BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038801
(662 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224098970|ref|XP_002311339.1| predicted protein [Populus trichocarpa]
gi|222851159|gb|EEE88706.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 1012 bits (2616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/657 (73%), Positives = 564/657 (85%), Gaps = 11/657 (1%)
Query: 9 FMLIRKKFFCSSSSTSPETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNI 68
F L+R++ F ST+PE P+LYSFLQP+IF+LK+ P + T +Q + LTQD+I
Sbjct: 6 FPLLRRRSF----STTPEIPNLYSFLQPTIFALKKTPPSTTNPATTTNRQTPKILTQDHI 61
Query: 69 TSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFAS 128
T+LE+ LHKSL+TNNT+EAW SFKSLT+NS FPSK +TNSLI HLSSL D NLKRAFAS
Sbjct: 62 TNLESTLHKSLITNNTNEAWASFKSLTSNSAFPSKSLTNSLITHLSSLNDTINLKRAFAS 121
Query: 129 VVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDIC 188
+VYVIEKNPK LDF+TV LGSM ANTAAPAFAL+KCMFKNR+FMPF LWG L++I
Sbjct: 122 IVYVIEKNPKSLDFETVQLFLGSMVRANTAAPAFALIKCMFKNRFFMPFRLWGDILIEIS 181
Query: 189 RKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMS 248
RKN +AFLKVFEE CRIA+DE LDFMKP++ ACN ALEGCC L+SVS+AEKVIETMS
Sbjct: 182 RKNDKVIAFLKVFEESCRIAIDEKLDFMKPDMDACNVALEGCCCELESVSEAEKVIETMS 241
Query: 249 VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLE 308
VLG++P+E SFGFLAYLYALKG Q+KI+EL LM+ FGFS++ +F+S LI GYVK G+ E
Sbjct: 242 VLGIKPDELSFGFLAYLYALKGFQDKIIELNGLMSGFGFSNKKLFFSYLIRGYVKSGSFE 301
Query: 309 SASRTILLCL---GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV 365
+ S TIL L GG ++ +FS+ETYC+VVKGF+++G +KGLANLIIEAQKLE + I
Sbjct: 302 AVSETILRSLREQGGLDL---NFSEETYCQVVKGFMKDGGIKGLANLIIEAQKLESATIA 358
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
D+S GFGIISACVNL LSDKAHSI+DEM+A G SVGLGV++P LKAYCKE+RTAEATQL
Sbjct: 359 ADKSTGFGIISACVNLRLSDKAHSIVDEMDAQGGSVGLGVFLPILKAYCKEYRTAEATQL 418
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
VMDIS+ GLQLD G+YDALIEAS+TSQDFQSAF+LFRDMRE I +LKGSYLTIMTGLME
Sbjct: 419 VMDISNKGLQLDEGSYDALIEASMTSQDFQSAFTLFRDMREG-IAELKGSYLTIMTGLME 477
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
RPELMAAFLDE+VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT RRM FLQFEPNDQ
Sbjct: 478 KQRPELMAAFLDEIVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTFRRMTFLQFEPNDQ 537
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAV 605
TYLSLINGYVTAE+YF VLM+W+E+KRK+S D +KGIKF+ +LVDAFLYA+VKGGFFDAV
Sbjct: 538 TYLSLINGYVTAEKYFGVLMLWNEVKRKVSPDKEKGIKFDQSLVDAFLYAMVKGGFFDAV 597
Query: 606 MQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAGLNA 662
MQVVEKSQEMK+FVDKW+YKQAFME+HKKLKV+KLRKRNF+KMEALIAFKNW GLN
Sbjct: 598 MQVVEKSQEMKIFVDKWRYKQAFMESHKKLKVSKLRKRNFRKMEALIAFKNWVGLNT 654
>gi|225423470|ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290
[Vitis vinifera]
Length = 655
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/662 (72%), Positives = 556/662 (83%), Gaps = 7/662 (1%)
Query: 1 MWWRKEASFMLIRKKFFCSSSSTSPETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQ 60
MW R A +++F SS++ E P+LYSFLQPS+FSLK P+ + + Q
Sbjct: 1 MWRRAVAVRFAPQRRF---SSTSESEFPTLYSFLQPSLFSLKPIPSAPRSPHPTSPKPLQ 57
Query: 61 QTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNH 120
+D LE+ LH SL TNNTDEAWKSFK+LT NS FPSK + NSLIAHL+SL D +
Sbjct: 58 SPAPED----LESALHTSLSTNNTDEAWKSFKALTTNSTFPSKSLANSLIAHLASLHDLY 113
Query: 121 NLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELW 180
NLKRAFAS V+++EKNP LLDF TV TLLGSM +ANTAAPAFAL+ CMFKNRYFMPF +W
Sbjct: 114 NLKRAFASAVFLLEKNPSLLDFGTVRTLLGSMNSANTAAPAFALINCMFKNRYFMPFSMW 173
Query: 181 GGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDA 240
GG +V+I R+N +FVAFL+VF E CRIA+DE L+ MKP++ ACN ALEGC L+SVS+A
Sbjct: 174 GGVIVEITRRNRSFVAFLRVFNETCRIAIDEKLESMKPDLDACNVALEGCSQDLESVSEA 233
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
EKV+E MSVLG++P+ESSFGFLAYLYALKGL+EKIVELE LM FGFSS+ V YS LI+
Sbjct: 234 EKVVEMMSVLGIQPDESSFGFLAYLYALKGLEEKIVELEGLMRGFGFSSKKVIYSYLINA 293
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
YVK GNLE SRTI L + + +FS+ETYCEVVKGFLQNG++K LA+LIIE QKLE
Sbjct: 294 YVKSGNLEYVSRTIFRSLREDDEQGPNFSEETYCEVVKGFLQNGSIKDLASLIIETQKLE 353
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
PS I VDRS+G+GIISACV+LG DKAHSILDEMN G SVGLGVYV LKA+CKEHRTA
Sbjct: 354 PSSIAVDRSIGYGIISACVSLGFLDKAHSILDEMNVQGVSVGLGVYVSILKAFCKEHRTA 413
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
EA QLV +ISS GLQLD G+YDALIEAS++SQDFQSAFSLFRDMREAR+ D+KGSYLT+M
Sbjct: 414 EAAQLVTEISSLGLQLDAGSYDALIEASMSSQDFQSAFSLFRDMREARVPDMKGSYLTMM 473
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
TGL ENHRPELMAAFLDE+VEDPRVEV THDWNSIIHAFCK GRLEDA+RT RRMIFLQF
Sbjct: 474 TGLTENHRPELMAAFLDEIVEDPRVEVGTHDWNSIIHAFCKVGRLEDARRTFRRMIFLQF 533
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
EPNDQTYLSLINGY +AE+YFSVLM+W+E+KR+IS DG+KG+KF+HNLVDAFLYALVKGG
Sbjct: 534 EPNDQTYLSLINGYASAEKYFSVLMLWNEVKRRISIDGEKGVKFDHNLVDAFLYALVKGG 593
Query: 601 FFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAGL 660
FFDAVMQVVEKSQEMK+FVDKW+YKQAFME HKKLKVAK+RKRNF+KMEALIAFKNWAGL
Sbjct: 594 FFDAVMQVVEKSQEMKIFVDKWRYKQAFMEVHKKLKVAKVRKRNFRKMEALIAFKNWAGL 653
Query: 661 NA 662
NA
Sbjct: 654 NA 655
>gi|255542030|ref|XP_002512079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549259|gb|EEF50748.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 650
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/663 (71%), Positives = 555/663 (83%), Gaps = 14/663 (2%)
Query: 1 MWWRKEASFMLIRKKFFCSSSSTSPETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQ 60
MW RK +F+ R + T +LYSFLQP+IF+LK+ + + T
Sbjct: 1 MWRRKAINFLPNR----------TFSTSTLYSFLQPTIFTLKKPTTDP---TNTTPPPTL 47
Query: 61 QTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANS-LFPSKPVTNSLIAHLSSLQDN 119
Q+L D++ +LE+ +H SLLTN+TD+AWKSFK LT+NS FPSK + NSLI HLSSLQD
Sbjct: 48 QSLNLDHVATLESTIHNSLLTNDTDQAWKSFKFLTSNSSYFPSKSLANSLITHLSSLQDT 107
Query: 120 HNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFEL 179
NLKRAFASV++ +EKNP+ LDF+TV ++L SM+ AN+AAPAFALVKCMFK+RYFMPF L
Sbjct: 108 LNLKRAFASVIFFMEKNPQSLDFETVQSVLESMKFANSAAPAFALVKCMFKHRYFMPFHL 167
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD 239
WGG + I +KN FVAFLKVFEE RIA+DE LDFMKP++ ACN ALE CC ++SVSD
Sbjct: 168 WGGLIGHISKKNGMFVAFLKVFEESYRIAVDEKLDFMKPDLGACNLALECCCEEIESVSD 227
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A+ VIE MSVLG++P+E SFGFLAYLYALKGLQ++IVEL+SLM F ++ +FYS+LI
Sbjct: 228 ADNVIEIMSVLGIKPDEMSFGFLAYLYALKGLQDRIVELKSLMEGFSVLNKRLFYSNLIR 287
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
GYVK GNLES S TI+ L + + + ++ETYCEVVKGFL++G++KGLANLIIEA+KL
Sbjct: 288 GYVKSGNLESVSATIICSLREEDEKNYNINEETYCEVVKGFLKDGSLKGLANLIIEARKL 347
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
EP I +D+S+ FG+I+ACVNLGLSDKAHSILDEM+A G SVG GVYVP LKAYCKE RT
Sbjct: 348 EPDSIEIDKSISFGVINACVNLGLSDKAHSILDEMDAKGGSVGFGVYVPILKAYCKEGRT 407
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
AEATQLVM+IS+ GLQLD G+YDALIEAS+TSQDFQSAF+LFRDMRE+R DLKGSYLTI
Sbjct: 408 AEATQLVMEISNLGLQLDAGSYDALIEASMTSQDFQSAFTLFRDMRESRSPDLKGSYLTI 467
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
MTGLMENHRPELMAAFLDEVVEDPR+EVKTHDWNSIIHAFCKAGRLEDAKRT RRMIFLQ
Sbjct: 468 MTGLMENHRPELMAAFLDEVVEDPRIEVKTHDWNSIIHAFCKAGRLEDAKRTFRRMIFLQ 527
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKG 599
FEPNDQTYLSLINGYVTAE+YFSVLM+W EIKR++S D +K KF+ NLVDAFLYALVKG
Sbjct: 528 FEPNDQTYLSLINGYVTAEKYFSVLMLWSEIKRRVSNDKEKSFKFDQNLVDAFLYALVKG 587
Query: 600 GFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAG 659
GFFDAVMQVVEKSQEMK+FVDKWKYKQAFME HKKLKV+KLRKRNF+KMEALIAFKNWAG
Sbjct: 588 GFFDAVMQVVEKSQEMKIFVDKWKYKQAFMETHKKLKVSKLRKRNFRKMEALIAFKNWAG 647
Query: 660 LNA 662
LNA
Sbjct: 648 LNA 650
>gi|297738088|emb|CBI27289.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/623 (71%), Positives = 518/623 (83%), Gaps = 7/623 (1%)
Query: 1 MWWRKEASFMLIRKKFFCSSSSTSPETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQ 60
MW R A +++F SS++ E P+LYSFLQPS+FSLK P+ + + Q
Sbjct: 1 MWRRAVAVRFAPQRRF---SSTSESEFPTLYSFLQPSLFSLKPIPSAPRSPHPTSPKPLQ 57
Query: 61 QTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNH 120
+D LE+ LH SL TNNTDEAWKSFK+LT NS FPSK + NSLIAHL+SL D +
Sbjct: 58 SPAPED----LESALHTSLSTNNTDEAWKSFKALTTNSTFPSKSLANSLIAHLASLHDLY 113
Query: 121 NLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELW 180
NLKRAFAS V+++EKNP LLDF TV TLLGSM +ANTAAPAFAL+ CMFKNRYFMPF +W
Sbjct: 114 NLKRAFASAVFLLEKNPSLLDFGTVRTLLGSMNSANTAAPAFALINCMFKNRYFMPFSMW 173
Query: 181 GGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDA 240
GG +V+I R+N +FVAFL+VF E CRIA+DE L+ MKP++ ACN ALEGC L+SVS+A
Sbjct: 174 GGVIVEITRRNRSFVAFLRVFNETCRIAIDEKLESMKPDLDACNVALEGCSQDLESVSEA 233
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
EKV+E MSVLG++P+ESSFGFLAYLYALKGL+EKIVELE LM FGFSS+ V YS LI+
Sbjct: 234 EKVVEMMSVLGIQPDESSFGFLAYLYALKGLEEKIVELEGLMRGFGFSSKKVIYSYLINA 293
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
YVK GNLE SRTI L + + +FS+ETYCEVVKGFLQNG++K LA+LIIE QKLE
Sbjct: 294 YVKSGNLEYVSRTIFRSLREDDEQGPNFSEETYCEVVKGFLQNGSIKDLASLIIETQKLE 353
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
PS I VDRS+G+GIISACV+LG DKAHSILDEMN G SVGLGVYV LKA+CKEHRTA
Sbjct: 354 PSSIAVDRSIGYGIISACVSLGFLDKAHSILDEMNVQGVSVGLGVYVSILKAFCKEHRTA 413
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
EA QLV +ISS GLQLD G+YDALIEAS++SQDFQSAFSLFRDMREAR+ D+KGSYLT+M
Sbjct: 414 EAAQLVTEISSLGLQLDAGSYDALIEASMSSQDFQSAFSLFRDMREARVPDMKGSYLTMM 473
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
TGL ENHRPELMAAFLDE+VEDPRVEV THDWNSIIHAFCK GRLEDA+RT RRMIFLQF
Sbjct: 474 TGLTENHRPELMAAFLDEIVEDPRVEVGTHDWNSIIHAFCKVGRLEDARRTFRRMIFLQF 533
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
EPNDQTYLSLINGY +AE+YFSVLM+W+E+KR+IS DG+KG+KF+HNLVDAFLYALVKGG
Sbjct: 534 EPNDQTYLSLINGYASAEKYFSVLMLWNEVKRRISIDGEKGVKFDHNLVDAFLYALVKGG 593
Query: 601 FFDAVMQVVEKSQEMKVFVDKWK 623
FFDAVMQVVEKSQEMK+FVDKW+
Sbjct: 594 FFDAVMQVVEKSQEMKIFVDKWR 616
>gi|449434724|ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g69290-like [Cucumis sativus]
gi|449517162|ref|XP_004165615.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g69290-like [Cucumis sativus]
Length = 656
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/651 (68%), Positives = 533/651 (81%), Gaps = 15/651 (2%)
Query: 20 SSSTSPETP-SLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQ-------QTLTQDNITSL 71
S S+ PE P SLYSFLQPS+F+ KR P SP+Q Q LT D + +
Sbjct: 13 SFSSVPENPPSLYSFLQPSLFARKRT------PFSPSQDSTDLRQDPTPQNLTPDGVAVV 66
Query: 72 ETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVY 131
ET LHKSLLT++TDEAWKSFK LT +S FPSK +TNSLIAHLSS+ D HNLKRAFASVV+
Sbjct: 67 ETALHKSLLTSDTDEAWKSFKLLTRSSAFPSKSLTNSLIAHLSSIGDVHNLKRAFASVVF 126
Query: 132 VIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKN 191
VIEK P+LLDF +V LL SM+ ANTAAPA +L+KCMFKNR F+PF +WG LVDICR++
Sbjct: 127 VIEKKPELLDFGSVKALLASMKCANTAAPALSLIKCMFKNRCFVPFSVWGKELVDICRQS 186
Query: 192 SNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG 251
+ + FL+VFEE CRIALDE LDF+KP++ ACNAALEGCC+ L+SV+DAEKVIETMS+L
Sbjct: 187 GSLIPFLRVFEENCRIALDERLDFLKPDLIACNAALEGCCHELESVTDAEKVIETMSLLY 246
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
+RP+E SFG LAYLYALKGL +KI+ELE LM FGF+ + +F+S+L+SGYV N + S
Sbjct: 247 LRPDEVSFGALAYLYALKGLDQKIIELEVLMGSFGFTCKDLFFSNLVSGYVNASNFAAVS 306
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
+T+L L F ++TY E+VKGF+Q+GN+K L+ LII+AQ LE S VD S+G
Sbjct: 307 KTMLRSLKDECGSHVHFGEKTYLEMVKGFIQSGNLKELSALIIDAQNLESSS-AVDGSIG 365
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
FGII+ACVN+G DKA ILDEMN+ G S+GLGVY+P LKAY KEHRTA ATQL+MDISS
Sbjct: 366 FGIINACVNIGWLDKAQYILDEMNSQGVSLGLGVYLPILKAYRKEHRTAAATQLIMDISS 425
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
SG+QLD NYDALIEAS+++QDFQSAF+LFR MRE R D K SYLTIMTGLMENHRPEL
Sbjct: 426 SGIQLDAENYDALIEASMSNQDFQSAFTLFRSMRETRKSDTKASYLTIMTGLMENHRPEL 485
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
MAAFLDE+VEDP VEV THDWNSIIHAFCKAGRLEDA+RT RRM FLQFEPN+QT+LSLI
Sbjct: 486 MAAFLDEIVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTYRRMKFLQFEPNEQTFLSLI 545
Query: 552 NGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
NGYV+AE+YF VLM+W+E+K K++ +G+ GIK ++NLVDAFLYALVKGGFFDAVMQVVEK
Sbjct: 546 NGYVSAERYFCVLMLWNELKWKVTPNGESGIKLDNNLVDAFLYALVKGGFFDAVMQVVEK 605
Query: 612 SQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAGLNA 662
+++ K+F+DKWKYKQAFME HKKLKVAKLR+RN+KKME+LIAFKNWAGLNA
Sbjct: 606 TKDTKIFIDKWKYKQAFMETHKKLKVAKLRRRNYKKMESLIAFKNWAGLNA 656
>gi|357487645|ref|XP_003614110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515445|gb|AES97068.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 664
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/650 (69%), Positives = 532/650 (81%), Gaps = 7/650 (1%)
Query: 20 SSSTSPETPSLYSFLQPSIFSLK---RKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLH 76
+ S S ETPSLYSFLQPS+F +P N PT Q +LT +T+L+T LH
Sbjct: 15 TRSFSSETPSLYSFLQPSLFKFNLHNDNDNDNEPHNLPTSPPQSLSLTHQQLTTLQTTLH 74
Query: 77 KSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDN-HNLKRAFASVVYVIEK 135
KSL+T+ TDEAWKSFK+LT + FP KP+TNSL+ HLSSL DN NLKRAFAS +++I+K
Sbjct: 75 KSLITSQTDEAWKSFKTLTTHHSFPPKPLTNSLLTHLSSLPDNILNLKRAFASTLFLIQK 134
Query: 136 NPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFV 195
+P LL+F T+H +L S+++ANTA PAF+LV+ MFK R+F+PF LWGG LVDI R N N
Sbjct: 135 HPNLLEFNTIHAILLSIKSANTAPPAFSLVRSMFKYRFFIPFHLWGGVLVDIARNNDNLA 194
Query: 196 AFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
AFL +FEE CR+A DE L+FM P++ +CNAALE CC+ LQSV+DA +V+E MS LGV+P+
Sbjct: 195 AFLPLFEENCRVAFDEKLEFMIPDVASCNAALEACCFCLQSVTDANRVVEIMSKLGVKPD 254
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFS-SQMVFYSSLISGYVKLGNLESASRTI 314
SFGFLAYLYALKGLQ+KI EL+ LM FG+S + FYS+LISGYVK NL S TI
Sbjct: 255 VFSFGFLAYLYALKGLQDKIDELKVLMVGFGYSKNNKCFYSNLISGYVKSANLVSVESTI 314
Query: 315 LLCLGGGNMEQS--DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
L L + E F ++T+C VVK +L GN+KGLANLIIEAQKLE S I VD S+GF
Sbjct: 315 LSSLNDRDDEGEVWSFDRDTFCLVVKEYLHKGNIKGLANLIIEAQKLESSNIKVDESIGF 374
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
GI++ACV++GLSDKAH+ILDEMNA G SVGLGVYVP LKAYCKE+RTAEA+ LV +ISSS
Sbjct: 375 GIVNACVSIGLSDKAHNILDEMNALGGSVGLGVYVPILKAYCKENRTAEASLLVTEISSS 434
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GL+LDV YDALIE S++ QDFQS FSLFRDMR AR+ DLKGSYLTIMTGLMENHRPELM
Sbjct: 435 GLKLDVETYDALIETSMSGQDFQSVFSLFRDMRGARVLDLKGSYLTIMTGLMENHRPELM 494
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
AAFLDEVVEDPR+EV THDWNSIIHAFCKAGRLEDA+RT RRM FLQFEPNDQTYLSLIN
Sbjct: 495 AAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLIN 554
Query: 553 GYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
GYV+AE+YF V+M+W+E+KRK++ DG KGIKF+ NLVDAFLYA+VKGGFFDAVMQVVEKS
Sbjct: 555 GYVSAEKYFDVMMLWNEVKRKLAGDGPKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEKS 614
Query: 613 QEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAGLNA 662
+EMK+FVDKW+YKQAFME HKKLKVA+LRK+N +KMEALIAFKNWAGLNA
Sbjct: 615 KEMKIFVDKWRYKQAFMETHKKLKVARLRKKNVRKMEALIAFKNWAGLNA 664
>gi|357487751|ref|XP_003614163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515498|gb|AES97121.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 660
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/649 (69%), Positives = 530/649 (81%), Gaps = 9/649 (1%)
Query: 20 SSSTSPETPSLYSFLQPSIF--SLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHK 77
+ S S ETPSLYSFLQPS+F +L + + P SP Q T+L+T LHK
Sbjct: 15 TRSFSSETPSLYSFLQPSLFKFNLHNDNDNDNLPTSPPQSLSLTHQQL---TTLQTTLHK 71
Query: 78 SLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDN-HNLKRAFASVVYVIEKN 136
SL+T+ TDEAWKSFK+LT + FP KP+TNSL+ HLSSL DN NLKRAFAS +++I+K+
Sbjct: 72 SLITSQTDEAWKSFKTLTTHHSFPPKPLTNSLLTHLSSLPDNILNLKRAFASTLFLIQKH 131
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVA 196
P LL+F T+H +L S+++ANTA PAF+LV+ MFK R+F+PF LWGG LVDI R N N A
Sbjct: 132 PNLLEFNTIHAILLSIKSANTAPPAFSLVRSMFKYRFFIPFHLWGGVLVDIARNNDNLAA 191
Query: 197 FLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
FL +FEE CR+A DE L+FM P++ +CNAALE CC+ LQSV+DA +V+E MS LGV+P+
Sbjct: 192 FLPLFEENCRVAFDEKLEFMIPDVASCNAALEACCFCLQSVTDANRVVEIMSKLGVKPDV 251
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFS-SQMVFYSSLISGYVKLGNLESASRTIL 315
SFGFLAYLYALKGLQ+KI EL+ LM FG+S + FYS+LISGYVK NL S TIL
Sbjct: 252 FSFGFLAYLYALKGLQDKIDELKVLMVGFGYSKNNKCFYSNLISGYVKSANLVSVESTIL 311
Query: 316 LCLGGGNMEQS--DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG 373
L + E F ++T+C VVK +L GN+KGLANLIIEAQKLE S I VD S+GFG
Sbjct: 312 SSLNDRDDEGEVWSFDRDTFCLVVKEYLHKGNIKGLANLIIEAQKLESSNIKVDESIGFG 371
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
I++ACV++GLSDKAHSILDEMNA G SVGLGVYVP LKAYCKE+RTAEA+ LV +ISSSG
Sbjct: 372 IVNACVSIGLSDKAHSILDEMNALGGSVGLGVYVPILKAYCKENRTAEASLLVTEISSSG 431
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
L+LDV YDALIE S++ QDFQS FSLFRDMR AR+ DLKGSYLTIMTGLMENHRPELMA
Sbjct: 432 LKLDVETYDALIETSMSGQDFQSVFSLFRDMRGARVLDLKGSYLTIMTGLMENHRPELMA 491
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
AFLDEVVEDPR+EV THDWNSIIHAFCKAGRLEDA+RT RRM FLQFEPNDQTYLSLING
Sbjct: 492 AFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLING 551
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
YV+AE+YF V+M+W+E+KRK++ DG KGIKF+ NLVDAFLYA+VKGGFFDAVMQVVEKS+
Sbjct: 552 YVSAEKYFDVMMLWNEVKRKLAGDGPKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEKSK 611
Query: 614 EMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAGLNA 662
EMK+FVDKW+YKQAFME HKKLKVA+LRK+N +KMEALIAFKNWAGLNA
Sbjct: 612 EMKIFVDKWRYKQAFMETHKKLKVARLRKKNVRKMEALIAFKNWAGLNA 660
>gi|297841661|ref|XP_002888712.1| hypothetical protein ARALYDRAFT_339164 [Arabidopsis lyrata subsp.
lyrata]
gi|297334553|gb|EFH64971.1| hypothetical protein ARALYDRAFT_339164 [Arabidopsis lyrata subsp.
lyrata]
Length = 1042
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/636 (68%), Positives = 527/636 (82%), Gaps = 12/636 (1%)
Query: 30 LYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWK 89
LYSFL+PS+FS K +L P SP Q + TLTQ+ +S E+ LH SL T+NTDEAWK
Sbjct: 24 LYSFLKPSLFSNKPITLT--PSLSPPQNLK--TLTQEQKSSFESTLHDSLTTHNTDEAWK 79
Query: 90 SFKSLTANSLFPSKPVTNSLIAHLSSLQDN-----HNLKRAFASVVYVIEKNPKLLDFQT 144
+F+SLTA S P K + NSLI HLS+ +++ H LKRAFAS YVI+K+P LL+F+T
Sbjct: 80 AFRSLTAASSLPEKRLINSLITHLSNTEESGENTAHRLKRAFASAAYVIQKDPILLEFET 139
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
V TL+ SM+ A A PA ALVKCMFKNRYF+PF+LWG ++DICR+N + AFLKVF+E
Sbjct: 140 VRTLMESMKLAKAAGPALALVKCMFKNRYFVPFDLWGHLIIDICRENGSLAAFLKVFKES 199
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
CRIA+DE LDFMKP++ A NAALE CC L+S++DA+ VIE+M+VLGV+P+E SFGFLAY
Sbjct: 200 CRIAVDEKLDFMKPDLVASNAALEACCRQLESLADADNVIESMAVLGVKPDELSFGFLAY 259
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
LYA KGL+EKI ELE+LM+ FGF+S+ + YS++ISGYVK G+L++ S IL L G E
Sbjct: 260 LYARKGLREKISELENLMDGFGFASRRILYSNMISGYVKSGDLDNVSDVILHSLKGDGKE 319
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
S F +ETYCE+VKGF+++ +VKGLA +IIEAQKLE S I D SVGFGII+ACVNLG S
Sbjct: 320 -SGFGEETYCELVKGFIESKSVKGLAKVIIEAQKLESSSIDADSSVGFGIINACVNLGFS 378
Query: 385 DKAHSILDEMNA-CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
DKAHSIL+EM A G SVG+G YVP LKAYCKE+RTAEATQLV +I+SSGLQLDV Y+A
Sbjct: 379 DKAHSILEEMIAQGGGSVGIGAYVPILKAYCKEYRTAEATQLVTEINSSGLQLDVEIYNA 438
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LIEAS+T+QDF SAF+LFRDMRE R+ DLKGSYLTIMTGL+EN RPELMAAFLDEVVEDP
Sbjct: 439 LIEASMTNQDFISAFTLFRDMRETRVGDLKGSYLTIMTGLLENQRPELMAAFLDEVVEDP 498
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
RVEV +HDWNSIIHAFCK+GRLEDA+RT RRM+FL++EPN+QTYLSLINGYV+ E+YF+V
Sbjct: 499 RVEVNSHDWNSIIHAFCKSGRLEDARRTFRRMVFLRYEPNNQTYLSLINGYVSGEKYFNV 558
Query: 564 LMMWHEIKRKIST-DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKW 622
L++W+EIK KIS+ + +K K +H LVDAFLYALVKGGFFDA MQVVEKSQEMK+FVDKW
Sbjct: 559 LLLWNEIKGKISSMEAEKRSKLDHALVDAFLYALVKGGFFDAAMQVVEKSQEMKIFVDKW 618
Query: 623 KYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWA 658
+YKQAFME HKKL++ KLRKRN+KKME+L+AFKNWA
Sbjct: 619 RYKQAFMETHKKLRLPKLRKRNYKKMESLVAFKNWA 654
>gi|30697827|ref|NP_177089.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806277|sp|P0C7R4.1|PP110_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g69290
gi|332196785|gb|AEE34906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 658
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/639 (67%), Positives = 525/639 (82%), Gaps = 12/639 (1%)
Query: 30 LYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWK 89
LYSFL+PS+FS K + P SP Q + TLT D +S E+ LH SL + TDEAWK
Sbjct: 24 LYSFLKPSLFS--HKPITLSPSLSPPQNPK--TLTPDQKSSFESTLHDSLNAHYTDEAWK 79
Query: 90 SFKSLTANSLFPSKPVTNSLIAHLSSLQDN-----HNLKRAFASVVYVIEKNPKLLDFQT 144
+F+SLTA S P K + NSLI HLS ++ + H LKRAFAS YVIEK+P LL+F+T
Sbjct: 80 AFRSLTAASSLPEKRLINSLITHLSGVEGSGESISHRLKRAFASAAYVIEKDPILLEFET 139
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
V TLL SM+ A A PA ALVKCMFKNRYF+PF+LWG ++DICR+N + FLKVF+E
Sbjct: 140 VRTLLESMKLAKAAGPALALVKCMFKNRYFVPFDLWGHLVIDICRENGSLAPFLKVFKES 199
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
CRI++DE L+FMKP++ A NAALE CC ++S++DAE VIE+M+VLGV+P+E SFGFLAY
Sbjct: 200 CRISVDEKLEFMKPDLVASNAALEACCRQMESLADAENVIESMAVLGVKPDELSFGFLAY 259
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
LYA KGL+EKI ELE+LM+ FGF+S+ + YS++ISGYVK G+L+S S IL L G E
Sbjct: 260 LYARKGLREKISELENLMDGFGFASRRILYSNMISGYVKSGDLDSVSDVILHSLKEGG-E 318
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
+S FS ETYCE+VKGF+++ +VK LA +I+EAQKLE S + VD SVGFGII+ACVNLG S
Sbjct: 319 ESSFSVETYCELVKGFIESKSVKSLAKVILEAQKLESSYVGVDSSVGFGIINACVNLGFS 378
Query: 385 DKAHSILDEMNA-CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
DKAHSIL+EM A G SVG+GVYVP LKAYCKE+RTAEATQLV +ISSSGLQLDV +A
Sbjct: 379 DKAHSILEEMIAQGGGSVGIGVYVPILKAYCKEYRTAEATQLVTEISSSGLQLDVEISNA 438
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LIEAS+T+QDF SAF+LFRDMRE R+ DLKGSYLTIMTGL+EN RPELMAAFLDEVVEDP
Sbjct: 439 LIEASMTNQDFISAFTLFRDMRENRVVDLKGSYLTIMTGLLENQRPELMAAFLDEVVEDP 498
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
RVEV +HDWNSIIHAFCK+GRLEDA+RT RRM+FL++EPN+QTYLSLINGYV+ E+YF+V
Sbjct: 499 RVEVNSHDWNSIIHAFCKSGRLEDARRTFRRMVFLRYEPNNQTYLSLINGYVSGEKYFNV 558
Query: 564 LMMWHEIKRKIST-DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKW 622
L++W+EIK KIS+ + +K + +H LVDAFLYALVKGGFFDA MQVVEKSQEMK+FVDKW
Sbjct: 559 LLLWNEIKGKISSVEAEKRSRLDHALVDAFLYALVKGGFFDAAMQVVEKSQEMKIFVDKW 618
Query: 623 KYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAGLN 661
+YKQAFME HKKL++ KLRKRN+KKME+L+AFKNWAGLN
Sbjct: 619 RYKQAFMETHKKLRLPKLRKRNYKKMESLVAFKNWAGLN 657
>gi|12325092|gb|AAG52501.1|AC018364_19 unknown protein; 45065-49536 [Arabidopsis thaliana]
Length = 860
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/641 (67%), Positives = 526/641 (82%), Gaps = 16/641 (2%)
Query: 30 LYSFLQPSIFSLKRKSLQQD--PPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEA 87
LYSFL+PS+FS K +L PP +P +TLT D +S E+ LH SL + TDEA
Sbjct: 226 LYSFLKPSLFSHKPITLSPSLSPPQNP------KTLTPDQKSSFESTLHDSLNAHYTDEA 279
Query: 88 WKSFKSLTANSLFPSKPVTNSLIAHLSSLQDN-----HNLKRAFASVVYVIEKNPKLLDF 142
WK+F+SLTA S P K + NSLI HLS ++ + H LKRAFAS YVIEK+P LL+F
Sbjct: 280 WKAFRSLTAASSLPEKRLINSLITHLSGVEGSGESISHRLKRAFASAAYVIEKDPILLEF 339
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE 202
+TV TLL SM+ A A PA ALVKCMFKNRYF+PF+LWG ++DICR+N + FLKVF+
Sbjct: 340 ETVRTLLESMKLAKAAGPALALVKCMFKNRYFVPFDLWGHLVIDICRENGSLAPFLKVFK 399
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
E CRI++DE L+FMKP++ A NAALE CC ++S++DAE VIE+M+VLGV+P+E SFGFL
Sbjct: 400 ESCRISVDEKLEFMKPDLVASNAALEACCRQMESLADAENVIESMAVLGVKPDELSFGFL 459
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
AYLYA KGL+EKI ELE+LM+ FGF+S+ + YS++ISGYVK G+L+S S IL L G
Sbjct: 460 AYLYARKGLREKISELENLMDGFGFASRRILYSNMISGYVKSGDLDSVSDVILHSLKEGG 519
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
E+S FS ETYCE+VKGF+++ +VK LA +I+EAQKLE S + VD SVGFGII+ACVNLG
Sbjct: 520 -EESSFSVETYCELVKGFIESKSVKSLAKVILEAQKLESSYVGVDSSVGFGIINACVNLG 578
Query: 383 LSDKAHSILDEMNA-CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
SDKAHSIL+EM A G SVG+GVYVP LKAYCKE+RTAEATQLV +ISSSGLQLDV
Sbjct: 579 FSDKAHSILEEMIAQGGGSVGIGVYVPILKAYCKEYRTAEATQLVTEISSSGLQLDVEIS 638
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ALIEAS+T+QDF SAF+LFRDMRE R+ DLKGSYLTIMTGL+EN RPELMAAFLDEVVE
Sbjct: 639 NALIEASMTNQDFISAFTLFRDMRENRVVDLKGSYLTIMTGLLENQRPELMAAFLDEVVE 698
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
DPRVEV +HDWNSIIHAFCK+GRLEDA+RT RRM+FL++EPN+QTYLSLINGYV+ E+YF
Sbjct: 699 DPRVEVNSHDWNSIIHAFCKSGRLEDARRTFRRMVFLRYEPNNQTYLSLINGYVSGEKYF 758
Query: 562 SVLMMWHEIKRKIST-DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
+VL++W+EIK KIS+ + +K + +H LVDAFLYALVKGGFFDA MQVVEKSQEMK+FVD
Sbjct: 759 NVLLLWNEIKGKISSVEAEKRSRLDHALVDAFLYALVKGGFFDAAMQVVEKSQEMKIFVD 818
Query: 621 KWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAGLN 661
KW+YKQAFME HKKL++ KLRKRN+KKME+L+AFKNWAGLN
Sbjct: 819 KWRYKQAFMETHKKLRLPKLRKRNYKKMESLVAFKNWAGLN 859
>gi|356502616|ref|XP_003520114.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g69290-like [Glycine max]
Length = 624
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/659 (66%), Positives = 522/659 (79%), Gaps = 38/659 (5%)
Query: 5 KEASFMLIRKKFFCSSSSTSPETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLT 64
K+A F L+ + F SS++ ETP+LYSFLQPS+F+L +K Q PNS + L+
Sbjct: 3 KKAVFFLLPHRAFSSSTT---ETPTLYSFLQPSVFALTKK---QHQPNSEPSPKSPTLLS 56
Query: 65 QDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKR 124
+++L+T L SL +NTDEAWKSFK+LT + FP K +TNSL+ HLSSL D NLKR
Sbjct: 57 SSQLSTLQTTLQNSLTRSNTDEAWKSFKTLTTHHSFPPKTLTNSLLIHLSSLGDTLNLKR 116
Query: 125 AFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFL 184
AFAS ++++EKNP L+D T+H +L SMR+ANTAAPAFALV+CMF+NR F+PF +WG L
Sbjct: 117 AFASTLFLMEKNPMLIDHHTLHQILLSMRDANTAAPAFALVRCMFRNRLFVPFHVWGPVL 176
Query: 185 VDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVI 244
V+I RKN+ L G L+SVSDAE+V+
Sbjct: 177 VEISRKNNG-------------------------------GGLGGAFLRLESVSDAERVV 205
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
TMS LG+RP+E SFGFL YLYALKGL+EKI ELE LM FG ++ FY SLISGY+K
Sbjct: 206 GTMSNLGIRPDEFSFGFLGYLYALKGLEEKIRELEVLMGGFGCLNKKWFYCSLISGYIKS 265
Query: 305 GNLESASRTILLCLGGGNMEQSDFSK-ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
G+L S T++ CLG G + ET+CEVVK + Q GN+KGLA+LI+EAQKLE S
Sbjct: 266 GDLASVEATVVKCLGDGGGGKDWGFGVETFCEVVKAYFQKGNIKGLASLIVEAQKLEGSD 325
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
I++D+S+G+GI++ACVN+GLSDKAHSILDEMNA G SVGLGVY+P LKAYCKE+RTAEAT
Sbjct: 326 IMIDKSIGYGIVNACVNIGLSDKAHSILDEMNALGASVGLGVYIPILKAYCKENRTAEAT 385
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
Q+VM+IS+SGLQLDVG YDAL+EA++ +QDFQSAFSLFRDMR+ARI DLKGSYLTIMTGL
Sbjct: 386 QMVMEISNSGLQLDVGTYDALVEAAMCAQDFQSAFSLFRDMRDARIPDLKGSYLTIMTGL 445
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
MENHRPELMAAFLDEVVEDPR+EV THDWNSIIHAFCKAGRLEDA+RT RRM+FLQFEPN
Sbjct: 446 MENHRPELMAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMMFLQFEPN 505
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFD 603
DQTYLS+INGYV AE+YF VLM+W+E+KRK+S DGQKGIKF+HNLVDAFLYA+VKGGFFD
Sbjct: 506 DQTYLSMINGYVLAEKYFLVLMLWNEVKRKLSLDGQKGIKFDHNLVDAFLYAMVKGGFFD 565
Query: 604 AVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAGLNA 662
AVMQVVEK+ EM+VFVDKW+YKQAFME HKKLKVAKLRKRNF+KMEALIAFKNWAGLNA
Sbjct: 566 AVMQVVEKAYEMRVFVDKWRYKQAFMETHKKLKVAKLRKRNFRKMEALIAFKNWAGLNA 624
>gi|15221572|ref|NP_177062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333630|sp|Q9CAA5.1|PP109_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g68980, mitochondrial; Flags: Precursor
gi|12323218|gb|AAG51590.1|AC011665_11 unknown protein [Arabidopsis thaliana]
gi|110740675|dbj|BAE98440.1| hypothetical protein [Arabidopsis thaliana]
gi|332196751|gb|AEE34872.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/626 (61%), Positives = 468/626 (74%), Gaps = 17/626 (2%)
Query: 43 RKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPS 102
RK+L P +TLT +S E+ LH SL+T++TD+AWK F+S A S P
Sbjct: 3 RKTLTLISLRRPFSSIPSKTLTPHQKSSFESTLHHSLITHDTDQAWKVFRSFAAASSLPD 62
Query: 103 KPVTNSLIAHLSSLQDN-------HNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNA 155
K + NSLI HLSS + H LKRAF S YVIEK+P LL+F+TV T+L SM+ A
Sbjct: 63 KRLLNSLITHLSSFHNTDQNTSLRHRLKRAFVSTTYVIEKDPILLEFETVRTVLESMKLA 122
Query: 156 NTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDF 215
+ PA ALV+CMFKNRYF+PF+LWG L+D+CR+N + AFLKVF E CRIA+DE LDF
Sbjct: 123 KASGPALALVECMFKNRYFVPFDLWGDLLIDVCRENGSLAAFLKVFRESCRIAVDEKLDF 182
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
MKP++ A NAALE CC ++S++DAE +IE+M VLGV+P+E SFGFLAYLYA KGL+EKI
Sbjct: 183 MKPDLVASNAALEACCRQMESLADAENLIESMDVLGVKPDELSFGFLAYLYARKGLREKI 242
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
ELE LM+ GF+S+ + YSS+ISGYVK G+L+SAS IL L G E S FS+ETYCE
Sbjct: 243 SELEDLMDGLGFASRRILYSSMISGYVKSGDLDSASDVILCSLKGVG-EASSFSEETYCE 301
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+V+GF+++ +V+ LA LIIEAQKLE V SVGFGI++ACV LG S K SILDE+N
Sbjct: 302 LVRGFIESKSVESLAKLIIEAQKLESMSTDVGGSVGFGIVNACVKLGFSGK--SILDELN 359
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A G S G+GVYVP LKAYCKE RT+EATQLV +ISSSGLQLDV Y+ +IEAS+T DF
Sbjct: 360 AQGGSGGIGVYVPILKAYCKEGRTSEATQLVTEISSSGLQLDVETYNTMIEASMTKHDFL 419
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
SA +LFRDMRE R+ DLK YLTIMTGL+EN RPELMA F++EV+EDPRVEVK+HDWNSI
Sbjct: 420 SALTLFRDMRETRVADLKRCYLTIMTGLLENQRPELMAEFVEEVMEDPRVEVKSHDWNSI 479
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
IHAFCK+GRL DAK T RRM FLQ+EPN+QTYLSLINGYV+ E+YF V+++W E K
Sbjct: 480 IHAFCKSGRLGDAKSTFRRMTFLQYEPNNQTYLSLINGYVSCEKYFEVVVIWKEFK---- 535
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKL 635
K K EH L DAFL ALVKGGFF +QV+EK QEMK+FVDKW+YK FME K L
Sbjct: 536 ---DKKAKLEHALADAFLNALVKGGFFGTALQVIEKCQEMKIFVDKWRYKATFMETQKNL 592
Query: 636 KVAKLRKRNFKKMEALIAFKNWAGLN 661
++ KLRKR KK+E L AFKNWA +
Sbjct: 593 RLPKLRKRKMKKIEFLDAFKNWARIT 618
>gi|297838671|ref|XP_002887217.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333058|gb|EFH63476.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/632 (61%), Positives = 477/632 (75%), Gaps = 23/632 (3%)
Query: 37 SIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTA 96
++ SL+R P +S +++ +TLT +S E+ LH SL+T++TD+AWK F+S A
Sbjct: 7 TLISLRR------PFSSISRKPSPKTLTPHQKSSFESTLHHSLITHDTDQAWKVFRSFAA 60
Query: 97 NSLFPSKPVTNSLIAHLSSLQD-------NHNLKRAFASVVYVIEKNPKLLDFQTVHTLL 149
S P K + NSLI HLSSL H LKRAF S YVIEK+P LL+F+T+ T+L
Sbjct: 61 ASSLPDKRLLNSLITHLSSLHHADQNTSLRHRLKRAFVSTTYVIEKDPILLEFETIRTVL 120
Query: 150 GSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIAL 209
SM+ A T+ PA ALV+CMFKNRYF+PF+LWG ++DIC + + AFLKVF E CRIA+
Sbjct: 121 ESMKLAKTSGPALALVECMFKNRYFVPFDLWGRLIIDICSETGSLAAFLKVFRESCRIAV 180
Query: 210 DENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALK 269
E LDFMKP++ A NAALE CC+ L+S++DAE VIE+M+VLGV+P+ESSFGFLAYLYA K
Sbjct: 181 YEKLDFMKPDLVASNAALEACCWQLESLADAEDVIESMAVLGVKPDESSFGFLAYLYARK 240
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
GL+EKI E+E+ M+ FGF S+ + YS++ISGYVK G+L+S S IL L G E S F
Sbjct: 241 GLREKISEIENSMDGFGFVSRRILYSNVISGYVKSGDLDSVSDVILHSLKRGG-EDSSFR 299
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
+ETYCE+VKGF+++ +VK LA LIIEAQKLE I V+ SVGFGI++ACV LG S K S
Sbjct: 300 EETYCELVKGFIESKSVKCLAKLIIEAQKLESLSIDVNGSVGFGIVNACVKLGFSGK--S 357
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
ILDEMNA G S G+GVYVP LKAYCKE TAEATQLV +ISSSGLQLDV Y+ +IE S+
Sbjct: 358 ILDEMNAQGGSGGIGVYVPILKAYCKEGGTAEATQLVTEISSSGLQLDVETYNTMIEFSM 417
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
T QDF SA +LF+DMRE ++ DLK YLTIMTGL+EN RP+LMA F++EVVEDPRVEVK+
Sbjct: 418 TKQDFLSALTLFKDMRETKVSDLKRCYLTIMTGLLENQRPDLMAEFVEEVVEDPRVEVKS 477
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
HDWNSIIHAFCK+GRLEDAK T RRM FLQ+EPN+QTYLSLINGYV+ E+YF V+++W E
Sbjct: 478 HDWNSIIHAFCKSGRLEDAKSTFRRMAFLQYEPNNQTYLSLINGYVSCEKYFEVVVLWKE 537
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFM 629
K K K EH L DAFL ALVKGGFF +QV+EK QEMK+FVDKW+YK FM
Sbjct: 538 FK-------DKKAKLEHALADAFLNALVKGGFFGTALQVIEKCQEMKIFVDKWRYKATFM 590
Query: 630 ENHKKLKVAKLRKRNFKKMEALIAFKNWAGLN 661
E K L++ KLRKR KKME L AFKNWAGL
Sbjct: 591 ETQKNLRLPKLRKRKMKKMEFLDAFKNWAGLT 622
>gi|357125396|ref|XP_003564380.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g69290-like [Brachypodium distachyon]
Length = 668
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/654 (54%), Positives = 474/654 (72%), Gaps = 19/654 (2%)
Query: 20 SSSTSPETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSL 79
SSS + E P++YSFLQPSIF+ + K PP + L + +LE + ++
Sbjct: 23 SSSGTDEIPTVYSFLQPSIFARRPKPQPPPPPPPAPNPPTPKALPVADAVALEEGIFAAV 82
Query: 80 LTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL 139
+ +D+AW +FKSL A SL PS P +L++HL + LKRAFA+VV+++EK+P
Sbjct: 83 AEDRSDDAWLAFKSLAAASLSPSPPAAAALVSHLVAENHRLGLKRAFAAVVFLLEKSPHA 142
Query: 140 --LDFQTVHTLLGSMRNANTAAPAFALVKCMFK-NRYFMPFELWGGFLVDICRKNSN-FV 195
L + TL S+ A + APA AL + + + R F WG L+D+ R +++ F
Sbjct: 143 SPLPEAALETLFCSLVTAGSTAPALALARALIRCGRRLPAFSAWGRQLIDLTRTDTDSFA 202
Query: 196 AFLKVFEECCRIALDEN----LDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG 251
A LKVF+E CR+ ++E + M+P++ ACNA L+GCC L S++DAE+V+E MS +G
Sbjct: 203 ALLKVFDEACRLMVEEKSPSVIAVMRPDLAACNAVLDGCCRRLGSITDAERVLEIMSAIG 262
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
V P+ SFG LA+LYA + + ++ EL+ L+ GFS + +F+ +L+SGY+K + ES S
Sbjct: 263 VSPDVESFGCLAFLYAWRDVPSRVDELDKLLEALGFSKK-IFFKNLVSGYLKCCSFESVS 321
Query: 312 RTILLCLGGGNMEQSD-FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS--GIVVDR 368
IL L + + F E Y EV + F+ NG +K LA LII+AQ++E + +VVD
Sbjct: 322 SIILRTLKERRVRDGNAFDDECYTEVAQCFVDNGRIKELAQLIIQAQEIELTQQSLVVDD 381
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
SVGFGI++ACV LGL KAHSILDEM A G SVGLG+Y P LKAYCKE +TAEA QLV +
Sbjct: 382 SVGFGIVNACVGLGLLSKAHSILDEMTAQGASVGLGIYSPILKAYCKEQKTAEAAQLVAE 441
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
I+++GLQLD G+YDALI+AS+T+ DFQSAF+LF+DMREAR+ +L+ SYLTIMTGL EN+R
Sbjct: 442 ITAAGLQLDAGSYDALIDASMTAHDFQSAFTLFKDMREARVPNLRTSYLTIMTGLTENNR 501
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
PELMA+FLD VV+DPR+E+ THDWNSIIHAFCK GRLEDA+RT RRM+FL FEPN+QTYL
Sbjct: 502 PELMASFLDSVVDDPRIEIATHDWNSIIHAFCKVGRLEDARRTYRRMVFLIFEPNNQTYL 561
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQV 608
SLINGY++AE+YF+VL++W E++R KG F H L+DAFLYALVKGGFFD MQV
Sbjct: 562 SLINGYLSAEKYFNVLILWTEVRR-------KGANFNHELIDAFLYALVKGGFFDMAMQV 614
Query: 609 VEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAGLNA 662
+EK+QE+K+FVDKW++KQAFME HKKLKVAKLRKRNF+KMEALIAFKNWAGLN+
Sbjct: 615 IEKAQELKIFVDKWRHKQAFMETHKKLKVAKLRKRNFRKMEALIAFKNWAGLNS 668
>gi|414880174|tpg|DAA57305.1| TPA: hypothetical protein ZEAMMB73_061992 [Zea mays]
Length = 680
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/660 (52%), Positives = 469/660 (71%), Gaps = 39/660 (5%)
Query: 26 ETPSLYSFLQPSIFSLKRKSL-----------QQDPPNSPTQQQQQQTLTQDNITSLETN 74
E P++YSFLQPSIF+ + +S DP +++TL + +LE++
Sbjct: 35 EIPTIYSFLQPSIFAPRPRSQPPQPPPPPPPGAHDP-------ARRKTLPVADAAALESD 87
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNH--NLKRAFASVVYV 132
L ++ +D+AW +FKSL A S PS +L++HL++ H LKRAFA+ V++
Sbjct: 88 LLAAVSEGRSDDAWLAFKSLAAASCSPSPHAAAALVSHLAAAAGQHRLGLKRAFAAAVFL 147
Query: 133 IEKNPKLLDFQ--TVHTLLGSMRNANTAAPAFALVKCMFK-NRYFMPFELWGGFLVDICR 189
+EK+P + L + A +AAPA AL + M + R F +WG L+++ R
Sbjct: 148 LEKSPHAAPVPEPALEALFSAFVAAGSAAPAVALARAMLRCGRRLPAFSVWGHPLIELTR 207
Query: 190 KNSN-FVAFLKVFEECCRIALDEN----LDFMKPNIYACNAALEGCCYGLQSVSDAEKVI 244
+ F AFL +F+E C++ ++E M+P+ ACN+ L GCC GL S++DAE+V+
Sbjct: 208 TDPGAFAAFLTLFDEACKLVVEEKSPAEAAAMRPDRAACNSVLSGCCRGLGSLADAERVL 267
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
ETMS +GV P+ SFG LA+LYA +G+ ++ EL++L + GFS + F+ +L+SGY+K
Sbjct: 268 ETMSAVGVSPDVESFGCLAFLYAWRGVPSRVDELDTLFDALGFSKKG-FFKNLVSGYLKS 326
Query: 305 GNLESASRTILLCLGGGNM-EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS- 362
G+ ES S IL + + + + +ETY EV + F+ ++ LA LII+A ++E +
Sbjct: 327 GDFESVSPIILRAVKDRRVGDDNGLDEETYTEVAQCFVDRARIRELAQLIIQAHEIELAQ 386
Query: 363 -GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
I V+ SVGFGI++ACV LGL +KAHSILDEM A G SVGLGVY LKAYCKE +TAE
Sbjct: 387 QSISVEDSVGFGIVNACVELGLLNKAHSILDEMTAQGASVGLGVYSSILKAYCKEQKTAE 446
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A QLV +IS++GLQLD G+YDALI+AS+T+ DFQSAF+LF+DMREAR+ +L+ SYLTIMT
Sbjct: 447 AAQLVAEISAAGLQLDAGSYDALIDASMTAHDFQSAFALFKDMREARLPELRTSYLTIMT 506
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
GL EN++P LMA+FLD VV+DPR+E+ THDWNSIIHAFCK GRL+DA+RT RRM+FL+FE
Sbjct: 507 GLTENNKPGLMASFLDSVVDDPRIEIATHDWNSIIHAFCKVGRLDDARRTYRRMVFLRFE 566
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
PN+QTYLSLINGYV+ E+YFSVL++W E++R +GI+F H L+DAFLYALVKGGF
Sbjct: 567 PNNQTYLSLINGYVSTEKYFSVLILWTEVRR-------RGIEFNHELIDAFLYALVKGGF 619
Query: 602 FDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAGLN 661
FD MQV+EK+QE K+F+DKW+YKQAFME HKKLKVAKLRKRNF+KMEAL+AF+NWAG+N
Sbjct: 620 FDMAMQVIEKAQEFKIFIDKWRYKQAFMETHKKLKVAKLRKRNFRKMEALVAFRNWAGIN 679
>gi|242058949|ref|XP_002458620.1| hypothetical protein SORBIDRAFT_03g036830 [Sorghum bicolor]
gi|241930595|gb|EES03740.1| hypothetical protein SORBIDRAFT_03g036830 [Sorghum bicolor]
Length = 674
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/674 (52%), Positives = 484/674 (71%), Gaps = 24/674 (3%)
Query: 4 RKEASFMLIRKKFFCSSSSTSP-ETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQ-QQ 61
R S LI + SSSS+ P E P++YSFLQPSIF+ + + PP ++
Sbjct: 8 RCRPSLPLIARTSSSSSSSSEPHEIPTIYSFLQPSIFAPRPRPQPPPPPPPGAHDPAPRK 67
Query: 62 TLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL---QD 118
TL + +LE++L ++ +D+AW +FKSL A S PS + +L++HL++ Q
Sbjct: 68 TLPVADAAALESDLLAAVAEGRSDDAWLAFKSLAAASRSPSPHASAALVSHLAAAAAAQH 127
Query: 119 NHNLKRAFASVVYVIEKNPKLLDFQ--TVHTLLGSMRNANTAAPAFALVKCMFK-NRYFM 175
LKRAFA+ V+++EK+P + L ++ A +AAPA AL + M + R
Sbjct: 128 RLGLKRAFAAAVFLLEKSPHAAPVPEPALGALFSALAVAGSAAPAVALARAMLRCGRRLP 187
Query: 176 PFELWGGFLVDICRKNSN-FVAFLKVFEECCRIALDEN----LDFMKPNIYACNAALEGC 230
F +WG L+++ R + F AFLKVF+E C++ ++E M+P+ ACNA L GC
Sbjct: 188 AFSVWGHPLIELTRADPGAFAAFLKVFDEACKLVVEEKSPAEAAVMRPDRAACNAILSGC 247
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
C GL S+ DAE+V+ETMS +GV P+ SFG LA+LYA +G++ ++ EL++L++ GFS +
Sbjct: 248 CRGLGSLVDAERVLETMSAVGVSPDVESFGCLAFLYAWRGVRSRVDELDTLLDALGFSKK 307
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNM-EQSDFSKETYCEVVKGFLQNGNVKGL 349
F+ +L+SGY+K G+ ES S IL + + + + F +ETY EV + F+ +K L
Sbjct: 308 G-FFKNLVSGYLKSGDFESVSPIILRAVKERRVGDDNGFDEETYSEVAQCFVDQSRIKEL 366
Query: 350 ANLIIEAQKLEPS--GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
A LII+A ++E + + V+ SVGFGI++ACV LGL +KAHSILDEM A G S+GLGVY
Sbjct: 367 AQLIIQAHEIELTQQSMSVEDSVGFGIVNACVELGLLNKAHSILDEMTAQGASIGLGVYS 426
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
LKAYCKEH+TAEA QLV +IS++GL+LD G+YDALI+AS+T+ DFQSAF+LF+DMREA
Sbjct: 427 SILKAYCKEHKTAEAAQLVAEISAAGLKLDAGSYDALIDASMTAHDFQSAFALFKDMREA 486
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
R+ +L+ SYLTIMTGL EN++P LMA+FLD VV+DPR+E+ THDWNSIIHAFCK GRLED
Sbjct: 487 RLPELRTSYLTIMTGLTENNKPGLMASFLDSVVDDPRIEIATHDWNSIIHAFCKVGRLED 546
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN 587
A+RT RRM+FL+FEPN+QTYLSLINGYV+AE+YF+VL++W E++R KG +F H
Sbjct: 547 ARRTYRRMVFLRFEPNNQTYLSLINGYVSAEKYFNVLILWTEVRR-------KGTEFNHE 599
Query: 588 LVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKK 647
L+DAFLYALVKGGFFD MQV+EK+QE K+F+DKW+YKQAFME HKKLKVAKLRKRNF+K
Sbjct: 600 LIDAFLYALVKGGFFDMAMQVIEKAQEFKIFIDKWRYKQAFMETHKKLKVAKLRKRNFRK 659
Query: 648 MEALIAFKNWAGLN 661
MEAL+AFKNWAG+N
Sbjct: 660 MEALVAFKNWAGIN 673
>gi|218189191|gb|EEC71618.1| hypothetical protein OsI_04035 [Oryza sativa Indica Group]
Length = 670
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/650 (54%), Positives = 471/650 (72%), Gaps = 23/650 (3%)
Query: 26 ETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTD 85
E P++YSFLQPS+F+ + K P +TL + +LE L ++ + +D
Sbjct: 31 EIPTVYSFLQPSVFAPRPKPQPPP--PPPPTPPAHKTLPVGDAVALEEELLAAVSEDRSD 88
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNH-NLKRAFASVVYVIEKNPKL--LDF 142
+AW +F+SL + SL PS P +L++HL++ + LKRAFA+ V+++EK+P +
Sbjct: 89 DAWLAFRSLASASLSPSPPAAAALVSHLAAAHHHRLGLKRAFAAAVFLLEKSPHADPVPE 148
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMP-FELWGGFLVDICRKNSN-FVAFLKV 200
+ + S+ A +AAPA ALV+ + + +P F WG L+++ R ++ FVAFLKV
Sbjct: 149 AALQAVFTSLAAAGSAAPALALVRALLRCGRRLPGFPAWGSPLIELTRADTGAFVAFLKV 208
Query: 201 FEECCRIALDEN-----LDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
F+E C+ + E M+P++ ACNA L GCC L SV++AE+V+E MSV+GV P+
Sbjct: 209 FDEACKQMVAEEKSPSAAAAMRPDLAACNAVLGGCCRLLGSVTEAERVLEIMSVIGVSPD 268
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
SFG LA+LYA + + ++ EL+ L++ GFS + +F+ +LISGY+K + ES S IL
Sbjct: 269 VDSFGCLAFLYAWRDIPSRVDELDKLLDALGFSKK-IFFKNLISGYLKSCSFESVSSVIL 327
Query: 316 LCLGGGNMEQSD-FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP--SGIVVDRSVGF 372
L + S+ F E+Y EV + F+ NG ++ LA LII+AQ+ E + V+ SVGF
Sbjct: 328 RVLEERRVGDSNAFDLESYTEVAQCFVDNGRIRELAQLIIKAQETESLQQSLAVEDSVGF 387
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
GI++ACV LGL +KAHSILDEM A G SVGLGVY LKAYCKE RTAEA QLV +IS++
Sbjct: 388 GIVNACVELGLLNKAHSILDEMTAQGASVGLGVYSSILKAYCKEQRTAEAAQLVSEISAA 447
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GLQLD G+YDALI+AS+T+ DF SAFSLF++MREAR+ DL+ SYLTIMTGL EN+RPELM
Sbjct: 448 GLQLDAGSYDALIDASMTAHDFLSAFSLFKEMREARLPDLRTSYLTIMTGLTENNRPELM 507
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
A+FLD VV+DPR+E+ THDWNSIIHAFCK GRLEDA+RT RRM+FL++EPN+QTYLSLIN
Sbjct: 508 ASFLDTVVDDPRIEIATHDWNSIIHAFCKVGRLEDARRTYRRMVFLRYEPNNQTYLSLIN 567
Query: 553 GYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
GYV+AE+YFSVL++W E++R KG F H L+DAFLYALVKGGFFD MQV+EK+
Sbjct: 568 GYVSAEKYFSVLILWTEVRR-------KGADFNHELIDAFLYALVKGGFFDMAMQVIEKA 620
Query: 613 QEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAGLNA 662
QE+K+F+DKW++KQAFME HKKLKVAKLRKRNF+KMEALIAFKNWAGLNA
Sbjct: 621 QELKIFLDKWRHKQAFMETHKKLKVAKLRKRNFRKMEALIAFKNWAGLNA 670
>gi|125572286|gb|EAZ13801.1| hypothetical protein OsJ_03724 [Oryza sativa Japonica Group]
Length = 670
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/653 (53%), Positives = 469/653 (71%), Gaps = 29/653 (4%)
Query: 26 ETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTD 85
