Query 038792
Match_columns 148
No_of_seqs 156 out of 1034
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 04:55:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038792.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038792hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rkn_A DIR1 protein, AT5G48485 99.6 3.5E-16 1.2E-20 105.7 0.6 68 30-103 3-75 (77)
2 2ljo_A Non-specific lipid-tran 99.5 2E-16 6.8E-21 110.9 -1.4 71 30-103 2-80 (93)
3 1n89_A Lipid transfer protein; 99.5 3.3E-16 1.1E-20 103.5 -1.0 63 32-102 2-65 (67)
4 1l6h_A LTP2, non-specific lipi 99.5 4E-16 1.4E-20 103.7 -0.9 67 31-107 2-69 (69)
5 2alg_A Non-specific lipid tran 99.5 5.1E-16 1.8E-20 108.3 -1.9 68 30-103 2-80 (92)
6 1siy_A LTP 1, NS-LTP1, nonspec 99.5 1.9E-15 6.4E-20 105.2 -1.1 67 31-103 2-79 (91)
7 1bwo_A NS-LTP1, nonspecific li 99.5 2E-15 6.9E-20 104.9 -1.1 67 31-103 2-79 (90)
8 1t12_A LTP 1, nonspecific lipi 99.5 4.9E-15 1.7E-19 103.3 -0.2 67 30-103 2-79 (91)
9 1afh_A Maize nonspecific lipid 99.4 4.5E-15 1.6E-19 103.7 -1.1 68 30-103 2-81 (93)
10 3ob4_A Conglutin, maltose ABC 94.1 0.0015 5E-08 55.9 -4.9 57 51-109 429-491 (500)
11 1hyp_A Hydrophobic protein fro 92.1 0.027 9.2E-07 37.9 -0.0 71 30-108 6-79 (80)
12 1hss_A 0.19 alpha-amylase inhi 85.9 0.057 2E-06 39.1 -2.2 65 35-102 16-104 (124)
13 2ds2_B Sweet protein mabinlin- 80.0 0.17 6E-06 33.0 -1.5 54 51-108 8-69 (72)
14 2lvf_A 2S albumin; allergen, c 80.0 0.13 4.3E-06 36.5 -2.4 70 35-109 17-108 (114)
15 1pnb_B Napin BNIB; napin IA an 76.7 0.34 1.2E-05 31.7 -0.8 53 51-107 12-71 (75)
16 1s6d_A Albumin 8; all helix, f 75.7 0.65 2.2E-05 32.2 0.3 74 29-107 8-102 (103)
17 1bea_A Bifunctional amylase/se 68.4 1.7 5.7E-05 31.4 1.1 71 35-108 16-117 (127)
18 1psy_A 2S albumin, RICC3; albu 67.7 0.87 3E-05 32.7 -0.5 72 30-109 16-121 (125)
19 1sm7_A Recombinant IB pronapin 65.8 0.68 2.3E-05 32.2 -1.4 69 35-107 14-105 (109)
20 1w2q_A Conglutin, ARA H 6; all 62.3 1.8 6E-05 31.2 0.2 82 28-111 12-122 (127)
21 1b1u_A Protein (alpha-amylase/ 58.5 1.5 5.1E-05 31.4 -0.7 67 34-103 15-109 (122)
22 4gyx_A Type III collagen fragm 21.0 39 0.0013 18.0 1.1 10 48-57 22-31 (31)
No 1
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.56 E-value=3.5e-16 Score=105.67 Aligned_cols=68 Identities=24% Similarity=0.542 Sum_probs=56.0
Q ss_pred cchh---hccccchhhhcCC--CCCCccchhhhhhccCCCCccccccccCccccccccCCCCHHHHhhccccCCCCCCC
Q 038792 30 TYCL---NRLAPCLRYLNGS--RDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNP 103 (148)
Q Consensus 30 ~~C~---~~L~pCl~yv~g~--~~P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~~p~ 103 (148)
.+|. .+|.||++|++++ ..|+++||+++|+ .++.|+|.+++++. ++.++||.++|++||++||+++|+
T Consensus 3 ~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~---~~~~ClC~~~~~~~---~~~~gin~~~A~~LP~~Cgv~~p~ 75 (77)
T 2rkn_A 3 DLCGMSQDELNECKPAVSKENPTSPSQPCCTALQH---ADFACLCGYKNSPW---LGSFGVDPELASALPKQCGLANAP 75 (77)
T ss_dssp CBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTT---CCHHHHHTTTTCHH---HHHHTBCHHHHHHHHHHTTCSCCC
