Your job contains 1 sequence.
>038793
ETIDAPSETETDDLNSTEISDEDDCEGEIETDDLIFTEISDKDDDYNLLLWQAFAGPPPS
LPKKGDLVVYFPQGHLEYSAPASVSKAPPTFDLKPEIICRVADVRYLVSKKTDKVYTKMT
LLPLPEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFYKKLRASDQSKKKIVIRAKD
AENVFPFLAHLDYKKQINYSVIAKDVHGVAWKFNFVDGKSRRHYLTVGWKYFVRQKNLVP
GDTVIFIRYAY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038793
(251 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 467 1.1e-43 1
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 350 2.4e-31 1
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 312 5.2e-27 1
TAIR|locus:2152642 - symbol:ARF8 "auxin response factor 8... 306 3.3e-26 1
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 289 1.5e-24 1
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 281 8.9e-24 1
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 284 9.8e-24 1
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 280 3.3e-23 1
TAIR|locus:2025991 - symbol:ARF1 "auxin response factor 1... 270 1.6e-22 1
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 269 1.9e-22 1
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 263 7.3e-22 1
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 259 4.0e-21 1
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 240 2.2e-19 1
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 239 2.9e-19 1
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 238 7.7e-19 1
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 228 3.6e-18 1
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 223 1.5e-17 1
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 220 3.3e-17 1
TAIR|locus:2037169 - symbol:ARF23 "auxin response factor ... 210 4.1e-17 1
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 185 1.9e-13 1
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 171 1.1e-10 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 133 2.0e-06 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 133 2.1e-06 1
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 125 7.5e-06 1
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 122 2.6e-05 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 122 3.7e-05 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 113 0.00041 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 112 0.00062 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 111 0.00079 1
TAIR|locus:2026058 - symbol:AT1G51120 species:3702 "Arabi... 110 0.0010 1
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 467 (169.5 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 104/205 (50%), Positives = 135/205 (65%)
Query: 50 LWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPASVSKAP---PTFDLKPEIICRVADVRY 106
LW A AGP LPKKG++VVYFPQGHLE A S S +P P FDL P+I+CRV +V+
Sbjct: 66 LWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYS-SPLEIPKFDLNPQIVCRVVNVQL 124
Query: 107 LVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFYKKLRA 166
L +K TD+VYT++TLLPL E N +GKE+++L + +R+G S+ TP +F K L A
Sbjct: 125 LANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGS-SSVKRTPHMFCKTLTA 183
Query: 167 SDQSKKK-IVIRAKDAENVFPFLAHLDYKKQI-NYSVIAKDVHGVAWKFNFV-DGKSRRH 223
SD S + + AE+ F A LDYK+Q + +IAKD+HGV WKF + G+ RRH
Sbjct: 184 SDTSTHGGFSVPRRAAEDCF---APLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRH 240
Query: 224 YLTVGWKYFVRQKNLVPGDTVIFIR 248
LT GW FV QKNLV GD V+F+R
Sbjct: 241 LLTTGWSIFVSQKNLVSGDAVLFLR 265
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 350 (128.3 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 86/206 (41%), Positives = 122/206 (59%)
