BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 038790
         (139 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q0V9R0|RN111_XENTR E3 ubiquitin-protein ligase arkadia OS=Xenopus tropicalis GN=rnf111
           PE=2 SV=1
          Length = 954

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 2/51 (3%)

Query: 58  ECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCRDFLDSR 108
           +C +CL  +EEGE++R L C H+FH+VC+DQW  L     CP+CR  +D++
Sbjct: 901 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQW--LITNKKCPICRVDIDTQ 949


>sp|Q66J97|R111C_XENLA E3 ubiquitin-protein ligase arkadia-C OS=Xenopus laevis GN=rnf111-c
           PE=2 SV=1
          Length = 967

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 2/51 (3%)

Query: 58  ECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCRDFLDSR 108
           +C +CL  +EEGE++R L C H+FH+VC+DQW  L     CP+CR  +D++
Sbjct: 914 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQW--LITNKKCPICRVDIDTQ 962


>sp|Q6NRV8|R111B_XENLA E3 ubiquitin-protein ligase arkadia-B OS=Xenopus laevis GN=rnf111-b
           PE=2 SV=1
          Length = 959

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 2/51 (3%)

Query: 58  ECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCRDFLDSR 108
           +C +CL  +EEGE++R L C H+FH+VC+DQW  L     CP+CR  +D++
Sbjct: 906 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQW--LITNKKCPICRVDIDTQ 954


>sp|Q90ZT7|R111A_XENLA E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis
           GN=rnf111-a PE=2 SV=1
          Length = 923

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 2/51 (3%)

Query: 58  ECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCRDFLDSR 108
           +C +CL  +EEGE++R L C H+FH+VC+DQW  L     CP+CR  +D++
Sbjct: 870 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQW--LITNKKCPICRVDIDTQ 918


>sp|Q5R476|RN111_PONAB E3 ubiquitin-protein ligase Arkadia OS=Pongo abelii GN=RNF111 PE=2
           SV=1
          Length = 986

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 2/45 (4%)

Query: 58  ECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           +C +CL  +EEGE++R L C H+FH+VC+DQW  L     CP+CR
Sbjct: 933 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQW--LITNKKCPICR 975


>sp|Q99ML9|RN111_MOUSE E3 ubiquitin-protein ligase Arkadia OS=Mus musculus GN=Rnf111 PE=1
           SV=1
          Length = 989

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 2/45 (4%)

Query: 58  ECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           +C +CL  +EEGE++R L C H+FH+VC+DQW  L     CP+CR
Sbjct: 936 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQW--LITNKKCPICR 978


>sp|Q6ZNA4|RN111_HUMAN E3 ubiquitin-protein ligase Arkadia OS=Homo sapiens GN=RNF111 PE=1
           SV=3
          Length = 994

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 2/45 (4%)

Query: 58  ECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           +C +CL  +EEGE++R L C H+FH+VC+DQW  L     CP+CR
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQW--LITNKKCPICR 983


>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
           SV=2
          Length = 400

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 8/107 (7%)

Query: 2   LSYIVSVSTHLKWACKFLIQNSLF-GHRIGMHGVPAE----IGEELL-TVGRYERNNDNE 55
           +++I  +   L W   + IQ  L+ G +IG      E    IG+ LL TV   E+  D +
Sbjct: 206 IAFITMMIISLAWLIFYYIQRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVD 265

Query: 56  AVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           A  CAVC+   +  + IR L C HIFHR+C+D W  L    TCP+C+
Sbjct: 266 AENCAVCIENFKVKDIIRILPCKHIFHRICIDPW--LLDHRTCPMCK 310


>sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana
           GN=At4g11680 PE=2 SV=1
          Length = 390

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 2/77 (2%)

Query: 26  GHRIGMHGVPAEIGEELLTVGRYERNNDNEAVECAVCLCEIEEGEEIRELRCDHIFHRVC 85
           G+   + G    I  E  T    ER+   E  EC +CLCE E+G E+REL C+H FH  C
Sbjct: 305 GNVEKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTC 364

Query: 86  LDQWVGLFRRVTCPLCR 102
           +D+W+ +  R  CPLC+
Sbjct: 365 IDKWLHINSR--CPLCK 379


>sp|Q9ZU51|RHA2B_ARATH Probable E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana
           GN=RHA2B PE=1 SV=2
          Length = 147