T ss_pred chHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHh---cCcCCcCcccCCcc---hhhcCcCHHHHHHHHHHcCCCCCC
Confidence 4686 5689999999974 4788899999998 35799999877642 234689999999999999999875
No 2
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.55 E-value=2e-16 Score=110.90 Aligned_cols=71 Identities=28% Similarity=0.667 Sum_probs=58.2
Q ss_pred cchh---hccccchhhhcCCCCCCccchhhhhhccCC-----CCccccccccCccccccccCCCCHHHHhhccccCCCCC
Q 038792 30 TYCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVIKD-----NPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRV 101 (148)
Q Consensus 30 ~~C~---~~L~pCl~yv~g~~~P~~~CC~~lk~l~~~-----~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~~ 101 (148)
.+|. ..|+||++|++|++.|++.||++++++++. ++.|+|..+|+... ...+||.+||.+||++|||++
T Consensus 2 isC~~v~~~L~pCl~Yv~g~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~---~~~~in~~~a~~LP~~CgV~~ 78 (93)
T 2ljo_A 2 ISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAG---SITKLNTNNAAALPGKCGVNI 78 (93)
T ss_dssp CSSHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGG---GCTTCCHHHHHHHHHHHTCCC
T ss_pred CCHHHHHHHHHhHHHHHcCCCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhh---ccCCcCHHHHHhhhHhcCCCC
Confidence 5687 579999999998878999999999999752 45788887886421 235799999999999999998
Q ss_pred CC
Q 038792 102 NP 103 (148)
Q Consensus 102 p~ 103 (148)
|.
T Consensus 79 p~ 80 (93)
T 2ljo_A 79 PY 80 (93)
T ss_dssp SS
T ss_pred CC
Confidence 73
No 3
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.54 E-value=3.3e-16 Score=103.54 Aligned_cols=63 Identities=22% Similarity=0.491 Sum_probs=54.3
Q ss_pred hh-hccccchhhhcCCCCCCccchhhhhhccCCCCccccccccCccccccccCCCCHHHHhhccccCCCCCC
Q 038792 32 CL-NRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVN 102 (148)
Q Consensus 32 C~-~~L~pCl~yv~g~~~P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~~p 102 (148)
|. .+|.||++|+++++.|+++||+++|+. ..|+|.++|++.. . .+||.++|++||++||+++|
T Consensus 2 C~~~~L~pC~~~v~~~~~Ps~~CC~~lk~~----~~ClC~~~k~~~~---~-~~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 2 CQASQLAVCASAILSGAKPSGECCGNLRAQ----QGCFCQYAKDPTY---G-QYIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp CCSSTTHHHHHHHTTCCCCCHHHHHHHHHH----SSHHHHGGGCSTT---H-HHHTCHHHHHHHHHHTSCCS
T ss_pred CChhhcccCHHHHcCCCCCCHHHHHhhCCC----CCCCCccccCccc---c-cccCHHHHHHHHHHcCCCCC
Confidence 66 679999999998878999999999984 7999999888632 1 35999999999999999986
No 4
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.53 E-value=4e-16 Score=103.68 Aligned_cols=67 Identities=21% Similarity=0.527 Sum_probs=56.6
Q ss_pred chh-hccccchhhhcCCCCCCccchhhhhhccCCCCccccccccCccccccccCCCCHHHHhhccccCCCCCCCCCCC
Q 038792 31 YCL-NRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCL 107 (148)
Q Consensus 31 ~C~-~~L~pCl~yv~g~~~P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~~p~~~C~ 107 (148)
+|. .+|.||++|++++..|+++||+++|+. ..|+|.++|++.. . .+||.++|++||++||+++| .|.
