Query 038789
Match_columns 122
No_of_seqs 196 out of 1154
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 03:18:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038789.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038789hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158 Cytochrome P450 CYP3/C 99.9 1.9E-26 4.2E-31 177.1 7.5 104 7-114 394-499 (499)
2 PLN02394 trans-cinnamate 4-mon 99.9 4.7E-25 1E-29 170.0 9.6 102 10-114 396-502 (503)
3 PF00067 p450: Cytochrome P450 99.9 2.1E-24 4.6E-29 161.2 8.2 97 10-109 365-462 (463)
4 PLN02971 tryptophan N-hydroxyl 99.9 2.8E-24 6.1E-29 167.5 8.7 101 10-113 430-533 (543)
5 PTZ00404 cytochrome P450; Prov 99.9 4.2E-24 9.1E-29 164.0 8.7 96 9-113 386-482 (482)
6 KOG0156 Cytochrome P450 CYP2 s 99.9 3.7E-24 8.1E-29 165.0 8.2 100 8-113 387-487 (489)
7 PLN03234 cytochrome P450 83B1; 99.9 5.1E-24 1.1E-28 164.2 8.7 104 10-114 391-497 (499)
8 PLN02183 ferulate 5-hydroxylas 99.9 6.6E-24 1.4E-28 164.4 9.0 77 9-85 405-482 (516)
9 PLN02169 fatty acid (omega-1)- 99.9 8.9E-24 1.9E-28 163.4 8.8 99 9-113 397-499 (500)
10 PLN02966 cytochrome P450 83A1 99.9 1E-23 2.3E-28 162.8 8.0 104 10-114 394-498 (502)
11 PLN03018 homomethionine N-hydr 99.9 2.2E-23 4.9E-28 162.4 9.7 103 9-114 416-524 (534)
12 PLN00110 flavonoid 3',5'-hydro 99.9 2.4E-23 5.2E-28 161.1 8.7 102 9-114 391-497 (504)
13 PLN02500 cytochrome P450 90B1 99.9 3.1E-23 6.7E-28 159.7 8.8 77 9-85 385-467 (490)
14 PLN03195 fatty acid omega-hydr 99.9 2E-23 4.3E-28 161.6 7.7 77 9-85 414-491 (516)
15 PLN00168 Cytochrome P450; Prov 99.9 4.1E-23 8.9E-28 160.1 8.5 102 10-115 410-518 (519)
16 KOG0157 Cytochrome P450 CYP4/C 99.9 2.8E-23 6E-28 160.7 7.1 101 8-114 393-496 (497)
17 PLN02738 carotene beta-ring hy 99.9 1.3E-22 2.9E-27 160.7 10.0 101 10-115 492-596 (633)
18 PLN02687 flavonoid 3'-monooxyg 99.9 1.1E-22 2.4E-27 157.6 8.7 104 9-113 399-508 (517)
19 PLN02426 cytochrome P450, fami 99.9 1.2E-22 2.6E-27 157.3 8.6 102 9-114 396-500 (502)
20 PLN02774 brassinosteroid-6-oxi 99.9 1.3E-22 2.8E-27 155.4 8.5 73 10-85 369-441 (463)
21 PLN02655 ent-kaurene oxidase 99.9 1.5E-22 3.2E-27 155.2 8.6 100 9-114 363-464 (466)
22 PLN02290 cytokinin trans-hydro 99.9 2.1E-22 4.6E-27 155.8 8.4 97 9-114 416-515 (516)
23 PLN03112 cytochrome P450 famil 99.9 3.3E-22 7.2E-27 154.7 9.3 105 9-114 398-508 (514)
24 PLN03141 3-epi-6-deoxocathaste 99.9 2.3E-22 5.1E-27 153.5 7.8 73 9-85 356-428 (452)
25 PLN02936 epsilon-ring hydroxyl 99.9 3.9E-22 8.5E-27 153.7 8.6 100 10-115 380-483 (489)
26 PLN02302 ent-kaurenoic acid ox 99.9 1.4E-21 3.1E-26 149.9 9.1 73 9-85 392-464 (490)
27 PLN02196 abscisic acid 8'-hydr 99.9 1.6E-21 3.4E-26 149.5 7.6 71 10-85 369-439 (463)
28 PLN02987 Cytochrome P450, fami 99.8 3.9E-21 8.4E-26 147.9 9.0 97 9-114 371-469 (472)
29 KOG0159 Cytochrome P450 CYP11/ 99.8 3.5E-20 7.6E-25 141.6 6.4 97 11-114 420-518 (519)
30 KOG0684 Cytochrome P450 [Secon 99.8 2.6E-19 5.7E-24 134.9 6.3 72 14-85 384-459 (486)
31 PLN02648 allene oxide synthase 99.7 4.7E-18 1E-22 131.3 6.5 74 9-85 379-462 (480)
32 COG2124 CypX Cytochrome P450 [ 99.7 3.6E-18 7.8E-23 129.6 5.0 66 10-85 322-387 (411)
33 PF12444 Sox_N: Sox developmen 67.7 4.8 0.0001 24.2 1.9 22 64-85 59-80 (84)
34 PF09201 SRX: SRX; InterPro: 51.0 17 0.00038 24.0 2.4 22 55-76 18-39 (148)
35 PRK14759 potassium-transportin 49.4 7.1 0.00015 18.6 0.4 6 28-33 24-29 (29)
36 COG2101 SPT15 TATA-box binding 42.2 8.5 0.00018 26.4 0.0 35 27-61 36-70 (185)
37 cd04518 TBP_archaea archaeal T 37.7 8.2 0.00018 26.3 -0.6 35 26-60 29-63 (174)
38 PLN00062 TATA-box-binding prot 37.6 21 0.00045 24.5 1.4 55 26-80 29-85 (179)
39 cd04516 TBP_eukaryotes eukaryo 36.2 18 0.00039 24.6 0.9 34 26-59 29-62 (174)
40 cd00652 TBP_TLF TATA box bindi 33.3 32 0.0007 23.4 1.8 35 26-60 29-63 (174)
41 PF08492 SRP72: SRP72 RNA-bind 32.7 31 0.00068 19.2 1.3 7 29-35 44-50 (59)
42 KOG3302 TATA-box binding prote 32.3 25 0.00054 24.6 1.1 35 25-59 49-83 (200)
43 TIGR02115 potass_kdpF K+-trans 32.3 11 0.00023 17.5 -0.5 7 28-34 19-25 (26)
44 PRK00394 transcription factor; 31.7 13 0.00029 25.4 -0.3 34 26-59 28-61 (179)
45 KOG3506 40S ribosomal protein 25.0 34 0.00074 18.8 0.6 10 49-58 13-22 (56)
46 PF07886 BA14K: BA14K-like pro 23.8 85 0.0018 15.1 1.8 16 43-58 16-31 (31)
47 PF14510 ABC_trans_N: ABC-tran 22.7 26 0.00056 20.6 -0.2 19 17-35 23-41 (85)
No 1
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=1.9e-26 Score=177.09 Aligned_cols=104 Identities=19% Similarity=0.217 Sum_probs=84.0
Q ss_pred hhhhhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCC
Q 038789 7 NPEALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPY 86 (122)
Q Consensus 7 ~i~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~ 86 (122)
++.+++|++||||++||||++|+||||.+.+.+ ...+..|+|||.|+|.|+|.+||.+|+|++|+.||++|+++..+..