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 50  RNNDNEAVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCRDFL 105
           R +DN A +C VCL +++ GEE+R+L C H+FH+ CL+ W+       CPLCR  L
Sbjct: 65  RYSDNAASDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHL-NFNCPLCRSPL 119


>sp|Q9SUS4|RHA1A_ARATH RING-H2 zinc finger protein RHA1a OS=Arabidopsis thaliana GN=RHA1A
           PE=2 SV=1
          Length = 159

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)

Query: 17  KFLIQNSLFGHRIGMHGVP--AEIGEELLTVGRYERNNDNEAVECAVCLCEIEEGEEIRE 74
           +FL  N      +  H +   A +  EL+ V R+     +    C VCL + E  +++R+
Sbjct: 42  RFLDHNETSAPDLTRHALSTSASLANELIPVVRFSDLPTDPEDCCTVCLSDFESDDKVRQ 101

Query: 75  L-RCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           L +C H+FH  CLD+W+  + ++ CP+CR
Sbjct: 102 LPKCGHVFHHYCLDRWIVDYNKMKCPVCR 130


>sp|Q5NCP0|RNF43_MOUSE E3 ubiquitin-protein ligase RNF43 OS=Mus musculus GN=Rnf43 PE=2
           SV=1
          Length = 784

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 2/43 (4%)

Query: 59  CAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLC 101
           CA+CL E  EG+E+R + C H FHR C+D W  L++  TCPLC
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPW--LYQHRTCPLC 312


>sp|Q9ZT50|RHA2A_ARATH E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana GN=RHA2A
           PE=1 SV=1
          Length = 155

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 1/50 (2%)

Query: 58  ECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCRDFLDS 107
           +C VCL +++EGEE+R+L C H+FH+ CL+ W+  F   TCPLCR  L S
Sbjct: 85  DCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQF-NFTCPLCRSALVS 133


>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
           GN=EL5.1 PE=1 SV=1
          Length = 325

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 3/47 (6%)

Query: 57  VECAVCLCEIEEGEEIREL-RCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           VECAVCL E+E+GEE R L RC H FH  C+D W+G     TCPLCR
Sbjct: 132 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLG--SHSTCPLCR 176


>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
           SV=3
          Length = 394

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 8/107 (7%)

Query: 2   LSYIVSVSTHLKWAC-----KFLIQNSLFGHRIGMHGVPAEIGE-ELLTVGRYERNNDNE 55
           +++I  +   L W       +FL   S FG +         IG+  L TV   E+  D +
Sbjct: 202 IAFITMMIISLAWLIFYYIQRFLYTGSQFGSQNHRKETKKVIGQLPLHTVKHGEKGIDVD 261

Query: 56  AVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           A  CAVC+   +  + IR L C HIFHR+C+D W  L    TCP+C+
Sbjct: 262 AENCAVCIENFKVKDVIRILPCKHIFHRICIDPW--LLDHRTCPMCK 306


>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
           SV=1
          Length = 156

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 2/54 (3%)

Query: 54  NEAVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCRDFLDS 107
           + A++C VCL E EEGE +R+L C+H+FH  C+  W+G  +  +CPLCR  L +
Sbjct: 74  DAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLG--KTNSCPLCRHELPT 125


>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
           PE=2 SV=1
          Length = 156

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 2/54 (3%)

Query: 54  NEAVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCRDFLDS 107
           + A++C VCL E EEGE +R+L C+H+FH  C+  W+G  +  +CPLCR  L +
Sbjct: 74  DAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLG--KTNSCPLCRHELPT 125


>sp|E9QAU8|RN165_MOUSE RING finger protein 165 OS=Mus musculus GN=Rnf165 PE=2 SV=1
          Length = 347

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 41/58 (70%), Gaps = 3/58 (5%)

Query: 46  GRYERNNDNEAVE-CAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           G+ +   +++  E C +CL  +E+GE++R L C H+FH++C+DQW+ + ++  CP+CR
Sbjct: 281 GKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKK--CPICR 336


>sp|Q6ZSG1|RN165_HUMAN RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1
          Length = 346

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 41/58 (70%), Gaps = 3/58 (5%)

Query: 46  GRYERNNDNEAVE-CAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           G+ +   +++  E C +CL  +E+GE++R L C H+FH++C+DQW+ + ++  CP+CR
Sbjct: 280 GKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKK--CPICR 335


>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
          Length = 515

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)