T Consensus 2 ~C~~~~L~pC~~~v~~~~~Ps~~CC~~lk~~----~~ClC~~~k~~~~---~-~~in~~~A~~Lp~~Cgv~~P--~C~ 69 (69)
T 1l6h_A 2 GCNAGQLTVCTGAIAGGARPTAACCSSLRAQ----QGCFCQFAKDPRY---G-RYVNSPNARKAVSSCGIALP--TCH 69 (69)
T ss_dssp CSTTTTHHHHHHHHTTCCSTTHHHHHHHHHH----HHHHHHHTTCSSH---H-HHTTTTTGGGCCCCCSSCSC--CCC
T ss_pred CCChhhcccCHHHHcCCCCCCHHHHHhhCCC----CCCCCccccCccc---c-cccCHHHHHHHHHHcCCCCC--CCC
Confidence 577 679999999998878999999999984 7999999887632 2 35999999999999999986 463
No 5
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.51 E-value=5.1e-16 Score=108.32 Aligned_cols=68 Identities=34% Similarity=0.768 Sum_probs=55.7
Q ss_pred cchh---hccccchhhhcCCCCCCccchhhhhhcc-------CCCCccccccccCccccccccC-CCCHHHHhhccccCC
Q 038792 30 TYCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVI-------KDNPECLCSMISNRGSRRAEEA-GINVSAAQELPGKCG 98 (148)
Q Consensus 30 ~~C~---~~L~pCl~yv~g~~~P~~~CC~~lk~l~-------~~~~~ClC~~lk~~~~~~~~~~-~in~~~a~~LP~~Cg 98 (148)
.+|. .+|.||++|++|++.|+++||+++|+++ ++++.|+|.+... ..+ +||.++|++||++||
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~------~~~~~in~~~A~~LP~~Cg 75 (92)
T 2alg_A 2 ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLS------ASVPGVNPNNAAALPGKCG 75 (92)
T ss_dssp CCHHHHHHHHGGGHHHHHHCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHH------HHSTTCCHHHHHHHHHHTT
T ss_pred CChHHHHHhccCcHHHHcCCCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcc------cccCccChHHHHHHHHHcC
Confidence 4687 4799999999987778899999999987 4557899974221 224 899999999999999
Q ss_pred CCCCC
Q 038792 99 QRVNP 103 (148)
Q Consensus 99 v~~p~ 103 (148)
+++|+
T Consensus 76 v~~p~ 80 (92)
T 2alg_A 76 VSIPY 80 (92)
T ss_dssp CCCSS
T ss_pred CCCCC
Confidence 99875
No 6
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.48 E-value=1.9e-15 Score=105.25 Aligned_cols=67 Identities=36% Similarity=0.746 Sum_probs=54.1
Q ss_pred chh---hccccchhhhcCCCCCCccchhhhhhccC-------CCCccccccccCccccccccC-CCCHHHHhhccccCCC
Q 038792 31 YCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVIK-------DNPECLCSMISNRGSRRAEEA-GINVSAAQELPGKCGQ 99 (148)
Q Consensus 31 ~C~---~~L~pCl~yv~g~~~P~~~CC~~lk~l~~-------~~~~ClC~~lk~~~~~~~~~~-~in~~~a~~LP~~Cgv 99 (148)
+|. ..|.||++|+++++.|+++||+++|++++ +++.|+|. ++. +..+ +||.++|++||++||+
T Consensus 2 ~C~~v~~~L~pCl~yv~~~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~--k~~----~~~~~~in~~~A~~LP~~Cgv 75 (91)
T 1siy_A 2 TCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCL--KAA----AGAVRGINPNNAEALPGKCGV 75 (91)
T ss_dssp CTTTTHHHHHHHHHHHTSCSCCCHHHHHHHHHHHTTTCSSHHHHHHHHHH--HHH----TTCCSSCCHHHHHHHHHHHTC
T ss_pred CHHHHHHhccCcHHHHhCCCCCcHHHHHHHHHHHhhhccCCCCCcCCccc--CCc----ccccCCcCHHHHHHHHHHcCC
Confidence 476 57999999999876688999999999864 24589996 542 2234 7999999999999999
Q ss_pred CCCC
Q 038792 100 RVNP 103 (148)
Q Consensus 100 ~~p~ 103 (148)
++|+
T Consensus 76 ~~p~ 79 (91)
T 1siy_A 76 NIPY 79 (91)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9774
No 7
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.47 E-value=2e-15 Score=104.94 Aligned_cols=67 Identities=27% Similarity=0.633 Sum_probs=54.1
Q ss_pred chh---hccccchhhhcCCCCCCccchhhhhhccC-------CCCccccccccCccccccccC-CCCHHHHhhccccCCC
Q 038792 31 YCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVIK-------DNPECLCSMISNRGSRRAEEA-GINVSAAQELPGKCGQ 99 (148)
Q Consensus 31 ~C~---~~L~pCl~yv~g~~~P~~~CC~~lk~l~~-------~~~~ClC~~lk~~~~~~~~~~-~in~~~a~~LP~~Cgv 99 (148)
+|. .+|.||++|++|++.|+++||+++|++++ ++..|+|. ++.. ..+ +||.++|++||++||+
T Consensus 2 ~C~~v~~~L~pCl~y~~~~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClCl--k~~~----~~~~~in~~~A~~LP~~C~v 75 (90)