E P++YSFLQPS+F+ + K PP +TL + +LE L ++ + +D
Sbjct: 31 EIPTVYSFLQPSVFAPRPKPQPPPPPPP-PTPPAHKTLPVGDAVALEDELLAAVSEDRSD 89
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNH-NLKRAFASVVYVIEKNPKL--LDF 142
+AW +F+SL + SL PS P +L++HL++ + LKRAFA+ V+++EK+P+ +
Sbjct: 90 DAWLAFRSLASASLSPSPPAAAALVSHLAAAHHHRLGLKRAFAAAVFLLEKSPQADPVPE 149
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFK-NRYFMPFELWGGFLVDICRKNSN-FVAFLKV 200
+ + S+ A +A PA ALV+ + + R F +WG L+++ R ++ FVAFLKV
Sbjct: 150 AALQAVFTSLAAAASAVPALALVRALLRCGRRLPAFPVWGSPLIELTRADTGAFVAFLKV 209
Query: 201 FEECCRIALDEN----LDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
F+E C+ + E M+P++ ACNA L GCC L SV++AE+V+E MS + V P+
Sbjct: 210 FDEACKQMVSEKSPSAAAAMRPDLAACNAVLGGCCRLLGSVTEAERVLEIMSAIAVSPDV 269
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
SFG LA+LYA + + ++ EL+ L++ GF + +F+ +LISGY+K + ES S IL
Sbjct: 270 DSFGCLAFLYAWRDIPSRVDELDKLLDALGFGKK-IFFKNLISGYLKSCSFESVSSVILR 328
Query: 317 CL-----GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP--SGIVVDRS 369
+ GG N F E+Y EV + F+ NG ++ LA LII+AQ+ E + V+ S
Sbjct: 329 VVEERRVGGSNA----FDLESYTEVAQRFVDNGRIRELAQLIIKAQETESLQQSLAVEDS 384
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
VGFGI++ACV LGL +KAHSILDEM A G SVGLGVY LKAYCKE RTAEA QLV +I
Sbjct: 385 VGFGIVNACVELGLLNKAHSILDEMTAQGASVGLGVYSSILKAYCKEQRTAEAAQLVSEI 444
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
S++GLQLD G+YDALI+AS+T+ DF SAFSLF++MREAR+ DL+ SYLTIMTGL EN+RP
Sbjct: 445 SAAGLQLDAGSYDALIDASMTAHDFLSAFSLFKEMREARLPDLRTSYLTIMTGLTENNRP 504
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
ELMA+FLD VV+DPR+E+ THDWNSIIHAFCK GRLEDA+RT RRM+FL++EPN+QTYLS
Sbjct: 505 ELMASFLDTVVDDPRIEIATHDWNSIIHAFCKVGRLEDARRTYRRMVFLRYEPNNQTYLS 564
Query: 550 LINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVV 609
LINGYV+AE+YFSVL++W E++R KG F H L+DAFLYALVKGGFFD MQV+
Sbjct: 565 LINGYVSAEKYFSVLILWTEVRR-------KGADFNHELIDAFLYALVKGGFFDMAMQVI 617
Query: 610 EKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAGLNA 662
EK+QE+K+F+DKW++KQAFME HKKLKVAKLRKRNF+KMEALIAFKNWAGLNA
Sbjct: 618 EKAQELKIFLDKWRHKQAFMETHKKLKVAKLRKRNFRKMEALIAFKNWAGLNA 670
>gi|115440409|ref|NP_001044484.1| Os01g0788900 [Oryza sativa Japonica Group]
gi|20160827|dbj|BAB89767.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|20161191|dbj|BAB90118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534015|dbj|BAF06398.1| Os01g0788900 [Oryza sativa Japonica Group]
gi|215740585|dbj|BAG97241.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 670
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/656 (53%), Positives = 465/656 (70%), Gaps = 35/656 (5%)
Query: 26 ETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTD 85
E P++YSFLQPS+F+ + K PP +TL + +LE L ++ + +D
Sbjct: 31 EIPTVYSFLQPSVFAPRPKPQPPPPPPP-PTPPAHKTLPVGDAVALEDELLAAVSEDRSD 89
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNH-NLKRAFASVVYVIEKNPKL----- 139
+AW +F+SL + SL PS P +L++HL++ + LKRAFA+ V+++EK+P
Sbjct: 90 DAWLAFRSLASASLSPSPPAAAALVSHLAAAHHHRLGLKRAFAAAVFLLEKSPHADPVPE 149
Query: 140 LDFQTVHTLLGSMRNANTAAPAF-ALVKCMFKNRYFMPFELWGGFLVDICRKNSN-FVAF 197
Q V T L + +A A AL++C R F +WG L+++ R ++ FVAF
Sbjct: 150 AALQAVFTSLAAAASAAPALALVRALLRC---GRRLPAFPVWGSPLIELTRADTGAFVAF 206
Query: 198 LKVFEECCRIALDEN----LDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR 253
LKVF+E C+ + E M+P++ ACNA L GCC L SV++AE+V+E MS + V
Sbjct: 207 LKVFDEACKQMVSEKSPSAAAAMRPDLAACNAVLGGCCRLLGSVTEAERVLEIMSAIAVS 266
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT 313
P+ SFG LA+LYA + + ++ EL+ L++ GF + +F+ +LISGY+K + ES S
Sbjct: 267 PDVDSFGCLAFLYAWRDIPSRVDELDKLLDALGFGKK-IFFKNLISGYLKSCSFESVSSV 325
Query: 314 ILLCL-----GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP--SGIVV 366
IL + GG N F E+Y EV + F+ NG ++ LA LII+AQ+ E + V
Sbjct: 326 ILRVVEERRVGGSNA----FDLESYTEVAQRFVDNGRIRELAQLIIKAQETESLQQSLAV 381
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+ SVGFGI++ACV LGL +KAHSILDEM A G SVGLGVY LKAYCKE RTAEA QLV
Sbjct: 382 EDSVGFGIVNACVELGLLNKAHSILDEMTAQGASVGLGVYSSILKAYCKEQRTAEAAQLV 441
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+IS++GLQLD G+YDALI+AS+T+ DF SAFSLF++MREAR+ DL+ SYLTIMTGL EN
Sbjct: 442 SEISAAGLQLDAGSYDALIDASMTAHDFLSAFSLFKEMREARLPDLRTSYLTIMTGLTEN 501
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+RPELMA+FLD VV+DPR+E+ THDWNSIIHAFCK GRLEDA+RT RRM+FL++EPN+QT
Sbjct: 502 NRPELMASFLDTVVDDPRIEIATHDWNSIIHAFCKVGRLEDARRTYRRMVFLRYEPNNQT 561
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVM 606
YLSLINGYV+AE+YFSVL++W E++R KG F H L+DAFLYALVKGGFFD M
Sbjct: 562 YLSLINGYVSAEKYFSVLILWTEVRR-------KGADFNHELIDAFLYALVKGGFFDMAM 614
Query: 607 QVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAGLNA 662
QV+EK+QE+K+F+DKW++KQAFME HKKLKVAKLRKRNF+KMEALIAFKNWAGLNA
Sbjct: 615 QVIEKAQELKIFLDKWRHKQAFMETHKKLKVAKLRKRNFRKMEALIAFKNWAGLNA 670
>gi|326522078|dbj|BAK04167.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/429 (60%), Positives = 331/429 (77%), Gaps = 20/429 (4%)
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
E + + +S GV + F A+LYA + + ++ EL+ L+ GFS + F+ +L+SG
Sbjct: 1 EGLRDYVSCWGVARRGELWTF-AFLYAWRAVPSRVDELDKLLEALGFSKKG-FFKNLVSG 58
Query: 301 YVKLGNLESASRTILLCL-----GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
Y+K + ES S IL + G GN F +E Y EV + F+ NG ++ LA LI +
Sbjct: 59 YLKSCSFESVSSIILRAVEERRVGDGN----PFDEECYTEVAQCFVDNGRIRELAQLIFQ 114
Query: 356 AQKLEPSG--IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
AQ++E + +VVD SVGFG+++ACV LGL +KAHSILDEM A G SVGL +Y P LKAY
Sbjct: 115 AQEIESTHQLLVVDDSVGFGVVNACVGLGLLNKAHSILDEMTAQGASVGLAIYSPILKAY 174
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CKE +TAEA QLV +I+++GLQLD G+YDALI+AS+T+ DFQSAF+LF+DMREAR+ DL+
Sbjct: 175 CKEQKTAEAAQLVAEINAAGLQLDAGSYDALIDASMTAHDFQSAFALFKDMREARLPDLR 234
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
SYLTIMTGL EN+RPELMA+FLD VV+DPR+E+ THDWNSIIHAFCK GRLEDA+RT R
Sbjct: 235 TSYLTIMTGLTENNRPELMASFLDAVVDDPRIEIATHDWNSIIHAFCKVGRLEDARRTYR 294
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
RM+FL +EPN+QTYLSLINGY++AE+YF VL++W E++R KG F H L+DAFL
Sbjct: 295 RMLFLLYEPNNQTYLSLINGYLSAEKYFYVLILWTEVRR-------KGADFNHELIDAFL 347
Query: 594 YALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIA 653
+ALVKGGFFD MQV+EK+QE K+FVDKW++KQAFME HKKLKVAKLRKRNF+KMEALIA
Sbjct: 348 HALVKGGFFDMAMQVIEKAQESKIFVDKWRHKQAFMETHKKLKVAKLRKRNFRKMEALIA 407
Query: 654 FKNWAGLNA 662
FKNWAGLN+
Sbjct: 408 FKNWAGLNS 416
>gi|125527993|gb|EAY76107.1| hypothetical protein OsI_04033 [Oryza sativa Indica Group]
Length = 262
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/269 (73%), Positives = 235/269 (87%), Gaps = 7/269 (2%)
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M A G SVGLGVY LKAYCKE RTAEA QLV +IS++GLQLD G+YDALI+AS+T+ D
Sbjct: 1 MTAQGASVGLGVYSSILKAYCKEQRTAEAAQLVSEISAAGLQLDAGSYDALIDASMTAHD 60
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
F SAFSLF++MREAR+ DL+ SYLTIMTGL EN+RPELMA+FLD VV+DPR+E+ THDWN
Sbjct: 61 FLSAFSLFKEMREARLPDLRTSYLTIMTGLTENNRPELMASFLDTVVDDPRIEIATHDWN 120
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
SIIHAFCK GRLEDA+RT RRM+FL++EPN+QTYLSLINGYV+AE+YFSVL++W E++R
Sbjct: 121 SIIHAFCKVGRLEDARRTYRRMVFLRYEPNNQTYLSLINGYVSAEKYFSVLILWTEVRR- 179
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHK 633
KG F H L+DAFLYALVKGGFFD MQV+EK+QE+K+F+DKW++KQAFME HK
Sbjct: 180 ------KGADFNHELIDAFLYALVKGGFFDMAMQVIEKAQELKIFLDKWRHKQAFMETHK 233
Query: 634 KLKVAKLRKRNFKKMEALIAFKNWAGLNA 662
KLKVAKLRKRNF+KMEALIAFKNWAGLNA
Sbjct: 234 KLKVAKLRKRNFRKMEALIAFKNWAGLNA 262
>gi|359479705|ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
mitochondrial-like [Vitis vinifera]
Length = 784
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 197/338 (58%), Gaps = 10/338 (2%)
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
++ Y ++VK FL+ G K LA +I+A+K E S + D S +I++C+ LG D+AH
Sbjct: 450 TERIYVKLVKAFLEAGKTKQLAEFLIKAEK-EDSPVSTDNSALVHVINSCILLGWLDQAH 508
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+LDEM G G VY LKAYCK +R E T L+ D +G+QLD Y+ALI++
Sbjct: 509 DLLDEMRLAGVRTGSSVYSSLLKAYCKANRAGEITSLLRDARKAGVQLDSSCYEALIQSR 568
Query: 449 ITSQDFQSAFSLFRDMREARI-YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ +D + A +F++M+EA+I + ++ G E+ LMA L E+ E+ RV+
Sbjct: 569 VLQKDTEGALHVFKEMKEAKIPRSGHREFEMLVKGCAESGEAGLMAKLLHEIKEEQRVDC 628
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT-AEQYFSVLMM 566
HDWN++IH FC+ ++DA++ L++M L PN QT+ S++ GY +Y V +
Sbjct: 629 GVHDWNNVIHFFCRKRLMQDAEKALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYVEVTEL 688
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ 626
W E+K S+ +KF+ L+DA LY V+GGFF +VVE + K+F+DK+KY+
Sbjct: 689 WGEMKSFASSS---SMKFDQELLDAVLYTFVRGGFFVRANEVVEMMERGKMFIDKYKYRT 745
Query: 627 AFMENHKKLKVAKLRK----RNFKKMEALIAFKNWAGL 660
F++ HK L +K K F++ +A + FK W GL
Sbjct: 746 LFLKYHKTLYKSKPPKVQTEAQFRRRDAALTFKKWVGL 783
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 127/569 (22%), Positives = 226/569 (39%), Gaps = 71/569 (12%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVI-EKNPKLLDFQT 144
+AWK F+ FP K + N+++ S D L++A+ V E LL+ +T
Sbjct: 104 DAWKLFEQHMGMEGFPRKSIVNTVLTSFSESLDVQWLEKAYGLVERAFAESKQNLLEKET 163
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
+ + + + PA +++ + + F P W L + + S ++ E
Sbjct: 164 LIYISFGLASCGLPVPASTVLRKLVEMEEFPPVSAWSAILAHMSQTASGAYLAAELILEI 223
Query: 205 CRIALDENLD----------FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
+ D +D MKPN A N AL GC + AEK+++ M +GV+P
Sbjct: 224 GYLFQDGRVDPRKKSNRPLLAMKPNTTAFNIALAGCLL-FGTTRKAEKLLDMMPRVGVKP 282
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQM---VFYSSLISGYVKLGNLESAS 311
+ + +A++Y G +E + +L+ ++E S + FY+ L++ ++K G+L+SAS
Sbjct: 283 DVNLLIIMAHIYERNGRREDLRKLKRHIDEAHNLSDIQFRQFYNCLLTCHLKFGDLDSAS 342
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK---LEPSGIVVDR 368
+L L ++ S T G + ++ + +K LE +
Sbjct: 343 HMVLEMLRKAREARNSLSAATLMFEAVGSGNTSTQEQVSEKSLSHRKSDGLENARPNTSL 402
Query: 369 SVGFGIISACVN-LGLSDKAHSILD------EMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
S+ + S N L L +A ILD +M + G+ PT + Y K
Sbjct: 403 SISYEEFSRDRNFLKLEAEAKEILDRLLAKLQMQVEFITTERGILQPTERIYVK------ 456
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
LV L+ G L E I ++ S S A ++ + I+
Sbjct: 457 ---LVKAF------LEAGKTKQLAEFLIKAEKEDSPVS---TDNSALVHVINS---CILL 501
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
G ++ LDE + V + ++S++ A+CKA R + LR +
Sbjct: 502 GWLDQAHD-----LLDE-MRLAGVRTGSSVYSSLLKAYCKANRAGEITSLLRDARKAGVQ 555
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKR-KISTDGQKGIKFEHNLVDAFLYALVKG- 599
+ Y +LI V + L ++ E+K KI G + +FE LVKG
Sbjct: 556 LDSSCYEALIQSRVLQKDTEGALHVFKEMKEAKIPRSGHR--EFE---------MLVKGC 604
Query: 600 ------GFFDAVMQVVEKSQEMKVFVDKW 622
G ++ +++ Q + V W
Sbjct: 605 AESGEAGLMAKLLHEIKEEQRVDCGVHDW 633
>gi|296085227|emb|CBI28722.3| unnamed protein product [Vitis vinifera]
Length = 1361
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 197/338 (58%), Gaps = 10/338 (2%)
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
++ Y ++VK FL+ G K LA +I+A+K E S + D S +I++C+ LG D+AH
Sbjct: 1027 TERIYVKLVKAFLEAGKTKQLAEFLIKAEK-EDSPVSTDNSALVHVINSCILLGWLDQAH 1085
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+LDEM G G VY LKAYCK +R E T L+ D +G+QLD Y+ALI++
Sbjct: 1086 DLLDEMRLAGVRTGSSVYSSLLKAYCKANRAGEITSLLRDARKAGVQLDSSCYEALIQSR 1145
Query: 449 ITSQDFQSAFSLFRDMREARI-YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ +D + A +F++M+EA+I + ++ G E+ LMA L E+ E+ RV+
Sbjct: 1146 VLQKDTEGALHVFKEMKEAKIPRSGHREFEMLVKGCAESGEAGLMAKLLHEIKEEQRVDC 1205
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT-AEQYFSVLMM 566
HDWN++IH FC+ ++DA++ L++M L PN QT+ S++ GY +Y V +
Sbjct: 1206 GVHDWNNVIHFFCRKRLMQDAEKALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYVEVTEL 1265
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ 626
W E+K S+ +KF+ L+DA LY V+GGFF +VVE + K+F+DK+KY+
Sbjct: 1266 WGEMKSFASSS---SMKFDQELLDAVLYTFVRGGFFVRANEVVEMMERGKMFIDKYKYRT 1322
Query: 627 AFMENHKKLKVAKLRK----RNFKKMEALIAFKNWAGL 660
F++ HK L +K K F++ +A + FK W GL
Sbjct: 1323 LFLKYHKTLYKSKPPKVQTEAQFRRRDAALTFKKWVGL 1360
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 134/609 (22%), Positives = 242/609 (39%), Gaps = 74/609 (12%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVI- 133
L ++ + +AWK F+ FP K + N+++ S D L++A+ V
Sbjct: 670 LENAIDGHRYSDAWKLFEQHMGMEGFPRKSIVNTVLTSFSESLDVQWLEKAYGLVERAFA 729
Query: 134 EKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSN 193
E LL+ +T+ + + + PA +++ + + F P W L + + S
Sbjct: 730 ESKQNLLEKETLIYISFGLASCGLPVPASTVLRKLVEMEEFPPVSAWSAILAHMSQTASG 789
Query: 194 FVAFLKVFEECCRIALDENLD----------FMKPNIYACNAALEGCCYGLQSVSDAEKV 243
++ E + D +D MKPN A N AL GC + AEK+
Sbjct: 790 AYLAAELILEIGYLFQDGRVDPRKKSNRPLLAMKPNTTAFNIALAGCLL-FGTTRKAEKL 848
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQM---VFYSSLISG 300
++ M +GV+P+ + +A++Y G +E + +L+ ++E S + FY+ L++
Sbjct: 849 LDMMPRVGVKPDVNLLIIMAHIYERNGRREDLRKLKRHIDEAHNLSDIQFRQFYNCLLTC 908
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK-- 358
++K G+L+SAS +L L ++ S T G + ++ + +K
Sbjct: 909 HLKFGDLDSASHMVLEMLRKAREARNSLSAATLMFEAVGSGNTSTQEQVSEKSLSHRKSD 968
Query: 359 -LEPSGIVVDRSVGFGIISACVN-LGLSDKAHSILD------EMNACGCSVGLGVYVPTL 410
LE + S+ + S N L L +A ILD +M + G+ PT
Sbjct: 969 GLENARPNTSLSISYEEFSRDRNFLKLEAEAKEILDRLLAKLQMQVEFITTERGILQPTE 1028
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
+ Y K LV L+ G L E I ++ S S A ++
Sbjct: 1029 RIYVK---------LVKAF------LEAGKTKQLAEFLIKAEKEDSPVS---TDNSALVH 1070
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+ I+ G ++ LDE + V + ++S++ A+CKA R +
Sbjct: 1071 VINS---CILLGWLDQ-----AHDLLDE-MRLAGVRTGSSVYSSLLKAYCKANRAGEITS 1121
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR-KISTDGQKGIKFEHNLV 589
LR + + Y +LI V + L ++ E+K KI G + +FE
Sbjct: 1122 LLRDARKAGVQLDSSCYEALIQSRVLQKDTEGALHVFKEMKEAKIPRSGHR--EFE---- 1175
Query: 590 DAFLYALVKG-------GFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRK 642
LVKG G ++ +++ Q + V W F + ++ A +
Sbjct: 1176 -----MLVKGCAESGEAGLMAKLLHEIKEEQRVDCGVHDWNNVIHFFCRKRLMQDA---E 1227
Query: 643 RNFKKMEAL 651
+ KKM +L
Sbjct: 1228 KALKKMRSL 1236
>gi|15218705|ref|NP_171809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200246|sp|Q9SA60.1|PPR6_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03100, mitochondrial; Flags: Precursor
gi|4587568|gb|AAD25799.1|AC006550_7 Contains PF|00637 Clathrin 7-fold repeat. EST gb|AA721862 comes
from this gene [Arabidopsis thaliana]
gi|44917465|gb|AAS49057.1| At1g03100 [Arabidopsis thaliana]
gi|332189408|gb|AEE27529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 793
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 201/341 (58%), Gaps = 13/341 (3%)
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
++E Y ++ K FL++G +K LA +++A+ E S + D S+ +I+AC++LG+ D+AH
Sbjct: 458 TEEIYVKLAKAFLESGKMKELAKFLLKAEH-EDSPVSSDNSMLINVINACISLGMLDQAH 516
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+LDEM G G VY LKAYC ++T E T L+ D +G+QLD Y+ALI++
Sbjct: 517 DLLDEMRMAGVRTGSSVYSSLLKAYCNTNQTREVTSLLRDAQKAGIQLDSSCYEALIQSQ 576
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGS---YLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ D A ++F++M+EA+I L+G + ++ G N LM+ L E+ E +
Sbjct: 577 VIQNDTHGALNVFKEMKEAKI--LRGGNQKFEKLLKGCEGNAEAGLMSKLLREIREVQSL 634
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT-AEQYFSVL 564
+ HDWN++IH F K G ++DA++ L+RM L PN QT+ S++ GY +Y V
Sbjct: 635 DAGVHDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSMVTGYAAIGSKYTEVT 694
Query: 565 MMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+W E+K + +KF+ L+DA LY V+GGFF +VVE ++ +FVDK+KY
Sbjct: 695 ELWGEMKSIAAATS--SMKFDQELLDAVLYTFVRGGFFSRANEVVEMMEKKNMFVDKYKY 752
Query: 625 KQAFMENHK---KLKVAKLRKRN-FKKMEALIAFKNWAGLN 661
+ F++ HK K K K++ + KK EA + FK W GL+
Sbjct: 753 RMLFLKYHKTAYKGKAPKVQSESQLKKREAGLVFKKWLGLS 793
>gi|224082666|ref|XP_002306785.1| predicted protein [Populus trichocarpa]
gi|222856234|gb|EEE93781.1| predicted protein [Populus trichocarpa]
Length = 750
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 198/339 (58%), Gaps = 10/339 (2%)
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
+++ Y ++VK FL++G K LA +I+A+K E S D S +I++C++LG D+AH
Sbjct: 416 TEKIYVKLVKAFLESGKTKELAAFLIKAEK-EDSPASNDDSALVHVINSCISLGWLDQAH 474
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+LDEM G VY LKAYCK ++T E T L+ D +G+QLD +Y+ALIE
Sbjct: 475 DLLDEMCLAGIRTSSSVYASLLKAYCKANQTGEVTALLRDARRAGIQLDSSSYNALIEFR 534
Query: 449 ITSQDFQSAFSLFRDMREARIYDL-KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ +D + A +F++M+EA+I + ++ G E LMA L E+ E+ +
Sbjct: 535 VIQKDTKEALHIFKEMKEAKIPRTGHQEFEMLVKGCAEGGEAGLMAKLLQEIKEEQAADS 594
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT-AEQYFSVLMM 566
HDWN++IH FCK ++DA++ L++M L PN QT+ S++ GY +Y V +
Sbjct: 595 GVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYIEVTEL 654
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ 626
W E+K S +KF+ L+D+ LY V+GGFF +VV+ ++ K+F+DK+KY+
Sbjct: 655 WGEMK---SIASATSMKFDQELLDSVLYTFVRGGFFSRANEVVDMMEKGKMFIDKYKYRT 711
Query: 627 AFMENHKKL---KVAKLRKRNF-KKMEALIAFKNWAGLN 661
+++ HK L K K++ + KK EA + FK W GLN
Sbjct: 712 LYLKYHKTLYKGKTPKIQTESLVKKREAALTFKKWLGLN 750
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 121/263 (46%), Gaps = 23/263 (8%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPK-LLDFQ 143
++AWK F+ FP K + N L+ S+ D L++A+ V IE++ + LL+ +
Sbjct: 72 NDAWKLFEQHLHMDGFPRKSIVNKLLTSYSASLDVPWLEKAYGLVEQTIEESKQNLLEKE 131
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
+ L + PA +++ + + + P W L + ++ E
Sbjct: 132 PLIYLSFVLAKCGLPVPASTVLRKLIQMEQYPPVTAWSAILAHMSLTAPGAYLAAELILE 191
Query: 204 CCRIALDENLD----------FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR 253
+ D +D MKPN A N AL GC + AE++++ M +G+R
Sbjct: 192 IGYLFQDGRVDPRKKINAPLIAMKPNTIAMNIALTGCLL-FGTTRKAEQLLDMMPRIGIR 250
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV-------FYSSLISGYVKLGN 306
+ + +A++Y G +E++ +L+ +++ SQ + FY+ L++ ++K G+
Sbjct: 251 ADTNLLIIMAHIYERNGRREELRKLQRHIDD----SQSLTDTQFRQFYNCLLTCHLKFGD 306
Query: 307 LESASRTILLCLGGGNMEQSDFS 329
L++AS +L+ L ++ F+
Sbjct: 307 LDAASNMVLIMLRKAREARNSFA 329
>gi|168036356|ref|XP_001770673.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678034|gb|EDQ64497.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 717
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 196/703 (27%), Positives = 326/703 (46%), Gaps = 66/703 (9%)
Query: 11 LIRKKFFCSSSSTSPETP----SLYSFLQPSIFSLKRKSLQQD--------PPNSPTQQQ 58
L K FCS S P S +L +I R S ++ PP+S +
Sbjct: 14 LAAKSSFCSRSPILTRFPAGAISNVGYLDSTIRKGDRDSHLRNSSASRSRLPPSSAKVSK 73
Query: 59 QQQTL------TQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAH 112
++ T D+ +L + L TDEAW+ + L+ + FP + T+ L+A
Sbjct: 74 EKYVAPKHTERTGDDDANLIEEMRDLLKQRRTDEAWQVMQLLSRSGKFPDRQCTSRLVAQ 133
Query: 113 LSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFAL--VKCMFK 170
LS L RA V+ + KN ++ + L ++ +A + A +AL + MF+
Sbjct: 134 LSHRGVPSCLARA-QQVLTNLRKNNQVDLLDSDSLGLLALASARSGAARYALNVLNLMFE 192
Query: 171 NRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRI---ALDENLDF--MKPNIYACNA 225
+ ++W + + R + + L++F+E CR+ A + +D +P+ A NA
Sbjct: 193 MDIYPSVKVWSAVVSRLGRHVDDCLLALELFDEVCRLIEEAESQGIDVRSARPDTGAFNA 252
Query: 226 ALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA-------LKGLQEKIVEL 278
AL C L + E ++ +M G++P+ +F L LYA LK L +++VE
Sbjct: 253 ALNACAT-LGFAAKGEDLMNSMRRCGLQPDSITFNTLIKLYAKCDQRKLLKSLPDEMVEN 311
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK-------- 330
+ + +E +S LI+GYV LG+L A LL EQ + SK
Sbjct: 312 KVMPDESTVNS-------LIAGYVGLGDLREAE--ALLRRLQDKSEQGNDSKTKSKSWWG 362
Query: 331 -------ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNLG 382
TY ++KG++Q G + A + A +++ V + IS+CV LG
Sbjct: 363 AHLRPDVRTYTTLMKGYVQKGR-RSDAMRTLLAMQMDKDPRSSPNEVSYTTAISSCVRLG 421
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
L D+A +L EM V + Y LK YC + +A +V D+ +G+ LDV +Y+
Sbjct: 422 LMDEATVVLQEMLKHNIPVNVITYNILLKGYCSARKLQKAHSVVKDMEEAGVALDVVSYN 481
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
LI I + D +A F+ MRE I SY T+M N +P+ + +E+ D
Sbjct: 482 TLINGCIETGDNAAALDYFKKMRETGISPSAVSYTTLMKAFGRNGQPKQVHLVFEEMRND 541
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
PR++ WN ++ ++C+ GR+ DAKR +M + P TY +L+ GY
Sbjct: 542 PRMKTDAVAWNVLLDSYCRNGRVADAKRMFLQMKEDRVLPTAFTYATLVKGYALGGMLGE 601
Query: 563 VLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKW 622
VL++W EIK + + D ++ + L++ + V+ G+F ++VV +E + +K
Sbjct: 602 VLVLWKEIKER-TDDEVNPLQPDEVLLNCLVDTCVRAGYFQKALEVVACMEEKGIPANKT 660
Query: 623 KYKQAFMENHKKLKVAK-----LRKRNFKKMEALIAFKNWAGL 660
KYK+ F+E + L K R R+ +K +A+ AFK W GL
Sbjct: 661 KYKRIFIELYSNLYTGKHASQRRRDRSEEKRDAVEAFKFWLGL 703
>gi|449458514|ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
mitochondrial-like [Cucumis sativus]
gi|449503826|ref|XP_004162196.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
mitochondrial-like [Cucumis sativus]
Length = 796
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 191/333 (57%), Gaps = 10/333 (3%)
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++V+ FL+ G K LA +I+A++ E S + D SV +I+AC++LG D+AH +LDEM
Sbjct: 468 KLVRAFLEAGKTKDLAQFLIKAER-EESPVSNDDSVLVHVINACISLGWLDQAHDLLDEM 526
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ G G VY LKAYCK +RT E L+ D +G+QLD YDALI + + D
Sbjct: 527 HLAGVRTGSSVYGSLLKAYCKANRTREVASLLRDARKAGIQLDSSCYDALINSRVLQNDN 586
Query: 455 QSAFSLFRDMREARI-YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A F++M+EA+I + ++ EN LMA L E+ + RV+ HDWN
Sbjct: 587 KGALKFFQEMKEAKIPRSGHQEFRRLVEKSAENDEAGLMAKLLQEIKDGQRVDYGLHDWN 646
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT-AEQYFSVLMMWHEIKR 572
++IH FCK ++DA++ L++M L PN QT+ S++ GY +Y V +W E+K
Sbjct: 647 NVIHFFCKKRLMQDAEKALKKMRSLGHCPNAQTFHSMVTGYAAIGGKYVEVTELWGEMK- 705
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENH 632
S +KF+ L+D+ LY V+GGFF +VVE ++ K+F+DK+KY+ F++ H
Sbjct: 706 --SIASASFLKFDQELLDSVLYTFVRGGFFARANEVVEVMEKDKMFIDKYKYRTLFLKYH 763
Query: 633 KKLKVAKLRK----RNFKKMEALIAFKNWAGLN 661
+ L K K +K E +AFK W GL+
Sbjct: 764 RTLYKGKAPKFQTEAQLRKRETTLAFKKWVGLD 796
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 139/332 (41%), Gaps = 25/332 (7%)
Query: 15 KFFCSSSSTSPETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETN 74
+ F SS+S+S P + I +K S + Q + L+ D T++E
Sbjct: 57 RAFVSSTSSSNVEPIVLGLKNKCIIDIKLLSTLSE--RILVQARDPAKLSMDIQTAIEEQ 114
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVI- 133
++ WK ++ FP K V N L+ + + L++A+ V
Sbjct: 115 --------RLNDTWKLYQQHMQMEGFPRKSVVNKLLTCFAETLEIQWLEKAYDLVEQAFA 166
Query: 134 EKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSN 193
E LL+ + L S+ PA +++ + K + +P W L + +
Sbjct: 167 EGKQNLLEKDPLIYLSYSLAKLGLPIPASTILRNLIKMEHLLPVAAWSAILAHMSQTGPG 226
Query: 194 FVAFLKVFEECCRIALDENLD----------FMKPNIYACNAALEGCCYGLQSVSDAEKV 243
++ E + D +D MKPN A N AL GC + AE++
Sbjct: 227 AFLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNSTAFNIALSGCVL-FGTTRKAEEL 285
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF---YSSLISG 300
++ M +GV+ + + + ++Y G +E++ +L+ ++E S + F YS L++
Sbjct: 286 LDMMPRIGVKVDTNLLMVMVHIYERNGRREELKKLQRHIDEAHNLSDVQFRQFYSCLLTC 345
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
++K G+LESAS +L L + ++ + T
Sbjct: 346 HLKFGDLESASNMVLGMLRKAKIAKNSVATAT 377
>gi|302768505|ref|XP_002967672.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
gi|300164410|gb|EFJ31019.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
Length = 717
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 163/633 (25%), Positives = 297/633 (46%), Gaps = 45/633 (7%)
Query: 72 ETNLHKSLLTNNTDEAWKSFKSLTAN-SLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVV 130
+T L ++L T AW F+++T + P + + L+A L ++ +A +V
Sbjct: 73 QTALLEALKQWKTQVAWTKFETMTKKLGVLPDRVCVSRLVAQLCHQGTAASVSKAQQIMV 132
Query: 131 YVIEKN--PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDIC 188
+ +K +L+D + L+ + TA + +++ M + Y P ++W + +
Sbjct: 133 ELRQKRKVSELVDCDAMGLLVMASARVGTAHYSLGVLRTMLELGYHPPVKVWSAVVSKLG 192
Query: 189 RKNSNFVAFLKVFEECCR-------IALDENLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
+ + LKVF+E C+ I L ++ MKP+ A NAAL C + ++ AE
Sbjct: 193 KNVDDAQLALKVFDEVCQCVVEQGMIQLHRKMERMKPDTGAFNAALNACA-NIGNLERAE 251
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
++ E M GV+ N +F + LYA +K+ ++ M + ++SL++ +
Sbjct: 252 QLWELMPAFGVKANTLTFNVMIKLYARVEKLDKLEQILHTMADADVDPDATTFNSLVAAF 311
Query: 302 VKLGNLESASRTILLCLGGGNMEQ-------------SDFSKE--TYCEVVKGFLQNGNV 346
V LG L A + G G ++ + F + TY ++KG++Q+ V
Sbjct: 312 VGLGELSLAESIVQSLRGEGEHQKRVPALLPKLREHSAKFQPDVRTYTTLMKGYVQHNRV 371
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
L++ Q+ + S + + I AC +GL D+A IL EM + + Y
Sbjct: 372 SDAMQLLVAMQQEKTSAAMPNEVTFTTAIRACAKMGLLDEARVILQEMATQKVAANVVTY 431
Query: 407 VPTLKAYCKEHRT--AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
L+ C T A ++V D+ +G++LDV +Y+ LI + + D + A ++F M
Sbjct: 432 NTLLQGVCVFPITDMKRALEIVEDMKEAGVELDVVSYNTLINGYLEAGDNEQALAVFTRM 491
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
REA++ K +Y T+M + R EL+ ++ DPRV V WN++I A+ +AG
Sbjct: 492 REAKVPASKVTYGTLMKAFARSGRTELVVKVFTQMALDPRVRVDVVAWNTLIDAYARAGL 551
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK-RKISTDGQK--- 580
+DA R L M F P + TY +L+ Y + + ++++W EI R + D
Sbjct: 552 EQDATRALEDMKSRGFSPTNATYNTLVKTYGRSRNFGQLILLWKEINARSVEEDSAAVRD 611
Query: 581 ------GIKFEHNLVDAFLYALVKGGFFDAVMQVVE--KSQEMKVFVDKWKYKQAFMENH 632
+K + L+D+ + + V+GG+F +QVV+ Q + K KYK+ ++E +
Sbjct: 612 KPLVVGALKPDAALLDSLIDSFVRGGYFQLALQVVDCMDRQGIHSGRAKAKYKRLYVELY 671
Query: 633 KKLKVA-----KLRKRNFKKMEALIAFKNWAGL 660
L + + + + ++ A+ AFK W GL
Sbjct: 672 ANLYTSRHTSERRKSKTAERRRAVEAFKFWVGL 704
>gi|302761110|ref|XP_002963977.1| hypothetical protein SELMODRAFT_82002 [Selaginella moellendorffii]
gi|300167706|gb|EFJ34310.1| hypothetical protein SELMODRAFT_82002 [Selaginella moellendorffii]
Length = 716
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 164/634 (25%), Positives = 296/634 (46%), Gaps = 47/634 (7%)
Query: 72 ETNLHKSLLTNNTDEAWKSFKSLTAN-SLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVV 130
+T L ++L T AW F+++T + P + + L+A L ++ +A +V
Sbjct: 72 QTALLEALKQWKTQVAWTKFETMTKKLGVLPDRVCVSRLVAQLCHQGTAASVSKAQQIMV 131
Query: 131 YVIEKN--PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDIC 188
+ +K +L+D + L+ + TA + +++ M + Y P ++W + +
Sbjct: 132 ELRQKRKVSELVDCDAMGLLVMASARVGTAHYSLGVLRTMLELGYHPPVKVWSALVSKLG 191
Query: 189 RKNSNFVAFLKVFEECCR-------IALDENLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
+ + LKVF+E C+ I L ++ MKP+ A NAAL C + ++ AE
Sbjct: 192 KNVDDAQLALKVFDEVCQCVAEQGMIQLHRKMERMKPDTGAFNAALNACA-NIGNLERAE 250
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
++ E M GV+ N +F + LYA +K+ ++ M + ++SL++ +
Sbjct: 251 QLWELMPAFGVKANTLTFNVMIKLYARVEKLDKLEQILHTMADADVDPDATTFNSLVAAF 310
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSK----------------ETYCEVVKGFLQNGN 345
V LG L S + +I+ L G Q+ TY ++KG++Q+
Sbjct: 311 VGLGEL-SLAESIVQSLRGEGEHQTRVPALLPKLREHSAKFQPDVRTYTTLMKGYVQHNR 369
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
V L++ Q+ + S + + I AC +GL D+A IL EM + +
Sbjct: 370 VSDAMQLLVAMQQEKTSAAMPNEVTFTTAIRACAKMGLLDEARVILQEMATQKVAANVVT 429
Query: 406 YVPTLKAYCKEHRT--AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y L+ C T A ++V D+ +G++LDV +Y+ LI + + D + A + F
Sbjct: 430 YNTLLQGVCVFPITDMKRALEIVEDMKEAGVELDVVSYNTLINGYLEAGDNEQALAAFTR 489
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
MREA++ K +Y T+M + R EL+ ++ DPRV V WN++I A+ +AG
Sbjct: 490 MREAKVPASKVTYGTLMKAFARSGRTELVVKVFTQMALDPRVRVDVVAWNTLIDAYARAG 549
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK-RKISTDGQK-- 580
+DA R L M F P + TY +L+ Y + + ++++W EI R + D
Sbjct: 550 LEQDATRALEDMKSRGFSPTNATYNTLVKTYGRSRNFGLLILLWKEINARSVEEDSAAVR 609
Query: 581 -------GIKFEHNLVDAFLYALVKGGFFDAVMQVVE--KSQEMKVFVDKWKYKQAFMEN 631
+K + L+D+ + + V+GG+F +QVV+ Q + K KYK+ ++E
Sbjct: 610 DKPLVVGALKPDAALLDSLIDSFVRGGYFQLALQVVDCMDRQGIHSGRAKAKYKRLYVEL 669
Query: 632 HKKLKVA-----KLRKRNFKKMEALIAFKNWAGL 660
+ L + + + + ++ A+ AFK W GL
Sbjct: 670 YANLYTSRHTSERRKSKTAERRRAVEAFKFWVGL 703
>gi|255567544|ref|XP_002524751.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535935|gb|EEF37594.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 787
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 192/339 (56%), Gaps = 10/339 (2%)
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
+++ Y ++VK FL++G K LA + +A+K E S D S +I++C++L D+AH
Sbjct: 453 TEKVYVKLVKAFLESGKTKELAAFLYKAEK-EDSPSSNDDSPLVHVINSCISLDWLDQAH 511
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+LDEM G + VY LKAYCK +R E L+ D +G+QLD Y ALI++
Sbjct: 512 DLLDEMRVAGVRMSSSVYASLLKAYCKANRAGEVKALLRDARKAGIQLDSSCYGALIKSR 571
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKG-SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ +D Q A LF++M++A+I + ++ G ++ L+A L E+ E V+
Sbjct: 572 VLEEDTQGALHLFKEMKDAKIPRAGNQEFEMLVKGCADDGEAGLLAKLLREIREGQTVDS 631
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT-AEQYFSVLMM 566
HDWN +IH FCK ++DA++ L++M L PN QT+ S++ GY +Y V +
Sbjct: 632 GVHDWNYVIHFFCKKRLMQDAEKALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYVEVTEL 691
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ 626
W E+K S +KF+ L+D+ LY V+GGFF +VV +++++F+DK+KY+
Sbjct: 692 WGEMK---SIASATSMKFDQELLDSVLYTFVRGGFFSRANEVVAMMEKVEMFIDKYKYRT 748
Query: 627 AFMENHKKLKVAKLRK----RNFKKMEALIAFKNWAGLN 661
F++ HK L K K +K EA ++FK W GL+
Sbjct: 749 LFLKYHKTLYKGKSPKIQTEAQARKREAALSFKKWVGLS 787
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 116/248 (46%), Gaps = 17/248 (6%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVI-EKNPKLLDFQT 144
+AWK F+ FP K V N L+A ++ D L++A+ V I E LL+ T
Sbjct: 110 DAWKLFEKHMQMEGFPQKSVVNKLLASIAESNDVPWLEKAYGLVEQAIKESKQNLLEKDT 169
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
+ L ++ A A +++ + + + P W L + ++ E
Sbjct: 170 LIFLSFNLAKCGLAVLASTVLRKLIEMEQYPPVTAWSAILAHMSLTAPGAYLAAELILEI 229
Query: 205 CRIALDENLD----------FMKPNIYACNAALEGC-CYGLQSVSDAEKVIETMSVLGVR 253
+ D +D MKPN + N AL GC +G + AE++++ + +G++
Sbjct: 230 GYLFQDGKVDPRKKCNATLIAMKPNTTSVNIALAGCLVFG--TTRKAEQLLDLIPRVGIK 287
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQM---VFYSSLISGYVKLGNLESA 310
N + +A++Y G ++++++L+ ++E S + FY+ L+S ++K G+L+SA
Sbjct: 288 VNATLLITMAHIYERNGRRQELMKLQRHIDEAHSISDIQYRQFYNCLLSCHLKFGDLDSA 347
Query: 311 SRTILLCL 318
S +L L
Sbjct: 348 SDMVLKML 355
>gi|357140479|ref|XP_003571794.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
mitochondrial-like [Brachypodium distachyon]
Length = 806
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 186/339 (54%), Gaps = 10/339 (2%)
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
++ Y ++VK FL+ + LA+ +++A K E S + V+ S +I+AC+++GL ++AH
Sbjct: 472 TETMYAKLVKAFLEADKISALASFLVKASK-EDSPVSVESSFVVQVINACISVGLLEQAH 530
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKE-HRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+LDEM G VG +Y LKAYCKE H + T L+ D +G+QLD Y+ LI++
Sbjct: 531 DLLDEMRFSGIKVGSSIYSSLLKAYCKEGHHEDDITALLKDAQQAGIQLDSSCYEDLIQS 590
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ ++ A LF++MR +++ ++ +N L ++EV V
Sbjct: 591 RVHHKNTAGALHLFKEMRNSKVVKSGHREFEMLVQSCDNSEAALTTKLVEEVKSGHTVNH 650
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT-AEQYFSVLMM 566
HDWN++IH FCK + DA + L +M L PN QT+ SL+ Y +Y V +
Sbjct: 651 AIHDWNNVIHFFCKKRLMHDAHKALSKMRVLGHTPNAQTFHSLVTAYAAIGGKYVEVTDL 710
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ 626
W E+K +++ +KF+ L+D+ LY V+GGFF M+V+E ++ K+F+DK+KYK
Sbjct: 711 WGEMKVLANSN---SMKFDQELLDSLLYCFVRGGFFLRAMEVIEMMEKCKMFIDKYKYKS 767
Query: 627 AFMENHKKLKVAKLRK----RNFKKMEALIAFKNWAGLN 661
+++ H+ + K K + EA + FK W GL
Sbjct: 768 LWLKYHRTMYKGKAPKVQTEAQLIRREAALQFKRWIGLT 806
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
D+AW++++ P K V + LI + +D H L +++ V + E+ +LL+ +
Sbjct: 130 DDAWRAYEKHVHMDGLPRKSVLSKLITGFAVTRDVHRLNQSYNVVDHAFEEKHELLEKEP 189
Query: 145 VHTLLGSMRNANTAAPAFA--LVKCMFKNRYFMPFELWGGFLVDICRK-NSNFVAFLKVF 201
+ L S+ A A P A +V+ + K + P W G + +C+ N F+A V
Sbjct: 190 LIYL--SLTLAQCALPNLAVNVVRKLVKMEAYPPVAAWSGIIAHMCQTANGAFLAADMVM 247
Query: 202 EECC---------RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
E R + L MKPN + N L + AE+++E M +GV
Sbjct: 248 EIGYLFQNNRVDPRKKSNRPLLSMKPNSFTFNIVLTASLL-FGTTKKAEQLLELMPRIGV 306
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQM---VFYSSLISGYVKLGNLES 309
+P+ S +A +Y G +++IV+L+ ++E S++ FY L+S ++K G+L+S
Sbjct: 307 KPDVSLLIVMARIYEKNGHKDEIVKLKRHVDEACGLSELEFQQFYDCLLSCHLKFGDLDS 366
Query: 310 ASRTILLCLGGG 321
A +L L G
Sbjct: 367 AVDMVLDMLRKG 378
>gi|413934189|gb|AFW68740.1| hypothetical protein ZEAMMB73_971808 [Zea mays]
Length = 768
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 206/393 (52%), Gaps = 27/393 (6%)
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK---------ET-YCEVV 337
SSQM+ ++S G LE +R + L EQ K ET Y ++V
Sbjct: 384 SSQMLSHASFFKDN-SFGRLELDARESVRLLTDKLQEQVGLVKSEHGILHPTETMYAKLV 442
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
K FL+ + LA+ +++A K E S + V+ S +I+AC++LGL ++AH +LDEM
Sbjct: 443 KAFLEADKISALASFLVKASK-EDSPVSVESSFVVQVINACISLGLLEQAHDLLDEMRFS 501
Query: 398 GCSVGLGVYVPTLKAYCKE-HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G VG +Y LKAYCKE + T L+ D +G+QLD Y+ LI++ + +
Sbjct: 502 GIRVGSSIYSSLLKAYCKEGQHEDDITALLKDAQQAGIQLDSSCYEDLIQSRVNHSNTTG 561
Query: 457 AFSLFRDMREARIYDLKGSYL---TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A LF++++ + LK ++ I+ G +N LM ++EV D V+ H+WN
Sbjct: 562 ALHLFKELKNLNV--LKAGHMEFQRIVQGSDDN-EAALMTKLVEEVRSDHTVDHAVHEWN 618
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT-AEQYFSVLMMWHEIKR 572
++IH FCK + DA R L +M PN QT+ SLI Y +Y V +W E+K
Sbjct: 619 NVIHFFCKKRLMHDAHRALNKMRASGHVPNAQTFHSLITAYAAIGGKYVEVTDLWGEMKL 678
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENH 632
S +KF+ L+D+ LY V+GGFF M+V+E ++ ++F+DK+KYK +++ H
Sbjct: 679 LASLSS---MKFDQELLDSLLYCFVRGGFFLRAMEVIEMMEKREMFIDKYKYKSLWLKYH 735
Query: 633 KKLKVAKLRK----RNFKKMEALIAFKNWAGLN 661
+ L K K K+ EA I FK W GL
Sbjct: 736 RTLYKGKAPKVQTEAQLKRREAAIRFKKWIGLT 768
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 130/271 (47%), Gaps = 21/271 (7%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
D+AW++++ P K V + LI L+ D+H LK+++ V + E+ +LLD +
Sbjct: 98 DDAWRAYEKHVHMDGLPRKSVLSKLITGLAESCDHHWLKQSYNVVSHAFEEKQELLDKEP 157
Query: 145 VHTLLGSMRNANTAAPAFAL--VKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE 202
+ L S+ A+ A P AL V+ + K + P W L +C+ N+ +
Sbjct: 158 LIYL--SLILAHCALPNLALNVVRKLVKMEAYPPVAAWSAILAHMCQTNTGAFLGADLVM 215
Query: 203 ECCRIALDENLD----------FMKPNIYACNAALEGC-CYGLQSVSDAEKVIETMSVLG 251
E + + +D MKPN + N L +G + AE+++E M +G
Sbjct: 216 ELGYLFQNNRVDPRKKSNRPLLSMKPNSFTFNIVLTASLVFG--TTRKAEQLLELMPRIG 273
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNE-FGFSSQMV--FYSSLISGYVKLGNLE 308
V+P + +A++Y G +++I +L+ ++E +G S V FY L+S ++K G+ +
Sbjct: 274 VKPEVNLLIVMAHIYERNGRRDEIRKLKRHVDEAYGLSESEVRQFYDCLLSCHLKFGDFD 333
Query: 309 SASRTIL-LCLGGGNMEQSDFSKETYCEVVK 338
A +L + G N ++S + + E V+
Sbjct: 334 YAVDMVLDMIRKGKNAKRSLEAAKAVLEAVE 364
>gi|326516602|dbj|BAJ92456.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 775
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 185/338 (54%), Gaps = 10/338 (2%)
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
++ TY ++VK FL+ + LA+ +++A K E S + V+ S +I+AC++LGL ++AH
Sbjct: 441 TETTYAKLVKTFLEADKISALASFLVKASK-EDSPVSVESSFVVQVINACISLGLLEQAH 499
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKE-HRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+LDEM G VG +Y LKAYCKE + + T L+ D +G+QLD Y+ LI++
Sbjct: 500 DLLDEMRFSGVRVGSSIYSSLLKAYCKEGNHEDDITALLKDAQQAGIQLDSSCYEDLIKS 559
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ A LF++M+ + I ++ +N+ L A ++EV V
Sbjct: 560 RAHHNNTTGALHLFKEMKSSNIKKSVNREFEMLVQSCDNNEAALTAKLVEEVKSGHTVNH 619
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY-VTAEQYFSVLMM 566
HDWN++IH FCK + DA + L +M L PN QT+ SL+ Y +Y V +
Sbjct: 620 AIHDWNNVIHFFCKKRLMHDAHKALSKMRVLGHTPNAQTFHSLVTAYAAVGGKYVEVTDL 679
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ 626
W E+K +++ +KF+ L+D+ LY V+GGFF M+V+E + K+F+DK+KYK
Sbjct: 680 WGEMKVLANSN---SMKFDQELLDSLLYCFVRGGFFLRAMEVIELMESSKLFIDKYKYKS 736
Query: 627 AFMENHKKLKVAKLRK----RNFKKMEALIAFKNWAGL 660
+++ H+ L K K + EA + FK W GL
Sbjct: 737 LWLKYHRTLYKGKAPKVQTEAQLIRREAALRFKKWIGL 774
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 18/253 (7%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
D+AW++++ P K V + LI ++ D H L ++++ V + + P+LL+ +
Sbjct: 99 DDAWRAYEKHLHMDGLPRKSVLSKLITGFAATCDAHRLNQSYSVVNHTFRERPELLEKEA 158
Query: 145 VHTLLGSMRNANTAAPAFA--LVKCMFKNRYFMPFELWGGFLVDICRKNS-NFVAFLKVF 201
+ L S+ A A P A +V+ + K + P W + +C+ + +F+A V
Sbjct: 159 LIYL--SLVLARYALPDLAVNVVRKLVKIEAYPPVAAWSAVIAHMCQTATGSFLAADMVM 216
Query: 202 EEC---------CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
E R + L MKPN + N L + AE+++E M +GV
Sbjct: 217 EIGYLFQNNRVDPRKKSNRPLLAMKPNSFTFNIVLTASLL-FGTTKKAEQLLELMPRIGV 275
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF---YSSLISGYVKLGNLES 309
+P S +A +Y G +++I +L+ ++E S+ F Y L+S ++K G+L+S
Sbjct: 276 KPEASLLVVMARIYEKNGHKDEIHKLKRHVDEACGLSESEFRQYYDCLLSCHLKFGDLDS 335
Query: 310 ASRTILLCLGGGN 322
A +L L GN
Sbjct: 336 AVDMVLDMLKKGN 348
>gi|297741482|emb|CBI32614.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 169/617 (27%), Positives = 287/617 (46%), Gaps = 45/617 (7%)
Query: 74 NLHKSLLT----NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASV 129
+L+++LLT T+EAW ++ T PS + L++ LS + L RA S+
Sbjct: 87 SLNQTLLTLLRQRKTEEAWLTYVQCTQ---LPSPTCLSRLVSQLSYQNTHQALTRA-QSI 142
Query: 130 VYVIEKNPKL--LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDI 187
+ + +L LD ++ L S A A +L+K M ++ Y + W + +
Sbjct: 143 IQRLRNERQLHRLDANSLGLLAVSAAKAGHTLYAASLIKSMLRSGYLPHVKAWSAVVSRL 202
Query: 188 CRKNSNF-VAFLKVFEECCRIA---LDENL-DFMKPNIYACNAALEGCCYGLQSVSDAEK 242
+ + LK+F+ R D L +P+ A NA L C L +
Sbjct: 203 AASGDDGPLEALKLFDSVTRRIHRFTDATLVADSRPDTAAYNAVLNACA-NLGDTKRFLQ 261
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV-ELESLMNEFGFSSQMVFYSSLISGY 301
V E M+ LG P+ ++ + L A ++ +V LE ++++ G M SL++ Y
Sbjct: 262 VFEEMTQLGAEPDVLTYNVMIKLCARVDRKDLLVFVLERILDK-GIQLCMTTLHSLVAAY 320
Query: 302 VKLGNLESASRTIL--------LC--LGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGL 349
V G+LE+A + + LC L N E ++ ++ Y ++KG+++ G V
Sbjct: 321 VGFGDLETAEKLVQAMREGRQDLCKILRDVNSENPAYAPDSRIYTTLMKGYMKEGRVTDT 380
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
++ + + S D ++SA V G D+A +L EM G Y
Sbjct: 381 VRMLEAMRHQDDSTSQPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRVTYNIL 440
Query: 410 LKAYCKEHRTAEATQLVMD-ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
LK YC++ + +A +LV + + G+ DV +Y+ LI+ I D A + F +MR
Sbjct: 441 LKGYCEQLQIDKAKELVREMVDDEGIVPDVVSYNTLIDGCILVDDSAGALAYFNEMRARG 500
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
I K SY T+M + +P+L DE++ DPRV+V WN ++ A C+ G +E+A
Sbjct: 501 IAPTKISYTTLMKAFALSGQPKLANKVFDEMLRDPRVKVDLVAWNMLVEAHCRLGLVEEA 560
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
K+T++RM F PN TY SL NG A + L++W+E+K + +G L
Sbjct: 561 KKTVQRMRENGFYPNVATYGSLANGIALARKPGEALLLWNEVKERCPDEG---------L 611
Query: 589 VDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKL----KVAKLRK-R 643
+D V+ FF +++V +E + +K KY + ++E H ++ +K R+ R
Sbjct: 612 LDTLADICVRAAFFRKALEIVACMEENGIPPNKSKYTRIYVEMHSRMFTSKHASKARQDR 671
Query: 644 NFKKMEALIAFKNWAGL 660
++ A AFK W GL
Sbjct: 672 RSERKRAAEAFKFWLGL 688
>gi|297727589|ref|NP_001176158.1| Os10g0422566 [Oryza sativa Japonica Group]
gi|255679411|dbj|BAH94886.1| Os10g0422566, partial [Oryza sativa Japonica Group]
Length = 788
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 198/388 (51%), Gaps = 21/388 (5%)
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK---------ET-YCEVVK 338
SQM+ Y S LE +R +L L EQ K ET Y ++VK
Sbjct: 405 SQMLNYISFFKDK-SFARLELDARELLKLLSDKLQEQVGLVKSEYGILYPTETMYAKLVK 463
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
FL+ + LA+ +++A K E S + V+ S +I+AC++LG ++AH +LDEM G
Sbjct: 464 AFLEANKISALASFLVKASK-EDSPVSVESSFVVQVINACISLGWLEQAHDLLDEMRFSG 522
Query: 399 CSVGLGVYVPTLKAYCKE-HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
VG +Y LKAYCKE H + L+ D +G+QLD Y+ LI++ + A
Sbjct: 523 IRVGSTIYSSLLKAYCKEGHHEDDIAALLKDAQQAGIQLDPSCYEDLIQSRAHHNNTTGA 582
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+LF++++ I + ++ N+ L ++EV V HDWN++IH
Sbjct: 583 LNLFKELKSLNILKAGQNEFEMLVQGCNNNGAALTTKLVEEVRSGHPVNHAIHDWNNVIH 642
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY-VTAEQYFSVLMMWHEIKRKIST 576
FCK + DA + L +M L PN QT+ SL+ GY +Y V +W E+K ++
Sbjct: 643 FFCKKRLMHDAHKALGKMKALGHTPNAQTFHSLVTGYAAVGGKYVEVTDLWGEMKVLATS 702
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLK 636
+ F+ L+D+ LY V+GGFF M+V+E ++ K+F+DK+KYK +++ H+ L
Sbjct: 703 S---SMNFDQELLDSLLYCFVRGGFFLRAMEVIEMMEKGKMFIDKYKYKSLWLKYHRTLY 759
Query: 637 VAKLRK----RNFKKMEALIAFKNWAGL 660
K K K+ EA + FK W GL
Sbjct: 760 KGKAPKVQTEAQLKRREAALHFKRWIGL 787
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 191/485 (39%), Gaps = 74/485 (15%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
D+AW++++ P K V + LI + D H L +++ V + E+ KLL+ +
Sbjct: 112 DDAWRAYEKHIHMDGVPRKSVLSKLITGFAETCDAHWLNQSYNVVNHAFEEKSKLLEKEP 171
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSN-FVAFLKVFEE 203
+ L ++ ++ + +V+ + K + P W + +C+ + F+A V E
Sbjct: 172 LIFLSLALARSSLPNLSINVVRKLIKMEAYPPVAAWSAIVAHMCQTATGAFLAADMVMEI 231
Query: 204 C---------CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
R + L MKPN N L + AE+++E M +G++P
Sbjct: 232 GYLFQNNRVDPRKKSNRPLLLMKPNSLTFNIILTASLL-FGTTKKAEQLLELMPRIGLKP 290
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEF-GFSSQMV--FYSSLISGYVKLGNLESAS 311
+ SS +A +Y G +++I +L +NE G S + FY L+S ++K G+L+SA
Sbjct: 291 DVSSLIVMARIYEQNGHRDEIQKLRRHVNEACGLSESELRQFYDCLLSCHLKFGDLDSAV 350
Query: 312 RTILLCL-GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
IL L G N ++S + + E V+ + + +K +P
Sbjct: 351 DMILDMLKKGKNTKRSLEAAKAVLEAVEN----------NKIYLPYEKTKP--------- 391
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
VN G S+ K+ C + + D S
Sbjct: 392 --------VNSGSSN-------------------------KSVCTDSQMLNYISFFKDKS 418
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
+ L+LD L+ S Q L + +Y + Y ++ +E ++
Sbjct: 419 FARLELDARELLKLL-----SDKLQEQVGLVKS-EYGILYPTETMYAKLVKAFLEANKIS 472
Query: 491 LMAAFLDEVV-EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+A+FL + ED V V++ +I+A G LE A L M F Y S
Sbjct: 473 ALASFLVKASKEDSPVSVESSFVVQVINACISLGWLEQAHDLLDEMRFSGIRVGSTIYSS 532