Query: 48 LLLWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPASVSKAPPTFDLKPEIICRVADVRYL 107
L LW A AGP SLPK+G LV+YFPQGHLE AP S A + L P + CR+ DV+
Sbjct: 53 LELWHACAGPLISLPKRGSLVLYFPQGHLE-QAP-DFSAA--IYGLPPHVFCRILDVKLH 108
Query: 108 VSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLV-VDN-KRDGEGSTANSTPPLFYKKLR 165
TD+VY +++LLP E E+ + K + ++ VD + D E ++TP +F K L
Sbjct: 109 AETTTDEVYAQVSLLP--E--SEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLT 164
Query: 166 ASDQSKKK-IVIRAKDAENVFPFLAHLDYKK-QINYSVIAKDVHGVAWKFNFV-DGKSRR 222
ASD S + + AE+ FP LDY + + + ++A+D+HG+ W+F + G+ RR
Sbjct: 165 ASDTSTHGGFSVPRRAAEDCFP---PLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRR 221
Query: 223 HYLTVGWKYFVRQKNLVPGDTVIFIR 248
H LT GW FV +K LV GD V+F+R
Sbjct: 222 HLLTTGWSAFVNKKKLVSGDAVLFLR 247
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 312 (114.9 bits), Expect = 5.2e-27, P = 5.2e-27
Identities = 78/205 (38%), Positives = 106/205 (51%)
Query: 50 LWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPASVSKAPPTFD---LKPEIICRVADVRY 106
LW A AG +P V YF QGH E++ APP F + P I+CRV V++
Sbjct: 11 LWHACAGSMVQIPSLNSTVFYFAQGHTEHA------HAPPDFHAPRVPPLILCRVVSVKF 64
Query: 107 LVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFYKKLRA 166
L +TD+V+ K+TLLPLP + + + L + DG G+ P F K L
Sbjct: 65 LADAETDEVFAKITLLPLPGN-DLDLENDAVLGLTPPSS-DGNGN-GKEKPASFAKTLTQ 121
Query: 167 SDQSKKK-IVIRAKDAENVFPFLAHLDYKKQINY-SVIAKDVHGVAWKFNFV-DGKSRRH 223
SD + + AE +FP LDY + +VIAKD+HG WKF + G RRH
Sbjct: 122 SDANNGGGFSVPRYCAETIFP---RLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRH 178
Query: 224 YLTVGWKYFVRQKNLVPGDTVIFIR 248
LT GW FV QK L+ GD+++F+R
Sbjct: 179 LLTTGWSTFVNQKKLIAGDSIVFLR 203
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 306 (112.8 bits), Expect = 3.3e-26, P = 3.3e-26
Identities = 86/210 (40%), Positives = 107/210 (50%)
Query: 47 NLLLWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPASVSKAP---PTF-DLKPEIICRVA 102
N LW A AGP SLP G VVYFPQGH E A + + P + L P++IC++
Sbjct: 20 NSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLH 79
Query: 103 DVRYLVSKKTDKVYTKMTLLPL-PEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFY 161
+V +TD+VY +MTL PL PE E F EL G + F
Sbjct: 80 NVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIEL------------GIPSKQPSNYFC 127
Query: 162 KKLRASDQSKKK-IVIRAKDAENVFPFLAHLDYKKQIN-YSVIAKDVHGVAWKFNFV-DG 218
K L ASD S + + AE VFP LDY Q +IA+D+H V WKF + G
Sbjct: 128 KTLTASDTSTHGGFSVPRRAAEKVFP---PLDYTLQPPAQELIARDLHDVEWKFRHIFRG 184
Query: 219 KSRRHYLTVGWKYFVRQKNLVPGDTVIFIR 248
+ +RH LT GW FV K LV GD+VIFIR
Sbjct: 185 QPKRHLLTTGWSVFVSAKRLVAGDSVIFIR 214
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 289 (106.8 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 74/203 (36%), Positives = 102/203 (50%)
Query: 50 LWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPASVSKAPPTFDLKPEIICRVADVRYLVS 109
LW A AG +P V YFPQGH E +A V + P ++CRV ++Y+
Sbjct: 20 LWHACAGGMVRMPPMNSKVFYFPQGHAE-NAYDCVDFG--NLPIPPMVLCRVLAIKYMAD 76
Query: 110 KKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGEGSTANSTP-PLFYKKLRASD 168
++D+V+ K+ L+PL K E D + D G +NS P F K L SD
Sbjct: 77 AESDEVFAKLRLIPL--------KDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSD 128
Query: 169 QSKKK-IVIRAKDAENVFPFLAHLDYKKQINY-SVIAKDVHGVAWKFNFV-DGKSRRHYL 225
+ + AE +FP LDY + +++AKDVHG WKF + G RRH L
Sbjct: 129 ANNGGGFSVPRYCAETIFP---RLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLL 185
Query: 226 TVGWKYFVRQKNLVPGDTVIFIR 248
T GW FV QK LV GD+++F+R
Sbjct: 186 TTGWSNFVNQKKLVAGDSIVFMR 208