T 1bwo_A 2 DCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCL--KGIA----RGIHNLNEDNARSIPPKCGV 75 (90)
T ss_dssp CHHHHHHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHH--HHHH----TTCTTCCHHHHHTHHHHHTC
T ss_pred CHHHHHHhhcccHHHHcCCCCCCHHHhHHHHHHHhhccCCCCCCccCcCc--cCch----hccCCcCHHHHHHHHHHcCC
Confidence 576 57999999999876688899999999873 25689994 5431 223 7999999999999999
Q ss_pred CCCC
Q 038792 100 RVNP 103 (148)
Q Consensus 100 ~~p~ 103 (148)
++|+
T Consensus 76 ~~p~ 79 (90)
T 1bwo_A 76 NLPY 79 (90)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9875
No 8
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.46 E-value=4.9e-15 Score=103.26 Aligned_cols=67 Identities=33% Similarity=0.723 Sum_probs=53.8
Q ss_pred cchh---hccccchhhhcCCCCCCccchhhhhhccCC-------CCccccccccCccccccccC-CCCHHHHhhccccCC
Q 038792 30 TYCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVIKD-------NPECLCSMISNRGSRRAEEA-GINVSAAQELPGKCG 98 (148)
Q Consensus 30 ~~C~---~~L~pCl~yv~g~~~P~~~CC~~lk~l~~~-------~~~ClC~~lk~~~~~~~~~~-~in~~~a~~LP~~Cg 98 (148)
.+|. ..|.||++|++|++.|+ .||++++++++. ++.|+|. ++. +..+ +||.++|.+||++||
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~~P~-~CC~gv~~l~~~a~t~~dr~~~ClCl--k~~----~~~~~~in~~~A~~LP~~C~ 74 (91)
T 1t12_A 2 ITCGQVTSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTCL--KSA----AGAISGINLGKAAGLPSTCG 74 (91)
T ss_dssp CCHHHHHHHTHHHHHHHTTSSCCT-THHHHHHHHHHTTCSTHHHHHHHHHH--HHH----HHHCTTCCHHHHHHHHHHTT
T ss_pred CChHHHHHhccCcHHHHcCCCChH-HHHHHHHHHHhhccCCCCCCccCCCc--ccc----ccccCCcChhHHHHHHHHcC
Confidence 4686 57999999999865576 999999999753 5789995 542 1234 899999999999999
Q ss_pred CCCCC
Q 038792 99 QRVNP 103 (148)
Q Consensus 99 v~~p~ 103 (148)
+++|+
T Consensus 75 v~~p~ 79 (91)
T 1t12_A 75 VNIPY 79 (91)
T ss_dssp CCCSS
T ss_pred CCCCC
Confidence 99874
No 9
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.44 E-value=4.5e-15 Score=103.68 Aligned_cols=68 Identities=28% Similarity=0.678 Sum_probs=53.5
Q ss_pred cchh---hccccchhhhcCCC-CCCccchhhhhhccC-------CCCccccccccCccccccccC-CCCHHHHhhccccC
Q 038792 30 TYCL---NRLAPCLRYLNGSR-DVPDSCCDPLKSVIK-------DNPECLCSMISNRGSRRAEEA-GINVSAAQELPGKC 97 (148)
Q Consensus 30 ~~C~---~~L~pCl~yv~g~~-~P~~~CC~~lk~l~~-------~~~~ClC~~lk~~~~~~~~~~-~in~~~a~~LP~~C 97 (148)
.+|. ..|.||++|++|++ .|+++||+++|++++ ++..|+|. +... ..+ +||.++|++||++|
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~--~~~~----~~~~~in~~~A~~LP~~C 75 (93)
T 1afh_A 2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCL--KNAA----AGVSGLNAGNAASIPSKC 75 (93)
T ss_dssp CSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHH--HHHH----TTSTTCCHHHHHHHHHHH
T ss_pred CChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEee--cccc----ccccCcCHHHHHHHHHHc
Confidence 4686 57999999999876 577799999999962 34689996 3221 123 79999999999999
Q ss_pred CCCCCC
Q 038792 98 GQRVNP 103 (148)
Q Consensus 98 gv~~p~ 103 (148)
|+++|+
T Consensus 76 ~v~~p~ 81 (93)
T 1afh_A 76 GVSIPY 81 (93)
T ss_dssp HCCCSS
T ss_pred CCCCCC
Confidence 999874
No 10
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=94.13 E-value=0.0015 Score=55.91 Aligned_cols=57 Identities=23% Similarity=0.603 Sum_probs=36.2
Q ss_pred ccchhhhhhccCCCCccccccccCccccccc------cCCCCHHHHhhccccCCCCCCCCCCCCC
Q 038792 51 DSCCDPLKSVIKDNPECLCSMISNRGSRRAE------EAGINVSAAQELPGKCGQRVNPLGCLRG 109 (148)
Q Consensus 51 ~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~------~~~in~~~a~~LP~~Cgv~~p~~~C~~~ 109 (148)
..||+.|+.+. .++.|.|..++..-..... +...-..+|..||..||+. .|..|+-.