Query: 41  ELLTVGRYERNN-DNEAVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCP 99
           E L   R+  NN  +E   C VC+C+ E  + +R L C+H FH  C+D+W+   R  TCP
Sbjct: 444 EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANR--TCP 501

Query: 100 LCR 102
           +CR
Sbjct: 502 ICR 504


>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
           SV=1
          Length = 783

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 29/43 (67%), Gaps = 2/43 (4%)

Query: 59  CAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLC 101
           CA+CL E  EG+E+R + C H FHR C+D W+   R  TCPLC
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHR--TCPLC 312


>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
          Length = 518

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 2/52 (3%)

Query: 51  NNDNEAVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           N+ +E   C VC+C+ E  + +R L C+H FH  C+D+W+   R  TCP+CR
Sbjct: 458 NHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNR--TCPICR 507


>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
           GN=ATL37 PE=3 SV=1
          Length = 357

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 3/53 (5%)

Query: 54  NEAVECAVCLCEIEEGEEIREL-RCDHIFHRVCLDQWVGLFRRVTCPLCRDFL 105
           N  VECA+CLCE E+ E +R +  C H FH  C+D+W  L  R TCP+CR  L
Sbjct: 115 NGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEW--LSSRSTCPVCRANL 165


>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
           SV=1
          Length = 397

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 2   LSYIVSVSTHLKWACKFLIQNSLF-GHRIGMHGVPAEIGE-----ELLTVGRYERNNDNE 55
           +++I  +   L W   + IQ  L+ G + G      E  +     +L  V + E+  D +
Sbjct: 201 IAFITMMIISLAWLIFYYIQRFLYTGAQCGNQSNRKETKKAISQLQLHRVKKGEKGIDID 260

Query: 56  AVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           A  CAVC+   +  + +R L C HIFHR+C+D W  L    TCP+C+
Sbjct: 261 AENCAVCIENYKTKDLVRILPCKHIFHRLCIDPW--LIEHRTCPMCK 305


>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
          Length = 600

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 9/64 (14%)

Query: 53  DNEAVE-CAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCRDFLDSRRAV 111
           +N+A++ C+VC+ E  EG ++R+L C H +H  C+D+W  L    TCP+C      RRAV
Sbjct: 539 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRW--LSENSTCPIC------RRAV 590

Query: 112 VENG 115
           + +G
Sbjct: 591 LSSG 594


>sp|Q9ZT49|ATL45_ARATH RING-H2 finger protein ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2
           SV=1
          Length = 200

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 3/56 (5%)

Query: 51  NNDNEAVECAVCLCEIEEGEEIRELR-CDHIFHRVCLDQWVGLFRRVTCPLCRDFL 105
            + + + ECA+C+ E  EGEEIR L  C H FH  C+D+W  L  R +CP CR  L
Sbjct: 105 GDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKW--LTSRSSCPSCRRIL 158


>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
           SV=2
          Length = 356

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 3/58 (5%)

Query: 55  EAVECAVCLCEIEEGEEIREL-RCDHIFHRVCLDQWVGLFRRVTCPLCRDFLDSRRAV 111
           E+ +C+VCL E +E E +R L +C+H FH  C+D W  L     CPLCR F+ +  AV
Sbjct: 155 ESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTW--LKSHSNCPLCRAFIVTSSAV 210


>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
          Length = 624

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 9/64 (14%)

Query: 53  DNEAVE-CAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCRDFLDSRRAV 111
           +N+A++ C+VC+ E  EG ++R+L C H +H  C+D+W  L    TCP+C      RRAV
Sbjct: 563 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRW--LSENSTCPIC------RRAV 614

Query: 112 VENG 115
           + +G
Sbjct: 615 LASG 618


>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
           SV=1
          Length = 347

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 40  EELLTVGRYERNNDNEAVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCP 99
           E+L  +  ++    +E   CA+CL E E+G+++R L C H +H  C+D W+   R+ TCP
Sbjct: 211 EQLKQIPTHDYQKGDEYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRK-TCP 269

Query: 100 LCR 102
           +C+
Sbjct: 270 ICK 272


>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
           GN=ATL49 PE=3 SV=1
          Length = 423

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 58  ECAVCLCEIEEGEEIREL-RCDHIFHRVCLDQWVGLFRRVTCPLCRDFLDS 107
           +C VCLCE E  +++R L +C H FH  C+D W  L    TCPLCR  L S
Sbjct: 125 DCPVCLCEFETEDKLRLLPKCSHAFHVECIDTW--LLSHSTCPLCRSNLLS 173