T Consensus 394 ~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t 472 (499)
T KOG0158|consen 394 PVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTT 472 (499)
T ss_pred EEEeecccccCCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcc
Confidence 355677899999999999999999999977654 4567799999999999999999999999999999999999988732
Q ss_pred CCCccCCCCCCCCccccccc-e-eeeccCC
Q 038789 87 GHGRKIRPSHTGGSTTSYCA-F-CHLVPYH 114 (122)
Q Consensus 87 ~~~~~~~~~~~~~~~~~p~~-~-~~~~pr~ 114 (122)
. .. ......+....|+. . +++++|.
T Consensus 473 ~--~~-~~~~~~~~~l~pk~gi~Lkl~~r~ 499 (499)
T KOG0158|consen 473 I--IP-LEGDPKGFTLSPKGGIWLKLEPRD 499 (499)
T ss_pred c--Cc-ccCCccceeeecCCceEEEEEeCC
Confidence 1 12 22233466677775 4 8887763
No 2
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.92 E-value=4.7e-25 Score=170.05 Aligned_cols=102 Identities=27% Similarity=0.421 Sum_probs=80.4
Q ss_pred hhhhhhcCCCCCCCCCCCcCCCCcCCCCCC--CcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCC
Q 038789 10 ALSKATSRDESTWDHAHSFMPKRFLGSEVD--FIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYG 87 (122)
Q Consensus 10 ~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~ 87 (122)
++.|++||||++|+||++|+||||++++.. .......++|||.|+|+|+|+++|.+|+++++|.++++|++++.++..
T Consensus 396 ~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~ 475 (503)
T PLN02394 396 VNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS 475 (503)
T ss_pred EchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC
Confidence 445599999999999999999999965432 122356799999999999999999999999999999999999876531
Q ss_pred CCccCCCCC-CC-Cccccccce-eeeccCC
Q 038789 88 HGRKIRPSH-TG-GSTTSYCAF-CHLVPYH 114 (122)
Q Consensus 88 ~~~~~~~~~-~~-~~~~~p~~~-~~~~pr~ 114 (122)
..+... .+ +....|.++ +++.||.
T Consensus 476 ---~~~~~~~~~~~~~~~~~~~~~~~~~r~ 502 (503)
T PLN02394 476 ---KIDVSEKGGQFSLHIAKHSTVVFKPRS 502 (503)
T ss_pred ---cCccccccCceeeccCCCceEEeecCC
Confidence 122322 22 344488888 9999984
No 3
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.91 E-value=2.1e-24 Score=161.17 Aligned_cols=97 Identities=24% Similarity=0.328 Sum_probs=73.7
Q ss_pred hhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCCCC
Q 038789 10 ALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGHG 89 (122)
Q Consensus 10 ~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~~~ 89 (122)
++++++|+||++|+||++|+||||++...........++|||.|+|.|+|+++|..+++++++.++++|+++++++..
T Consensus 365 ~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~-- 442 (463)
T PF00067_consen 365 VSIYALHRDPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSE-- 442 (463)
T ss_dssp EEHHHHTTSTTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSS--
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCC--
Confidence 445599999999999999999999987652234567899999999999999999999999999999999999987632
Q ss_pred ccCCCCCCCCccccccce-ee
Q 038789 90 RKIRPSHTGGSTTSYCAF-CH 109 (122)
Q Consensus 90 ~~~~~~~~~~~~~~p~~~-~~ 109 (122)
... .....++...|.++ +.
T Consensus 443 ~~~-~~~~~~~~~~~~~~~~~ 462 (463)
T PF00067_consen 443 PEP-QEQQNGFLLPPKPLKVK 462 (463)
T ss_dssp GGE-EECSCSSSEEESSSEEE
T ss_pred CCC-ccccCceEeeCCCcEEe
Confidence 111 11222566666665 54
No 4
>PLN02971 tryptophan N-hydroxylase
Probab=99.91 E-value=2.8e-24 Score=167.54 Aligned_cols=101 Identities=18% Similarity=0.272 Sum_probs=79.9
Q ss_pred hhhhhhcCCCCCCCCCCCcCCCCcCCCCCCC--cCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCC
Q 038789 10 ALSKATSRDESTWDHAHSFMPKRFLGSEVDF--IGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYG 87 (122)
Q Consensus 10 ~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~ 87 (122)
+++|++||||++|+||++|+||||+++..+. ...+..++|||.|+|.|+|+++|+.|+++++|.|+++|+|+++++..
T Consensus 430 ~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~ 509 (543)
T PLN02971 430 LSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSET 509 (543)
T ss_pred ECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCC
Confidence 4556999999999999999999999654321 22356799999999999999999999999999999999999876532
Q ss_pred CCccCCCCCCCCccccccce-eeeccC
Q 038789 88 HGRKIRPSHTGGSTTSYCAF-CHLVPY 113 (122)
Q Consensus 88 ~~~~~~~~~~~~~~~~p~~~-~~~~pr 113 (122)
.+......+....+.++ +.++||
T Consensus 510 ---~~~~~~~~~~~~~~~~~~~~~~~~ 533 (543)
T PLN02971 510 ---RVELMESSHDMFLSKPLVMVGELR 533 (543)
T ss_pred ---CcchhhhcCcccccccceeeeeec
Confidence 23333334533366777 888888
No 5
>PTZ00404 cytochrome P450; Provisional
Probab=99.90 E-value=4.2e-24 Score=164.04 Aligned_cols=96 Identities=24% Similarity=0.261 Sum_probs=76.6
Q ss_pred hhhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCCC
Q 038789 9 EALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGH 88 (122)
Q Consensus 9 ~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~~ 88 (122)
.+++|++||||++|+||++|+||||++.. ....++|||.|+|.|+|+++|++|++++++.++++|+++..++.