T Consensus 429 ~~cc~~l~~~~-~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~-~~~~c~~~ 491 (500)
T 3ob4_A 429 ERCCNELNEFE-NNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLR-APQRCDLD 491 (500)
T ss_dssp HHHHHHHGGGT-TCHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCC-CCSCCCCC
T ss_pred HHHHHHHHhCC-cccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCC-CCccCCcc
Confidence 47999999872 1279999877652110000 0001135699999999997 45679843
No 11
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=92.08 E-value=0.027 Score=37.94 Aligned_cols=71 Identities=25% Similarity=0.533 Sum_probs=48.9
Q ss_pred cchhhccccchhhhcCCCCCCccchhhhhhccCC-CCccccccccCccccccccCCCCHHHHhh-ccccCCCCCCCCC-C
Q 038792 30 TYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKD-NPECLCSMISNRGSRRAEEAGINVSAAQE-LPGKCGQRVNPLG-C 106 (148)
Q Consensus 30 ~~C~~~L~pCl~yv~g~~~P~~~CC~~lk~l~~~-~~~ClC~~lk~~~~~~~~~~~in~~~a~~-LP~~Cgv~~p~~~-C 106 (148)
..|- +|.-|.+-+.|...|...||+-++++.+. ...|+|..+|- . .. +|.+.+.+ |-..||-..|+.. |
T Consensus 6 ~~CP-kLgvCanvL~g~~~~~~~CC~Ll~GL~dleAAvCLCtaik~-----L-gi-lnlpv~L~llln~Cgk~~P~gF~C 77 (80)
T 1hyp_A 6 PSCP-DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRA-----L-GI-LNLNRNLQLILNSCGRSYPSNATC 77 (80)
T ss_dssp CCSC-CCGGGGGGGGTCCTTHHHHHHHHHTSCHHHHHHHHHHHHHH-----H-TC-SCHHHHHHHHHHHTTCSSCCCCCC
T ss_pred CCCC-chhHHHHHhCcCCCCCCccchhhhCcchhhhhhhhhhhccc-----c-ce-eecChhHHHHHHHhCCcCcCCCCC
Confidence 3465 68888887754323456899999999764 34799987762 1 13 57776666 5678999988754 7
Q ss_pred CC
Q 038792 107 LR 108 (148)
Q Consensus 107 ~~ 108 (148)
..
T Consensus 78 ~~ 79 (80)
T 1hyp_A 78 PR 79 (80)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 12
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=85.87 E-value=0.057 Score=39.14 Aligned_cols=65 Identities=20% Similarity=0.357 Sum_probs=40.4
Q ss_pred ccccchhhhcC----CCCC---CccchhhhhhccCCCCccccccccCccccccccCC-----------------CCHHHH
Q 038792 35 RLAPCLRYLNG----SRDV---PDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAG-----------------INVSAA 90 (148)
Q Consensus 35 ~L~pCl~yv~g----~~~P---~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~-----------------in~~~a 90 (148)
.|..|..|+.. ...| ...||+.|+.+ .+.|.|..+...-.......+ +-...|
T Consensus 16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A 92 (124)
T 1hss_A 16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTA 92 (124)
T ss_dssp CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS---CTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHH
T ss_pred cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHH
Confidence 48889999952 2223 24699999997 489999766542110000000 111258
Q ss_pred hhccccCCCCCC
Q 038792 91 QELPGKCGQRVN 102 (148)
Q Consensus 91 ~~LP~~Cgv~~p 102 (148)
..||..||+..+
T Consensus 93 ~~LP~~Cnl~~~ 104 (124)
T 1hss_A 93 ASITAVCRLPIV 104 (124)
T ss_dssp TTHHHHTTCCEE
T ss_pred HhchhhcCCCCC
Confidence 889999999866
No 13
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=80.02 E-value=0.17 Score=33.05 Aligned_cols=54 Identities=22% Similarity=0.514 Sum_probs=34.2
Q ss_pred ccchhhhhhccCCCCccccccccCcccccccc--------CCCCHHHHhhccccCCCCCCCCCCCC
Q 038792 51 DSCCDPLKSVIKDNPECLCSMISNRGSRRAEE--------AGINVSAAQELPGKCGQRVNPLGCLR 108 (148)
Q Consensus 51 ~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~--------~~in~~~a~~LP~~Cgv~~p~~~C~~ 108 (148)
..||+.++.+ ++.|.|..++......... ..=...+|..||..||+.. +..|+-
T Consensus 8 qqCC~eL~~~---~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~-~~~C~~ 69 (72)
T 2ds2_B 8 RQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPN-IGACPF 69 (72)
T ss_dssp HHHHHHHTTS---CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTT-CCCCCC
T ss_pred HHHHHHHHhc---CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCC-CCcCCC
Confidence 4699999986 6899998776531000000 0123467889999999953 345763
No 14
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=79.96 E-value=0.13 Score=36.54 Aligned_cols=70 Identities=21% Similarity=0.526 Sum_probs=43.6
Q ss_pred ccccchhhhc----CCC---CCC-------ccchhhhhhccCCCCccccccccCccccccccCC-C---C----HHHHhh
Q 038792 35 RLAPCLRYLN----GSR---DVP-------DSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAG-I---N----VSAAQE 92 (148)
Q Consensus 35 ~L~pCl~yv~----g~~---~P~-------~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~-i---n----~~~a~~ 92 (148)
.|..|..|+. ++. .+. ..||+.|+.+ ++.|.|..|+..........+ + . ...|..