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 281 (104.0 bits), Expect = 8.9e-24, P = 8.9e-24
Identities = 77/218 (35%), Positives = 109/218 (50%)
Query: 39 ISDKDDDYNLLLWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPAS----VSKAPPTFDLK 94
+ DD+ LW+A AGP +P+ G+ V YFPQGH+E ++ V + P F+L
Sbjct: 32 LGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLP 91
Query: 95 PEIICRVADVRYLVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGEGSTAN 154
P+I+CRV V +TD+VY ++TL P E + + L +V+ A
Sbjct: 92 PKILCRVLSVTLKAEHETDEVYAQITLQP-EE---DQSEPTSLDPPLVE--------PAK 139
Query: 155 STPPLFYKKLRASDQSKKK--IVIRAKDAENVFPFLAHLDYKKQI-NYSVIAKDVHGVAW 211
T F K L ASD S V+R K A P LD + ++A+D+HG W
Sbjct: 140 PTVDSFVKILTASDTSTHGGFSVLR-KHATECLP---SLDMTQPTPTQELVARDLHGYEW 195
Query: 212 KFNFV-DGKSRRHYLTVGWKYFVRQKNLVPGDTVIFIR 248
+F + G+ RRH LT GW FV K LV GD +F+R
Sbjct: 196 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR 233
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 284 (105.0 bits), Expect = 9.8e-24, P = 9.8e-24
Identities = 82/218 (37%), Positives = 112/218 (51%)
Query: 38 EISDKDDDYNLLLWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPASVSKAP----PTF-D 92
E++ + N LW A AGP SLP G VVYFPQGH E A AS +K P +
Sbjct: 14 EVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVA-ASTNKEVDAHIPNYPS 72
Query: 93 LKPEIICRVADVRYLVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGEGST 152
L P++IC++ +V +TD+VY +MTL PL +E +D + + G
Sbjct: 73 LHPQLICQLHNVTMHADVETDEVYAQMTLQPL--------NAQEQKDPYLPAEL---GVP 121
Query: 153 ANSTPPLFYKKLRASDQSKKK-IVIRAKDAENVFPFLAHLDYKKQIN-YSVIAKDVHGVA 210
+ F K L ASD S + + AE VFP LDY +Q ++A+D+H
Sbjct: 122 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP---PLDYSQQPPAQELMARDLHDNE 178
Query: 211 WKFNFV-DGKSRRHYLTVGWKYFVRQKNLVPGDTVIFI 247
WKF + G+ +RH LT GW FV K LV GD+V+FI
Sbjct: 179 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI 216
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 280 (103.6 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 78/210 (37%), Positives = 105/210 (50%)
Query: 47 NLLLWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPASVSKAP---PTF-DLKPEIICRVA 102
N LW A AGP SLP G LVVYFPQGH E A AS+ K P + +L ++IC +
Sbjct: 21 NSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVA-ASMQKQTDFIPNYPNLPSKLICLLH 79
Query: 103 DVRYLVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFY- 161
V +TD+VY +MTL P+ + E ++ G N P F+
Sbjct: 80 SVTLHADTETDEVYAQMTLQPVNKYDREALLASDM------------GLKLNRQPTEFFC 127
Query: 162 KKLRASDQSKKK-IVIRAKDAENVFPFLAHLDYKKQIN-YSVIAKDVHGVAWKFNFV-DG 218
K L ASD S + + AE +FP LD+ Q ++AKD+H W F + G
Sbjct: 128 KTLTASDTSTHGGFSVPRRAAEKIFP---PLDFSMQPPAQEIVAKDLHDTTWTFRHIYRG 184
Query: 219 KSRRHYLTVGWKYFVRQKNLVPGDTVIFIR 248
+ +RH LT GW FV K L GD+V+F+R
Sbjct: 185 QPKRHLLTTGWSVFVSTKRLFAGDSVLFVR 214
>TAIR|locus:2025991 [details] [associations]
symbol:ARF1 "auxin response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;IPI] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0010150 "leaf
senescence" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016246
"RNA interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 EMBL:AC007258 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U83245 EMBL:AY133723 EMBL:BT002748
IPI:IPI00518211 IPI:IPI00520405 PIR:D96621 RefSeq:NP_001031208.1
RefSeq:NP_176184.1 RefSeq:NP_849830.1 UniGene:At.74832
ProteinModelPortal:Q8L7G0 SMR:Q8L7G0 IntAct:Q8L7G0 STRING:Q8L7G0
EnsemblPlants:AT1G59750.1 EnsemblPlants:AT1G59750.3 GeneID:842268
KEGG:ath:AT1G59750 GeneFarm:3363 TAIR:At1g59750 eggNOG:NOG257828