T Consensus 386 ~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-- 458 (482)
T PTZ00404 386 LINYYSLGRNEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGK-- 458 (482)
T ss_pred EeeHHHhhCCccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCC--
Confidence 34566999999999999999999998642 34579999999999999999999999999999999999886542
Q ss_pred CccCCCCCCCCccccccce-eeeccC
Q 038789 89 GRKIRPSHTGGSTTSYCAF-CHLVPY 113 (122)
Q Consensus 89 ~~~~~~~~~~~~~~~p~~~-~~~~pr 113 (122)
.+......+.+..|.++ +++++|
T Consensus 459 --~~~~~~~~~~~~~~~~~~v~~~~R 482 (482)
T PTZ00404 459 --KIDETEEYGLTLKPNKFKVLLEKR 482 (482)
T ss_pred --CCCcccccceeecCCCceeeeecC
Confidence 22222234555556666 777765
No 6
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.90 E-value=3.7e-24 Score=165.02 Aligned_cols=100 Identities=36% Similarity=0.564 Sum_probs=77.4
Q ss_pred hhhhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCC
Q 038789 8 PEALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYG 87 (122)
Q Consensus 8 i~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~ 87 (122)
+.+++|++||||++|+||++|+||||++.+ +.+.....++|||.|+|.|+|..+|.+++.+++|.++++|+|+++.+
T Consensus 387 v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-- 463 (489)
T KOG0156|consen 387 VLVNLWAIHRDPKVWEDPEEFKPERFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-- 463 (489)
T ss_pred EEEeehhhhcCCccCCCccccChhhhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC--
Confidence 345566999999999999999999999874 22235678999999999999999999999999999999999999876
Q ss_pred CCccCCCCCCCCccccccce-eeeccC
Q 038789 88 HGRKIRPSHTGGSTTSYCAF-CHLVPY 113 (122)
Q Consensus 88 ~~~~~~~~~~~~~~~~p~~~-~~~~pr 113 (122)
.++..........+.|+ +...||
T Consensus 464 ---~~d~~e~~~~~~~~~pl~~~~~~r 487 (489)
T KOG0156|consen 464 ---KVDMEEAGLTLKKKKPLKAVPVPR 487 (489)
T ss_pred ---CCCCcccccceecCCcceeeeecC
Confidence 22233332333444455 555554
No 7
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.90 E-value=5.1e-24 Score=164.19 Aligned_cols=104 Identities=32% Similarity=0.592 Sum_probs=82.0
Q ss_pred hhhhhhcCCCCCC-CCCCCcCCCCcCCCCCC--CcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCC
Q 038789 10 ALSKATSRDESTW-DHAHSFMPKRFLGSEVD--FIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPY 86 (122)
Q Consensus 10 ~~~~~~~~d~~~~-~dp~~F~P~Rfl~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~ 86 (122)
+++|++||||++| +||++|+||||+++... .+.....++|||.|+|.|+|+++|++|+++++|.++++|++++.++.
T Consensus 391 ~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~ 470 (499)
T PLN03234 391 VNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGI 470 (499)
T ss_pred EehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCC
Confidence 4556999999999 89999999999965432 23346689999999999999999999999999999999999988763
Q ss_pred CCCccCCCCCCCCccccccceeeeccCC
Q 038789 87 GHGRKIRPSHTGGSTTSYCAFCHLVPYH 114 (122)
Q Consensus 87 ~~~~~~~~~~~~~~~~~p~~~~~~~pr~ 114 (122)
. +..+......|+...+++.+.+.|+.
T Consensus 471 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (499)
T PLN03234 471 K-PEDIKMDVMTGLAMHKKEHLVLAPTK 497 (499)
T ss_pred C-CCCCCcccccccccccCCCeEEEeec
Confidence 2 23344455567766666666666654
No 8
>PLN02183 ferulate 5-hydroxylase
Probab=99.90 E-value=6.6e-24 Score=164.44 Aligned_cols=77 Identities=36% Similarity=0.695 Sum_probs=66.3
Q ss_pred hhhhhhhcCCCCCCCCCCCcCCCCcCCCCCC-CcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCC
Q 038789 9 EALSKATSRDESTWDHAHSFMPKRFLGSEVD-FIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLP 85 (122)
Q Consensus 9 ~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~ 85 (122)
.+++|++||||++|+||++|+||||++++.. .......++|||.|+|.|+|+++|.+|+++++|.++++|++++.++
T Consensus 405 ~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~ 482 (516)
T PLN02183 405 MINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDG 482 (516)
T ss_pred EEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCC
Confidence 3455699999999999999999999964432 1224567999999999999999999999999999999999998775
No 9
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.90 E-value=8.9e-24 Score=163.41 Aligned_cols=99 Identities=18% Similarity=0.271 Sum_probs=76.0
Q ss_pred hhhhhhhcCCCCCC-CCCCCcCCCCcCCCCCCCc-CCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCC
Q 038789 9 EALSKATSRDESTW-DHAHSFMPKRFLGSEVDFI-GRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPY 86 (122)
Q Consensus 9 ~~~~~~~~~d~~~~-~dp~~F~P~Rfl~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~ 86 (122)
.+++|++||||++| +||++|+||||+++++... ..+..|+|||+|+|.|+|+++|++|++++++.++++|+++++++.
T Consensus 397 ~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~ 476 (500)
T PLN02169 397 VICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH 476 (500)
T ss_pred EEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC
Confidence 45666999999999 8999999999996543321 235689999999999999999999999999999999999987542
Q ss_pred CCCccCCCCCCCCcccccc-ce-eeeccC
Q 038789 87 GHGRKIRPSHTGGSTTSYC-AF-CHLVPY 113 (122)
Q Consensus 87 ~~~~~~~~~~~~~~~~~p~-~~-~~~~pr 113 (122)
.+ ....+++..|+ ++ +++++|
T Consensus 477 ----~~--~~~~~~~l~~~~gl~l~l~~~ 499 (500)
T PLN02169 477 ----KI--EAIPSILLRMKHGLKVTVTKK 499 (500)
T ss_pred ----Cc--ccccceEEecCCCEEEEEEeC
Confidence 12 22233444444 44 666654
No 10
>PLN02966 cytochrome P450 83A1
Probab=99.90 E-value=1e-23 Score=162.78 Aligned_cols=104 Identities=36% Similarity=0.581 Sum_probs=78.4
Q ss_pred hhhhhhcCCCCCC-CCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCCC
Q 038789 10 ALSKATSRDESTW-DHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGH 88 (122)
Q Consensus 10 ~~~~~~~~d~~~~-~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~~ 88 (122)
+++|++||||++| +||++|+||||++.+.........++|||.|+|.|+|+++|.+|+++++|.++++|++++.++..
T Consensus 394 ~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~- 472 (502)
T PLN02966 394 VNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMK- 472 (502)
T ss_pred EecccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCC-
Confidence 4556999999999 99999999999965432223456799999999999999999999999999999999999887642
Q ss_pred CccCCCCCCCCccccccceeeeccCC
Q 038789 89 GRKIRPSHTGGSTTSYCAFCHLVPYH 114 (122)
Q Consensus 89 ~~~~~~~~~~~~~~~p~~~~~~~pr~ 114 (122)
...+......|....+.+.+++..++
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (502)
T PLN02966 473 PDDINMDVMTGLAMHKSQHLKLVPEK 498 (502)
T ss_pred cccCCcccccCeeeccCCCeEEEEEe
Confidence 22233334445544333345555544
No 11
>PLN03018 homomethionine N-hydroxylase
Probab=99.90 E-value=2.2e-23 Score=162.38 Aligned_cols=103 Identities=17% Similarity=0.367 Sum_probs=81.3
Q ss_pred hhhhhhhcCCCCCCCCCCCcCCCCcCCCCCCC-----cCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEec
Q 038789 9 EALSKATSRDESTWDHAHSFMPKRFLGSEVDF-----IGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLD 83 (122)
Q Consensus 9 ~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~ 83 (122)
.+++|++||||++|+||++|+||||++.++.. ...+..++|||.|+|.|+|+++|.++++++++.++++|++++.