T Consensus 17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv---~~~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~q~A~~ 93 (114)
T 2lvf_A 17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAEN 93 (114)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHS---CHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHC---CcCccCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHh
Confidence 5899999995 221 111 1399999997 689999876542100000111 1 1 246889
Q ss_pred ccccCCCCCCCCCCCCC
Q 038792 93 LPGKCGQRVNPLGCLRG 109 (148)
Q Consensus 93 LP~~Cgv~~p~~~C~~~ 109 (148)
||..||+. |..|.=.
T Consensus 94 LP~~C~i~--p~~C~f~ 108 (114)
T 2lvf_A 94 IPSRCNLS--PMRCPMG 108 (114)
T ss_dssp HHHHHCCC--CSCCTTT
T ss_pred ChHhcCCC--cccCCCC
Confidence 99999996 4568654
No 15
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=76.68 E-value=0.34 Score=31.73 Aligned_cols=53 Identities=21% Similarity=0.514 Sum_probs=33.8
Q ss_pred ccchhhhhhccCCCCccccccccCccccc--cccCC-----CCHHHHhhccccCCCCCCCCCCC
Q 038792 51 DSCCDPLKSVIKDNPECLCSMISNRGSRR--AEEAG-----INVSAAQELPGKCGQRVNPLGCL 107 (148)
Q Consensus 51 ~~CC~~lk~l~~~~~~ClC~~lk~~~~~~--~~~~~-----in~~~a~~LP~~Cgv~~p~~~C~ 107 (148)
..||+.++.+ ++.|.|..++...... -..++ -...+|..||..||+..+ ..|+
T Consensus 12 qqCC~qL~~~---~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~-~~C~ 71 (75)
T 1pnb_B 12 EQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI-GTCP 71 (75)
T ss_dssp HHHHHHHHTS---CGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT-CCCC
T ss_pred HHHHHHHHhC---CcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC-CCCC
Confidence 5799999997 5899998776531000 00011 124567789999999643 4575
No 16
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=75.66 E-value=0.65 Score=32.21 Aligned_cols=74 Identities=26% Similarity=0.456 Sum_probs=46.2
Q ss_pred ccchh-----hc-cccchhhhcCC---CC----------CCccchhhhhhccCCCCccccccccCccccccc--cCCCCH
Q 038792 29 STYCL-----NR-LAPCLRYLNGS---RD----------VPDSCCDPLKSVIKDNPECLCSMISNRGSRRAE--EAGINV 87 (148)
Q Consensus 29 ~~~C~-----~~-L~pCl~yv~g~---~~----------P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~--~~~in~ 87 (148)
...|. .+ |.+|..|+.-. .. .-..||+-++.+ ++.|.|..++...-.... ...-..
T Consensus 8 ~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~---~~~CrC~al~~~~Q~q~~g~q~~~~~ 84 (103)
T 1s6d_A 8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVM 84 (103)
T ss_dssp SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHHH
T ss_pred CcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc---CcccCcHHHHHHHHHHhcchhHHHHH
Confidence 45686 25 89999999631 11 124799999986 589999877542100000 001123
Q ss_pred HHHhhccccCCCCCCCCCCC
Q 038792 88 SAAQELPGKCGQRVNPLGCL 107 (148)
Q Consensus 88 ~~a~~LP~~Cgv~~p~~~C~ 107 (148)
.+|..||..||+. |..|+
T Consensus 85 q~A~~LP~~C~i~--p~~C~ 102 (103)
T 1s6d_A 85 SMAHNLPIECNLM--SQPCQ 102 (103)
T ss_dssp HHHHHHHHHTTSS--SSCSC
T ss_pred HHHHhcHHhcCCC--cccCC
Confidence 4688999999995 44474
No 17
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=68.36 E-value=1.7 Score=31.42 Aligned_cols=71 Identities=18% Similarity=0.271 Sum_probs=42.8
Q ss_pred ccccchhhhcC----C-C-CCC----ccchhhhhhccCCCCccccccccCcccccc---------ccCCCC--------H
Q 038792 35 RLAPCLRYLNG----S-R-DVP----DSCCDPLKSVIKDNPECLCSMISNRGSRRA---------EEAGIN--------V 87 (148)
Q Consensus 35 ~L~pCl~yv~g----~-~-~P~----~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~---------~~~~in--------~ 87 (148)
.|..|..|+.. . . .|. ..||+.++.+ .+.|.|..+...-+... ..++.- .