>sp|Q9SUS5|RHA1B_ARATH E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana GN=RHA1B
           PE=2 SV=1
          Length = 157

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)

Query: 36  AEIGEELLTVGRYERNNDNEAVECAVCLCEIEEGEEIREL-RCDHIFHRVCLDQWVGLFR 94
           A +  EL+ V R+     +    C VCL +    ++IR+L +C H+FH  CLD+W+    
Sbjct: 62  ATLANELIPVVRFSDLLTDPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCN 121

Query: 95  RVTCPLCRD-FLDSRRAV 111
           ++TCP+CR+ FL   ++ 
Sbjct: 122 KITCPICRNRFLPEEKST 139


>sp|Q4R6Y5|ZNRF4_MACFA Zinc/RING finger protein 4 OS=Macaca fascicularis GN=ZNRF4 PE=2
           SV=1
          Length = 429

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 4/58 (6%)

Query: 45  VGRYERNNDNEAVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           V  + R ND     CA+CL E EEG++++ L C H +H  C+D W     R +CP+C+
Sbjct: 299 VRTFTRRND----LCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCK 352


>sp|Q9LN71|RING1_ARATH E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana
           GN=At1g12760 PE=2 SV=1
          Length = 408

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 32  HGVPAEIGEELLTVGRYERNNDNEAVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVG 91
            G    I  E  T    E     E  EC +CL   E+G E+REL C H FH  C+D+W  
Sbjct: 326 QGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKW-- 383

Query: 92  LFRRVTCPLCR 102
           L+   TCPLC+
Sbjct: 384 LYINATCPLCK 394


>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
           SV=1
          Length = 913

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)

Query: 58  ECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           +CA+CL +  +GEE+R + C H FHR C+D W  L +  TCP CR
Sbjct: 289 DCAICLEKYIDGEELRVIPCTHRFHRKCVDPW--LLQHHTCPHCR 331


>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
           PE=2 SV=1
          Length = 639

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 53  DNEAVE-CAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           +N+A++ C+VC+ E  EG ++R+L C H +H  C+D+W  L    TCP+CR
Sbjct: 578 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRW--LSENSTCPICR 626


>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
           PE=2 SV=1
          Length = 349

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 40  EELLTVGRYERNNDNEAVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCP 99
           E+L  +  ++    +E   CA+CL E E+G+++R L C H +H  C+D W+   R+ TCP
Sbjct: 211 EQLKQIPTHDYQKGDEYDVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRK-TCP 269

Query: 100 LCRD 103
           +C+ 
Sbjct: 270 ICKQ 273


>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
          Length = 438

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 9/108 (8%)

Query: 2   LSYIVSVSTHLKWACKFLIQNSLFGH-------RIGMHGVPAEIGEELLTVGRYERNNDN 54
           +S+IV +   L W   + IQ   + +       R+G     A    ++ T+ + ++  ++
Sbjct: 214 ISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQIRTIKKGDKETES 273

Query: 55  EAVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           +   CAVC+   +  + +R L C H+FH+ C+D W  L    TCP+C+
Sbjct: 274 DFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPW--LLDHRTCPMCK 319


>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
           SV=1
          Length = 237

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)

Query: 43  LTVGRYERNNDNEAVECAVCLCEIEEGEEIREL-RCDHIFHRVCLDQWVGLFRRVTCPLC 101
           L V RY +       +C +CL + EEGE ++ +  C H+FH  C+D W+  +  VTCPLC
Sbjct: 124 LPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSY--VTCPLC 181

Query: 102 R 102
           R
Sbjct: 182 R 182


>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
           PE=1 SV=1
          Length = 419

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)

Query: 44  TVGRYERNNDNEAVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           TV + ++  D +   CAVC+   ++ + +R L C H+FH+ C+D W  L    TCP+C+
Sbjct: 249 TVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPW--LSEHCTCPMCK 305


>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
           SV=1
          Length = 419

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)

Query: 44  TVGRYERNNDNEAVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           TV + ++  D +   CAVC+   ++ + +R L C H+FH+ C+D W  L    TCP+C+
Sbjct: 249 TVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPW--LSEHCTCPMCK 305


>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
           PE=2 SV=1
          Length = 757