HOGENOM:HOG000241141 InParanoid:Q8L7G0 KO:K14486 OMA:QMPSFNL
PhylomeDB:Q8L7G0 ProtClustDB:CLSN2679699 Genevestigator:Q8L7G0
GermOnline:AT1G59750 Uniprot:Q8L7G0
Length = 665
Score = 270 (100.1 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 73/205 (35%), Positives = 109/205 (53%)
Query: 50 LWQAFAGPPPSLPKKGDLVVYFPQGH---LEYSAPASVSKAPPTFDLKPEIICRVADVRY 106
LW A AGP +LP++G+ V YFP+GH LE S + + P+F+L +I+C+V +++
Sbjct: 23 LWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQR 82
Query: 107 LVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFYKKLRA 166
+TD+VY ++TLLP E+ + D V ++ E T +S F K L A
Sbjct: 83 RAEPETDEVYAQITLLP--EL---DQSEPTSPDAPV---QEPEKCTVHS----FCKTLTA 130
Query: 167 SDQSKKK-IVIRAKDAENVFPFLAHLDYKKQINYS-VIAKDVHGVAWKFNFV-DGKSRRH 223
SD S + + A++ P LD +Q + ++A D+H W F + G+ RRH
Sbjct: 131 SDTSTHGGFSVLRRHADDCLP---PLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRH 187
Query: 224 YLTVGWKYFVRQKNLVPGDTVIFIR 248
LT GW FV K LV GD IF+R
Sbjct: 188 LLTTGWSVFVSSKKLVAGDAFIFLR 212
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 269 (99.8 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 72/206 (34%), Positives = 101/206 (49%)
Query: 50 LWQAFAGPPPSLPKKGDLVVYFPQGHLEY----SAPASVSKAPPTFDLKPEIICRVADVR 105
LW+ AGP +P+ + V YFPQGH+E + ++ P F L P+I+C V +V
Sbjct: 13 LWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNVMNVS 72
Query: 106 YLVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFYKKLR 165
K TD+VY ++TL+P+ G E+ + + + E F K L
Sbjct: 73 LQAEKDTDEVYAQITLIPV---------GTEVDEPMSPDPSPPE--LQRPKVHSFSKVLT 121
Query: 166 ASDQSKKK-IVIRAKDAENVFPFLAHLDYKKQI-NYSVIAKDVHGVAWKFNFV-DGKSRR 222
ASD S + K A P LD +Q ++A+DVHG WKF + G+ RR
Sbjct: 122 ASDTSTHGGFSVLRKHATECLP---PLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRR 178
Query: 223 HYLTVGWKYFVRQKNLVPGDTVIFIR 248
H LT GW FV K LV GDT +F+R
Sbjct: 179 HLLTTGWSTFVTSKRLVAGDTFVFLR 204
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 263 (97.6 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 80/229 (34%), Positives = 109/229 (47%)
Query: 29 IETDDLIFTEISDK-DDDYNLLLWQAFAGPPPSLPKKGDLVVYFPQGHLEY---SAPASV 84
+E DD + S D LW+ AGP +P+ + V YFPQGH+E S +
Sbjct: 4 VEGDDDFGSSSSRSYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGI 63
Query: 85 -SKAPPTFDLKPEIICRVADVRYLVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVD 143
S+ P FDL P+I+CRV DV +TD+VY ++TL P E + + L +V
Sbjct: 64 NSEEIPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQP-EE---DQSEPTSLDPPIV- 118
Query: 144 NKRDGEGSTANSTPPLFYKKLRASDQSKKK--IVIRAKDAENVFPFLAHLDYKKQI-NYS 200
G T F K L ASD S V+R K A P LD +
Sbjct: 119 ------GPTKQEFHS-FVKILTASDTSTHGGFSVLR-KHATECLP---SLDMTQATPTQE 167
Query: 201 VIAKDVHGVAWKFNFV-DGKSRRHYLTVGWKYFVRQKNLVPGDTVIFIR 248
++ +D+HG W+F + G+ RRH LT GW FV K LV GD +F+R
Sbjct: 168 LVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLR 216
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 259 (96.2 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 77/207 (37%), Positives = 104/207 (50%)
Query: 50 LWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPASVSKAP----PTFDLKPEIICRVADVR 105
LW A AGP ++P++ D V YFPQGH+E AS ++A P +DL +++CRV +V
Sbjct: 62 LWHACAGPLVTVPRQDDRVFYFPQGHIE-QVEASTNQAAEQQMPLYDLPSKLLCRVINVD 120
Query: 106 YLVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFYKKLR 165
TD+VY ++TLLP EN KE + R S F K L
Sbjct: 121 LKAEADTDEVYAQITLLPEANQ-DENAIEKEAP--LPPPPRFQVHS--------FCKTLT 169
Query: 166 ASDQSKKK--IVIRAKDAENVFPFLAHLDYKKQI-NYSVIAKDVHGVAWKFNFV-DGKSR 221
ASD S V+R + A+ P LD +Q ++AKD+H W+F + G+ R
