BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038789
(122 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 17 RDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSN 76
+DE+ W+ F P+ FL ++ F+ + +PF AGRR C PL L+ SL
Sbjct: 382 KDEAVWEKPFRFHPEHFLDAQGHFV-KPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQ 440
Query: 77 SFDWKLDLPYGHGRKIRPSHTG 98
F + +P G + RPSH G
Sbjct: 441 HFSF--SVPTG---QPRPSHHG 457
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 17 RDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSN 76
+DE+ W+ F P+ FL ++ F+ + +PF AGRR C PL L+ SL
Sbjct: 382 KDEAVWEKPFRFHPEHFLDAQGHFV-KPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQ 440
Query: 77 SFDWKLDLPYGHGRKIRPSHTG 98
F + +P G + RPSH G
Sbjct: 441 HFSF--SVPTG---QPRPSHHG 457
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 14 ATSRDESTWDHAHSFMPKRFLG-SEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRG 72
A +E W FMP+RFL + I + +PFGAG R C L L+ +
Sbjct: 380 ALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMA 439
Query: 73 SLSNSFDWKLDLP 85
L FD L++P
Sbjct: 440 WLLQRFD--LEVP 450
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 18 DESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRIC 57
DE+ W+ H F P RFL G N ++ FG G R+C
Sbjct: 393 DETVWEQPHEFRPDRFLEP-----GANPSALAFGCGARVC 427
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 32.7 bits (73), Expect = 0.050, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 19 ESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRIC 57
E ++ +H F P+R+L E F +PFG G+R+C
Sbjct: 394 EDNFEDSHKFRPERWLQKEKKI--NPFAHLPFGIGKRMC 430
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 31.6 bits (70), Expect = 0.13, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 2 AELLQNPEALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLP 61
A+++ +P A+ RD ++D F P R+L + + + PF AG+R CP
Sbjct: 360 ADIIYSPYAIQ----RDPKSYDDNLEFDPDRWLPERAANVPK-YAMKPFSAGKRKCPSDH 414
Query: 62 LDITMLYPLRGSLSNSFDWK 81
+ L + +L+ + ++
Sbjct: 415 FSMAQLTLITAALATKYRFE 434
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 31.2 bits (69), Expect = 0.13, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 12 SKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRIC 57
S A RD W F+P+RF D I + PFG+G R C
Sbjct: 378 SYALHRDPKYWTEPEKFLPERFSKKNKDNID-PYIYTPFGSGPRNC 422
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 12 SKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRIC 57
S A RD W F+P+RF D I + PFG+G R C
Sbjct: 376 SYALHRDPKYWTEPEKFLPERFSKKNKDNID-PYIYTPFGSGPRNC 420
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 12 SKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRIC 57
S A RD W F+P+RF D I + PFG+G R C
Sbjct: 377 SYALHRDPKYWTEPEKFLPERFSKKNKDNID-PYIYTPFGSGPRNC 421
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 30.4 bits (67), Expect = 0.27, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 17 RDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRIC 57
R+ + + + P+R+L ++ GRNF +PFG G R C
Sbjct: 386 RNAALFPRPERYNPQRWL--DIRGSGRNFHHVPFGFGMRQC 424
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 30.4 bits (67), Expect = 0.29, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Query: 14 ATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAG 53
T+ D WDH F P+RF E + F IP G G
Sbjct: 320 GTNHDPRLWDHPDEFRPERFAEREENL----FDMIPQGGG 355
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 18 DESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRIC 57
DE W F P+RFL S + + +PF GRR C
Sbjct: 384 DEKYWRDPEVFHPERFLDSS-GYFAKKEALVPFSLGRRHC 422
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 18 DESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRIC 57
DE W F P+RFL S + + +PF GRR C
Sbjct: 384 DEKYWRDPEVFHPERFLDSS-GYFAKKEALVPFSLGRRHC 422
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 29.6 bits (65), Expect = 0.45, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 17 RDESTW-DHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLS 75
RD++ W D F P+RF FK PFG G+R CP + + G +
Sbjct: 363 RDKTIWGDDVEEFRPERFENPSA-IPQHAFK--PFGNGQRACPGQQFALHEATLVLGMML 419
Query: 76 NSFDWK 81
FD++
Sbjct: 420 KHFDFE 425
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 26 HSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLP 85
H F+P R+ + + + IPFGAGR C I + + L +++++ P
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP 422
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 29.3 bits (64), Expect = 0.57, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 26 HSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLP 85
H F+P R+ + + + IPFGAGR C I + + L +++++ P
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP 422
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 29.3 bits (64), Expect = 0.57, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 26 HSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLP 85
H F+P R+ + + + IPFGAGR C I + + L +++++ P
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP 422
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 29.3 bits (64), Expect = 0.57, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 26 HSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLP 85
H F+P R+ + + + IPFGAGR C I + + L +++++ P
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP 422
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 14 ATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRIC 57
R + +W F P R+L + G F +PFGAGR C
Sbjct: 359 VNQRLKDSWVERLDFNPDRYL-QDNPASGEKFAYVPFGAGRHRC 401
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 24 HAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRIC 57
+F P+RFL GR F PFG G+R+C
Sbjct: 306 EGEAFQPERFLAERGTPSGRYF---PFGLGQRLC 336