T Consensus 416 ~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~ 495 (534)
T PLN03018 416 HVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLH 495 (534)
T ss_pred EEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeC
Confidence 34556999999999999999999999644321 1235679999999999999999999999999999999999987
Q ss_pred CCCCCCccCCCCCCCCccccccce-eeeccCC
Q 038789 84 LPYGHGRKIRPSHTGGSTTSYCAF-CHLVPYH 114 (122)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~p~~~-~~~~pr~ 114 (122)
++.. .+......+....|.++ ++++||.
T Consensus 496 ~~~~---~~~~~~~~~~~~~p~~~~v~~~~R~ 524 (534)
T PLN03018 496 QDFG---PLSLEEDDASLLMAKPLLLSVEPRL 524 (534)
T ss_pred CCCC---CCCccccccceecCCCeEEEEEecc
Confidence 6521 22232334566677888 9999993
No 12
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.89 E-value=2.4e-23 Score=161.07 Aligned_cols=102 Identities=32% Similarity=0.585 Sum_probs=78.2
Q ss_pred hhhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCc---CCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCC
Q 038789 9 EALSKATSRDESTWDHAHSFMPKRFLGSEVDFI---GRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLP 85 (122)
Q Consensus 9 ~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~ 85 (122)
.++.|++||||++|+||++|+||||+++..... .....++|||.|+|.|+|+++|..|+++++|.++++|++++.++
T Consensus 391 ~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~ 470 (504)
T PLN00110 391 SVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDG 470 (504)
T ss_pred EEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCC
Confidence 345569999999999999999999996432211 12347999999999999999999999999999999999998765
Q ss_pred CCCCccCCCCCCCCccccc-cce-eeeccCC
Q 038789 86 YGHGRKIRPSHTGGSTTSY-CAF-CHLVPYH 114 (122)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~p-~~~-~~~~pr~ 114 (122)
. ........+.+..| .++ +++++|.
T Consensus 471 ~----~~~~~~~~~~~~~~~~~~~~~~~~r~ 497 (504)
T PLN00110 471 V----ELNMDEAFGLALQKAVPLSAMVTPRL 497 (504)
T ss_pred C----ccCcccccccccccCCCceEeeccCC
Confidence 2 22222234455444 467 9998884
No 13
>PLN02500 cytochrome P450 90B1
Probab=99.89 E-value=3.1e-23 Score=159.70 Aligned_cols=77 Identities=23% Similarity=0.351 Sum_probs=66.0
Q ss_pred hhhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCc------CCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEe
Q 038789 9 EALSKATSRDESTWDHAHSFMPKRFLGSEVDFI------GRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKL 82 (122)
Q Consensus 9 ~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~ 82 (122)
.++.|++||||++|+||++|+||||++++.... ..+..++|||.|+|.|+|+++|.+|++++++.++++|+|++
T Consensus 385 ~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~ 464 (490)
T PLN02500 385 LPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWEL 464 (490)
T ss_pred EechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEE
Confidence 345569999999999999999999996532211 13567999999999999999999999999999999999998
Q ss_pred cCC
Q 038789 83 DLP 85 (122)
Q Consensus 83 ~~~ 85 (122)
.++
T Consensus 465 ~~~ 467 (490)
T PLN02500 465 AEA 467 (490)
T ss_pred cCC
Confidence 766
No 14
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.89 E-value=2e-23 Score=161.64 Aligned_cols=77 Identities=26% Similarity=0.317 Sum_probs=65.8
Q ss_pred hhhhhhhcCCCCCC-CCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCC
Q 038789 9 EALSKATSRDESTW-DHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLP 85 (122)
Q Consensus 9 ~~~~~~~~~d~~~~-~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~ 85 (122)
.++.|++||||++| +||++|+||||++++.........++|||.|+|.|+|+++|++|++++++.++++|++++.++
T Consensus 414 ~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~ 491 (516)
T PLN03195 414 TYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPG 491 (516)
T ss_pred EEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCC
Confidence 34667999999999 999999999999643211223457999999999999999999999999999999999998754
No 15
>PLN00168 Cytochrome P450; Provisional
Probab=99.89 E-value=4.1e-23 Score=160.09 Aligned_cols=102 Identities=26% Similarity=0.493 Sum_probs=77.1
Q ss_pred hhhhhhcCCCCCCCCCCCcCCCCcCCCCCC-----CcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecC
Q 038789 10 ALSKATSRDESTWDHAHSFMPKRFLGSEVD-----FIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDL 84 (122)
Q Consensus 10 ~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~ 84 (122)
+++|++||||++|+||++|+||||++.... .......++|||.|+|.|+|+++|.+|++++++.++++|+|++.+
T Consensus 410 ~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~ 489 (519)
T PLN00168 410 FMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVP 489 (519)
T ss_pred EChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCC
Confidence 445599999999999999999999964211 112245799999999999999999999999999999999999976
Q ss_pred CCCCCccCCCCCCCC-ccccccce-eeeccCCc
Q 038789 85 PYGHGRKIRPSHTGG-STTSYCAF-CHLVPYHN 115 (122)
Q Consensus 85 ~~~~~~~~~~~~~~~-~~~~p~~~-~~~~pr~~ 115 (122)
+.. .......+ ....+.++ +++++|..
T Consensus 490 ~~~----~~~~~~~~~~~~~~~~~~~~~~~R~~ 518 (519)
T PLN00168 490 GDE----VDFAEKREFTTVMAKPLRARLVPRRT 518 (519)
T ss_pred CCc----CChhhhceeEEeecCCcEEEEEeccC
Confidence 521 22222222 33344566 88888763
No 16
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.89 E-value=2.8e-23 Score=160.70 Aligned_cols=101 Identities=24% Similarity=0.257 Sum_probs=78.8
Q ss_pred hhhhhhhhcCCCCCCC-CCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCC
Q 038789 8 PEALSKATSRDESTWD-HAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPY 86 (122)
Q Consensus 8 i~~~~~~~~~d~~~~~-dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~ 86 (122)
+.+++|++|||+++|+ ||++|+||||+++......++++|+|||+|+|.|+|++||++|++++++.++++|+|+++.+.
T Consensus 393 V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~ 472 (497)
T KOG0157|consen 393 VLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGD 472 (497)
T ss_pred EEEehHHhccCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCC
Confidence 3445569999999996 999999999996544334557899999999999999999999999999999999999988773
Q ss_pred CCCccCCCCCCCCccccccc-e-eeeccCC
Q 038789 87 GHGRKIRPSHTGGSTTSYCA-F-CHLVPYH 114 (122)
Q Consensus 87 ~~~~~~~~~~~~~~~~~p~~-~-~~~~pr~ 114 (122)
. .......+..+.. + ++++||.
T Consensus 473 ~------~~~~~~~~l~~~~gl~v~~~~r~ 496 (497)
T KOG0157|consen 473 K------PKPVPELTLRPKNGLKVKLRPRG 496 (497)
T ss_pred C------ceeeeEEEEEecCCeEEEEEeCC
Confidence 1 2333334444442 3 7777764
No 17
>PLN02738 carotene beta-ring hydroxylase
Probab=99.88 E-value=1.3e-22 Score=160.67 Aligned_cols=101 Identities=22% Similarity=0.272 Sum_probs=76.8
Q ss_pred hhhhhhcCCCCCCCCCCCcCCCCcCCCCC--CCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCC
Q 038789 10 ALSKATSRDESTWDHAHSFMPKRFLGSEV--DFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYG 87 (122)
Q Consensus 10 ~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~ 87 (122)
++.|++||||++|+||++|+||||+.+.. ........++|||.|+|.|+|+++|++|+++++|.|+++|+|++.++..
