-value=0.2 Score=39.51 Aligned_cols=28 Identities=29% Similarity=0.890 Sum_probs=24.5
Q ss_pred cccccccccccccc--ceeee-cCceecCCC
Q 038787 90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH 117 (153)
Q Consensus 90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 117 (153)
...|..|+++.+++ --+|| ||.+||+.+
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~C 191 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQC 191 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTT
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChHH
Confidence 46999999999985 48999 999999964
No 22
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=90.12 E-value=0.13 Score=35.85 Aligned_cols=28 Identities=32% Similarity=0.876 Sum_probs=24.2
Q ss_pred cccccccccccccc--ceeee-cCceecCCC
Q 038787 90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH 117 (153)
Q Consensus 90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 117 (153)
...|..|.++.+++ -..|| ||.+||+..
T Consensus 20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~C 50 (90)
T 3t7l_A 20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVC 50 (90)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred CCcCcCCCCcccchhhCccccCCCCEECCcc
Confidence 46899999999985 58999 999999864
No 23
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=87.85 E-value=0.2 Score=37.13 Aligned_cols=41 Identities=20% Similarity=0.470 Sum_probs=28.2
Q ss_pred cccccccccccccc--ceeee-cCceecCCC---CCCCCCCCcccch
Q 038787 90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH---RYPKEHACTFDFK 130 (153)
Q Consensus 90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H---Ry~e~H~C~fDyk 130 (153)
...|..|+++.+++ --.|| ||.+||+.. +.+..--|..=|.
T Consensus 19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~ 65 (120)
T 1y02_A 19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR 65 (120)
T ss_dssp -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence 46899999999885 58999 999998754 5555555665443
No 24
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=86.67 E-value=0.22 Score=32.57 Aligned_cols=24 Identities=33% Similarity=0.816 Sum_probs=20.0
Q ss_pred cccccccccccccc--cceeee-cCce
Q 038787 89 LEKRCEICDKKVGS--IELKCR-CGHL 112 (153)
Q Consensus 89 ~~~rC~~C~kkvgl--~gf~Cr-Cg~~ 112 (153)
++..|..|++++++ +|++|+ |+.+
T Consensus 18 ~~~~C~~Cg~~i~~gkq~~kC~dC~~~ 44 (61)
T 4b6d_A 18 KPESCVPCGKRIKFGKLSLKCRDCRVV 44 (61)
T ss_dssp SCEECTTTCCEECTTCEEEEESSSSCE
T ss_pred CCcccccccCEEEEeeEeeECCCCCCe
Confidence 46799999999987 799999 8643
No 25
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=84.41 E-value=0.41 Score=40.19 Aligned_cols=41 Identities=15% Similarity=0.276 Sum_probs=27.7
Q ss_pred cccccccccccc-cc--cceeee-cCceecCCCCCCCCCCCcccch
Q 038787 89 LEKRCEICDKKV-GS--IELKCR-CGHLYCGTHRYPKEHACTFDFK 130 (153)
Q Consensus 89 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk 130 (153)
.+..|..|++.+ |+ .|++|| ||.++|..-.-.=. .|.-+.-
T Consensus 356 ~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~-~C~~~~~ 400 (406)
T 2vrw_B 356 ETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP-PCGRHGQ 400 (406)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC-CC-----
T ss_pred CCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC-CCCCCch
Confidence 568999999988 66 799999 99999976432112 3876654
No 26
>2eqf_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=80.07 E-value=0.86 Score=28.59 Aligned_cols=24 Identities=21% Similarity=0.658 Sum_probs=21.4
Q ss_pred cccCCCCCCccccCCcchhhhhHH
Q 038787 6 CAKGCGFYGTKEHKSMCSKCYNDF 29 (153)
Q Consensus 6 C~n~CGFfGs~at~~~CSkCy~~~ 29 (153)
++-+|.-|||.-.+++|.-||.-.
T Consensus 13 ~apgCdhygN~kc~GyCNeC~~fK 36 (46)
T 2eqf_A 13 RAPACDHFGNAKCNGYCNECFQFK 36 (46)
T ss_dssp SSTTCCSCCBGGGTBSCHHHHHHH
T ss_pred cCcccccccchhhhhhhHHHHhhH
Confidence 478999999999999999999644
No 27
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=78.81 E-value=0.4 Score=40.34 Aligned_cols=28 Identities=21% Similarity=0.597 Sum_probs=0.0
Q ss_pred cccccccccccccc--ceeee-cCceecCCC
Q 038787 90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH 117 (153)
Q Consensus 90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 117 (153)
...|..|+++.+++ ...|| ||.+||+.+
T Consensus 375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~C 405 (434)
T 3mpx_A 375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRNC 405 (434)
T ss_dssp -------------------------------
T ss_pred CCcCCCcCCCCCCcchhhhcccCcCEeehhh
Confidence 46899999999985 68999 999998754
No 28
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=74.27 E-value=1.4 Score=31.77 Aligned_cols=30 Identities=33% Similarity=0.831 Sum_probs=23.3
Q ss_pred ccccccccccccccceeee-cCceecCCCCCCCCC
Q 038787 90 EKRCEICDKKVGSIELKCR-CGHLYCGTHRYPKEH 123 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H 123 (153)
..+|..|...-++ +.|- ||+++|+ ||+..|
T Consensus 24 ~~~C~~C~~~~~~--W~CL~CG~vgCg--r~~~~H 54 (109)
T 3c5k_A 24 TQPCGDCGTIQEN--WVCLSCYQVYCG--RYINGH 54 (109)
T ss_dssp TCCCTTTCCCSSE--EEETTTCCEEEC--TTTTCH
T ss_pred CCcCccccCCCCe--eeeeecCccccC--CCcChH
Confidence 4689999988665 5687 9999998 555554
No 29
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=72.84 E-value=1.9 Score=25.96 Aligned_cols=24 Identities=33% Similarity=0.728 Sum_probs=19.2
Q ss_pred cccccccccccc-cc--cceeee-cCce
Q 038787 89 LEKRCEICDKKV-GS--IELKCR-CGHL 112 (153)
Q Consensus 89 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~ 112 (153)
.+..|..|++.| || +|++|+ |+.+
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~ 37 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCEDCGMN 37 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CCCCcCCCCceeeccCCccCEeCCCCCe
Confidence 467899999988 44 799999 7654
No 30
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=70.93 E-value=4.6 Score=25.85 Aligned_cols=25 Identities=36% Similarity=0.687 Sum_probs=20.0
Q ss_pred cccccccccccc-cc--cceeee-cCcee
Q 038787 89 LEKRCEICDKKV-GS--IELKCR-CGHLY 113 (153)
Q Consensus 89 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 113 (153)
.+..|..|++.| || +|++|+ |+.+.
T Consensus 22 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~ 50 (65)
T 2enz_A 22 SPTFCEHCGTLLWGLARQGLKCDACGMNV 50 (65)
T ss_dssp SCCBCSSSCCBCCCSSSCSEEESSSCCEE
T ss_pred CCcCchhcChhheecCCcccccCCCCCcc
Confidence 468999999987 44 799999 87664
No 31
>2eqg_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=68.17 E-value=3.3 Score=26.19 Aligned_cols=27 Identities=19% Similarity=0.648 Sum_probs=22.8
Q ss_pred cc-ccCCCCCCccccCCcchhhhhHHHH
Q 038787 5 LC-AKGCGFYGTKEHKSMCSKCYNDFLE 31 (153)
Q Consensus 5 lC-~n~CGFfGs~at~~~CSkCy~~~~~ 31 (153)
.| .-||-||=+-.|+-+|--||...+.
T Consensus 13 kCeTPnCpF~mSVnTQP~CHEC~errq~ 40 (49)
T 2eqg_A 13 KCETPNCPFFMSVNTQPLCHECSERRQK 40 (49)
T ss_dssp BCSSTTCCSBCCTTTTTSCHHHHHHHHT
T ss_pred eecCCCCCeEEEecCccchHHHHHHHhh
Confidence 45 5689999999999999999986544
No 32
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.23 E-value=2.7 Score=28.36 Aligned_cols=25 Identities=32% Similarity=0.701 Sum_probs=20.5
Q ss_pred cccccccccccc-cc--cceeee-cCcee
Q 038787 89 LEKRCEICDKKV-GS--IELKCR-CGHLY 113 (153)
Q Consensus 89 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 113 (153)
.+..|..|++.| || +|++|+ |+.++
T Consensus 27 ~pt~C~~C~~~lwGl~kqg~~C~~C~~~~ 55 (83)
T 2yuu_A 27 QPTFCSVCKDFVWGLNKQGYKCRQCNAAI 55 (83)
T ss_dssp SCCCCSSSCCCCCSSSCCEEEETTTCCEE
T ss_pred CCcChhhcChhhccccccccccCCcCCee
Confidence 478999999988 44 799999 87764
No 33
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=66.96 E-value=2.1 Score=26.86 Aligned_cols=22 Identities=27% Similarity=0.847 Sum_probs=18.2
Q ss_pred cccccccccccccceeee-cCcee
Q 038787 91 KRCEICDKKVGSIELKCR-CGHLY 113 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~Cr-Cg~~F 113 (153)
..|..|+|.| ..|++|+ |++.+
T Consensus 15 t~C~~C~k~i-~~G~kC~~Ck~~c 37 (49)
T 1kbe_A 15 QVCNVCQKSM-IFGVKCKHCRLKC 37 (49)
T ss_dssp CCCSSSCCSS-CCEEEETTTTEEE
T ss_pred cCccccCcee-ECcCCCCCCCCcc
Confidence 5799999998 4899999 87654
No 34
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=64.16 E-value=3.3 Score=27.56 Aligned_cols=26 Identities=23% Similarity=0.621 Sum_probs=21.4
Q ss_pred ccccccccccccccccceeee-cCcee
Q 038787 88 ALEKRCEICDKKVGSIELKCR-CGHLY 113 (153)
Q Consensus 88 ~~~~rC~~C~kkvgl~gf~Cr-Cg~~F 113 (153)
..+..|..|+..|.-+|++|+ ||.+.
T Consensus 33 ~~pt~C~~C~~~l~~qG~kC~~C~~~c 59 (72)
T 2fnf_X 33 GGPGWCDLCGREVLRQALRCANCKFTC 59 (72)
T ss_dssp SSCCBCTTTSSBCSSCCEECTTSSCEE
T ss_pred CCCcchhhhhHHHHhCcCccCCCCCee
Confidence 357899999999966899999 87653
No 35
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=63.45 E-value=3.7 Score=26.28 Aligned_cols=24 Identities=33% Similarity=0.728 Sum_probs=19.1
Q ss_pred cccccccccccc-cc--cceeee-cCce
Q 038787 89 LEKRCEICDKKV-GS--IELKCR-CGHL 112 (153)
Q Consensus 89 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~ 112 (153)
.+..|..|++-| || .|++|+ |+.+
T Consensus 19 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 46 (65)
T 3uej_A 19 SPTFCDHCGSLLWGLVKQGLKCEDCGMN 46 (65)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CCCcccccChhhhccCceeeECCCCCCe
Confidence 477999999987 44 799998 7654
No 36
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=63.14 E-value=2.3 Score=25.81 Aligned_cols=24 Identities=29% Similarity=0.728 Sum_probs=19.6
Q ss_pred cccccccccccccccceeee-cCcee
Q 038787 89 LEKRCEICDKKVGSIELKCR-CGHLY 113 (153)
Q Consensus 89 ~~~rC~~C~kkvgl~gf~Cr-Cg~~F 113 (153)
.+..|..|++.|- .|++|+ |+...
T Consensus 13 ~pt~C~~C~~~l~-qG~~C~~C~~~~ 37 (52)
T 1faq_A 13 KLAFCDICQKFLL-NGFRCQTCGYKF 37 (52)
T ss_dssp SCEECTTSSSEEC-SEEECTTTTCCB
T ss_pred CCcCCCCcccccc-cCCEeCCCCCeE
Confidence 4689999999876 899999 76654
No 37
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.41 E-value=7.6 Score=23.70 Aligned_cols=25 Identities=32% Similarity=0.728 Sum_probs=18.3
Q ss_pred ccccccccccccccceeeecCceecC
Q 038787 90 EKRCEICDKKVGSIELKCRCGHLYCG 115 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 115 (153)
...|..|...+.- ...-.||++||.