Sbjct: 170 ASDTSTHGGFSVLR-RHADECLP---PLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPR 225
Query: 222 RHYLTVGWKYFVRQKNLVPGDTVIFIR 248
RH L GW FV K LV GD IF+R
Sbjct: 226 RHLLQSGWSVFVSSKRLVAGDAFIFLR 252
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 240 (89.5 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 66/206 (32%), Positives = 98/206 (47%)
Query: 50 LWQAFAGPPPSLPKKGDLVVYFPQGHLEY---SAPASVSKAPPTFDLKPEIICRVADVRY 106
LW+ AGP +PK G+ V YFPQGH+E S +++ P DL ++ CRV +
Sbjct: 28 LWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCRVIAIHL 87
Query: 107 LVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGE-GSTANSTPPLFYKKLR 165
V +D+ Y ++TL+P + +V+ + + + NS F K L
Sbjct: 88 KVENNSDETYAEITLMP------------DTTQVVIPTQNENQFRPLVNS----FTKVLT 131
Query: 166 ASDQSKKK-IVIRAKDAENVFPFLAHLDYKKQIN-YSVIAKDVHGVAWKFNF-VDGKSRR 222
ASD S + K A P LD + + ++A D+HG W+FN G +R
Sbjct: 132 ASDTSAHGGFFVPKKHAIECLP---SLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQR 188
Query: 223 HYLTVGWKYFVRQKNLVPGDTVIFIR 248
H LT GW F K LV GD ++F+R
Sbjct: 189 HLLTTGWNAFTTSKKLVAGDVIVFVR 214
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 239 (89.2 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 64/206 (31%), Positives = 99/206 (48%)
Query: 50 LWQAFAGPPPSLPKKGDLVVYFPQGHLEY---SAPASVSKAPPTFDLKPEIICRVADVRY 106
LW+ AGP +PK G+ V YFPQGH+E S +++ P D ++ CRV ++
Sbjct: 28 LWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVIAIQL 87
Query: 107 LVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGE-GSTANSTPPLFYKKLR 165
V +D+ Y ++TL+P + +V+ + + NS F K L
Sbjct: 88 KVENNSDETYAEITLMP------------DTTQVVIPTQNQNQFRPLVNS----FTKVLT 131
Query: 166 ASDQSKKK-IVIRAKDAENVFPFLAHLDYKKQI-NYSVIAKDVHGVAWKFNFV-DGKSRR 222
ASD S + K A P LD + + ++A D+HG W+F + G ++R
Sbjct: 132 ASDTSVHGGFSVPKKHAIECLP---PLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQR 188
Query: 223 HYLTVGWKYFVRQKNLVPGDTVIFIR 248
H LT+GW F K LV GD ++F+R
Sbjct: 189 HLLTIGWNAFTTSKKLVEGDVIVFVR 214
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 238 (88.8 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 70/209 (33%), Positives = 103/209 (49%)
Query: 47 NLLLWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPA---SVSKAPPTF-DLKPEIICRVA 102
N LW A AGP LP+ G LV YF QGH E A + S + P + +L +++C+V
Sbjct: 52 NSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVH 111
Query: 103 DVRYLVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFYK 162
+V K +D++Y +M+L P+ + F + ++ +K E F K
Sbjct: 112 NVTLHADKDSDEIYAQMSLQPV-HSERDVFPVPDF-GMLRGSKHPTE---------FFCK 160
Query: 163 KLRASDQSKKK-IVIRAKDAENVFPFLAHLDYKKQI-NYSVIAKDVHGVAWKFNFV-DGK 219
L ASD S + + AE +FP LDY Q ++ +D+H W F + G+
Sbjct: 161 TLTASDTSTHGGFSVPRRAAEKLFP---PLDYSAQPPTQELVVRDLHENTWTFRHIYRGQ 217
Query: 220 SRRHYLTVGWKYFVRQKNLVPGDTVIFIR 248
+RH LT GW FV K L GD+V+FIR
Sbjct: 218 PKRHLLTTGWSLFVGSKRLRAGDSVLFIR 246
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 228 (85.3 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 69/210 (32%), Positives = 102/210 (48%)
Query: 50 LWQAFAGPPPSLPKKGDLVVYFPQGHLEY---SAPASVSKAPPTFDLKPEIICRVADVRY 106
LW AGP LPK G+ V YFPQGH+E S + P FDL ++ CRV +
Sbjct: 26 LWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVVAIDR 85
Query: 107 LVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFY---KK 163
V K TD+VY +++L+P + +++ N +T ++ P+ Y K
Sbjct: 86 KVDKNTDEVYAQISLMP------------DTTEVMTHN------TTMDTRRPIVYFFSKI 127
Query: 164 LRASDQSKKK-IVIRAKDAENVFPFLAHLDYKKQIN-YSVIAKDVHGVAWKFNFV-DGKS 220
L ASD S ++I + A FP LD + I+ +++AKD++G W F V G