Query: 550 LINGY 554
L+ Y
Sbjct: 533 LLKAY 537
>gi|242039671|ref|XP_002467230.1| hypothetical protein SORBIDRAFT_01g021710 [Sorghum bicolor]
gi|241921084|gb|EER94228.1| hypothetical protein SORBIDRAFT_01g021710 [Sorghum bicolor]
Length = 768
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 200/394 (50%), Gaps = 21/394 (5%)
Query: 283 NEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK---------ET- 332
N +SQM+ Y+S + E +R ++ L EQ K ET
Sbjct: 379 NPCSSNSQMLSYASFLKDN-SFARFELHARELVRLLTDKLQEQVGLVKSEHGILHPTETM 437
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++VK FL+ + L + +++A K E S + V+ S +I+AC++LGL ++AH +LD
Sbjct: 438 YAKLVKAFLEADKISALVSFLVKASK-EDSPVSVESSFVVQVINACISLGLLEQAHDLLD 496
Query: 393 EMNACGCSVGLGVYVPTLKAYCKE-HRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
EM G VG +Y LKAYCKE + T L+ D +G+QLD Y+ LI++
Sbjct: 497 EMRFSGIRVGSSIYSSLLKAYCKEGQHEDDITALLKDAQQAGIQLDASCYEDLIQSRANH 556
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ A LF++++ + + +++ LM ++EV V+ H+
Sbjct: 557 SNTTGALHLFKELKNLNVLKAGHKEFQRLVQGSDDNEAALMTKLVEEVRSGDIVDHAVHE 616
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT-AEQYFSVLMMWHEI 570
WN++IH FCK + DA R L +M PN QT+ SLI Y +Y V +W E+
Sbjct: 617 WNNVIHFFCKKRLMHDAHRALNKMRASGHVPNAQTFHSLITAYAAIGGKYVEVTDLWGEM 676
Query: 571 KRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFME 630
K S+ +KF+ L+D+ LY V+GGFF M+V++ ++ ++F+DK+KYK +++
Sbjct: 677 KLLASSS---SMKFDQELLDSLLYCFVRGGFFLRAMEVIDMMEKREMFIDKYKYKSLWLK 733
Query: 631 NHKKLKVAKLRK----RNFKKMEALIAFKNWAGL 660
H+ L K K K+ EA I FK W GL
Sbjct: 734 YHRTLYKGKAPKVQTEAQLKRREAAIHFKKWIGL 767
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 16/251 (6%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
D+AW+++ P K V + LI L+ D H LK+++ V + E+ +LLD +
Sbjct: 98 DDAWRAYDKHVHMDGLPRKSVLSKLITGLAESCDPHRLKQSYNVVSHAFEEKQELLDKEP 157
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
+ L + + A +V+ + K + P W L +C+ N+ + E
Sbjct: 158 LIYLSLVLARCDLPNLAINVVRKLVKMEAYPPVAAWSAILAHMCQTNTGAFLGADLVMEL 217
Query: 205 CRIALDENLD----------FMKPNIYACNAALEGC-CYGLQSVSDAEKVIETMSVLGVR 253
+ + +D MKPN + N L +G + AE+++E M +GV+
Sbjct: 218 GYLFQNNRVDPRKKSNRPLLSMKPNSFTFNIVLTASLVFG--TTRKAEQLLELMPRIGVK 275
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEF-GFSSQMV--FYSSLISGYVKLGNLESA 310
P + +A++Y G +++I +L+ ++E G S FY L+S ++K G+L+ A
Sbjct: 276 PEVNLLIVMAHIYERNGRRDEIQKLKRHVDEACGLSESEFRQFYDCLLSCHLKFGDLDHA 335
Query: 311 SRTILLCLGGG 321
+L L G
Sbjct: 336 VDMVLDMLRKG 346
>gi|225439751|ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Vitis vinifera]
Length = 749
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 172/653 (26%), Positives = 287/653 (43%), Gaps = 72/653 (11%)
Query: 74 NLHKSLLT----NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASV 129
+L+++LLT T+EAW ++ T PS + L++ LS + L RA S+
Sbjct: 79 SLNQTLLTLLRQRKTEEAWLTYVQCTQ---LPSPTCLSRLVSQLSYQNTHQALTRA-QSI 134
Query: 130 VYVIEKNPKL--LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDI 187
+ + +L LD ++ L S A A +L+K M ++ Y + W + +
Sbjct: 135 IQRLRNERQLHRLDANSLGLLAVSAAKAGHTLYAASLIKSMLRSGYLPHVKAWSAVVSRL 194
Query: 188 CRKNSNF-VAFLKVFEECCRIA---LDENL-DFMKPNIYACNAALEGCCYGLQSVSDAEK 242
+ + LK+F+ R D L +P+ A NA L C L +
Sbjct: 195 AASGDDGPLEALKLFDSVTRRIHRFTDATLVADSRPDTAAYNAVLNACA-NLGDTKRFLQ 253
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV-ELESLMNEFGFSSQMVFYSSLISGY 301
V E M+ LG P+ ++ + L A ++ +V LE ++++ G M SL++ Y
Sbjct: 254 VFEEMTQLGAEPDVLTYNVMIKLCARVDRKDLLVFVLERILDK-GIQLCMTTLHSLVAAY 312
Query: 302 VKLGNLESASRTILLCLGG----------------GNMEQSDFSK--------------- 330
V G+LE+A + + G GN E F K
Sbjct: 313 VGFGDLETAEKLVQAMREGRQDLCKILRDVNSENPGNNEGYIFDKLLPNSVERNNSEPPL 372
Query: 331 ---------ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
Y ++KG+++ G V ++ + + S D ++SA V
Sbjct: 373 LPKAYAPDSRIYTTLMKGYMKEGRVTDTVRMLEAMRHQDDSTSQPDHVTYTTVVSALVKA 432
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD-ISSSGLQLDVGN 440
G D+A +L EM G Y LK YC++ + +A +LV + + G+ DV +
Sbjct: 433 GSMDRARQVLAEMTRIGVPANRVTYNILLKGYCEQLQIDKAKELVREMVDDEGIVPDVVS 492
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y+ LI+ I D A + F +MR I K SY T+M + +P+L DE++
Sbjct: 493 YNTLIDGCILVDDSAGALAYFNEMRARGIAPTKISYTTLMKAFALSGQPKLANKVFDEML 552
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
DPRV+V WN ++ A C+ G +E+AK+T++RM F PN TY SL NG A +
Sbjct: 553 RDPRVKVDLVAWNMLVEAHCRLGLVEEAKKTVQRMRENGFYPNVATYGSLANGIALARKP 612
Query: 561 FSVLMMWHEIKRK--------ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
L++W+E+K + IS +K + L+D V+ FF +++V
Sbjct: 613 GEALLLWNEVKERCVVKEEGEISKSSPPPLKPDEGLLDTLADICVRAAFFRKALEIVACM 672
Query: 613 QEMKVFVDKWKYKQAFMENHKKL----KVAKLRK-RNFKKMEALIAFKNWAGL 660
+E + +K KY + ++E H ++ +K R+ R ++ A AFK W GL
Sbjct: 673 EENGIPPNKSKYTRIYVEMHSRMFTSKHASKARQDRRSERKRAAEAFKFWLGL 725
>gi|222612848|gb|EEE50980.1| hypothetical protein OsJ_31564 [Oryza sativa Japonica Group]
Length = 800
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 186/359 (51%), Gaps = 17/359 (4%)
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK---------ET-YCEVVK 338
SQM+ Y S LE +R +L L EQ K ET Y ++VK
Sbjct: 396 SQMLNYISFFKDK-SFARLELDARELLKLLSDKLQEQVGLVKSEYGILYPTETMYAKLVK 454
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
FL+ + LA+ +++A K E S + V+ S +I+AC++LG ++AH +LDEM G
Sbjct: 455 AFLEANKISALASFLVKASK-EDSPVSVESSFVVQVINACISLGWLEQAHDLLDEMRFSG 513
Query: 399 CSVGLGVYVPTLKAYCKE-HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
VG +Y LKAYCKE H + L+ D +G+QLD Y+ LI++ + A
Sbjct: 514 IRVGSTIYSSLLKAYCKEGHHEDDIAALLKDAQQAGIQLDPSCYEDLIQSRAHHNNTTGA 573
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+LF++++ I + ++ N+ L ++EV V HDWN++IH
Sbjct: 574 LNLFKELKSLNILKAGQNEFEMLVQGCNNNGAALTTKLVEEVRSGHPVNHAIHDWNNVIH 633
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY-VTAEQYFSVLMMWHEIKRKIST 576
FCK + DA + L +M L PN QT+ SL+ GY +Y V +W E+K ++
Sbjct: 634 FFCKKRLMHDAHKALGKMKALGHTPNAQTFHSLVTGYAAVGGKYVEVTDLWGEMKVLATS 693
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKL 635
+ F+ L+D+ LY V+GGFF M+V+E ++ K+F+DK+KYK +++ H+ L
Sbjct: 694 S---SMNFDQELLDSLLYCFVRGGFFLRAMEVIEMMEKGKMFIDKYKYKSLWLKYHRTL 749
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 191/485 (39%), Gaps = 74/485 (15%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
D+AW++++ P K V + LI + D H L +++ V + E+ KLL+ +
Sbjct: 103 DDAWRAYEKHIHMDGVPRKSVLSKLITGFAETCDAHWLNQSYNVVNHAFEEKSKLLEKEP 162
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSN-FVAFLKVFEE 203
+ L ++ ++ + +V+ + K + P W + +C+ + F+A V E
Sbjct: 163 LIFLSLALARSSLPNLSINVVRKLIKMEAYPPVAAWSAIVAHMCQTATGAFLAADMVMEI 222
Query: 204 C---------CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
R + L MKPN N L + AE+++E M +G++P
Sbjct: 223 GYLFQNNRVDPRKKSNRPLLLMKPNSLTFNIILTASLL-FGTTKKAEQLLELMPRIGLKP 281
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEF-GFSSQMV--FYSSLISGYVKLGNLESAS 311
+ SS +A +Y G +++I +L +NE G S + FY L+S ++K G+L+SA
Sbjct: 282 DVSSLIVMARIYEQNGHRDEIQKLRRHVNEACGLSESELRQFYDCLLSCHLKFGDLDSAV 341
Query: 312 RTILLCL-GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
IL L G N ++S + + E V+ + + +K +P
Sbjct: 342 DMILDMLKKGKNTKRSLEAAKAVLEAVEN----------NKIYLPYEKTKP--------- 382
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
VN G S+ K+ C + + D S
Sbjct: 383 --------VNSGSSN-------------------------KSVCTDSQMLNYISFFKDKS 409
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
+ L+LD L+ S Q L + +Y + Y ++ +E ++
Sbjct: 410 FARLELDARELLKLL-----SDKLQEQVGLVKS-EYGILYPTETMYAKLVKAFLEANKIS 463
Query: 491 LMAAFLDEVV-EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+A+FL + ED V V++ +I+A G LE A L M F Y S
Sbjct: 464 ALASFLVKASKEDSPVSVESSFVVQVINACISLGWLEQAHDLLDEMRFSGIRVGSTIYSS 523
Query: 550 LINGY 554
L+ Y
Sbjct: 524 LLKAY 528
>gi|218184544|gb|EEC66971.1| hypothetical protein OsI_33631 [Oryza sativa Indica Group]
Length = 800
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 186/359 (51%), Gaps = 17/359 (4%)
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK---------ET-YCEVVK 338
SQM+ Y S LE +R +L L EQ K ET Y ++VK
Sbjct: 396 SQMLNYISFFKDK-SFARLELDARELLKLLSDKLQEQVGLVKSEYGILYPTETMYAKLVK 454
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
FL+ + LA+ +++A K E S + V+ S +I+AC++LG ++AH +LDEM G
Sbjct: 455 AFLEANKISALASFLVKASK-EDSPVSVESSFVVQVINACISLGWLEQAHDLLDEMRFSG 513
Query: 399 CSVGLGVYVPTLKAYCKE-HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
VG +Y LKAYCKE H + L+ D +G+QLD Y+ LI++ + A
Sbjct: 514 IRVGSTIYSSLLKAYCKEGHHEDDIAALLKDAQQAGIQLDPSCYEDLIQSRAHHNNTTGA 573
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+LF++++ I + ++ N+ L ++EV V HDWN++IH
Sbjct: 574 LNLFKELKSLNILKAGQNEFEMLVQGCNNNGAALTTKLVEEVRSGHPVNHAIHDWNNVIH 633
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY-VTAEQYFSVLMMWHEIKRKIST 576
FCK + DA + L +M L PN QT+ SL+ GY +Y V +W E+K ++
Sbjct: 634 FFCKKRLMHDAHKALGKMKALGHTPNAQTFHSLVTGYAAVGGKYVEVTDLWGEMKVLATS 693
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKL 635
+ F+ L+D+ LY V+GGFF M+V+E ++ K+F+DK+KYK +++ H+ L
Sbjct: 694 S---SMNFDQELLDSLLYCFVRGGFFLRAMEVIEMMEKGKMFIDKYKYKSLWLKYHRTL 749
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 191/485 (39%), Gaps = 74/485 (15%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
D+AW++++ P K V + LI + D H L +++ V + E+ KLL+ +
Sbjct: 103 DDAWRAYEKHIHMDGVPRKSVLSKLITGFAETCDAHWLNQSYNVVNHAFEEKSKLLEKEP 162
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSN-FVAFLKVFEE 203
+ L ++ ++ + +V+ + K + P W + +C+ + F+A V E
Sbjct: 163 LIFLSLALARSSLPNLSINVVRKLIKMEAYPPVAAWSAIVAHMCQTATGAFLAADMVMEI 222
Query: 204 C---------CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
R + L MKPN N L + AE+++E M +G++P
Sbjct: 223 GYLFQNNRVDPRKKSNRPLLLMKPNSLTFNIILTASLL-FGTTKKAEQLLELMPRIGLKP 281
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEF-GFSSQMV--FYSSLISGYVKLGNLESAS 311
+ SS +A +Y G +++I +L +NE G S + FY L+S ++K G+L+SA
Sbjct: 282 DVSSLIVMARIYEQNGHRDEIQKLRRHVNEACGLSESELRQFYDCLLSCHLKFGDLDSAV 341
Query: 312 RTILLCL-GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
IL L G N ++S + + E V+ + + +K +P
Sbjct: 342 DMILDMLKKGKNTKRSLEAAKAVLEAVEN----------NKIYLPYEKTKP--------- 382
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
VN G S+ K+ C + + D S
Sbjct: 383 --------VNSGSSN-------------------------KSVCTDSQMLNYISFFKDKS 409
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
+ L+LD L+ S Q L + +Y + Y ++ +E ++
Sbjct: 410 FARLELDARELLKLL-----SDKLQEQVGLVKS-EYGILYPTETMYAKLVKAFLEANKIS 463
Query: 491 LMAAFLDEVV-EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+A+FL + ED V V++ +I+A G LE A L M F Y S
Sbjct: 464 ALASFLVKASKEDSPVSVESSFVVQVINACISLGWLEQAHDLLDEMRFSGIRVGSTIYSS 523
Query: 550 LINGY 554
L+ Y
Sbjct: 524 LLKAY 528
>gi|302797571|ref|XP_002980546.1| hypothetical protein SELMODRAFT_113055 [Selaginella moellendorffii]
gi|300151552|gb|EFJ18197.1| hypothetical protein SELMODRAFT_113055 [Selaginella moellendorffii]
Length = 636
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 143/600 (23%), Positives = 269/600 (44%), Gaps = 27/600 (4%)
Query: 77 KSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVV-YVIEK 135
++LL T++A + L FPS+ ++LI+ L+ Q +L +A + V +
Sbjct: 7 RALLERRTEDAVFAVDGLRRKGSFPSRDSLSTLISQLAYKQTPLSLSQADRLIQDLVASR 66
Query: 136 NPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD----ICR-- 189
LLD ++ L + A + + ++ MF+ + P +W +V+ + R
Sbjct: 67 REDLLDQNSLSLLALAYAGVGMANFSRSTLRLMFQTGLYPPVRVWTAVMVEEPDPVARII 126
Query: 190 KNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
K +F K EE L M+P++ + N+AL C L +AE++ +MS+
Sbjct: 127 KLMDFAMMPKGNEEL--------LVSMRPDVTSFNSALR-ICATLADTQNAEEIFHSMSL 177
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
GV PN SF L +Y + ++ M +LI YV+ GN+E
Sbjct: 178 FGVLPNSDSFELLIKVYGKARRFDLFRKVPQRMEAACVRPSASTLKALIDAYVESGNIEE 237
Query: 310 ASRTILLCLGGGN--MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A + + + G + + Y ++K + + ANL+ + LE +G +D
Sbjct: 238 AEKVLQKTVQGKSSLWNLVKLEGDVYNSLLKAYALEARLSDAANLL-SSVPLEDAGTGLD 296
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
++ ++++ + G+ + SIL M V Y + +C ++ +A ++
Sbjct: 297 QA---RVVASMIASGMLKEICSILQYMLQHRMEVSFSAYKSLMHGFCANNQLDKAASFII 353
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ +G++ D Y LI+ + +D A+ F +M EARI + +Y++++ L
Sbjct: 354 LMKRAGIKPDCSIYGPLIQGLVRCRDRLLAYHTFLEMVEARIVPDEATYVSLLKALTVEE 413
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
R M L+ V+E P V++ WN +I K + DA+R L RM +P+ +Y
Sbjct: 414 RASKMVRVLEAVMEFPSVKISLFSWNLVIEYCSKKKLIGDAQRMLARMAPAGVQPDSYSY 473
Query: 548 LSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQ 607
++ G +T + VL +W +I+ D I LV+ +YA VKG F ++
Sbjct: 474 WYVVKGLITRSRLTDVLGLWPQIQFASRRDRPNRIILHKQLVETLMYAFVKGANFAQALE 533
Query: 608 VVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRK--RNFKKMEALI---AFKNWAGLNA 662
++E ++E + +D+ +K F++ H +K + R + + + L+ FK W L A
Sbjct: 534 LLEYAKEEDIPLDREAFKDLFLKYHSHRFTSKHKSPLRVYGRQQQLLEMEEFKKWLSLGA 593
>gi|449440377|ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
gi|449483612|ref|XP_004156638.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
Length = 736
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 155/645 (24%), Positives = 276/645 (42%), Gaps = 74/645 (11%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL--LD 141
TDEAW ++ T + PS + L++ LS +L RA S++ + ++ +L LD
Sbjct: 80 TDEAWITY---TQCNDLPSPTCLSRLVSQLSYQNTPSSLTRA-QSILTRLRQDNQLHRLD 135
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVA----- 196
++ L + A A +++K M ++ Y + W + + + A
Sbjct: 136 ANSLGLLAVAAAKAGHTLYACSVIKSMLRSGYLPHVKAWSAVVSRLAASPDDGPAEAIKL 195
Query: 197 FLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
F V + R A +P+ A N L C + + ++ E M G P+
Sbjct: 196 FSLVTQRLRRFADPTITADSRPDTAAYNGVLNACA-NMGAYEKFLQLFEEMEEFGAEPDV 254
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS----- 311
++ + L A ++ IV + + M S+++ YV G+LE+A
Sbjct: 255 LTYNVMIKLCARANRKDLIVYVLEAILAKDIPMCMTTLHSVVAAYVGFGDLETAEKVVQA 314
Query: 312 -----RTILLCLGGGNMEQ----SDFSKE------------------------------- 331
R I L G +++ D +++
Sbjct: 315 MREGKRDICRILRDGYLDEIEDVEDLNEDEDELFKKLLPNLNEEIDSEPPLLPKIYSPNS 374
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHS 389
Y ++KG++ G V G ++EA + + V + ++SA V G D+A
Sbjct: 375 RIYTTLMKGYMNEGRV-GDTIRMLEAMRNQGDRSSHPDHVSYTTVVSALVKAGSMDRARQ 433
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD-ISSSGLQLDVGNYDALIEAS 448
+L EM GC Y LK YC+ + +A L + + +G++ DV +Y+ +I+ S
Sbjct: 434 VLAEMTRIGCPANRITYNILLKGYCRLLQMDKAKDLFKEMVDGAGIEPDVVSYNIMIDGS 493
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
I D A F +MR I K SY T+M ++ +P+L DE++ DPRV+V
Sbjct: 494 ILVDDSAGALGFFNEMRSKGIAPTKVSYTTLMKAFAQSGQPKLARKVFDEMLNDPRVKVD 553
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
WN +I +C+ G +E+AK+ +++M F P+ TY SL NG A + L++W+
Sbjct: 554 IVAWNMLIEGYCRLGWIEEAKQLVQKMKENGFFPDVSTYGSLANGISLARKPGEALLLWN 613
Query: 569 EIKRKIS--------TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
E+K + + + +K + L+D V+ FF +++V +E + +
Sbjct: 614 EVKERCAVRRGYKSDSSSPPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 673
Query: 621 KWKYKQAFMENHKKLKVAK-----LRKRNFKKMEALIAFKNWAGL 660
K KY + ++E H ++ +K + R +K A AFK W GL
Sbjct: 674 KTKYSRIYVEMHSRMFTSKHASKARQDRRIEKKRAAEAFKFWLGL 718
>gi|224126605|ref|XP_002329596.1| predicted protein [Populus trichocarpa]
gi|222870305|gb|EEF07436.1| predicted protein [Populus trichocarpa]
Length = 701
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 155/675 (22%), Positives = 287/675 (42%), Gaps = 131/675 (19%)
Query: 71 LETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVV 130
L L +L + DEAW +F FP+ + N LI+ LS D+H L++A V
Sbjct: 74 LLRKLEIALREHQVDEAWVTFIDFKKLYGFPTGSMVNMLISRLSYSSDHHWLQKACDLVF 133
Query: 131 YVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRK 190
++++ P LL F + L S+ A PA +++ M + P + + + +
Sbjct: 134 LILKEKPGLLQFPVLTKLSISLARAQMPVPASMILRVMLERENMPPLTILWSVVSHMVKT 193
Query: 191 N------SNFVAFLKVFEEC-CRIALDE----NLDFMKPNIYACNAALEGCCYGLQSVSD 239
SNF+ + C C + L +KP+ N L+ C +S
Sbjct: 194 EIGACLASNFLV-----QMCDCFLHLSAKGSVRAKVVKPDAMIFNLVLDACV-KFKSSLK 247
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG---FSSQMVFYSS 296
++++E MS GV + S + ++ + G +++I +L+ ++E G FY S
Sbjct: 248 GQEIVELMSKAGVIADAHSVIIFSQIHEMNGQRDEIKKLKDHVDEVGAPFIGYYCQFYDS 307
Query: 297 LISGYVKLGNLESAS-----------------------RTILLCLGGGNME--------- 324
L+ + K +++SA+ + +L+ +G N++
Sbjct: 308 LLKLHFKFDDIDSAAQLLLDMHKFQESVPNKKLRMDQEKRLLVPIGSNNLKTGLKIQVMP 367
Query: 325 ---QSD--------------------FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
Q D S ++V G+ ++G L+ L++ Q +
Sbjct: 368 ELLQKDSILTVKHKQELVMFRSGKLLLSNRALAKLVNGYRRHGRTTDLSKLLLCMQ--QD 425
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY-CKEHRTA 420
++ S +I AC+ LG + AH ILD+M+A G +G +++ L AY C+E
Sbjct: 426 FHVLGQSSFCSDVIDACIRLGWLEMAHDILDDMDAAGAPIGSTLHMALLTAYYCREM--- 482
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA----RIYDLKGSY 476
F+ A +L R MR+A + D +
Sbjct: 483 ---------------------------------FKEAKALLRKMRKAGFVVNLSDEMVAT 509
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT-----HDWNSIIHAFCKAGRLEDAKRT 531
+ + +D ++ + R E K ++ NS I+ FCKA +EDA +T
Sbjct: 510 ACLSEAANNASSSSSKSDLIDFLIREMREEEKAIPSVGYELNSSIYYFCKAKMMEDALKT 569
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDA 591
+RM ++ +P QT+ LI+G+ + Y + ++W +IKR + G K ++ +L +
Sbjct: 570 YKRMQHMKIQPTVQTFSYLIDGFSSLGMYRDITILWGDIKRNV---GSKDLEVSRDLYEV 626
Query: 592 FLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHK----KLKVAKLR-KRNFK 646
++GG+F+ M+V+ +E ++ DKW YK F++ HK LK ++ R + K
Sbjct: 627 LHLNFLRGGYFERAMEVIGYMKERNMYCDKWMYKDEFLKLHKNLYRSLKASEARTEAQSK 686
Query: 647 KMEALIAFKNWAGLN 661
++E + AF+ W G++
Sbjct: 687 RLEHVKAFRKWVGID 701
>gi|302790097|ref|XP_002976816.1| hypothetical protein SELMODRAFT_105853 [Selaginella moellendorffii]
gi|300155294|gb|EFJ21926.1| hypothetical protein SELMODRAFT_105853 [Selaginella moellendorffii]
Length = 636
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 141/600 (23%), Positives = 268/600 (44%), Gaps = 27/600 (4%)
Query: 77 KSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVV-YVIEK 135
++LL T++A + L FPS+ ++LI+ L+ Q +L +A + V +
Sbjct: 7 RALLERRTEDAVFAVDGLRRKGSFPSRDSLSTLISQLAYKQTPLSLSQADRLIQDLVASR 66
Query: 136 NPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD----ICR-- 189
LLD ++ L + A + + ++ MF+ + +W +V+ + R
Sbjct: 67 REDLLDQNSLSLLALAYAGVGMANFSRSTLRLMFQTGLYPSVRVWTAVMVEEPDPVARII 126
Query: 190 KNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
K +F K EE L M+P++ + N+AL C L +AE++ +MS+
Sbjct: 127 KLMDFAMMPKGNEEL--------LVSMRPDVTSFNSALR-ICATLADTQNAEEIFHSMSL 177
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
GV PN SF L +Y + ++ M +L+ YV+ GN+E
Sbjct: 178 FGVLPNSDSFELLIKVYGKARRFDLFRKVPQRMEAACVRPSASTLKALVDAYVESGNIEE 237
Query: 310 ASRTILLCLGGGN--MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A + + + G + + Y ++K + + ANL+ + LE +G +D
Sbjct: 238 AEKVLQKTVQGKSSLWNLVKLEGDVYNSLLKAYALEARLSDAANLL-SSVPLEDAGTGLD 296
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
++ ++++ + G+ + SIL M V Y + +C ++ +A ++
Sbjct: 297 QA---RVVASMIASGMLKEICSILQYMLQHRMEVSFSAYKSLMHGFCANNQLDKAASFII 353
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ +G++ D Y LI+ + +D A+ F +M EARI + +Y++++ L
Sbjct: 354 LMKRAGIKPDCSIYGPLIQGLVRCRDRLLAYHTFLEMVEARIVPDEATYVSLLKALTVEE 413
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
R M L+ V+E P V++ WN +I K + DA+R L RM +P+ +Y
Sbjct: 414 RASKMVRVLEAVMEFPSVKISLFSWNLVIEYCSKKKLIGDAQRMLARMAPAGVQPDSYSY 473
Query: 548 LSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQ 607
++ G +T + VL +W +I+ D I LV+ +YA VKG F ++
Sbjct: 474 WYVVKGLITRSRLTDVLGLWPQIQFASRRDRPNRIILHKQLVETLMYAFVKGANFAQALE 533
Query: 608 VVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRK--RNFKKMEALI---AFKNWAGLNA 662
++E ++E + +D+ +K F++ H +K + R + + + L+ FK W L A
Sbjct: 534 LLEYAKEEDIPLDREAFKDLFLKYHSHRFTSKHKSPLRVYGRQQQLLEMEEFKKWLSLGA 593
>gi|62320586|dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]
Length = 778
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 170/346 (49%), Gaps = 18/346 (5%)
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++KG+++NG V A ++ ++ + D ++SA VN GL D+A +L
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS-SSGLQLDVGNYDALIEASITS 451
EM G Y LK YCK+ + A L+ +++ +G++ DV +Y+ +I+ I
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
D A + F +MR I K SY T+M + +P+L DE++ DPRV+V
Sbjct: 537 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIA 596
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
WN ++ +C+ G +EDA+R + RM F PN TY SL NG A + L++W EIK
Sbjct: 597 WNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIK 656
Query: 572 RKISTDGQKG------------IKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFV 619
+ + ++ +K + L+D V+ FF ++++ +E +
Sbjct: 657 ERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPP 716
Query: 620 DKWKYKQAFMENHKKLKVAKLRK-----RNFKKMEALIAFKNWAGL 660
+K KYK+ ++E H ++ +K R ++ A AFK W GL
Sbjct: 717 NKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGL 762
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 94/242 (38%), Gaps = 10/242 (4%)
Query: 79 LLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVI-EKNP 137
L TDEAW + ++ P + L++ LS +L RA + + + E+
Sbjct: 92 LRNRKTDEAWAKY---VQSTHLPGPTCLSRLVSQLSYQSKPESLTRAQSILTRLRNERQL 148
Query: 138 KLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSN---- 193
LD ++ L + + A +++K M ++ + W + + N
Sbjct: 149 HRLDANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGCLPHVKAWTAAVASLSASGDNGPEE 208
Query: 194 -FVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
F+ + R + +P+ A NA L C L K+ E MS
Sbjct: 209 SIKLFIAITRRVKRFGDQSLVGQSRPDTAAFNAVLNACA-NLGDTDKYWKLFEEMSEWDC 267
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
P+ ++ + L A G +E IV + + + G M SL++ YV G+L +A R
Sbjct: 268 EPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAER 327
Query: 313 TI 314
+
Sbjct: 328 IV 329
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 204 CCRIALDENLDFMK---------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
C ++ +D D ++ P++ + N ++GC + + A M G+ P
Sbjct: 498 CKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCIL-IDDSAGALAFFNEMRTRGIAP 556
Query: 255 NESSFGFLAYLYALKGLQEKIVE--LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+ S+ L +A+ G Q K+ + +MN+ ++ ++ L+ GY +LG +E A R
Sbjct: 557 TKISYTTLMKAFAMSG-QPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQR 615
Query: 313 TI 314
+
Sbjct: 616 VV 617
>gi|15232734|ref|NP_187576.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09650, chloroplastic; AltName: Full=Protein HIGH
CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical protein [Arabidopsis thaliana]
gi|332641272|gb|AEE74793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 778
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 170/346 (49%), Gaps = 18/346 (5%)
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++KG+++NG V A ++ ++ + D ++SA VN GL D+A +L
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS-SSGLQLDVGNYDALIEASITS 451
EM G Y LK YCK+ + A L+ +++ +G++ DV +Y+ +I+ I
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
D A + F +MR I K SY T+M + +P+L DE++ DPRV+V
Sbjct: 537 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIA 596
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
WN ++ +C+ G +EDA+R + RM F PN TY SL NG A + L++W EIK
Sbjct: 597 WNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIK 656
Query: 572 RKISTDGQKG------------IKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFV 619
+ + ++ +K + L+D V+ FF ++++ +E +
Sbjct: 657 ERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPP 716
Query: 620 DKWKYKQAFMENHKKLKVAKLRK-----RNFKKMEALIAFKNWAGL 660
+K KYK+ ++E H ++ +K R ++ A AFK W GL
Sbjct: 717 NKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGL 762
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 204 CCRIALDENLDFMK---------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
C ++ +D D ++ P++ + N ++GC + + A M G+ P
Sbjct: 498 CKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCIL-IDDSAGALAFFNEMRTRGIAP 556
Query: 255 NESSFGFLAYLYALKGLQEKIVE--LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+ S+ L +A+ G Q K+ + +MN+ ++ ++ L+ GY +LG +E A R
Sbjct: 557 TKISYTTLMKAFAMSG-QPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQR 615
Query: 313 TI 314
+
Sbjct: 616 VV 617
>gi|356536919|ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Glycine max]
Length = 716
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 173/343 (50%), Gaps = 14/343 (4%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
TY ++KG++ G V ++ ++L+ G D ++SA V +G D+A +L
Sbjct: 349 TYTTLMKGYMNAGRVSDTVRMLEAMRRLDDKGSQPDHVSYTTVVSALVKVGAMDRARQVL 408
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD-ISSSGLQLDVGNYDALIEASIT 450
EM G L Y LK YCK+ + +A +L+ + + +G+Q DV +Y+ LI+ I
Sbjct: 409 AEMTRIGVPANLITYNVLLKGYCKQLQIDKARELLKEMVDDAGIQPDVVSYNILIDGCIL 468
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
D A S F +MR I K SY T+M + +P+L +E+ DPRV+V
Sbjct: 469 VDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAYSGQPKLAHRVFNEMDSDPRVKVDLI 528
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
WN ++ +C+ G +E+AK+ +++M F P+ TY SL NG A + L++W+E+
Sbjct: 529 AWNMLVEGYCRLGLVEEAKKVVQKMKESGFHPDVGTYGSLANGIALARKPGEALLLWNEV 588
Query: 571 KRKISTDGQKG--------IKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKW 622
K + + G +K + L+D V+ FF +++V +E + +K
Sbjct: 589 KERCEVGKEGGKSDSSVPPLKPDGALLDTIADICVRAAFFRKALEIVACMEENGIPPNKT 648
Query: 623 KYKQAFMENHKKLKVAK--LRKRNFKKME---ALIAFKNWAGL 660
K+ + ++E H ++ +K R R +++E A AFK W GL
Sbjct: 649 KFTRIYVEMHSRMFTSKHASRARQDRRVERKRAAEAFKFWLGL 691
>gi|297829500|ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata]
gi|297328472|gb|EFH58891.1| HCF152 [Arabidopsis lyrata subsp. lyrata]
Length = 772
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 168/346 (48%), Gaps = 18/346 (5%)
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++KG+++NG V A ++ ++ + D ++SA V GL D+A +L
Sbjct: 411 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVKAGLMDRARQVLA 470
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS-SSGLQLDVGNYDALIEASITS 451
EM G Y LK YCK+ + A L+ +++ +G++ DV +Y+ +I+ I
Sbjct: 471 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMAEDAGIEPDVVSYNIIIDGCILI 530
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
D A + F +MR I K SY T+M + +P+L DE++ DPRV+V
Sbjct: 531 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIA 590
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
WN ++ +C+ G +EDA+R + RM F PN TY SL NG A + L++W EIK
Sbjct: 591 WNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSLARKPGEALLLWKEIK 650
Query: 572 RKISTDGQKG------------IKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFV 619
+ ++ +K + L+D V+ FF ++++ +E +
Sbjct: 651 ERCEVKKKEAPSDSSSDPSPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPP 710
Query: 620 DKWKYKQAFMENHKKLKVAKLRK-----RNFKKMEALIAFKNWAGL 660
+K KYK+ ++E H ++ +K R ++ A AFK W GL
Sbjct: 711 NKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGL 756
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 204 CCRIALDENLDFMK---------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
C ++ +D D ++ P++ + N ++GC + + A M G+ P
Sbjct: 492 CKQLQIDRAEDLLREMAEDAGIEPDVVSYNIIIDGCIL-IDDSAGALAFFNEMRTRGIAP 550
Query: 255 NESSFGFLAYLYALKGLQEKIVE--LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+ S+ L +A+ G Q K+ + +MN+ ++ ++ L+ GY +LG +E A R
Sbjct: 551 TKISYTTLMKAFAMSG-QPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQR 609
Query: 313 TI 314
+
Sbjct: 610 VV 611
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%)
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
+++AC NLG ++K + DEM+ C + Y +K + R ++ I
Sbjct: 234 AVLNACANLGDTEKYWKLFDEMSEWDCEPDVLTYNVMIKLCARVDRKELIVYVLERIIDK 293
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
G+++ + +L+ A + D ++A + + MRE R
Sbjct: 294 GIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKR 329
>gi|326502598|dbj|BAJ98927.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 733
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 152/661 (22%), Positives = 277/661 (41%), Gaps = 92/661 (13%)
Query: 45 SLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKP 104
S+ PP S T + D + +L L TD A++ F A+ P P
Sbjct: 47 SISPAPPLSTTHEDD------DALLAL-------LRAGETDAAYRLF---AASPSLPESP 90
Query: 105 VTNS-LIAHLS-SLQDNHNLKRAFASVVYVIEKNP--KLLDFQTVHTLLGSMRNANTAAP 160
S L+A LS +H+ RA A +++ + LLD ++ + + +A
Sbjct: 91 TAASRLLAQLSYRSTSSHSFSRA-AGLLHRLRAQGGLNLLDANSLSLAASAAARSGSAHL 149
Query: 161 AFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNI 220
A++L+ M + R +P + R F V R + F P+
Sbjct: 150 AYSLLLSMLR-RGLLPDRRAYTAAISRLRPAHALRLFDAVLHHLRRAPDSASPSFALPDT 208
Query: 221 YACNAALEGC-----CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
A NA L C C + + D E S P+ ++ + A G ++ +
Sbjct: 209 AAFNAVLSACADAGDCRRFRQLFD-----EMRSWPSAAPDALTYNVAIKMCARAGRRDLV 263
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG--------------G 321
+ + G + + SL++ YV G++ +A R + G G
Sbjct: 264 ARVLERILSSGIAPCATTFHSLVAAYVGFGDIPTAERIVQAMREGRSDVCLLLRHVAVEG 323
Query: 322 NMEQ----------SDF------------------------SKETYCEVVKGFLQNGNVK 347
N E+ SD + Y ++KG++ G V
Sbjct: 324 NDEKGIAVIVVDEHSDVLEDIVGPKPEEGSEVPLLSRTYPPNSRVYTTLMKGYMNAGRVD 383
Query: 348 GLANLIIEAQKLEPSGIVV-----DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
+++ A+ + G + D ++S G ++AH++LDEM G
Sbjct: 384 ---DVVAMARAMRREGETMPASRPDHVTYTTVVSTLAAAGDMERAHAVLDEMARAGVPAS 440
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISS-SGLQLDVGNYDALIEASITSQDFQSAFSLF 461
Y +K YC++ + + A +L+ ++++ +G++ DV Y+ LI+ + D A +LF
Sbjct: 441 RVTYNVLIKGYCQQLQMSRARELLEEMTTDAGIEADVVTYNTLIDGCVLMDDSAGALALF 500
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
+MR + SY T+M + +P++ +E+ +DPRV V WN ++ +C+
Sbjct: 501 NEMRARGVAPSTVSYTTLMKAFAASGQPKVAHNVFEEMEKDPRVTVDRPAWNMLVEGYCQ 560
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI---STDG 578
G LE AK+T+ RM +P+ TY SL G A + L++W+E+K + S +G
Sbjct: 561 QGMLETAKQTVERMKESGVQPDVATYGSLAKGIAVARKPGEALLLWNEVKERCEAGSGNG 620
Query: 579 QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVA 638
+ G++ + L+DA V+G FF +++V +E + +K KYK+ ++E H ++ +
Sbjct: 621 KPGLRPDEELLDALADVCVRGAFFKKALEIVACMEENGIAPNKTKYKKIYIEMHSRMFTS 680
Query: 639 K 639
K
Sbjct: 681 K 681
>gi|255568420|ref|XP_002525184.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535481|gb|EEF37150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 740
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 153/678 (22%), Positives = 283/678 (41%), Gaps = 101/678 (14%)
Query: 50 PPNSPTQQQQQQTLTQDNIT-SLETNLHKSLLT----NNTDEAWKSFKSLTANSLFPSKP 104
P PT+Q + T T +++ + TN ++LL+ TD+AW + + + L P+
Sbjct: 34 PTKKPTRQFRLYTATTPDLSLTTATNNDQTLLSLLRQRETDKAWIFY---SQSPLLPNPT 90
Query: 105 VTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL--LDFQTVHTLLGSMRNANTAAPAF 162
+ L++ LS +L RA S++ + + +L LD ++ L S + + A
Sbjct: 91 CLSRLVSQLSYQNTPLSLSRA-QSILTRLRQERQLHRLDANSLGLLAVSATKSGQLSYAV 149
Query: 163 ALVKCMFKNRYFMPFELWGGFLVDICR-KNSNFVAFLKVFEECCR---------IALDEN 212
+L+ M ++ Y + W + + + +K+F R + D N
Sbjct: 150 SLINSMLRSGYLPHVKAWSAVISRLSSSPDDGPQQAIKLFNSITRRVRRFNDAALVADSN 209
Query: 213 LDFMKPNIYACNAALEGCCYGLQSVSDAE---KVIETMSVLGVRPNESSFGFLAYLYALK 269
P+ A N+ L C ++ D + ++ + MS G P+ ++ + L A
Sbjct: 210 -----PDTAAFNSVLNACA----NLGDGKMFLQLFDQMSEFGAEPDILTYNVMIKLCARC 260
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS----------RTILLCLG 319
++ +V + + + M SL++ YV G+LE+A R + L
Sbjct: 261 DRKDLLVFVLERVIQKRIPLCMTTLHSLVAAYVGFGDLETAEIMAQAMREGRRDLCKILR 320
Query: 320 GGNMEQSDFSKE----------------------------------------------TY 333
NME + E Y
Sbjct: 321 EVNMEDLGYYGEDVIENSQRLDQNRKNMFVFEKLLPNSIQSGDTEPSLLPKVYAPDSRIY 380
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++KG++ G V ++ + + + D +ISA V G D+A +L E
Sbjct: 381 TTLMKGYMNQGRVSDTIRMLEAMRHQDDNASHPDHVSYTTVISALVKAGSMDRARQVLAE 440
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG-LQLDVGNYDALIEASITSQ 452
M G Y LK +C+ + +A +L+ ++ + ++ DV +Y+ +I+ I
Sbjct: 441 MTRIGVPANRITYNILLKGHCQHLQIDKAKELLKEMDENAEIEPDVVSYNTMIDGCIQVD 500
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
D A + F +MRE I K SY T+M + +P+L DE+ +DPRV+V W
Sbjct: 501 DSAGALAFFNEMREKGIAPTKISYTTLMKAFSLSGQPKLANQVFDEMFKDPRVKVDLIAW 560
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
N ++ A+CK G +E AK+ ++RM F PN TY SL +G A + L++W+E+K
Sbjct: 561 NVLVEAYCKLGLVEQAKKIIQRMKENGFHPNVATYGSLASGIALARKPGEALILWNEVKE 620
Query: 573 KISTDGQ-----------KGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
++ + K + ++D V+ F +++V +E +F +K
Sbjct: 621 RLEMQKEGHNSKSDLPPPPAFKPDEGMLDTLADICVRAALFQKALEIVACMEENGIFPNK 680
Query: 622 WKYKQAFMENHKKLKVAK 639
KYK+ ++E H ++ +K
Sbjct: 681 MKYKKIYVEMHSRMFTSK 698
>gi|357116839|ref|XP_003560184.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g17616-like [Brachypodium distachyon]
Length = 682
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 148/648 (22%), Positives = 279/648 (43%), Gaps = 95/648 (14%)
Query: 78 SLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNP 137
+L N D+A ++F + + P + NS+I LS L+RA+ V+ V + N
Sbjct: 64 ALKDGNVDQALQAFGNYKSLHGLPEPRILNSVIVSLSYTSSRRWLQRAYDMVLSVYQSNG 123
Query: 138 KLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAF 197
LL+ ++ L ++ T PA A+++ M ++ ++ + + +
Sbjct: 124 NLLNCSSLMRLALALARDQTPVPASAVLRIMLESGKLPDADMLSMVFLHMLKSQVGSYLA 183
Query: 198 LKVFEECCRIALDE--------NLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
+ V E C L + LD +K N+ N LE C + + A+K++E MS+
Sbjct: 184 VDVLAETCECFLHQISDRRQLKKLDPIKNNVALFNMVLESC-VNFKCMIKAQKIMELMSL 242
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG----FSSQMVFYSSLISGYVKLG 305
+GV + ++ + + + G +++++ ++ + F F + Y SL++ + K
Sbjct: 243 VGVVADVNTMVIASRVCEMVGQRDELMSMKRSIESFSSSPFFQHYLQLYDSLLNLHFKCN 302
Query: 306 NLESASRTI---------------------LLCLGGGNMEQSDFSKETYCEVVKGFLQNG 344
++E+A+ + ++ +G N++ ++ KGF +
Sbjct: 303 DMEAAANFVTALHRIQKSCVSFCDGLQKQGMIQIGSANLKTGYRIMFDPTKLDKGFSLDS 362
Query: 345 NV----------------KGLANLII---EAQKLEPSG---IVVDRSVGFGI-----ISA 377
+ K LA LII +A KL I + + GI I+A
Sbjct: 363 KIQFGLLVSIDGKFLPSEKALAKLIIGCVKAAKLNTLSMFCITLHKEDIKGISASDVINA 422
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
C+ +G AH ILD + + VG+G Y+ L+AY KE + E
Sbjct: 423 CIQMGWLQAAHDILDALESAEIPVGIGTYMSLLRAYEKEQKPNE---------------- 466
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
+D L++ Q S+ F I D+ I M + L+++ ++
Sbjct: 467 ---FDGLLQ---QIQKMASSMPEFHTSPSFTIKDIA----KIAKDEMPQTKSSLLSSLVE 516
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
E + T ++N+ + FC A +EDA T +RM PN T+ ++ GY +
Sbjct: 517 ETEHYNPGDHLTFEFNNSVRFFCMAKMMEDALSTYKRMREQNIRPNLHTFCHILCGYSSL 576
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
+ + ++W EIKR++ + + +L+D + +KGG+F VM+V+ V
Sbjct: 577 GMHREITILWGEIKRRLE---HGELCVDRDLLDCLVLDFLKGGYFSRVMEVINYMSTHNV 633
Query: 618 FVDKWKYKQAFMENHKKL-----KVAKLRKRNFKKMEALIAFKNWAGL 660
+ DKWKY+Q F++ HK L + + K++E + AF++WAG+
Sbjct: 634 YCDKWKYRQVFLKLHKNLYRNLNSLHDKTEAQSKRIEDVQAFRSWAGI 681
>gi|115486864|ref|NP_001065238.1| Os12g0102600 [Oryza sativa Japonica Group]
gi|113648426|dbj|BAF28938.1| Os12g0102600, partial [Oryza sativa Japonica Group]
Length = 712
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 211/465 (45%), Gaps = 54/465 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ A NAAL C + + + M P+ ++ L + A G ++ +
Sbjct: 216 PDTAAFNAALSACANAGDCIR-FRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKDLVAR 274
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL--------LCL-----GGGNM- 323
+ + G + + SL++ YV G++ +A R + +CL ++
Sbjct: 275 VLHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIVQAMRERRTDICLLFRAVADDHII 334
Query: 324 ----------------EQSDF---------SKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
EQ + + Y ++KG++ G V+ + ++ ++
Sbjct: 335 SHDQQSCVLEDIVKPWEQEEVPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRR 394
Query: 359 ---LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
P+ D +IS V G ++A ++L+EM G + Y +K YC+
Sbjct: 395 EGETSPAS-RPDHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQ 453
Query: 416 EHRTAEATQLV-MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+ + +A +L+ +D++ +G+Q DV Y+ LI+ + + D A +LF +MRE I
Sbjct: 454 QLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAV 513
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
SY T+M + +P+L DE+ +DPRV V WN ++ A+C+ G LE AK+ + R
Sbjct: 514 SYTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVER 573
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY 594
M +P+ TY SL G A + L++W EIK K DG+ +V+A
Sbjct: 574 MKARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEK-EVDGE--------VVEALAD 624
Query: 595 ALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAK 639
V+ F +++V + +EM V +K KYK+ +++ H ++ +K
Sbjct: 625 VCVRAALFRKALEMVARMEEMGVEPNKAKYKRMYVDLHSRMFTSK 669
>gi|77552783|gb|ABA95579.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 697
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 211/465 (45%), Gaps = 54/465 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ A NAAL C + + + M P+ ++ L + A G ++ +
Sbjct: 201 PDTAAFNAALSACANAGDCIR-FRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKDLVAR 259
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL--------LCL-----GGGNM- 323
+ + G + + SL++ YV G++ +A R + +CL ++
Sbjct: 260 VLHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIVQAMRERRTDICLLFRAVADDHII 319
Query: 324 ----------------EQSDF---------SKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
EQ + + Y ++KG++ G V+ + ++ ++
Sbjct: 320 SHDQQSCVLEDIVKPWEQEEVPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRR 379
Query: 359 ---LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
P+ D +IS V G ++A ++L+EM G + Y +K YC+
Sbjct: 380 EGETSPAS-RPDHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQ 438
Query: 416 EHRTAEATQLV-MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+ + +A +L+ +D++ +G+Q DV Y+ LI+ + + D A +LF +MRE I
Sbjct: 439 QLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAV 498
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
SY T+M + +P+L DE+ +DPRV V WN ++ A+C+ G LE AK+ + R
Sbjct: 499 SYTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVER 558
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY 594
M +P+ TY SL G A + L++W EIK K DG+ +V+A
Sbjct: 559 MKARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEK-EVDGE--------VVEALAD 609
Query: 595 ALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAK 639
V+ F +++V + +EM V +K KYK+ +++ H ++ +K
Sbjct: 610 VCVRAALFRKALEMVARMEEMGVEPNKAKYKRMYVDLHSRMFTSK 654
>gi|125535459|gb|EAY81947.1| hypothetical protein OsI_37125 [Oryza sativa Indica Group]
Length = 697
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 211/465 (45%), Gaps = 54/465 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ A NAAL C + + + M P+ ++ L + A G ++ +
Sbjct: 201 PDTAAFNAALSACADAGDCIR-FRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKDLVAR 259
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL--------LCL-----GGGNM- 323
+ + G + + SL++ YV G++ +A R + +CL ++
Sbjct: 260 VLHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIVQAMRERRTDICLLFRAVADDHII 319
Query: 324 ----------------EQSDF---------SKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
EQ + + Y ++KG++ G V+ + ++ ++
Sbjct: 320 SHDQQSCVLEDIVKPWEQDEVPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRR 379
Query: 359 ---LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
P+ D +IS V G ++A ++L+EM G + Y +K YC+
Sbjct: 380 EGETSPAS-RPDHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQ 438
Query: 416 EHRTAEATQLV-MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+ + +A +L+ +D++ +G+Q DV Y+ LI+ + + D A +LF +MRE I
Sbjct: 439 QLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAV 498
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
SY T+M + +P+L DE+ +DPRV V WN ++ A+C+ G LE AK+ + R
Sbjct: 499 SYTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVER 558
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY 594
M +P+ TY SL G A + L++W EIK K DG+ +V+A
Sbjct: 559 MKARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEK-EVDGE--------VVEALAD 609
Query: 595 ALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAK 639
V+ F +++V + +EM V +K KYK+ +++ H ++ +K
Sbjct: 610 VCVRAALFRKALEMVARMEEMGVEPNKAKYKRMYVDLHSRMFTSK 654
>gi|115483719|ref|NP_001065521.1| Os11g0103000 [Oryza sativa Japonica Group]
gi|77548314|gb|ABA91111.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644225|dbj|BAF27366.1| Os11g0103000 [Oryza sativa Japonica Group]
Length = 543
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 211/465 (45%), Gaps = 54/465 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ A NAAL C + + + M P+ ++ L + A G ++ +
Sbjct: 47 PDTAAFNAALSACADAGDCIR-FRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKDLVAR 105
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL--------LCL-----GGGNM- 323
+ + G + + SL++ YV G++ +A R + +CL ++
Sbjct: 106 VLHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIVQAMRERRTDICLLFRAVADDHII 165
Query: 324 ----------------EQSDF---------SKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
EQ + + Y ++KG++ G V+ + ++ ++
Sbjct: 166 SHDQQSCVLEDIVKPWEQDEVPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRR 225
Query: 359 ---LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
P+ D +IS V G ++A ++L+EM G + Y +K YC+
Sbjct: 226 EGETSPAS-RPDHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQ 284
Query: 416 EHRTAEATQLV-MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+ + +A +L+ +D++ +G+Q DV Y+ LI+ + + D A +LF +MRE I
Sbjct: 285 QLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAV 344
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
SY T+M + +P+L DE+ +DPRV V WN ++ A+C+ G LE AK+ + R
Sbjct: 345 SYTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVER 404
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY 594
M +P+ TY SL G A + L++W EIK K DG+ +V+A
Sbjct: 405 MKARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEK-EVDGE--------VVEALAD 455
Query: 595 ALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAK 639
V+ F +++V + +EM V +K KYK+ +++ H ++ +K
Sbjct: 456 VCVRAALFRKALEMVARMEEMGVEPNKAKYKRMYVDLHSRMFTSK 500
>gi|224138602|ref|XP_002322855.1| predicted protein [Populus trichocarpa]
gi|222867485|gb|EEF04616.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 146/628 (23%), Positives = 260/628 (41%), Gaps = 80/628 (12%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL--LD 141
T+EAW + T P + L++ LS +L+RA S++ + +L LD