T Consensus 20 ~~~C~IC~~~~~~-p~~~~CgH~fC~ 44 (63)
T 2ysj_A 20 EVICPICLDILQK-PVTIDCGHNFCL 44 (63)
T ss_dssp CCBCTTTCSBCSS-CEECTTSSEECH
T ss_pred CCCCCcCCchhCC-eEEeCCCCcchH
Confidence 5689999866543 344489999996
No 38
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=61.92 E-value=2.9 Score=26.65 Aligned_cols=24 Identities=25% Similarity=0.672 Sum_probs=20.2
Q ss_pred cccccccccccccccceeee-cCce
Q 038787 89 LEKRCEICDKKVGSIELKCR-CGHL 112 (153)
Q Consensus 89 ~~~rC~~C~kkvgl~gf~Cr-Cg~~ 112 (153)
.+..|..|++.|.-+|++|+ |+.+
T Consensus 21 ~pt~C~~C~~~i~kqg~kC~~C~~~ 45 (59)
T 1rfh_A 21 GPGWCDLCGREVLRQALRCANCKFT 45 (59)
T ss_dssp CCEECTTTCSEECSCCEECTTTSCE
T ss_pred CCeEchhcchhhhhCccEeCCCCCe
Confidence 57899999999955899999 7655
No 39
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=61.71 E-value=4 Score=28.25 Aligned_cols=23 Identities=26% Similarity=0.839 Sum_probs=18.5
Q ss_pred ccccccccccc----cccceeee-cCce
Q 038787 90 EKRCEICDKKV----GSIELKCR-CGHL 112 (153)
Q Consensus 90 ~~rC~~C~kkv----gl~gf~Cr-Cg~~ 112 (153)
..+|..|+|.+ +|+||+|. |+.+
T Consensus 38 ~s~C~vC~k~c~s~~~L~g~rC~WCq~~ 65 (84)
T 1r79_A 38 SAKCTVCDKTCGSVLRLQDWRCLWCKAM 65 (84)
T ss_dssp TCBCSSSCCBCCCTTTCCCEEESSSCCE
T ss_pred CCEeCCCCCEeCCccCCCCCCCcccChh
Confidence 46999999985 46899999 7655
No 40
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=60.63 E-value=3.9 Score=36.24 Aligned_cols=39 Identities=15% Similarity=0.338 Sum_probs=28.6
Q ss_pred cccccccccccc-cc--cceeee-cCceecCCCCCCCCCCCccc
Q 038787 89 LEKRCEICDKKV-GS--IELKCR-CGHLYCGTHRYPKEHACTFD 128 (153)
Q Consensus 89 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fD 128 (153)
.+..|..|++.+ || .|++|+ ||..+|....-.= ..|...
T Consensus 528 ~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v-~~C~~~ 570 (587)
T 3ky9_A 528 ETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV-PPCGRH 570 (587)
T ss_dssp SCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS-CCC---
T ss_pred CCcccccccccccccccCCcCCCCCCCccchhhhhcC-CCCCCC
Confidence 478999999987 77 699999 9999987755432 367544
No 41
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=60.50 E-value=3.8 Score=29.90 Aligned_cols=26 Identities=19% Similarity=0.501 Sum_probs=17.8
Q ss_pred cccccceeee-cCceecCCCCCCCCCCCc
Q 038787 99 KVGSIELKCR-CGHLYCGTHRYPKEHACT 126 (153)
Q Consensus 99 kvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~ 126 (153)
+|-+..++|+ ||++| .-+......|+
T Consensus 62 ~L~v~p~~C~~CG~~F--~~~~~kPsrCP 88 (105)
T 2gmg_A 62 VLLIKPAQCRKCGFVF--KAEINIPSRCP 88 (105)
T ss_dssp EEEECCCBBTTTCCBC--CCCSSCCSSCS
T ss_pred EEEEECcChhhCcCee--cccCCCCCCCc
Confidence 4556789999 99999 33444555554
No 42
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.51 E-value=10 Score=23.64 Aligned_cols=26 Identities=31% Similarity=0.701 Sum_probs=18.8
Q ss_pred ccccccccccccccceeeecCceecCC
Q 038787 90 EKRCEICDKKVGSIELKCRCGHLYCGT 116 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~CrCg~~FC~~ 116 (153)
...|..|...+.- ...-.||++||..
T Consensus 20 ~~~C~IC~~~~~~-~~~~~CgH~fC~~ 45 (73)
T 2ysl_A 20 EVICPICLDILQK-PVTIDCGHNFCLK 45 (73)
T ss_dssp CCBCTTTCSBCSS-EEECTTCCEEEHH
T ss_pred CCEeccCCcccCC-eEEcCCCChhhHH
Confidence 5689999876553 3344899999963
No 43
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.35 E-value=8.9 Score=25.90 Aligned_cols=43 Identities=19% Similarity=0.388 Sum_probs=30.4
Q ss_pred cccccccccccc-cc--cceeee-cCceecCCCCCCCCCCCcccchh
Q 038787 89 LEKRCEICDKKV-GS--IELKCR-CGHLYCGTHRYPKEHACTFDFKK 131 (153)
Q Consensus 89 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~ 131 (153)
.+..|..|++.| || +|++|+ |+..+=......=...|..++.+
T Consensus 27 ~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~~~e 73 (85)
T 2eli_A 27 SPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLCGMDHTE 73 (85)
T ss_dssp SCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSCSCCCCCCCC
T ss_pred CCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcCCcCCcchhh
Confidence 468999999987 44 799999 88775444333334678877763
No 44
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=55.60 E-value=5.9 Score=25.47 Aligned_cols=24 Identities=25% Similarity=0.671 Sum_probs=19.3
Q ss_pred cccccccccccc-cc--cceeee-cCce
Q 038787 89 LEKRCEICDKKV-GS--IELKCR-CGHL 112 (153)
Q Consensus 89 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~ 112 (153)
.+..|..|++.| || +|++|+ |+.+
T Consensus 23 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 50 (66)
T 1y8f_A 23 TPTYCYECEGLLWGIARQGMRCTECGVK 50 (66)
T ss_dssp SCCCCTTTCCCCCSSCCEEEEETTTCCE
T ss_pred CCcChhhcChhhcccCcceeEcCCCCCe
Confidence 467999999988 44 799999 7665
No 45
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=53.24 E-value=5.1 Score=26.65 Aligned_cols=25 Identities=28% Similarity=0.687 Sum_probs=20.1
Q ss_pred cccccccccccc-cc--cceeee-cCcee
Q 038787 89 LEKRCEICDKKV-GS--IELKCR-CGHLY 113 (153)
Q Consensus 89 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 113 (153)
.+..|..|++-| || +|++|+ |+...
T Consensus 33 ~pt~C~~C~~~lwGl~kqG~~C~~C~~~~ 61 (77)
T 2enn_A 33 QPTFCSVCHEFVWGLNKQGYQCRQCNAAI 61 (77)
T ss_dssp SCEECSSSCCEECCTTCCEEECSSSCCEE
T ss_pred CCcCccccChhhccccccccCcCCCCCcC
Confidence 478999999987 44 799999 87654
No 46
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=52.57 E-value=5.8 Score=26.36 Aligned_cols=25 Identities=28% Similarity=0.670 Sum_probs=19.6
Q ss_pred cccccccccccccc---cceeee-cCcee
Q 038787 89 LEKRCEICDKKVGS---IELKCR-CGHLY 113 (153)
Q Consensus 89 ~~~rC~~C~kkvgl---~gf~Cr-Cg~~F 113 (153)
-.-+|..|+..+.| .+.+|+ ||+-.
T Consensus 20 v~Y~C~~Cg~~~~l~~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 20 MIYLCADCGARNTIQAKEVIRCRECGHRV 48 (63)
T ss_dssp CCCBCSSSCCBCCCCSSSCCCCSSSCCCC
T ss_pred eEEECCCCCCeeecCCCCceECCCCCcEE
Confidence 35899999999998 368997 76543
No 47
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=52.33 E-value=9.7 Score=24.91 Aligned_cols=29 Identities=28% Similarity=0.510 Sum_probs=19.2
Q ss_pred cccccccccccccceee--ecCceecCCCCC
Q 038787 91 KRCEICDKKVGSIELKC--RCGHLYCGTHRY 119 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~C--rCg~~FC~~HRy 119 (153)
-+|..|++.|....|.. +=|..||..|..
T Consensus 43 F~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~ 73 (82)
T 2co8_A 43 FRCHTCEATLWPGGYEQHPGDGHFYCLQHLP 73 (82)
T ss_dssp CBCSSSCCBCCTTSEECCTTTCCCEETTTCC
T ss_pred CEEcCCCCCcCCCceeEeCcCCEEEChHHHH
Confidence 46667777777666654 467777777654
No 48
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.07 E-value=4.6 Score=26.66 Aligned_cols=25 Identities=24% Similarity=0.724 Sum_probs=19.6
Q ss_pred cccccccccccc-cc--cceeee-cCcee
Q 038787 89 LEKRCEICDKKV-GS--IELKCR-CGHLY 113 (153)
Q Consensus 89 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 113 (153)
.+..|..|++.| || +|++|+ |+..+
T Consensus 27 ~pt~C~~C~~~lwGl~kqG~~C~~C~~~~ 55 (74)
T 2db6_A 27 KPKFCDVCARMIVLNNKFGLRCKNCKTNI 55 (74)
T ss_dssp SCEECSSSCCEECHHHHEEEEESSSCCEE
T ss_pred CCcCchhcChhhccccCCccccCCCCCcc
Confidence 468999999987 33 799999 76654
No 49
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=51.46 E-value=4.1 Score=26.52 Aligned_cols=13 Identities=38% Similarity=0.731 Sum_probs=11.2
Q ss_pred ccccccccccccc
Q 038787 90 EKRCEICDKKVGS 102 (153)
Q Consensus 90 ~~rC~~C~kkvgl 102 (153)
|.||++|+|-+|-
T Consensus 3 PVRCFTCGkvi~~ 15 (55)
T 1ef4_A 3 PVRCLSCGKPVSA 15 (55)
T ss_dssp SSSCSCTTSCCHH
T ss_pred CeecCCCCCChhH
Confidence 6799999998875
No 50
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=50.09 E-value=5.1 Score=27.27 Aligned_cols=13 Identities=46% Similarity=0.818 Sum_probs=11.5
Q ss_pred ccccccccccccc
Q 038787 90 EKRCEICDKKVGS 102 (153)
Q Consensus 90 ~~rC~~C~kkvgl 102 (153)
|.||++|+|-+|-
T Consensus 4 PVRCFTCGkvi~~ 16 (70)
T 1twf_J 4 PVRCFSCGKVVGD 16 (70)
T ss_dssp CSBCTTTCCBCTT
T ss_pred CeecCCCCCChHH
Confidence 6799999999876
No 51
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=49.24 E-value=4.9 Score=26.24 Aligned_cols=24 Identities=21% Similarity=0.685 Sum_probs=20.2
Q ss_pred ccccccccccccc-eeee-cCceecC
Q 038787 92 RCEICDKKVGSIE-LKCR-CGHLYCG 115 (153)
Q Consensus 92 rC~~C~kkvgl~g-f~Cr-Cg~~FC~ 115 (153)
.|..|.+.+.-.+ |.|. |+..||.
T Consensus 17 ~C~~C~~~~~~~~~y~C~~C~~~FC~ 42 (59)
T 1z60_A 17 FCYGCQGELKDQHVYVCAVCQNVFCV 42 (59)
T ss_dssp EETTTTEECTTSEEECCTTTTCCBCH
T ss_pred cccccCcccCCCccEECCccCcCccc
Confidence 5999999985554 9998 9999985
No 52
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=48.64 E-value=11 Score=23.05 Aligned_cols=27 Identities=19% Similarity=0.605 Sum_probs=18.8
Q ss_pred cccccccccccccc--------------cceeee-cCceecC
Q 038787 89 LEKRCEICDKKVGS--------------IELKCR-CGHLYCG 115 (153)
Q Consensus 89 ~~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC~ 115 (153)
.+-.|..|+|.... ..|.|. ||..|-.
T Consensus 16 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~ 57 (74)
T 2lce_A 16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNR 57 (74)
T ss_dssp CSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESC
T ss_pred CCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCC
Confidence 46789999887542 347887 7777654
No 53
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=47.60 E-value=7.9 Score=24.90 Aligned_cols=30 Identities=23% Similarity=0.577 Sum_probs=23.9
Q ss_pred ccccccccccccccc----ceeee---cCceecCCCC
Q 038787 89 LEKRCEICDKKVGSI----ELKCR---CGHLYCGTHR 118 (153)
Q Consensus 89 ~~~rC~~C~kkvgl~----gf~Cr---Cg~~FC~~HR 118 (153)
+..+|..|+..|.+. -..|+ |+..||..=.
T Consensus 5 ~~k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~ 41 (60)
T 1wd2_A 5 NTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCL 41 (60)
T ss_dssp CCCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSC
T ss_pred cceECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcC
Confidence 356899999888883 47898 9999998654
No 54
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.22 E-value=16 Score=22.87 Aligned_cols=47 Identities=17% Similarity=0.366 Sum_probs=31.0
Q ss_pred ccccccccccccccceeeecCceecCCC---CCCCCCCCcccchhhhHHHH
Q 038787 90 EKRCEICDKKVGSIELKCRCGHLYCGTH---RYPKEHACTFDFKKFDRETL 137 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~CrCg~~FC~~H---Ry~e~H~C~fDyk~~~r~~l 137 (153)
...|..|...+.. ...-.||++||..= .+.....|.+--+...++.|
T Consensus 15 ~~~C~IC~~~~~~-~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 64 (71)
T 2d8t_A 15 VPECAICLQTCVH-PVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFL 64 (71)
T ss_dssp CCBCSSSSSBCSS-EEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHHHH
T ss_pred CCCCccCCcccCC-CEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHhhc
Confidence 5689999866543 34457999998632 23344678877776666666
No 55
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=43.69 E-value=13 Score=23.70 Aligned_cols=29 Identities=10% Similarity=0.285 Sum_probs=23.0
Q ss_pred cccccccccccccceeeecCceecCCCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTHRY 119 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~HRy 119 (153)
-+|..|++.|....|.=+=|..||..|-.