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 53  DNEAVE-CAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           +N+A++ C+VC+ E  EG ++R+L C H +H  C+D+W  L    TCP+CR
Sbjct: 696 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRW--LSENSTCPICR 744


>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
           PE=1 SV=1
          Length = 622

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 53  DNEAVE-CAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           +N+A++ C+VC+ E  EG ++R+L C H +H  C+D+W  L    TCP+CR
Sbjct: 561 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRW--LSENSTCPICR 609


>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
           PE=1 SV=2
          Length = 398

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 3/50 (6%)

Query: 57  VECAVCLCEIEEGEEIREL-RCDHIFHRVCLDQWVGLFRRVTCPLCRDFL 105
           +ECA+CL E E+ E +R L +CDH+FH  C+D W  L   VTCP+CR  L
Sbjct: 126 LECAICLNEFEDDETLRLLPKCDHVFHPHCIDAW--LEAHVTCPVCRANL 173


>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
           SV=1
          Length = 376

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 55  EAVECAVCLCEIEEGEEIRELR-CDHIFHRVCLDQWVGLFRRVTCPLCRDFLDSRRAVVE 113
           E  +CAVCLCE  E +++R L  C H FH  C+D W  L    TCPLCR  L S    +E
Sbjct: 139 EPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTW--LQSNSTCPLCRGTLFSPGFSME 196

Query: 114 NGI 116
           N +
Sbjct: 197 NPM 199


>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
           SV=2
          Length = 304

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 43  LTVGRYERNNDNEAVECAVCLCEIEEGEEIREL-RCDHIFHRVCLDQWVGLFRRVTCPLC 101
           L V  +      + +ECAVCL E EE E  R L  C H FH  C+D W       TCPLC
Sbjct: 103 LPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMW--FHSHSTCPLC 160

Query: 102 RDFLDS 107
           R  ++S
Sbjct: 161 RSLVES 166


>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
           GN=At3g19950 PE=2 SV=1
          Length = 328

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)

Query: 27  HRIGMHGVPAEIGEELLTVGRYERNNDNEAVECAVCLCEIEEGEEIRELRCDHIFHRVCL 86
           +R G         + L TV   +    +E  +CAVC+ E E+G +++++ C H+FH+ CL
Sbjct: 184 NRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCL 243

Query: 87  DQWVGLFRRVTCPLCRDFLDSRRAVVEN 114
             W+ L    +CP+CR  L +     EN
Sbjct: 244 LPWLELHN--SCPVCRFELPTDDPDYEN 269


>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
           SV=1
          Length = 181

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 3/54 (5%)

Query: 53  DNEAVECAVCLCEIEEGEEIREL-RCDHIFHRVCLDQWVGLFRRVTCPLCRDFL 105
           D +A EC +CL + E+GE++R L +C+H FH  C+D W  L  R +CP CR  L
Sbjct: 108 DMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTW--LLSRSSCPTCRQSL 159


>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
           SV=1
          Length = 419

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 9/108 (8%)

Query: 2   LSYIVSVSTHLKWACKFLIQNSLFGH-------RIGMHGVPAEIGEELLTVGRYERNNDN 54
           +S+IV +     W   + IQ   + +       R+G     A       TV + ++  D 
Sbjct: 200 ISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDP 259

Query: 55  EAVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           +   CAVC+   ++ + +R L C H+FH+ C+D W  L    TCP+C+
Sbjct: 260 DFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPW--LSEHCTCPMCK 305


>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
           SV=3
          Length = 936

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 2/44 (4%)

Query: 59  CAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCPLCR 102
           CA+CL +  +GEE+R + C H FHR C+D W  L +  TCP CR
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPW--LLQHHTCPHCR 334


>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
           SV=1
          Length = 350

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 40  EELLTVGRYERNNDNEAVECAVCLCEIEEGEEIRELRCDHIFHRVCLDQWVGLFRRVTCP 99
           E+L  +  ++    ++   CA+CL E E+G+++R L C H +H  C+D W+   R+ TCP
Sbjct: 211 EQLKQIPTHDYQKGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRK-TCP 269

Query: 100 LCR 102
           +C+
Sbjct: 270 ICK 272


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.328    0.142    0.472 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,505,970
Number of Sequences: 539616
Number of extensions: 2093429
Number of successful extensions: 6223
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 285
Number of HSP's that attempted gapping in prelim test: 5826
Number of HSP's gapped (non-prelim): 524
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)