Sbjct: 88 TEEAWVLY---TQTPHLPPPTCLSRLVSQLSYQNTPLSLRRA-QSILTRLRHECQLHRLD 143
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICR-KNSNFVAFLKV 200
++ L S + + AF+L+ M ++ Y + W L + + LK+
Sbjct: 144 ANSLGLLAVSATKSGQLSYAFSLINSMLRSGYLPHVKAWSAVLSRLASAPDGGPTRALKL 203
Query: 201 FEECCRIALDENLDFM----KPNIYACNAALEGCCYGLQSVSDAE---KVIETMSVLGVR 253
F R + M +P+ A N L C ++ D + K+ E M G+
Sbjct: 204 FNTITRRVRRFSDVTMVADSRPDTAAFNNVLNACA----NLGDGKMFLKLFEEMPDFGLE 259
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT 313
P+ ++ + L A ++ +V + + E G M SL++ YV G+LE+ R
Sbjct: 260 PDILTYNIMIKLCARCNRKDLLVFVLERVIEKGIPLCMTTLHSLVAAYVGFGDLETVERM 319
Query: 314 IL--------LC-------------------LGGGNMEQSDFSK---------------- 330
+ LC L + S F K
Sbjct: 320 VQAMREGRRDLCKILREANLEDFNEDEENEVLDSSQIGVSVFEKLLPNLVEVSNSEPPLL 379
Query: 331 --------ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ ++KG+++ G V ++ + + S D +ISA V G
Sbjct: 380 PKVFAPDSRIFTTLMKGYMKQGRVTDTVRMLEAMRCQDDSKGQPDHITYTTVISALVKAG 439
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS-GLQLDVGNY 441
D A +L EM G Y LK YC++ + +A +L+ +++ ++ DV +Y
Sbjct: 440 SMDPARQVLAEMTRIGVPANRITYNILLKGYCQQLQIDKAKELLKEMADDVNIEPDVVSY 499
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ LI+ I D A + F +MR I K SY T+M + +P+L DE+++
Sbjct: 500 NTLIDGCILVDDSAGALAFFNEMRTKGIMPTKISYTTLMKAFALSGQPKLANKVFDEMLK 559
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
DPRV+ WN ++ +C+ G +++AK ++RM F P+ TY SL NG A +
Sbjct: 560 DPRVKADLVAWNMLLEGYCRLGLVDEAKTVIQRMKENGFHPDVATYGSLANGISLARKPG 619
Query: 562 SVLMMWHEIKRKISTDGQK----------GIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
L++W E+K + G+ +K + L+ V+ FF +++V
Sbjct: 620 EALLLWKEVKERWEVKGEGESSNSDSPLLPLKPDEELLATLADICVRAAFFQKALEIVAC 679
Query: 612 SQEMKVFVDKWKYKQAFMENHKKLKVAK 639
+E + +K KYK+ ++E H ++ +K
Sbjct: 680 MEENGIPPNKTKYKKIYVEMHSRMFTSK 707
>gi|222616460|gb|EEE52592.1| hypothetical protein OsJ_34898 [Oryza sativa Japonica Group]
Length = 675
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 161/313 (51%), Gaps = 14/313 (4%)
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQK---LEPSGIVVDRSVGFGIISACVNLGLSDKA 387
Y ++KG++ G V+ + ++ ++ P+ D +IS V G ++A
Sbjct: 330 RVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPAS-RPDHVTYTTVISTLVAAGDMERA 388
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV-MDISSSGLQLDVGNYDALIE 446
++L+EM G + Y +K YC++ + +A +L+ +D++ +G+Q DV Y+ LI+
Sbjct: 389 RAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTLID 448
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ + D A +LF +MRE I SY T+M + +P+L DE+ +DPRV
Sbjct: 449 GCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPRVA 508
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
V WN ++ A+C+ G LE AK+ + RM +P+ TY SL G A + L++
Sbjct: 509 VDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLL 568
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ 626
W EIK K DG+ +V+A V+ F +++V + +EM V +K KYK+
Sbjct: 569 WEEIKEK-EVDGE--------VVEALADVCVRAALFRKALEMVARMEEMGVEPNKAKYKR 619
Query: 627 AFMENHKKLKVAK 639
+++ H ++ +K
Sbjct: 620 MYVDLHSRMFTSK 632
>gi|413919769|gb|AFW59701.1| hypothetical protein ZEAMMB73_115574 [Zea mays]
Length = 681
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 151/643 (23%), Positives = 280/643 (43%), Gaps = 95/643 (14%)
Query: 83 NTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDF 142
N +EA +S + P V NS+I LS + L+RAF V+ V + N LL+
Sbjct: 68 NVEEALQSLSNYKKLHGLPEPRVLNSIIVSLSYMSSRRWLQRAFDMVLSVYQINRNLLNC 127
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE 202
++ L ++ PA +++ + ++R ++ + + + V
Sbjct: 128 GSLMRLALALARDQMPIPASTVLRIILESRKLPDVDMLTMSFLHMLKSQVGSYLATDVLI 187
Query: 203 ECCRIALDE--------NLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
E C LD+ LD +K N N LE C + + A+K++E MS++GV
Sbjct: 188 ETCESFLDQVTDRREMKKLDPIKNNATLFNMVLESCV-TFKCIIKAQKIMELMSLIGVVA 246
Query: 255 NESSFGFLAYLYALKGLQEKIVEL----ESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
+ ++ + ++ + G +++++ + +SL + + FY SL+S + K ++++A
Sbjct: 247 DVNTVVMASRVFEMVGQRDELIHMKRSIDSLTSLTFLQYYLHFYDSLLSLHFKYNDMDAA 306
Query: 311 SR-----------TILLC----------LGGGNMEQSDFSKETYCEVVKGF--------- 340
++ +L C +G GN++ +V +GF
Sbjct: 307 AKFLIDLHQQPKPGVLFCNGLQKQSIIQIGSGNLKSGYKIMFDPKKVDRGFVLGTESQFG 366
Query: 341 ---LQNGNV----KGLANLIIEAQKLEPSGIVVD---RSVGFG--------IISACVNLG 382
L +GN+ K LA LII K I+ + S +G +++AC+ +G
Sbjct: 367 LVVLTDGNLLHTEKALAKLIIGCVKSRNMHILSNFFIMSCQYGLELISPQDVVTACIQMG 426
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
AH I+D + + G VG+ YV L+AY KE+++ E L+ I +D + D
Sbjct: 427 WLHAAHDIIDNLESAGIPVGITGYVSLLRAYEKENKSEEVNGLLQQIQKMASTMDDVHTD 486
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
S F++ ++ E Y++ S L+AA DE+
Sbjct: 487 -------------SPFTI-NNIAEVVKYEMSFS------------SSSLVAALADEIKHY 520
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
E + N+ + FCKA +EDA T + M P T+ ++ GY + + +
Sbjct: 521 NPGEHLALELNNSVLFFCKAKMMEDALCTYKCMREQNIRPTSHTFCHMLCGYSSMDMHRE 580
Query: 563 VLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKW 622
+ M+W EIKR+ G+ + + + +KGG+F VM+++ + ++ DKW
Sbjct: 581 ITMLWGEIKRR-HEYGELDLDRDLLDSLVLNF--LKGGYFSRVMEIISYMSKHNIYCDKW 637
Query: 623 KYKQAFMENHKKL-----KVAKLRKRNFKKMEALIAFKNWAGL 660
KY++AF++ HK L + + K++E + AF+ WA +
Sbjct: 638 KYRRAFLKLHKNLYRNLDSLHDKTEAQSKRIEDVRAFRLWASI 680
>gi|449461311|ref|XP_004148385.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g17616-like [Cucumis sativus]
gi|449530891|ref|XP_004172425.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g17616-like [Cucumis sativus]
Length = 714
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 151/656 (23%), Positives = 282/656 (42%), Gaps = 104/656 (15%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIE 134
L +L + DEAW+ F FP+ L++ LS D L +A+ V+ +
Sbjct: 92 LEIALKDHQIDEAWELFSDFRKLYGFPNDNFLLMLVSQLSYTSDCKRLHKAYNLVLQNWK 151
Query: 135 KNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNF 194
+ P +L T+ L+ + + PA +++ M + R EL ++ + +
Sbjct: 152 EKPVVLQLDTLTKLVLGLARSQMPIPASEILRLMLQTRRLPRMELLQLVILHMVKSEVGT 211
Query: 195 VAFLKVFEECCRIAL------DENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMS 248
+ + C L ++ MKP+ N L C S ++++E MS
Sbjct: 212 YLASNILVQICDCFLQQATSRNDQAKSMKPDTMLFNLVLHACVRFKLSFK-GQQLVELMS 270
Query: 249 VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV-----FYSSLISGYVK 303
V + + +A +Y + ++++ L++ +++ S +V FY +L+S + K
Sbjct: 271 QTEVVADAHTIVLIARIYEMNDQRDELKNLKTHIDQV--SPSLVCHYCQFYDALLSLHFK 328
Query: 304 LGNLESASRTIL-LC-LGGGNMEQS---DFSKETYCEVVKGFLQNG-------------- 344
+ +SA+ +L +C G N Q + K ++ + L++G
Sbjct: 329 YDDFDSAANLMLEICRFGESNSIQKHWRELQKSSFLPIGSRHLKDGLKIKIMPELLQRDS 388
Query: 345 --NV------------------KGLANLIIEAQKL----EPSGIVVDRSVGFG------- 373
NV K +A I+E +++ E S +++ G
Sbjct: 389 VLNVEVKPEFINYKNGKLVASNKTVAKFIVELRRVGETSELSKLLLQVQKGLASVEGSNL 448
Query: 374 ---IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
++ AC+ LG + AH ILD++ A G + VY LKAY K+ EA L ++
Sbjct: 449 CSDVVKACICLGWLETAHDILDDVEAVGSPLDSTVYFLLLKAYYKQDMLREADVLQKQMT 508
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
GL + T++D S+ +RI L + T L+E
Sbjct: 509 KVGLSIS------------TTEDMASS-----TCSSSRIL-LPNIEVATHTSLVE----- 545
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+ + E+ E + + +NS I+ FCKA +EDA + +RM L +P QT+ +L
Sbjct: 546 ---SLIQEMKETSSMS-RVLKFNSSIYFFCKAKMIEDALQAYKRMQQLGIQPTAQTFANL 601
Query: 551 INGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
+ G+ + Y ++ ++W +IKR++ + + +L + L ++GG+F+ VM++V
Sbjct: 602 VFGFSYLQMYRNITILWGDIKRRMQS---THLVLSRDLYECLLLCFIRGGYFERVMEIVG 658
Query: 611 KSQEMKVFVDKWKYKQAFMENHKKL------KVAKLRKRNFKKMEALIAFKNWAGL 660
+ +E ++ DK YK+ F+ HK L AK + K++E + AFK W G+
Sbjct: 659 RMEEQNMYTDKRMYKREFLMLHKNLYRSLKPSEAKTEAQK-KRLEDVRAFKKWVGI 713
>gi|24059903|dbj|BAC21367.1| pentatricopeptide repeat-containing protein -like protein [Oryza
sativa Japonica Group]
gi|50509198|dbj|BAD30402.1| pentatricopeptide repeat-containing protein -like protein [Oryza
sativa Japonica Group]
gi|125600311|gb|EAZ39887.1| hypothetical protein OsJ_24325 [Oryza sativa Japonica Group]
Length = 692
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 142/661 (21%), Positives = 286/661 (43%), Gaps = 105/661 (15%)
Query: 70 SLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASV 129
+L ++ +L N D+ ++F + P V + +I LS L+RAF V
Sbjct: 66 TLLRTINAALDDGNVDDVLQAFANYKTLHGLPEPRVLDRMIVSLSYASSRRWLQRAFDMV 125
Query: 130 VYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICR 189
+ V + N LL+ ++ L ++ PA +V+ + ++ ++ + + +
Sbjct: 126 LSVYQCNGNLLNCGSLMKLALALARDQMPIPASTVVRIILESGKLPDVDMLTMVYLHMVK 185
Query: 190 KNSNFVAFLKVFEECCRIALDE--------NLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
V E C L++ LD +K N+ N L+ C + + A+
Sbjct: 186 SQVGSYLAADVLCETCECFLEQIGDRRQLKKLDPIKSNVTLFNMVLKSCV-DFKCMIKAQ 244
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG----FSSQMVFYSSL 297
+++E MS++GV + ++ + ++ + G Q ++V ++ ++ F + FY SL
Sbjct: 245 RIMELMSLVGVVADVNTVAIASLVFEMVGQQVELVNMKRSIDSFASLPFIQHYLYFYGSL 304
Query: 298 ISGYVKLGNLESASRTIL---------------------LCLGGGNME------------ 324
++ + K ++++A++ ++ + +G GN++
Sbjct: 305 LNLHFKYNDMDAAAQLLVDLYRQQKPRAFVGDSVHKQGVIQIGSGNLKTGFRIMFDPIKV 364
Query: 325 --------QSDF------------SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
+S F S++ + + G L+ V+ L++ +I K + G
Sbjct: 365 DKGFVLDTESQFGLLAVIDGNIRPSEKALAKFIVGCLKASKVRALSSFLITLHKEDLKG- 423
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ISAC+ +G AH ILD++ + V + Y+ L+AY KE++ E +
Sbjct: 424 ----PSHSDVISACILMGWLHAAHDILDDLESAEIPVLICTYMSLLRAYEKENKPEEVNR 479
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
+ I + + T DF + S I D+ I+ M
Sbjct: 480 FLQQIQ---------------KKAYTMADFHTNPSF-------TIKDVA----KIVKDEM 513
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
L+++ + E+ E T ++N+ I FCKA ++DA T +RM P+
Sbjct: 514 PLRNSSLLSSLVQEIEHYSSREHLTFEFNNSILFFCKANMMDDALSTYKRMREQNVRPSL 573
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDA 604
T+ ++ GY + + + M+W EIKR++ G+ + + +L+D + + G+F
Sbjct: 574 HTFCHILCGYSSLGMHREIAMLWGEIKRRLEY-GE--LTVDRDLLDCLILNFLNAGYFAR 630
Query: 605 VMQVVEKSQEMKVFVDKWKYKQAFMENHKKLK-----VAKLRKRNFKKMEALIAFKNWAG 659
VM+V+ K++ DKWKYKQ F++ HK L + + ++ K++E + AF++WAG
Sbjct: 631 VMEVLSYMANRKMYCDKWKYKQVFLKLHKNLYRNLNLLHEKTEQQSKRIEDVRAFRSWAG 690
Query: 660 L 660
+
Sbjct: 691 V 691
>gi|242054089|ref|XP_002456190.1| hypothetical protein SORBIDRAFT_03g031900 [Sorghum bicolor]
gi|241928165|gb|EES01310.1| hypothetical protein SORBIDRAFT_03g031900 [Sorghum bicolor]
Length = 731
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 143/651 (21%), Positives = 263/651 (40%), Gaps = 81/651 (12%)
Query: 53 SPTQQQQQQTLTQDNITSLETNLHKSLLT----NNTDEAWKSFKSLTANSLFPSKPVTNS 108
SP + LT + +LL ++TD A+ F S+ S PS P T S
Sbjct: 51 SPATSRSTAPLTHAPDHDDDGASDDALLALLRAHDTDAAYSLFSSMP--SALPSSPTTAS 108
Query: 109 LIAHLSSLQDNHNLKRAFASVVYVIEK-----NPKLLDFQTVHTLLGSMRNANTAAPAFA 163
+ L+ L N N AF+ +++ LLD ++ + + + A +
Sbjct: 109 RL--LAQLSFNSNGPDAFSRAARLLQSLRARGALDLLDANSLSLAAAAAARSRDSRLAHS 166
Query: 164 LVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYAC 223
L+ M + + + + F V R + P+ A
Sbjct: 167 LLLYMLRQGLLPDRRAYTAAVARLTPPTKALRLFDAVLRHLRRSPPELVSPSCLPDAAAF 226
Query: 224 NAALEGC-----CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+AL C C + + DA MS + ++ + + A G ++ + +
Sbjct: 227 NSALSACADAGDCRRFRQLFDA------MSEWSAAADALTYNVVIKMCARAGRKDLVARV 280
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI------------------LLCLGG 320
M G + + SL++ +V G++ +A R + + C G
Sbjct: 281 LERMLSSGLAPCATTFHSLVAAFVGFGDIATAERIVQAMREERKDICLLLRAVAMDCDGA 340
Query: 321 GNM---------------EQSDFSKET-------------YCEVVKGFLQNGNVKGLANL 352
++ EQ + E Y ++KG++ G V +
Sbjct: 341 TDVVEEGAALLDDIVAGSEQELGADEVPLLPKAYPPNARVYTTLMKGYMNAGRVDDVVA- 399
Query: 353 IIEAQKLEPSGIVVDRS--VGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
++ A + E R V + ++SA V G +AH++LDEM A G Y
Sbjct: 400 VLRAMRQEARTAPASRPDHVTYTTVMSALVGAGDVARAHAVLDEMAADGVPANRVTYNVL 459
Query: 410 LKAYCKEHRTAEATQLVMD-ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
LK YC++ + +A +L + ++ +G+Q V Y+ L++ + S D A + F +MR
Sbjct: 460 LKGYCQQLQIGKARELFEEMVTDAGIQPGVVTYNTLMDGCVLSDDSAGALAFFNEMRSRG 519
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
I SY T+M + +P++ +E+ DPRV V WN ++ +C+ G++E A
Sbjct: 520 IAPSTVSYTTLMKAFAVSGQPKVAHKVFEEMERDPRVTVDRAAWNMLVEGYCRLGQVETA 579
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
K+ + RM +P+ TY SL G A + L++W+E+K + + + L
Sbjct: 580 KQVVERMKERGVQPDVATYGSLAKGVAMARKPGEALVLWNEVKERCLEEA------DEEL 633
Query: 589 VDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAK 639
+ A V+ FF +++V +E + +K KYK+ ++E H ++ +K
Sbjct: 634 LGALADVCVRAAFFKKALEIVACMEEKGIAPNKTKYKKMYIEMHSRMFTSK 684
>gi|255586271|ref|XP_002533788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526289|gb|EEF28601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 689
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 148/665 (22%), Positives = 266/665 (40%), Gaps = 121/665 (18%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIE 134
L SL + +EAW +F FP V L+A LS D L++A V + +
Sbjct: 68 LEVSLKDHRLNEAWVTFNDFKTLYGFPKGYVVCRLLAELSYSSDPRWLQKACNLVSQIFK 127
Query: 135 KNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKN--- 191
+ LL +T+ L S A PA +++ + + L + + +
Sbjct: 128 EKSDLLPTETLTKLSLSFARAQMPIPASMVLRVILERENTPAVSLLRLIVFHMVKTEVGT 187
Query: 192 ---SNFVAFLKVFEECCRIALDEN--LDFMKPNIYACNAALEGCCYGLQSVSDAEKVIET 246
SNF+ +++ E RI+ + N +K + N LEGC +S ++++E
Sbjct: 188 CLASNFL--IQICECLLRISANRNDHAKVIKLDTLIFNLVLEGCVR-FKSSLKGQELVEW 244
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG---FSSQMVFYSSLISGYVK 303
MS G+ + S +A +Y + GL+++I + + +++ Y L++ + +
Sbjct: 245 MSRTGIIADAHSVVIIAEIYEMNGLRDEIKKFKDHIDQVSAPFVCHYQQLYEVLLNLHFE 304
Query: 304 LGNLESASRTIL----------------------LCLGGGNMEQS--------DFSKETY 333
+L++AS +L + +G N+ KE+
Sbjct: 305 FDDLDAASELVLDMNRFRGLNPNKKPKNDQKPCLVSIGSQNLRAGLKIQILPEVLQKESV 364
Query: 334 CEV------------------------VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRS 369
V + G+ + G + L +++ QK + + S
Sbjct: 365 IRVEHGKGLLSSKNGKLLLSNRALANFIHGYKRQGRISELTKVLLSMQK--DFQTIGESS 422
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
+ +I AC LG + AH ILD+M G L Y+ L A +R+ E
Sbjct: 423 LCSDVIGACACLGWLETAHDILDDMETAGSPCSLTTYMVLLTA----YRSREM------- 471
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN--- 486
F+ A +L R +R+A + + T L+E
Sbjct: 472 ------------------------FKEADALVRQLRKAGLIKNLSVEMVAFTSLLERADN 507
Query: 487 -----HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
+ +L + E E+ V H+ NS I+ FCKA + DA + R+M +
Sbjct: 508 SSSSLSKSDLADFIIQETREEKEVTPTVHELNSSIYFFCKAKMMGDALKIYRKMQMKGIQ 567
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
P QT+ L+ GY + Y + ++W +IKR + + +L + L ++GG+
Sbjct: 568 PTVQTFAYLVYGYSSLGSYRDITILWGDIKRNMKN---RNFLVSRDLYELLLVNFLRGGY 624
Query: 602 FDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKK----LKVAKLRKR-NFKKMEALIAFKN 656
F+ VM+V +E K++ DKW YK F++ HK LK + R K++E + F+
Sbjct: 625 FERVMEVAGYMKECKMYTDKWMYKSEFLKLHKNLYKCLKASDTRNEVQRKRLEFVQTFRK 684
Query: 657 WAGLN 661
W G++
Sbjct: 685 WVGID 689
>gi|6730642|gb|AAF27063.1|AC008262_12 F4N2.23 [Arabidopsis thaliana]
Length = 857
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 80/89 (89%), Gaps = 1/89 (1%)
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST-DGQKGIKFEHNLVDAFL 593
M+FL++EPN+QTYLSLINGYV+ E+YF+VL++W+EIK KIS+ + +K + +H LVDAFL
Sbjct: 1 MVFLRYEPNNQTYLSLINGYVSGEKYFNVLLLWNEIKGKISSVEAEKRSRLDHALVDAFL 60
Query: 594 YALVKGGFFDAVMQVVEKSQEMKVFVDKW 622
YALVKGGFFDA MQVVEKSQEMK+FVDKW
Sbjct: 61 YALVKGGFFDAAMQVVEKSQEMKIFVDKW 89
>gi|357155605|ref|XP_003577175.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Brachypodium distachyon]
Length = 725
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 202/483 (41%), Gaps = 74/483 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDA------EKVIETMSVLGV--RPNESSFGFLAYLYALK 269
P+ A NAAL C +DA ++ + M G P+ ++ + A
Sbjct: 204 PDTAAFNAALSAC-------ADAGDCRRFRRLFDEMRAWGAAAEPDVVTYNVAIKMCARA 256
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------SRTILLCL--- 318
G ++ + + + G + + S+++ YV L ++ +A R LCL
Sbjct: 257 GRKDLVARVLPRILAAGLAPDATTFHSIVAAYVGLRDIPAAEAVVQAMRDRRADLCLLLR 316
Query: 319 --------------------------GGGNMEQSDF--------SKETYCEVVKGFLQNG 344
G E++ Y ++KG++ G
Sbjct: 317 QLPSSPSSSSDADEHSHVLEDIVVGDDGQGTEKAPLLLPRTYPPDSRVYTTLMKGYMNAG 376
Query: 345 NVKGLANLIIEAQKLEPSGIVV-----DRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
V +++ A+ + G + D ++S V G +AH++LD+M G
Sbjct: 377 RVD---DVVAMARAMRREGETMPASKPDHVTYTTVMSTLVAAGDVGRAHALLDDMAGAGV 433
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS---GLQLDVGNYDALIEASITSQDFQS 456
Y +K YC++ + ++A +L+ ++ S+ G++ DV Y+ L++ + + D
Sbjct: 434 PASRVTYNVLIKGYCQQLQMSKARELLQEMMSADGGGIEPDVVTYNTLMDGCVLADDSAG 493
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A +LF +MR + SY T+M +P + DE+ DP WN ++
Sbjct: 494 ALALFNEMRSRGVAPSTASYTTLMKAFAAAGQPRAVQRVFDEMDRDPNAAPDRAAWNMLV 553
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+C+ G LE AK +M +P+ T+ SL G A + L++W E+K +
Sbjct: 554 EGYCQQGHLESAKAATEKMKERGVQPDVATFGSLAKGVAAARKPGEALVLWGEVKARRDA 613
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLK 636
G+ ++ + L+DA V+G FF +++V +E + +K KYK+ ++E H ++
Sbjct: 614 -GE--LRPDEELLDALADVCVRGAFFKKALEIVACMEENGIAPNKTKYKKIYIEMHSRMF 670
Query: 637 VAK 639
+K
Sbjct: 671 TSK 673
>gi|414880874|tpg|DAA58005.1| TPA: hypothetical protein ZEAMMB73_979671 [Zea mays]
Length = 730
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 150/311 (48%), Gaps = 11/311 (3%)
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRS--VGFG-IISACVNLGLSDKAHS 389
Y ++KG+ G V + ++ A + E R V + +ISA V G +A +
Sbjct: 380 YTTLMKGYTNAGRVDDVLA-VLRAMRQEAQTAPASRPDHVTYTTVISALVGAGDMARARA 438
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD-ISSSGLQLDVGNYDALIEAS 448
+L+EM A Y LK YC++ + +A +L + ++ +G+Q V Y+ L++
Sbjct: 439 VLNEMAAARVPANRVTYNVLLKGYCQQLQIGQARELFEEMVTDAGIQPGVVTYNTLMDGC 498
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ + D A + F +MR I SY T+M + +P++ +E+ DPRV V
Sbjct: 499 VLTDDSAGALAFFNEMRSRGIAPSTVSYTTLMKAFAVSGQPKVAHKVFEEMERDPRVTVD 558
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
WN ++ +C+ G +E AK+ + RM +P+ TY S+ G A + L++W+
Sbjct: 559 RAAWNMLVEGYCRLGLVETAKQVVERMKERGVQPDVATYGSMAKGIAVARKPGEALVLWN 618
Query: 569 EIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAF 628
E+K + + + L+ A V+ FF +++V +E + +K KYK+ +
Sbjct: 619 EVKERCLKEA------DEELLGALADVCVRAAFFKKALEIVACMEEKGIAPNKTKYKKMY 672
Query: 629 MENHKKLKVAK 639
+E H ++ +K
Sbjct: 673 IEMHSRMFTSK 683
>gi|359496585|ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g17616-like, partial [Vitis vinifera]
Length = 457
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 156/343 (45%), Gaps = 68/343 (19%)
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQK----LEPSGIVVDRSVGFGIISACVNLGL 383
S + ++V + +G + L+ L++ QK LE G++ D +I AC+ LG
Sbjct: 174 LSNKALVKLVIAYQGDGRIGELSRLMLSLQKELGTLEGGGLISD------VIDACIQLGW 227
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
+ AH ILD+M G +G Y+ L AY K EA L+ + +G +D+ +
Sbjct: 228 LETAHGILDDMELAGAPIGSSTYMSLLTAYYKGKMAREAKALLKQMRKAGFVVDLSD--- 284
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
E +T T + G+ + P +
Sbjct: 285 --EMVMT---------------------------TCLLGVEKTILPVV------------ 303
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+++NS I+ FCKA +++DA R RRM + EP QT ++L+ GY Y +
Sbjct: 304 ------YEFNSSIYFFCKAKKIDDALRIYRRMQETEIEPTVQTSINLVYGYSCLNMYREI 357
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWK 623
++W IKR + + +L + + ++GG+F+ VM+V+ +E ++ DKW
Sbjct: 358 TILWGNIKRSRESG---SLVVCRDLYEFLVLNFLRGGYFERVMEVIGHMKEQNMYCDKWM 414
Query: 624 YKQAFMENHK----KLKVAKLR-KRNFKKMEALIAFKNWAGLN 661
YK F++ HK LK + R + K++E + AF+ WAG++
Sbjct: 415 YKSEFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRKWAGID 457
>gi|356565393|ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g17616-like [Glycine max]
Length = 684
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 165/360 (45%), Gaps = 42/360 (11%)
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
L+ SR L+ GG + S + + G+ + G + L+ L++ Q S V
Sbjct: 362 LKVESRQDLIFYKGGKLV---LSNSALAKFISGYKKYGRIGELSKLLLSIQGELNS--VA 416
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
S+ +I AC+ LG + AH ILD++ A G +G Y+ + AY K E L+
Sbjct: 417 GSSLCSDVIGACIQLGWLECAHDILDDVEATGSPMGRDTYMLLVSAYQKGGMQRETKALL 476
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ GL + + DA+ E ++ + S D+ A + LK
Sbjct: 477 KQMKKVGLDKGLSD-DAIDEHNLCEETLNSLGK--ADLAIALVQILKD------------ 521
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
ED V ++ NS I FCKAG +EDA R RRM+ ++ +P QT
Sbjct: 522 --------------EDQTVFPLVYNLNSSIFFFCKAGMIEDALRAYRRMVDMKIQPTSQT 567
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVM 606
+ L+ GY + Y + ++W +IKR + + G +L + L ++GG+F+ V+
Sbjct: 568 FAFLMCGYSSLGMYREITILWGDIKRFMRSGNLVG---NRDLYELLLLNFLRGGYFERVL 624
Query: 607 QVVEKSQEMKVFVDKWKYKQAFMENHKK----LKVAKLR-KRNFKKMEALIAFKNWAGLN 661
+V+ ++ ++ DKW YK F+ HK LK + R + K++E + F+ W G++
Sbjct: 625 EVISHMRDHNMYPDKWMYKNEFLRLHKNLYRSLKASNTRTEAQSKRLEHVQEFRKWVGID 684
>gi|147766554|emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]
Length = 444
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 169/343 (49%), Gaps = 39/343 (11%)
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQK----LEPSGIVVDRSVGFGIISACVNLGL 383
S + +++ + ++G + L+ L++ QK LE G++ D +I AC+ LG
Sbjct: 132 LSNKALAKLIIAYKRDGRIGELSRLMLSLQKELGTLE-GGLISD------VIDACIQLGW 184
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
+ AH ILD+M G Y+ L AY K EA L+ + +GL +D+ +
Sbjct: 185 LETAHDILDDMELAGAPASSITYMSLLTAYYKGKMVREAKALLKQMRKAGLIVDLSD--- 241
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
E +T+ L + + R++ + S +GL E+ E+ ++
Sbjct: 242 --EMVMTT-------CLSGVVDKNRMHT-RTSTSIWKSGLAESLVREMKK-------QEK 284
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+ + +NS I+ FCKA ++DA R RM ++ EP QT+++L+ GY Y +
Sbjct: 285 AILPVVYKFNSSIYFFCKAKMIDDALRIYGRMQEMKIEPTVQTFINLVYGYSCLNMYREI 344
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWK 623
++W +IK S+ + +L + + ++GG+F+ VM+V+ +E ++ DKW
Sbjct: 345 TILWGDIK---SSRKSGSLVVCRDLYEFLVLNFLRGGYFERVMEVIGCMKEQNMYCDKWM 401
Query: 624 YKQAFMENHK----KLKVAKLR-KRNFKKMEALIAFKNWAGLN 661
YK+ F++ HK LK + R + K++E + AF+ WAG++
Sbjct: 402 YKREFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRTWAGID 444
>gi|2245120|emb|CAB10542.1| hypothetical protein [Arabidopsis thaliana]
gi|7268514|emb|CAB78765.1| hypothetical protein [Arabidopsis thaliana]
Length = 1148
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 130/611 (21%), Positives = 250/611 (40%), Gaps = 106/611 (17%)
Query: 71 LETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVV 130
L+ L +L + D+AW FK FP + N + LS D L +A
Sbjct: 99 LKKKLETALKDHRVDDAWDVFKDFKRLYGFPESVIMNRFVTVLSYSSDAGWLCKASDLTR 158
Query: 131 YVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRK 190
+++NP +L + L S+ A A ++++ M + Y + D+ R
Sbjct: 159 LALKQNPGMLSGDVLTKLSLSLARAQMVESACSILRIMLEKGYVLT--------SDVLR- 209
Query: 191 NSNFVAFLKVFEECCRIALDENL--------DFMKPNIYACNAALEGCCYGLQSVSDAEK 242
L V C ++ N+ + +KP+ N L G C ++
Sbjct: 210 -------LVVMHMVCDRFVEFNVGKRNSSPGNVVKPDTVLFNLVL-GSCVRFGFSLKGQE 261
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGF-----SSQMVFYSSL 297
+IE M+ + V + S ++ +Y + G+++++ + + + +F F + ++
Sbjct: 262 LIELMAKVDVVADAYSIVIMSCIYEMNGMRDELRKFKEHIGQFKFDDIGSAGRLALDMCK 321
Query: 298 ISGYVKLGNLE-SASRTILLCLGGGNME------------QSD----------------- 327
V + NL + + +L +G ++ Q D
Sbjct: 322 SKVLVSVENLGFDSEKPRVLPVGSHHIRSGLKIHISPKLLQRDSSLGVDTEATFVNYSNS 381
Query: 328 ---FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
+ +T ++V G+ ++ N+ L+ L+ L S + D +I ACV +G
Sbjct: 382 KLGITNKTLAKLVYGYKRHDNLPELSKLLFS---LGGSRLCAD------VIDACVAIGWL 432
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
+ AH ILD+MN+ G + L Y L Y K A L+ ++ +GL D N
Sbjct: 433 EAAHDILDDMNSAGYPMELATYRMVLSGYYKSKMLRNAEVLLKQMTKAGLITDPSNE--- 489
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I S +++ S + RD+ I N ++ A +
Sbjct: 490 IVVSPETEEKDSENTELRDLLVQEI----------------NAGKQMKAPSM-------- 525
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
++ NS ++ FCKA DA T R++ ++ P Q++ LI+ Y + Y +
Sbjct: 526 ----LYELNSSLYYFCKAKMQGDALITYRKIPKMKIPPTVQSFWILIDMYSSLGMYREIT 581
Query: 565 MMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
++W +IKR I++ K +K +L++ + ++GG+F+ VM+++ +E ++ D Y
Sbjct: 582 IVWGDIKRNIAS---KNLKTTQDLLEKLVVNFLRGGYFERVMELISYMKENDMYNDLTMY 638
Query: 625 KQAFMENHKKL 635
K +++ HK L
Sbjct: 639 KNEYLKLHKNL 649
>gi|125558409|gb|EAZ03945.1| hypothetical protein OsI_26081 [Oryza sativa Indica Group]
Length = 718
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 124/615 (20%), Positives = 256/615 (41%), Gaps = 100/615 (16%)
Query: 70 SLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASV 129
+L ++ +L N D+ ++F + P V + +I LS L+RAF V
Sbjct: 130 TLLRTINAALDDGNVDDVLQAFANYKTLHGLPEPRVLDRMIVSLSYASSRRWLQRAFDMV 189
Query: 130 VYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICR 189
+ V + N LL+ ++ L ++ PA +V+ + ++ ++ + + +
Sbjct: 190 LSVYQCNGNLLNCGSLMKLALALARDQMPIPASTVVRIILESGKLPDVDMLTMVYLHMVK 249
Query: 190 KNSNFVAFLKVFEECCRIALDE--------NLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
V E C L++ LD +K N+ N L+ C + + A+
Sbjct: 250 SQVGSYLAADVLCETCECFLEQIGDRRQLKKLDPIKSNVTLFNMVLKSCV-DFKCMIKAQ 308
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG----FSSQMVFYSSL 297
+++E MS++GV + ++ + ++ + G + ++V ++ ++ F + FY SL
Sbjct: 309 RIMELMSLVGVVADVNTVAIASLVFEMVGQRVELVNMKRSIDSFASLPFIQHYLYFYGSL 368
Query: 298 ISGYVKLGNLESASRTIL---------------------LCLGGGNME------------ 324
++ + K ++++A++ ++ + +G GN++
Sbjct: 369 LNLHFKYNDMDAAAQLLVDLYRQQKPRAFVGDSVHKQGVIQIGSGNLKTGFRIMFDPIKV 428
Query: 325 --------QSDF------------SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
+S F S++ + + G L+ V+ L++ +I K + G
Sbjct: 429 DKGFVLDTESQFGLLAVIDGNIRPSEKALAKFIVGCLKASKVRALSSFLITLHKEDLKG- 487
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ISAC+ +G AH ILD++ + V + Y+ L+AY KE++ E +
Sbjct: 488 ----PSHSDVISACILMGWLHAAHDILDDLESAEIPVLICTYMSLLRAYEKENKPEEVNR 543
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
+ I + + T DF + S I D+ I+ M
Sbjct: 544 FLQQIQ---------------KKAYTMADFHTNPSF-------TIKDVA----KIVKDEM 577
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
L+++ + E+ E T ++N+ I FCKA ++DA T +RM P+
Sbjct: 578 PLRNSSLLSSLVQEIEHYSSREHLTFEFNNSILFFCKANMMDDALSTYKRMREQNVRPSL 637
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDA 604
T+ ++ GY + + + M+W EIKR++ G+ + + +L+D + + G+F
Sbjct: 638 HTFCHILCGYSSLGMHREIAMLWGEIKRRLEY-GE--LTVDRDLLDCLILNFLNAGYFAR 694
Query: 605 VMQVVEKSQEMKVFV 619
VM+V+ +K V
Sbjct: 695 VMEVLSYMATVKCTV 709
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 171/376 (45%), Gaps = 20/376 (5%)
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGL----QSVSDAEKVIETMSVLGVRPNES 257
EE C I D +K + + GC L VS A +V + M V G++ N
Sbjct: 424 EEKCLIVFDR----LKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMK 479
Query: 258 SFGFLAYLYA-LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
++ L + LK E ++ + G +V Y+++I + +GN++ A RT+
Sbjct: 480 TYSMLINGFVRLKDWANAFAVFEDVVKD-GLKPDVVLYNNIIRAFCGMGNMDRAIRTVKE 538
Query: 317 CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
E+ + T+ ++ GF ++G+++ + + SG + +I
Sbjct: 539 M----QKERHRPTTRTFMPIIHGFARSGDMRRALEIF---DMMRWSGCIPTVHTFNALIL 591
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
V +KA ILDEM+ G S Y + Y T +A + + + GL+L
Sbjct: 592 GLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLEL 651
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM-AAF 495
DV Y+AL++A S QSA ++ R+M +I Y ++ G R ++ AA
Sbjct: 652 DVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWAR--RGDVWEAAE 709
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
L + ++ V+ H + S I+A CKAG ++ A +T++ M + +PN +TY +LI+G+
Sbjct: 710 LMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWA 769
Query: 556 TAEQYFSVLMMWHEIK 571
A L + E+K
Sbjct: 770 RASLPEKALKCFQEMK 785
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 130/316 (41%), Gaps = 43/316 (13%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A E+M G+ P + L + YA+ E+ + M E G +V YS L+
Sbjct: 287 ARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVG 346
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
G+ K+ + E+A + + Y ++ Q N+ L+ E +
Sbjct: 347 GFAKIADAEAADH----WFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVRE---M 399
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
E GI + ++ +G +K + D + CG + + Y + Y K +
Sbjct: 400 EEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKV 459
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
++A ++ + +G++ ++ Y LI + +D+ +AF++F D+ +
Sbjct: 460 SKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV--------------V 505
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
GL +P+++ +N+II AFC G ++ A RT++ M +
Sbjct: 506 KDGL----KPDVVL------------------YNNIIRAFCGMGNMDRAIRTVKEMQKER 543
Query: 540 FEPNDQTYLSLINGYV 555
P +T++ +I+G+
Sbjct: 544 HRPTTRTFMPIIHGFA 559
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 163/385 (42%), Gaps = 24/385 (6%)
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+++ AE ++ M G+ + + Y + G +EK + + + E GF+ ++ Y
Sbjct: 388 NMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYG 447
Query: 296 SLISGYVKLGNLESA---SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL 352
LI+ Y+K+G + A S+ + + NM+ TY ++ GF++ +K AN
Sbjct: 448 CLINLYIKIGKVSKALEVSKMMEVAGIKHNMK-------TYSMLINGFVR---LKDWANA 497
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ + G+ D + II A +G D+A + EM ++P +
Sbjct: 498 FAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHG 557
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
+ + A ++ + SG V ++ALI + + A + +M A I
Sbjct: 558 FARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPN 617
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+ +Y TIM G + ++ + +E+ + + +++ A CK+GR++ A
Sbjct: 618 EHTYTTIMHGYASLGDTGKAFEYFTKLKTE-GLELDVYTYEALLKACCKSGRMQSALAVT 676
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAF 592
R M + N Y LI+G+ + + ++K Q+G++ + + +F
Sbjct: 677 REMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK-------QEGVQPDIHTYTSF 729
Query: 593 LYALVKGGFFDAVMQVVEKSQEMKV 617
+ A K G + + QEM+V
Sbjct: 730 INACCKAGDMQRATKTI---QEMEV 751
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+I+ + + CC + A K I+ M V+GV+PN ++ L + +A L EK
Sbjct: 719 VQPDIHTYTSFINACCKA-GDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKA 777
Query: 276 VELESLMNEFGFSSQMVFYSSLIS 299
++ M G Y L++
Sbjct: 778 LKCFQEMKSAGLKPDKAVYHCLMT 801
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 171/376 (45%), Gaps = 20/376 (5%)
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGL----QSVSDAEKVIETMSVLGVRPNES 257
EE C I D +K + + GC L VS A +V + M V G++ N
Sbjct: 445 EEKCLIVFDR----LKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMK 500
Query: 258 SFGFLAYLYA-LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
++ L + LK E ++ + G +V Y+++I + +GN++ A RT+
Sbjct: 501 TYSMLINGFVRLKDWANAFAVFEDVVKD-GLKPDVVLYNNIIRAFCGMGNMDRAIRTVKE 559
Query: 317 CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
E+ + T+ ++ GF ++G+++ + + SG + +I
Sbjct: 560 M----QKERHRPTTRTFMPIIHGFARSGDMRRALEIF---DMMRWSGCIPTVHTFNALIL 612
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
V +KA ILDEM+ G S Y + Y T +A + + + GL+L
Sbjct: 613 GLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLEL 672
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM-AAF 495
DV Y+AL++A S QSA ++ R+M +I Y ++ G R ++ AA
Sbjct: 673 DVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWA--RRGDVWEAAE 730
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
L + ++ V+ H + S I+A CKAG ++ A +T++ M + +PN +TY +LI+G+
Sbjct: 731 LMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWA 790
Query: 556 TAEQYFSVLMMWHEIK 571
A L + E+K
Sbjct: 791 RASLPEKALKCFQEMK 806
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 130/316 (41%), Gaps = 43/316 (13%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A E+M G+ P + L + YA+ E+ + M E G +V YS L+
Sbjct: 308 ARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVG 367
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
G+ K+ + E+A + + Y ++ Q N+ L+ E +
Sbjct: 368 GFAKIADAEAADH----WFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVRE---M 420
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
E GI + ++ +G +K + D + CG + + Y + Y K +
Sbjct: 421 EEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKV 480
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
++A ++ + +G++ ++ Y LI + +D+ +AF++F D+ +
Sbjct: 481 SKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV--------------V 526
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
GL +P+++ +N+II AFC G ++ A RT++ M +
Sbjct: 527 KDGL----KPDVVL------------------YNNIIRAFCGMGNMDRAIRTVKEMQKER 564
Query: 540 FEPNDQTYLSLINGYV 555
P +T++ +I+G+
Sbjct: 565 HRPTTRTFMPIIHGFA 580
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 163/385 (42%), Gaps = 24/385 (6%)
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+++ AE ++ M G+ + + Y + G +EK + + + E GF+ ++ Y
Sbjct: 409 NMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYG 468
Query: 296 SLISGYVKLGNLESA---SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL 352
LI+ Y+K+G + A S+ + + NM+ TY ++ GF++ +K AN
Sbjct: 469 CLINLYIKIGKVSKALEVSKMMEVAGIKHNMK-------TYSMLINGFVR---LKDWANA 518
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ + G+ D + II A +G D+A + EM ++P +
Sbjct: 519 FAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHG 578
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
+ + A ++ + SG V ++ALI + + A + +M A I
Sbjct: 579 FARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPN 638
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+ +Y TIM G + ++ + +E+ + + +++ A CK+GR++ A
Sbjct: 639 EHTYTTIMHGYASLGDTGKAFEYFTKLKTE-GLELDVYTYEALLKACCKSGRMQSALAVT 697
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAF 592
R M + N Y LI+G+ + + ++K Q+G++ + + +F
Sbjct: 698 REMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK-------QEGVQPDIHTYTSF 750
Query: 593 LYALVKGGFFDAVMQVVEKSQEMKV 617
+ A K G + + QEM+V
Sbjct: 751 INACCKAGDMQRATKTI---QEMEV 772
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+I+ + + CC + A K I+ M V+GV+PN ++ L + +A L EK
Sbjct: 740 VQPDIHTYTSFINACCKA-GDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKA 798
Query: 276 VELESLMNEFGFSSQMVFYSSLIS 299
++ M G Y L++
Sbjct: 799 LKCFQEMKSAGLKPDKAVYHCLMT 822
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 155/348 (44%), Gaps = 31/348 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ + + + G C + + K+IE M + G++PN ++ + L G K+ E
Sbjct: 286 PDVISYSTVINGYC-QVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTG---KVAE 341
Query: 278 LESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--T 332
E ++ E G + V Y++LI G+ KLGN+ SA R M++ S + T
Sbjct: 342 AERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF------DEMQKRKISPDFIT 395
Query: 333 YCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
Y V+ G Q G V L E ++LEP D +I G +A S+
Sbjct: 396 YTAVICGLCQTGRVMEADKLFHEMVCKRLEP-----DEVTYTALIDGYCKEGKMKEAFSL 450
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
++M G + + Y CK A +L+ ++ GL+L++ Y++L+
Sbjct: 451 HNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCK 510
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR----PELMAAFLDEVVEDPRVE 506
+ + A L +DM A + +Y T+M ++ EL+ LD ++ V
Sbjct: 511 AGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT 570
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N +++ FC +G LED ++ L+ M+ PN TY SLI Y
Sbjct: 571 -----FNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 613
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 150/358 (41%), Gaps = 22/358 (6%)
Query: 222 ACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESL 281
+CN + L + A KV +GV N +S+ + + G ++VE L
Sbjct: 219 SCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLG---RVVEAHQL 275
Query: 282 MNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEV 336
+ + G ++ YS++I+GY ++G L+ + I M+ TY V
Sbjct: 276 LLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI------EEMQIKGLKPNPYTYNGV 329
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ + G V ++ E + GI D + +I LG A+ + DEM
Sbjct: 330 ILLLCKTGKVAEAERVLRE---MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 386
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
S Y + C+ R EA +L ++ L+ D Y ALI+ +
Sbjct: 387 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKE 446
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
AFSL M + + +Y + GL + + L E+ +E+ + +NS++
Sbjct: 447 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG-LELNIYTYNSLV 505
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+ CKAG ++ A + ++ M F P+ TY +L++ Y + + ++ HE+ R++
Sbjct: 506 NGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE----MVRAHELLRQM 559
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 120/269 (44%), Gaps = 15/269 (5%)
Query: 353 IIEAQKL----EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
++EA +L E G + D +I+ +G + +++EM G Y
Sbjct: 269 VVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNG 328
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ CK + AEA +++ ++ S G+ D Y LI+ + SA+ LF +M++ +
Sbjct: 329 VILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK 388
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
I +Y ++ GL + R E+V R+E + ++I +CK G++++A
Sbjct: 389 ISPDFITYTAVICGLCQTGRVMEADKLFHEMV-CKRLEPDEVTYTALIDGYCKEGKMKEA 447
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
+M+ + PN TY +L +G + + + HE+ R KG++
Sbjct: 448 FSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR-------KGLELNIYT 500
Query: 589 VDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
++ + L K G D Q V+ ++M+V
Sbjct: 501 YNSLVNGLCKAGNID---QAVKLMKDMEV 526
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 129/354 (36%), Gaps = 74/354 (20%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ A + G C V +A+K+ M + P+E ++ L Y +G ++
Sbjct: 389 ISPDFITYTAVICGLCQT-GRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEA 447
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSKETYC 334
L + M + G + +V Y++L G K G +++A+ + +C G + + TY
Sbjct: 448 FSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG-----LELNIYTYN 502
Query: 335 EVVKGFLQNGNVKGLANLI--IEAQKLEPSGI------------------------VVDR 368
+V G + GN+ L+ +E P + ++DR
Sbjct: 503 SLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR 562
Query: 369 S-----VGFGII--SACVNLGLSD------------------------KAHSILDEMNAC 397
V F ++ C++ L D K + I + M A
Sbjct: 563 ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRAT 622
Query: 398 G------CSVGL----GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
C+ G+ Y +K +CK EA L D+ G L V +Y+ALI+
Sbjct: 623 TEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKG 682
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ F A LF MR + + Y + + EL DE +E
Sbjct: 683 FYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 736
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 145/324 (44%), Gaps = 30/324 (9%)
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLI 298
K+IE M + G++PN ++ + L G K+ E E ++ E G + V Y++LI
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTG---KVAEAERVLREMISEGIAPDGVIYTTLI 265
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIE- 355
G+ KLGN+ SA R M++ S + TY V+ G Q G V L E
Sbjct: 266 DGFCKLGNVSSAYRLF------DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 319
Query: 356 -AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
++LEP D +I G +A S+ ++M G + + Y C
Sbjct: 320 VCKRLEP-----DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC 374
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
K A +L+ ++ GL+L++ Y++L+ + + A L +DM A +
Sbjct: 375 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAV 434
Query: 475 SYLTIMTGLMENHR----PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+Y T+M ++ EL+ LD ++ V +N +++ FC +G LED ++
Sbjct: 435 TYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT-----FNVLMNGFCMSGMLEDGEK 489
Query: 531 TLRRMIFLQFEPNDQTYLSLINGY 554
L+ M+ PN TY SLI Y
Sbjct: 490 LLKWMLEKGIMPNATTYNSLIKQY 513
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 8/243 (3%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
TY V+ + G V ++ E + GI D + +I LG A+ +
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLRE---MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
DEM S Y + C+ R EA +L ++ L+ D Y ALI+
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ AFSL M + + +Y + GL + + L E+ +E+ +
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG-LELNIYT 400
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+NS+++ CKAG ++ A + ++ M F P+ TY +L++ Y + + ++ HE+
Sbjct: 401 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE----MVRAHELL 456
Query: 572 RKI 574
R++
Sbjct: 457 RQM 459
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 141/364 (38%), Gaps = 56/364 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ A + G C V +A+K+ M + P+E ++ L Y +G ++
Sbjct: 289 ISPDFITYTAVICGLCQT-GRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEA 347
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSKETYC 334
L + M + G + +V Y++L G K G +++A+ + +C G + + TY
Sbjct: 348 FSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG-----LELNIYTYN 402
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+V G + GN+ D+A ++ +M
Sbjct: 403 SLVNGLCKAGNI--------------------------------------DQAVKLMKDM 424
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G Y + AYCK A +L+ + LQ V ++ L+ S
Sbjct: 425 EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGML 484
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTG--LMENHRP--ELMAAFLDE-VVEDPRVEVKT 509
+ L + M E I +Y +++ + N R E+ + VV D
Sbjct: 485 EDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPD------G 538
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+ +N +I CKA +++A R M+ F +Y +LI G+ +++ ++ +
Sbjct: 539 NTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQ 598
Query: 570 IKRK 573
++R+
Sbjct: 599 MRRE 602
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+ +N +I CK G++ +A+R LR MI P+ Y +LI+G+ S ++ E
Sbjct: 224 YTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDE 283
Query: 570 I-KRKISTD 577
+ KRKIS D
Sbjct: 284 MQKRKISPD 292
>gi|297804420|ref|XP_002870094.1| hypothetical protein ARALYDRAFT_354992 [Arabidopsis lyrata subsp.
lyrata]
gi|297315930|gb|EFH46353.1| hypothetical protein ARALYDRAFT_354992 [Arabidopsis lyrata subsp.