T Consensus 36 F~C~~C~~~L~~~~f~~~~g~~yC~~cy~ 64 (76)
T 1x68_A 36 FNCGKCSVSLVGKGFLTQNKEIFCQKCGS 64 (76)
T ss_dssp CBCTTTCCBCSSSCEEEETTEEEETTTTC
T ss_pred CChhhCCCcCCCCceEeECCEEECHHHhh
Confidence 57888898887777877888899987753
No 56
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=43.53 E-value=6.7 Score=24.28 Aligned_cols=27 Identities=19% Similarity=0.250 Sum_probs=18.2
Q ss_pred cccccccccccccceeeecCceecCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTH 117 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 117 (153)
-+|..|++.|+...|.=+=|..||..|
T Consensus 40 F~C~~C~~~L~~~~~~~~~g~~yC~~~ 66 (72)
T 3f6q_B 40 FVCAQCFQQFPEGLFYEFEGRKYCEHD 66 (72)
T ss_dssp SSCTTTCCCCGGGCCEEETTEEECHHH
T ss_pred CcccCCCCCCCCCCeEeECCeEeCHHH
Confidence 467778887766666666677777654
No 57
>4ayb_N DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_N 2y0s_N 2waq_N 4b1o_N 4b1p_O 2pmz_N 3hkz_N
Probab=41.77 E-value=7.3 Score=26.23 Aligned_cols=13 Identities=23% Similarity=0.585 Sum_probs=10.9
Q ss_pred ccccccccccccc
Q 038787 90 EKRCEICDKKVGS 102 (153)
Q Consensus 90 ~~rC~~C~kkvgl 102 (153)
|-||++|+|-+|-
T Consensus 4 PVRCFTCGkvi~~ 16 (66)
T 4ayb_N 4 PIRCFTCGSLIAD 16 (66)
T ss_dssp CSBCTTTCCBCHH
T ss_pred CcccCCCcHhHHH
Confidence 5799999998764
No 58
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=41.43 E-value=10 Score=23.66 Aligned_cols=27 Identities=22% Similarity=0.535 Sum_probs=19.0
Q ss_pred cccccccccccccc--------------cceeee-cCceecC
Q 038787 89 LEKRCEICDKKVGS--------------IELKCR-CGHLYCG 115 (153)
Q Consensus 89 ~~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC~ 115 (153)
+|-.|..|+|.... ..|.|. ||..|-.
T Consensus 3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~ 44 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRD 44 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESS
T ss_pred CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCC
Confidence 45678888876543 368888 8888854
No 59
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=40.73 E-value=15 Score=26.40 Aligned_cols=27 Identities=26% Similarity=0.748 Sum_probs=21.5
Q ss_pred cccccccccccccceeee-cCceecCCCCCC
Q 038787 91 KRCEICDKKVGSIELKCR-CGHLYCGTHRYP 120 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~ 120 (153)
-+|..|+|... |.|. |...||..|...
T Consensus 59 c~C~~C~k~~~---~~C~~Cp~sfC~~c~~g 86 (107)
T 4gne_A 59 HQCDECSSAAV---SFCEFCPHSFCKDHEKG 86 (107)
T ss_dssp GBCTTTCSBCC---EECSSSSCEECTTTCTT
T ss_pred CCCCcCCCCCC---cCcCCCCcchhhhccCC
Confidence 36778887754 8999 999999999753
No 60
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.96 E-value=28 Score=21.82 Aligned_cols=26 Identities=35% Similarity=0.823 Sum_probs=18.6
Q ss_pred ccccccccccccccceeeecCceecCC
Q 038787 90 EKRCEICDKKVGSIELKCRCGHLYCGT 116 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~CrCg~~FC~~ 116 (153)
...|..|...+.- ...-.||++||..
T Consensus 19 ~~~C~IC~~~~~~-p~~~~CgH~fC~~ 44 (85)
T 2ecv_A 19 EVTCPICLELLTQ-PLSLDCGHSFCQA 44 (85)
T ss_dssp CCCCTTTCSCCSS-CBCCSSSCCBCTT
T ss_pred CCCCCCCCcccCC-ceeCCCCCHHHHH
Confidence 4689999876543 3344799999964
No 61
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=39.79 E-value=26 Score=22.14 Aligned_cols=27 Identities=30% Similarity=0.614 Sum_probs=19.4
Q ss_pred cccccccccccccccceeee-cCceecCC
Q 038787 89 LEKRCEICDKKVGSIELKCR-CGHLYCGT 116 (153)
Q Consensus 89 ~~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~ 116 (153)
....|..|...+. ....-. ||++||..
T Consensus 14 ~~~~C~IC~~~~~-~p~~~~~CgH~fC~~ 41 (74)
T 2yur_A 14 DELLCLICKDIMT-DAVVIPCCGNSYCDE 41 (74)
T ss_dssp GGGSCSSSCCCCT-TCEECSSSCCEECTT
T ss_pred CCCCCcCCChHHh-CCeEcCCCCCHHHHH
Confidence 3568999976543 355667 99999974
No 62
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=39.27 E-value=7.5 Score=24.77 Aligned_cols=24 Identities=29% Similarity=0.447 Sum_probs=20.6
Q ss_pred cccccccccccccccceeee-cCce
Q 038787 89 LEKRCEICDKKVGSIELKCR-CGHL 112 (153)
Q Consensus 89 ~~~rC~~C~kkvgl~gf~Cr-Cg~~ 112 (153)
.+..|..|+.+++.---.|| ||++
T Consensus 13 ~k~iCpkC~a~~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 13 KKYVCLRCGATNPWGAKKCRKCGYK 37 (51)
T ss_dssp SEEECTTTCCEECTTCSSCSSSSSC
T ss_pred CCccCCCCCCcCCCCceecCCCCCc
Confidence 46789999999888888999 9887
No 63
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.58 E-value=13 Score=19.16 Aligned_cols=12 Identities=25% Similarity=0.476 Sum_probs=6.6
Q ss_pred cceeee-cCceec
Q 038787 103 IELKCR-CGHLYC 114 (153)
Q Consensus 103 ~gf~Cr-Cg~~FC 114 (153)
..|.|. ||..|-
T Consensus 8 k~~~C~~C~k~f~ 20 (36)
T 2elq_A 8 KPFKCSLCEYATR 20 (36)
T ss_dssp CSEECSSSSCEES
T ss_pred CCccCCCCCchhC
Confidence 346665 665554
No 64
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=38.29 E-value=13 Score=26.28 Aligned_cols=21 Identities=38% Similarity=0.727 Sum_probs=18.0
Q ss_pred cceeeecCceecCCCCCCCCC
Q 038787 103 IELKCRCGHLYCGTHRYPKEH 123 (153)
Q Consensus 103 ~gf~CrCg~~FC~~HRy~e~H 123 (153)
.=|+|.|++..=+.+|||..|
T Consensus 47 RFFkC~C~~Rt~sl~r~P~~~ 67 (92)
T 2kwq_A 47 RFFKCPCGNRTISLDRLPKKH 67 (92)
T ss_dssp EEEECTTSCEEEESSSSCCSC
T ss_pred EEEECCCCCceeEeeeCCCCC
Confidence 369999999999999999854
No 65
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.15 E-value=27 Score=22.20 Aligned_cols=26 Identities=27% Similarity=0.577 Sum_probs=18.8
Q ss_pred ccccccccccccc---cceeeecCceecC
Q 038787 90 EKRCEICDKKVGS---IELKCRCGHLYCG 115 (153)
Q Consensus 90 ~~rC~~C~kkvgl---~gf~CrCg~~FC~ 115 (153)
...|..|...+.. ....-.||++||.
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~CgH~fC~ 43 (88)
T 2ct2_A 15 VLECPICMESFTEEQLRPKLLHCGHTICR 43 (88)
T ss_dssp CCBCTTTCCBCCTTSSCEEECSSSCEEEH
T ss_pred CCCCccCCccccccCCCeEECCCCChhhH
Confidence 4679999877654 1344579999996
No 66
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.99 E-value=9.1 Score=23.91 Aligned_cols=27 Identities=22% Similarity=0.608 Sum_probs=19.0
Q ss_pred cccccccccccccceeeecCceecCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTH 117 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 117 (153)
-+|..|++.|....|.=+=|..||..|
T Consensus 32 F~C~~C~~~L~~~~f~~~~g~~yC~~c 58 (70)
T 2d8x_A 32 FRCDLCQEVLADIGFVKNAGRHLCRPC 58 (70)
T ss_dssp SBCSSSCCBCSSSCCEEETTEEECHHH
T ss_pred CEeCCCCCcCCCCccEeECCeEECHHH
Confidence 477788888777666666677777654
No 67
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=36.27 E-value=38 Score=20.55 Aligned_cols=26 Identities=27% Similarity=0.754 Sum_probs=17.1
Q ss_pred cccccccccccccc--------------cceeee-cCceec
Q 038787 89 LEKRCEICDKKVGS--------------IELKCR-CGHLYC 114 (153)
Q Consensus 89 ~~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC 114 (153)
.+-.|..|++.... ..|.|. ||..|-
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 57 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFI 57 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEES
T ss_pred CCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccC
Confidence 46788888876542 247776 666664
No 68
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.71 E-value=29 Score=20.28 Aligned_cols=25 Identities=28% Similarity=0.805 Sum_probs=18.1
Q ss_pred ccccccccccccccceeeecCceecC
Q 038787 90 EKRCEICDKKVGSIELKCRCGHLYCG 115 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 115 (153)
...|..|...+.. ...-.||++||.
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~ 39 (58)
T 2ecj_A 15 EASCSVCLEYLKE-PVIIECGHNFCK 39 (58)
T ss_dssp CCBCSSSCCBCSS-CCCCSSCCCCCH
T ss_pred CCCCccCCcccCc-cEeCCCCCccCH
Confidence 4689999876544 344579999985
No 69
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=35.33 E-value=13 Score=22.43 Aligned_cols=26 Identities=15% Similarity=0.476 Sum_probs=16.7
Q ss_pred cccccccccccc-----------cccceeee-cCceec
Q 038787 89 LEKRCEICDKKV-----------GSIELKCR-CGHLYC 114 (153)
Q Consensus 89 ~~~rC~~C~kkv-----------gl~gf~Cr-Cg~~FC 114 (153)
.+-.|..|+|.. |-..|.|. ||..|-
T Consensus 13 k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~ 50 (62)
T 1vd4_A 13 ASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVE 50 (62)
T ss_dssp SEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCE
T ss_pred CCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccc
Confidence 356788888742 22458887 777763
No 70
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.08 E-value=19 Score=24.71 Aligned_cols=31 Identities=32% Similarity=0.851 Sum_probs=25.9
Q ss_pred cccccccccccccc---cceeee-cCceecCCCCC
Q 038787 89 LEKRCEICDKKVGS---IELKCR-CGHLYCGTHRY 119 (153)
Q Consensus 89 ~~~rC~~C~kkvgl---~gf~Cr-Cg~~FC~~HRy 119 (153)
...+|..|...+|+ +|..|+ |-+-.|..-|-
T Consensus 24 ~~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv 58 (76)
T 2csz_A 24 SDRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRI 58 (76)
T ss_dssp CCCBCSSSCCBCSSSCTTTSEETTTTEECCTTSEE
T ss_pred CccchhhhCccccccccCCCcCcccChhhcccccc
Confidence 46799999999999 589999 98888877664
No 71
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=33.77 E-value=12 Score=23.11 Aligned_cols=27 Identities=33% Similarity=0.502 Sum_probs=18.3
Q ss_pred cccccccccccccceeeecCceecCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTH 117 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 117 (153)
-+|..|++.|....|.=+=|..||..|
T Consensus 32 F~C~~C~~~L~~~~~~~~~g~~yC~~~ 58 (66)
T 1nyp_A 32 FVCAKCEKPFLGHRHYERKGLAYCETH 58 (66)
T ss_dssp CBCTTTCCBCSSSCCEEETTEEECHHH
T ss_pred CEECCCCCCCCCCceEeECCcEECHHH
Confidence 467788887776666666666776554
No 72
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=33.56 E-value=11 Score=24.78 Aligned_cols=25 Identities=28% Similarity=0.521 Sum_probs=11.5
Q ss_pred ccccccccccccceeeecCceecCC
Q 038787 92 RCEICDKKVGSIELKCRCGHLYCGT 116 (153)
Q Consensus 92 rC~~C~kkvgl~gf~CrCg~~FC~~ 116 (153)
+|..|++.|....|.=+=|..||..