T Consensus 492 ~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~ 571 (633)
T PLN02738 492 ISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP 571 (633)
T ss_pred ecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC
Confidence 45569999999999999999999984321 1123456799999999999999999999999999999999999986531
Q ss_pred CCccCCCCCCCCcccc-ccce-eeeccCCc
Q 038789 88 HGRKIRPSHTGGSTTS-YCAF-CHLVPYHN 115 (122)
Q Consensus 88 ~~~~~~~~~~~~~~~~-p~~~-~~~~pr~~ 115 (122)
. .....+.+.. +.++ +++++|..
T Consensus 572 ---~--~~~~~~~~~~p~~~l~v~l~~R~~ 596 (633)
T PLN02738 572 ---P--VKMTTGATIHTTEGLKMTVTRRTK 596 (633)
T ss_pred ---C--cccccceEEeeCCCcEEEEEECCC
Confidence 1 1222233333 3455 88888744
No 18
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.88 E-value=1.1e-22 Score=157.61 Aligned_cols=104 Identities=33% Similarity=0.538 Sum_probs=76.7
Q ss_pred hhhhhhhcCCCCCCCCCCCcCCCCcCCCCCC----CcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecC
Q 038789 9 EALSKATSRDESTWDHAHSFMPKRFLGSEVD----FIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDL 84 (122)
Q Consensus 9 ~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~----~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~ 84 (122)
.++.|++||||++|+||++|+||||++.... ....+..++|||.|+|.|+|+++|.+|+++++|.|+++|++++.+
T Consensus 399 ~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~ 478 (517)
T PLN02687 399 LVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELAD 478 (517)
T ss_pred EEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCC
Confidence 3455699999999999999999999964321 112345799999999999999999999999999999999999876
Q ss_pred CCCCCccCCCCCCCCcccccc-ce-eeeccC
Q 038789 85 PYGHGRKIRPSHTGGSTTSYC-AF-CHLVPY 113 (122)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~p~-~~-~~~~pr 113 (122)
+.. ...+......+....+. ++ ++++||
T Consensus 479 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~R 508 (517)
T PLN02687 479 GQT-PDKLNMEEAYGLTLQRAVPLMVHPRPR 508 (517)
T ss_pred CCC-cccCCcccccceeeecCCCeEEeeccC
Confidence 531 11222222333443333 44 777766
No 19
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.88 E-value=1.2e-22 Score=157.29 Aligned_cols=102 Identities=22% Similarity=0.286 Sum_probs=77.5
Q ss_pred hhhhhhhcCCCCCC-CCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCC
Q 038789 9 EALSKATSRDESTW-DHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYG 87 (122)
Q Consensus 9 ~~~~~~~~~d~~~~-~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~ 87 (122)
.++.|++||||++| +||++|+||||+++..........++|||.|+|.|+|+++|.+|++++++.++++|++++.++..
T Consensus 396 ~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~ 475 (502)
T PLN02426 396 TYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN 475 (502)
T ss_pred EEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC
Confidence 34566999999999 99999999999974321122345789999999999999999999999999999999999865421
Q ss_pred CCccCCCCCCCCcccccc-ce-eeeccCC
Q 038789 88 HGRKIRPSHTGGSTTSYC-AF-CHLVPYH 114 (122)
Q Consensus 88 ~~~~~~~~~~~~~~~~p~-~~-~~~~pr~ 114 (122)
. ......+.+..|+ .+ +++++|.
T Consensus 476 --~--~~~~~~~~~~~~~~gl~v~~~~r~ 500 (502)
T PLN02426 476 --R--APRFAPGLTATVRGGLPVRVRERV 500 (502)
T ss_pred --C--CCcccceeEEecCCCEEEEEEEcc
Confidence 1 1222334555555 45 8888774
No 20
>PLN02774 brassinosteroid-6-oxidase
Probab=99.88 E-value=1.3e-22 Score=155.37 Aligned_cols=73 Identities=19% Similarity=0.380 Sum_probs=64.0
Q ss_pred hhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCC
Q 038789 10 ALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLP 85 (122)
Q Consensus 10 ~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~ 85 (122)
+++|++||||++|+||++|+||||++.+.. ....++|||+|+|.|+|+++|.+|++++++.|+++|+|++.++
T Consensus 369 ~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~ 441 (463)
T PLN02774 369 VYTREINYDPFLYPDPMTFNPWRWLDKSLE---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGG 441 (463)
T ss_pred EehHHhcCCcccCCChhccCchhcCCCCcC---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCC
Confidence 455699999999999999999999964321 1235899999999999999999999999999999999999765
No 21
>PLN02655 ent-kaurene oxidase
Probab=99.88 E-value=1.5e-22 Score=155.20 Aligned_cols=100 Identities=25% Similarity=0.463 Sum_probs=77.7
Q ss_pred hhhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCCC
Q 038789 9 EALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGH 88 (122)
Q Consensus 9 ~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~~ 88 (122)
.++.|++|||+++|+||++|+||||+++... ......++|||.|+|.|+|+++|..+++++++.|+++|+|++.++..
T Consensus 363 ~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~- 440 (466)
T PLN02655 363 AINIYGCNMDKKRWENPEEWDPERFLGEKYE-SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE- 440 (466)
T ss_pred EecHHHhcCCcccCCChhccCccccCCCCcc-cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-
Confidence 3455699999999999999999999975432 12246799999999999999999999999999999999999976632
Q ss_pred CccCCCCCCCCccccc-cce-eeeccCC
Q 038789 89 GRKIRPSHTGGSTTSY-CAF-CHLVPYH 114 (122)
Q Consensus 89 ~~~~~~~~~~~~~~~p-~~~-~~~~pr~ 114 (122)
.. ....+++..+ .++ +++++|.
T Consensus 441 -~~---~~~~~~~~~~~~~~~~~~~~r~ 464 (466)
T PLN02655 441 -EK---EDTVQLTTQKLHPLHAHLKPRG 464 (466)
T ss_pred -cc---cchhheeEeecCCcEEEEeecC
Confidence 11 1223444434 466 8888775
No 22
>PLN02290 cytokinin trans-hydroxylase
Probab=99.87 E-value=2.1e-22 Score=155.80 Aligned_cols=97 Identities=23% Similarity=0.288 Sum_probs=75.1
Q ss_pred hhhhhhhcCCCCCC-CCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCC
Q 038789 9 EALSKATSRDESTW-DHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYG 87 (122)
Q Consensus 9 ~~~~~~~~~d~~~~-~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~ 87 (122)
.++.|++||||++| +||++|+||||++... .....++|||.|+|.|+|+++|++|++++++.++++|++++.++..