lyrata]
Length = 1299
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 127/629 (20%), Positives = 270/629 (42%), Gaps = 51/629 (8%)
Query: 71 LETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVV 130
L+ L +L + D+AW FK FP + N + LS D+ L +A
Sbjct: 93 LKKKLETALKDHRVDDAWDVFKDFKRLYGFPESVIMNRFVTVLSYSSDSGWLCKASDLTR 152
Query: 131 YVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRK 190
+++NP +L + L S+ A A ++++ M + + + ++ ++ + +
Sbjct: 153 LALKQNPGMLSGDVLTKLSLSLARAQMVESACSILRIMLEKDFVLTSDVLRLVVMHLVKT 212
Query: 191 NSNFVAFLKVFEECCRIALDENL--------DFMKPNIYACNAALEGCCYGLQSVSDAEK 242
+ C ++ N+ + +KP+ N L G C ++
Sbjct: 213 EVGTCLASNYLVQVCDRFVELNVGKRNSSAGNVVKPDTALFNLVL-GSCVRFGFSLKGQE 271
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV-----FYSSL 297
+IE M+ + V + S ++ +Y + G+++++ + + + + Q++ + +L
Sbjct: 272 LIELMAKVDVVADAYSIVIMSCIYEMNGMRDELRKFKEHIGQ--VPPQLLCHYRHLFDNL 329
Query: 298 ISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
+S K ++ SA R +L +C + + ++ V L G+ + L I
Sbjct: 330 LSLEFKFDDIRSAGRLVLDMCKSKDLVSVQNLGFDSEKPRV---LPVGSHHIRSGLKIH- 385
Query: 357 QKLEPSGIVVDRSVGFGIISACVN-----LGLSDKA----------HSILDEMNACGCSV 401
+ P + D S+G + VN LG+++K H IL E++ S+
Sbjct: 386 --ISPKLLQRDSSLGVDTEATFVNFSNSKLGITNKTLAKLVYGHKRHDILPELSKLLFSL 443
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDI-SSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
G + C EA ++D+ S+G +++ Y ++ S ++A L
Sbjct: 444 GGSRLCADVIDACVTIDWLEAAHDILDVMVSAGHPMELATYRKVLSGYYKSNMLRNAEVL 503
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHR--PELMAAFLDEVVEDPRVEVKT--HDWNSII 516
+ M +A + + + + E R EL + E+ + +V + ++ NS +
Sbjct: 504 LKQMTKAGLITDPSNEIVVSPETEEKDRENTELRDLLVQEINAGKQEKVPSMLYELNSSL 563
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+ FCKA DA T R++ ++ P Q++ LI+ Y + Y + ++W +IKR I++
Sbjct: 564 YYFCKARMQGDAIITYRKIPKMKIPPTVQSFWILIDMYSSLGMYREITIVWGDIKRNIAS 623
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKL- 635
K +K +L++ + ++GG+F+ VM+V+ +E + D YK +++ HK L
Sbjct: 624 ---KNLKVTQDLLEKLVVNFLRGGYFERVMEVISYMKENDMINDLTMYKNEYLKLHKNLY 680
Query: 636 ----KVAKLRKRNFKKMEALIAFKNWAGL 660
+ + +++E + AF+ G+
Sbjct: 681 RTLKASDAVTEAQAQRLEHVKAFRKLVGI 709
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 131/587 (22%), Positives = 233/587 (39%), Gaps = 94/587 (16%)
Query: 28 PSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEA 87
P FL+P F+ +R+ L P + + T T+L + LL + A
Sbjct: 2 PHGCHFLRPLSFTCRRRRLHSSLPRADGDGTEAGAATD---TTLLGRFTRLLLLHRFPAA 58
Query: 88 WKSFKSLTANSLFPSKPVTNSLIA--------------HLSSLQDNHNLKRAFASVVYVI 133
+ S S P+T +L+ HL L + + A +++++
Sbjct: 59 ERLLAS--------SSPLTPALLQAALRRVRLDPDAALHLFRLAPSRPSLVSHAQLLHIL 110
Query: 134 EKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYF--MPFELWGGFLVDICRKN 191
+ + F LL S+ A P F + ++++ F + F+L L+
Sbjct: 111 ARARR---FHDARALLSSL--PPHAEPLFPHLAEVYRDFTFSAVSFDL----LLRAHADA 161
Query: 192 SNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD--AEKVIETMSV 249
+ L VF+ ++ +P++ +CN L +QS A V M +
Sbjct: 162 GQLSSALNVFDGMGKVGC-------RPSLRSCNRLLNKL---VQSGDPGMAAMVYGQMRI 211
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
GV P+E + +A Y G + VE M G +V Y +++ Y +G E
Sbjct: 212 AGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTED 271
Query: 310 ASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A R + ++++ S TY +VKG+ ++G ++ ++ E + E IVVD
Sbjct: 272 ARRIL------ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMK--ETGDIVVD 323
Query: 368 RSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
V +G+ I+ G D A + +EM G V L VY + CK R E +++
Sbjct: 324 -EVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVL 382
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
++ G++ D +Y+ LI+ + AF + R M + +Y T++ G
Sbjct: 383 QEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSL 442
Query: 487 HRPE-------LM------------AAFLDEVVEDPRVEVKTHDW--------------- 512
H + LM + LD + + + E + W
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITF 502
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
N++I+ CK GR+ +A+ L RM L+ P+ TY +L +GY Q
Sbjct: 503 NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQ 549
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 5/233 (2%)
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ K + ++G V A + +++E G+ V+ ++ +G ++ A IL+ +
Sbjct: 224 MAKAYCRDGRV---AQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQ 280
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG-LQLDVGNYDALIEASITSQDF 454
G S + Y +K YCK+ R EA ++V ++ +G + +D Y +I
Sbjct: 281 RKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRM 340
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A + +MR+A I+ Y T++ GL + R E + L E+ ED + + +N+
Sbjct: 341 DDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM-EDVGMRPDKYSYNT 399
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+I +C+ G + A R M+ TY +L+ G+ + L +W
Sbjct: 400 LIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLW 452
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 165/410 (40%), Gaps = 57/410 (13%)
Query: 193 NFVAFLKVFEECCRIA----LDENLDFMK-----PNIYACNAALEGCCYGLQSVSDAEKV 243
N + F V C+I +E LD MK P+ +G C L + A +
Sbjct: 498 NVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCK-LGQLGTATHL 556
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+ M LG P+ F + + K+ ++ S M+ G S +V Y +LI+G+ K
Sbjct: 557 MNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCK 616
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV---KGLANLIIEAQKLE 360
GNL A Y E+V + N NV L + + K++
Sbjct: 617 EGNLHEAC-------------------NLYFEMVNNGM-NPNVFICSALMSCFYKEGKVD 656
Query: 361 PSGIVVDRSVGFGIISAC-VNLGLSDKAHSILDEM---NACGCSVGLGVYVPTLKAYCKE 416
+ +V+ + V +I C ++ DK ++D + N +V V + L CK
Sbjct: 657 EANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGL---CKS 713
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R A+A L + + D Y +LI S AFSL M A + +Y
Sbjct: 714 GRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITY 773
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR------------ 524
+++ GL ++ + +++ + + +N++I +CK G+
Sbjct: 774 NSLIYGLCKSGKLSRAVNLFNKL-QSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMV 832
Query: 525 ----LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+E+A + L +MI +PN TY +LI+GY+ + + ++ E+
Sbjct: 833 EEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEM 882
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 191/499 (38%), Gaps = 91/499 (18%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N++ N + G C L + + +KV++ M +G+RP++ S+ L Y +G K E+
Sbjct: 358 NLFVYNTMINGLCK-LGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEM 416
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
+M G ++ + Y++L+ G+ L ++ A R L L G + ++ S T ++
Sbjct: 417 CRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRG-VAPNEISCST---LLD 472
Query: 339 GFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
G + G + NL E A+ L + I + +I+ +G +A +LD M
Sbjct: 473 GLFKAGKTEQALNLWKETLARGLAKNVITFNT-----VINGLCKIGRMAEAEELLDRMKE 527
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQL------------------------------- 425
C Y YCK + AT L
Sbjct: 528 LRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHK 587
Query: 426 VMDI----SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM----------------- 464
V DI S+ GL ++ Y ALI + A +L+ +M
Sbjct: 588 VNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMS 647
Query: 465 ---REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV--VEDPRVEVKTHD----WNSI 515
+E ++ D L + + + +D++ V D + H WN I
Sbjct: 648 CFYKEGKV-DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVI 706
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA---EQYFSV--LMMWHEI 570
I CK+GR+ DAK + +F P++ TY SLI+G + ++ FS+ +M+ +
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766
Query: 571 KRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFME 630
I T ++ +Y L K G + + K Q + + Y E
Sbjct: 767 TPNIIT------------YNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDE 814
Query: 631 NHKKLKVAKLRKRNFKKME 649
K+ K + K K +E
Sbjct: 815 YCKEGKTTEAFKLKQKMVE 833
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 179 LWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVS 238
+W + +C+ S +A K E R N F+ P+ + ++ + GC S+
Sbjct: 702 MWNVIIFGLCK--SGRIADAKSLFESLR-----NKRFL-PDNFTYSSLIHGCAAS-GSID 752
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+A + + M G+ PN ++ L Y G + V L + + G S + Y++LI
Sbjct: 753 EAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLI 812
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQS------------DFSKETYCEVVKGFLQNGNV 346
Y K G A + + G ME++ D + TYC ++ G++++GN+
Sbjct: 813 DEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNM 872
Query: 347 KGLANLIIE 355
+ ++ L E
Sbjct: 873 EEISKLYDE 881
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 179/407 (43%), Gaps = 16/407 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN N + GCC L + +A VIE MS V P+ ++ + + +G + +
Sbjct: 265 PNRTTFNILVVGCCR-LGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMR 323
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M S +V Y++LI+G + G+ E + I G G S TY +V
Sbjct: 324 LREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNS----VTYNVMV 379
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
K F++ G + + + +K+E SG + D +IS +G D+A ++DEM
Sbjct: 380 KWFVKKGKMDEVDKTV---RKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRK 436
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + L+A C+E + EA L+ G +D +Y LI + A
Sbjct: 437 GLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQA 496
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
L+ +M+E I +Y +++ GL + + LDE++E V + +N+IIH
Sbjct: 497 LRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEI-TYNTIIH 555
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTD 577
+C+ G++E A + +M+ F+P+ T +L+ G L ++ +T
Sbjct: 556 GYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLF-------NTW 608
Query: 578 GQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KG + + + +L K F ++E+ +E K+ D + Y
Sbjct: 609 ISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTY 655
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 149/348 (42%), Gaps = 12/348 (3%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
ENL + P++ N + GC + S + K+IE M G++PN ++ + + KG
Sbjct: 329 ENLK-LSPDVVTYNTLINGC-FEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKG 386
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
+++ + M E G +V Y++LIS + K+G ++ A R ++ +G ++ D +
Sbjct: 387 KMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFR-LMDEMGRKGLKMDDVTL 445
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHS 389
T +++ + + +L+ A++ G VD V +G +I + +A
Sbjct: 446 NT---MLRALCRERKLDEAHDLLCSARR---RGYFVDE-VSYGTLIIGYFKHEKASQALR 498
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ DEM + Y + C+ +T +A + ++ SGL D Y+ +I
Sbjct: 499 LWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYC 558
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
+ AF M E + T++ GL + E + + + +V
Sbjct: 559 QEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGK-DVDA 617
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+N+II + CK R +A L M + P+ TY +++ G A
Sbjct: 618 VSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDA 665
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 157/413 (38%), Gaps = 74/413 (17%)
Query: 216 MKPNIYACNAALEGCCY--GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
M+P + CN L S+ ++ V +GV+ N +SF L + ++
Sbjct: 155 MQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFG 214
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL----------------- 316
+ + + M ++G + Y++++ G K G L A R +LL
Sbjct: 215 EAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEA-RDLLLDMKNKGLFPNRTTFNIL 273
Query: 317 ---CLGGGNMEQSDFSKE------------TYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
C G ++++ E TY ++ GF + G + L E + L+
Sbjct: 274 VVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKL 333
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
S VV + +I+ C G S++ +++EM G Y +K + K+ + E
Sbjct: 334 SPDVVTYNT---LINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDE 390
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM----------------- 464
+ V + SG D+ Y+ LI AF L +M
Sbjct: 391 VDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLR 450
Query: 465 ---REARI---YDL------KG------SYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
RE ++ +DL +G SY T++ G ++ + DE+ E +
Sbjct: 451 ALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIP 510
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+NS+I C+ G+ A L ++ P++ TY ++I+GY Q
Sbjct: 511 -SIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQ 562
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 134/354 (37%), Gaps = 35/354 (9%)
Query: 182 GFLVDICRKNSNFVAFLKV--FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD 239
G L DI N+ KV +E R+ + +K + N L C + + +
Sbjct: 402 GCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRE-RKLDE 460
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A ++ + G +E S+G L Y + + L M E ++ Y+S+I+
Sbjct: 461 AHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIA 520
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKG---LANLIIEA 356
G ++G A + L G + + TY ++ G+ Q G V+ N ++E
Sbjct: 521 GLCQMGKTNQAIDKLDELLESGLVPD----EITYNTIIHGYCQEGQVEKAFQFHNKMVE- 575
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+ +P + + ++ G+ +KA + + + G V Y + + CKE
Sbjct: 576 KNFKPDVVTCNT-----LLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKE 630
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R EA L+ ++ L D Y+A++ + + A + E
Sbjct: 631 KRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEK--------- 681
Query: 477 LTIMTGLMENHRPEL---MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
G EN EL A E+ ++P +++ I+ C GR +D
Sbjct: 682 -----GKSENQFLELGKRQDARTSEIPQEPHPNAIA--YSNKINELCSQGRYKD 728
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 132/587 (22%), Positives = 232/587 (39%), Gaps = 94/587 (16%)
Query: 28 PSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEA 87
P FL+P F+ +R+ L P + + T T+L + LL + A
Sbjct: 2 PHGCHFLRPLSFTCRRRRLHSSLPRADGDGTEAGAATD---TTLLGRFTRLLLLHRFPAA 58
Query: 88 WKSFKSLTANSLFPSKPVTNSLIA--------------HLSSLQDNHNLKRAFASVVYVI 133
+ S S P+T +L+ HL L + + A +++++
Sbjct: 59 ERLLAS--------SSPLTPALLQAALRRVRLDPDAALHLFRLAPSRPSLVSHAQLLHIL 110
Query: 134 EKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYF--MPFELWGGFLVDICRKN 191
+ + F LL S+ A P F + ++++ F + F+L D + +
Sbjct: 111 ARARR---FHDARALLSSL--PPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLS 165
Query: 192 SNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD--AEKVIETMSV 249
S F + + CR P++ +CN L +QS A V M +
Sbjct: 166 SALNVFDGMGKVGCR-----------PSLRSCNRLLNKL---VQSGDPGMAAMVYGQMRI 211
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
GV P+E + +A Y G + VE M G +V Y +++ Y +G E
Sbjct: 212 AGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTED 271
Query: 310 ASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A R + ++++ S TY +VKG+ ++G ++ ++ E + E IVVD
Sbjct: 272 ARRIL------ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMK--ETGDIVVD 323
Query: 368 RSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
V +G+ I+ G D A + +EM G V L VY + CK R E +++
Sbjct: 324 -EVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVL 382
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
++ G++ D +Y+ LI+ + AF + R M + +Y T++ G
Sbjct: 383 QEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSL 442
Query: 487 HRPE-------LM------------AAFLDEVVEDPRVEVKTHDW--------------- 512
H + LM + LD + + + E + W
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITF 502
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
N++I+ CK GR+ +A+ L RM L+ P+ TY +L +GY Q
Sbjct: 503 NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQ 549
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 5/233 (2%)
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ K + ++G V A + +++E G+ V+ ++ +G ++ A IL+ +
Sbjct: 224 MAKAYCRDGRV---AQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQ 280
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG-LQLDVGNYDALIEASITSQDF 454
G S + Y +K YCK+ R EA ++V ++ +G + +D Y +I
Sbjct: 281 RKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRM 340
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A + +MR+A I+ Y T++ GL + R E + L E+ ED + + +N+
Sbjct: 341 DDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM-EDVGMRPDKYSYNT 399
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+I +C+ G + A R M+ TY +L+ G+ + L +W
Sbjct: 400 LIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLW 452
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 191/499 (38%), Gaps = 91/499 (18%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N++ N + G C L + + +KV++ M +G+RP++ S+ L Y +G K E+
Sbjct: 358 NLFVYNTMINGLCK-LGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEM 416
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
+M G ++ + Y++L+ G+ L ++ A R L L G + ++ S T ++
Sbjct: 417 CRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRG-VAPNEISCST---LLD 472
Query: 339 GFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
G + G + NL E A+ L + I + +I+ +G +A +LD M
Sbjct: 473 GLFKAGKTEQALNLWKETLARGLAKNVITFNT-----VINGLCKIGRMAEAEELLDRMKE 527
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQL------------------------------- 425
C Y YCK + AT L
Sbjct: 528 LRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHK 587
Query: 426 VMDI----SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM----------------- 464
V DI S+ GL ++ Y ALI + A +L+ +M
Sbjct: 588 VNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMS 647
Query: 465 ---REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV--VEDPRVEVKTHD----WNSI 515
+E ++ D L + + + +D++ V D + H WN I
Sbjct: 648 CFYKEGKV-DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVI 706
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA---EQYFSV--LMMWHEI 570
I CK+GR+ DAK + +F P++ TY SLI+G + ++ FS+ +M+ +
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766
Query: 571 KRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFME 630
I T ++ +Y L K G + + K Q + + Y E
Sbjct: 767 TPNIIT------------YNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDE 814
Query: 631 NHKKLKVAKLRKRNFKKME 649
K+ K + K K +E
Sbjct: 815 YCKEGKTTEAFKLKQKMVE 833
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 167/428 (39%), Gaps = 74/428 (17%)
Query: 193 NFVAFLKVFEECCRIA----LDENLDFMK-----PNIYACNAALEGCCYGLQSVSDAEKV 243
N + F V C+I +E LD MK P+ +G C L + A +
Sbjct: 498 NVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCK-LGQLGTATHL 556
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+ M LG P+ F + + K+ ++ S M+ G S +V Y +LI+G+ K
Sbjct: 557 MNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCK 616
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV---KGLANLIIEAQKLE 360
GNL A Y E+V + N NV L + + K++
Sbjct: 617 EGNLHEAC-------------------NLYFEMVNNGM-NPNVFICSALMSCFYKEGKVD 656
Query: 361 PSGIVVDRSVGFGIISAC-VNLGLSDKAHSILDEM---NACGCSVGLGVYVPTLKAYCKE 416
+ +V+ + V +I C ++ DK ++D + N +V V + L CK
Sbjct: 657 EANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGL---CKS 713
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R A+A L + + D Y +LI S AFSL M A + +Y
Sbjct: 714 GRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITY 773
Query: 477 LTIMTGLMENHR-----------------PELMA--AFLDEVVEDPR------------- 504
+++ GL ++ + P + +DE ++ +
Sbjct: 774 NSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVE 833
Query: 505 --VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
++ ++ +I+ C G +E+A + L +MI +PN TY +LI+GY+ +
Sbjct: 834 EGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEE 893
Query: 563 VLMMWHEI 570
+ ++ E+
Sbjct: 894 ISKLYDEM 901
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 129/321 (40%), Gaps = 28/321 (8%)
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
MS G+ PN ++G L + +G + L M G + + S+L+S + K G
Sbjct: 595 MSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGK 654
Query: 307 LESASRTI-----LLCLGGGNMEQSDFSKETYC--EVVKGFLQNGNVKGLANLIIEAQKL 359
++ A+ + + + G ++ + K ++ + G + NV + N+II L
Sbjct: 655 VDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANV--MWNVIIFG--L 710
Query: 360 EPSGIVVDRSVGF----------------GIISACVNLGLSDKAHSILDEMNACGCSVGL 403
SG + D F +I C G D+A S+ D M + G + +
Sbjct: 711 CKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNI 770
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y + CK + + A L + S G+ + Y+ LI+ AF L +
Sbjct: 771 ITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQK 830
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M E I +Y ++ GL E LD+++E+ V+ + ++IH + K+G
Sbjct: 831 MVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIEN-NVDPNYITYCTLIHGYIKSG 889
Query: 524 RLEDAKRTLRRMIFLQFEPND 544
+E+ + M P +
Sbjct: 890 NMEEISKLYDEMHIRGLLPTN 910
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 128/522 (24%), Positives = 218/522 (41%), Gaps = 60/522 (11%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPK--LLDFQT 144
A ++F+S+ A + PS V SLI + +D ++ A + V + E+ + L+ +
Sbjct: 313 ARQTFESMRARGIDPSSHVYTSLIHAYAVGRD---MEEALSCVRKMNEEGIEMSLVTYSI 369
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
V NA A F K N + ++G + C+ N + E
Sbjct: 370 VVGGFAKFGNAEAADCWFKKAKERHTN---LNAYIYGNIIYAYCQA-CNMDRAEALVREM 425
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEK---VIETMSVLGVRPNESSFGF 261
+D LD IY + ++G Y + + + EK V + + G P+ ++G
Sbjct: 426 EEEGIDAPLD-----IY--HTMMDG--YTM--IRNEEKCLIVFKRLKECGFAPSVITYGC 474
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA----------- 310
L +Y G K +E+ +M G M YS LI+G++KL + +A
Sbjct: 475 LINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDG 534
Query: 311 --------SRTILLCLGGGNMEQS-----DFSKE-------TYCEVVKGFLQNGNVKGLA 350
+ I G GNM+++ + KE T+ ++ GF + G ++
Sbjct: 535 LKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRAL 594
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
+ + SG + ++ V +KA ILDEM G S Y +
Sbjct: 595 EIF---DMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIM 651
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
Y T +A + + + GLQLDV Y+AL++A S QSA ++ R+M +I
Sbjct: 652 HGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIP 711
Query: 471 DLKGSYLTIMTGLMENHRPELM-AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
Y ++ G R ++ AA L + + V+ H + S I+A CKAG + A
Sbjct: 712 RNTFVYNILIDGWAR--RGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRAT 769
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+T+ M +PN +TY +LI+G+ A L + E+K
Sbjct: 770 KTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELK 811
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 139/333 (41%), Gaps = 43/333 (12%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A + E+M G+ P+ + L + YA+ E+ + MNE G +V YS ++
Sbjct: 313 ARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVG 372
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
G+ K GN E+A ++ + Y ++ + Q N+ L+ E +
Sbjct: 373 GFAKFGNAEAAD----CWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVRE---M 425
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
E GI + ++ + +K + + CG + + Y + Y K +
Sbjct: 426 EEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKV 485
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
++A ++ + S G++ ++ Y LI + +D+ +AF++F D+ I
Sbjct: 486 SKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDV--------------I 531
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
GL +P+++ +N+II AFC G ++ A ++ M +
Sbjct: 532 KDGL----KPDVVL------------------YNNIIKAFCGMGNMDRAIHMVKEMQKER 569
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
P +T++ +I+G+ A + L ++ ++R
Sbjct: 570 CRPTSRTFMPIIHGFARAGEMRRALEIFDMMRR 602
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 123/293 (41%), Gaps = 23/293 (7%)
Query: 188 CRKNS-NFVAFLKVFEEC--CRIALDENLDFMK-----PNIYACNAALEGCCYGLQSVSD 239
CR S F+ + F R AL E D M+ P ++ NA + G + +
Sbjct: 570 CRPTSRTFMPIIHGFARAGEMRRAL-EIFDMMRRSGCIPTVHTFNALVLGLVEK-RKMEK 627
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A ++++ M++ GV P+E ++ + + YA G K E + M G + Y +L+
Sbjct: 628 AVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLK 687
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
K G ++SA L N ++ + Y ++ G+ + G++ A+L+ Q++
Sbjct: 688 ACCKSGRMQSA----LAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLM---QQM 740
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
G+ D I+AC G +A ++EM A G + Y + +
Sbjct: 741 NQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLP 800
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF------SLFRDMRE 466
+A ++ +GL+ D Y L+ + ++ A+ S+ R+M E
Sbjct: 801 EKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAEAYIYSGILSICREMIE 853
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 130/327 (39%), Gaps = 47/327 (14%)
Query: 196 AFLKVFEECCRIALDENL--DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR 253
FLK+ + A+ E++ D +KP++ N ++ C G+ ++ A +++ M R
Sbjct: 513 GFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFC-GMGNMDRAIHMVKEMQKERCR 571
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT 313
P +F + + +A G + +E+ +M G + +++L+ G V+ +E A
Sbjct: 572 PTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEI 631
Query: 314 I-LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
+ + L G + ++ TY ++ G+ G+ K+ G+ +D
Sbjct: 632 LDEMALAGVSPDE-----HTYTTIMHGYAALGDTGKAFEYFT---KMRNEGLQLDVFTYE 683
Query: 373 GIISACVNLGLSDKAHSILDEMNAC----------------------------------- 397
++ AC G A ++ EMNA
Sbjct: 684 ALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQE 743
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + Y + A CK AT+ + ++ ++G++ +V Y LI + + A
Sbjct: 744 GVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKA 803
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLM 484
S F +++ A + K Y +MT L+
Sbjct: 804 LSCFEELKLAGLKPDKAVYHCLMTSLL 830
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 159/374 (42%), Gaps = 40/374 (10%)
Query: 233 GLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
G V D +K V E G+ P+ ++G L LYA G K +E+ M G
Sbjct: 460 GYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKH 519
Query: 290 QMVFYSSLISGYVKLGNLESA-------------------SRTILLCLGGGNMEQS---- 326
M YS LI+G++KL + +A + I G G M+++
Sbjct: 520 NMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTV 579
Query: 327 -DFSKE-------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
+ K+ T+ ++ GF + G +K ++ + SG + +I
Sbjct: 580 KEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVF---DMMRMSGCIPTVHTYNALILGL 636
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
V +KA ILDEM G S Y + Y T +A + GLQLDV
Sbjct: 637 VEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDV 696
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM-AAFLD 497
Y+AL++A S QSA ++ ++M I Y ++ G R ++ AA L
Sbjct: 697 YTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWA--RRGDIWEAADLM 754
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ ++ V+ H + S I+A KAG ++ A +T+ M + +PN +TY +LING+ A
Sbjct: 755 QQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARA 814
Query: 558 EQYFSVLMMWHEIK 571
L + E+K
Sbjct: 815 SLPEKALSCFEEMK 828
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 135/316 (42%), Gaps = 43/316 (13%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A + E M G+ P+ + L + YA+ E+ + M E G +V YS L+S
Sbjct: 330 ARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVS 389
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
G+ K GN ESA + S + Y ++ + Q N+ L+ E +
Sbjct: 390 GFAKTGNAESADH----WFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVRE---M 442
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
E GI + ++ +G DK + + CG + + Y + Y K +
Sbjct: 443 EEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKV 502
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
++A ++ ++ +G++ ++ Y LI + +D+ +AF++F D+ I
Sbjct: 503 SKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDL--------------I 548
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
G+ +P+++ +N+II AFC G+++ A T++ M +
Sbjct: 549 KDGI----KPDVVL------------------YNNIITAFCGMGKMDRAVCTVKEMQKQR 586
Query: 540 FEPNDQTYLSLINGYV 555
+P +T++ +I+G+
Sbjct: 587 HKPTTRTFMPIIHGFA 602
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 158/384 (41%), Gaps = 19/384 (4%)
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
++ AE ++ M G+ + + Y + G ++K + + E G + ++ Y
Sbjct: 431 NMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYG 490
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK--ETYCEVVKGFLQNGNVKGLANLI 353
LI+ Y KLG + A ME + +TY ++ GFL+ +K AN
Sbjct: 491 CLINLYAKLGKVSKALEV------SKEMEHAGIKHNMKTYSMLINGFLK---LKDWANAF 541
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ L GI D + II+A +G D+A + EM ++P + +
Sbjct: 542 AIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGF 601
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
++ +A + + SG V Y+ALI + + + A + +M A + +
Sbjct: 602 ARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNE 661
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y TIM G + ++ D +++ + + +++ A CK+GR++ A +
Sbjct: 662 HTYTTIMHGYASLGDTGKAFTYFTKL-RDEGLQLDVYTYEALLKACCKSGRMQSALAVTK 720
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
M N Y LI+G+ + + ++KR +G++ + + +F+
Sbjct: 721 EMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKR-------EGVQPDIHTYTSFI 773
Query: 594 YALVKGGFFDAVMQVVEKSQEMKV 617
A K G + +E+ + + V
Sbjct: 774 NACSKAGDMQRATKTIEEMKSVGV 797
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 103/228 (45%), Gaps = 8/228 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P ++ NA + G + + AE++++ M++ GV PNE ++ + + YA G K
Sbjct: 624 PTVHTYNALILGLVEK-RKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFT 682
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ + + G + Y +L+ K G ++SA + + N+ ++ F Y ++
Sbjct: 683 YFTKLRDEGLQLDVYTYEALLKACCKSGRMQSA-LAVTKEMSAQNIPRNTF---IYNILI 738
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G+ + G++ A+L+ Q+++ G+ D I+AC G +A ++EM +
Sbjct: 739 DGWARRGDIWEAADLM---QQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSV 795
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
G + Y + + + +A ++ SGL+ D Y L+
Sbjct: 796 GVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLM 843
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 159/374 (42%), Gaps = 40/374 (10%)
Query: 233 GLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
G V D +K V E G+ P+ ++G L LYA G K +E+ M G
Sbjct: 62 GYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKH 121
Query: 290 QMVFYSSLISGYVKLGNLESA-------------------SRTILLCLGGGNMEQS---- 326
M YS LI+G++KL + +A + I G G M+++
Sbjct: 122 NMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTV 181
Query: 327 -DFSKE-------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
+ K+ T+ ++ GF + G +K ++ + SG + +I
Sbjct: 182 KEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVF---DMMRMSGCIPTVHTYNALILGL 238
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
V +KA ILDEM G S Y + Y T +A + GLQLDV
Sbjct: 239 VEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDV 298
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM-AAFLD 497
Y+AL++A S QSA ++ ++M I Y ++ G R ++ AA L
Sbjct: 299 YTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWAR--RGDVWEAADLM 356
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ ++ V+ H + S I+A KAG ++ A +T+ M + +PN +TY +LING+ A
Sbjct: 357 QQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARA 416
Query: 558 EQYFSVLMMWHEIK 571
L + E+K
Sbjct: 417 SLPEKALSCFEEMK 430
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 157/380 (41%), Gaps = 19/380 (5%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AE ++ M G+ + + Y + G ++K + + E G + ++ Y LI+
Sbjct: 37 AEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLIN 96
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSK--ETYCEVVKGFLQNGNVKGLANLIIEAQ 357
Y KLG + A ME + +TY ++ GFL+ +K AN +
Sbjct: 97 LYAKLGKVSKALEV------SKEMEHAGIKHNMKTYSMLINGFLK---LKDWANAFAIFE 147
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
L GI D + II+A +G D+A + EM ++P + + ++
Sbjct: 148 DLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKG 207
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+A + + SG V Y+ALI + + + A + +M A + + +Y
Sbjct: 208 EMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYT 267
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
TIM G A+ ++ D +++ + + +++ A CK+GR++ A + M
Sbjct: 268 TIMHGYASLGDTGKAFAYFTKL-RDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSA 326
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALV 597
N Y LI+G+ + + ++KR +G++ + + +F+ A
Sbjct: 327 QNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKR-------EGVQPDIHTYTSFINACS 379
Query: 598 KGGFFDAVMQVVEKSQEMKV 617
K G + +E+ + + V
Sbjct: 380 KAGDMQRATKTIEEMKSVGV 399
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 103/228 (45%), Gaps = 8/228 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P ++ NA + G + + AE++++ M++ GV PNE ++ + + YA G K
Sbjct: 226 PTVHTYNALILGLVEK-RKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFA 284
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ + + G + Y +L+ K G ++SA + + N+ ++ F Y ++
Sbjct: 285 YFTKLRDEGLQLDVYTYEALLKACCKSGRMQSA-LAVTKEMSAQNIPRNTF---IYNILI 340
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G+ + G+V A+L+ Q+++ G+ D I+AC G +A ++EM +
Sbjct: 341 DGWARRGDVWEAADLM---QQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSV 397
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
G + Y + + + +A ++ SGL+ D Y L+
Sbjct: 398 GVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLM 445
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 100/231 (43%), Gaps = 39/231 (16%)
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ S + Y ++ + Q N+ L+ E +E GI + ++ +G
Sbjct: 12 KHSSLNAIIYGNIIYAYCQRCNMDKAEALVRE---MEEEGIDAPIDIYHTMMDGYTMVGD 68
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
DK + + CG + + Y + Y K + ++A ++ ++ +G++ ++ Y
Sbjct: 69 EDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSM 128
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI + +D+ +AF++F D+ I G+ +P+++
Sbjct: 129 LINGFLKLKDWANAFAIFEDL--------------IKDGI----KPDVVL---------- 160
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N+II AFC G+++ A T++ M + +P +T++ +I+G+
Sbjct: 161 --------YNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGF 203
>gi|186511969|ref|NP_001119002.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635613|sp|B3H672.1|PP317_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g17616
gi|332658523|gb|AEE83923.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 674
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 126/602 (20%), Positives = 257/602 (42%), Gaps = 52/602 (8%)
Query: 71 LETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVV 130
L+ L +L + D+AW FK FP + N + LS D L +A
Sbjct: 57 LKKKLETALKDHRVDDAWDVFKDFKRLYGFPESVIMNRFVTVLSYSSDAGWLCKASDLTR 116
Query: 131 YVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRK 190
+++NP +L + L S+ A A ++++ M + Y + ++ ++ + +
Sbjct: 117 LALKQNPGMLSGDVLTKLSLSLARAQMVESACSILRIMLEKGYVLTSDVLRLVVMHMVKT 176
Query: 191 NSNFVAFLKVFEECCRIALDENL--------DFMKPNIYACNAALEGCCYGLQSVSDAEK 242
+ C ++ N+ + +KP+ N L G C ++
Sbjct: 177 EIGTCLASNYLVQVCDRFVEFNVGKRNSSPGNVVKPDTVLFNLVL-GSCVRFGFSLKGQE 235
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG-FSSQMV-----FYSS 296
+IE M+ + V + S ++ +Y + G+++ EL G Q++ F+ +
Sbjct: 236 LIELMAKVDVVADAYSIVIMSCIYEMNGMRD---ELRKFKEHIGQVPPQLLGHYQHFFDN 292
Query: 297 LISGYVKLGNLESASRTIL-LCLGG--GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
L+S K ++ SA R L +C ++E F E L G+ + L
Sbjct: 293 LLSLEFKFDDIGSAGRLALDMCKSKVLVSVENLGFDSEK-----PRVLPVGSHHIRSGLK 347
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVN-----LGLSDKA----------HSILDEMNACG 398
I + P + D S+G + VN LG+++K H L E++
Sbjct: 348 IH---ISPKLLQRDSSLGVDTEATFVNYSNSKLGITNKTLAKLVYGYKRHDNLPELSKLL 404
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVM-DISSSGLQLDVGNYDALIEASITSQDFQSA 457
S+G + C EA ++ D++S+G +++ Y ++ S+ ++A
Sbjct: 405 FSLGGSRLCADVIDACVAIGWLEAAHDILDDMNSAGYPMELATYRMVLSGYYKSKMLRNA 464
Query: 458 FSLFRDMREARIYDLKGSYLTIM--TGLMENHRPELMAAFLDEVVEDPRVEVKT--HDWN 513
L + M +A + + + + T ++ EL + E+ +++ + ++ N
Sbjct: 465 EVLLKQMTKAGLITDPSNEIVVSPETEEKDSENTELRDLLVQEINAGKQMKAPSMLYELN 524
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
S ++ FCKA DA T R++ ++ P Q++ LI+ Y + Y + ++W +IKR
Sbjct: 525 SSLYYFCKAKMQGDALITYRKIPKMKIPPTVQSFWILIDMYSSLGMYREITIVWGDIKRN 584
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHK 633
I++ K +K +L++ + ++GG+F+ VM+++ +E ++ D YK +++ HK
Sbjct: 585 IAS---KNLKTTQDLLEKLVVNFLRGGYFERVMELISYMKENDMYNDLTMYKNEYLKLHK 641
Query: 634 KL 635
L
Sbjct: 642 NL 643
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 160/374 (42%), Gaps = 40/374 (10%)
Query: 233 GLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
G + + EK V + + G P+ S+G L +Y G K +E+ +M G
Sbjct: 422 GYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKH 481
Query: 290 QMVFYSSLISGYVKLGNLESA-------------------SRTILLCLGGGNMEQSDF-- 328
M YS LI+G++KL + +A + I G GNM+++
Sbjct: 482 NMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMV 541
Query: 329 ----------SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
+ T+ ++ GF + G ++ + + SG + ++
Sbjct: 542 KEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIF---DMMRRSGCIPTVHTFNALVLGL 598
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
V +KA ILDEM G S Y + Y T +A + + + GL+LDV
Sbjct: 599 VEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDV 658
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM-AAFLD 497
Y+AL++A S QSA ++ R+M I Y ++ G R ++ AA L
Sbjct: 659 FTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWA--RRGDVWEAADLM 716
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ ++ V+ H + S I+A CKAG + A +T++ M L +PN +TY +LI+G+ A
Sbjct: 717 QQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACA 776
Query: 558 EQYFSVLMMWHEIK 571
L + E+K
Sbjct: 777 SLPEKALRCFEEMK 790
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 135/323 (41%), Gaps = 43/323 (13%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+P FG + YA +G + + M G Y+SLI Y ++E A
Sbjct: 299 KPARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEA-- 356
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE---AQKLEPSGIVVDRS 369
L C+ E + S TY VV GF + GN N+ +++E GI
Sbjct: 357 --LSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPID 414
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
+ +++ +G +K + + CG + + Y + Y K + ++A ++ +
Sbjct: 415 IYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMM 474
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
S+G++ ++ Y LI + +D+ +AF++F D+ I GL +P
Sbjct: 475 ESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDV--------------IKDGL----KP 516
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+++ +N+II AFC G ++ A ++ M + P +T++
Sbjct: 517 DVVL------------------YNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMP 558
Query: 550 LINGYVTAEQYFSVLMMWHEIKR 572
+I+G+ A + L ++ ++R
Sbjct: 559 IIHGFARAGEMRRALEIFDMMRR 581
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 153/381 (40%), Gaps = 27/381 (7%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A + E+M V G+ P+ + L + YA+ E+ + M E G +V YS ++
Sbjct: 321 ARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVG 380
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQS--DFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
G+ K+GN + + ME+ D + Y ++ G+ GN + +I +
Sbjct: 381 GFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEE---KCLIVFK 437
Query: 358 KLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+L+ G + +G +I+ +G KA + M + G + Y + + K
Sbjct: 438 RLKECGFAPS-VISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKL 496
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
A + D+ GL+ DV Y+ +I+A + A + ++M++ R ++
Sbjct: 497 KDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTF 556
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+ I+ G D + + H +N+++ + ++E A L M
Sbjct: 557 MPIIHGFARAGEMRRALEIFDMMRRSGCIPT-VHTFNALVLGLVEKRQMEKAVEILDEMA 615
Query: 537 FLQFEPNDQTYLSLINGYVT------AEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVD 590
P++ TY +++NGY A +YF+ L +G++ + +
Sbjct: 616 LAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLR-------------NEGLELDVFTYE 662
Query: 591 AFLYALVKGGFFDAVMQVVEK 611
A L A K G + + V +
Sbjct: 663 ALLKACCKSGRMQSALAVTRE 683
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 157/387 (40%), Gaps = 34/387 (8%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AE ++ M G+ + + Y + G +EK + + + E GF+ ++ Y LI+
Sbjct: 397 AESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLIN 456
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
Y K+G + A + G + +TY ++ GFL+ +K N + +
Sbjct: 457 MYTKMGKVSKALEVSKMMESAG----IKHNMKTYSMLINGFLK---LKDWTNAFTVFEDV 509
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
G+ D + II A +G D+A ++ EM ++P + + +
Sbjct: 510 IKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEM 569
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A ++ + SG V ++AL+ + + + A + +M A + + +Y TI
Sbjct: 570 RRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTI 629
Query: 480 MTGLMENHRPELMAAFLDE--------VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
M G AA D + + +E+ + +++ A CK+GR++ A
Sbjct: 630 MNGY---------AALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAV 680
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDA 591
R M N Y LI+G+ + + ++K Q+G++ + + +
Sbjct: 681 TREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMK-------QEGVQPDIHTYTS 733
Query: 592 FLYALVKGGFFDAVMQVVEKSQEMKVF 618
F+ A K G +++ + QEM+
Sbjct: 734 FINACCKAG---DMLRATKTIQEMEAL 757
>gi|147773546|emb|CAN61142.1| hypothetical protein VITISV_004317 [Vitis vinifera]
Length = 854
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 152/345 (44%), Gaps = 70/345 (20%)
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQK----LEPSGIVVDRSVGFGIISACVNLGL 383
S + ++V + +G + L+ L++ QK LE G++ D +I AC+ LG
Sbjct: 569 LSNKALVKLVIAYQGDGRIGELSRLMLSLQKELGTLEGGGLISD------VIDACIQLGW 622
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
+ AH ILD+M G +G Y+ L AY K EA L+ + +G +D+ +
Sbjct: 623 LETAHGILDDMELAGAPIGSSTYMSLLTAYYKGKMAREAKALLKQMRKAGFVVDLSD--- 679
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
E +T T + G+++ +R
Sbjct: 680 --EMVMT---------------------------TCLLGVVDKNR--------------- 695
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ--FEPNDQTYLSLINGYVTAEQYF 561
+ T SI ++ +++ K+ + ++ ++ EP QT ++L+ GY Y
Sbjct: 696 ---MHTRTSTSIGNSGLAESLVQEMKKXEKXILPVETEIEPTVQTSINLVYGYSCLNMYR 752
Query: 562 SVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
+ ++W IKR + + +L + + ++GG+F+ VM+V+ +E ++ DK
Sbjct: 753 EITILWGNIKRSRESGS---LVVCRDLYEFLVLNFLRGGYFERVMEVIGHMKEQNMYCDK 809
Query: 622 WKYKQAFMENHK----KLKVAKLR-KRNFKKMEALIAFKNWAGLN 661
W YK F++ HK LK + R + K++E + AF+ WAG++
Sbjct: 810 WMYKSEFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRKWAGID 854
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 149/348 (42%), Gaps = 41/348 (11%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A++ I M LGV+PN ++ + + + L+G ++ + M + G Y+S IS
Sbjct: 235 AKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFIS 294
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV------------K 347
G K G LE AS I L GG + + TY ++ G+ G++ K
Sbjct: 295 GLCKEGRLEEASGLICKMLEGGLVPNA----VTYNALIDGYCNKGDLDKAYAYRDEMISK 350
Query: 348 GLA------NLIIEA--------------QKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
G+ NL I A +++ G++ D +I+ G + +A
Sbjct: 351 GIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRA 410
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+LDEM G L Y + K +R EA L I GL D+ ++ALI+
Sbjct: 411 FGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDG 470
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ + AF L ++M ++ + +Y T+M G + E LDE+ R +
Sbjct: 471 HCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEM---KRRGI 527
Query: 508 KTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
K +N++I + K G ++DA R M+ F+P TY +LI G
Sbjct: 528 KPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQG 575
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 161/386 (41%), Gaps = 22/386 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PNI CN L L A + M + +R + +F + + +G +K E
Sbjct: 179 PNIETCNQML-SLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKE 237
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M G +V Y+++I G+ G + A R I + +E + TY +
Sbjct: 238 FIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRA-RVIFQTMKDKGLEPDCY---TYNSFI 293
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + G ++ + LI K+ G+V + +I N G DKA++ DEM +
Sbjct: 294 SGLCKEGRLEEASGLIC---KMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISK 350
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G L Y + A E R +A ++ ++ G+ D ++ LI D + A
Sbjct: 351 GIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRA 410
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNS 514
F L +M I +Y +++ L + +R + A ++ ++ P + V +N+
Sbjct: 411 FGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIV----FNA 466
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+I C G ++ A + L+ M ++ P++ TY +L+ GY + + E+KR
Sbjct: 467 LIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKR-- 524
Query: 575 STDGQKGIKFEHNLVDAFLYALVKGG 600
+GIK +H + + K G
Sbjct: 525 -----RGIKPDHISYNTLISGYSKRG 545
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 14/244 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
M P+ N + G C DA++ +++ M G++P ++ L Y+ +
Sbjct: 387 MMPDAVTHNILINGYC----RCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
++ L S + + G ++ +++LI G+ GN++ R L NM+ + T
Sbjct: 443 KEADALFSKIQQEGLLPDIIVFNALIDGHCANGNID---RAFQLLKEMDNMKVLP-DEIT 498
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y +++G+ + G V+ L+ E ++ GI D +IS G A + D
Sbjct: 499 YNTLMQGYCREGKVEEARQLLDEMKR---RGIKPDHISYNTLISGYSKRGDMKDAFRVRD 555
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM G + Y ++ CK A +L+ ++ S G+ D Y ++IEA T
Sbjct: 556 EMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVD 615
Query: 453 DFQS 456
D +
Sbjct: 616 DLEG 619
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 103/261 (39%), Gaps = 16/261 (6%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A I M G Y + CKE R EA+ L+ + GL + Y+ALI
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ D A++ +M I +Y + L R + E+ E +
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM 388
Query: 506 -EVKTHDWNSIIHAFCKAGRLEDAKRT---LRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
+ TH N +I+ +C+ G DAKR L M+ +P TY SLI YV ++
Sbjct: 389 PDAVTH--NILINGYCRCG---DAKRAFGLLDEMVGKGIQPTLVTYTSLI--YVLGKRN- 440
Query: 562 SVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
E S Q+G+ + + +A + G D Q++++ MKV D+
Sbjct: 441 ----RMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDE 496
Query: 622 WKYKQAFMENHKKLKVAKLRK 642
Y ++ KV + R+
Sbjct: 497 ITYNTLMQGYCREGKVEEARQ 517
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 101/249 (40%), Gaps = 11/249 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ DA+ +I+ M G+ P+ + L Y G ++ L M G +V Y+S
Sbjct: 372 MGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTS 431
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
LI K ++ A ++Q + + ++ G NGN+ L+
Sbjct: 432 LIYVLGKRNRMKEADALF------SKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLK 485
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
E ++ ++ D ++ G ++A +LDEM G Y + Y
Sbjct: 486 EMDNMK---VLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYS 542
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
K +A ++ ++ ++G + Y+ALI+ +Q+ + A L ++M I
Sbjct: 543 KRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDS 602
Query: 475 SYLTIMTGL 483
+YL+I+ +
Sbjct: 603 TYLSIIEAM 611
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 159/374 (42%), Gaps = 40/374 (10%)
Query: 233 GLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
G V + EK V E + G P+ S+G L LYA G K +E+ +M G
Sbjct: 455 GYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKH 514
Query: 290 QMVFYSSLISGYVKLGNLESA-------------------SRTILLCLGGGNMEQS---- 326
M YS LI+G++KL + +A + I G G M+++
Sbjct: 515 NMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMV 574
Query: 327 -DFSKE-------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
+ KE T+ ++ GF + G +K ++ + SG + +I
Sbjct: 575 KEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVF---DMMRRSGCIPTVHTFNALILGL 631
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
V +KA ILDEM G S Y + Y T +A + + GLQLDV
Sbjct: 632 VEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDV 691
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM-AAFLD 497
Y+AL++A S QSA ++ ++M I Y ++ G R ++ AA L
Sbjct: 692 YTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWAR--RGDVWEAADLM 749
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ ++ V+ H + S I+A CKAG + A + + M +PN +TY +LI+G+ A
Sbjct: 750 QQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARA 809
Query: 558 EQYFSVLMMWHEIK 571
L + E+K
Sbjct: 810 SLPEKALRCFQEMK 823
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 142/333 (42%), Gaps = 43/333 (12%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A + E+M G+ P + L + YA+ E+ + M E G +V YS ++
Sbjct: 325 ARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVG 384
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
G+ K+GN ++A R S + Y ++ + Q N+ L+ E +
Sbjct: 385 GFAKIGNADAADR----WFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVRE---M 437
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
E GI + ++ +G +K ++ + + CG + + Y + Y K +
Sbjct: 438 EGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKI 497
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
++A ++ + S+G++ ++ Y LI + +D+ +AF++F D+ +
Sbjct: 498 SKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDV--------------V 543
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
GL +P+++ +N+II AFC G ++ A ++ M +
Sbjct: 544 KDGL----KPDVVL------------------YNNIIRAFCGMGTMDRAICMVKEMQKER 581
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
P +T++ +I+G+ A + L ++ ++R
Sbjct: 582 HRPTSRTFMPIIHGFARAGEMKRALDVFDMMRR 614
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 152/376 (40%), Gaps = 37/376 (9%)
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
++ AE ++ M G+ + + Y + G +EK + + + E GF+ +V Y
Sbjct: 426 NMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYG 485
Query: 296 SLISGYVKLGNLESASRTILLCLGGG---NMEQSDFSKETYCEVVKGFLQNGNVKGLANL 352
LI+ Y K+G + A + G NM+ TY ++ GFL+ +K AN
Sbjct: 486 CLINLYAKVGKISKALEVSKMMESAGIKHNMK-------TYSMLINGFLK---LKDWANA 535
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ + G+ D + II A +G D+A ++ EM ++P +
Sbjct: 536 FAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHG 595
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
+ + A + + SG V ++ALI + + + A + +M A +
Sbjct: 596 FARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPN 655
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDE--------VVEDPRVEVKTHDWNSIIHAFCKAGR 524
+ +Y TIM G AA D + D +++ + + +++ A CK+GR
Sbjct: 656 EHTYTTIMHGY---------AALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGR 706
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF 584
++ A + M N Y LI+G+ + + ++K Q G+K
Sbjct: 707 MQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMK-------QGGVKP 759
Query: 585 EHNLVDAFLYALVKGG 600
+ + +F+ A K G
Sbjct: 760 DIHTYTSFINACCKAG 775
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 109/241 (45%), Gaps = 8/241 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P ++ NA + G Q + A ++++ M++ GV PNE ++ + + YA G K E
Sbjct: 619 PTVHTFNALILGLVEKRQ-MEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFE 677
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ + + G + Y +L+ K G ++SA + + N+ ++ F Y ++
Sbjct: 678 YFTKLRDEGLQLDVYTYEALLKACCKSGRMQSAL-AVTKEMSAQNIPRNTF---VYNILI 733
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G+ + G+V A+L+ Q+++ G+ D I+AC G +A +++EM
Sbjct: 734 DGWARRGDVWEAADLM---QQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETS 790
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + Y + + + +A + ++ +GL+ D Y L+ A ++ A
Sbjct: 791 GVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEA 850
Query: 458 F 458
+
Sbjct: 851 Y 851
>gi|242077462|ref|XP_002448667.1| hypothetical protein SORBIDRAFT_06g031150 [Sorghum bicolor]
gi|241939850|gb|EES12995.1| hypothetical protein SORBIDRAFT_06g031150 [Sorghum bicolor]
Length = 257
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 136/285 (47%), Gaps = 34/285 (11%)
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
+G AH I+D++ + G VG+ Y+ L+AY KE+++ E L+ I
Sbjct: 1 MGWLHSAHDIIDDLESAGIPVGITGYISLLRAYEKENKSEEFNCLLQQIQK--------- 51
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
I +++ S F++ +++ + Y++ S L AA DE+
Sbjct: 52 ----IASTMDDIHTNSPFTI-KNIAKVVKYEIPLS------------SSSLFAALADEIK 94
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
E T ++N+ + FCKA +EDA T +RM P T+ ++ GY + + +
Sbjct: 95 HYKPEEHLTLEFNNSVLFFCKAKMMEDALCTYKRMREQNIRPTSHTFCHILRGYSSMDMH 154
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
+ M+W EIKR++ + +L+D + +KGG+F VM+++ + ++ D
Sbjct: 155 REITMLWGEIKRRLEYGELDLDR---DLLDCLVLNFLKGGYFSRVMEIISYMSKHNIYCD 211
Query: 621 KWKYKQAFMENHKKL-----KVAKLRKRNFKKMEALIAFKNWAGL 660
KWKY+ AF++ HK L + + K++E + AF+ WA +
Sbjct: 212 KWKYRHAFLKLHKNLYRNLNSLHDKTEAQSKRIEDVRAFRLWASI 256
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 182/429 (42%), Gaps = 53/429 (12%)
Query: 233 GLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
G V+D +K V + + G P ++G L LY G K +E+ +M E G
Sbjct: 456 GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH 515
Query: 290 QMVFYSSLISGYVKLGNLESA-------------------SRTILLCLGGGNMEQS---- 326
+ YS +I+G+VKL + +A + I G GNM+++
Sbjct: 516 NLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTV 575
Query: 327 --------DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
+ T+ ++ G+ ++G+++ + + G V G+I+
Sbjct: 576 KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF---DMMRRCGCVPTVHTFNGLINGL 632
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
V +KA ILDEM G S Y ++ Y T +A + + + GL +D+
Sbjct: 633 VEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDI 692
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM-AAFLD 497
Y+AL++A S QSA ++ ++M I Y ++ G R ++ AA L
Sbjct: 693 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWAR--RGDVWEAADLI 750
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ ++ V+ H + S I A KAG + A +T+ M L +PN +TY +LI G+ A
Sbjct: 751 QQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARA 810
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFE----HNLVDAFL--YALVKGGFFDAVMQVVEK 611
L + E+K GIK + H L+ + L ++ + + VM + ++
Sbjct: 811 SLPEKALSCYEEMK-------AMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKE 863
Query: 612 SQEMKVFVD 620
E + VD
Sbjct: 864 MVEAGLIVD 872
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 127/303 (41%), Gaps = 10/303 (3%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+P+ + FG + Y +G + E M G + Y+SLI Y +++ A
Sbjct: 304 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA-- 361
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
L C+ E + S TY +V GF + G+ + EA+++ + ++ S+
Sbjct: 362 --LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT---LNASIYG 416
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
II A ++A +++ EM G + +Y + Y + + +
Sbjct: 417 KIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKEC 476
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME-NHRPEL 491
G V Y LI A + R M+E + +Y ++ G ++
Sbjct: 477 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 536
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
A F D V E + +V +N+II AFC G ++ A +T++ M L+ P +T++ +I
Sbjct: 537 FAVFEDMVKEGMKPDVIL--YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 594
Query: 552 NGY 554
+GY
Sbjct: 595 HGY 597
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 165/358 (46%), Gaps = 10/358 (2%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+++ N+ ++G + + +AE+ + G+ P+E ++ L + Y G EK
Sbjct: 519 VHPDLFCYNSLIKGLST-VGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKA 577
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+L M G Y+ L+ GY K + E S + LG G+ + Y
Sbjct: 578 DQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDN----HIYGI 633
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V++ ++ N++ ++ E +K +G+V D + +IS + +KA +LDEM
Sbjct: 634 VIRNLSRSENMEVAFMVLTEVEK---NGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMA 690
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G G+ Y + +C+ + A + I + GL + Y ALI+ + + D
Sbjct: 691 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDIT 750
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
AF L+++M + I Y + TG + E A FL E + + R +N++
Sbjct: 751 DAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLE-QALFLTEEMFN-RGYANVSLFNTL 808
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+H FCK G+L++ ++ L M+ + PN QT +++ + A + ++ E+++K
Sbjct: 809 VHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 189/490 (38%), Gaps = 86/490 (17%)
Query: 93 SLTANSLFP-----------SKPVTNSLIAHLS-SLQDNHNLKRAFASVVYVIEKNPKLL 140
SL A SLFP + P ++A + ++QD + R+ + V++ L+
Sbjct: 124 SLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPSTAVLDV---LV 180
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFE-LWGGFLVDICRKNS-NFVAFL 198
D + GS+RNA A V M + P G L D+ R ++ + L
Sbjct: 181 D---TYKKTGSVRNA-------AQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
K F E I P++Y + +E C + A+KV E M NE +
Sbjct: 231 KGFMEGAGIL---------PDVYTYSTFIEAHCKA-RDFDAAKKVFEEMRRRDCAMNEVT 280
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ + G E+ + M ++G S Y +L++G LC
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNG---------------LCK 325
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
G E E C +K N+++ G +VD GF
Sbjct: 326 GSRLKEAKALLDEMSCSGLK-----------PNIVV-------YGTLVD---GF------ 358
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
+ G + +A IL EM + G +Y ++ CK + A++L+ ++ GL+ D
Sbjct: 359 MKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDT 418
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
Y+ L++ D AF L +MR + I SY ++ GL +N + L+E
Sbjct: 419 FTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEE 478
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT-- 556
++ + ++ + +I K G + A L +M P+ Y SLI G T
Sbjct: 479 MISE-GLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVG 537
Query: 557 ----AEQYFS 562
AE+Y++
Sbjct: 538 RMEEAEEYYA 547
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 129/574 (22%), Positives = 236/574 (41%), Gaps = 67/574 (11%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVH 146
A ++F+ + A + P+ + SLI + +D ++ A + V + E+ ++ T
Sbjct: 329 ARETFERMRARGITPTSRIYTSLIHAYAVGRD---MEEALSCVRKMKEEGIEM-SLVTYS 384
Query: 147 TLLGSMRNANTAAPA---FALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
++G A A A F K + K + ++G + C+ ++ E
Sbjct: 385 VIVGGFSKAGNAEAADHWFDEAKRIHKT---LNASIYGKIIYAHCQ-----TCNMERAEA 436
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEK---VIETMSVLGVRPNESSFG 260
R +E +D A A G V+D +K V + + G P ++G
Sbjct: 437 LVREMEEEGID-------APIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYG 489
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA---------- 310
L LY G K +E+ +M E G + YS +I+G+VKL + +A
Sbjct: 490 CLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE 549
Query: 311 ---------SRTILLCLGGGNMEQS------------DFSKETYCEVVKGFLQNGNVKGL 349
+ I G GNM+++ + T+ ++ GF ++G+++
Sbjct: 550 GMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRS 609
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
+ + G V +I+ V +KA ILDEM G S Y
Sbjct: 610 LEVF---DMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 666
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ Y T +A + + + GL++D+ Y+AL++A S QSA ++ ++M I
Sbjct: 667 MQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI 726
Query: 470 YDLKGSYLTIMTGLMENHRPELM-AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
Y ++ G R ++ AA L + ++ V+ H + S I A KAG + A
Sbjct: 727 PRNSFVYNILIDGWA--RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA 784
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
+T+ M L +PN +TY +LI G+ A L + E+K + K + H L
Sbjct: 785 TQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMK-AVGLKPDKAVY--HCL 841
Query: 589 VDAFL--YALVKGGFFDAVMQVVEKSQEMKVFVD 620
+ + L ++ + + VM + ++ E + VD
Sbjct: 842 LTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVD 875
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 135/321 (42%), Gaps = 10/321 (3%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+P+ + FG + Y +G + E M G + Y+SLI Y ++E A
Sbjct: 307 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEA-- 364
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
L C+ E + S TY +V GF + GN + + EA+++ + ++ S+
Sbjct: 365 --LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKT---LNASIYG 419
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
II A ++A +++ EM G + +Y + Y + + +
Sbjct: 420 KIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKEC 479
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME-NHRPEL 491
G V Y LI A + R M+E + +Y ++ G ++
Sbjct: 480 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 539
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
A F D V E + +V +N+II AFC G ++ A +T++ M L+ P +T++ +I
Sbjct: 540 FAVFEDMVKEGMKPDVIL--YNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 597
Query: 552 NGYVTAEQYFSVLMMWHEIKR 572
NG+ + L ++ ++R
Sbjct: 598 NGFAKSGDMRRSLEVFDMMRR 618
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 182/429 (42%), Gaps = 53/429 (12%)
Query: 233 GLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
G V+D +K V + + G P ++G L LY G K +E+ +M E G
Sbjct: 458 GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Query: 290 QMVFYSSLISGYVKLGNLESA-------------------SRTILLCLGGGNMEQS---- 326
+ YS +I+G+VKL + +A + I G GNM+++
Sbjct: 518 NLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTV 577
Query: 327 --------DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
+ T+ ++ G+ ++G+++ + + G V G+I+
Sbjct: 578 KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF---DMMRRCGCVPTVHTFNGLINGL 634
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
V +KA ILDEM G S Y ++ Y T +A + + + GL +D+
Sbjct: 635 VEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDI 694
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM-AAFLD 497