T Consensus 53 ~C~~C~~~L~~~~~~~~~g~~yC~~ 77 (89)
T 1x64_A 53 VCADCNLNLKQKGYFFVEGELYCET 77 (89)
T ss_dssp CCSSSCCCTTTSCCEEETTEEECHH
T ss_pred EecCCCCCCCCCCeEeECCEEECHH
Confidence 4445555554434444444444433
No 73
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.20 E-value=13 Score=23.29 Aligned_cols=27 Identities=15% Similarity=0.343 Sum_probs=16.0
Q ss_pred cccccccccccccceeeecCceecCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTH 117 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 117 (153)
-+|..|++.|....|.=+=|..||..|
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~c 60 (72)
T 1x61_A 34 FVCSTCRAQLRGQHFYAVERRAYCEGC 60 (72)
T ss_dssp CBCSSSCCBCTTSCEEESSSCEEEHHH
T ss_pred CcccccCCcCCcCcCEeeCCeEECHHH
Confidence 466677777755555555555665443
No 74
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.00 E-value=24 Score=22.59 Aligned_cols=29 Identities=21% Similarity=0.544 Sum_probs=22.9
Q ss_pred cccccccccccccceeeecCceecCCCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTHRY 119 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~HRy 119 (153)
-+|..|++.|....|.=+=|..||..|-.
T Consensus 44 F~C~~C~~~L~~~~f~~~~~~~~C~~c~~ 72 (82)
T 2ehe_A 44 FRCCRCQRSLADEPFTCQDSELLCNDCYC 72 (82)
T ss_dssp SBCTTTCCBCSSCCEEEETTEEEETTTSS
T ss_pred CeecCCCCccCCCccEeeCCEEECHHHHh
Confidence 57888999888777877778889977653
No 75
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.93 E-value=12 Score=23.38 Aligned_cols=27 Identities=11% Similarity=0.283 Sum_probs=19.2
Q ss_pred cccccccccccccceeeecCceecCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTH 117 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 117 (153)
-+|..|++.|.-..|.=+=|..||..|
T Consensus 36 F~C~~C~~~L~~~~f~~~~g~~yC~~c 62 (72)
T 1x4l_A 36 FNCKKCSLSLVGRGFLTERDDILCPDC 62 (72)
T ss_dssp CBCSSSCCBCTTSCCEECSSSEECHHH
T ss_pred CEeccCCCcCCCCccEeECCEEEChhH
Confidence 477788888776667667777777554
No 76
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=32.91 E-value=21 Score=20.19 Aligned_cols=25 Identities=28% Similarity=0.603 Sum_probs=14.1
Q ss_pred ccccccccccccc--------------cceeee-cCceec
Q 038787 90 EKRCEICDKKVGS--------------IELKCR-CGHLYC 114 (153)
Q Consensus 90 ~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC 114 (153)
+-.|..|++.... ..|.|. ||..|-
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 43 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAA 43 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEES
T ss_pred CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhC
Confidence 4567777765432 347776 666653
No 77
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.38 E-value=13 Score=23.55 Aligned_cols=27 Identities=19% Similarity=0.250 Sum_probs=15.8
Q ss_pred cccccccccccccceeeecCceecCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTH 117 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 117 (153)
-+|..|++.|....|.=+=|..||..|
T Consensus 40 F~C~~C~~~L~~~~~~~~~g~~yC~~~ 66 (77)
T 1g47_A 40 FVCAQCFQQFPEGLFYEFEGRKYCEHD 66 (77)
T ss_dssp CCCTTTCCCCGGGCSEEETTEEECHHH
T ss_pred CeECCCCCCCCCCCeEeECCeEeCHHH
Confidence 356666666666555555556665443
No 78
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=32.28 E-value=14 Score=17.57 Aligned_cols=11 Identities=27% Similarity=1.029 Sum_probs=6.7
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 3 ~~~C~~C~~~f~ 14 (30)
T 2m0d_A 3 PYQCDYCGRSFS 14 (30)
T ss_dssp CEECTTTCCEES
T ss_pred CccCCCCCcccC
Confidence 35666 666664
No 79
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.13 E-value=34 Score=21.76 Aligned_cols=25 Identities=28% Similarity=0.785 Sum_probs=18.2
Q ss_pred ccccccccccccccceeeecCceecC
Q 038787 90 EKRCEICDKKVGSIELKCRCGHLYCG 115 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 115 (153)
...|..|...+.- ...-.||++||.
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~ 39 (81)
T 2csy_A 15 PFRCFICRQAFQN-PVVTKCRHYFCE 39 (81)
T ss_dssp CSBCSSSCSBCCS-EEECTTSCEEEH
T ss_pred CCCCcCCCchhcC-eeEccCCCHhHH
Confidence 5689999776533 445579999985
No 80
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=32.03 E-value=18 Score=25.23 Aligned_cols=30 Identities=23% Similarity=0.753 Sum_probs=22.1
Q ss_pred cccccccccccccccc----cc-eeee-cCceecCCC
Q 038787 87 SALEKRCEICDKKVGS----IE-LKCR-CGHLYCGTH 117 (153)
Q Consensus 87 ~~~~~rC~~C~kkvgl----~g-f~Cr-Cg~~FC~~H 117 (153)
+..+-.|..|+|. .+ .| .+|+ ||.+|=+-=
T Consensus 32 q~~ky~CpfCGk~-~vkR~a~GIW~C~kCg~~~AGGA 67 (83)
T 3j21_i 32 MRQKHTCPVCGRK-AVKRISTGIWQCQKCGATFAGGA 67 (83)
T ss_dssp HHSCBCCSSSCSS-CEEEEETTEEEETTTCCEEECCS
T ss_pred hhcccCCCCCCCc-eeEecCcCeEEcCCCCCEEeCCc
Confidence 3457899999876 34 34 6999 999997653
No 81
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=32.01 E-value=18 Score=25.64 Aligned_cols=30 Identities=27% Similarity=0.651 Sum_probs=22.2
Q ss_pred cccccccccccccccc----cc-eeee-cCceecCCC
Q 038787 87 SALEKRCEICDKKVGS----IE-LKCR-CGHLYCGTH 117 (153)
Q Consensus 87 ~~~~~rC~~C~kkvgl----~g-f~Cr-Cg~~FC~~H 117 (153)
+..+-.|..|+|. .+ .| .+|+ ||.+|=+-=
T Consensus 33 q~~ky~CpfCgk~-~vkR~a~GIW~C~~Cg~~~AGGA 68 (92)
T 3iz5_m 33 QHSKYFCEFCGKF-AVKRKAVGIWGCKDCGKVKAGGA 68 (92)
T ss_dssp HHSCBCCTTTCSS-CBEEEETTEEECSSSCCEEECCS
T ss_pred HhccccCcccCCC-eeEecCcceEEcCCCCCEEeCCc
Confidence 3456799999876 44 35 5999 999997753
No 82
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=31.91 E-value=23 Score=20.33 Aligned_cols=11 Identities=18% Similarity=0.766 Sum_probs=6.3
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 30 ~~~C~~C~~~f~ 41 (60)
T 2adr_A 30 PYPCGLCNRAFT 41 (60)
T ss_dssp SEECTTTCCEES
T ss_pred CccCCCCCCccC
Confidence 46666 665553
No 83
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=31.69 E-value=24 Score=19.93 Aligned_cols=11 Identities=18% Similarity=0.709 Sum_probs=6.6
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 29 ~~~C~~C~~~f~ 40 (57)
T 1bbo_A 29 PYHCTYCNFSFK 40 (57)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCCCchhc
Confidence 46676 666553
No 84
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=31.66 E-value=16 Score=17.47 Aligned_cols=12 Identities=25% Similarity=0.783 Sum_probs=7.4
Q ss_pred ceeee-cCceecC
Q 038787 104 ELKCR-CGHLYCG 115 (153)
Q Consensus 104 gf~Cr-Cg~~FC~ 115 (153)
.|.|. ||..|-.
T Consensus 3 ~~~C~~C~k~f~~ 15 (28)
T 2kvf_A 3 PYSCSVCGKRFSL 15 (28)
T ss_dssp SEECSSSCCEESC
T ss_pred CccCCCCCcccCC
Confidence 36666 7776654
No 85
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=31.46 E-value=41 Score=20.96 Aligned_cols=26 Identities=27% Similarity=0.741 Sum_probs=18.3
Q ss_pred ccccccccccccccceeeecCceecCC
Q 038787 90 EKRCEICDKKVGSIELKCRCGHLYCGT 116 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~CrCg~~FC~~ 116 (153)
...|..|...+.- ...-.||++||..
T Consensus 19 ~~~C~IC~~~~~~-p~~~~CgH~fC~~ 44 (85)
T 2ecw_A 19 EVTCPICLELLKE-PVSADCNHSFCRA 44 (85)
T ss_dssp TTSCTTTCSCCSS-CEECTTSCCBCHH
T ss_pred CCCCcCCChhhCc-ceeCCCCCHHHHH
Confidence 4689999766433 3455799999953
No 86
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=31.39 E-value=16 Score=17.47 Aligned_cols=11 Identities=18% Similarity=0.537 Sum_probs=6.4
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 3 ~~~C~~C~k~f~ 14 (27)
T 2kvh_A 3 PFSCSLCPQRSR 14 (27)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCcChhhC
Confidence 35665 666664
No 87
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=31.36 E-value=13 Score=17.55 Aligned_cols=11 Identities=27% Similarity=0.824 Sum_probs=5.7
Q ss_pred eeee-cCceecC
Q 038787 105 LKCR-CGHLYCG 115 (153)
Q Consensus 105 f~Cr-Cg~~FC~ 115 (153)
|.|. ||..|-.
T Consensus 2 ~~C~~C~k~f~~ 13 (27)
T 1znf_A 2 YKCGLCERSFVE 13 (27)
T ss_dssp CBCSSSCCBCSS
T ss_pred ccCCCCCCcCCC
Confidence 4555 5555543
No 88
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=31.14 E-value=15 Score=24.35 Aligned_cols=26 Identities=23% Similarity=0.646 Sum_probs=18.8
Q ss_pred ccccccccccccc---cceeeecCceecC
Q 038787 90 EKRCEICDKKVGS---IELKCRCGHLYCG 115 (153)
Q Consensus 90 ~~rC~~C~kkvgl---~gf~CrCg~~FC~ 115 (153)
...|..|--.+.+ .-+-|.||+.||.
T Consensus 11 ~~~CpICle~~~~~d~~~~p~~CGH~fC~ 39 (78)
T 1e4u_A 11 PVECPLCMEPLEIDDINFFPCTCGYQICR 39 (78)
T ss_dssp CCBCTTTCCBCCTTTTTCCSSTTSCCCCH
T ss_pred CCcCCccCccCccccccccccCCCCCcCH
Confidence 3578888887654 2345889999995
No 89
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=30.88 E-value=19 Score=18.09 Aligned_cols=11 Identities=18% Similarity=0.579 Sum_probs=5.9
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 7 ~~~C~~C~k~f~ 18 (35)
T 2elx_A 7 GYVCALCLKKFV 18 (35)
T ss_dssp SEECSSSCCEES
T ss_pred CeECCCCcchhC
Confidence 45565 555553
No 90
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=30.81 E-value=26 Score=24.30 Aligned_cols=31 Identities=26% Similarity=0.614 Sum_probs=21.2
Q ss_pred ccccccccccccccceeee---cCceecCCCCCCCCC
Q 038787 90 EKRCEICDKKVGSIELKCR---CGHLYCGTHRYPKEH 123 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~Cr---Cg~~FC~~HRy~e~H 123 (153)
..+|..|.+. +-.-+.|- ||+++|++ |+..|
T Consensus 25 ~~~C~~C~~~-~~~lw~CL~~~Cg~vgCgr--~~~~H 58 (97)
T 2uzg_A 25 LGTCQDCKVQ-GPNLWACLENRCSYVGCGE--SQVDH 58 (97)
T ss_dssp TTCCSSSCCC-CSSCEEECCTTCCCEECCT--TTTCH
T ss_pred CCcCcCcCCC-CCCceeeecccCCCcccCC--CcChH
Confidence 4689999843 22226777 99999997 44433
No 91
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=30.75 E-value=15 Score=17.38 Aligned_cols=10 Identities=60% Similarity=1.501 Sum_probs=6.2
Q ss_pred eeee-cCceec
Q 038787 105 LKCR-CGHLYC 114 (153)
Q Consensus 105 f~Cr-Cg~~FC 114 (153)
|.|. ||..|-
T Consensus 3 ~~C~~C~k~f~ 13 (29)
T 2m0f_A 3 LKCRECGKQFT 13 (29)
T ss_dssp EECTTTSCEES
T ss_pred ccCCCCCCccC
Confidence 5666 666664
No 92
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=30.56 E-value=22 Score=26.96 Aligned_cols=30 Identities=20% Similarity=0.480 Sum_probs=25.7
Q ss_pred cccccccccccccc---cceeee-cCceecCCCC
Q 038787 89 LEKRCEICDKKVGS---IELKCR-CGHLYCGTHR 118 (153)
Q Consensus 89 ~~~rC~~C~kkvgl---~gf~Cr-Cg~~FC~~HR 118 (153)
....|..|.+.+|+ .|..|. |.+.+|..=+
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~ 100 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCS 100 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGE
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccc
Confidence 46899999999999 478999 9999998655
No 93
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=30.38 E-value=20 Score=18.19 Aligned_cols=11 Identities=27% Similarity=0.797 Sum_probs=6.0
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 7 ~~~C~~C~k~f~ 18 (35)
T 1srk_A 7 PFVCRICLSAFT 18 (35)
T ss_dssp CEECSSSCCEES
T ss_pred CeeCCCCCcccC
Confidence 45565 555553
No 94
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=30.14 E-value=16 Score=17.69 Aligned_cols=11 Identities=18% Similarity=0.440 Sum_probs=6.5
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 3 ~~~C~~C~k~f~ 14 (27)
T 2kvg_A 3 PYRCPLCRAGCP 14 (27)
T ss_dssp TEEETTTTEEES
T ss_pred CcCCCCCCcccC
Confidence 35666 666663
No 95
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=30.13 E-value=17 Score=24.69 Aligned_cols=29 Identities=24% Similarity=0.558 Sum_probs=20.7
Q ss_pred cccccccccccccccc----cc-eeee-cCceecCC
Q 038787 87 SALEKRCEICDKKVGS----IE-LKCR-CGHLYCGT 116 (153)
Q Consensus 87 ~~~~~rC~~C~kkvgl----~g-f~Cr-Cg~~FC~~ 116 (153)
+..+-.|..|+|. .+ +| .+|+ ||.+|=+-
T Consensus 23 q~~ky~C~fCgk~-~vkR~a~GIW~C~~C~~~~AGG 57 (72)
T 3jyw_9 23 QHARYDCSFCGKK-TVKRGAAGIWTCSCCKKTVAGG 57 (72)
T ss_dssp HHSCBCCSSCCSS-CBSBCSSSCBCCSSSCCCCCCS
T ss_pred hccCccCCCCCCc-eeEecCCCeEECCCCCCEEeCC
Confidence 3457789999865 34 34 5899 99988664
No 96
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.04 E-value=15 Score=22.83 Aligned_cols=27 Identities=15% Similarity=0.413 Sum_probs=17.6
Q ss_pred cccccccccccccceeeecCceecCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTH 117 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 117 (153)
-+|..|++.|....|.=+=|..||..|
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~c 60 (72)
T 1x4k_A 34 FICHRCQQPIGTKSFIPKDNQNFCVPC 60 (72)
T ss_dssp TCCSSSCCCCCSSSEEEETTEEEEHHH
T ss_pred CcccccCCccCCCccCccCCeEECHHH
Confidence 466777777766666666666666544
No 97
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=30.01 E-value=14 Score=25.56 Aligned_cols=13 Identities=23% Similarity=0.652 Sum_probs=10.3
Q ss_pred cceeeecCceecC
Q 038787 103 IELKCRCGHLYCG 115 (153)
Q Consensus 103 ~gf~CrCg~~FC~ 115 (153)
..+.||||..|--
T Consensus 22 y~ypCrCGd~F~i 34 (83)
T 1yop_A 22 FTYPCPCGDRFQI 34 (83)
T ss_dssp EEEEETTTEEEEE
T ss_pred EEEeCCCCCeEEE
Confidence 4688999998843
No 98
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.93 E-value=30 Score=20.83 Aligned_cols=26 Identities=31% Similarity=0.851 Sum_probs=18.0
Q ss_pred cccccccccccccc------ceeeecCceecC
Q 038787 90 EKRCEICDKKVGSI------ELKCRCGHLYCG 115 (153)
Q Consensus 90 ~~rC~~C~kkvgl~------gf~CrCg~~FC~ 115 (153)
...|..|...+... ...-.||++||.