Sbjct: 128 LTASDVSLSGGLIIPKQYAIECFP---PLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTP 184
Query: 221 RRHYLTVG--WKYFVRQKNLVPGDTVIFIR 248
+RH T G W F K L+ GD + +R
Sbjct: 185 QRHMFTSGGGWSVFATTKRLIVGDIFVLLR 214
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 223 (83.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 63/202 (31%), Positives = 92/202 (45%)
Query: 50 LWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPASVSKAPPTFDLKPEIICRVADVRYLVS 109
+W+A AG +P V YFPQGH+E+ P +S P + P C + ++ L
Sbjct: 20 IWRACAGASVQIPVLHSRVYYFPQGHVEHCCPL-LSTLPSSTSPVP---CIITSIQLLAD 75
Query: 110 KKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFYKKLRASDQ 169
TD+V+ + L P+ + + F + DG+ N F K L SD
Sbjct: 76 PVTDEVFAHLILQPMTQ---QQFTPTNYSRF---GRFDGDVDDNNKVTT-FAKILTPSDA 128
Query: 170 SKKK-IVIRAKDAENVFPFLA-HLDYKKQINYSVIAKDVHGVAWKFNFV-DGKSRRHYLT 226
+ + A++VFP L +D Q Y D+HG W F + G RRH LT
Sbjct: 129 NNGGGFSVPRFCADSVFPLLNFQIDPPVQKLY---VTDIHGAVWDFRHIYRGTPRRHLLT 185
Query: 227 VGWKYFVRQKNLVPGDTVIFIR 248
GW FV K L+ GD+V+F+R
Sbjct: 186 TGWSKFVNSKKLIAGDSVVFMR 207
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 220 (82.5 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 63/206 (30%), Positives = 97/206 (47%)
Query: 50 LWQAFAGPPPSLPKKGDLVVYFPQGHLEY---SAPASVSKAPPTFDLKPEIICRVADVRY 106
LW+ AGP +PK G+ V YFPQG++E S +++ P DL ++ CRV +
Sbjct: 28 LWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVIAIHL 87
Query: 107 LVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGE-GSTANSTPPLFYKKLR 165
V +D++Y ++TL+P + +V+ + + NS F K L
Sbjct: 88 KVENNSDEIYAEITLMP------------DTTQVVIPTQSENRFRPLVNS----FTKVLT 131
Query: 166 ASDQSKKK-IVIRAKDAENVFPFLAHLDYKKQIN-YSVIAKDVHGVAWKFNF-VDGKSRR 222
ASD S + K A P LD + + ++A D+H W+F G +R
Sbjct: 132 ASDTSAYGGFSVPKKHAIECLP---PLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQR 188
Query: 223 HYLTVGWKYFVRQKNLVPGDTVIFIR 248
H LT GW F+ K LV GD ++F+R
Sbjct: 189 HSLTTGWNEFITSKKLVKGDVIVFVR 214
>TAIR|locus:2037169 [details] [associations]
symbol:ARF23 "auxin response factor 23" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
HOGENOM:HOG000241141 EMBL:AC022314 IPI:IPI00526589 PIR:E96503
RefSeq:NP_175062.1 UniGene:At.52022 ProteinModelPortal:Q9LP07
SMR:Q9LP07 EnsemblPlants:AT1G43950.1 GeneID:840994
KEGG:ath:AT1G43950 GeneFarm:3427 TAIR:At1g43950 OMA:PTENENQ
PhylomeDB:Q9LP07 Genevestigator:Q9LP07 GermOnline:AT1G43950
Uniprot:Q9LP07
Length = 222
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 64/205 (31%), Positives = 94/205 (45%)
Query: 50 LWQAFAGPPPSLPKKGDLVVYFPQGHLEY---SAPASVSKAPPTFDLKPEIICRVADVRY 106
LW+ AGP +PK G+ V YFPQGH+E S +++ P DL ++ CRV +
Sbjct: 28 LWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVIAIHL 87
Query: 107 LVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGE-GSTANSTPPLFYKKLR 165
V +D+ Y ++TL+P + +V+ + + + NS F K L
Sbjct: 88 KVENNSDETYVEITLMP------------DTTQVVIPTENENQFRPIVNS----FTKVLT 131
Query: 166 ASDQSKK-KIVIRAKDAENVFPFLAHLDYKKQIN-YSVIAKDVHGVAWKFNFVDGKSRRH 223
ASD S + + + K A P LD + I +IA D+HG W+F R
Sbjct: 132 ASDTSAQGEFSVPCKHAIECLP---PLDMSQPIPAQELIAIDLHGNQWRFKHSYRVPRGD 188
Query: 224 YLTVGWKYFVRQKNLVPGDTVIFIR 248
T GW F K LV GD ++F R
Sbjct: 189 --TTGWNAFTTSKKLVVGDVIVFAR 211
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 185 (70.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 62/202 (30%), Positives = 91/202 (45%)
Query: 50 LWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPASVSKAPPTFDLKPEIICRVADVRYLVS 109
LW+ AGP +PK G+ + YFPQG++E S +LKP IC D+ +
Sbjct: 28 LWKLCAGPLCDIPKLGEKIYYFPQGNIEL---VEASTREELNELKP--IC---DLPSKLQ 79