Y+AL++A S QSA ++ ++M I Y ++ G R ++ AA L
Sbjct: 695 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA--RRGDVWEAADLI 752
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ ++ V+ H + S I A KAG + A +T+ M L +PN +TY +LI G+ A
Sbjct: 753 QQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARA 812
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFE----HNLVDAFL--YALVKGGFFDAVMQVVEK 611
L + E+K GIK + H L+ + L ++ + + VM + ++
Sbjct: 813 SLPEKALSCYEEMK-------AMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKE 865
Query: 612 SQEMKVFVD 620
E + VD
Sbjct: 866 MVEAGLIVD 874
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 128/306 (41%), Gaps = 10/306 (3%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+P+ + FG + Y +G + E M G + Y+SLI Y +++ A
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA-- 363
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
L C+ E + S TY +V GF + G+ + EA+++ + ++ S+
Sbjct: 364 --LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT---LNASIYG 418
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
II A ++A +++ EM G + +Y + Y + + +
Sbjct: 419 KIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKEC 478
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME-NHRPEL 491
G V Y LI A + R M+E + +Y ++ G ++
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
A F D V E + +V +N+II AFC G ++ A +T++ M L+ P +T++ +I
Sbjct: 539 FAVFEDMVKEGMKPDVIL--YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 552 NGYVTA 557
+GY +
Sbjct: 597 HGYAKS 602
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 158/354 (44%), Gaps = 43/354 (12%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIE---TMSVLGVRPNESSFGFLAYLYALKGLQEK 274
P++ + ++G C+ V + +KV++ M + G++PN ++ + L G K
Sbjct: 143 PDVVSYTTIIDGYCH----VGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSG---K 195
Query: 275 IVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
+VE E ++ E G V Y++LI G+ KLGN ++A + ME + +
Sbjct: 196 VVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLF------SEMEAREIVPD 249
Query: 332 T--YCEVVKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLSD 385
+ + ++ G +G V +EA KL G D +I LG
Sbjct: 250 SIAFSALICGLSGSGKV-------VEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMK 302
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
KA + ++M G + + Y CK A +L+ ++ GLQL++ Y+ ++
Sbjct: 303 KAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIV 362
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM-----TGLMENHRPELMAAFLDEVV 500
+ + A L +M+EA ++ +Y T+M TG M R EL+ LD +
Sbjct: 363 NGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAR-ELLREMLDRGL 421
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ V +N +++ C +G+LED +R L+ M+ PN TY S++ Y
Sbjct: 422 QPTVV-----TFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQY 470
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 134/315 (42%), Gaps = 11/315 (3%)
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
++ E+Y ++ + G ++ +L++ ++E G + D II ++G K
Sbjct: 108 WNTESYNILMNSLFRLGKIREAHHLLM---RMEFKGCIPDVVSYTTIIDGYCHVGELQKV 164
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
++ EM G L Y + CK + E +++ ++ G+ D Y LI+
Sbjct: 165 VQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDG 224
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ Q+A+ LF +M I ++ ++ GL + + +E+++ E
Sbjct: 225 FCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKG-FEP 283
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+ ++I +CK G ++ A +M+ + PN TY +L +G + + + +
Sbjct: 284 DEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELL 343
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQA 627
HE+ R KG++ + + + L K G ++++E+ +E + D Y
Sbjct: 344 HEMCR-------KGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTL 396
Query: 628 FMENHKKLKVAKLRK 642
+K ++ K R+
Sbjct: 397 MDAYYKTGEMVKARE 411
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 163/453 (35%), Gaps = 68/453 (15%)
Query: 28 PSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNI--TSLETNLHKSLLTNNTD 85
P+LY++ SI L KS + ++ ++ + D++ T+L K NT
Sbjct: 178 PNLYTY--SSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCK---LGNTQ 232
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTV 145
A+K F + A + P ++LI LS + F ++ K D T
Sbjct: 233 AAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI----KKGFEPDEVTY 288
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECC 205
L+ AF L M + P + L D K+ ++ E C
Sbjct: 289 TALIDGYCKLGEMKKAFFLHNQMVQIG-LTPNVVTYTALADGLCKSGELDTANELLHEMC 347
Query: 206 RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
R L + NI N + G C ++ A K++E M G+ P+ ++ L
Sbjct: 348 RKGL-------QLNISTYNTIVNGLCKA-GNILQAVKLMEEMKEAGLHPDTITYTTLMDA 399
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
Y G K EL M + G +V ++ L++G G LE R + L G M
Sbjct: 400 YYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPN 459
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
+ TY ++K + N++ IS + G+
Sbjct: 460 A----ATYNSIMKQYCIRNNMR---------------------------ISTEIYRGMC- 487
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
A ++ + N Y +K +CK EA L ++ L +Y+ALI
Sbjct: 488 -AQGVVPDSNT---------YNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALI 537
Query: 446 EASITSQDFQSAFSLFRDMRE------ARIYDL 472
+ + A LF +MR A IY+L
Sbjct: 538 KGFFKRKKLLEARQLFEEMRREGLVASAEIYNL 570
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 169/406 (41%), Gaps = 53/406 (13%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+PNE + + L +GL EK E+ M G + Y++LI+ Y + G E +
Sbjct: 139 KPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVS-- 196
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNG-NVKGLANLIIEAQKLEPSGIVVDRSVG 371
L L E+ S TY V+ + G N +GL +L E + GI D
Sbjct: 197 --LELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAE---MRHEGIQPDIITY 251
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
+++AC N GL D+A + MN G + Y ++ + K ++ + ++L+ ++ S
Sbjct: 252 NTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMES 311
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR-------------IYDLKGSYLT 478
SG D+ +Y+ L+EA + D + A +FR M+EAR +Y G Y
Sbjct: 312 SGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDD 371
Query: 479 IMTGLME----NHRP-------------------ELMAAFLDEVVEDPRVEVKTHDWNSI 515
+ +E N P E++ F D V E+ VE + +
Sbjct: 372 VRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEEN--VEPNMGTYEGL 429
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I+A K G EDAK+ L M P+ + Y +I Y A Y L+M++
Sbjct: 430 IYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFN------- 482
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
T + G K ++ + +GG + ++ K E V D+
Sbjct: 483 TMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDR 528
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 148/397 (37%), Gaps = 62/397 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I N + C G + + M G++P+ ++ L A +GL ++
Sbjct: 210 PSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEM 269
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ MNE G + Y +L+ + KL LE S +
Sbjct: 270 VFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELL----------------------- 306
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+++E SG + D S ++ A + G A + +M
Sbjct: 307 -------------------KEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEA 347
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
C Y L Y R + +L +++ S + DVG Y+ LIE F+
Sbjct: 348 RCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEV 407
Query: 458 FSLFRDMREARIYDLKGSYLTIM-----TGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+LF DM E + G+Y ++ GL E+ + L+ +DE P T +
Sbjct: 408 VTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILL--HMDEKGIVP----STKAY 461
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF-SVLMMWHEIK 571
+I A+ +A E+A M + +P +TY SLIN + Y S +MW
Sbjct: 462 TGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKM-- 519
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQV 608
G+ G+ + + + + +GG F+ ++
Sbjct: 520 ------GESGVARDRDSFNGVIEGYRQGGQFEEAIKT 550
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 158/409 (38%), Gaps = 85/409 (20%)
Query: 184 LVDIC-RKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCC-YGLQSVSDAE 241
+++ C R N+ L +F E + ++P+I N L C GL +AE
Sbjct: 218 VINSCARGGLNWEGLLSLFAEMRH-------EGIQPDIITYNTLLNACANRGLGD--EAE 268
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
V TM+ G+ P+ +++ L + EK+ EL M G + Y+ L+ Y
Sbjct: 269 MVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAY 328
Query: 302 VKLGNLESA-----------------SRTILLCLGGGNMEQSDFSK-------------- 330
G++ A + ++LL L GG+ D +
Sbjct: 329 ASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDV 388
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY +++ F + G K + L + + +EP+ + G+I AC GL + A
Sbjct: 389 GTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYE-----GLIYACGKGGLHEDAK 443
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
IL M+ G Y ++AY + EA + ++ G + V Y++LI
Sbjct: 444 KILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMF 503
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
++ + ++ M E+ + + S+
Sbjct: 504 ARGGLYKESEAIMWKMGESGVARDRDSF-------------------------------- 531
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
N +I + + G+ E+A +T + +F+P+++T+ ++++ Y TA
Sbjct: 532 ----NGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTA 576
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 98/517 (18%), Positives = 191/517 (36%), Gaps = 36/517 (6%)
Query: 27 TPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDE 86
TPS+ ++ I S R L + S + + + + Q +I + T L+ DE
Sbjct: 209 TPSILTY-NTVINSCARGGLNWEGLLSLFAEMRHEGI-QPDIITYNTLLNACANRGLGDE 266
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVH 146
A F+++ + P +L+ L N + ++ +E + L D + +
Sbjct: 267 AEMVFRTMNEGGMVPDITTYRNLVETFGKL----NKLEKVSELLKEMESSGNLPDISSYN 322
Query: 147 TLLGSMRNANTAAPAFALVKCMFKNR-------YFMPFELWGGFLVDICRKNSNFVAFLK 199
LL + + A + + M + R Y M L+GG
Sbjct: 323 VLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGH---------------G 367
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
+++ + L+ + +P++ N +E G + + M V PN ++
Sbjct: 368 RYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEG-GYFKEVVTLFHDMVEENVEPNMGTY 426
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
L Y GL E ++ M+E G Y+ +I Y + + E A L+
Sbjct: 427 EGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEA----LVMFN 482
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
N S + ETY ++ F + G K ++ K+ SG+ DR G+I
Sbjct: 483 TMNEMGSKPTVETYNSLINMFARGGLYKESEAIM---WKMGESGVARDRDSFNGVIEGYR 539
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
G ++A E+ + L YC E+ + +I +SG+ V
Sbjct: 540 QGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVM 599
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y +I S + A+ + +M ++ ++ +M G +++ M ++ +
Sbjct: 600 CYCMMIAVYARSNRWDDAYEVLDEMVTNKVSNIHQVVGKMMKGDYDDYSNWQMVEYVFDK 659
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+ + +N+++ A G+ E A R L I
Sbjct: 660 LNSEGCGLGMRFYNTLLEALWWLGQKERAARVLSEAI 696
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 155/340 (45%), Gaps = 13/340 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ N ++ C Q V A ++E MS GV P+E++F L + +G +
Sbjct: 181 IKPDVVTFNTLMKALCRAHQ-VRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAA 239
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ +++ M E G S V + LI+GY KLG +E A I + G + + TY
Sbjct: 240 LRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANG----FEPDQITYNT 295
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV-GFGIISACV-NLGLSDKAHSILDE 393
V G QNG+V G A +++ E D V + I+ C+ G ++A IL++
Sbjct: 296 FVNGLCQNGHV-GHALKVMDVMVQEGH----DPDVFTYNIVVNCLCKNGQLEEAKGILNQ 350
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M GC + + + A C +R EA L ++ GL DV ++ LI A D
Sbjct: 351 MVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGD 410
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
Q A LF +M+ + + +Y T++ L + L E +E T +N
Sbjct: 411 PQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKE-MESAGCPRSTVTYN 469
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+II CK R+E+A+ +M N T+ +LI+G
Sbjct: 470 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 509
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 87/440 (19%), Positives = 163/440 (37%), Gaps = 66/440 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P N + G C L V DA I+ G P++ ++ G ++
Sbjct: 253 PTKVTVNVLINGYCK-LGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALK 311
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS------------------RTILLCLG 319
+ +M + G + Y+ +++ K G LE A T+++ L
Sbjct: 312 VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALC 371
Query: 320 GGNM--EQSDFSKETYCEVVKGFLQNGNVKGLA------NLIIEA--------------Q 357
GN E D +++ +KGL+ N++I A +
Sbjct: 372 SGNRLEEALDLARQV------------TLKGLSPDVYTFNILINALCKVGDPQLALRLFE 419
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+++ SG D +I +LG KA +L EM + GC Y + CK+
Sbjct: 420 EMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKM 479
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
R EA ++ + G+ + ++ LI+ + A L M + +Y
Sbjct: 480 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYN 539
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
+I+T + + A L + + EV + ++I+ CKAGR + A + LR M
Sbjct: 540 SILTHYCKQGDIKKAADILQTMTANG-FEVDVVTYGTLINGLCKAGRTQVALKLLRGMRI 598
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALV 597
+ Y +I + ++ R+++ G+ F + +V L
Sbjct: 599 KGMRATPKAYNPVIQSLFRRNNTRDAMNLF----REMTEVGEPPDAFTYKIV---FRGLC 651
Query: 598 KGG-----FFDAVMQVVEKS 612
+GG FD ++++V+K
Sbjct: 652 RGGGSIREAFDFLLEMVDKG 671
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 69/166 (41%), Gaps = 36/166 (21%)
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
++ EM G + + +KA C+ H+ A ++ ++SSSG+ D + L++
Sbjct: 170 ETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQG 229
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ ++A + +AR+ ++ S +
Sbjct: 230 FVEEGSIKAALRV-----KARMLEMGCSPTKVTV-------------------------- 258
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
N +I+ +CK GR+EDA +++ I FEP+ TY + +NG
Sbjct: 259 -----NVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNG 299
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 3/172 (1%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS--GLQLDVGNYD 442
D ++ EM G V +GV L++Y ++ +A LV++ G+Q D Y+
Sbjct: 95 DLMKVLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYN 154
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
L+ + + +++ +M E I ++ T+M L H+ L+E+
Sbjct: 155 HLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM-SS 213
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
V + +++ F + G ++ A R RM+ + P T LINGY
Sbjct: 214 SGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGY 265
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 167/374 (44%), Gaps = 44/374 (11%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++ ++ N ++ C Q V A ++E M G+ P+E++F + Y G +
Sbjct: 199 IRHDVSTFNILIKALCKAHQ-VRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGA 257
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ ++ M E+G V + LI+G+ K G ++ A I + G F TY
Sbjct: 258 LRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEG-FRPDQF---TYNT 313
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+V G + G+ K A +++A L G+ D +IS LG ++A ILD+M
Sbjct: 314 LVNGLCKIGHAKH-AMEVVDAMLL--GGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMV 370
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ CS Y + + CKE+R EAT++ ++S G+ DV +++LI+ S + +
Sbjct: 371 SRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHK 430
Query: 456 SAFSLFRDMR-------------------------EA----RIYDLKGS------YLTIM 480
SA LF +M+ EA + +L G Y T++
Sbjct: 431 SAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLI 490
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
G +N R E DE +E V + +N++I CK+ R+EDA + + +MI
Sbjct: 491 DGFCKNKRIEEAEEIFDE-MELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGL 549
Query: 541 EPNDQTYLSLINGY 554
P+ TY SL+ +
Sbjct: 550 RPDKFTYNSLLTHF 563
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 14/250 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA-YLYALKGLQEKIV 276
P++ N+ ++G C S A + E M G RP+E ++ L L + + L+E +
Sbjct: 411 PDVCTFNSLIQGLCLSSNHKS-AMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALN 469
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
L+ M G + +V Y++LI G+ K +E A ME S++ TY
Sbjct: 470 LLKE-MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIF------DEMELQGVSRDSVTYN 522
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G ++ V+ A L+ ++ G+ D+ +++ G KA I+ M
Sbjct: 523 TLIDGLCKSKRVEDAAQLM---DQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTM 579
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ GC+ + Y + CK R A++L+ I G+ L Y+ +I+A
Sbjct: 580 TSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRT 639
Query: 455 QSAFSLFRDM 464
A LFR+M
Sbjct: 640 HEAMRLFREM 649
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 147/363 (40%), Gaps = 54/363 (14%)
Query: 204 CCRIALDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
C + +D+ L F+ +P+ + N + G C + A +V++ M + G+ P+
Sbjct: 284 CKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLC-KIGHAKHAMEVVDAMLLGGLDPD 342
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
++ L G E+ V++ M S V Y+++IS K ++ A+
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402
Query: 316 LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR-SVGFGI 374
L G + T+ +++G + N K +L ++++ G D + I
Sbjct: 403 LLTSKGILPDVC----TFNSLIQGLCLSSNHKSAMDLF---EEMKGKGCRPDEFTYNMLI 455
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
S C + L ++A ++L EM GC+ + +Y + +CK R EA ++ ++ G+
Sbjct: 456 DSLCSSRKL-EEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGV 514
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
D Y+ LI+ S+ + A L M +ME RP+
Sbjct: 515 SRDSVTYNTLIDGLCKSKRVEDAAQLMDQM------------------IMEGLRPDKFT- 555
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+NS++ FCK G ++ A ++ M P+ TY +LI+G
Sbjct: 556 -----------------YNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGL 598
Query: 555 VTA 557
A
Sbjct: 599 CKA 601
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 13/233 (5%)
Query: 82 NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLD 141
N DEA + + LT+ + P NSLI L L NH K A + K + +
Sbjct: 392 NRVDEATEIARLLTSKGILPDVCTFNSLIQGLC-LSSNH--KSAMDLFEEMKGKGCRPDE 448
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
F T + L+ S+ ++ A L+K M N ++ + C+ K
Sbjct: 449 F-TYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKN--------KRI 499
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
EE I + L + + N ++G C + V DA ++++ M + G+RP++ ++
Sbjct: 500 EEAEEIFDEMELQGVSRDSVTYNTLIDGLCKS-KRVEDAAQLMDQMIMEGLRPDKFTYNS 558
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
L + G +K ++ M G + +V Y++LISG K G ++ ASR +
Sbjct: 559 LLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLL 611
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 128/369 (34%), Gaps = 71/369 (19%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+IY N+ + G C L + +A K+++ M PN ++ + + ++
Sbjct: 339 LDPDIYTYNSLISGLC-KLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEA 397
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG--------NM---- 323
E+ L+ G + ++SLI G N +SA G G NM
Sbjct: 398 TEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDS 457
Query: 324 --------EQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
E + KE Y ++ GF +N ++ + E +E G+
Sbjct: 458 LCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDE---MELQGV 514
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
D +I + A ++D+M G Y L +CK +A
Sbjct: 515 SRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAAD 574
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
+V ++SSG D+ Y LI + Q A L R ++ +KG LT
Sbjct: 575 IVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQ------MKGMVLT------ 622
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
H +N +I A K R +A R R M+ P+
Sbjct: 623 ------------------------PHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDA 658
Query: 545 QTYLSLING 553
TY + G
Sbjct: 659 ITYKIVYRG 667
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 176/430 (40%), Gaps = 31/430 (7%)
Query: 131 YVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICR- 189
Y +++ L +T ++LL N A+ L MF+ R + + +C+
Sbjct: 175 YTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKE 234
Query: 190 ----KNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIE 245
K +FV ++ +KPNI N + G C + V A+ ++
Sbjct: 235 GKLKKAKDFVGHMET-------------SGVKPNIVTYNTIVHGYCSSGR-VEAADAILT 280
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
TM + P+ ++G L +G E+ ++ M + G V Y++LI G+ G
Sbjct: 281 TMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV 365
NL+ AS L G + TY ++ +I E Q+ GI
Sbjct: 341 NLDMASAYKDEMLKKG----ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE---KGIS 393
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
D +I+ + KA + DEM A G Y L K++R EA L
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
I+S G+ DV ++ALI+ ++ + + AF L +DM ++ + ++ TIM G
Sbjct: 454 FKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+ E DE+ R +K +N++I + + G ++DA R M+ F P
Sbjct: 514 EGKVEEARELFDEM---KRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570
Query: 544 DQTYLSLING 553
TY +L+ G
Sbjct: 571 VLTYNALVQG 580
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ CKE + +A V + +SG++ ++ Y+ ++ +S ++A ++ M+ +I
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLE 526
+Y ++++G+ + R E + +E+V+ P + +N++I FC G L+
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVI----YNTLIDGFCNKGNLD 343
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK-ISTDG 578
A M+ P TY SLI+ ++ M EI+ K IS D
Sbjct: 344 MASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 117/297 (39%), Gaps = 29/297 (9%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I+ G KA + M G + Y + YC R A ++ +
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ D Y +LI + A +F +M + + Y T++ G ++ +
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A+ DE+++ + +NS+IHA R ++A+ ++ + P+ TY LING
Sbjct: 347 AYKDEMLKK-GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405
Query: 554 YV----------------------TAEQYFSVLMMWHEIKR-KISTDGQKGIKFEHNLVD 590
Y T + Y S+L + + R K + D K I E L D
Sbjct: 406 YCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPD 465
Query: 591 AFLY-ALVKGGFFDA----VMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRK 642
++ AL+ G ++ ++++ MKV D+ + + ++ KV + R+
Sbjct: 466 VIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 143/348 (41%), Gaps = 55/348 (15%)
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEG-CCYGLQSVS 238
+G + +C K K+FEE + L +P+ N ++G C G ++
Sbjct: 294 YGSLISGMC-KQGRLEEASKIFEEMVQKGL-------RPSAVIYNTLIDGFCNKGNLDMA 345
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYS 295
A K + M G+ P S++ L ++AL ++++ E E ++ E G S + Y+
Sbjct: 346 SAYK--DEMLKKGISPTMSTYNSL--IHAL-FMEQRTDEAECMIKEIQEKGISPDAITYN 400
Query: 296 SLISGYVKLGNLESA------------------SRTILLCLGGGN-MEQSD--FSKET-- 332
LI+GY + N + A ++L L N M+++D F K T
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460
Query: 333 --------YCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ ++ G N NVKG L+ ++ K+ P + + I+ G
Sbjct: 461 GVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNT-----IMQGHCREG 515
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
++A + DEM G + + Y + +A ++ ++ +G V Y+
Sbjct: 516 KVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYN 575
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
AL++ +Q+ A L ++M + +Y T++ G+ + + P+
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPD 623
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 8/251 (3%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I +C ++ +D+A M G + L + K +RT A L ++
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ V ++ +I + A M + + +Y TI+ G + R E
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A L ++ ++E + + S+I CK GRLE+A + M+ P+ Y +LI+G
Sbjct: 277 AIL-TTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDG 335
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
+ L M K ++ +KGI + ++ ++AL D ++++ Q
Sbjct: 336 FCNKGN----LDMASAYKDEML---KKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQ 388
Query: 614 EMKVFVDKWKY 624
E + D Y
Sbjct: 389 EKGISPDAITY 399
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
+D LI++ AF F M+E + + ++++ ++ +R E E+
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
R++ + +N +I+ CK G+L+ AK + M +PN TY ++++GY ++ +
Sbjct: 214 R-LRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272
Query: 561 FSVLMMWHEIKR-KISTD 577
+ + +KR KI D
Sbjct: 273 EAADAILTTMKRQKIEPD 290
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 17/231 (7%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIE 134
+H + TDEA K + + P N LI N K+AF ++
Sbjct: 368 IHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCA---NAKKAFLLHDEMLA 424
Query: 135 KNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNF 194
K +T +LL + N A L K + +P + L+D NSN
Sbjct: 425 SGIKPTK-KTYTSLLHVLSKKNRMKEADDLFK-KITSEGVLPDVIMFNALIDGHCSNSNV 482
Query: 195 VAFLKVFEECCRIALDENLDFMK--PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
FE L +++D MK P+ N ++G C V +A ++ + M G+
Sbjct: 483 KG---AFE------LLKDMDRMKVPPDEVTFNTIMQGHCRE-GKVEEARELFDEMKRRGI 532
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+P+ SF L Y+ +G + + + M + GF+ ++ Y++L+ G K
Sbjct: 533 KPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCK 583
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 129/574 (22%), Positives = 227/574 (39%), Gaps = 77/574 (13%)
Query: 13 RKKFFCSSSSTSPETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLE 72
R++ S +SP TP QP +F L ++ Q P + + L D+ +
Sbjct: 70 RREIVSSLLGSSP-TP------QPRVFDLLIRTYTQS--RKPREAFEAFRLILDHRVPIP 120
Query: 73 TNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFA----- 127
+LL + W + +F S N+ ++ HN +A
Sbjct: 121 AAASNALLAALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMV----HNYCKALEFDKVD 176
Query: 128 SVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDI 187
+V+ +EK D T + ++ + A A A ALV M + L +
Sbjct: 177 AVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGL 236
Query: 188 CRKNSNFVAFLKVFEECCRIALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIET 246
CR A+ +VF+E +D DF + P++ + + G C + + +A K+ +
Sbjct: 237 CRSGMWDKAW-EVFKE-----MD---DFGVAPDVRSFTILIGGFCR-VGEIEEALKIYKE 286
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
M G++P+ SF L L+A +G + + M FG V Y+ +I G+ + G
Sbjct: 287 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 346
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
+ A R +G G + V L NG K E + L+ G+
Sbjct: 347 MSDALRVRDEMVGCGCLPDV---------VTYNTLLNGLCK-------ERRLLDAEGL-- 388
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
L+EM G L + + YC E + +A QL
Sbjct: 389 ------------------------LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 424
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ + L+ D+ Y+ LI+ D A L+ DM I+ +Y ++ E
Sbjct: 425 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 484
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ E FLDE++ + + +NSII +C++G + ++ L++M+ + P+ T
Sbjct: 485 GQVEDAFGFLDEMI-NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLIT 543
Query: 547 YLSLINGYVTAEQY---FSVLMMWHEIKRKISTD 577
Y +LI+GY+ ++ F +L M K K+ D
Sbjct: 544 YNTLIHGYIKEDKMHDAFKLLNMME--KEKVQPD 575
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 146/340 (42%), Gaps = 17/340 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N + C L+ + +A K++ +M + G+ PN ++ + G E+
Sbjct: 236 PNVVTYNTVIGAYC-KLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSG 294
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ + M+ GF+ V Y++L++GY K+GN A L L M ++ + TY
Sbjct: 295 VLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQA-----LVLHS-EMLRNGLPPDVVTYTS 348
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ + GN+ + + L P+G+ +I+ G D+A+ I DE
Sbjct: 349 LINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYT-----SLINGFSQKGFMDEAYRIWDE 403
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G + Y L +C R EA L+ + GL DV +Y +I Q+
Sbjct: 404 MIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQE 463
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
AF + +M E + +Y +++ GL E R E++ + +
Sbjct: 464 LDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLP-DEFTYT 522
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
S+I+ +CK G L +A MI F P+ TY LING
Sbjct: 523 SLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLING 562
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 14/206 (6%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE-ATQLVMDISSS 432
++ +C L +KA +I+D G G+ Y L + + + A ++ ++ +S
Sbjct: 138 VVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIAS 197
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G+ L+V +Y+ LI + + + F +M R +Y T++ + R
Sbjct: 198 GVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKR---- 253
Query: 493 AAFLDEVVEDPR------VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+DE + R +E +N +I+ C+ GR+E+ L M F P+ T
Sbjct: 254 ---IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVT 310
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKR 572
Y +L+NGY + L++ E+ R
Sbjct: 311 YNTLVNGYCKVGNFHQALVLHSEMLR 336
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 7/184 (3%)
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+EM C + Y + AYCK R EA +L+ + GL+ ++ Y+ +I
Sbjct: 227 EEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRV 286
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVK 508
+ + +M +Y T++ G + E++ + P V
Sbjct: 287 GRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVT- 345
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+ S+I+ CKAG L A +M PN TY SLING+ +W
Sbjct: 346 ---YTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWD 402
Query: 569 EIKR 572
E+ R
Sbjct: 403 EMIR 406
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 124/522 (23%), Positives = 221/522 (42%), Gaps = 60/522 (11%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL--LDFQT 144
A ++F+S+ A + PS V +SLI + +D ++ A V + E+ ++ + +
Sbjct: 303 ARQTFESMRARGIEPSSHVYSSLIHAYAVGRD---MEEALHCVRKMKEEGIEMTIVTYSI 359
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
+ M NA+ A F K + + ++GG + C+ + + E
Sbjct: 360 IVGGFAKMGNADAADHWFEEAKEKLPS---LNAVIYGGIIYAHCQ-----ICNMDRAEAL 411
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEK---VIETMSVLGVRPNESSFGF 261
R ++ +D +IY + ++G Y + + + EK V + + G P+ S+G
Sbjct: 412 VREMEEQGID-APIDIY--HTMMDG--YTM--IGNEEKCLIVFDRLKECGFFPSVISYGC 464
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA----------- 310
L LY G K +E+ +M G M YS LI+G++KL + +A
Sbjct: 465 LINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDG 524
Query: 311 --------SRTILLCLGGGNMEQS-----DFSKE-------TYCEVVKGFLQNGNVKGLA 350
+ I G GNM+++ KE T+ ++ GF + G ++
Sbjct: 525 LKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRAL 584
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
+ + SG + +I V KA +ILDEMN G Y +
Sbjct: 585 EIF---DMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLM 641
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
+ Y T +A Q + + GL++DV Y+AL+++ S QSA ++ ++M I
Sbjct: 642 QGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIP 701
Query: 471 DLKGSYLTIMTGLMENHRPELM-AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
Y ++ G R ++ AA L + + + H + S I+A CKAG ++ A
Sbjct: 702 RNTFVYNILIDGWAR--RGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKAT 759
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
++ M +PN +TY +LING+ A L + E+K
Sbjct: 760 EIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMK 801
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 142/342 (41%), Gaps = 44/342 (12%)
Query: 232 YGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
YG + + A + E+M G+ P+ + L + YA+ E+ + M E G
Sbjct: 294 YGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMT 353
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
+V YS ++ G+ K+GN ++A + + Y ++ Q N+
Sbjct: 354 IVTYSIIVGGFAKMGNADAADH----WFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAE 409
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
L+ E +E GI + ++ +G +K + D + CG + Y +
Sbjct: 410 ALVRE---MEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLI 466
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
Y K + ++A ++ + SG++ ++ Y LI + +D+ +AFS+F D +
Sbjct: 467 NLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTK---- 522
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
GL +P+++ +N+II AFC G ++ A
Sbjct: 523 ----------DGL----KPDVVL------------------YNNIITAFCGMGNMDRAIC 550
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+R+M + P +T+L +I+G+ A + L ++ ++R
Sbjct: 551 MVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRR 592
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 156/378 (41%), Gaps = 18/378 (4%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AE ++ M G+ + + Y + G +EK + + + E GF ++ Y LI+
Sbjct: 408 AEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLIN 467
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
Y K+G + A + M + +TY ++ GFL+ +K AN +
Sbjct: 468 LYTKVGKVSKALEISKMM----KMSGIKHNMKTYSMLINGFLK---LKDWANAFSVFEDF 520
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
G+ D + II+A +G D+A ++ +M ++P + + +
Sbjct: 521 TKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEM 580
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A ++ + SG V Y+ALI + + A ++ +M A + + +Y T+
Sbjct: 581 RRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTL 640
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
M G E + V+ + +E+ + + +++ + CK+GR++ A + M
Sbjct: 641 MQGYASLGDTEKAFQYFT-VLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKN 699
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKG 599
N Y LI+G+ + + ++++ +G+ + + +F+ A K
Sbjct: 700 IPRNTFVYNILIDGWARRGDVWEAADLMQQMRK-------EGLLPDIHTYTSFINACCKA 752
Query: 600 GFFDAVMQVVEKSQEMKV 617
G +++ QEM+
Sbjct: 753 GDMQKATEII---QEMEA 767
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 119/279 (42%), Gaps = 48/279 (17%)
Query: 211 ENLDFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
E D M+ P ++ NA + G Q ++ A +++ M+V GV PNE ++ L
Sbjct: 585 EIFDMMRRSGCIPTVHTYNALILGLVEKRQ-MTKAVAILDEMNVAGVGPNEHTYTTLMQG 643
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
YA G EK + +++ G + Y +L+ K G ++SA + + N+ +
Sbjct: 644 YASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSA-LAVTKEMSAKNIPR 702
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
+ F Y ++ G+ + G+V A+L+ Q++ G++ D
Sbjct: 703 NTF---VYNILIDGWARRGDVWEAADLM---QQMRKEGLLPD------------------ 738
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
H+ +NAC CK +AT+++ ++ +SG++ ++ Y LI
Sbjct: 739 -IHTYTSFINAC----------------CKAGDMQKATEIIQEMEASGIKPNLKTYTTLI 781
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
+ + A S F +M+ A K Y ++T L+
Sbjct: 782 NGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLL 820
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 129/574 (22%), Positives = 227/574 (39%), Gaps = 77/574 (13%)
Query: 13 RKKFFCSSSSTSPETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLE 72
R++ S +SP TP QP +F L ++ Q P + + L D+ +
Sbjct: 9 RREIVSSLLGSSP-TP------QPRVFDLLIRTYTQS--RKPREAFEAFRLILDHRVPIP 59
Query: 73 TNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFA----- 127
+LL + W + +F S N+ ++ HN +A
Sbjct: 60 AAASNALLAALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMV----HNYCKALEFDKVD 115
Query: 128 SVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDI 187
+V+ +EK D T + ++ + A A A ALV M + L +
Sbjct: 116 AVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGL 175
Query: 188 CRKNSNFVAFLKVFEECCRIALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIET 246
CR A+ +VF+E +D DF + P++ + + G C + + +A K+ +
Sbjct: 176 CRSGMWDKAW-EVFKE-----MD---DFGVAPDVRSFTILIGGFCR-VGEIEEALKIYKE 225
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
M G++P+ SF L L+A +G + + M FG V Y+ +I G+ + G
Sbjct: 226 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 285
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
+ A R +G G + V L NG K E + L+ G+
Sbjct: 286 MSDALRVRDEMVGCGCLPDV---------VTYNTLLNGLCK-------ERRLLDAEGL-- 327
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
L+EM G L + + YC E + +A QL
Sbjct: 328 ------------------------LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 363
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ + L+ D+ Y+ LI+ D A L+ DM I+ +Y ++ E
Sbjct: 364 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 423
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ E FLDE++ + + +NSII +C++G + ++ L++M+ + P+ T
Sbjct: 424 GQVEDAFGFLDEMI-NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLIT 482
Query: 547 YLSLINGYVTAEQY---FSVLMMWHEIKRKISTD 577
Y +LI+GY+ ++ F +L M K K+ D
Sbjct: 483 YNTLIHGYIKEDKMHDAFKLLNMME--KEKVQPD 514
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 196/464 (42%), Gaps = 32/464 (6%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T TL+ + ++ AF L++ M + G ++ +C + +E+
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD--------MGCYED 338
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSF-GF 261
R+ +D +PN+Y A + G C GL V A + MS GV PN ++
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKV--AIGLFHRMSRDGVFPNTVTYNAL 396
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+ L + ++ V L +LM G S +V Y+ +I GY LG+ + A +
Sbjct: 397 INILVENRRIKYAFVVL-NLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM------N 449
Query: 322 NMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
NM Q S TY ++KG+ +GN ++ + G D +I
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL---DLMRDGGCKPDEWSYTELICGFC 506
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
+ + A + +EM G Y + YCK+ + AT L+ + SG + +V
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y+ LI +F A L + M E I+ +Y ++ GL +N L +++
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA-- 557
+E + ++S+I A + G++E+A+ + P++ TY+ +I Y+ +
Sbjct: 627 IEQGCLP-NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685
Query: 558 -EQYFSVL--MMWHEIKRKISTDGQ--KGIKFEHNLVDAFLYAL 596
E F+ L M+ + + T G KG+K E+ L D L AL
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAAL 729
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 144/368 (39%), Gaps = 41/368 (11%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PN A ++G C + + A ++E M G RPN ++ L + +
Sbjct: 524 DGLCPNEVTYTALIDGYCKD-EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-T 332
EL +M E G +V Y+++I G K G S ++ L + +EQ T
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG-----STSLALEMFNKMIEQGCLPNLLT 637
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y +++ Q G V+ NL E LE G++ D +I A + G + A + L
Sbjct: 638 YSSLIRALGQEGKVEEAENLFAE---LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEH-----RTAEATQLVMDIS----------------- 430
M GC L Y +K E+ R A +V + S
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAK 754
Query: 431 ----SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
GL + V N AL+ T+ + A L M + + +Y +++ L+
Sbjct: 755 LAELDPGLSVQVQN--ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRV 812
Query: 487 HRPEL-MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+L M F + EV + + +I A C+ R ++A+ T M+ + P+D
Sbjct: 813 RNVDLAMGVFKHMSTQG--CEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDV 870
Query: 546 TYLSLING 553
LI+G
Sbjct: 871 VQAVLIDG 878
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 5/188 (2%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+ H +L E G L +Y + A CK+ A+A ++ + S + D Y ++
Sbjct: 201 DRYHRMLSE----GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSM 256
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I D SA +F M + +Y T++ GL ++ R + E++
Sbjct: 257 ILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG- 315
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+ H I A C G EDA R M EPN TY +LI+G + +
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 375
Query: 565 MMWHEIKR 572
++H + R
Sbjct: 376 GLFHRMSR 383
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 137/339 (40%), Gaps = 18/339 (5%)
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
C+ ++++ ++ +S G+R ++ L + G+ +++ M G
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
++ Y+++I+ K GN+ A TI+ + M F TY ++ G + ++
Sbjct: 215 LLIYNAVINALCKDGNVADA-ETIMKKVFESEMSPDTF---TYTSMILGHCRKHDLDSAL 270
Query: 351 NLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
+ + K EP+ + +I+ + G ++A ++ EM G
Sbjct: 271 QVFNQMAKEGCEPNTVTYST-----LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ A C +A +L +D+ + G + +V Y ALI S + A LF M
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRL 525
++ +Y ++ L+EN R + L+ + + P + +N +I +C G
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVT----YNEMIKGYCILGDP 441
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+ A + M+ N TY ++I GY + S L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 37/62 (59%)
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N++I+A CK G + DA+ ++++ + P+ TY S+I G+ S L +++++
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277
Query: 572 RK 573
++
Sbjct: 278 KE 279
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 196/464 (42%), Gaps = 32/464 (6%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T TL+ + ++ AF L++ M + G ++ +C + +E+
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD--------MGCYED 338
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSF-GF 261
R+ +D +PN+Y A + G C GL V A + MS GV PN ++
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKV--AIGLFHRMSRDGVFPNTVTYNAL 396
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+ L + ++ V L +LM G S +V Y+ +I GY LG+ + A +
Sbjct: 397 INILVENRRIKYAFVVL-NLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM------N 449
Query: 322 NMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
NM Q S TY ++KG+ +GN ++ + G D +I
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL---DLMRDGGCKPDEWSYTELICGFC 506
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
+ + A + +EM G Y + YCK+ + AT L+ + SG + +V
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y+ LI +F A L + M E I+ +Y ++ GL +N L +++
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA-- 557
+E + ++S+I A + G++E+A+ + P++ TY+ +I Y+ +
Sbjct: 627 IEQGCLP-NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685
Query: 558 -EQYFSVL--MMWHEIKRKISTDGQ--KGIKFEHNLVDAFLYAL 596
E F+ L M+ + + T G KG+K E+ L D L AL
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAAL 729
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 144/368 (39%), Gaps = 41/368 (11%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PN A ++G C + + A ++E M G RPN ++ L + +
Sbjct: 524 DGLCPNEVTYTALIDGYCKD-EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-T 332
EL +M E G +V Y+++I G K G S ++ L + +EQ T
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG-----STSLALEMFNKMIEQGCLPNLLT 637
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y +++ Q G V+ NL E LE G++ D +I A + G + A + L
Sbjct: 638 YSSLIRALGQEGKVEEAENLFAE---LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEH-----RTAEATQLVMDIS----------------- 430
M GC L Y +K E+ R A +V + S
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAK 754
Query: 431 ----SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
GL + V N AL+ T+ + A L M + + +Y +++ L+
Sbjct: 755 LAELDPGLSVQVQN--ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRV 812
Query: 487 HRPEL-MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+L M F + EV + + +I A C+ R ++A+ T M+ + P+D
Sbjct: 813 RNVDLAMGVFKHMSTQG--CEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDV 870
Query: 546 TYLSLING 553
LI+G
Sbjct: 871 VQAVLIDG 878
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 5/188 (2%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+ H +L E G L +Y + A CK+ A+A ++ + S + D Y ++
Sbjct: 201 DRYHRMLSE----GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSM 256
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I D SA +F M + +Y T++ GL ++ R + E++
Sbjct: 257 ILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH-G 315
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+ H I A C G EDA R M EPN TY +LI+G + +
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 375
Query: 565 MMWHEIKR 572
++H + R
Sbjct: 376 GLFHRMSR 383
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 137/339 (40%), Gaps = 18/339 (5%)
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
C+ ++++ ++ +S G+R ++ L + G+ +++ M G
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
++ Y+++I+ K GN+ A TI+ + M F TY ++ G + ++
Sbjct: 215 LLIYNAVINALCKDGNVADA-ETIMKKVFESEMSPDTF---TYTSMILGHCRKHDLDSAL 270
Query: 351 NLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
+ + K EP+ + +I+ + G ++A ++ EM G
Sbjct: 271 QVFNQMAKEGCEPNTVTYST-----LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ A C +A +L +D+ + G + +V Y ALI S + A LF M
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRL 525
++ +Y ++ L+EN R + L+ + + P + +N +I +C G
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVT----YNEMIKGYCILGDP 441
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+ A + M+ N TY ++I GY + S L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 37/62 (59%)
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N++I+A CK G + DA+ ++++ + P+ TY S+I G+ S L +++++
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277
Query: 572 RK 573
++
Sbjct: 278 KE 279
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 150/338 (44%), Gaps = 13/338 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++G C L+ + D K++ +M++ G+ PN S+ + +G +++
Sbjct: 238 PNVVTYNTLIDGYC-KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF 296
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ + MN G+S V Y++LI GY K GN A L G S TY ++
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP----SVITYTSLI 352
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+ GN+ + ++ G+ + ++ G ++A+ +L EMN
Sbjct: 353 HSMCKAGNMNRAMEFL---DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G S + Y + +C + +A ++ D+ GL DV +Y ++ S D A
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD--WNSI 515
+ R+M E I +Y +++ G E R + +E++ RV + + + ++
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML---RVGLPPDEFTYTAL 526
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
I+A+C G LE A + M+ P+ TY LING
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 176/402 (43%), Gaps = 19/402 (4%)
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLK-VFEECCRIALDENLDFMKPNIYACNAALEGCCY 232
FMP L ++D ++ ++F + VF+E L+ + PN++ N + G C+
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKE----MLESQVS---PNVFTYNILIRGFCF 217
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA-LKGLQEKIVELESLMNEFGFSSQM 291
++ A + + M G PN ++ L Y L+ + + L S+ + G +
Sbjct: 218 A-GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK-GLEPNL 275
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLAN 351
+ Y+ +I+G + G ++ S L N + TY ++KG+ + GN
Sbjct: 276 ISYNVVINGLCREGRMKEVS----FVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH--QA 329
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
L++ A+ L G+ +I + G ++A LD+M G Y +
Sbjct: 330 LVMHAEMLR-HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
+ ++ EA +++ +++ +G V Y+ALI + + A ++ DM+E +
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
SY T+++G ++ + E+VE ++ T ++S+I FC+ R ++A
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKG-IKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
M+ + P++ TY +LIN Y L + +E+ K
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 110/509 (21%), Positives = 193/509 (37%), Gaps = 83/509 (16%)
Query: 83 NTDEAWKSFKSLTANSLFPSKPVTNSLI---AHLSSLQDNHNLKRAFASVVYVIEKNPKL 139
N D A F + P+ N+LI L + D L R+ A + P L
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA----LKGLEPNL 275
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLK 199
+ + V + G R +F L + M + Y + + + C K NF L
Sbjct: 276 ISYNVV--INGLCREGRMKEVSFVLTE-MNRRGYSLDEVTYNTLIKGYC-KEGNFHQALV 331
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
+ E R L P++ + + C +++ A + ++ M V G+ PNE ++
Sbjct: 332 MHAEMLRHGL-------TPSVITYTSLIHSMCKA-GNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
L ++ KG + + MN+ GFS +V Y++LI+G+ G +E A +
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL----- 438
Query: 320 GGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
+M++ S + +Y V+ GF ++ +V
Sbjct: 439 -EDMKEKGLSPDVVSYSTVLSGFCRSYDV------------------------------- 466
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
D+A + EM G Y ++ +C++ RT EA L ++ GL D
Sbjct: 467 -------DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE-----LM 492
Y ALI A D + A L +M E + +Y ++ GL + R L+
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 493 AAFLDEVVED-----------PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
F +E V +E K+ S+I FC G + +A + M+ +
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKS--VVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
P+ Y +I+G+ A ++ E+
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 82/176 (46%), Gaps = 2/176 (1%)
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS-QDFQSA 457
C V+ +K+Y + +A +V + G V +Y+A+++A+I S ++ A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
++F++M E+++ +Y ++ G ++ D++ E +N++I
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYNTLID 248
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+CK +++D + LR M EPN +Y +ING + V + E+ R+
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 2/200 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE-ATQLVMDISSS 432
++ + L L DKA SI+ A G G+ Y L A + R A + ++ S
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
+ +V Y+ LI + + A +LF M +Y T++ G + + +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
L + +E +N +I+ C+ GR+++ L M + ++ TY +LI
Sbjct: 260 FKLLRSMALKG-LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 553 GYVTAEQYFSVLMMWHEIKR 572
GY + L+M E+ R
Sbjct: 319 GYCKEGNFHQALVMHAEMLR 338
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 173/383 (45%), Gaps = 20/383 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN NA + C G S A K+ M G N ++ + L G EK +
Sbjct: 371 PNTVTYNALINELCVG-GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 429
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M + G +V Y++LI+GY+ GN+ +A+R LL L N + D + TY E+V
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR--LLDLMKENGCEPD--EWTYNELV 485
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
GF + G ++ + Q++ G+ + +I G D A S+L M
Sbjct: 486 SGFSKWGKLESAS---FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM 542
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC+ + Y + KE+R +EA ++ + GL +V Y LI+ + Q A
Sbjct: 543 GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFA 602
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
F +F DM + + +Y +++ GL + + + A + E+ +P ++ +++++
Sbjct: 603 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD-EAERMSEIGCEPTLDT----YSTLVS 657
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTD 577
C+ GR +A++ ++ M F P+ + Y SL+ + + L ++H I+
Sbjct: 658 GLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIE------ 711
Query: 578 GQKGIKFEHNLVDAFLYALVKGG 600
KG + ++ A + AL K G
Sbjct: 712 -AKGFQLHLSIYRALICALCKAG 733
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 130/310 (41%), Gaps = 20/310 (6%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
+ M G+ PN S+ L ++ G + + L M E G + + Y+++I+G K
Sbjct: 502 QEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKE 561
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKE-TYCEVVKGFLQNGNVKGLANLI--IEAQKLEP 361
A + +C +EQ TY ++ G +NG + + +E +K P
Sbjct: 562 NRFSEAEK---IC--DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 616
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
+ + S+ +G+ G +D+A + M+ GC L Y + C++ R E
Sbjct: 617 N-LYTYSSLIYGLCQE----GKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYE 667
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS-YLTIM 480
A QLV D+ G D Y +L+ A + + A +F + EA+ + L S Y ++
Sbjct: 668 AEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSI-EAKGFQLHLSIYRALI 726
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
L + + E A D ++E W ++ K G L+ + L M F
Sbjct: 727 CALCKAGQVEEAQALFDNMLEK-EWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNF 785
Query: 541 EPNDQTYLSL 550
PN QTY+ L
Sbjct: 786 TPNIQTYVIL 795
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 152/385 (39%), Gaps = 38/385 (9%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N N ++G C G + A + E M +G P ++ L Y KG L
Sbjct: 407 NTQTYNEIIKGLCLG-GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARL 465
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS---RTILLCLGGGNMEQSDF------- 328
LM E G Y+ L+SG+ K G LESAS + ++ C G N +
Sbjct: 466 LDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC--GLNPNPVSYTALIDGH 523
Query: 329 SKETYCEVVKGFLQ--------------NGNVKGLA--NLIIEAQK----LEPSGIVVDR 368
SK+ ++ L+ N + GL+ N EA+K + G++ +
Sbjct: 524 SKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNV 583
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+I G + A I +M C L Y + C+E + EA ++
Sbjct: 584 ITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERM--- 640
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
S G + + Y L+ F A L +DM+E + Y +++ +N
Sbjct: 641 -SEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLE 699
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
+ A + +E ++ + ++I A CKAG++E+A+ M+ ++ ++ +
Sbjct: 700 VD-HALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWT 758
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRK 573
L++G + + + + H ++ K
Sbjct: 759 VLVDGLLKEGELDLCMKLLHIMESK 783
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 162/405 (40%), Gaps = 52/405 (12%)
Query: 168 MFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKP--------N 219
+ ++R F P + ++ CR EE R+A DF+ +
Sbjct: 118 LVRDRVFAPADHIRILMIKACRNE----------EEIRRVA-----DFLNEISGMGFGFS 162
Query: 220 IYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELE 279
+Y+CN L + V A + + M G++P+ +F L + + KG K+ E E
Sbjct: 163 LYSCNTLLIQLA-KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG---KVREAE 218
Query: 280 SLMNE---FGFSSQMVFYSSLISGYVKLGNLESA----SRTILLCLGGGNMEQSDFSKET 332
++++ + S + Y+SLI G+ + NL+ A R + E D + T
Sbjct: 219 LILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV--------KEGCDPNSVT 270
Query: 333 YCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
Y ++ G G V +++ E + +EP+ I+A + ++A +
Sbjct: 271 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP-----ITALCAIEHEEEAIEL 325
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+ M GC + Y + + + A L + GL + Y+ALI
Sbjct: 326 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 385
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-DPRVEVKT 509
F +A +F M +Y I+ GL E +++++ P V T
Sbjct: 386 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 445
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N++I+ + G + +A R L M EP++ TY L++G+
Sbjct: 446 --YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF 488
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 174/418 (41%), Gaps = 97/418 (23%)
Query: 198 LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQS--VSDAEKVIETMSVLGVRPN 255
L++F++ R+ L KPN+ CN L G S +S A +V + M +GV N
Sbjct: 151 LQIFQKMIRLKL-------KPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLN 203
Query: 256 ESSFGFLAYLYALKG-LQEKIVELESLMNEF----------------------------- 285
+F L Y L+G L++ + LE +++EF
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 286 ------GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVV 337
G V Y++L+ GY KLG+L+ A + + L M+Q++ + TY ++
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL------MKQTNVLPDLCTYNILI 317
Query: 338 KGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
G G+++ L+ +++ KL+P + + +I C LGLS +A ++++M
Sbjct: 318 NGLCNAGSMREGLELMDAMKSLKLQPDVVTYNT-----LIDGCFELGLSLEARKLMEQME 372
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD-ISSSGLQLDVGNYDALIEASITSQDF 454
G + +LK CKE + T+ V + + G D+ Y LI+A + D
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL 432
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A + R+M + KG +++ T N+
Sbjct: 433 SGALEMMREMGQ------KG------------------------------IKMNTITLNT 456
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
I+ A CK +L++A L F ++ TY +LI G+ E+ L MW E+K+
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 154/341 (45%), Gaps = 17/341 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF-LAYLYALKGLQEK 274
++P++ N ++GC + L +A K++E M GV+ N+ + L +L + +
Sbjct: 341 LQPDVVTYNTLIDGC-FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV 399
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+++ L++ GFS +V Y +LI Y+K+G+L S + ++ +G ++ + + T
Sbjct: 400 TRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL-SGALEMMREMGQKGIKMNTITLNT-- 456
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ + + NL+ A K G +VD +I +KA + DEM
Sbjct: 457 -ILDALCKERKLDEAHNLLNSAHK---RGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ + + + C +T A + +++ SGL D ++++I
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 455 QSAFSLFRDMREARIYDLKGSYLT---IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ AF + E+ + K T ++ GL + E F + ++E+ EV T
Sbjct: 573 EKAFEFYN---ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER--EVDTVT 627
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+N++I AFCK +L++A L M EP+ TY S I+
Sbjct: 628 YNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 157/373 (42%), Gaps = 43/373 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP++ +CN+ L +S S A V + M L + P+ + + Y G E+ V
Sbjct: 28 KPSLRSCNSLLSNLVKRGESYS-AVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAV 86
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
E M + GF V Y+SL+ GYV LG++E A + G M +K T +
Sbjct: 87 EFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMR----NKVTLTLL 142
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+KG+ + V+ ++ E +K G+VVD +I +G A + DEM
Sbjct: 143 IKGYCKQCKVEEAEKVLREMEK--EDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLK 200
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVM------------------------DISS- 431
G + L V + YCK + E +L+M +SS
Sbjct: 201 VGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSK 260
Query: 432 ----------SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
G++ V Y+ L++ D++ A L+ M + + + Y T++
Sbjct: 261 AFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLD 320
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
GL + D+++ + + +N++I+ CK G ++ AK T +RM L +
Sbjct: 321 GLFKMGDFSRALTLWDDILARG-INKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCK 379
Query: 542 PNDQTYLSLINGY 554
P+ TY +L +GY
Sbjct: 380 PDGITYRTLSDGY 392
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 169/468 (36%), Gaps = 90/468 (19%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+K N++ CN+ + G C Q V + E+++ M L ++P+ S+ L Y GL K
Sbjct: 203 LKMNLFVCNSLINGYCKNGQ-VHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKA 261
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ M G +V Y++L+ G + G+ + A R L L G ++ YC
Sbjct: 262 FNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTP----NEVGYCT 317
Query: 336 VVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G + G+ L I A+ + S + +I+ +G D A
Sbjct: 318 LLDGLFKMGDFSRALTLWDDILARGINKSIYAFNT-----MINGLCKMGEMDGAKETFKR 372
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEA------------------------------- 422
M GC Y YCK EA
Sbjct: 373 MEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKK 432
Query: 423 ----TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-------------- 464
L+ ++ + GL +V Y ALI AFS + +M
Sbjct: 433 ISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSK 492
Query: 465 ------REARIYDLKGSYLTIMTG--LMENHR----------PELMAAFLDEVVEDPRVE 506
R RI D L M L+ +HR +L + + +++ ++
Sbjct: 493 IVSSLYRLGRI-DEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIK 551
Query: 507 VKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+ +N + CK+G++ DA+R + F P++ TY +LI+G+ A
Sbjct: 552 FSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEA 611
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
+ E+ KG+ +A L L K G+ D ++ +K
Sbjct: 612 FNLRDEMV-------NKGLVPNITTYNALLNGLCKSGYLDRARRLFDK 652
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/393 (18%), Positives = 154/393 (39%), Gaps = 43/393 (10%)
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-------------- 310
+YA KG+ + + + M ++G + +SL+S VK G SA
Sbjct: 5 VYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVP 64
Query: 311 ---SRTILL---CLGGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLI 353
+ I++ C G +F +E +Y +V G++ G+++G ++
Sbjct: 65 DVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVL 124
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA-CGCSVGLGVYVPTLKA 412
+ + G++ ++ +I ++A +L EM G V Y +
Sbjct: 125 ---KFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDG 181
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
YCK + +A ++ ++ GL++++ ++LI + L MR+ +
Sbjct: 182 YCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPD 241
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
SY T++ G + D+++ +E +N+++ C+ G +DA R
Sbjct: 242 SYSYCTLVDGYCRDGLSSKAFNVCDQMLRKG-IEPTVVTYNTLLKGLCRFGDYKDALRLW 300
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAF 592
M+ PN+ Y +L++G + L +W +I +GI +
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDIL-------ARGINKSIYAFNTM 353
Query: 593 LYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYK 625
+ L K G D + ++ +E+ D Y+
Sbjct: 354 INGLCKMGEMDGAKETFKRMEELGCKPDGITYR 386
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PNI NA L G C + A ++ + + + G+ PN ++ L Y G + ++
Sbjct: 625 PNITTYNALLNGLCKS-GYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALD 683
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M + G S ++ YSSLI+G+ K ++E A + +L + N++Q + T+ ++V
Sbjct: 684 LRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMK-LLNEMKASNVDQ---TIATFSKLV 739
Query: 338 KGFLQNGNVKGLANL 352
+G +Q+G+VK ++ L
Sbjct: 740 EGCIQHGDVKKMSKL 754
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 7/195 (3%)
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLAN 351
V Y+ ++G K G + A R L L G+ +F TYC ++ GF G V N
Sbjct: 558 VVYNIAMAGLCKSGKVNDARR-FFLGLSHGSFTPDNF---TYCTLIHGFSAAGYVNEAFN 613
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
L ++ G+V + + +++ G D+A + D+++ G + Y +
Sbjct: 614 L---RDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILID 670