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~ 46 (69)
T 2ea6_A 15 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCS 46 (69)
T ss_dssp CCCCTTTCCCHHHHTTTTCCEEECSSSCEEEH
T ss_pred CCCCcccCccccccccccCCeEeCCCCChhcH
Confidence 56899998765432 145579999985
No 99
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=29.39 E-value=14 Score=17.62 Aligned_cols=10 Identities=20% Similarity=0.919 Sum_probs=5.5
Q ss_pred eeee-cCceec
Q 038787 105 LKCR-CGHLYC 114 (153)
Q Consensus 105 f~Cr-Cg~~FC 114 (153)
|.|. ||..|-
T Consensus 3 ~~C~~C~~~f~ 13 (29)
T 1ard_A 3 FVCEVCTRAFA 13 (29)
T ss_dssp CBCTTTCCBCS
T ss_pred eECCCCCcccC
Confidence 5565 655553
No 100
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.29 E-value=18 Score=18.57 Aligned_cols=10 Identities=20% Similarity=0.840 Sum_probs=5.3
Q ss_pred ceeee-cCcee
Q 038787 104 ELKCR-CGHLY 113 (153)
Q Consensus 104 gf~Cr-Cg~~F 113 (153)
.|.|. ||..|
T Consensus 9 ~~~C~~C~k~f 19 (37)
T 2elo_A 9 SYSCPVCEKSF 19 (37)
T ss_dssp CCEETTTTEEC
T ss_pred CcCCCCCCCcc
Confidence 45555 55555
No 101
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=35.03 E-value=12 Score=17.78 Aligned_cols=13 Identities=23% Similarity=0.815 Sum_probs=8.0
Q ss_pred ceeee-cCceecCC
Q 038787 104 ELKCR-CGHLYCGT 116 (153)
Q Consensus 104 gf~Cr-Cg~~FC~~ 116 (153)
.|.|. ||..|-..
T Consensus 2 p~~C~~C~k~f~~~ 15 (26)
T 2lvu_A 2 PYVCERCGKRFVQS 15 (26)
Confidence 35666 77777553
No 102
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=28.83 E-value=23 Score=21.44 Aligned_cols=26 Identities=27% Similarity=0.622 Sum_probs=16.0
Q ss_pred cccccccccccccc--------------cceeee-cCceec
Q 038787 89 LEKRCEICDKKVGS--------------IELKCR-CGHLYC 114 (153)
Q Consensus 89 ~~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC 114 (153)
++-.|..|.+.... ..|.|. |+..|-
T Consensus 13 k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~ 53 (72)
T 1x6e_A 13 KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFS 53 (72)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEES
T ss_pred CCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccC
Confidence 45678888775432 347776 666553
No 103
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.62 E-value=17 Score=22.63 Aligned_cols=27 Identities=26% Similarity=0.470 Sum_probs=18.2
Q ss_pred cccccccccccccceeeecCceecCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTH 117 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 117 (153)
-+|..|++.|....|.=+=|..||..|
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~c 60 (72)
T 1wyh_A 34 FLCSGCEQPLGSRSFVPDKGAHYCVPC 60 (72)
T ss_dssp CBCTTTCCBTTTSCEEEETTEEEEHHH
T ss_pred CeECCCCCcCCCCccCCcCCeEECHHH
Confidence 467778888776666666666676544
No 104
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.54 E-value=10 Score=24.46 Aligned_cols=26 Identities=19% Similarity=0.434 Sum_probs=14.2
Q ss_pred ccccccccccccceeeecCceecCCC
Q 038787 92 RCEICDKKVGSIELKCRCGHLYCGTH 117 (153)
Q Consensus 92 rC~~C~kkvgl~gf~CrCg~~FC~~H 117 (153)
+|..|++.|....|.=+=|..||..|
T Consensus 43 ~C~~C~~~L~~~~~~~~~g~~yC~~c 68 (79)
T 1x62_A 43 VCTDCGTNLKQKGHFFVEDQIYCEKH 68 (79)
T ss_dssp SCSSSCCCHHHHCCEESSSCEECHHH
T ss_pred eeCCCCCCCCCCCeEeECCEEECHHH
Confidence 55566666654445555555555443
No 105
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.40 E-value=24 Score=22.24 Aligned_cols=25 Identities=24% Similarity=0.489 Sum_probs=17.8
Q ss_pred cccccccccccccceeeecCceecC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCG 115 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~ 115 (153)
-+|..|++.|....|.=+=|..||.
T Consensus 37 F~C~~C~~~L~~~~~~~~~g~~yC~ 61 (76)
T 2cu8_A 37 LKCERCSKTLTPGGHAEHDGKPFCH 61 (76)
T ss_dssp CBCSSSCCBCCTTSCEEETTEEECT
T ss_pred CCCCCCCCccCCCceEeECCEEecc
Confidence 4677888887766666666677776
No 106
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=28.40 E-value=17 Score=23.38 Aligned_cols=27 Identities=22% Similarity=0.550 Sum_probs=15.6
Q ss_pred cccccccccccccceeeecCceecCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTH 117 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 117 (153)
-+|..|++.|....|.=+=|..||..|
T Consensus 35 F~C~~C~~~L~~~~~~~~~~~~yC~~c 61 (81)
T 1a7i_A 35 FLCMVCRKNLDSTTVAIHDAEVYCKSC 61 (81)
T ss_dssp EECSSSCCEECSSCCEEETTEEECSHH
T ss_pred CccCCCCCCCCCCCeEeeCCEEECHHH
Confidence 356666666665555555555565443
No 107
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.31 E-value=41 Score=20.92 Aligned_cols=25 Identities=24% Similarity=0.543 Sum_probs=18.0
Q ss_pred ccccccccccccccceee-ecCceecC
Q 038787 90 EKRCEICDKKVGSIELKC-RCGHLYCG 115 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~C-rCg~~FC~ 115 (153)
...|..|...+.- ...- .||++||.
T Consensus 15 ~~~C~IC~~~~~~-p~~~~~CgH~fC~ 40 (72)
T 2djb_A 15 YILCSICKGYLID-ATTITECLHTFCK 40 (72)
T ss_dssp GGSCTTTSSCCSS-CEECSSSCCEECH
T ss_pred CCCCCCCChHHHC-cCEECCCCCHHHH
Confidence 5689999765443 4444 79999986
No 108
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=28.31 E-value=28 Score=25.71 Aligned_cols=30 Identities=23% Similarity=0.651 Sum_probs=24.8
Q ss_pred cccccccccccccc---cceeee-cCceecCCCC
Q 038787 89 LEKRCEICDKKVGS---IELKCR-CGHLYCGTHR 118 (153)
Q Consensus 89 ~~~rC~~C~kkvgl---~gf~Cr-Cg~~FC~~HR 118 (153)
....|..|.+..|+ .|..|. |.+.+|..=+
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~ 87 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG 87 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccC
Confidence 45789999999997 477999 9999998544
No 109
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=28.10 E-value=16 Score=25.64 Aligned_cols=12 Identities=25% Similarity=0.764 Sum_probs=9.9
Q ss_pred ccceeeecCcee
Q 038787 102 SIELKCRCGHLY 113 (153)
Q Consensus 102 l~gf~CrCg~~F 113 (153)
...+.||||..|
T Consensus 21 ~y~ypCrCGd~F 32 (89)
T 2jr7_A 21 TYFYPCPCGDNF 32 (89)
T ss_dssp EEEEECTTSSEE
T ss_pred EEEEcCCCCCEE
Confidence 346889999998
No 110
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=27.66 E-value=16 Score=25.21 Aligned_cols=41 Identities=24% Similarity=0.459 Sum_probs=25.6
Q ss_pred cccccccccccccc---c--ceeee-cCceecCCCCC---CCCCCCcccc
Q 038787 89 LEKRCEICDKKVGS---I--ELKCR-CGHLYCGTHRY---PKEHACTFDF 129 (153)
Q Consensus 89 ~~~rC~~C~kkvgl---~--gf~Cr-Cg~~FC~~HRy---~e~H~C~fDy 129 (153)
.+..|..|++.|=. . ||+|+ |+.+.=.++.. .=-..|..+|
T Consensus 34 ~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~k~~~v~~~C~~~~ 83 (84)
T 2row_A 34 FPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMDKKEEIIAPCKVYY 83 (84)
T ss_dssp SCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHHHTCTTCCCCSTTT
T ss_pred CCcchhhcCHhhhccccCCCCCEecCCCCccchhHhCCccccccccCcCC
Confidence 46789999987743 3 99999 76665333333 2234455444
No 111
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=27.65 E-value=24 Score=24.06 Aligned_cols=40 Identities=23% Similarity=0.514 Sum_probs=23.9
Q ss_pred ccccccccccccccceeeecCceecCC--CCCCC--CCCCcccch
Q 038787 90 EKRCEICDKKVGSIELKCRCGHLYCGT--HRYPK--EHACTFDFK 130 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~CrCg~~FC~~--HRy~e--~H~C~fDyk 130 (153)
.-.|..|...+.- ...-.||++||.. .++-+ ...|++--+
T Consensus 15 ~~~C~iC~~~~~~-p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~ 58 (115)
T 3l11_A 15 ECQCGICMEILVE-PVTLPCNHTLCKPCFQSTVEKASLCCPFCRR 58 (115)
T ss_dssp HHBCTTTCSBCSS-CEECTTSCEECHHHHCCCCCTTTSBCTTTCC
T ss_pred CCCCccCCcccCc-eeEcCCCCHHhHHHHHHHHhHCcCCCCCCCc
Confidence 5689999865443 3334799999963 23322 345665444
No 112
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=27.57 E-value=20 Score=18.43 Aligned_cols=8 Identities=38% Similarity=1.012 Sum_probs=3.4
Q ss_pred cccccccc
Q 038787 91 KRCEICDK 98 (153)
Q Consensus 91 ~rC~~C~k 98 (153)
-.|..|+|
T Consensus 12 ~~C~~C~k 19 (37)
T 1p7a_A 12 FQCPDCDR 19 (37)
T ss_dssp BCCTTTCC
T ss_pred ccCCCCCc
Confidence 34444443
No 113
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.37 E-value=26 Score=18.01 Aligned_cols=12 Identities=25% Similarity=0.866 Sum_probs=7.0
Q ss_pred ceeee-cCceecC
Q 038787 104 ELKCR-CGHLYCG 115 (153)
Q Consensus 104 gf~Cr-Cg~~FC~ 115 (153)
.|.|. ||..|-.