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 28.5 bits (62), Expect = 0.93, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 18 DESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRIC 57
D + + F P+ FL +F N+ +PF AG+RIC
Sbjct: 380 DNKEFPNPEMFDPRHFLDEGGNFKKSNY-FMPFSAGKRIC 418
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Query: 18 DESTWDHAHSFMPKRFLGSEVDFIGRNFKS----IPFGAGRRICPDLPLDITMLYPLRGS 73
D + + F P FL G NFK +PF AG+RIC L L+ S
Sbjct: 378 DNKEFPNPEMFDPHHFLDE-----GGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTS 432
Query: 74 LSNSFDWK 81
+ +F+ K
Sbjct: 433 ILQNFNLK 440
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 10 ALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYP 69
AL + D+ + + + F P FL +F ++ +PF AG+RIC L L+
Sbjct: 371 ALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY-FMPFSAGKRICAGEGLARMELFL 429
Query: 70 LRGSLSNSFDWK 81
++ +F+ K
Sbjct: 430 FLTTILQNFNLK 441
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 18 DESTWDHAHSFMPKRFLGSE--VDFIGRNFKSIPFGAGRRIC 57
D+ W + F+P+RFL + +D + K I FG G+R C
Sbjct: 390 DQKLWVNPSEFLPERFLTPDGAIDKVLSE-KVIIFGMGKRKC 430
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Query: 18 DESTWDHAHSFMPKRFLGSEVDFIGRNFKS----IPFGAGRRICPDLPLDITMLYPLRGS 73
D + + F P FL G NFK +PF AG+RIC L L+ S
Sbjct: 380 DNKEFPNPEMFDPHHFLDE-----GGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTS 434
Query: 74 LSNSFDWK 81
+ +F+ K
Sbjct: 435 ILQNFNLK 442
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 15 TSRDESTWDHAHSFMPKRFLGSEVDFIGRNF--KSIPFGAGRRIC 57
+ D W+ F P+RFL ++ I + K + FG G+R C
Sbjct: 390 VNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRC 434
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 15 TSRDESTWDHAHSFMPKRFLGSE 37
+RD +D A F+P+RF+G E
Sbjct: 396 ATRDPKIFDRADEFVPERFVGEE 418
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 15 TSRDESTWDHAHSFMPKRFLGSE 37
+RD +D A F+P+RF+G E
Sbjct: 396 ATRDPKIFDRADEFVPERFVGEE 418
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 26 HSFMPKRFLGSEVDFIGRNFKSIPFGAGRRIC 57
+F P+RFL GR F PFG G+R+C
Sbjct: 308 EAFRPERFLEERGTPSGRYF---PFGLGQRLC 336
>pdb|2OVL|A Chain A, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2)
pdb|2OVL|B Chain B, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2)
pdb|2OVL|C Chain C, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2)
pdb|2OVL|D Chain D, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2)
pdb|3CK5|A Chain A, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2) With Bound Magnesium
pdb|3CK5|B Chain B, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2) With Bound Magnesium
pdb|3CK5|C Chain C, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2) With Bound Magnesium
pdb|3CK5|D Chain D, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2) With Bound Magnesium
Length = 371
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 29 MPKRFLGSEVD-FIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLD 83
+P L ++ D F+ F++I GR PDL D+ + LR L +SF +D
Sbjct: 145 LPVADLKTQADRFLAGGFRAIKXKVGR---PDLKEDVDRVSALREHLGDSFPLXVD 197
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 26.2 bits (56), Expect = 4.3, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 14 ATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAG 53
++ D +TW F P+RF + D +F IP G G
Sbjct: 310 GSNHDAATWADPQEFRPERFRAWDED----SFNFIPQGGG 345
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 14 ATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAG 53
++ D +TW F P+RF + D +F IP G G
Sbjct: 310 GSNHDAATWADPQEFRPERFRAWDED----SFNFIPQGGG 345
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 14 ATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAG 53
++ D +TW F P+RF + D +F IP G G
Sbjct: 310 GSNHDAATWADPQEFRPERFRAWDED----SFNFIPQGGG 345
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 14 ATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAG 53
++ D +TW F P+RF + D +F IP G G
Sbjct: 318 GSNHDAATWADPQEFRPERFRAWDED----SFNFIPQGGG 353
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 14 ATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAG 53
++ D +TW F P+RF + D +F IP G G
Sbjct: 318 GSNHDAATWADPQEFRPERFRAWDED----SFNFIPQGGG 353
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 26.2 bits (56), Expect = 4.8, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 14 ATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAG 53
++ D +TW F P+RF + D +F IP G G
Sbjct: 318 GSNHDAATWADPQEFRPERFRAWDED----SFNFIPQGGG 353
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 26.2 bits (56), Expect = 5.2, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 22/68 (32%)
Query: 15 TSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSL 74
T D + F P+RF F +PFG G R C + L
Sbjct: 349 THADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRL 408
Query: 75 SNSFDWKL 82
FDW L
Sbjct: 409 IQQFDWTL 416
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 18 DESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNS 77
DE + + F P FL +F ++ +PF AG+R+C L L+ S+ +
Sbjct: 376 DEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGEGLARMELFLFLTSILQN 434
Query: 78 FDWK 81
F +
Sbjct: 435 FKLQ 438
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,149,483
Number of Sequences: 62578
Number of extensions: 164339
Number of successful extensions: 301
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 287
Number of HSP's gapped (non-prelim): 38
length of query: 122
length of database: 14,973,337
effective HSP length: 84
effective length of query: 38
effective length of database: 9,716,785
effective search space: 369237830
effective search space used: 369237830
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)