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
YCK EA L + G+ + Y +LI D + A L +M+ + +
Sbjct: 671 GYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQ 730
Query: 472 LKGSYLTIMTGLMEN 486
++ ++ G +++
Sbjct: 731 TIATFSKLVEGCIQH 745
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 146/391 (37%), Gaps = 44/391 (11%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE-- 273
+ +IYA N + G C + + A++ + M LG +P+ ++ L+ Y G E
Sbjct: 343 INKSIYAFNTMINGLCK-MGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEA 401
Query: 274 ---------------------------------KIVELESLMNEFGFSSQMVFYSSLISG 300
K+++L + M+ G S +V Y +LI+G
Sbjct: 402 FKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAG 461
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
+ G L+ A +G G + +V + G + AN+++ QK+
Sbjct: 462 WCDQGRLDKAFSAYFEMIGKGFAPNVIICSK----IVSSLYRLGRIDE-ANMLL--QKMV 514
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
+V+D +A + K LDE VY + CK +
Sbjct: 515 DFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVN 574
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
+A + + +S D Y LI + AF+L +M + +Y ++
Sbjct: 575 DARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALL 634
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL ++ + D++ + +N +I +CK+G +A +M+
Sbjct: 635 NGLCKSGYLDRARRLFDKLHLKGLIP-NVVTYNILIDGYCKSGSPREALDLRGKMLKEGI 693
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
P+ TY SLING+ + + +E+K
Sbjct: 694 SPSIITYSSLINGFCKQSDVEEAMKLLNEMK 724
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 163/368 (44%), Gaps = 28/368 (7%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ ++ + G C G V DA ++ M +G RP+ + + GL V
Sbjct: 136 EPDVVTVSSLINGFCQG-NRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
EL M G + V Y+SL++G G A+R + +M D T+
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM------RDMVMRDIVPNVITFT 248
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKL--EPSGIVVDRSVGF--GIISACVNLGLSDKAHSI 390
V+ F++ G EA KL E + VD V +I+ G D+A +
Sbjct: 249 AVIDVFVKEGKFS-------EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
LD M GC + Y + +CK R E T+L +++ GL D Y+ +I+
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ +A +F M ++R +++ +Y ++ GL N R E A L E ++ +E+
Sbjct: 362 AGRPDAAQEIFSRM-DSR-PNIR-TYSILLYGLCMNWRVE-KALVLFENMQKSEIELDIT 417
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+N +IH CK G +EDA R + +P+ +Y ++I+G+ Q+ +++
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY--- 474
Query: 571 KRKISTDG 578
RK+ DG
Sbjct: 475 -RKMQEDG 481
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 1/189 (0%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D S+ M CG L Y + C+ R A +V + G + DV +L
Sbjct: 86 DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I A L M E Y TI+ G + D + D
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG- 204
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
V +NS++ C +GR DA R +R M+ PN T+ ++I+ +V ++ +
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 565 MMWHEIKRK 573
++ E+ R+
Sbjct: 265 KLYEEMTRR 273
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 152/350 (43%), Gaps = 41/350 (11%)
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
SFG + G EK +L + EFGFS +V Y++LI G K G +E A + +
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKA-KDLFFE 223
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
+G + +++ TY ++ G +NG K + +K++ G+ + +++
Sbjct: 224 MGKFGLVANEW---TYTVLIHGLFKNGIKKQGFEMY---EKMQEHGVFPNLHTYNCVMNQ 277
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
G + A + DEM G S + Y + C+E + EA +++ + S G+ +
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPN 337
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-------------- 483
+ Y+ LI+ + A SL RD++ + +Y +++G
Sbjct: 338 LITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397
Query: 484 -MENH--RPE------LMAAF-----------LDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
ME +P L+ F L +E+ + H ++ +IH FC G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKG 457
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
R+ +A R + M+ +FEPN+ Y +++ GY + L ++ E++ K
Sbjct: 458 RMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEK 507
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 22/367 (5%)
Query: 196 AFLKVFEECCRIA-LDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKVIET 246
+F V + CC ++++ D + PN+ ++GCC + + A+ +
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGE-IEKAKDLFFE 223
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
M G+ NE ++ L + G++++ E+ M E G + Y+ +++ K G
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGR 283
Query: 307 LESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
+ A + M + S TY ++ G + AN +++ +++ GI
Sbjct: 284 TKDAFKVF------DEMRERGVSCNIVTYNTLIGGLCREMKANE-ANEVMD--QMKSDGI 334
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ +I + KA S+ ++ + G S L Y + +CK+ T+ A +
Sbjct: 335 NPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
+V ++ G++ Y LI+ S + + A L M E + +Y ++ G
Sbjct: 395 VVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFC 454
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
R + +VE + E +N+++ +CK G A R R M + PN
Sbjct: 455 IKGRMNEASRLFKSMVEK-KFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNV 513
Query: 545 QTYLSLI 551
+Y +I
Sbjct: 514 ASYRYMI 520
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 104/253 (41%), Gaps = 12/253 (4%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
NI N + G C +++ ++A +V++ M G+ PN ++ L + K + L
Sbjct: 302 NIVTYNTLIGGLCREMKA-NEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSL 360
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEV 336
+ G S +V Y+ L+SG+ K G+ A + + ME+ SK TY +
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVV------KEMEERGIKPSKVTYTIL 414
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ F ++ N++ L +E G+ D +I G ++A + M
Sbjct: 415 IDTFARSDNMEKAIQL---RSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVE 471
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
+Y + YCKE + A +L ++ L +V +Y +IE + +
Sbjct: 472 KKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKE 531
Query: 457 AFSLFRDMREARI 469
A L M ++ I
Sbjct: 532 AEGLVEKMIDSGI 544
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 119/291 (40%), Gaps = 22/291 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKI 275
PN++ N + C ++ DA KV + M GV N + Y + GL + K
Sbjct: 266 PNLHTYNCVMNQLCKDGRT-KDAFKVFDEMRERGVSCN-----IVTYNTLIGGLCREMKA 319
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
E +M++ G + ++ Y++LI G+ + L + + LC +++ S
Sbjct: 320 NEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKL---GKALSLCR---DLKSRGLSPSL 373
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY +V GF + G+ G ++ E +E GI + +I +KA +
Sbjct: 374 VTYNILVSGFCKKGDTSGAGKVVKE---MEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
M G + + Y + +C + R EA++L + + + Y+ ++
Sbjct: 431 RSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCK 490
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
A LFR+M E + SY ++ L + + + ++++++
Sbjct: 491 EGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMID 541
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 116/310 (37%), Gaps = 13/310 (4%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
E M GV PN ++ + G + ++ M E G S +V Y++LI G +
Sbjct: 257 EKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
A+ + M+ + TY ++ GF V+ L + + L+
Sbjct: 317 MKANEANEVM------DQMKSDGINPNLITYNTLIDGFC---GVRKLGKALSLCRDLKSR 367
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G+ ++S G + A ++ EM G Y + + + +A
Sbjct: 368 GLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
QL + GL DV Y LI A LF+ M E + + Y T++ G
Sbjct: 428 IQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLG 487
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
+ E+ E+ + + +I CK + ++A+ + +MI P
Sbjct: 488 YCKEGSSYRALRLFREM-EEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGP 546
Query: 543 NDQTYLSLIN 552
+D + L+LI+
Sbjct: 547 SD-SILNLIS 555
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 73/184 (39%), Gaps = 9/184 (4%)
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y+ +I A + SQ S+ F +M + + ++T ++ + F +E
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-- 154
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+V + + + +I C+AG +E + L + F PN Y +LI+G +
Sbjct: 155 SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
++ E+ G+ G+ ++ L K G ++ EK QE VF +
Sbjct: 215 EKAKDLFFEM-------GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPN 267
Query: 621 KWKY 624
Y
Sbjct: 268 LHTY 271
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 196/464 (42%), Gaps = 32/464 (6%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T TL+ + ++ AF L++ M + G ++ +C + +E+
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD--------MGCYED 338
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSF-GF 261
R+ +D +PN+Y A + G C G+ V A + MS GV PN ++
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKV--AIGLFHRMSRDGVFPNTVTYNAL 396
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+ L + ++ V L +LM G S +V Y+ +I GY LG+ + A +
Sbjct: 397 INILVENRRIKYAFVVL-NLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM------N 449
Query: 322 NMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
NM Q S TY ++KG+ +GN ++ + G D +I
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL---DLMRDGGCKPDEWSYTELICGFC 506
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
+ + A + +EM G Y + YCK+ + AT L+ + SG + +V
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y+ LI +F A L + M E I+ +Y ++ GL +N L +++
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA-- 557
+E + ++S+I A + G++E+A+ + P++ TY+ +I Y+ +
Sbjct: 627 IEQGCLP-NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685
Query: 558 -EQYFSVL--MMWHEIKRKISTDGQ--KGIKFEHNLVDAFLYAL 596
E F+ L M+ + + T G KG+K E+ L D L AL
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAAL 729
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 144/368 (39%), Gaps = 41/368 (11%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PN A ++G C + + A ++E M G RPN ++ L + +
Sbjct: 524 DGLCPNEVTYTALIDGYCKD-EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-T 332
EL +M E G +V Y+++I G K G S ++ L + +EQ T
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG-----STSLALEMFNKMIEQGCLPNLLT 637
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y +++ Q G V+ NL E LE G++ D +I A + G + A + L
Sbjct: 638 YSSLIRALGQEGKVEEAENLFAE---LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEH-----RTAEATQLVMDIS----------------- 430
M GC L Y +K E+ R A +V + S
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAK 754
Query: 431 ----SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
GL + V N AL+ T+ + A L M + + +Y +++ L+
Sbjct: 755 LAELDPGLSVQVQN--ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRV 812
Query: 487 HRPEL-MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+L M F + EV + + +I A C+ R ++A+ T M+ + P+D
Sbjct: 813 RNVDLAMGVFKHMSTQG--CEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDV 870
Query: 546 TYLSLING 553
LI+G
Sbjct: 871 VQAVLIDG 878
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 5/188 (2%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+ H +L E G L +Y + A CK+ A+A ++ + S + D Y ++
Sbjct: 201 DRYHRMLSE----GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSM 256
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I D SA +F M + +Y T++ GL ++ R + E++
Sbjct: 257 ILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH-G 315
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+ H I A C G EDA R M EPN TY +LI+G + +
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAI 375
Query: 565 MMWHEIKR 572
++H + R
Sbjct: 376 GLFHRMSR 383
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 137/339 (40%), Gaps = 18/339 (5%)
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
C+ ++++ ++ +S G+R ++ L + G+ +++ M G
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
++ Y+++I+ K GN+ A TI+ + M F TY ++ G + ++
Sbjct: 215 LLIYNAVINALCKDGNVADA-ETIMKKVFESEMSPDTF---TYTSMILGHCRKHDLDSAL 270
Query: 351 NLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
+ + K EP+ + +I+ + G ++A ++ EM G
Sbjct: 271 QVFNQMAKEGCEPNTVTYST-----LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ A C +A +L +D+ + G + +V Y ALI S + A LF M
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRL 525
++ +Y ++ L+EN R + L+ + + P + +N +I +C G
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVT----YNEMIKGYCILGDP 441
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+ A + M+ N TY ++I GY + S L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 37/62 (59%)
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N++I+A CK G + DA+ ++++ + P+ TY S+I G+ S L +++++
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277
Query: 572 RK 573
++
Sbjct: 278 KE 279
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 196/464 (42%), Gaps = 32/464 (6%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T TL+ + ++ AF L++ M + G ++ +C + +E+
Sbjct: 457 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD--------MGCYED 508
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSF-GF 261
R+ +D +PN+Y A + G C GL V A + MS GV PN ++
Sbjct: 509 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKV--AIGLFHRMSRDGVFPNTVTYNAL 566
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+ L + ++ V L +LM G + +V Y+ +I GY LG+ + A +
Sbjct: 567 INILVENRRIKYAFVVL-NLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVM------N 619
Query: 322 NMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
NM Q S TY ++KG+ +GN ++ + G D +I
Sbjct: 620 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL---DLMRDGGCKPDEWSYTELICGFC 676
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
+ + A + +EM G Y + YCK+ + AT L+ + SG + +V
Sbjct: 677 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 736
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y+ LI +F A L + M E I+ +Y ++ GL +N L +++
Sbjct: 737 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 796
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA-- 557
+E + ++S+I A + G++E+A+ + P++ TY+ +I Y+ +
Sbjct: 797 IEQGCLP-NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 855
Query: 558 -EQYFSVL--MMWHEIKRKISTDGQ--KGIKFEHNLVDAFLYAL 596
E F+ L M+ + + T G KG+K E+ L D L AL
Sbjct: 856 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAAL 899
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 142/367 (38%), Gaps = 39/367 (10%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PN A ++G C + + A ++E M G RPN ++ L + +
Sbjct: 694 DGLCPNEVTYTALIDGYCKD-EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 752
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-T 332
EL +M E G +V Y+++I G K G S ++ L + +EQ T
Sbjct: 753 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG-----STSLALEMFNKMIEQGCLPNLLT 807
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y +++ Q G V+ NL E LE G++ D +I A + G + A + L
Sbjct: 808 YSSLIRALGQEGKVEEAENLFAE---LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 864
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEH-----RTAEATQLVMDIS----------------- 430
M GC L Y +K E+ R A +V + S
Sbjct: 865 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAK 924
Query: 431 ----SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
GL + V N AL+ T+ + A L M + + +Y +++ L+
Sbjct: 925 LAELDPGLSVQVQN--ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRV 982
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+L + EV + + +I A C+ R ++A+ T M+ + P+D
Sbjct: 983 RNVDLAMGVFKHM-STQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVV 1041
Query: 547 YLSLING 553
LI+G
Sbjct: 1042 QAVLIDG 1048
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 5/188 (2%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+ H +L E G L +Y + A CK+ A+A ++ + S + D Y ++
Sbjct: 371 DRYHRMLSE----GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSM 426
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I D SA +F M + +Y T++ GL ++ R + E++
Sbjct: 427 ILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH-G 485
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+ H I A C G EDA R M EPN TY +LI+G + +
Sbjct: 486 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 545
Query: 565 MMWHEIKR 572
++H + R
Sbjct: 546 GLFHRMSR 553
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 90/484 (18%), Positives = 173/484 (35%), Gaps = 78/484 (16%)
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
C+ ++++ ++ +S G+R ++ L + G+ +++ M G
Sbjct: 325 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 384
Query: 291 MVFYSSLISGYVKLGNLESASRTIL-----------------LCLGGGNMEQSD------ 327
++ Y+++I+ K GN+ A TI+ + LG D
Sbjct: 385 LLIYNAVINALCKDGNVADA-ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 443
Query: 328 --FSKE-------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
+KE TY ++ G +G V +LI +++ GI+ G I A
Sbjct: 444 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLI---REMILHGILPTAHTCTGPIIAL 500
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
++G + A + +M GC + Y + C A L +S G+ +
Sbjct: 501 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 560
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIY-----------------DLKGSYLTIMT 481
Y+ALI + ++ + AF + M ++ D K + L +
Sbjct: 561 VTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNN 620
Query: 482 GLMENHRPELMA------AFLD-----------EVVEDPRVEVKTHDWNSIIHAFCKAGR 524
L H L+ + D +++ D + + +I FCK +
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 680
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF 584
+E A M+ PN+ TY +LI+GY E+ + + +KR G +
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR-------SGCRP 733
Query: 585 EHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRN 644
+ ++ L K F ++ + E +F + Y A ++ K L
Sbjct: 734 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYT-AMIDGLCKNGSTSLALEM 792
Query: 645 FKKM 648
F KM
Sbjct: 793 FNKM 796
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 175/430 (40%), Gaps = 31/430 (7%)
Query: 131 YVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICR- 189
Y +++ L +T ++LL N A+ L MF+ R + + +C+
Sbjct: 175 YTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKE 234
Query: 190 ----KNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIE 245
K +FV ++ +KPNI N + G C + V A+ ++
Sbjct: 235 GKLKKAKDFVGHMET-------------SGVKPNIVTYNTIVHGYCSSGR-VEAADAILT 280
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
TM + P+ ++G L +G E+ ++ M + G V Y++LI G+ G
Sbjct: 281 TMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV 365
NL+ AS L G + TY ++ +I E Q+ S
Sbjct: 341 NLDMASAYKDEMLKKG----ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+ ++ C N + KA + DEM A G Y L K++R EA L
Sbjct: 397 ITYNILINGYCRCAN---AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
I+S G+ D ++ALI+ ++ + + AF L +DM ++ + ++ TIM G
Sbjct: 454 FKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+ E DE+ R +K +N++I + + G ++DA R M+ F P
Sbjct: 514 EGKVEEARELFDEM---KRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570
Query: 544 DQTYLSLING 553
TY +L+ G
Sbjct: 571 VLTYNALVQG 580
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ CKE + +A V + +SG++ ++ Y+ ++ +S ++A ++ M+ +I
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLE 526
+Y ++++G+ + R E + +E+V+ P + +N++I FC G L+
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVI----YNTLIDGFCNKGNLD 343
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK-ISTDG 578
A M+ P TY SLI+ ++ M EI+ K IS D
Sbjct: 344 MASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 118/297 (39%), Gaps = 29/297 (9%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I+ G KA + M G + Y + YC R A ++ +
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ D Y +LI + A +F +M + + Y T++ G ++ +
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A+ DE+++ + +NS+IHA R ++A+ ++ + P+ TY LING
Sbjct: 347 AYKDEMLKK-GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405
Query: 554 YV----------------------TAEQYFSVLMMWHEIKR-KISTDGQKGIKFEHNLVD 590
Y T + Y S+L + + R K + D K I E L D
Sbjct: 406 YCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPD 465
Query: 591 AFLY-ALVKGGFFDA----VMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRK 642
A ++ AL+ G ++ ++++ MKV D+ + + ++ KV + R+
Sbjct: 466 AIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 143/348 (41%), Gaps = 55/348 (15%)
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEG-CCYGLQSVS 238
+G + +C K K+FEE + L +P+ N ++G C G ++
Sbjct: 294 YGSLISGMC-KQGRLEEASKIFEEMVQKGL-------RPSAVIYNTLIDGFCNKGNLDMA 345
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYS 295
A K + M G+ P S++ L ++AL ++++ E E ++ E G S + Y+
Sbjct: 346 SAYK--DEMLKKGISPTMSTYNSL--IHAL-FMEQRTDEAECMIKEIQEKGISPDAITYN 400
Query: 296 SLISGYVKLGNLESA------------------SRTILLCLGGGN-MEQSD--FSKET-- 332
LI+GY + N + A ++L L N M+++D F K T
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460
Query: 333 --------YCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ ++ G N NVKG L+ ++ K+ P + + I+ G
Sbjct: 461 GVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNT-----IMQGHCREG 515
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
++A + DEM G + + Y + +A ++ ++ +G V Y+
Sbjct: 516 KVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYN 575
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
AL++ +Q+ A L ++M + +Y T++ G+ + + P+
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPD 623
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 8/251 (3%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I +C ++ +D+A M G + L + K +RT A L ++
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ V ++ +I + A M + + +Y TI+ G + R E
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A L ++ ++E + + S+I CK GRLE+A + M+ P+ Y +LI+G
Sbjct: 277 AIL-TTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDG 335
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
+ L M K ++ +KGI + ++ ++AL D ++++ Q
Sbjct: 336 FCNKGN----LDMASAYKDEML---KKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQ 388
Query: 614 EMKVFVDKWKY 624
E + D Y
Sbjct: 389 EKGISPDAITY 399
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
+D LI++ AF F M+E + + ++++ ++ +R E E+
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
R++ + +N +I+ CK G+L+ AK + M +PN TY ++++GY ++ +
Sbjct: 214 R-LRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272
Query: 561 FSVLMMWHEIKR-KISTD 577
+ + +KR KI D
Sbjct: 273 EAADAILTTMKRQKIEPD 290
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 17/231 (7%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIE 134
+H + TDEA K + + P N LI N K+AF ++
Sbjct: 368 IHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCA---NAKKAFLLHDEMLA 424
Query: 135 KNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNF 194
K +T +LL + N A L K + +P + L+D NSN
Sbjct: 425 SGIKPTK-KTYTSLLHVLSKKNRMKEADDLFK-KITSEGVLPDAIMFNALIDGHCSNSNV 482
Query: 195 VAFLKVFEECCRIALDENLDFMK--PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
FE L +++D MK P+ N ++G C V +A ++ + M G+
Sbjct: 483 KG---AFE------LLKDMDRMKVPPDEVTFNTIMQGHCRE-GKVEEARELFDEMKRRGI 532
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+P+ SF L Y+ +G + + + M + GF+ ++ Y++L+ G K
Sbjct: 533 KPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCK 583
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 161/363 (44%), Gaps = 20/363 (5%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
ENL + P++ + N + GC +S+A K++E MS GV+PN + + Y +G
Sbjct: 340 ENLKLL-PDVVSYNTLINGC-LEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEG 397
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
+ + M E GFS V Y++LI+GY K GN+ A RT+ +G NM+ +
Sbjct: 398 KMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE-MGRKNMKMDSVTL 456
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHS 389
T +++ + ++ L+ A+K G +D V +G +I G D+A
Sbjct: 457 NT---ILRTLCREKKLEEAYKLLSSARK---RGYFIDE-VSYGTLIVGYFKDGNVDRALK 509
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ DEM Y + C+ +T +A + ++ SGL D Y+ ++
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC 569
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-MENHRPELMAAFLDEVVEDPRVEVK 508
D + AF M E + ++ GL ME + + F V + ++
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTV 629
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT------AEQYFS 562
T +N++I + CK GRL+DA L M + P+ TY ++I AE++ S
Sbjct: 630 T--YNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMS 687
Query: 563 VLM 565
++
Sbjct: 688 KML 690
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 160/413 (38%), Gaps = 84/413 (20%)
Query: 216 MKPNIYACNAALEGCCY--GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
++PN+ CN L SVS + + LG+ PN ++F + Y Y L+ +
Sbjct: 166 LRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFK 225
Query: 274 KIVELESLMNEFGFSSQMVFYSS-----------------------------------LI 298
VE ++M ++ S V Y++ L+
Sbjct: 226 DAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEA 356
GY K+G L+ A+ I L M Q++ + TY ++ G G ++ L E
Sbjct: 286 YGYCKMGWLKEAANVIEL------MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM 339
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+ L+ VV + +I+ C+ +A +L+EM+ G + +K YCKE
Sbjct: 340 ENLKLLPDVVSYNT---LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKE 396
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM------------ 464
+ +A+ + + SG D Y+ LI + + AF +M
Sbjct: 397 GKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTL 456
Query: 465 --------REARI---YDL------KG------SYLTIMTGLMENHRPELMAAFLDEVVE 501
RE ++ Y L +G SY T++ G ++ + DE+ E
Sbjct: 457 NTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE 516
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ T +N II C+ G+ E A L ++ P++ TY ++++GY
Sbjct: 517 KEIIP-STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGY 568
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 126/598 (21%), Positives = 227/598 (37%), Gaps = 97/598 (16%)
Query: 63 LTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNL 122
LT + L+T + + + A++ FK + L P+ N+L+ L +H++
Sbjct: 130 LTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSV 189
Query: 123 ---KRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFEL 179
+ AF + LG + N NT F +V +
Sbjct: 190 SFSREAFNDAIK-----------------LGIVPNVNT----FNIV-------------I 215
Query: 180 WGGFLVDICRKNSNFVAFLKVFEE--CCRIALDENLDFMKPNIYACNAALEGCCYGLQSV 237
+G L + K + V FL V + C P+ N L+ C +
Sbjct: 216 YGYCLEN---KFKDAVEFLNVMGKYNC------------SPDNVTYNTILDALCKK-GRL 259
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
DA ++ M G+ PN +++ L Y Y G ++ + LM + + Y+ L
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319
Query: 298 ISGYVKLGNLESA-------SRTILL-------CLGGGNMEQSDFSKE------------ 331
I+G G +E A LL L G +E S S+
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379
Query: 332 -----TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
T+ +VK + + G + +N I K+E SG D +I+ G +
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTI---TKMEESGFSPDCVTYNTLINGYCKAGNMGE 436
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A +DEM + L+ C+E + EA +L+ G +D +Y LI
Sbjct: 437 AFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIV 496
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ A L+ +M+E I +Y I+ GL + + E + L+E++E +
Sbjct: 497 GYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLP 556
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+T +N+I+H +C+ G +E A + +M+ F+P+ T L+ G L +
Sbjct: 557 DET-TYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKL 615
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
++ T KG + + + +L K G D ++ + +E ++ D + Y
Sbjct: 616 FN-------TWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTY 666
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 133/350 (38%), Gaps = 27/350 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
MK + N L C + + +A K++ + G +E S+G L Y G ++
Sbjct: 449 MKMDSVTLNTILRTLCRE-KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRA 507
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++L M E V Y+ +I G + G E A + L G + + TY
Sbjct: 508 LKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPD----ETTYNT 563
Query: 336 VVKGFLQNGNVKG---LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ G+ + G+V+ N ++E +P + + C+ G+ +KA + +
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVE-NSFKPDVFTCN----ILLRGLCME-GMLEKALKLFN 617
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+ G ++ Y + + CKE R +A L+ ++ L D Y+A+I A S
Sbjct: 618 TWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSG 677
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A M E KG + L N + E V +W
Sbjct: 678 RIREAEEFMSKMLE------KGXLPXQVLQLDXNE----TVVTSETSEESDSSSVAYSEW 727
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
I C G+ +DA R + TY++L++G + + S
Sbjct: 728 ---IKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSIS 774
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/545 (21%), Positives = 212/545 (38%), Gaps = 63/545 (11%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
N+ T + + N DEA+K K ++A + P+K ++LI L L R
Sbjct: 347 NVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRIL 406
Query: 127 ASVV------------YVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFA----------- 163
+ VIE + + + + LL MR + +
Sbjct: 407 KQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQI 466
Query: 164 ------------LVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDE 211
++ K F+ L G+ CR+ S F C
Sbjct: 467 GESERASGLLEQMIADGLKPNAFVYAPLISGY----CREGS--------FSLACETLKKM 514
Query: 212 NLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIE---TMSVLGVRPNESSFGFLAYLYAL 268
+ + P++Y N+ + GL +V ++ IE M G +PN+ ++G L + Y++
Sbjct: 515 TRENLTPDLYCYNSLI----IGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSM 570
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
G EK +L M G + Y+ ++ GY K NLE S T+ L G M +
Sbjct: 571 AGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRL 630
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
Y V+ +G+++ +++ +E +G+V D + +IS +KA
Sbjct: 631 ----YGIVIHNLSSSGHMQAAVSVL---SVIEKNGLVPDSLIYGSLISGFCKAADMEKAV 683
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+LDEM G G+ Y + +CK + A + I GL + Y LI+
Sbjct: 684 GLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGY 743
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ D + A L+ +M + Y + G + + +E++ R
Sbjct: 744 CKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIA--RGYAI 801
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+N+++H FCK G+L++ + L M+ P+ T +++ G A + ++
Sbjct: 802 ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFV 861
Query: 569 EIKRK 573
E+++K
Sbjct: 862 ELQQK 866
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 148/368 (40%), Gaps = 35/368 (9%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V D +V+ M LG+ P+ L + + ++ M G S + YS+
Sbjct: 189 VRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYST 248
Query: 297 LISGYVKLGNLESASRTIL--------------------LCLGGGNMEQSDFSKE----- 331
LI Y K+ +LESA + + LC G E + KE
Sbjct: 249 LIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYG 308
Query: 332 ------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
TY ++ G + G L+ E + +G++ + V +I + G +D
Sbjct: 309 LVPDGFTYGAIINGLCKRGRPDQAKCLLDE---MSCAGLMPNVVVYSTLIDGFMRQGNAD 365
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A I+ EM+A G Y ++ CK R A++++ ++ G D Y+ +I
Sbjct: 366 EAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVI 425
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
E + + + AF L +MR+ I +Y I+ GL + E + L++++ D +
Sbjct: 426 EGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIAD-GL 484
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
+ + +I +C+ G A TL++M P+ Y SLI G + +
Sbjct: 485 KPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIE 544
Query: 566 MWHEIKRK 573
+ E+ K
Sbjct: 545 YYDEMLEK 552
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 157/349 (44%), Gaps = 33/349 (9%)
Query: 218 PNIYACNAALEGCCYG--LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
P++ + + + G C G LQ V K+I+ M + G++PN ++ + L G K+
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVL---KLIQEMQMKGLKPNLYTYNSIILLLCKSG---KV 61
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
+ E ++ E G V Y++LI G+ KLGN+++A + ME+ +
Sbjct: 62 DDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLF------DEMEKQRIVPDF 115
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
Y V+ G + G + + K+ G+ D +I G +KA S+
Sbjct: 116 IAYTAVICGLCRCGKMMEADKVF---NKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSL 172
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
++M G + + Y CK + A +L+ ++ GLQL++ Y++L+
Sbjct: 173 HNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCK 232
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIM-----TGLMENHRPELMAAFLDEVVEDPRV 505
S + + A L +M A +Y ++ T+M TG M EL+ LD ++ P V
Sbjct: 233 SGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAH-ELLREMLDRGLQ-PTV 290
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N +++ FC +G LED +R L M+ PN TY SL+ Y
Sbjct: 291 IT----FNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQY 335
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 43/284 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ A A + G C + +A+KV M GV P+E ++ L Y G EK
Sbjct: 113 PDFIAYTAVICGLCR-CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFS 171
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L + M + G + +V Y++L G KLG +++A+ + G G + TY +V
Sbjct: 172 LHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG----LQLNICTYNSLV 227
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G ++GN++ L+ +++E +G+ D ++ A G KAH +L EM
Sbjct: 228 NGLCKSGNIRQAVKLM---EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDR 284
Query: 398 G---------------CSVGL--------------GV------YVPTLKAYCKEHRTAEA 422
G C G+ G+ Y +K YC +
Sbjct: 285 GLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCT 344
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
T++ + + G+ D Y+ LI+ +++ + A+ L ++M E
Sbjct: 345 TEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAE 388
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 17/235 (7%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
K ++ EM G L Y + CK + +A +++ ++ + G+ D Y LI
Sbjct: 28 KVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLI 87
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---D 502
+ + Q+A+ LF +M + RI +Y ++ GL + +M A D+V
Sbjct: 88 DGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGK--MMEA--DKVFNKMFS 143
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
VE + ++I +CK+G +E A +M+ PN TY +L +G Q +
Sbjct: 144 RGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDT 203
Query: 563 VLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
+ HE+ KG++ ++ + L K G + Q V+ +EM+V
Sbjct: 204 ANELLHEM-------CGKGLQLNICTYNSLVNGLCKSG---NIRQAVKLMEEMEV 248
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 176/418 (42%), Gaps = 97/418 (23%)
Query: 198 LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQS--VSDAEKVIETMSVLGVRPN 255
L+VF++ R+ L KPN+ CN L G S ++ A +V + M +GV +
Sbjct: 151 LQVFQKMIRLKL-------KPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLD 203
Query: 256 ESSFGFLAYLYALKG-LQEKIVELESLMNEF----------------------------- 285
+F L Y L+G L++ + LE +++EF
Sbjct: 204 VKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLL 263
Query: 286 ------GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVV 337
G V Y++L+ GY KLG+L+ A + + L M+Q++ + TY ++
Sbjct: 264 LDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL------MKQTNILPDLCTYNILI 317
Query: 338 KGFLQNGNVK-GLANL-IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
G G+++ GL + ++++ KL+P + + +I C LGLS +A ++++M
Sbjct: 318 NGVCNAGSIREGLELMDVMKSLKLQPDVVTYNT-----LIDGCFELGLSLEAKKLMEQME 372
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD-ISSSGLQLDVGNYDALIEASITSQDF 454
G + +LK CKE + E T+ V + + G D+ Y LI+A + D
Sbjct: 373 NDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDL 432
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A + R+M + KG +++ T N+
Sbjct: 433 SGALEMMREMGQ------KG------------------------------IKMNTITLNT 456
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
I+ A CK ++++A L + ++ TY +LI GY E+ MW E+KR
Sbjct: 457 ILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKR 514
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 159/350 (45%), Gaps = 22/350 (6%)
Query: 211 ENLDFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF-LAY 264
E +D MK P++ N ++GC + L +A+K++E M GV+PN+ + L +
Sbjct: 331 ELMDVMKSLKLQPDVVTYNTLIDGC-FELGLSLEAKKLMEQMENDGVKPNQVTHNISLKW 389
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
L + +E +++ L+ GFS +V Y +LI Y+K+G+L S + ++ +G ++
Sbjct: 390 LCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDL-SGALEMMREMGQKGIK 448
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
+ + T ++ + V NL+ A K G +VD +I
Sbjct: 449 MNTITLNT---ILDALCKERKVDEAHNLLDSAHK---RGYIVDEVTYGTLIMGYFREEKV 502
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
+KA + DEM + + + + C +T A + +++ SGL D ++++
Sbjct: 503 EKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSI 562
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLT---IMTGLMENHRPELMAAFLDEVVE 501
I + AF + E+ + K T ++ GL + E F + ++
Sbjct: 563 ILGYCKEGRVEKAFEFYN---ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIT 619
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+ EV T +N++I AFCK +L++A L M + EP+ TY S+I
Sbjct: 620 ER--EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSII 667
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 151/373 (40%), Gaps = 20/373 (5%)
Query: 207 IALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
+ LD + + PN N + G C L S+ +A +++E M + P+ ++ L
Sbjct: 262 LLLDMKRNGLVPNRVTYNNLVYGYC-KLGSLKEAFQIVELMKQTNILPDLCTYNILINGV 320
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG---NM 323
G + +EL +M +V Y++LI G +LG A + + G N
Sbjct: 321 CNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQ 380
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ S + C+ K VK L +E G D +I A + +G
Sbjct: 381 VTHNISLKWLCKEEKREEVTRKVKEL---------VEMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
A ++ EM G + L A CKE + EA L+ G +D Y
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGT 491
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI + + AF ++ +M+ +I ++ +++ GL + + EL DE+ E
Sbjct: 492 LIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV------TA 557
+ +NSII +CK GR+E A I F+P++ T L+NG A
Sbjct: 552 LLPDDC-TFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610
Query: 558 EQYFSVLMMWHEI 570
+F+ L+ E+
Sbjct: 611 LNFFNTLITEREV 623
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 161/363 (44%), Gaps = 20/363 (5%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
ENL + P++ + N + GC +S+A K++E MS GV+PN + + Y +G
Sbjct: 340 ENLKLL-PDVVSYNTLINGC-LEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEG 397
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
+ + M E GFS V Y++LI+GY K GN+ A RT + +G NM+ +
Sbjct: 398 KMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRT-MDEMGRKNMKMDSVTL 456
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHS 389
T +++ + ++ L+ A+K G +D V +G +I G D+A
Sbjct: 457 NT---ILRTLCREKKLEEAYKLLSSARK---RGYFIDE-VSYGTLIVGYFKDGNVDRALK 509
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ DEM Y + C+ +T +A + ++ SGL D Y+ ++
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC 569
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-MENHRPELMAAFLDEVVEDPRVEVK 508
D + AF M E + ++ GL ME + + F V + ++
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTV 629
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT------AEQYFS 562
T +N++I + CK GRL+DA L M + P+ TY ++I AE++ S
Sbjct: 630 T--YNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMS 687
Query: 563 VLM 565
++
Sbjct: 688 KML 690
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 160/413 (38%), Gaps = 84/413 (20%)
Query: 216 MKPNIYACNAALEGCCY--GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
++PN+ CN L SVS + + LG+ PN ++F + Y Y L+ +
Sbjct: 166 LRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFK 225
Query: 274 KIVELESLMNEFGFSSQMVFYSS-----------------------------------LI 298
VE ++M ++ S V Y++ L+
Sbjct: 226 DAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEA 356
GY K+G L+ A+ I L M Q++ + TY ++ G G ++ L E
Sbjct: 286 YGYCKMGWLKEAANVIEL------MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM 339
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+ L+ VV + +I+ C+ +A +L+EM+ G + +K YCKE
Sbjct: 340 ENLKLLPDVVSYNT---LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKE 396
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM------------ 464
+ +A+ + + SG D Y+ LI + + AF +M
Sbjct: 397 GKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTL 456
Query: 465 --------REARI---YDL------KG------SYLTIMTGLMENHRPELMAAFLDEVVE 501
RE ++ Y L +G SY T++ G ++ + DE+ E
Sbjct: 457 NTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE 516
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ T +N II C+ G+ E A L ++ P++ TY ++++GY
Sbjct: 517 KEIIP-STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGY 568
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/570 (20%), Positives = 223/570 (39%), Gaps = 41/570 (7%)
Query: 63 LTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNL 122
LT + L+T + + + A++ FK + L P+ N+L+ L +H++
Sbjct: 130 LTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSV 189
Query: 123 ---KRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFEL 179
+ AF + K + + T + ++ N A + M K
Sbjct: 190 SFSREAFNDAI----KLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVT 245
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD 239
+ L +C+K + + +D + PN N + G C + + +
Sbjct: 246 YNTILDTLCKKGR--------LGDARDLLMDMKSRGLLPNRNTYNILVYGYC-KMGWLKE 296
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A VIE M+ + P+ ++ L +G E+ +L M +V Y++LI+
Sbjct: 297 AANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLIN 356
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
G ++ + A + + M + T+ +VK + + G + +N I
Sbjct: 357 GCLEWSKISEAFKLL------EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI---T 407
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
K+E SG D +I+ G +A +DEM + L+ C+E
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+ EA +L+ G +D +Y LI + A L+ +M+E I +Y
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
I+ GL + + E + L+E++E + +T +N+I+H +C+ G +E A + +M+
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDET-TYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 538 LQFEPNDQTYLSLINGYV---TAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY 594
F+P+ T L+ G E+ + W KG + + +
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWV----------SKGKAIDTVTYNTLIT 636
Query: 595 ALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+L K G D ++ + +E ++ D + Y
Sbjct: 637 SLCKEGRLDDAFNLLSEMEEKELGPDHYTY 666
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 135/350 (38%), Gaps = 27/350 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
MK + N L C + + +A K++ + G +E S+G L Y G ++
Sbjct: 449 MKMDSVTLNTILRTLCRE-KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRA 507
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++L M E V Y+ +I G + G E A + L G + + TY
Sbjct: 508 LKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPD----ETTYNT 563
Query: 336 VVKGFLQNGNVKG---LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ G+ + G+V+ N ++E +P + + C+ G+ +KA + +
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVE-NSFKPDVFTCN----ILLRGLCME-GVLEKALKLFN 617
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+ G ++ Y + + CKE R +A L+ ++ L D Y+A+I A S
Sbjct: 618 TWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSG 677
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A M E KG+ + L +N + E V +W
Sbjct: 678 RIREAEEFMSKMLE------KGNLPDQVLQLDKNE----TVVTSETSEESDSSSVAYSEW 727
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
I C G+ +DA R + TY++L++G + + S
Sbjct: 728 ---IKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSIS 774
>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g22960, mitochondrial; Flags: Precursor
gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 718
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 169/370 (45%), Gaps = 36/370 (9%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
NIY C AL C +G + DA +++ +M+ P+ S+ L + Y G K VE
Sbjct: 347 NIYIC--AL--CDFG--RIDDARELLSSMAA----PDVVSYNTLMHGYIKMG---KFVEA 393
Query: 279 ESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-TYC 334
L ++ +V Y++LI G + GNLE A R L Q F TY
Sbjct: 394 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR-----LKEEMTTQLIFPDVITYT 448
Query: 335 EVVKGFLQNGNVKGLANLIIEAQK--LEPSGIV-VDRSVGFGIISACVNLGLSDKAHSIL 391
+VKGF++NGN+ + E + ++P G R+VG + LG SDKA +
Sbjct: 449 TLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVG------ELRLGDSDKAFRLH 502
Query: 392 DEMNACGCSV-GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+EM A L +Y + CK +A + I GL D Y +I +
Sbjct: 503 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 562
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKT 509
+ F+ A +L+ +M R+Y +Y ++ G + R E + E+ + R V T
Sbjct: 563 NGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 622
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
H N++++ CKAG +++A R L +M PN +Y LI+ E++ V+ ++ E
Sbjct: 623 H--NALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKE 680
Query: 570 -IKRKISTDG 578
+ ++I DG
Sbjct: 681 MLDKEIEPDG 690
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 107/501 (21%), Positives = 188/501 (37%), Gaps = 88/501 (17%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ CN L+ + ++ A V ETM G+ P +F + G E++ +
Sbjct: 201 PSVRNCNIVLK-VLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDK 259
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC--E 335
+ M V Y+ LI+G+ K G +E A R G+M +S F+ Y
Sbjct: 260 IWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF------HGDMRRSGFAVTPYSFNP 313
Query: 336 VVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+++G+ + G + G+ + ++ A GI S I A + G D A +L
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNA------GIYPTTSTYNIYICALCDFGRIDDARELLS 367
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M A Y + Y K + EA+ L D+ + + + Y+ LI+ S
Sbjct: 368 SMAAPDVVS----YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG 423
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE----------- 501
+ + A L +M I+ +Y T++ G ++N + DE++
Sbjct: 424 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 483
Query: 502 ----------DPRVEVKTHD--------------WNSIIHAFCKAGRLEDAKRTLRRMIF 537
D + H+ +N I CK G L A R++
Sbjct: 484 TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 543
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK------------------------ 573
+ P+ TY ++I GY+ Q+ ++ E+ RK
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQ 603
Query: 574 ---ISTDGQK-GIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFM 629
ST+ +K G++ +A LY + K G D + + K +E + +K+ Y
Sbjct: 604 AFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663
Query: 630 EN---HKKLKVAKLRKRNFKK 647
+N K +V KL K K
Sbjct: 664 KNCDFEKWEEVVKLYKEMLDK 684
>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
Length = 1152
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 169/370 (45%), Gaps = 36/370 (9%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
NIY C AL C +G + DA +++ +M+ P+ S+ L + Y G K VE
Sbjct: 384 NIYIC--AL--CDFG--RIDDARELLSSMAA----PDVVSYNTLMHGYIKMG---KFVEA 430
Query: 279 ESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-TYC 334
L ++ +V Y++LI G + GNLE A R L Q F TY
Sbjct: 431 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR-----LKEEMTTQLIFPDVITYT 485
Query: 335 EVVKGFLQNGNVKGLANLIIEAQK--LEPSGIV-VDRSVGFGIISACVNLGLSDKAHSIL 391
+VKGF++NGN+ + E + ++P G R+VG + LG SDKA +
Sbjct: 486 TLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVG------ELRLGDSDKAFRLH 539
Query: 392 DEMNACGCSV-GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+EM A L +Y + CK +A + I GL D Y +I +
Sbjct: 540 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 599
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKT 509
+ F+ A +L+ +M R+Y +Y ++ G + R E + E+ + R V T
Sbjct: 600 NGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 659
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
H N++++ CKAG +++A R L +M PN +Y LI+ E++ V+ ++ E
Sbjct: 660 H--NALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKE 717
Query: 570 -IKRKISTDG 578
+ ++I DG
Sbjct: 718 MLDKEIEPDG 727
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 107/501 (21%), Positives = 188/501 (37%), Gaps = 88/501 (17%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ CN L+ + ++ A V ETM G+ P +F + G E++ +
Sbjct: 238 PSVRNCNIVLK-VLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDK 296
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC--E 335
+ M V Y+ LI+G+ K G +E A R G+M +S F+ Y
Sbjct: 297 IWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF------HGDMRRSGFAVTPYSFNP 350
Query: 336 VVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+++G+ + G + G+ + ++ A GI S I A + G D A +L
Sbjct: 351 LIEGYCKQGLFDDAWGVTDEMLNA------GIYPTTSTYNIYICALCDFGRIDDARELLS 404
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M A Y + Y K + EA+ L D+ + + + Y+ LI+ S
Sbjct: 405 SMAAPDVVS----YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG 460
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE----------- 501
+ + A L +M I+ +Y T++ G ++N + DE++
Sbjct: 461 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 520
Query: 502 ----------DPRVEVKTHD--------------WNSIIHAFCKAGRLEDAKRTLRRMIF 537
D + H+ +N I CK G L A R++
Sbjct: 521 TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 580
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK------------------------ 573
+ P+ TY ++I GY+ Q+ ++ E+ RK
Sbjct: 581 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQ 640
Query: 574 ---ISTDGQK-GIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFM 629
ST+ +K G++ +A LY + K G D + + K +E + +K+ Y
Sbjct: 641 AFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 700
Query: 630 EN---HKKLKVAKLRKRNFKK 647
+N K +V KL K K
Sbjct: 701 KNCDFEKWEEVVKLYKEMLDK 721
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 163/368 (44%), Gaps = 28/368 (7%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ ++ + G C G V DA ++ M +G RP+ + + GL V
Sbjct: 77 EPDVVTVSSLINGFCQG-NRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 135
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
EL M G + V Y+SL++G G A+R + +M D T+
Sbjct: 136 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM------RDMVMRDIVPNVITFT 189
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKL--EPSGIVVDRSVGF--GIISACVNLGLSDKAHSI 390
V+ F++ G EA KL E + VD V +I+ G D+A +
Sbjct: 190 AVIDVFVKEGKFS-------EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 242
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
LD M GC + Y + +CK R E T+L +++ GL D Y+ +I+
Sbjct: 243 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 302
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ +A +F M ++R +++ +Y ++ GL N R E A L E ++ +E+
Sbjct: 303 AGRPDAAQEIFSRM-DSR-PNIR-TYSILLYGLCMNWRVE-KALVLFENMQKSEIELDIT 358
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+N +IH CK G +EDA R + +P+ +Y ++I+G+ Q+ +++
Sbjct: 359 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY--- 415
Query: 571 KRKISTDG 578
RK+ DG
Sbjct: 416 -RKMQEDG 422
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 1/189 (0%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D S+ M CG L Y + C+ R A +V + G + DV +L
Sbjct: 27 DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 86
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I A L M E Y TI+ G + D + D
Sbjct: 87 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG- 145
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
V +NS++ C +GR DA R +R M+ PN T+ ++I+ +V ++ +
Sbjct: 146 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 205
Query: 565 MMWHEIKRK 573
++ E+ R+
Sbjct: 206 KLYEEMTRR 214
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 161/353 (45%), Gaps = 27/353 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P++ N ++ C Q+ + A ++E MS V P+E++F L + +G E
Sbjct: 192 IEPDVVTFNTVIDALCRARQART-AVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAA 250
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF---SKET 332
+ L++ M+E G S V + LI+GY KLG + A LG E +D + T
Sbjct: 251 LRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDA-------LGYIQQEIADGFEPDRVT 303
Query: 333 YCEVVKGFLQNGNVK-GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+ V G QNG+V L L + Q+ G D +I+ N G ++A I+
Sbjct: 304 FSTFVNGLCQNGHVDHALKVLGLMLQE----GCEPDVYTYSTVINCLCNNGELEEAKGIV 359
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++M GC + + A C E++ EA L +++ GL +V ++ LI A
Sbjct: 360 NQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKV 419
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD-----EVVEDPRVE 506
D A LF +M+ + + +Y ++ L + + +A LD EV P+
Sbjct: 420 GDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGK---LAKALDLLKEMEVSGCPQ-- 474
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
T +N+II CK R+E+A+ +M N T+ +LI+G AE+
Sbjct: 475 -STVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAER 526
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 137/389 (35%), Gaps = 64/389 (16%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T T++ + N A +V M + + +V +C +N
Sbjct: 335 DVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQ-------- 386
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD---AEKVIETMSVLGVRPNES 257
EE +A + + + PN+Y N + C V D A ++ E M G P+E
Sbjct: 387 LEEALDLARELTVKGLSPNVYTFNILINALC----KVGDPHLAVRLFEEMKSSGCTPDEV 442
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
++ L G K ++L M G V Y+++I G K +E A
Sbjct: 443 TYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVF--- 499
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
+Q D V G+ I L I
Sbjct: 500 ------DQMD------------------VTGIGRNAITFNTL---------------IDG 520
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
N D A ++D+M + G Y L YCK+ ++A ++ ++++G ++D
Sbjct: 521 LCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVD 580
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME-NHRPELMAAF- 495
V Y LI ++ Q+A L R MR + +Y ++ L N+ + ++ F
Sbjct: 581 VVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFR 640
Query: 496 -LDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
+ EV P + + C+ G
Sbjct: 641 EMTEVGGPP----DAFTYKIVFRGLCRGG 665
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 113/274 (41%), Gaps = 17/274 (6%)
Query: 82 NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLD 141
N +EA + LT L P+ N LI L + D H R F ++ + D
Sbjct: 385 NQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEE----MKSSGCTPD 440
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
T + L+ ++ ++ A A L+K M + + + +C++ +
Sbjct: 441 EVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKR--------RRI 492
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
EE + ++ + N N ++G C + + DA ++++ M G++PN ++
Sbjct: 493 EEAEEVFDQMDVTGIGRNAITFNTLIDGLCNA-ERIDDAAELVDQMISEGLQPNNVTYNS 551
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+ Y +G K ++ M GF +V Y++LI+G K ++A L L G
Sbjct: 552 ILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAA----LKLLRGM 607
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
M+ + + Y V++ + N + +L E
Sbjct: 608 RMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFRE 641
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 86/225 (38%), Gaps = 44/225 (19%)
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
S EM++ G + + + A C+ + A ++ ++SS + D + L+E
Sbjct: 181 ESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEG 240
Query: 448 SITSQDFQSAFSLFRDMRE--------------------ARIYDLKG------------- 474
+ ++A L M E R+ D G
Sbjct: 241 FVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPD 300
Query: 475 --SYLTIMTGLMEN----HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
++ T + GL +N H +++ L E E P V + ++++I+ C G LE+A
Sbjct: 301 RVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCE-PDV----YTYSTVINCLCNNGELEEA 355
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
K + +M+ P+ T+ +LI T Q L + E+ K
Sbjct: 356 KGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVK 400
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 158/397 (39%), Gaps = 46/397 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP + NA + G C VSDA +I+ M G +PNE ++G + + G +
Sbjct: 174 KPTLITLNALVNGLCLN-GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
EL M E V YS +I G K G+L++A ME F + Y
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF------NEMEIKGFKADIIIYT 286
Query: 335 EVVKGFLQNGNVKGLANLIIE--AQKLEPS------------------------------ 362
+++GF G A L+ + +K+ P
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR 346
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
GI D +I DKA+ +LD M + GC + + + YCK + +
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+L +S G+ D Y+ LI+ + A LF++M R+ SY ++ G
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
L +N PE A + E +E ++E+ +N IIH C A +++DA + +P
Sbjct: 467 LCDNGEPE-KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQ 579
+ +TY +I G +++ RK+ DG
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLF----RKMEEDGH 558
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 143/362 (39%), Gaps = 52/362 (14%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+Y + + CC + +S A + + LG P+ +F L L+G + +EL
Sbjct: 106 NLYTLSIMINCCCR-CRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALEL 164
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEV 336
M E G ++ ++L++G G + A I M ++ F ++ TY V
Sbjct: 165 VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI------DRMVETGFQPNEVTYGPV 218
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+K ++G L+ +K+E I +D II G D A ++ +EM
Sbjct: 219 LKVMCKSGQTALAMELL---RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + +Y ++ +C R + +L+ D+ + DV + ALI+ + +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A L ++M + I P+ T + S+I
Sbjct: 336 AEELHKEMIQRGI------------------SPD------------------TVTYTSLI 359
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
FCK +L+ A L M+ PN +T+ LINGY A L E+ RK+S
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL----ELFRKMSL 415
Query: 577 DG 578
G
Sbjct: 416 RG 417
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 147/372 (39%), Gaps = 47/372 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
K +I + G CY D K++ M + P+ +F L + +G +
Sbjct: 279 KADIIIYTTLIRGFCYA-GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG---NMEQSDFSKETY 333
EL M + G S V Y+SLI G+ K L+ A+ + L + G N+ + Y
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 334 CEVVKGFLQNG-------NVKGLA------NLII----EAQKLEPSGIV----VDRSVGF 372
C+ + +G +++G+ N +I E KLE + + V R V
Sbjct: 398 CKA--NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 373 GIISACVNL-GLSD-----KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
I+S + L GL D KA I +++ + +G+Y + C + +A L
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ G++ DV Y+ +I A LFR M E + G I L+
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG-HSPNGCTYNI---LIRA 571
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
H E A +++E E+K ++ A L A TL RM+ EP+ T
Sbjct: 572 HLGEGDATKSAKLIE----EIKRCGFS------VDASTLRFALSTLARMLKAGHEPDVFT 621
Query: 547 YLSLINGYVTAE 558
+ +L+ + E
Sbjct: 622 FTTLLRPFCLEE 633
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 149/401 (37%), Gaps = 63/401 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ + ++G C Q + A +++ M G PN +F L Y L +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQ-LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+EL M+ G + V Y++LI G+ +LG LE A + Q S+ +
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK----------ELFQEMVSRRVRPD 456
Query: 336 VVK------GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
+V G NG + + +K+E S + +D + II N D A
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIF---EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 390 ILDEMNACGCSVGLGVYVPTLKAY-------CKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+ CS+ L P +K Y CK+ +EA L + G + Y+
Sbjct: 514 LF-------CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL-----TIMTGLMENHRPE------L 491
LI A + D + L +++ + + S L T+ L H P+ L
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCG-FSVDASTLRFALSTLARMLKAGHEPDVFTFTTL 625
Query: 492 MAAFLDE----VVEDPRV---------EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+ F E V + P + + +N++I + L +M
Sbjct: 626 LRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFER 685
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQ 579
+PN T + I+G + + S +++ RK+ D +
Sbjct: 686 GCQPNAVTKSTFISGLCKQDLHGSAILLL----RKMENDNE 722
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 151/356 (42%), Gaps = 10/356 (2%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ N+ + G C + + +A + M +RPN ++G Y+ G E
Sbjct: 484 PDVFCYNSLIIGFCKA-KRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 542
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M G + Y++LI G+ K GN+ A L ++ +TY ++
Sbjct: 543 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDV----QTYSVLI 598
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G +NG + + E Q+ G++ + +IS G DKA +L+EM
Sbjct: 599 HGLSRNGKMHEAFGIFSELQE---KGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIK 655
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + + Y + CK A L DI GL + Y A+++ S++ +A
Sbjct: 656 GINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA 715
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
F L +M + Y I+ + + E E++E + T +N++I
Sbjct: 716 FQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE--KGFASTVSFNTLIE 773
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+CK+G+L++A L MI QF PN TY SLI+ A +W E++ +
Sbjct: 774 GYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 829
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 110/498 (22%), Positives = 194/498 (38%), Gaps = 122/498 (24%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFL--VDICRKNSNFVAFL 198
D + L ++ N+N PA L+KC+ +N P + G + C + N V F
Sbjct: 100 DLDVLSALAVNLCNSNWYGPASDLIKCIIRNSD-SPLAVLGSIVKCYRSCNGSPNSVIFD 158
Query: 199 KVFEECCRIAL----------DENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMS 248
+ + ++ +N +F +P++ +CN+ L G V KV + M
Sbjct: 159 MLMDSYRKMGFLVEAVNVFLGPKNFEF-RPSLLSCNSLLGDLLKG-NKVELFWKVFDGMC 216
Query: 249 VLGVRPNESSFGFLAYLYALKG-----------------LQEKIVELESLMNEFGFSSQM 291
V P+ ++ + + G L ++ +EL+ M + G +
Sbjct: 217 AHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDL 276