T Consensus 9 ~~~C~~C~k~f~~ 21 (37)
T 2elp_A 9 AMKCPYCDFYFMK 21 (37)
T ss_dssp CEECSSSSCEECS
T ss_pred CeECCCCChhhcc
Confidence 46666 6666643
No 114
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.33 E-value=26 Score=17.74 Aligned_cols=10 Identities=30% Similarity=0.663 Sum_probs=5.0
Q ss_pred ceeee-cCcee
Q 038787 104 ELKCR-CGHLY 113 (153)
Q Consensus 104 gf~Cr-Cg~~F 113 (153)
.|.|. ||..|
T Consensus 9 ~~~C~~C~k~f 19 (36)
T 2elt_A 9 PYKCPQCSYAS 19 (36)
T ss_dssp SEECSSSSCEE
T ss_pred CCCCCCCCccc
Confidence 45555 55544
No 115
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.11 E-value=18 Score=22.45 Aligned_cols=27 Identities=22% Similarity=0.486 Sum_probs=16.1
Q ss_pred cccccccccccccceeeecCceecCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTH 117 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 117 (153)
-+|..|++.|....|.=+=|..||..|
T Consensus 32 F~C~~C~~~L~~~~~~~~~~~~yC~~c 58 (70)
T 2d8z_A 32 FVCTACRKQLSGQRFTARDDFAYCLNC 58 (70)
T ss_dssp SBCSSSCCBCTTSCCEESSSSEECHHH
T ss_pred CccCCCCCcCCcCceEeeCCeEECHHH
Confidence 466777777765555555555565443
No 116
>1e0f_I Haemadin, factor IIA; coagulation//heparin-B, coagulation/crystal structure/heparin-binding site/ hirudin/thrombin inhibitor; 3.1A {Haemadipsa sylvestris} SCOP: g.3.15.2
Probab=27.05 E-value=35 Score=21.77 Aligned_cols=30 Identities=27% Similarity=0.558 Sum_probs=23.9
Q ss_pred cccceeeecCceecCCCCCCCCCCCcccch
Q 038787 101 GSIELKCRCGHLYCGTHRYPKEHACTFDFK 130 (153)
Q Consensus 101 gl~gf~CrCg~~FC~~HRy~e~H~C~fDyk 130 (153)
|-.||.|.||...|-.-.--.+..|+-|-|
T Consensus 13 gevgytcdcgekiclygqscndgqcsgdpk 42 (57)
T 1e0f_I 13 GEVGYTCDCGEKICLYGQSCNDGQCSGDPK 42 (57)
T ss_dssp SSCSSCEECSSSEECTTCCBSSSCBCSCCC
T ss_pred CceeeeccCCceeeEecccccCCcccCCCC
Confidence 446899999999998777777788887765
No 117
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=26.85 E-value=25 Score=24.23 Aligned_cols=38 Identities=18% Similarity=0.538 Sum_probs=23.0
Q ss_pred ccccccccccccccceee-ecCceecCCC--CCCCCCCCcccc
Q 038787 90 EKRCEICDKKVGSIELKC-RCGHLYCGTH--RYPKEHACTFDF 129 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~C-rCg~~FC~~H--Ry~e~H~C~fDy 129 (153)
.-.|..|..-+.- ...- .||++||..- ++-+ ..|+.--
T Consensus 22 ~~~C~IC~~~~~~-pv~~~~CgH~fC~~Ci~~~~~-~~CP~Cr 62 (117)
T 1jm7_B 22 LLRCSRCTNILRE-PVCLGGCEHIFCSNCVSDCIG-TGCPVCY 62 (117)
T ss_dssp TTSCSSSCSCCSS-CBCCCSSSCCBCTTTGGGGTT-TBCSSSC
T ss_pred CCCCCCCChHhhC-ccEeCCCCCHHHHHHHHHHhc-CCCcCCC
Confidence 5689999755432 4444 7999999643 2222 4565543
No 118
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.77 E-value=19 Score=23.07 Aligned_cols=27 Identities=22% Similarity=0.485 Sum_probs=19.4
Q ss_pred cccccccccccccceeeecCceecCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTH 117 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 117 (153)
-+|..|++.|....|.=+=|..||..|
T Consensus 44 F~C~~C~~~L~~~~~~~~~~~~yC~~c 70 (82)
T 1x63_A 44 FTCSNCKQVIGTGSFFPKGEDFYCVTC 70 (82)
T ss_dssp CCCSSSCCCCTTSCEEEETTEEEEHHH
T ss_pred CchhhCCCccCCCccEeeCCEEECHHH
Confidence 467788888877666667677777554
No 119
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=26.70 E-value=19 Score=26.62 Aligned_cols=32 Identities=19% Similarity=0.509 Sum_probs=23.2
Q ss_pred cccccccccccc----cccccceeee-cCceecCCCC
Q 038787 87 SALEKRCEICDK----KVGSIELKCR-CGHLYCGTHR 118 (153)
Q Consensus 87 ~~~~~rC~~C~k----kvgl~gf~Cr-Cg~~FC~~HR 118 (153)
+..+-.|..|++ +++.--.+|+ ||++|-+-=-
T Consensus 57 q~akytCPfCGk~~vKR~avGIW~C~~Cgk~fAGGAy 93 (116)
T 3cc2_Z 57 MNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSY 93 (116)
T ss_dssp HHSCEECSSSCCEEEEEEETTEEEETTTCCEEECCSS
T ss_pred hccCCcCCCCCCceeEecCceeEECCCCCCEEECCCc
Confidence 445789999998 3333348999 9999987633
No 120
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.67 E-value=19 Score=23.74 Aligned_cols=10 Identities=20% Similarity=0.786 Sum_probs=5.1
Q ss_pred cccccccccc
Q 038787 91 KRCEICDKKV 100 (153)
Q Consensus 91 ~rC~~C~kkv 100 (153)
.+|..|++.|
T Consensus 26 ~~C~~C~~~I 35 (90)
T 2dar_A 26 PMCAHCNQVI 35 (90)
T ss_dssp CBBSSSCCBC
T ss_pred CCCccCCCEe
Confidence 4555555544
No 121
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=26.63 E-value=21 Score=16.97 Aligned_cols=11 Identities=18% Similarity=0.718 Sum_probs=6.7
Q ss_pred eeee-cCceecC
Q 038787 105 LKCR-CGHLYCG 115 (153)
Q Consensus 105 f~Cr-Cg~~FC~ 115 (153)
|.|. ||..|-.
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 1rik_A 3 FACPECPKRFMR 14 (29)
T ss_dssp EECSSSSCEESC
T ss_pred ccCCCCCchhCC
Confidence 5666 6666643
No 122
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=26.49 E-value=16 Score=17.57 Aligned_cols=11 Identities=18% Similarity=0.757 Sum_probs=6.4
Q ss_pred eeee-cCceecC
Q 038787 105 LKCR-CGHLYCG 115 (153)
Q Consensus 105 f~Cr-Cg~~FC~ 115 (153)
|.|. ||..|-.
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1paa_A 3 YACGLCNRAFTR 14 (30)
T ss_dssp SBCTTTCCBCSS
T ss_pred cCCcccCcccCC
Confidence 5565 6666643
No 123
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.49 E-value=18 Score=23.59 Aligned_cols=13 Identities=23% Similarity=0.424 Sum_probs=9.9
Q ss_pred ccccccccccccc
Q 038787 89 LEKRCEICDKKVG 101 (153)
Q Consensus 89 ~~~rC~~C~kkvg 101 (153)
.+-.|..|.|...
T Consensus 23 ~~~~C~~C~k~f~ 35 (98)
T 2gqj_A 23 GEAVCPTCNVVTR 35 (98)
T ss_dssp SCCCCTTTCCCCS
T ss_pred CCcCCCCCCCChh
Confidence 4578888888766
No 124
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=26.35 E-value=17 Score=17.11 Aligned_cols=11 Identities=27% Similarity=0.736 Sum_probs=6.7
Q ss_pred eeee-cCceecC
Q 038787 105 LKCR-CGHLYCG 115 (153)
Q Consensus 105 f~Cr-Cg~~FC~ 115 (153)
|.|. ||..|..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 2m0e_A 3 HKCPHCDKKFNQ 14 (29)
T ss_dssp CCCSSCCCCCCT
T ss_pred CcCCCCCcccCC
Confidence 5566 6666654
No 125
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=26.33 E-value=16 Score=17.36 Aligned_cols=10 Identities=20% Similarity=0.716 Sum_probs=5.4
Q ss_pred eeee-cCceec
Q 038787 105 LKCR-CGHLYC 114 (153)
Q Consensus 105 f~Cr-Cg~~FC 114 (153)
|.|. ||..|-
T Consensus 3 ~~C~~C~k~f~ 13 (30)
T 1klr_A 3 YQCQYCEFRSA 13 (30)
T ss_dssp CCCSSSSCCCS
T ss_pred ccCCCCCCccC
Confidence 4555 555553
No 126
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.20 E-value=27 Score=18.19 Aligned_cols=12 Identities=17% Similarity=0.227 Sum_probs=7.4
Q ss_pred ceeee-cCceecC
Q 038787 104 ELKCR-CGHLYCG 115 (153)
Q Consensus 104 gf~Cr-Cg~~FC~ 115 (153)
.|+|. ||..|-.
T Consensus 9 ~~~C~~C~k~f~~ 21 (37)
T 2elm_A 9 LYYCSQCHYSSIT 21 (37)
T ss_dssp EEECSSSSCEEEC
T ss_pred CeECCCCCcccCC
Confidence 46676 6666643
No 127
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=26.16 E-value=53 Score=20.91 Aligned_cols=27 Identities=19% Similarity=0.535 Sum_probs=18.9
Q ss_pred cccccccccccccc--------------cceeee-cCceecC
Q 038787 89 LEKRCEICDKKVGS--------------IELKCR-CGHLYCG 115 (153)
Q Consensus 89 ~~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC~ 115 (153)
.+-.|..|.+.... ..|.|. |+..|-.
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 57 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRR 57 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCC
Confidence 45788888876542 348887 8888854
No 128
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=26.05 E-value=17 Score=23.71 Aligned_cols=23 Identities=35% Similarity=0.657 Sum_probs=19.8
Q ss_pred cccccccccccccccceeee-cCc
Q 038787 89 LEKRCEICDKKVGSIELKCR-CGH 111 (153)
Q Consensus 89 ~~~rC~~C~kkvgl~gf~Cr-Cg~ 111 (153)
+..-|..|.-++....-.|| ||+
T Consensus 18 ~k~ICrkC~ARnp~~A~~CRKCg~ 41 (56)
T 2ayj_A 18 LKKVCRKCGALNPIRATKCRRCHS 41 (56)
T ss_dssp CCEEETTTCCEECTTCSSCTTTCC
T ss_pred chhhhccccCcCCcccccccCCCC
Confidence 46789999999999999999 874
No 129
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=25.36 E-value=23 Score=23.49 Aligned_cols=11 Identities=18% Similarity=0.477 Sum_probs=7.4
Q ss_pred ccccccccccc
Q 038787 90 EKRCEICDKKV 100 (153)
Q Consensus 90 ~~rC~~C~kkv 100 (153)
+-.|..|+|..
T Consensus 34 ~~~C~~C~k~F 44 (96)
T 2ctd_A 34 SVSCPTCQAVG 44 (96)
T ss_dssp CEECTTTCSCE
T ss_pred CcCCCCCCCCc
Confidence 45677777766
No 130
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.29 E-value=26 Score=17.85 Aligned_cols=11 Identities=18% Similarity=0.646 Sum_probs=6.0
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2elv_A 9 LYDCHICERKFK 20 (36)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCCccC
Confidence 45565 555553
No 131
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=31.06 E-value=15 Score=17.72 Aligned_cols=13 Identities=23% Similarity=0.787 Sum_probs=8.0
Q ss_pred ceeee-cCceecCC
Q 038787 104 ELKCR-CGHLYCGT 116 (153)
Q Consensus 104 gf~Cr-Cg~~FC~~ 116 (153)
.|.|. ||..|-..