T Consensus 16 pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~ 92 (127)
T 1bea_A 16 PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQR 92 (127)
T ss_dssp CCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTS---CGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHH
T ss_pred cchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHH
Confidence 48899999941 1 2 231 3599999997 58999976543211000 001111 3
Q ss_pred HHHhhc--cccCCCCCCC--CCCCC
Q 038792 88 SAAQEL--PGKCGQRVNP--LGCLR 108 (148)
Q Consensus 88 ~~a~~L--P~~Cgv~~p~--~~C~~ 108 (148)
..|..| |..||+..+. ..|..
T Consensus 93 ~~A~~Lv~P~~Cnl~~~~g~~~C~~ 117 (127)
T 1bea_A 93 GFAATLVTEAECNLATISGVAECPW 117 (127)
T ss_dssp HHHTTTTSTTTTCCCCTTSSSCCTT
T ss_pred HHHHhcCCcccCCCCCCCCCCCCCc
Confidence 357889 9999997652 13655
No 18
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=67.74 E-value=0.87 Score=32.69 Aligned_cols=72 Identities=32% Similarity=0.668 Sum_probs=45.2
Q ss_pred cchh-----hccccchhhhcCC---CC--------C-------C----ccchhhhhhccCCCCccccccccCcccc---c
Q 038792 30 TYCL-----NRLAPCLRYLNGS---RD--------V-------P----DSCCDPLKSVIKDNPECLCSMISNRGSR---R 79 (148)
Q Consensus 30 ~~C~-----~~L~pCl~yv~g~---~~--------P-------~----~~CC~~lk~l~~~~~~ClC~~lk~~~~~---~ 79 (148)
..|. ..|.+|..|+.-. .. | . ..||+.|+.+ ++.|.|..|+..... .
T Consensus 16 q~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~---~~~C~C~aL~~~v~~~~qQ 92 (125)
T 1psy_A 16 QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQ 92 (125)
T ss_dssp SSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhc---CcccccHHHHHHHHHHHHH
Confidence 4686 3689999999631 11 2 1 3699999986 689999877542100 0
Q ss_pred cccCCC----CHHHHhhccccCCCCCCCCCCCCC
Q 038792 80 AEEAGI----NVSAAQELPGKCGQRVNPLGCLRG 109 (148)
Q Consensus 80 ~~~~~i----n~~~a~~LP~~Cgv~~p~~~C~~~ 109 (148)
...-+= -..+|..||..||+ .|.-.
T Consensus 93 gq~~gqq~~~~~q~A~~LP~~C~i-----~C~~~ 121 (125)
T 1psy_A 93 GQLHGEESERVAQRAGEIVSSCGV-----RCMRQ 121 (125)
T ss_dssp TTCCTTCSHHHHHHHHHHHHHHTC-----STTTS
T ss_pred hhhhHHHHHHHHHHHHhhHHHcCC-----cCCCC
Confidence 000011 13568889999999 47653
No 19
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=65.76 E-value=0.68 Score=32.22 Aligned_cols=69 Identities=23% Similarity=0.577 Sum_probs=41.9
Q ss_pred ccccchhhhc----CCC---CC------C---ccchhhhhhccCCCCccccccccCccccccc--cCC-----CCHHHHh
Q 038792 35 RLAPCLRYLN----GSR---DV------P---DSCCDPLKSVIKDNPECLCSMISNRGSRRAE--EAG-----INVSAAQ 91 (148)
Q Consensus 35 ~L~pCl~yv~----g~~---~P------~---~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~--~~~-----in~~~a~ 91 (148)
.|.+|..|+. ++. .| + ..||+.++.+ ++.|.|..++..-..... .++ -...+|.
T Consensus 14 ~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v---~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~ 90 (109)
T 1sm7_A 14 HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAK 90 (109)
T ss_dssp CCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTT---CHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTS
T ss_pred cHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhc---CccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 3899999996 211 12 1 3699999987 589999877642100000 011 1223477
Q ss_pred hccccCCCCCCCCCCC
Q 038792 92 ELPGKCGQRVNPLGCL 107 (148)
Q Consensus 92 ~LP~~Cgv~~p~~~C~ 107 (148)
.||..||+.. +..|.