T Consensus 416 ~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~ 492 (516)
T PLN02290 416 WIPVLAIHHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR 492 (516)
T ss_pred EecHHHhcCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc
Confidence 34566999999999 8999999999995321 1234699999999999999999999999999999999999876521
Q ss_pred CCccCCCCCCCCccccccc-e-eeeccCC
Q 038789 88 HGRKIRPSHTGGSTTSYCA-F-CHLVPYH 114 (122)
Q Consensus 88 ~~~~~~~~~~~~~~~~p~~-~-~~~~pr~ 114 (122)
.....+.+..|.. . +++++|.
T Consensus 493 ------~~~~~~~~~~p~~~~~~~~~~~~ 515 (516)
T PLN02290 493 ------HAPVVVLTIKPKYGVQVCLKPLN 515 (516)
T ss_pred ------cCccceeeecCCCCCeEEEEeCC
Confidence 1112234555543 3 7777764
No 23
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.87 E-value=3.3e-22 Score=154.67 Aligned_cols=105 Identities=28% Similarity=0.464 Sum_probs=79.1
Q ss_pred hhhhhhhcCCCCCCCCCCCcCCCCcCCCCCC---C-cCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecC
Q 038789 9 EALSKATSRDESTWDHAHSFMPKRFLGSEVD---F-IGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDL 84 (122)
Q Consensus 9 ~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~---~-~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~ 84 (122)
.+++|++||||++|+||++|+||||+...+. . ......++|||.|+|.|+|+++|+++++++++.++++|++++.+
T Consensus 398 ~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~ 477 (514)
T PLN03112 398 FINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPD 477 (514)
T ss_pred EEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 3456699999999999999999998653211 1 12345799999999999999999999999999999999999875
Q ss_pred CCCCCccCCCCCCCCccc-cccce-eeeccCC
Q 038789 85 PYGHGRKIRPSHTGGSTT-SYCAF-CHLVPYH 114 (122)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~-~p~~~-~~~~pr~ 114 (122)
+.. ...+......++.. .+.++ +++.||-
T Consensus 478 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 508 (514)
T PLN03112 478 GLR-PEDIDTQEVYGMTMPKAKPLRAVATPRL 508 (514)
T ss_pred CCC-cccCCCccccCcccccCCCeEEEeecCC
Confidence 421 12233333345554 45577 9999984
No 24
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.87 E-value=2.3e-22 Score=153.50 Aligned_cols=73 Identities=27% Similarity=0.474 Sum_probs=64.7
Q ss_pred hhhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCC
Q 038789 9 EALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLP 85 (122)
Q Consensus 9 ~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~ 85 (122)
.+++|++|||+++|+||++|+||||++... ....++|||.|+|.|+|+++|.+|+++++|.|+++|+|++.++
T Consensus 356 ~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~ 428 (452)
T PLN03141 356 LAYFRSVHLDEENYDNPYQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEED 428 (452)
T ss_pred EEehHhccCCchhcCCccccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCC
Confidence 345569999999999999999999997532 2457999999999999999999999999999999999998655
No 25
>PLN02936 epsilon-ring hydroxylase
Probab=99.87 E-value=3.9e-22 Score=153.75 Aligned_cols=100 Identities=21% Similarity=0.266 Sum_probs=76.7
Q ss_pred hhhhhhcCCCCCCCCCCCcCCCCcCCCCCC--CcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCC
Q 038789 10 ALSKATSRDESTWDHAHSFMPKRFLGSEVD--FIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYG 87 (122)
Q Consensus 10 ~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~ 87 (122)
+++|++||||++|+||++|+||||+..... .......++|||.|+|.|+|+++|+++++++++.|+++|+++++++.
T Consensus 380 ~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~- 458 (489)
T PLN02936 380 ISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ- 458 (489)
T ss_pred ecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC-
Confidence 445699999999999999999999954321 12224579999999999999999999999999999999999988652
Q ss_pred CCccCCCCCCCCccc-cccce-eeeccCCc
Q 038789 88 HGRKIRPSHTGGSTT-SYCAF-CHLVPYHN 115 (122)
Q Consensus 88 ~~~~~~~~~~~~~~~-~p~~~-~~~~pr~~ 115 (122)
.+.. ..+... .+..+ +++++|..
T Consensus 459 ---~~~~--~~~~~~~~~~~~~v~~~~R~~ 483 (489)
T PLN02936 459 ---DIVM--TTGATIHTTNGLYMTVSRRRV 483 (489)
T ss_pred ---ccce--ecceEEeeCCCeEEEEEeeeC
Confidence 1111 123333 34456 99988764
No 26
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.86 E-value=1.4e-21 Score=149.94 Aligned_cols=73 Identities=19% Similarity=0.285 Sum_probs=64.9
Q ss_pred hhhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCC
Q 038789 9 EALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLP 85 (122)
Q Consensus 9 ~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~ 85 (122)
.++.+++|||+++|+||++|+||||++.. ..+..++|||.|+|.|+|+++|..|++++++.++++|++++.++
T Consensus 392 ~~~~~~~~rd~~~~~dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~ 464 (490)
T PLN02302 392 LAWFRQVHMDPEVYPNPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNP 464 (490)
T ss_pred EeeHHHhcCCcccCCCccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCC
Confidence 34566999999999999999999999643 23457999999999999999999999999999999999998765
No 27
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.85 E-value=1.6e-21 Score=149.46 Aligned_cols=71 Identities=21% Similarity=0.396 Sum_probs=63.8
Q ss_pred hhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCC
Q 038789 10 ALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLP 85 (122)
Q Consensus 10 ~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~ 85 (122)
++++++||||++|+||++|+||||++.. .+..++|||.|+|.|+|+++|+.+++++++.|+++|++++.++
T Consensus 369 ~~~~~~~rd~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~ 439 (463)
T PLN02196 369 PLFRNIHHSADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGT 439 (463)
T ss_pred eeHHHhcCCchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCC
Confidence 4456999999999999999999999632 3457999999999999999999999999999999999998765
No 28
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.85 E-value=3.9e-21 Score=147.92 Aligned_cols=97 Identities=23% Similarity=0.264 Sum_probs=75.6
Q ss_pred hhhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCCC
Q 038789 9 EALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGH 88 (122)
Q Consensus 9 ~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~~ 88 (122)
.++.+++||||++|+||++|+||||++.... ......++|||.|+|.|+|+++|..|++++++.|+++|++++.++.
T Consensus 371 ~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-- 447 (472)
T PLN02987 371 FASFRAVHLDHEYFKDARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD-- 447 (472)
T ss_pred EEehHHhhCCcccCCCccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC--
Confidence 3455699999999999999999999965322 1234579999999999999999999999999999999999987652
Q ss_pred CccCCCCCCCCcccccc-ce-eeeccCC
Q 038789 89 GRKIRPSHTGGSTTSYC-AF-CHLVPYH 114 (122)
Q Consensus 89 ~~~~~~~~~~~~~~~p~-~~-~~~~pr~ 114 (122)
.+.. +.+..|. ++ +++++|.