T Consensus 2 ~~~C~~C~k~f~~~ 15 (29)
T 2lvt_A 2 PCQCVMCGKAFTQA 15 (29)
Confidence 35676 77777543
No 132
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.78 E-value=59 Score=19.82 Aligned_cols=37 Identities=24% Similarity=0.568 Sum_probs=23.1
Q ss_pred ccccccccccccccceeeecCceecCCC---CCCCCCCCccc
Q 038787 90 EKRCEICDKKVGSIELKCRCGHLYCGTH---RYPKEHACTFD 128 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~CrCg~~FC~~H---Ry~e~H~C~fD 128 (153)
...|..|...+.. ..-.||++||..= .+.....|++-
T Consensus 15 ~~~C~IC~~~~~~--~~~~CgH~fc~~Ci~~~~~~~~~CP~C 54 (70)
T 2ecn_A 15 EEECCICMDGRAD--LILPCAHSFCQKCIDKWSDRHRNCPIC 54 (70)
T ss_dssp CCCCSSSCCSCCS--EEETTTEEECHHHHHHSSCCCSSCHHH
T ss_pred CCCCeeCCcCccC--cccCCCCcccHHHHHHHHHCcCcCCCc
Confidence 5689999877554 4556999998521 12234556543
No 133
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.74 E-value=63 Score=19.91 Aligned_cols=26 Identities=19% Similarity=0.503 Sum_probs=17.7
Q ss_pred ccccccccccccc--cceeeecCceecC
Q 038787 90 EKRCEICDKKVGS--IELKCRCGHLYCG 115 (153)
Q Consensus 90 ~~rC~~C~kkvgl--~gf~CrCg~~FC~ 115 (153)
...|..|...+.. .-....||++||.
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~f~~ 42 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCKHAFHR 42 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTTEEEEH
T ss_pred CCCCcCCCcccCCCCcEEEcCCCCEecH
Confidence 4689999877543 2234469999985
No 134
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=24.34 E-value=20 Score=24.79 Aligned_cols=12 Identities=25% Similarity=0.764 Sum_probs=9.8
Q ss_pred ccceeeecCcee
Q 038787 102 SIELKCRCGHLY 113 (153)
Q Consensus 102 l~gf~CrCg~~F 113 (153)
...+.||||..|
T Consensus 28 ~y~y~CrCGd~F 39 (83)
T 1wge_A 28 TYFYPCPCGDNF 39 (83)
T ss_dssp EEEECCSSSSCE
T ss_pred EEEEeCCCCCEE
Confidence 346889999988
No 135
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=24.10 E-value=33 Score=20.44 Aligned_cols=12 Identities=17% Similarity=0.570 Sum_probs=8.0
Q ss_pred cccccccccccc
Q 038787 89 LEKRCEICDKKV 100 (153)
Q Consensus 89 ~~~rC~~C~kkv 100 (153)
.+-.|..|.+..
T Consensus 8 ~~~~C~~C~k~f 19 (70)
T 1x5w_A 8 HPEKCSECSYSC 19 (70)
T ss_dssp CSEECSSSSCEE
T ss_pred CCeECCCCCccc
Confidence 356788887754
No 136
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.77 E-value=27 Score=17.79 Aligned_cols=11 Identities=18% Similarity=0.845 Sum_probs=5.7
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2els_A 9 IFTCEYCNKVFK 20 (36)
T ss_dssp CEECTTTCCEES
T ss_pred CEECCCCCceeC
Confidence 35554 555553
No 137
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.47 E-value=42 Score=20.42 Aligned_cols=26 Identities=31% Similarity=0.806 Sum_probs=18.3
Q ss_pred ccccccccccccccceeeecCceecCC
Q 038787 90 EKRCEICDKKVGSIELKCRCGHLYCGT 116 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~CrCg~~FC~~ 116 (153)
...|..|...+.. ...-.||++||..
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~~ 40 (66)
T 2ecy_A 15 KYKCEKCHLVLCS-PKQTECGHRFCES 40 (66)
T ss_dssp CEECTTTCCEESS-CCCCSSSCCCCHH
T ss_pred CCCCCCCChHhcC-eeECCCCCHHHHH
Confidence 5689999765433 3445899999963
No 138
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=23.28 E-value=50 Score=21.78 Aligned_cols=27 Identities=19% Similarity=0.581 Sum_probs=18.8
Q ss_pred cccccccccccccc--------------cceeee-cCceecC
Q 038787 89 LEKRCEICDKKVGS--------------IELKCR-CGHLYCG 115 (153)
Q Consensus 89 ~~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC~ 115 (153)
+.-.|..|+|.... ..|.|. ||..|-.
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~ 68 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYS 68 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESS
T ss_pred CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCC
Confidence 35679999886443 368887 8887753
No 139
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=23.28 E-value=24 Score=19.90 Aligned_cols=13 Identities=23% Similarity=0.764 Sum_probs=8.3
Q ss_pred cceeee-cCceecC
Q 038787 103 IELKCR-CGHLYCG 115 (153)
Q Consensus 103 ~gf~Cr-Cg~~FC~ 115 (153)
..|+|. ||..|-.
T Consensus 7 kp~~C~~CgK~F~~ 20 (36)
T 1fv5_A 7 ARFMCLPCGIAFSS 20 (36)
T ss_dssp CCCEETTTTEECSC
T ss_pred cCeECCCCCCccCC
Confidence 456776 7777754
No 140
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=23.26 E-value=26 Score=24.11 Aligned_cols=33 Identities=18% Similarity=0.426 Sum_probs=23.8
Q ss_pred ccccccccccccccc----cceeee-cCceecCCCCCC
Q 038787 88 ALEKRCEICDKKVGS----IELKCR-CGHLYCGTHRYP 120 (153)
Q Consensus 88 ~~~~rC~~C~kkvgl----~gf~Cr-Cg~~FC~~HRy~ 120 (153)
...-.|..|++.+-. .-.+|+ ||++|-+-=-.|
T Consensus 25 ~~~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~aggay~~ 62 (83)
T 1vq8_Z 25 NEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYKP 62 (83)
T ss_dssp HSCEECSSSCCEEEEEEETTEEEETTTCCEEECCSSSS
T ss_pred cccCcCCCCCCcceeccCCCeEECCCCCCEecCCEecc
Confidence 346789999985433 248999 999998864433
No 141
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=23.17 E-value=42 Score=20.90 Aligned_cols=47 Identities=26% Similarity=0.469 Sum_probs=28.1
Q ss_pred ccccccccccccccceeeecCceecCC--CCCC--------CCCCCcccchhhhHHHH
Q 038787 90 EKRCEICDKKVGSIELKCRCGHLYCGT--HRYP--------KEHACTFDFKKFDRETL 137 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~CrCg~~FC~~--HRy~--------e~H~C~fDyk~~~r~~l 137 (153)
...|..|...+.- ...-.||++||.. .++- ....|++--.....+.|
T Consensus 12 ~~~C~IC~~~~~~-p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~l 68 (79)
T 2egp_A 12 EVTCPICLELLTE-PLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHL 68 (79)
T ss_dssp CCEETTTTEECSS-CCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSGG
T ss_pred CCCCcCCCcccCC-eeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhhC
Confidence 4689999865433 3445799999953 2221 14578776655444333
No 142
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=23.10 E-value=54 Score=29.27 Aligned_cols=42 Identities=19% Similarity=0.331 Sum_probs=28.4
Q ss_pred cccccccccccc-cc--cceeee-cCceecCCCCCCCCCCCcccch
Q 038787 89 LEKRCEICDKKV-GS--IELKCR-CGHLYCGTHRYPKEHACTFDFK 130 (153)
Q Consensus 89 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk 130 (153)
.+..|..|++.+ || +|++|. |+..+-..---.....|..|..
T Consensus 112 ~~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~d~~ 157 (674)
T 3pfq_A 112 SPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNVPSLCGTDHT 157 (674)
T ss_dssp SCCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTSSSCCCSSSCSS
T ss_pred CCCCCCccccccchhhcCccccccCCcchhhhhhhccCcccccccc
Confidence 367999999875 45 799999 9887633333333456766544
No 143
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=23.04 E-value=31 Score=23.33 Aligned_cols=30 Identities=23% Similarity=0.578 Sum_probs=21.2
Q ss_pred cccccccccccc-cccc--cc-eeee-cCceecCC
Q 038787 87 SALEKRCEICDK-KVGS--IE-LKCR-CGHLYCGT 116 (153)
Q Consensus 87 ~~~~~rC~~C~k-kvgl--~g-f~Cr-Cg~~FC~~ 116 (153)
|..+-.|..|+| +|.- +| -+|+ |+.+|=+-
T Consensus 24 q~~ky~C~fCgk~~vkR~a~GIW~C~~C~~~~AGG 58 (73)
T 1ffk_W 24 HKKKYKCPVCGFPKLKRASTSIWVCGHCGYKIAGG 58 (73)
T ss_pred cccCccCCCCCCceeEEEEeEEEECCCCCcEEECC
Confidence 445789999997 2222 23 7899 99998765
No 144
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=23.03 E-value=22 Score=23.72 Aligned_cols=22 Identities=32% Similarity=0.937 Sum_probs=17.3
Q ss_pred cccccccccccccc---ceeee-cCc
Q 038787 90 EKRCEICDKKVGSI---ELKCR-CGH 111 (153)
Q Consensus 90 ~~rC~~C~kkvgl~---gf~Cr-Cg~ 111 (153)
.-.|..|+..+.+. ...|+ ||+
T Consensus 28 ~Y~C~~CG~~~e~~~~d~irCp~CG~ 53 (70)
T 1twf_L 28 KYICAECSSKLSLSRTDAVRCKDCGH 53 (70)
T ss_dssp CEECSSSCCEECCCTTSTTCCSSSCC
T ss_pred EEECCCCCCcceeCCCCCccCCCCCc
Confidence 56899999997773 57887 776
No 145
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.01 E-value=18 Score=23.85 Aligned_cols=26 Identities=27% Similarity=0.643 Sum_probs=13.7
Q ss_pred cccccccccccccceeeecCceecCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGT 116 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~ 116 (153)
-+|..|++.|....|.=+=|..||..
T Consensus 43 F~C~~C~~~L~~~~~~~~~g~~yC~~ 68 (91)
T 2d8y_A 43 FRCSYCNNKLSLGTYASLHGRIYCKP 68 (91)
T ss_dssp CBCTTTCCBCCTTTCCCSSSCCCCHH
T ss_pred CeeCCCCCCCCCCCcEeECCEEECHH
Confidence 35556666665544444444555543
No 146
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=22.93 E-value=36 Score=17.91 Aligned_cols=11 Identities=27% Similarity=0.881 Sum_probs=6.0
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 11 ~~~C~~C~k~f~ 22 (42)
T 2epc_A 11 PYLCGQCGKSFT 22 (42)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCcccC
Confidence 45565 555554
No 147
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=22.91 E-value=31 Score=23.06 Aligned_cols=18 Identities=22% Similarity=0.711 Sum_probs=14.7
Q ss_pred cceeee-cCceecCCCCCC
Q 038787 103 IELKCR-CGHLYCGTHRYP 120 (153)
Q Consensus 103 ~gf~Cr-Cg~~FC~~HRy~ 120 (153)
....|. |+..||..++.+
T Consensus 42 ~~v~C~~C~~~FC~~C~~~ 60 (86)
T 2ct7_A 42 LEATCPQCHQTFCVRCKRQ 60 (86)
T ss_dssp SCEECTTTCCEECSSSCSB
T ss_pred CceEeCCCCCccccccCCc
Confidence 347895 999999999874
No 148
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=22.53 E-value=38 Score=21.27 Aligned_cols=25 Identities=32% Similarity=0.574 Sum_probs=19.3
Q ss_pred cccccccccccccceeeecCceecC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCG 115 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~ 115 (153)
-+|..|++.|....|.=+=|..||.
T Consensus 28 F~C~~C~~~L~~~~~~~~~g~~yC~ 52 (76)
T 1iml_A 28 LKCEKCGKTLTSGGHAEHEGKPYCN 52 (76)
T ss_dssp CBCTTTCCBCCTTTEEEETTEEEET
T ss_pred CCccccCccCCCCceECcCCeEeeC
Confidence 4778888888776677677778886
No 149
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=22.46 E-value=40 Score=20.47 Aligned_cols=27 Identities=26% Similarity=0.662 Sum_probs=17.8
Q ss_pred ccccccccccccccceeeecCceecCC
Q 038787 90 EKRCEICDKKVGSIELKCRCGHLYCGT 116 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~CrCg~~FC~~ 116 (153)
...|..|...+.-....=.||++||..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~fc~~ 31 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAFCYV 31 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTT
T ss_pred CCCCeeCCccccCCcEecCCCCeeHHH
Confidence 457888887654422344599999863
No 150
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.37 E-value=37 Score=18.34 Aligned_cols=11 Identities=27% Similarity=1.029 Sum_probs=5.9
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 12 ~~~C~~C~k~F~ 23 (44)
T 2epv_A 12 PYECNECGKAFI 23 (44)
T ss_dssp SEECSSSCCEES
T ss_pred CeECCCCCcccC
Confidence 45555 555553
No 151
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=22.33 E-value=35 Score=24.21 Aligned_cols=37 Identities=19% Similarity=0.499 Sum_probs=23.2
Q ss_pred cccccccccccccceeeecCceecCCC---CCCCCCCCccc
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTH---RYPKEHACTFD 128 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~H---Ry~e~H~C~fD 128 (153)
..|..|...+- .+....||++||..- -+.....|++-
T Consensus 54 ~~C~iC~~~~~-~~~~~~CgH~fc~~Ci~~~~~~~~~CP~C 93 (138)
T 4ayc_A 54 LQCIICSEYFI-EAVTLNCAHSFCSYCINEWMKRKIECPIC 93 (138)
T ss_dssp SBCTTTCSBCS-SEEEETTSCEEEHHHHHHHTTTCSBCTTT
T ss_pred CCCcccCcccC-CceECCCCCCccHHHHHHHHHcCCcCCCC
Confidence 47999986543 345567999999532 12234567654
No 152
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=22.30 E-value=22 Score=22.43 Aligned_cols=27 Identities=15% Similarity=0.455 Sum_probs=17.8
Q ss_pred cccccccccccccceeeecCceecCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTH 117 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 117 (153)
-+|..|++.|.-..|.=+=|..||..|
T Consensus 47 F~C~~C~~~L~~~~f~~~~~~~yC~~c 73 (77)
T 2egq_A 47 FHCKKCSVNLANKRFVFHQEQVYCPDC 73 (77)
T ss_dssp CBCSSSCCBCTTSCCCEETTEECCHHH
T ss_pred CEehhcCCCCCCCccEeECCEEEChHH
Confidence 467788887765556666666676543
No 153
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=22.20 E-value=32 Score=25.03 Aligned_cols=27 Identities=26% Similarity=0.637 Sum_probs=19.4
Q ss_pred cccccccccccccccceee-ecCceecCC
Q 038787 89 LEKRCEICDKKVGSIELKC-RCGHLYCGT 116 (153)
Q Consensus 89 ~~~rC~~C~kkvgl~gf~C-rCg~~FC~~ 116 (153)
..-.|..|..-+.- .... .||++||..