Query: 110 KKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGE-GSTANSTPPLFYKKLRASD 168
+ + K+ E E + +V+ + + + NS F K L ASD
Sbjct: 80 CRVIAIQLKVENNS-DETYAEITLMPDTTQVVIPTQNENQFRPLVNS----FTKVLTASD 134
Query: 169 QSKKKIVIRAKDAENVFPFLAHLDYKKQI-NYSVIAKDVHGVAWKFNF-VDGKSRRHYLT 226
S V + K A P LD + + ++A D+HG W+FN G +RH LT
Sbjct: 135 TSGGFFVPK-KHAIECLP---PLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLT 190
Query: 227 VGWKYFVRQKNLVPGDTVIFIR 248
GW F K LV GD ++F+R
Sbjct: 191 TGWNAFTTSKKLVAGDVIVFVR 212
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 171 (65.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 61/202 (30%), Positives = 89/202 (44%)
Query: 50 LWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPASVSKAPPTFDLKPEIICRVADVRYLVS 109
LW+ AGP +PK G+ V YFPQG++E S +L+P IC D+ +
Sbjct: 28 LWKLCAGPLCDIPKLGENVYYFPQGNIEL---VDASTREELNELQP--IC---DLPSKLQ 79
Query: 110 KKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGE-GSTANSTPPLFYKKLRASD 168
+ ++ K+ E E + +V+ + + + NS F K L ASD
Sbjct: 80 CRVIAIHLKVENNS-DETYAEITLMPDTTQVVIPTQSENQFRPLVNS----FTKVLTASD 134
Query: 169 QSKKK-IVIRAKDAENVFPFLAHLDYKKQINYSVIAKDVHGVAWKFNF-VDGKSRRHYLT 226
S + K A P L Q ++AKD+HG W+F G +RH LT
Sbjct: 135 TSAYGGFFVPKKHAIECLP---PLPLPAQ---ELLAKDLHGNQWRFRHSYRGTPQRHSLT 188
Query: 227 VGWKYFVRQKNLVPGDTVIFIR 248
GW F K LV GD ++F+R
Sbjct: 189 TGWNEFTTSKKLVKGDVIVFVR 210
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 42/124 (33%), Positives = 60/124 (48%)
Query: 131 NFKGKELQDLVVDN-KRDGEGSTA-NSTPPLFYKKLRASDQSK-KKIVIRAKDAENVFPF 187
N G + L+ DG +T S LF K + SD K ++VI AE FP
Sbjct: 157 NGNGNMTRTLLTSGLSNDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPL 216
Query: 188 -LAHLDYKKQI-NYSVIAKDVHGVAWKFNFVDGKSRRHY-LTVGWKYFVRQKNLVPGDTV 244
+++ K + N+ +DV+G W+F + S + Y LT GW FV++KNL GD V
Sbjct: 217 PSSNVSVKGVLLNF----EDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVV 272
Query: 245 IFIR 248
F R
Sbjct: 273 SFSR 276
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 133 (51.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 43/155 (27%), Positives = 72/155 (46%)
Query: 103 DVRYLVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGEGSTAN-----STP 157
D+ +L + ++ + + + +N K + + + KR+G +T N +
Sbjct: 126 DLAFLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTTQNDKVLKTRE 185
Query: 158 PLFYKKLRASDQSK-KKIVIRAKDAENVFPFLAHLDYKKQINYSVIA--KDVHGVAWKFN 214
LF K + SD K ++VI + AE FP + + V+ +DV+G W+F
Sbjct: 186 VLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSP---SPAVTKGVLINFEDVNGKVWRFR 242
Query: 215 FVDGKSRRHY-LTVGWKYFVRQKNLVPGDTVIFIR 248
+ S + Y LT GW FV++KNL GD V F R
Sbjct: 243 YSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 125 (49.1 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 32/93 (34%), Positives = 47/93 (50%)
Query: 159 LFYKKLRASDQSK-KKIVIRAKDAENVFPFLAHLDYKKQINYSVIAKDVHGVAWKFNFVD 217
LF K L SD K ++VI + AE FP A + + +D G W+F +
Sbjct: 37 LFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 218 GKSRRHY-LTVGWKYFVRQKNLVPGDTVIFIRY 249
S + Y LT GW +V++K+L GD V+F R+
Sbjct: 97 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRH 129
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 122 (48.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 37/100 (37%), Positives = 47/100 (47%)
Query: 159 LFYKKLRASDQSK-KKIVIRAKDAENVFPFLAHLDYKKQINYSVIAK-------DVHGVA 210
LF K L SD K ++VI + AE FP A L + S K D G +
Sbjct: 45 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKS 104
Query: 211 WKFNFVDGKSRRHY-LTVGWKYFVRQKNLVPGDTVIFIRY 249
W+F + S + Y LT GW FV+ K L PGD V F R+