T Consensus 448 --~~~~----~~~~~p~~~~~~~~~~r~ 469 (472)
T PLN02987 448 --KLVF----FPTTRTQKRYPINVKRRD 469 (472)
T ss_pred --ceee----cccccCCCCceEEEEecc
Confidence 1111 2244454 45 8888774
No 29
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.81 E-value=3.5e-20 Score=141.64 Aligned_cols=97 Identities=19% Similarity=0.232 Sum_probs=77.0
Q ss_pred hhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCCCCc
Q 038789 11 LSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGHGR 90 (122)
Q Consensus 11 ~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~~~~ 90 (122)
+++.+.+||++|++|++|+|||||..+. .+.+++.++|||.|+|+|+|+++|.+|+.+.+|+++++|+++.....
T Consensus 420 ~~~~~~r~~~~F~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~---- 494 (519)
T KOG0159|consen 420 FLYVLGRNPAYFPDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE---- 494 (519)
T ss_pred eehhhccChhhCCCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC----
Confidence 3448899999999999999999998663 34578899999999999999999999999999999999999988752
Q ss_pred cCCCCCCCCcccccc-ce-eeeccCC
Q 038789 91 KIRPSHTGGSTTSYC-AF-CHLVPYH 114 (122)
Q Consensus 91 ~~~~~~~~~~~~~p~-~~-~~~~pr~ 114 (122)
+......+...|. +. .++.+|+
T Consensus 495 --pv~~~~~~il~P~~~l~f~f~~r~ 518 (519)
T KOG0159|consen 495 --PVEYVYRFILVPNRPLRFKFRPRN 518 (519)
T ss_pred --CccceeEEEEcCCCCcceeeeeCC
Confidence 2333334444444 34 6666654
No 30
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.78 E-value=2.6e-19 Score=134.87 Aligned_cols=72 Identities=26% Similarity=0.426 Sum_probs=63.9
Q ss_pred hhcCCCCCCCCCCCcCCCCcCCCCCCC----cCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCC
Q 038789 14 ATSRDESTWDHAHSFMPKRFLGSEVDF----IGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLP 85 (122)
Q Consensus 14 ~~~~d~~~~~dp~~F~P~Rfl~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~ 85 (122)
-+|+||++|+||+.|+|+||++++++. ..-.+.++|||+|++.|+|+.||.+|++.++..+++.|++++.++
T Consensus 384 ~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~ 459 (486)
T KOG0684|consen 384 LLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG 459 (486)
T ss_pred cccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC
Confidence 589999999999999999999776543 122345799999999999999999999999999999999999986
No 31
>PLN02648 allene oxide synthase
Probab=99.73 E-value=4.7e-18 Score=131.26 Aligned_cols=74 Identities=19% Similarity=0.396 Sum_probs=60.4
Q ss_pred hhhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceee---------cCCCCCCCCChHHHHHHHHHHHHHHhhcce
Q 038789 9 EALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIP---------FGAGRRICPDLPLDITMLYPLRGSLSNSFD 79 (122)
Q Consensus 9 ~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~---------Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~ 79 (122)
.++.+++||||++|+||++|+|+||+++... ....+++ ||+|+|.|+|+++|+.|++++++.|+++|+
T Consensus 379 ~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~ 455 (480)
T PLN02648 379 FGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYD 455 (480)
T ss_pred EEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhC
Confidence 3456699999999999999999999864321 1122333 367789999999999999999999999998
Q ss_pred -eEecCC
Q 038789 80 -WKLDLP 85 (122)
Q Consensus 80 -~~~~~~ 85 (122)
|++.++
T Consensus 456 ~~~l~~~ 462 (480)
T PLN02648 456 SFEIEVD 462 (480)
T ss_pred EEeecCC
Confidence 998776
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.73 E-value=3.6e-18 Score=129.59 Aligned_cols=66 Identities=26% Similarity=0.329 Sum_probs=60.6
Q ss_pred hhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCC
Q 038789 10 ALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLP 85 (122)
Q Consensus 10 ~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~ 85 (122)
+++++.||||++|++|++|+|+||. ..+++||+|+|.|+|.+||++|++++++.++++|++....+
T Consensus 322 ~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~ 387 (411)
T COG2124 322 LSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE 387 (411)
T ss_pred ecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC
Confidence 4556999999999999999999997 36899999999999999999999999999999999877655
No 33
>PF12444 Sox_N: Sox developmental protein N terminal ; InterPro: IPR022151 This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes.
Probab=67.67 E-value=4.8 Score=24.19 Aligned_cols=22 Identities=14% Similarity=0.238 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhhcceeEecCC
Q 038789 64 ITMLYPLRGSLSNSFDWKLDLP 85 (122)
Q Consensus 64 ~~~~~~~la~ll~~~~~~~~~~ 85 (122)
-..|+-++.++|+-|||.+++-
T Consensus 59 p~~IrdAVsqVLkGYDWtLVPm 80 (84)
T PF12444_consen 59 PVCIRDAVSQVLKGYDWTLVPM 80 (84)
T ss_pred cHHHHHHHHHHhccCCceeeec
Confidence 3578889999999999999864
No 34
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=50.97 E-value=17 Score=23.98 Aligned_cols=22 Identities=14% Similarity=0.116 Sum_probs=15.9
Q ss_pred CCCCChHHHHHHHHHHHHHHhh
Q 038789 55 RICPDLPLDITMLYPLRGSLSN 76 (122)
Q Consensus 55 r~C~G~~~a~~~~~~~la~ll~ 76 (122)
-.|.|++||...+-.++..++.
T Consensus 18 yN~~gKKFsE~QiN~FIs~lIt 39 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLIT 39 (148)
T ss_dssp EETTS----HHHHHHHHHHHHH
T ss_pred ecccchHHHHHHHHHHHHHHhc
Confidence 3599999999999999999985
No 35
>PRK14759 potassium-transporting ATPase subunit F; Provisional
Probab=49.42 E-value=7.1 Score=18.59 Aligned_cols=6 Identities=50% Similarity=1.154 Sum_probs=3.5
Q ss_pred cCCCCc
Q 038789 28 FMPKRF 33 (122)
Q Consensus 28 F~P~Rf 33 (122)
++||||
T Consensus 24 lrPErF 29 (29)
T PRK14759 24 LRPERF 29 (29)
T ss_pred hCcccC
Confidence 356665
No 36
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=42.20 E-value=8.5 Score=26.43 Aligned_cols=35 Identities=17% Similarity=0.418 Sum_probs=24.0
Q ss_pred CcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChH
Q 038789 27 SFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLP 61 (122)
Q Consensus 27 ~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~ 61 (122)
+|+|++|-.---....+....+-|..|+-.|.|.+
T Consensus 36 eYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK 70 (185)
T COG2101 36 EYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK 70 (185)
T ss_pred ccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence 78999985211112234457889999999999865
No 37
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=37.75 E-value=8.2 Score=26.34 Aligned_cols=35 Identities=17% Similarity=0.451 Sum_probs=24.2
Q ss_pred CCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCCh
Q 038789 26 HSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDL 60 (122)
Q Consensus 26 ~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~ 60 (122)
-+|+|+||-.---....+....+-|+.|+=.|.|.