T Consensus 53 ~~~~C~IC~~~~~~-p~~~~~CgH~fC~~ 80 (165)
T 2ckl_B 53 SELMCPICLDMLKN-TMTTKECLHRFCAD 80 (165)
T ss_dssp HHHBCTTTSSBCSS-EEEETTTCCEEEHH
T ss_pred CCCCCcccChHhhC-cCEeCCCCChhHHH
Confidence 35689999765443 4555 899999963
No 154
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.01 E-value=26 Score=17.70 Aligned_cols=8 Identities=38% Similarity=1.244 Sum_probs=3.5
Q ss_pred cccccccc
Q 038787 91 KRCEICDK 98 (153)
Q Consensus 91 ~rC~~C~k 98 (153)
-.|..|.|
T Consensus 10 ~~C~~C~k 17 (36)
T 2elr_A 10 HLCDMCGK 17 (36)
T ss_dssp CBCTTTCC
T ss_pred eecCcCCC
Confidence 34444443
No 155
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=21.62 E-value=72 Score=19.33 Aligned_cols=26 Identities=27% Similarity=0.549 Sum_probs=17.1
Q ss_pred ccccccccccccc--cceeeecCceecC
Q 038787 90 EKRCEICDKKVGS--IELKCRCGHLYCG 115 (153)
Q Consensus 90 ~~rC~~C~kkvgl--~gf~CrCg~~FC~ 115 (153)
...|..|...+.. ....-.||++||.
T Consensus 14 ~~~C~IC~~~~~~~~~~~~~~C~H~fc~ 41 (69)
T 2kiz_A 14 EEKCTICLSILEEGEDVRRLPCMHLFHQ 41 (69)
T ss_dssp CCSBTTTTBCCCSSSCEEECTTSCEEEH
T ss_pred CCCCeeCCccccCCCcEEEeCCCCHHHH
Confidence 4689999766543 1233459999985
No 156
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.56 E-value=26 Score=22.22 Aligned_cols=27 Identities=19% Similarity=0.276 Sum_probs=18.1
Q ss_pred cccccccccccccceeeecCceecCCC
Q 038787 91 KRCEICDKKVGSIELKCRCGHLYCGTH 117 (153)
Q Consensus 91 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 117 (153)
-+|..|++.|....|.=+=|..||..|
T Consensus 42 F~C~~C~~~L~~~~~~~~~~~~yC~~~ 68 (80)
T 1x3h_A 42 FVCGDCFTSFSTGSFFELDGRPFCELH 68 (80)
T ss_dssp CBCSSSCCBSCSSCCEESSSCEECHHH
T ss_pred CChhhCCCCCCCCcEEeECCEEECHHH
Confidence 467788888766556656666666554
No 157
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=21.34 E-value=40 Score=28.93 Aligned_cols=42 Identities=26% Similarity=0.450 Sum_probs=26.6
Q ss_pred cccccccccccc-cc--cceeee-cCceecCCCCCCCCCCCcccch
Q 038787 89 LEKRCEICDKKV-GS--IELKCR-CGHLYCGTHRYPKEHACTFDFK 130 (153)
Q Consensus 89 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk 130 (153)
.+..|..|++.+ |+ +|++|+ ||...=......-...|.-+.+
T Consensus 219 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~vp~~C~~~~~ 264 (463)
T 3cxl_A 219 GPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLK 264 (463)
T ss_dssp SCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTTSCSBCCGGGG
T ss_pred CCCcchhhhhhhhhHHhcCeeccccCcccccccccccccccccccc
Confidence 478999999876 55 599999 8776411111111346766654
No 158
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=26.81 E-value=20 Score=17.15 Aligned_cols=13 Identities=15% Similarity=0.570 Sum_probs=8.1
Q ss_pred ceeee-cCceecCC
Q 038787 104 ELKCR-CGHLYCGT 116 (153)
Q Consensus 104 gf~Cr-Cg~~FC~~ 116 (153)
.|.|. ||..|-..
T Consensus 3 ~~~C~~C~k~f~~~ 16 (30)
T 2lvr_A 3 PYVCIHCQRQFADP 16 (30)
Confidence 36666 77777543
No 159
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=21.29 E-value=33 Score=22.68 Aligned_cols=41 Identities=22% Similarity=0.424 Sum_probs=25.0
Q ss_pred ccccccccccccccceee-ecCceecCCC---CCCCCCCCcccchh
Q 038787 90 EKRCEICDKKVGSIELKC-RCGHLYCGTH---RYPKEHACTFDFKK 131 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~C-rCg~~FC~~H---Ry~e~H~C~fDyk~ 131 (153)
...|..|...+.- .... .||++||..- .+.....|+.--..
T Consensus 22 ~~~C~IC~~~~~~-p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~ 66 (99)
T 2y43_A 22 LLRCGICFEYFNI-AMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVT 66 (99)
T ss_dssp HTBCTTTCSBCSS-EEECTTTCCEEEHHHHHHHHTTCCBCTTTCCB
T ss_pred CCCcccCChhhCC-cCEECCCCCHhhHHHHHHHHHCCCCCCCCCCc
Confidence 4689999866543 4455 7999998621 12233567655443
No 160
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=21.01 E-value=83 Score=19.53 Aligned_cols=27 Identities=19% Similarity=0.500 Sum_probs=18.0
Q ss_pred cccccccccccccc--ceeeecCceecCC
Q 038787 90 EKRCEICDKKVGSI--ELKCRCGHLYCGT 116 (153)
Q Consensus 90 ~~rC~~C~kkvgl~--gf~CrCg~~FC~~ 116 (153)
...|..|...+... ...-.||++||..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~fc~~ 43 (78)
T 2ect_A 15 GLECPVCKEDYALGESVRQLPCNHLFHDS 43 (78)
T ss_dssp SCCCTTTTSCCCTTSCEEECTTSCEEETT
T ss_pred CCCCeeCCccccCCCCEEEeCCCCeecHH
Confidence 46899997765432 2233599999864
No 161
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.70 E-value=41 Score=18.22 Aligned_cols=11 Identities=27% Similarity=1.090 Sum_probs=5.4
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 12 ~~~C~~C~k~F~ 23 (46)
T 2ytp_A 12 HYECSECGKAFA 23 (46)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCcCCcccC
Confidence 35555 555553
No 162
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=20.54 E-value=34 Score=19.24 Aligned_cols=13 Identities=31% Similarity=0.772 Sum_probs=8.2
Q ss_pred cceeee-cCceecC
Q 038787 103 IELKCR-CGHLYCG 115 (153)
Q Consensus 103 ~gf~Cr-Cg~~FC~ 115 (153)
..|.|. ||..|-.
T Consensus 6 kp~~C~~C~k~F~~ 19 (48)
T 3iuf_A 6 KPYACDICGKRYKN 19 (48)
T ss_dssp SCEECTTTCCEESS
T ss_pred cCEECCCcCcccCC
Confidence 356776 7777754
No 163
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=20.50 E-value=36 Score=17.78 Aligned_cols=11 Identities=18% Similarity=0.688 Sum_probs=5.4
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 6 ~~~C~~C~k~f~ 17 (39)
T 1njq_A 6 SYTCSFCKREFR 17 (39)
T ss_dssp SEECTTTCCEES
T ss_pred ceECCCCCcccC
Confidence 34554 555553
No 164
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.50 E-value=39 Score=18.18 Aligned_cols=11 Identities=36% Similarity=1.056 Sum_probs=5.5
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2eow_A 12 PYKCNECGKAFR 23 (46)
T ss_dssp CEECTTSCCEES
T ss_pred CeeccccCChhc
Confidence 45554 555554
No 165
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.48 E-value=42 Score=18.12 Aligned_cols=11 Identities=27% Similarity=1.041 Sum_probs=5.8
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 12 ~~~C~~C~k~F~ 23 (46)
T 2emi_A 12 HYECSECGKAFI 23 (46)
T ss_dssp CEECSSSCCEES
T ss_pred CCCCCCCCcccC
Confidence 45555 555554
No 166
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.46 E-value=38 Score=18.32 Aligned_cols=11 Identities=27% Similarity=1.014 Sum_probs=5.1
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 12 ~~~C~~C~k~F~ 23 (45)
T 2epu_A 12 PFECTHCGKSFR 23 (45)
T ss_dssp SEEETTTTEEES
T ss_pred CccCCCCCCccC
Confidence 34454 444443
No 167
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=20.41 E-value=38 Score=22.82 Aligned_cols=40 Identities=18% Similarity=0.290 Sum_probs=24.1
Q ss_pred ccccccccccccccceee-ecCceecCCC---CCCCCCCCcccch
Q 038787 90 EKRCEICDKKVGSIELKC-RCGHLYCGTH---RYPKEHACTFDFK 130 (153)
Q Consensus 90 ~~rC~~C~kkvgl~gf~C-rCg~~FC~~H---Ry~e~H~C~fDyk 130 (153)
.-.|..|..-+. ..... .||++||..- .+.....|+.--+
T Consensus 15 ~~~C~IC~~~~~-~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~ 58 (108)
T 2ckl_A 15 HLMCVLCGGYFI-DATTIIECLHSFCKTCIVRYLETSKYCPICDV 58 (108)
T ss_dssp GTBCTTTSSBCS-SEEEETTTCCEEEHHHHHHHHTSCSBCTTTCC
T ss_pred cCCCccCChHHh-CcCEeCCCCChhhHHHHHHHHHhCCcCcCCCc
Confidence 468999976543 35566 8999998531 1222356655433
No 168
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=20.25 E-value=42 Score=18.22 Aligned_cols=11 Identities=27% Similarity=0.860 Sum_probs=5.2
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2el6_A 12 PYKCSQCEKSFS 23 (46)
T ss_dssp SEECSSSSCEES
T ss_pred CeECCCCCcccC
Confidence 34554 554443
No 169
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=20.21 E-value=43 Score=17.61 Aligned_cols=11 Identities=27% Similarity=0.993 Sum_probs=5.8
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 10 ~~~C~~C~k~f~ 21 (42)
T 2el5_A 10 PYECSECGKAFN 21 (42)
T ss_dssp SEECSSSCCEES
T ss_pred CccCCCcChhhC
Confidence 45555 555553
No 170
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.15 E-value=43 Score=18.00 Aligned_cols=11 Identities=18% Similarity=0.824 Sum_probs=5.8
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2ytf_A 12 PFECSECQKAFN 23 (46)
T ss_dssp SEECSSSCCEES
T ss_pred CcCCCCCCcccC
Confidence 45555 555554
No 171
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=20.08 E-value=40 Score=17.50 Aligned_cols=12 Identities=33% Similarity=0.944 Sum_probs=8.3
Q ss_pred cceeee---cCceec
Q 038787 103 IELKCR---CGHLYC 114 (153)
Q Consensus 103 ~gf~Cr---Cg~~FC 114 (153)
..|.|. ||..|-
T Consensus 7 k~~~C~~~~C~k~f~ 21 (37)
T 1va1_A 7 KQHICHIQGCGKVYG 21 (37)
T ss_dssp CCEECCSTTCCCEES
T ss_pred CCCCCCCCCCCCccC
Confidence 357786 887774
No 172
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.01 E-value=30 Score=18.21 Aligned_cols=11 Identities=27% Similarity=1.093 Sum_probs=5.2
Q ss_pred ceeee-cCceec
Q 038787 104 ELKCR-CGHLYC 114 (153)
Q Consensus 104 gf~Cr-Cg~~FC 114 (153)
.|.|. ||..|-
T Consensus 11 ~~~C~~C~k~f~ 22 (42)
T 2ytb_A 11 PYRCDQCGKAFS 22 (42)
T ss_dssp SBCCTTTTCCBS
T ss_pred CeeCCCccchhC
Confidence 34444 554453
Done!