Sbjct: 105 WRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRH 144
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 122 (48.0 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 34/93 (36%), Positives = 49/93 (52%)
Query: 159 LFYKKLRASDQSK-KKIVIRAKDAENVFPFLAHLDYKKQINYSVIA-KDVHGVAWKFNFV 216
+F K L SD K ++VI + AEN FP + N +V+ +D +G W+F +
Sbjct: 35 MFDKVLTPSDVGKLNRLVIPKQHAENFFPL------EDNQNGTVLDFQDKNGKMWRFRYS 88
Query: 217 DGKSRRHY-LTVGWKYFVRQKNLVPGDTVIFIR 248
S + Y +T GW FV++K L GDTV F R
Sbjct: 89 YWNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYR 121
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 113 (44.8 bits), Expect = 0.00041, P = 0.00041
Identities = 31/92 (33%), Positives = 44/92 (47%)
Query: 159 LFYKKLRASDQSK-KKIVIRAKDAENVFPFLAHLDYKKQINYSVIAKDVHGVAWKFNFVD 217
LF K + SD K ++VI AE FP + + +DV+G W+F +
Sbjct: 182 LFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSY 241
Query: 218 GKSRRHY-LTVGWKYFVRQKNLVPGDTVIFIR 248
S + Y LT GW FV++K L GD + F R
Sbjct: 242 WNSSQSYVLTKGWSRFVKEKRLCAGDLISFKR 273
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 112 (44.5 bits), Expect = 0.00062, P = 0.00062
Identities = 36/109 (33%), Positives = 51/109 (46%)
Query: 148 GEGSTANSTPPLFYKKLRASDQSK-KKIVIRAKDAENVFPFLAHLDYKKQINYS------ 200
G + + LF K + SD K ++VI + AE FP A + +N S
Sbjct: 183 GNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPA-MTTAMGMNPSPTKGVL 241
Query: 201 VIAKDVHGVAWKFNFVDGKSRRHY-LTVGWKYFVRQKNLVPGDTVIFIR 248
+ +D G W+F + S + Y LT GW FV++KNL GD V F R
Sbjct: 242 INLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFER 290
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 111 (44.1 bits), Expect = 0.00079, P = 0.00079
Identities = 32/93 (34%), Positives = 48/93 (51%)
Query: 159 LFYKKLRASDQSK-KKIVIRAKDAENVFPFLAHLDYKKQINYSVIA-KDVHGVAWKFNFV 216
+F K + SD K ++VI + AE FP LD N +++ +D +G W+F +
Sbjct: 55 MFDKVVTPSDVGKLNRLVIPKQHAERYFP----LDSSNNQNGTLLNFQDRNGKMWRFRYS 110
Query: 217 DGKSRRHY-LTVGWKYFVRQKNLVPGDTVIFIR 248
S + Y +T GW FV++K L GD V F R
Sbjct: 111 YWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQR 143
>TAIR|locus:2026058 [details] [associations]
symbol:AT1G51120 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC079828
HSSP:Q9ZWM9 KO:K09287 HOGENOM:HOG000090522 ProtClustDB:CLSN2682911
EMBL:AY560883 IPI:IPI00548594 PIR:F96548 RefSeq:NP_175524.1
UniGene:At.50656 ProteinModelPortal:Q9C688 SMR:Q9C688 PRIDE:Q9C688
DNASU:841535 EnsemblPlants:AT1G51120.1 GeneID:841535
KEGG:ath:AT1G51120 TAIR:At1g51120 eggNOG:NOG252474
InParanoid:Q9C688 OMA:EEMKTET PhylomeDB:Q9C688
Genevestigator:Q9C688 Uniprot:Q9C688
Length = 352
Score = 110 (43.8 bits), Expect = 0.0010, P = 0.0010
Identities = 34/107 (31%), Positives = 53/107 (49%)
Query: 149 EGSTANSTPPLFYKKLRASDQSK-KKIVIRAKDAENVFPFLAHLDYKKQINYSVIAKDVH 207
E + S LF K+L SD K ++VI K A PF++ +K+ + V +DV
Sbjct: 167 ESNKCFSCTQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGV--EDVE 224
Query: 208 GV-------AWKFNFVDGKSRRHYL-TVGWKYFVRQKNLVPGDTVIF 246
V WKF + +S + ++ T GW FV++KNL D ++F
Sbjct: 225 VVFYDRAMRQWKFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIVF 271
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.136 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 251 251 0.00081 114 3 11 22 0.49 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 602 (64 KB)
Total size of DFA: 193 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.01u 0.09s 27.10t Elapsed: 00:00:02
Total cpu time: 27.01u 0.09s 27.10t Elapsed: 00:00:02
Start: Mon May 20 23:32:08 2013 End: Mon May 20 23:32:10 2013