T Consensus 29 ~eY~P~~fpgli~Rl~~Pk~t~lIF~SGKiv~tGa 63 (174)
T cd04518 29 AEYNPDQFPGLVYRLEDPKIAALIFRSGKMVCTGA 63 (174)
T ss_pred cEECCCcCcEEEEEccCCcEEEEEECCCeEEEEcc
Confidence 47999998532111223445788999999999975
No 38
>PLN00062 TATA-box-binding protein; Provisional
Probab=37.56 E-value=21 Score=24.49 Aligned_cols=55 Identities=13% Similarity=0.277 Sum_probs=31.4
Q ss_pred CCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChH-HHHH-HHHHHHHHHhhccee
Q 038789 26 HSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLP-LDIT-MLYPLRGSLSNSFDW 80 (122)
Q Consensus 26 ~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~-~a~~-~~~~~la~ll~~~~~ 80 (122)
-+|+|+||-.---....+....+-|+.|+=.|.|.. .... ....-++.++++..+
T Consensus 29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~~~~~~~L~~lg~ 85 (179)
T PLN00062 29 AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEHDSKLAARKYARIIQKLGF 85 (179)
T ss_pred CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEecCCHHHHHHHHHHHHHHHHHcCC
Confidence 589999985321112233457889999999999842 2222 122233455555444
No 39
>cd04516 TBP_eukaryotes eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=36.21 E-value=18 Score=24.65 Aligned_cols=34 Identities=21% Similarity=0.486 Sum_probs=23.2
Q ss_pred CCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCC
Q 038789 26 HSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPD 59 (122)
Q Consensus 26 ~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G 59 (122)
-+|+|++|-.---....+....+-|+.|+=.|.|
T Consensus 29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTG 62 (174)
T cd04516 29 AEYNPKRFAAVIMRIREPKTTALIFSSGKMVCTG 62 (174)
T ss_pred CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEe
Confidence 5899999853211122234567899999999988
No 40
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=33.30 E-value=32 Score=23.36 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=23.8
Q ss_pred CCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCCh
Q 038789 26 HSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDL 60 (122)
Q Consensus 26 ~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~ 60 (122)
-+|+|+||-.---....+....+-|+.|+=.|.|.
T Consensus 29 ~~YePe~fpgli~R~~~P~~t~lIf~sGKivitGa 63 (174)
T cd00652 29 AEYNPKRFPGVIMRLREPKTTALIFSSGKMVITGA 63 (174)
T ss_pred cEECCCccceEEEEcCCCcEEEEEECCCEEEEEec
Confidence 47899998532111223455788999999999983
No 41
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=32.66 E-value=31 Score=19.24 Aligned_cols=7 Identities=43% Similarity=0.785 Sum_probs=5.7
Q ss_pred CCCCcCC
Q 038789 29 MPKRFLG 35 (122)
Q Consensus 29 ~P~Rfl~ 35 (122)
||||||.
T Consensus 44 DPERWLP 50 (59)
T PF08492_consen 44 DPERWLP 50 (59)
T ss_pred CccccCc
Confidence 7899984
No 42
>KOG3302 consensus TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=32.33 E-value=25 Score=24.56 Aligned_cols=35 Identities=20% Similarity=0.470 Sum_probs=22.9
Q ss_pred CCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCC
Q 038789 25 AHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPD 59 (122)
Q Consensus 25 p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G 59 (122)
--+|+|.||-.---....+.....-|+.|+=.|.|
T Consensus 49 N~ey~Pk~~~aVimrir~P~~ta~I~ssGKi~ctg 83 (200)
T KOG3302|consen 49 NAEYNPKRFAAVIMRIRSPRTTALIFSSGKIVCTG 83 (200)
T ss_pred ccccCcccccEEEEEEcCCceEEEEecCCcEEEec
Confidence 34799999863211122234456789999999986
No 43
>TIGR02115 potass_kdpF K+-transporting ATPase, KdpF subunit. This model describes a very small integral membrane peptide KdpF, a subunit of the K(+)-translocating Kdp complex. It is found upstream of the KdpA subunit (TIGR00680). Because of its very small size and highly hydrophobic character, it is sometimes missed in genome annotation.
Probab=32.28 E-value=11 Score=17.53 Aligned_cols=7 Identities=43% Similarity=0.971 Sum_probs=4.0
Q ss_pred cCCCCcC
Q 038789 28 FMPKRFL 34 (122)
Q Consensus 28 F~P~Rfl 34 (122)
++||||.
T Consensus 19 l~PErF~ 25 (26)
T TIGR02115 19 LRPERFX 25 (26)
T ss_pred hCHHhcC
Confidence 3566663
No 44
>PRK00394 transcription factor; Reviewed
Probab=31.72 E-value=13 Score=25.41 Aligned_cols=34 Identities=18% Similarity=0.480 Sum_probs=23.8
Q ss_pred CCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCC
Q 038789 26 HSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPD 59 (122)
Q Consensus 26 ~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G 59 (122)
-+|+|+||-.---....+....+-|..|+=.|.|
T Consensus 28 ~eYePe~fpgli~Rl~~Pk~t~lIf~sGKiv~tG 61 (179)
T PRK00394 28 AEYNPEQFPGLVYRLEDPKIAALIFRSGKVVCTG 61 (179)
T ss_pred ceeCcccCceEEEEecCCceEEEEEcCCcEEEEc
Confidence 4899999853221222345578899999999988
No 45
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=24.98 E-value=34 Score=18.82 Aligned_cols=10 Identities=50% Similarity=1.089 Sum_probs=8.6
Q ss_pred ecCCCCCCCC
Q 038789 49 PFGAGRRICP 58 (122)
Q Consensus 49 ~Fg~G~r~C~ 58 (122)
+||-|.|.|-
T Consensus 13 kfg~GsrsC~ 22 (56)
T KOG3506|consen 13 KFGQGSRSCR 22 (56)
T ss_pred ccCCCCccee
Confidence 6999999875
No 46
>PF07886 BA14K: BA14K-like protein; InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process [].
Probab=23.83 E-value=85 Score=15.07 Aligned_cols=16 Identities=31% Similarity=0.684 Sum_probs=12.5
Q ss_pred CCcceeecCCCCCCCC
Q 038789 43 RNFKSIPFGAGRRICP 58 (122)
Q Consensus 43 ~~~~~~~Fg~G~r~C~ 58 (122)
....++++.+..|.|.
T Consensus 16 ~~~Ty~~~~G~r~~C~ 31 (31)
T PF07886_consen 16 RDNTYQPYDGPRRFCR 31 (31)
T ss_pred CCCcEeCCCCccccCc
Confidence 3557999998888884
No 47
>PF14510 ABC_trans_N: ABC-transporter extracellular N-terminal
Probab=22.66 E-value=26 Score=20.62 Aligned_cols=19 Identities=26% Similarity=0.314 Sum_probs=15.5
Q ss_pred CCCCCCCCCCCcCCCCcCC
Q 038789 17 RDESTWDHAHSFMPKRFLG 35 (122)
Q Consensus 17 ~d~~~~~dp~~F~P~Rfl~ 35 (122)
.|+.+-|+.+.|+.++|+.
T Consensus 23 ~d~~ldp~s~~Fdl~~~lr 41 (85)
T PF14510_consen 23 SDSSLDPDSDDFDLRRWLR 41 (85)
T ss_pred CCCCCCCCCccccHHHHHH
Confidence 4667778888899999984
Done!