T Consensus 91 ~LP~~Cnl~~-~~~C~ 105 (109)
T 1sm7_A 91 NLPNVCNMKQ-IGTCP 105 (109)
T ss_dssp SHHHHSCCCS-SCSSC
T ss_pred hCHHhcCCCC-CCCCC
Confidence 8999999963 23575
No 20
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=62.32 E-value=1.8 Score=31.20 Aligned_cols=82 Identities=20% Similarity=0.461 Sum_probs=49.9
Q ss_pred cccchh-----hccccchhhhcCC---CC----C-----------CccchhhhhhccCCCCccccccccCccccccccC-
Q 038792 28 QSTYCL-----NRLAPCLRYLNGS---RD----V-----------PDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEA- 83 (148)
Q Consensus 28 ~~~~C~-----~~L~pCl~yv~g~---~~----P-----------~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~- 83 (148)
....|. ..|.+|..|+.-. .. + -..||+.|+.+. +++.|.|..++...-..-..+
T Consensus 12 ~~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~-~~~qCrCeaL~q~~Q~qq~q~~ 90 (127)
T 1w2q_A 12 DSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQ 90 (127)
T ss_dssp TTCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTS-CCCTTHHHHHHHHHHHSCTTTT
T ss_pred cccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhc-cCCCccCHHHHHHHHHHHhhhh
Confidence 345686 3689999999631 10 1 136999999863 358999987765310000001
Q ss_pred C--CC---HHHHhhccccCCCCCCCCCCCCCCC
Q 038792 84 G--IN---VSAAQELPGKCGQRVNPLGCLRGSP 111 (148)
Q Consensus 84 ~--in---~~~a~~LP~~Cgv~~p~~~C~~~~p 111 (148)
+ .. ..+|..||..||+.-| ..|+-.++
T Consensus 91 gqq~~~~~~q~A~~LP~~C~i~~~-~~C~~~~~ 122 (127)
T 1w2q_A 91 DRQMVQQFKRELMSLPQQCNFRAP-QRCDLDVS 122 (127)
T ss_dssp TSTTHHHHHHHHHHHHHHHTCCCS-SCCSCSSS
T ss_pred hHHHHHHHHHHHHHhHHhcCCCCC-CcCCCCCC
Confidence 1 11 3568899999999533 45875433
No 21
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=58.52 E-value=1.5 Score=31.43 Aligned_cols=67 Identities=18% Similarity=0.272 Sum_probs=40.9
Q ss_pred hccccchhhhcC----C-C-CCC----ccchhhhhhccCCCCccccccccCccccccc--------cCCCC--------H
Q 038792 34 NRLAPCLRYLNG----S-R-DVP----DSCCDPLKSVIKDNPECLCSMISNRGSRRAE--------EAGIN--------V 87 (148)
Q Consensus 34 ~~L~pCl~yv~g----~-~-~P~----~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~--------~~~in--------~ 87 (148)
..|..|..|+.. . . .|. ..||+.++.+ .+.|.|..+...-..... .++.- .
T Consensus 15 ~~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~ 91 (122)
T 1b1u_A 15 NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQR 91 (122)
T ss_dssp STTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHS---CHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHH
T ss_pred ccchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhC---CccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHH
Confidence 358899999942 1 2 232 3599999997 489999765432110000 01111 1
Q ss_pred HHHhhc--cccCCCCCCC
Q 038792 88 SAAQEL--PGKCGQRVNP 103 (148)
Q Consensus 88 ~~a~~L--P~~Cgv~~p~ 103 (148)
..|..| |..||+..+.
T Consensus 92 ~~A~~Lv~P~~Cnl~~~~ 109 (122)
T 1b1u_A 92 AFAPKLVTEVECNLATIH 109 (122)
T ss_dssp HHGGGTTSTTTTCCCCTT
T ss_pred HHHHhcCCcccCCCCCCC
Confidence 357789 9999997653
No 22
>4gyx_A Type III collagen fragment in A HOST peptide STAB the cysteine knot; collagen triple helix, type III collagen cysteine knot, BLOO clotting; 1.49A {Homo sapiens}
Probab=20.97 E-value=39 Score=17.95 Aligned_cols=10 Identities=30% Similarity=0.989 Sum_probs=5.4
Q ss_pred CCCccchhhh
Q 038792 48 DVPDSCCDPL 57 (148)
Q Consensus 48 ~P~~~CC~~l 57 (148)
-|+..||.++
T Consensus 22 gppgpccggv 31 (31)
T 4gyx_A 22 GPPGPCCGGV 31 (31)
T ss_dssp CCCCCCC---
T ss_pred CCCCCCccCC
Confidence 4677899874
Done!