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE----TYCEVVKGFLQNGNVK 347
Y LI+G+ +E SR L L +E D + TY ++ GF++ G++
Sbjct: 277 YTYDILINGFC----MEKRSREAKLML----LEMIDVGLKPEPITYNALIDGFMRQGDI- 327
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
++A I DEM ACG L ++
Sbjct: 328 -------------------------------------EQAFRIKDEMVACGIEANLIIWN 350
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
L CK + +A +++ ++ G++ D Y LIE Q+ AF L +M++
Sbjct: 351 TLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 410
Query: 468 RIYDLKGSYLTIMTGL-----------------MENHRPE------LMAAFLDE-VVEDP 503
++ +Y I+ GL M +P LM A E VE+
Sbjct: 411 KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES 470
Query: 504 RVEVKTHD----------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
R+ ++ +NS+I FCKA R+E+A+ L M+ + PN TY + I+G
Sbjct: 471 RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 530
Query: 554 YV------TAEQYFSVLM 565
Y A++YF+ ++
Sbjct: 531 YSKAGEMEIADRYFNEML 548
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 173/404 (42%), Gaps = 42/404 (10%)
Query: 188 CRKNSNFVAFLKVFEECCRIA-LDENLDFMK--------PNIYACNAALEGCCYGLQSVS 238
C +N + + + C+ +++ L+ M+ P+ + +EG C G Q+++
Sbjct: 340 CGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRG-QNMA 398
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-------QEKIVELESLMNEFGFSSQM 291
A ++++ M + P L Y + GL + E +MN G
Sbjct: 399 RAFELLDEMKKRKLAPT-----VLTYSVIINGLCRCGNLQGTNAILREMVMN--GLKPNA 451
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC--EVVKGFLQNGNVKGL 349
V Y++L++ + K G +E SR IL M + + +C ++ GF + ++
Sbjct: 452 VVYTTLMTAHAKEGRVEE-SRMIL-----ERMREQGILPDVFCYNSLIIGFCKAKRMEEA 505
Query: 350 ANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
++E ++L P+ + G I G + A +EM +CG +G+Y
Sbjct: 506 RTYLMEMLERRLRPNA----HTYG-AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYT 560
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
++ +CKE EA + I S + DV Y LI + AF +F +++E
Sbjct: 561 ALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK 620
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKTHDWNSIIHAFCKAGRLE 526
+ +Y ++++G + + + L+E+ ++ ++ T +N +I CKAG +E
Sbjct: 621 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVT--YNILIDGLCKAGEIE 678
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
AK + PN TY ++++GY ++ + + E+
Sbjct: 679 RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 722
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 36/191 (18%)
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
L D+A + M G L Y + +C E R+ EA +++++ GL+ + Y+
Sbjct: 256 LLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYN 315
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
ALI+ + D + AF RI D E++A
Sbjct: 316 ALIDGFMRQGDIEQAF---------RIKD------------------EMVAC-------- 340
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+E WN++++ CKAG++E A ++ M+ EP+ QTY LI G+ +
Sbjct: 341 -GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMAR 399
Query: 563 VLMMWHEIKRK 573
+ E+K++
Sbjct: 400 AFELLDEMKKR 410
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 13/244 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN A ++G C ++ + A +++E M + GV P+ + + + EK
Sbjct: 692 LTPNCVTYAAMVDGYCKS-KNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKA 750
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETY 333
++L M E GF+S + F ++LI GY K G L+ A+ + M + F + TY
Sbjct: 751 LDLFQEMLEKGFASTVSF-NTLIEGYCKSGKLQEANHLL------EEMIEKQFIPNHVTY 803
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ + G + L +E Q+ ++ ++ N+G + ++ +E
Sbjct: 804 TSLIDHNCKAGMMGEAKRLWLEMQE---RNVMPTAKTYTSLLHGYHNIGNMSEVSALFEE 860
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M A G Y + AYC+E EA +L +I G+ + G L S+ ++
Sbjct: 861 MVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARG 920
Query: 454 FQSA 457
FQ A
Sbjct: 921 FQIA 924
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 9/336 (2%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN NA + C G S A K+ M G N ++ + L G EK +
Sbjct: 413 PNTVTYNALINELCVG-GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 471
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M + G +V Y++LI+GY+ GN+ +A+R LL L N + D + TY E+V
Sbjct: 472 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR--LLDLMKENGCEPD--EWTYNELV 527
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
GF + G ++ + Q++ G+ + +I G D A S+L+ M
Sbjct: 528 SGFSKWGKLESAS---FYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM 584
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC+ + Y + KE+R +EA ++ ++ GL +V Y LI+ + Q A
Sbjct: 585 GCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFA 644
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
F +F DM + + +Y +++ GL + + + L E +E + + S+I
Sbjct: 645 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKE-MERKGLAPDEVTFTSLID 703
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
F GR++ A LRRM+ + +PN +TY L+ G
Sbjct: 704 GFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKG 739
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 168/439 (38%), Gaps = 71/439 (16%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N N ++G C G + A + E M +G P ++ L Y KG L
Sbjct: 449 NTQTYNEIIKGLCLG-GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARL 507
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS---RTILLCLGGGNMEQSDF------- 328
LM E G Y+ L+SG+ K G LESAS + ++ C G N +
Sbjct: 508 LDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC--GLNPNPVSYTTLIDGH 565
Query: 329 SKETYCEVVKGFLQ--------------NGNVKGLA--NLIIEAQK----LEPSGIVVDR 368
SK+ ++ L+ N + GL+ N EA+K + G++ +
Sbjct: 566 SKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNV 625
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+I G + A I +M C L Y + C+E + EA L+ +
Sbjct: 626 ITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKE 685
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN-- 486
+ GL D + +LI+ + AF L R M + +Y ++ GL +
Sbjct: 686 MERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECL 745
Query: 487 ------------------HRPEL-------MAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
H ++ + A + E+ +P ++ +++++ C+
Sbjct: 746 LLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDT----YSTLVSGLCR 801
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKG 581
GR +A++ ++ M F P+ + Y SL+ + + L ++H I+ KG
Sbjct: 802 KGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIE-------AKG 854
Query: 582 IKFEHNLVDAFLYALVKGG 600
+ ++ A + AL K G
Sbjct: 855 FQLHLSIYRALICALCKAG 873
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 135/338 (39%), Gaps = 30/338 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ ++G C ++ A K+ M PN ++ L Y +G ++
Sbjct: 623 PNVITYTTLIDGLCRNGRT-QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEI 681
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M G + V ++SLI G+V LG ++ A + + G + TY ++
Sbjct: 682 LLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVG----CKPNYRTYSVLL 737
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVV----DRSVGFGIISACVNLGLSDKAHSILDE 393
KG + L+ E ++ + ++ V F I+S ++L
Sbjct: 738 KGLQKE------CLLLEEKVAVQHEAVYSFSPHEKDVNFEIVS------------NLLAR 779
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M+ GC L Y + C++ R EA QLV D+ G D Y +L+ A + +
Sbjct: 780 MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLE 839
Query: 454 FQSAFSLFRDMREARIYDLKGS-YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
A +F + EA+ + L S Y ++ L + + E A D ++E W
Sbjct: 840 VDHALKIFHSI-EAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEK-EWNADEIVW 897
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
++ K G L+ + L M F PN QTY+ L
Sbjct: 898 TVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 101/495 (20%), Positives = 194/495 (39%), Gaps = 80/495 (16%)
Query: 91 FKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLG 150
+K + + + PS N+LI LS + S ++ + +P + + ++ +LG
Sbjct: 228 YKQMLNSGIQPSLLTFNTLINILSK-KGKVREAELILSQIFQYDLSPDVFTYTSL--ILG 284
Query: 151 SMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIA-L 209
RN N AF + M K + C NS V + + C +
Sbjct: 285 HCRNRNLDL-AFGVFDRMVK---------------EGCDPNS--VTYSTLINGLCNEGRV 326
Query: 210 DENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
DE LD ++ P +Y + C ++ +A +++ M G RPN ++
Sbjct: 327 DEALDMLEEMIEKGIEPTVYTYTLPITALCA-IEHEEEAIELVARMKKRGCRPNVQTYTA 385
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L + G E + L M + G V Y++LI+ G +A + G G
Sbjct: 386 LISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 445
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
++ + +TY E++KG G+++ L + K+ P VV + +I+ +
Sbjct: 446 SLANT----QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT---LINGYLTK 498
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G + A +LD M GC + D Y
Sbjct: 499 GNVNNAARLLDLMKENGC-----------------------------------EPDEWTY 523
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ L+ +SA F++M E + SY T++ G ++ + ++ + L+ + E
Sbjct: 524 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEE 583
Query: 502 ---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+P VE +N++I+ K R +A++ +M PN TY +LI+G
Sbjct: 584 MGCNPNVE----SYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNG 639
Query: 559 QYFSVLMMWHEIKRK 573
+ ++H+++++
Sbjct: 640 RTQFAFKIFHDMEKR 654
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 162/405 (40%), Gaps = 52/405 (12%)
Query: 168 MFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKP--------N 219
+ ++R F P + ++ CR EE R+A DF+ +
Sbjct: 160 LVRDRVFAPADHIRILMIKACRNE----------EEIRRVA-----DFLNEISGMGFGFS 204
Query: 220 IYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELE 279
+Y+CN L + V A + + M G++P+ +F L + + KG K+ E E
Sbjct: 205 LYSCNTLLIQLA-KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG---KVREAE 260
Query: 280 SLMNE---FGFSSQMVFYSSLISGYVKLGNLESA----SRTILLCLGGGNMEQSDFSKET 332
++++ + S + Y+SLI G+ + NL+ A R + E D + T
Sbjct: 261 LILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV--------KEGCDPNSVT 312
Query: 333 YCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
Y ++ G G V +++ E + +EP+ I+A + ++A +
Sbjct: 313 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP-----ITALCAIEHEEEAIEL 367
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+ M GC + Y + + + A L + GL + Y+ALI
Sbjct: 368 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 427
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-DPRVEVKT 509
F +A +F M +Y I+ GL E +++++ P V T
Sbjct: 428 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 487
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N++I+ + G + +A R L M EP++ TY L++G+
Sbjct: 488 --YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF 530
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 142/368 (38%), Gaps = 46/368 (12%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKIVELESL---MNEFGFSSQM 291
V A ++E M +G PN S+ + + GL + + E E + M E G +
Sbjct: 571 VDIALSLLERMEEMGCNPNVESYNAV-----INGLSKENRFSEAEKICDKMAEQGLLPNV 625
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGL 349
+ Y++LI G + G + A + +ME+ TY ++ G Q G
Sbjct: 626 ITYTTLIDGLCRNGRTQFAFKIF------HDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 679
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
L+ +++E G+ D +I V LG D A +L M GC Y
Sbjct: 680 EILL---KEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVL 736
Query: 410 LKAYCKEHRTAE------------------------ATQLVMDISSSGLQLDVGNYDALI 445
LK KE E + L+ +S G + + Y L+
Sbjct: 737 LKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLV 796
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
F A L +DM+E + Y +++ +N + A + +E
Sbjct: 797 SGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVD-HALKIFHSIEAKGF 855
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
++ + ++I A CKAG++E+A+ M+ ++ ++ + L++G + + +
Sbjct: 856 QLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMK 915
Query: 566 MWHEIKRK 573
+ H ++ K
Sbjct: 916 LLHIMESK 923
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 162/356 (45%), Gaps = 10/356 (2%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ N+ ++G + + +AE+ + G+ P+E ++ L + Y EK +
Sbjct: 523 PDLFCYNSLIKGLST-VGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQ 581
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M G Y+ L+ GY K + E S + LG G+ + Y V+
Sbjct: 582 LLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDN----HIYGIVI 637
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+ ++ N++ ++ E +K +G+V D + +IS + +KA +LDEM
Sbjct: 638 RNLSRSENMEVAFMVLTEVEK---NGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKE 694
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G G+ Y + +C+ + A + I + GL + Y ALI+ + + D A
Sbjct: 695 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDA 754
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
F L++DM + I Y + TG + E A FL E + + R +++++
Sbjct: 755 FDLYKDMLDRGIAPDAFVYNVLATGCSDAADLE-QALFLTEEMFN-RGYAHVSLFSTLVR 812
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
FCK GRL++ ++ L M+ + PN QT ++I + A + ++ E+++K
Sbjct: 813 GFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQK 868
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 158/356 (44%), Gaps = 47/356 (13%)
Query: 210 DENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL 268
+E +D+ + P+ + A + G C G + +A+ +++ MS G++PN + L +
Sbjct: 304 EEMVDYGLSPDAFTYGALMNGLCKG-GRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMK 362
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
+G + ++ + M G + Y +LI G K+G L AS+ + + G+ +
Sbjct: 363 EGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDT-- 420
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR-SVGFGIISACVNLGLSDKA 387
TY +++G Q+ + G L+ E + SGI+ + + G I C N G S +A
Sbjct: 421 --FTYHPLMQGHFQHYDKDGAFELLNEMRN---SGILPNAYTYGIMINGLCQN-GESKEA 474
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
++L+EM + G +Y P + + KE + A + + +++ + + D+ Y++LI+
Sbjct: 475 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKG 534
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
T + A + +++ GL+ DE
Sbjct: 535 LSTVGRIEEAEEYYAQVQK--------------RGLVP-----------DEFT------- 562
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
++ +IH +CK LE A + L++M+ +PN TY L+ GY + + V
Sbjct: 563 ----YSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKV 614
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 144/365 (39%), Gaps = 43/365 (11%)
Query: 236 SVSDAEKVIETMSVLGVRPNESSF-GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
SV A +V+ M LG+ P G L L + E + +L+ M G + Y
Sbjct: 190 SVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAM-ELVWKLKGFMEGAGIPPDVYTY 248
Query: 295 SSLISGYVKLGNLESASRTIL--------------------LCLGGGNMEQSDFSKE--- 331
S+ + + K + ++A + LC G E F +E
Sbjct: 249 STFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVD 308
Query: 332 --------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
TY ++ G + G +K L+ E + SG+ + V ++ + G
Sbjct: 309 YGLSPDAFTYGALMNGLCKGGRLKEAKALLDE---MSCSGLKPNVVVYATLVDGFMKEGK 365
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
+ +A IL+EM + G +Y ++ CK + A++L+ ++ G + D Y
Sbjct: 366 AAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHP 425
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
L++ D AF L +MR + I +Y ++ GL +N + L+E++ +
Sbjct: 426 LMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISE- 484
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT------A 557
++ + +I K G + A +L M P+ Y SLI G T A
Sbjct: 485 GLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEA 544
Query: 558 EQYFS 562
E+Y++
Sbjct: 545 EEYYA 549
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 171/398 (42%), Gaps = 21/398 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ N ++ C Q + A ++E M G+ P+E +F + Y +G +
Sbjct: 185 IKPDVSTFNVLIKALCRAHQ-LRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD--FSKE-T 332
+ + M EFG S V + ++ G+ K G +E A I M D F + T
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI------QEMSNQDGFFPDQYT 297
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+ +V G + G+VK ++ + G D +IS LG +A LD
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIM---DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLD 354
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M CS Y + CKE++ EAT+L ++S G+ DV +++LI+ ++
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ + A LF +MR + +Y ++ L + + L + +E +
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ-MELSGCARSVITY 473
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
N++I FCKA ++ +A+ M N TY +LI+G + + ++
Sbjct: 474 NTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA----SQLMD 529
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
++ +GQK KF +N + L +GG +V+
Sbjct: 530 QMIMEGQKPDKFTYN---SLLTHFCRGGDIKKAADIVQ 564
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 120/292 (41%), Gaps = 22/292 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N+ ++G C ++ A ++ E M G P+E ++ L KG ++ +
Sbjct: 398 PDVCTFNSLIQGLCL-TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M G + ++ Y++LI G+ K + A ME S+ TY
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIF------DEMEVHGVSRNSVTYNT 510
Query: 336 VVKGFLQNGNVKGLANL----IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ G ++ V+ + L I+E QK D+ +++ G KA I+
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQK-------PDKFTYNSLLTHFCRGGDIKKAADIV 563
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
M + GC + Y + CK R A++L+ I G+ L Y+ +I+
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRK 623
Query: 452 QDFQSAFSLFRDMREARIYDLKG-SYLTIMTGLMENHRPELMAA-FLDEVVE 501
+ A +LFR+M E SY + GL P A FL E++E
Sbjct: 624 RKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G++ DV ++ LI+A + + A + DM + + ++ TIM G +E +
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ-FEPNDQTYLSLI 551
+++VE N I+H FCK GR+EDA ++ M F P+ T+ +L+
Sbjct: 244 LRIREQMVEFG-CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 552 NGYVTA 557
NG A
Sbjct: 303 NGLCKA 308
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 131/390 (33%), Gaps = 47/390 (12%)
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
E + L E D P++Y N+ + G C L V +A + ++ M PN ++ L
Sbjct: 316 EIMDVMLQEGYD---PDVYTYNSVISGLC-KLGEVKEAVEFLDQMITRDCSPNTVTYNTL 371
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ E+ EL ++ G + ++SLI G N A G
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG- 430
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
E +F TY ++ G + N++ +++E SG +I
Sbjct: 431 CEPDEF---TYNMLIDSLCSKGKLDEALNML---KQMELSGCARSVITYNTLIDGFCKAN 484
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL----------------- 425
+A I DEM G S Y + CK R +A+QL
Sbjct: 485 KIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYN 544
Query: 426 ------------------VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
V ++S+G + D+ Y LI + + A L R ++
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK-AGRLE 526
I +Y ++ GL + E++E + + C G +
Sbjct: 605 GIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIR 664
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+A L ++ F P + L G +T
Sbjct: 665 EAVDFLVELLEKGFVPEFSSLYMLAEGLLT 694
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 120/310 (38%), Gaps = 23/310 (7%)
Query: 61 QTLTQD---NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQ 117
Q +T+D N + T + N +EA + + LT+ + P NSLI L L
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL-CLT 413
Query: 118 DNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPF 177
NH + + P D T + L+ S+ + A ++K M +
Sbjct: 414 RNHRVAMELFEEMRSKGCEP---DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 178 ELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSV 237
+ + C+ N E I + + + N N ++G C + V
Sbjct: 471 ITYNTLIDGFCKANK--------IREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS-RRV 521
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
DA ++++ M + G +P++ ++ L + G +K ++ M G +V Y +L
Sbjct: 522 EDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL---II 354
ISG K G +E AS+ L M+ + Y V++G + NL ++
Sbjct: 582 ISGLCKAGRVEVASKL----LRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Query: 355 EAQKLEPSGI 364
E + P +
Sbjct: 638 EQNEAAPDAV 647
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 113/542 (20%), Positives = 216/542 (39%), Gaps = 41/542 (7%)
Query: 57 QQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL 116
++ +++ N+ + T +H D A+K F+ + N P+ N+L LS L
Sbjct: 185 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL---LSGL 241
Query: 117 QDNHNLKRAFASVVYVIEKN--PKLLDFQTVHTLLGSMRNANTAAPAF---ALVKC---M 168
N + A+ + + E+ P + T+ L + A F + C +
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 301
Query: 169 FKNRYFMPFELWGGFLVDIC------RKNS---NFVAFLKVFEECCR----IALDENLDF 215
+ G L + C R+NS + V F + + C+ + L+
Sbjct: 302 VAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 361
Query: 216 MK-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
M+ PN+ ++ ++G C Q V DA++V + M V G+ PN ++ L + + +
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQ-VRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 420
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
+ + L M G ++ Y++LI G K G A+R G+M+ +
Sbjct: 421 GVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF------GDMKAKFCNP 474
Query: 331 E--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
+ TY ++ GF + + L + K ++ D ++ N GL D A
Sbjct: 475 DVITYSCLIGGFCKLERIDMARTLFDDMLK---QAVLPDVVTFSTLVEGYCNAGLVDDAE 531
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+L+EM A CS + Y + +CK R EA +++ ++ G Q +V Y ALI+A
Sbjct: 532 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 591
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ A+ L +M + +Y +++ G E L+ + D +
Sbjct: 592 CRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKAD 651
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+ ++ C+ GR+ A L + P Y++LI G ++ + +
Sbjct: 652 MFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLE 711
Query: 569 EI 570
E+
Sbjct: 712 EM 713
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 12/279 (4%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLAN 351
Y+ LI+G+ K+ + A +LL M++S + TY V+ GF + V
Sbjct: 164 YNVLINGFCKVHKVHRAY--LLL----KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYK 217
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
L +++ +G + + ++S GL D+A+ +LDEM G Y +
Sbjct: 218 LF---RQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMA 274
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
CK + A ++ D S+ DV Y LI + A LF MRE
Sbjct: 275 GLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEP 334
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
++ +M GL + R + L E +ED ++S+I CK G++ DA+
Sbjct: 335 DVVTFTALMDGLCKGDRLQEAQQVL-ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 393
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+RMI EPN TY SLI+G+ S L++ E+
Sbjct: 394 FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 432
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 33/334 (9%)
Query: 240 AEKVIETMSVL------GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
A ++ ET +L G+ PN ++ + G +K EL M E G
Sbjct: 37 ARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAI 96
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE---VVKGFLQNGNVKGLA 350
Y+ +I K N A D+ + CE + + +G K A
Sbjct: 97 YNFVIHALCKARNTAKAL---------------DYFRSMECEKNVITWTIMIDGLCK--A 139
Query: 351 NLIIEAQ----KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
N + EA K++ G V + +I+ + +A+ +L EM G + + Y
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ +C++ + A +L + +G ++ Y+ L+ + A+ L +MRE
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 259
Query: 467 ARIYDLKGSYLTIMTGLMENHRPEL-MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+ K SY T+M GL + + ++ + F D D +V ++++I CKAGRL
Sbjct: 260 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA--YSTLIAGLCKAGRL 317
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
++A + +M EP+ T+ +L++G ++
Sbjct: 318 DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDR 351
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 63/167 (37%), Gaps = 4/167 (2%)
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y +A + R E ++ + G+ +V Y +I+ S D A L +M
Sbjct: 26 TYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEM 85
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
RE+ Y ++ L + A LD E W +I CKA R
Sbjct: 86 RESGPVPDAAIYNFVIHALCKARN---TAKALD-YFRSMECEKNVITWTIMIDGLCKANR 141
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
L +A +M PN+ TY LING+ + ++ E+K
Sbjct: 142 LPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 188
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 151/356 (42%), Gaps = 10/356 (2%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ N+ + G C + + +A + M +RPN ++G Y+ G E
Sbjct: 493 PDVFCYNSLIIGFCKA-KRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 551
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M G + Y++LI G+ K GN+ A L ++ +TY ++
Sbjct: 552 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDV----QTYSVLI 607
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G +NG + + E Q+ G++ + +IS G DKA +L+EM
Sbjct: 608 HGLSRNGKMHEAFGIFSELQE---KGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIK 664
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + + Y + CK A L DI GL + Y A+++ S++ +A
Sbjct: 665 GINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA 724
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
F L +M + Y I+ + + E E++E + T +N++I
Sbjct: 725 FQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE--KGFASTVSFNTLIE 782
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+CK+G+L++A L MI QF PN TY SLI+ A +W E++ +
Sbjct: 783 GYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 838
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 175/440 (39%), Gaps = 98/440 (22%)
Query: 170 KNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEG 229
KN F P L L+ K + F KVF+ C + P++Y +
Sbjct: 172 KNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKV-------LPDVYTYTNMISA 224
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
C + +V DA++V+ M G PN ++ + L ++ +EL+ M + G
Sbjct: 225 HCK-VGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVP 283
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE----TYCEVVKGFLQNGN 345
+ Y LI+G+ +E SR L L +E D + TY ++ GF++ G+
Sbjct: 284 DLYTYDILINGFC----MEKRSREAKLML----LEMIDVGLKPEPITYNALIDGFMRQGD 335
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
+ ++A I DEM ACG L +
Sbjct: 336 I--------------------------------------EQAFRIKDEMVACGIEANLII 357
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
+ L CK + +A +++ ++ G++ D Y LIE Q+ AF L +M+
Sbjct: 358 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 417
Query: 466 EARIYDLKGSYLTIMTGL-----------------MENHRPE------LMAAFLDE-VVE 501
+ ++ +Y I+ GL M +P LM A E VE
Sbjct: 418 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 477
Query: 502 DPRVEVKTHD----------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+ R+ ++ +NS+I FCKA R+E+A+ L M+ + PN TY + I
Sbjct: 478 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 537
Query: 552 NGYV------TAEQYFSVLM 565
+GY A++YF+ ++
Sbjct: 538 DGYSKAGEMEIADRYFNEML 557
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 173/404 (42%), Gaps = 42/404 (10%)
Query: 188 CRKNSNFVAFLKVFEECCRIA-LDENLDFMK--------PNIYACNAALEGCCYGLQSVS 238
C +N + + + C+ +++ L+ M+ P+ + +EG C G Q+++
Sbjct: 349 CGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRG-QNMA 407
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-------QEKIVELESLMNEFGFSSQM 291
A ++++ M + P L Y + GL + E +MN G
Sbjct: 408 RAFELLDEMKKRKLAPT-----VLTYSVIINGLCRCGNLQGTNAILREMVMN--GLKPNA 460
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC--EVVKGFLQNGNVKGL 349
V Y++L++ + K G +E SR IL M + + +C ++ GF + ++
Sbjct: 461 VVYTTLMTAHAKEGRVEE-SRMIL-----ERMREQGILPDVFCYNSLIIGFCKAKRMEEA 514
Query: 350 ANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
++E ++L P+ + G I G + A +EM +CG +G+Y
Sbjct: 515 RTYLMEMLERRLRPNA----HTYG-AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYT 569
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
++ +CKE EA + I S + DV Y LI + AF +F +++E
Sbjct: 570 ALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK 629
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKTHDWNSIIHAFCKAGRLE 526
+ +Y ++++G + + + L+E+ ++ ++ T +N +I CKAG +E
Sbjct: 630 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVT--YNILIDGLCKAGEIE 687
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
AK + PN TY ++++GY ++ + + E+
Sbjct: 688 RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 731
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+ISA +G A +L EM GCS L Y + C+ EA +L + G
Sbjct: 221 MISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKG 280
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
L D+ YD LI + + A + +M + + +Y ++ G M E
Sbjct: 281 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 340
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
DE+V +E WN++++ CKAG++E A ++ M+ EP+ QTY LI G
Sbjct: 341 RIKDEMVA-CGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 399
Query: 554 YVTAEQYFSVLMMWHEIKRK 573
+ + + E+K++
Sbjct: 400 HCRGQNMARAFELLDEMKKR 419
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 13/254 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN A ++G C ++ + A +++E M + GV P+ + + + EK
Sbjct: 701 LTPNCVTYAAMVDGYCKS-KNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKA 759
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETY 333
++L M E GF+S + F ++LI GY K G L+ A+ + M + F + TY
Sbjct: 760 LDLFQEMLEKGFASTVSF-NTLIEGYCKSGKLQEANHLL------EEMIEKQFIPNHVTY 812
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ + G + L +E Q+ ++ ++ N+G + ++ +E
Sbjct: 813 TSLIDHNCKAGMMGEAKRLWLEMQE---RNVMPTAKTYTSLLHGYHNIGNMSEVSALFEE 869
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M A G Y + AYC+E EA +L +I G+ + V YDALI+A ++
Sbjct: 870 MVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEE 929
Query: 454 FQSAFSLFRDMREA 467
F L ++ E+
Sbjct: 930 FFEVLKLLNEIGES 943
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 152/375 (40%), Gaps = 33/375 (8%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTV 145
EA+ F L L P+ NSLI+ S Q N + + + NP D T
Sbjct: 618 EAFGIFSELQEKGLLPNAFTYNSLISG-SCKQGNVDKASQLLEEMCIKGINP---DIVTY 673
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECC 205
+ L+ + A A L + + R P + +VD K+ N A ++ EE
Sbjct: 674 NILIDGLCKAGEIERAKNLFDDI-EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML 732
Query: 206 RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
L + P+ + N L CC + A + + M G + SF L
Sbjct: 733 -------LRGVPPDAFIYNVILNFCCKE-EKFEKALDLFQEMLEKGF-ASTVSFNTLIEG 783
Query: 266 YALKG-LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
Y G LQE LE ++ E F V Y+SLI K G + A R L M+
Sbjct: 784 YCKSGKLQEANHLLEEMI-EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWL------EMQ 836
Query: 325 QSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ + + +TY ++ G+ GN+ ++ L +++ GI D+ + +I A G
Sbjct: 837 ERNVMPTAKTYTSLLHGYHNIGNMSEVSALF---EEMVAKGIEPDKMTYYVMIDAYCREG 893
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+A + DE+ G + + Y ++A CK+ E +L+ +I SG +L
Sbjct: 894 NVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRL------ 947
Query: 443 ALIEASITSQDFQSA 457
L S+ ++ FQ A
Sbjct: 948 GLPTCSVIARGFQIA 962
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 178/424 (41%), Gaps = 46/424 (10%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP I N+ L+G C + A++V M V P+ SF L + G E+
Sbjct: 223 LKPGIVTFNSVLKGLCKH-RRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEA 281
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++ M + G + +V +S LI + G ++ A+ + G G + Y
Sbjct: 282 MKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDG----VIYTM 337
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL-----GLSDK---- 386
V+ GF + G++ EA + V D VG G + V GL +
Sbjct: 338 VIGGFCRAGSMS-------EALR------VRDEMVGLGCLPDVVTYNTLLNGLCKQHRLL 384
Query: 387 -AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
A +L+EM G + L + + YC++ +A QL + L+ DV Y++LI
Sbjct: 385 DAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLI 444
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ D A L+ DM I+ +Y ++ E + E FLDE+V +
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNL 504
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
+NSII +C++G ++ ++ L++M+ P+ T+ +LI+GY+ E
Sbjct: 505 P-NIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFN 563
Query: 566 MWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF-----FDAVMQVVEKSQEMKVFVD 620
+++ +++++ DA Y ++ GF + +V +K + D
Sbjct: 564 VFNIMEKEMVQP------------DAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPD 611
Query: 621 KWKY 624
++ Y
Sbjct: 612 RYTY 615
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 195/467 (41%), Gaps = 56/467 (11%)
Query: 128 SVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMP-FELWGGFLVD 186
+V+ +EK D T + L+ + A A ALV M N+ P + L
Sbjct: 178 TVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM-ANKGLKPGIVTFNSVLKG 236
Query: 187 ICRKNSNFVAFLKVFE--ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVI 244
+C K+ F +VF + C +A P++ + N + G C + V +A K
Sbjct: 237 LC-KHRRFDKAKEVFRAMDQCSVA---------PDVRSFNILIGGFCR-VGEVEEAMKFY 285
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
+ M GV P+ SF L L++ +G + M G V Y+ +I G+ +
Sbjct: 286 KEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRA 345
Query: 305 GNLESASRTILLCLGGG-----------------------------NMEQSDFSKE--TY 333
G++ A R +G G M++ + + T+
Sbjct: 346 GSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTF 405
Query: 334 CEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ G+ ++GN + L + Q+L P + + +I G KA+ +
Sbjct: 406 TTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYN-----SLIDGMCRKGDLAKANELW 460
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
D+M+A Y + ++C++ + EA + ++ S G ++ Y+++I+ S
Sbjct: 461 DDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRS 520
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTH 510
+ + + M + I ++ T++ G ++ + AF + ++E V+
Sbjct: 521 GNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEE--NMHGAFNVFNIMEKEMVQPDAV 578
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+N II+ F + G +E+A R ++M EP+ TY+SLING+VTA
Sbjct: 579 TYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTA 625
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 96/238 (40%), Gaps = 43/238 (18%)
Query: 188 CRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETM 247
CR + NF L++F+ L +P++ A N+ ++G C ++ A ++ + M
Sbjct: 413 CR-DGNFEKALQLFDTLLHQRL-------RPDVVAYNSLIDGMCRK-GDLAKANELWDDM 463
Query: 248 SVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL 307
+ PN ++ L + KG E+ M G ++ Y+S+I GY + GN+
Sbjct: 464 HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523
Query: 308 ESASR--------TILLCLGGGNMEQSDFSKE-----------------------TYCEV 336
+ + IL L N + KE TY +
Sbjct: 524 KKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMI 583
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+ GF + GN++ + +K+ SGI DR +I+ V G S +A + DEM
Sbjct: 584 INGFSEQGNMEEAGRVF---KKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEM 638
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 156/343 (45%), Gaps = 19/343 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ N ++ C Q V A ++E MS GV P+E++F L + +G E
Sbjct: 85 IKPDVVTFNTLMKALCRAHQ-VRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 143
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD-FSKE--T 332
+ +++ M E G S+ V + LI+GY KLG +E A LG E +D F + T
Sbjct: 144 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA-------LGYIQQEIADGFEPDQIT 196
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV-GFGIISACV-NLGLSDKAHSI 390
Y V G QN +V G A +++ E D V + I+ C+ G ++A I
Sbjct: 197 YNTFVNGLCQNDHV-GHALKVMDVMVQEGH----DPDVFTYNIVVNCLCKNGQLEEAKGI 251
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L++M GC + + + A C +R EA L ++ G+ DV ++ LI A
Sbjct: 252 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 311
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
D A LF +M+ + + +Y T++ L + L + +E T
Sbjct: 312 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD-MESTGCPRSTI 370
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N+II CK R+E+A+ +M N T+ +LI+G
Sbjct: 371 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 413
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 160/414 (38%), Gaps = 41/414 (9%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D +P+ N + G C V A KV++ M G P+ ++ + G E
Sbjct: 188 DGFEPDQITYNTFVNGLCQN-DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 246
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ + + M + G + +++LI+ LC G E D +++
Sbjct: 247 EAKGILNQMVDRGCLPDITTFNTLIAA---------------LCTGNRLEEALDLARQVT 291
Query: 334 CEVVKGFLQNGNVKGLANLIIEA----------QKLEPSGIVVDRSVGFGIISACVNLGL 383
+ V + N+ L N + + ++++ SG D +I +LG
Sbjct: 292 VKGVSPDVYTFNI--LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 349
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
KA +L +M + GC Y + CK+ R EA ++ + G+ + ++
Sbjct: 350 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 409
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI+ + AF L M + +Y +I+T + + A L+ + +
Sbjct: 410 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 469
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
EV + ++I+ CKAGR + A + LR M P + Y ++
Sbjct: 470 -FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 528
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG-----FFDAVMQVVEKS 612
L ++ R+++ G+ + +V L +GG FD ++++V+K
Sbjct: 529 LSLF----REMAEVGEPPDALTYKIV---FRGLCRGGGPIKEAFDFMLEMVDKG 575
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 119/297 (40%), Gaps = 20/297 (6%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
+IT+ T + N +EA + +T + P N LI L + D H R F
Sbjct: 263 DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLF 322
Query: 127 ASVVYVIEKNPKLL-DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLV 185
+ KN D T +TL+ ++ + A L+K M + +
Sbjct: 323 EEM-----KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 377
Query: 186 DICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIE 245
+C+K EE + +L + N N ++G C + + DA ++I
Sbjct: 378 GLCKKMR--------IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD-KKIDDAFELIN 428
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M G++PN ++ + Y +G +K ++ M GF +V Y +LI+G K G
Sbjct: 429 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 488
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE-AQKLEP 361
+ A L L G ++ + + Y V++ + N++ +L E A+ EP
Sbjct: 489 RTQVA----LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 541
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 154/343 (44%), Gaps = 19/343 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ N ++ C Q V A ++E MS GV P+E++F L + +G E
Sbjct: 177 IKPDVVTFNTLMKALCRAHQ-VRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD-FSKE--T 332
+ +++ M E G S+ V + LI+GY KLG +E A LG E +D F + T
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA-------LGYIQQEIADGFEPDQIT 288
Query: 333 YCEVVKGFLQNGNV-KGLANLIIEAQKLEPSGIVVDRSVGFGIISACV-NLGLSDKAHSI 390
Y V G QN +V L + + Q+ + + I+ C+ G ++A I
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT-----YNIVVNCLCKNGQLEEAKGI 343
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L++M GC + + + A C +R EA L ++ G+ DV ++ LI A
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
D A LF +M+ + + +Y T++ L + L + +E T
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD-MESTGCPRSTI 462
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N+II CK R+E+A+ +M N T+ +LI+G
Sbjct: 463 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 160/414 (38%), Gaps = 41/414 (9%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D +P+ N + G C V A KV++ M G P+ ++ + G E
Sbjct: 280 DGFEPDQITYNTFVNGLCQN-DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 338
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ + + M + G + +++LI+ LC G E D +++
Sbjct: 339 EAKGILNQMVDRGCLPDITTFNTLIAA---------------LCTGNRLEEALDLARQVT 383
Query: 334 CEVVKGFLQNGNVKGLANLIIEA----------QKLEPSGIVVDRSVGFGIISACVNLGL 383
+ V + N+ L N + + ++++ SG D +I +LG
Sbjct: 384 VKGVSPDVYTFNI--LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
KA +L +M + GC Y + CK+ R EA ++ + G+ + ++
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI+ + AF L M + +Y +I+T + + A L+ + +
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
EV + ++I+ CKAGR + A + LR M P + Y ++
Sbjct: 562 -FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 620
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG-----FFDAVMQVVEKS 612
L ++ R+++ G+ + +V L +GG FD ++++V+K
Sbjct: 621 LSLF----REMAEVGEPPDALTYKIV---FRGLCRGGGPIKEAFDFMLEMVDKG 667
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 119/297 (40%), Gaps = 20/297 (6%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
+IT+ T + N +EA + +T + P N LI L + D H R F
Sbjct: 355 DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLF 414
Query: 127 ASVVYVIEKNPKLL-DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLV 185
+ KN D T +TL+ ++ + A L+K M + +
Sbjct: 415 EEM-----KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469
Query: 186 DICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIE 245
+C+K EE + +L + N N ++G C + + DA ++I
Sbjct: 470 GLCKKMR--------IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD-KKIDDAFELIN 520
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M G++PN ++ + Y +G +K ++ M GF +V Y +LI+G K G
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE-AQKLEP 361
+ A L L G ++ + + Y V++ + N++ +L E A+ EP
Sbjct: 581 RTQVA----LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 633
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 3/183 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS- 432
II +G D ++ EM G V LGV L +Y + +A L+++
Sbjct: 80 IIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL 139
Query: 433 -GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
G+Q D Y+ L+ + + S++ +M I ++ T+M L H+
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
L+E+ V + +++ F + G +E A R RM+ + T LI
Sbjct: 200 AVIMLEEM-SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 552 NGY 554
NGY
Sbjct: 259 NGY 261
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 154/343 (44%), Gaps = 19/343 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ N ++ C Q V A ++E MS GV P+E++F L + +G E
Sbjct: 177 IKPDVVTFNTLMKALCRAHQ-VRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD-FSKE--T 332
+ +++ M E G S+ V + LI+GY KLG +E A LG E +D F + T
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA-------LGYIQQEIADGFEPDQIT 288
Query: 333 YCEVVKGFLQNGNV-KGLANLIIEAQKLEPSGIVVDRSVGFGIISACV-NLGLSDKAHSI 390
Y V G QN +V L + + Q+ + + I+ C+ G ++A I
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT-----YNIVVNCLCKNGQLEEAKGI 343
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L++M GC + + + A C +R EA L ++ G+ DV ++ LI A
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
D A LF +M+ + + +Y T++ L + L + +E T
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD-MESTGCPRSTI 462
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N+II CK R+E+A+ +M N T+ +LI+G
Sbjct: 463 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 160/414 (38%), Gaps = 41/414 (9%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D +P+ N + G C V A KV++ M G P+ ++ + G E
Sbjct: 280 DGFEPDQITYNTFVNGLCQN-DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 338
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ + + M + G + +++LI+ LC G E D +++
Sbjct: 339 EAKGILNQMVDRGCLPDITTFNTLIAA---------------LCTGNRLEEALDLARQVT 383
Query: 334 CEVVKGFLQNGNVKGLANLIIEA----------QKLEPSGIVVDRSVGFGIISACVNLGL 383
+ V + N+ L N + + ++++ SG D +I +LG
Sbjct: 384 VKGVSPDVYTFNI--LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
KA +L +M + GC Y + CK+ R EA ++ + G+ + ++
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI+ + AF L M + +Y +I+T + + A L+ + +
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
EV + ++I+ CKAGR + A + LR M P + Y ++
Sbjct: 562 -FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 620
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG-----FFDAVMQVVEKS 612
L ++ R+++ G+ + +V L +GG FD ++++V+K
Sbjct: 621 LSLF----REMAEVGEPPDALTYKIV---FRGLCRGGGPIKEAFDFMLEMVDKG 667
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 119/297 (40%), Gaps = 20/297 (6%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
+IT+ T + N +EA + +T + P N LI L + D H R F
Sbjct: 355 DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLF 414
Query: 127 ASVVYVIEKNPKLL-DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLV 185
+ KN D T +TL+ ++ + A L+K M + +
Sbjct: 415 EEM-----KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469
Query: 186 DICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIE 245
+C+K EE + +L + N N ++G C + + DA ++I
Sbjct: 470 GLCKKMR--------IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD-KKIDDAFELIN 520
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M G++PN ++ + Y +G +K ++ M GF +V Y +LI+G K G
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE-AQKLEP 361
+ A L L G ++ + + Y V++ + N++ +L E A+ EP
Sbjct: 581 RTQVA----LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 633
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 3/183 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS- 432
II +G D ++ EM G V LGV L +Y + +A L+++
Sbjct: 80 IIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL 139
Query: 433 -GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
G+Q D Y+ L+ + + S++ +M I ++ T+M L H+
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
L+E+ V + +++ F + G +E A R RM+ + T LI
Sbjct: 200 AVLMLEEM-SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 552 NGY 554
NGY
Sbjct: 259 NGY 261
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 158/397 (39%), Gaps = 46/397 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP + NA + G C VSDA +I+ M G +PNE ++G + + G +
Sbjct: 174 KPTLITLNALVNGLCLN-GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
EL M E V YS +I G K G+L++A ME F + Y
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF------NEMEIKGFKADIIIYT 286
Query: 335 EVVKGFLQNGNVKGLANLIIE--AQKLEPS------------------------------ 362
+++GF G A L+ + +K+ P
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR 346
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
GI D +I DKA+ +LD M + GC + + + YCK + +
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+L +S G+ D Y+ LI+ + A LF++M R+ SY ++ G
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
L +N PE A + E +E ++E+ +N IIH C A +++DA + +P
Sbjct: 467 LCDNGEPE-KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQ 579
+ +TY +I G +++ RK+ DG
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLF----RKMEEDGH 558
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 143/362 (39%), Gaps = 52/362 (14%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+Y + + CC + +S A + + LG P+ +F L L+G + +EL
Sbjct: 106 NLYTLSIMINCCCR-CRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALEL 164
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEV 336
M E G ++ ++L++G G + A I M ++ F ++ TY V
Sbjct: 165 VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI------DRMVETGFQPNEVTYGPV 218
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+K ++G L+ +K+E I +D II G D A ++ +EM
Sbjct: 219 LKVMCKSGQTALAMELL---RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + +Y ++ +C R + +L+ D+ + DV + ALI+ + +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A L ++M + I P+ T + S+I
Sbjct: 336 AEELHKEMIQRGI------------------SPD------------------TVTYTSLI 359
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
FCK +L+ A L M+ PN +T+ LINGY A L E+ RK+S
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL----ELFRKMSL 415
Query: 577 DG 578
G
Sbjct: 416 RG 417
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 156/343 (45%), Gaps = 19/343 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ N ++ C Q V A ++E MS GV P+E++F L + +G E
Sbjct: 177 IKPDVVTFNTLMKALCRAHQ-VRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD-FSKE--T 332
+ +++ M E G S+ V + LI+GY KLG +E A LG E +D F + T
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA-------LGYIQQEIADGFEPDQIT 288
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV-GFGIISACV-NLGLSDKAHSI 390
Y V G QN +V G A +++ E D V + I+ C+ G ++A I
Sbjct: 289 YNTFVNGLCQNDHV-GHALKVMDVMVQEGH----DPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L++M GC + + + A C +R EA L ++ G+ DV ++ LI A
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
D A LF +M+ + + +Y T++ L + L + +E T
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD-MESTGCPRSTI 462
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N+II CK R+E+A+ +M N T+ +LI+G
Sbjct: 463 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 160/414 (38%), Gaps = 41/414 (9%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D +P+ N + G C V A KV++ M G P+ ++ + G E
Sbjct: 280 DGFEPDQITYNTFVNGLCQN-DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 338
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ + + M + G + +++LI+ LC G E D +++
Sbjct: 339 EAKGILNQMVDRGCLPDITTFNTLIAA---------------LCTGNRLEEALDLARQVT 383
Query: 334 CEVVKGFLQNGNVKGLANLIIEA----------QKLEPSGIVVDRSVGFGIISACVNLGL 383
+ V + N+ L N + + ++++ SG D +I +LG
Sbjct: 384 VKGVSPDVYTFNI--LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
KA +L +M + GC Y + CK+ R EA ++ + G+ + ++
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI+ + AF L M + +Y +I+T + + A L+ + +
Sbjct: 502 LIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
EV + ++I+ CKAGR + A + LR M P + Y ++
Sbjct: 562 -FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 620
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG-----FFDAVMQVVEKS 612
L ++ R+++ G+ + +V L +GG FD ++++V+K
Sbjct: 621 LSLF----REMAEVGEPPDALTYKIV---FRGLCRGGGPIKEAFDFMLEMVDKG 667
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 20/297 (6%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
+IT+ T + N +EA + +T + P N LI L + D H R F
Sbjct: 355 DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLF 414
Query: 127 ASVVYVIEKNPKLL-DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLV 185
+ KN D T +TL+ ++ + A L+K M + +
Sbjct: 415 EEM-----KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469
Query: 186 DICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIE 245
+C+K EE + +L + N N ++G C + + DA +I
Sbjct: 470 GLCKKMR--------IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD-KKIDDAFGLIN 520
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M G++PN ++ + Y +G +K ++ M GF +V Y +LI+G K G
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE-AQKLEP 361
+ A L L G ++ + + Y V++ + N++ +L E A+ EP
Sbjct: 581 RTQVA----LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 633
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 3/183 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS- 432
II +G D ++ EM G V LGV L +Y + +A L+++
Sbjct: 80 IIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL 139
Query: 433 -GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
G+Q D Y+ L+ + + S++ +M I ++ T+M L H+
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
L+E+ V + +++ F + G +E A R RM+ + T LI
Sbjct: 200 AVLMLEEM-SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 552 NGY 554
NGY
Sbjct: 259 NGY 261
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 161/368 (43%), Gaps = 18/368 (4%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
F+E RI + ++P++ N+ + G C + + +A+ + M G++PN ++G
Sbjct: 497 FQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKS-RKMEEAKDYLVEMIERGLKPNVYTYG 555
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L + Y G + M G + V ++LI GY K G+ A+ +I C+ G
Sbjct: 556 ALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEAT-SIFRCMLG 614
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
++ TY ++ G L+NG ++G L+ E G+V D IIS
Sbjct: 615 RSVHPD---VRTYSALIHGLLRNGKLQGAMELLSE---FLEKGLVPDVFTYNSIISGFCK 668
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G KA + + M G S + Y + CK A +L I GL +
Sbjct: 669 QGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVT 728
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM-ENHRPELMAAFLDEV 499
Y +I+ S + AF LF +M + Y ++ G E + + ++ FL+ V
Sbjct: 729 YATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESV 788
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN-----GY 554
+ T N+++ FCK+G++ +A + L M+ +P+ TY LI+ G+
Sbjct: 789 ---QKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGF 845
Query: 555 VT-AEQYF 561
+ AEQ+F
Sbjct: 846 LKEAEQFF 853
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 148/358 (41%), Gaps = 48/358 (13%)
Query: 218 PNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P Y C + G C +G S+ DA +V E M LGV+PN + L + +G ++ V
Sbjct: 444 PTAYTCGMIINGLCRHG--SIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAV 501
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+ +M++ G ++ Y+S+I G K +E A ++ + G ++ + + TY +
Sbjct: 502 RILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERG-LKPNVY---TYGAL 557
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ G+ ++G ++ V DR EM
Sbjct: 558 IHGYCKSGEMQ-----------------VADR---------------------YFKEMLG 579
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
CG + V + YCKE T EAT + + + DV Y ALI + + Q
Sbjct: 580 CGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQG 639
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSI 515
A L + E + +Y +I++G + + + AF L E + + +N++
Sbjct: 640 AMELLSEFLEKGLVPDVFTYNSIISGFCK--QGGIGKAFQLHEYMCQKGISPNIITYNAL 697
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
I+ CKAG +E A+ + N TY ++I+GY + ++ E+ K
Sbjct: 698 INGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLK 755
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 165/391 (42%), Gaps = 31/391 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+K N++ NA ++G C + A+ ++ M ++G++P+ ++ + Y + ++
Sbjct: 372 VKLNLFTYNALVKGVCK-FGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRV 430
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT--ILLCLGGGNMEQSDFSKETY 333
+L S M + +I+G + G++E ASR I++ LG + Y
Sbjct: 431 KDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLG------VKPNAVIY 484
Query: 334 CEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++KG +Q G + + +++ + ++P ++ SV II C + + ++A L
Sbjct: 485 TTLIKGHVQEGRFQEAVRILKVMDKKGVQPD-VLCYNSV---IIGLCKSRKM-EEAKDYL 539
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
EM G + Y + YCK A + ++ G+ + ALI+
Sbjct: 540 VEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKE 599
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
A S+FR M ++ +Y ++ GL+ N + + L E +E V
Sbjct: 600 GSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVP-DVFT 658
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+NSII FCK G + A + M PN TY +LING A EI+
Sbjct: 659 YNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKA----------GEIE 708
Query: 572 RKIST-DGQKGIKFEHNLVDAFLYALVKGGF 601
R DG G HN A YA + G+
Sbjct: 709 RARELFDGIPGKGLAHN---AVTYATIIDGY 736
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 128/289 (44%), Gaps = 24/289 (8%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G+ P+ ++ + + +G K +L M + G S ++ Y++LI+G K G +E A
Sbjct: 651 GLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERA 710
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
R + + G + + TY ++ G+ ++GN+ L E + G+ D V
Sbjct: 711 -RELFDGIPGKGLAHNAV---TYATIIDGYCKSGNLSKAFRLFDE---MTLKGVPPDSFV 763
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT-----LKAYCKEHRTAEATQL 425
+I C G ++KA S+ E SV G + + +CK + EA QL
Sbjct: 764 YSALIDGCRKEGNTEKALSLFLE------SVQKGFASTSSLNALMDGFCKSGKVIEANQL 817
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-M 484
+ D+ ++ D Y LI+ + + A F DM++ + +Y +++G M
Sbjct: 818 LEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNM 877
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
R E+ A F + + +D +E W+ +I A K G D +TL+
Sbjct: 878 AGRRSEMFALFDEMIAKD--IEPDGVTWSVMIDAHLKEG---DHVKTLK 921
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 140/330 (42%), Gaps = 59/330 (17%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKG 339
M E G S +V Y+ +I G + G ++ A L M++ + TY ++ G
Sbjct: 262 MEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKL------MDKKGLVADVFTYSILIDG 315
Query: 340 FLQNGNVKGLANLIIE---AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
F + A L++E ++ L+P + +I + G S +A + +EM A
Sbjct: 316 FGKQKRCTE-AKLMLEEMFSKGLKPGHVAYT-----ALIDGFMRQGDSGEAFRVKEEMLA 369
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + L Y +K CK +A L+ ++ G++ D Y+ +IE + Q+
Sbjct: 370 RGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSR 429
Query: 457 AFSLFRDMRE--------------------------ARIYDLKGS---------YLTIMT 481
L +M++ +R++++ S Y T++
Sbjct: 430 VKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIK 489
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
G ++ R + L +V++ V+ +NS+I CK+ ++E+AK L MI +
Sbjct: 490 GHVQEGRFQEAVRIL-KVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLK 548
Query: 542 PNDQTYLSLINGYV------TAEQYFSVLM 565
PN TY +LI+GY A++YF ++
Sbjct: 549 PNVYTYGALIHGYCKSGEMQVADRYFKEML 578
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 3/200 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I+A G + + +L EM GCS L Y + C+ EA +L + G
Sbjct: 242 LINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKG 301
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
L DV Y LI+ + A + +M + +Y ++ G M + +
Sbjct: 302 LVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFM--RQGDSGE 359
Query: 494 AF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
AF + E + V++ +N+++ CK G +E A L MI + +P+ QTY ++I
Sbjct: 360 AFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIE 419
Query: 553 GYVTAEQYFSVLMMWHEIKR 572
GY+ + V + E+K+
Sbjct: 420 GYLKEQNTSRVKDLLSEMKK 439
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 143/368 (38%), Gaps = 41/368 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ N+ + G C + A ++ E M G+ PN ++ L G E+ E
Sbjct: 654 PDVFTYNSIISGFCKQ-GGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARE 712
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT-------------------ILLCL 318
L + G + V Y+++I GY K GNL A R I C
Sbjct: 713 LFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCR 772
Query: 319 GGGNMEQSDFSKETYCEVV-KGFLQNGNVKGL------ANLIIEAQKLEPSGIVVDRSVG 371
GN E++ + E V KGF ++ L + +IEA +L +VD+ V
Sbjct: 773 KEGNTEKA---LSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLED--MVDKHVK 827
Query: 372 FGIISACV------NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
++ + G +A +M Y L Y R +E L
Sbjct: 828 PDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFAL 887
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLM 484
++ + ++ D + +I+A + D L DM ++ ++ I
Sbjct: 888 FDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCR 947
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
+ H E++ E +E+ + + ++++ F KAG+++ A R L+ M+ ++ P+
Sbjct: 948 KEHVSEVLKVL--EKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDS 1005
Query: 545 QTYLSLIN 552
LIN
Sbjct: 1006 TELNDLIN 1013
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 142/341 (41%), Gaps = 10/341 (2%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ N + G C + V +A+ ++ M G++PN ++G LY+ G +
Sbjct: 519 PDLFCYNCLIIGLCRA-KKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAER 577
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M G V Y+ LI G+ +GN A T L G + Y ++
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDI----RAYSAII 633
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+NG K + ++ K +G+V D + +IS G +KA + DEM
Sbjct: 634 HSLSKNGKTKEAMGVFLKFLK---TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + + VY + CK +A +L +I L DV Y +I+ S + A
Sbjct: 691 GINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEA 750
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
F LF +M I Y ++ G + E + E + + +NS+I
Sbjct: 751 FKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSA--FNSLID 808
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+FCK G++ +A+ M+ + PN TY LI+ Y AE
Sbjct: 809 SFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAE 849
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 205/493 (41%), Gaps = 27/493 (5%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQ 143
+ EA F+S+ ++ L P++ +LI N++ A +I + KL +
Sbjct: 327 SKEAKLIFESMPSSGLNPNRFTYTALI---DGFIKEGNIEEALRIKDEMITRGLKL-NVV 382
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE- 202
T + ++G + A A A +L M L G D N +LK +
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEM----------LMAGLEPDTWTYNLLIDGYLKSHDM 432
Query: 203 -ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
+ C + + + P+ + + + G C+ + A +V++ M GV+PN +G
Sbjct: 433 AKACELLAEMKARKLTPSPFTYSVLISGLCHS-SDLQKANEVLDQMIRNGVKPNVFMYGT 491
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L Y + E +EL +M G + Y+ LI G + +E A + +L+ +G
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA-KMLLVDMGEK 550
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
++ + TY + + ++G ++ + + SGIV + + +I ++
Sbjct: 551 GIKPN---AHTYGAFINLYSKSGEIQVAERYF---KDMLSSGIVPNNVIYTILIKGHCDV 604
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G + +A S M G + Y + + K +T EA + + +G+ DV Y
Sbjct: 605 GNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLY 664
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
++LI D + A L+ +M I Y T++ GL + DE+ E
Sbjct: 665 NSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEE 724
Query: 502 DPRV-EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
V +V T +++II +CK+G L +A + MI P+ Y LI+G
Sbjct: 725 KDLVPDVVT--YSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL 782
Query: 561 FSVLMMWHEIKRK 573
L ++HE ++K
Sbjct: 783 EKALSLFHEAQQK 795
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 175/441 (39%), Gaps = 82/441 (18%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN++ NA + G C +V +A +V + M G+ P+ ++ L + + ++
Sbjct: 273 KPNLFTYNAFIGGLCQ-TGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK 331
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------SRTILL------CLGGGN 322
+ M G + Y++LI G++K GN+E A +R + L + GG
Sbjct: 332 LIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGI 391
Query: 323 MEQSDFSKE-----------------TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSG 363
+ + +K TY ++ G+L++ ++ L+ E A+KL PS
Sbjct: 392 AKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP 451
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+IS + KA+ +LD+M G + +Y +KAY +E R A
Sbjct: 452 FTYSV-----LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+L+ + ++G+ D+ Y+ LI ++ + A L DM E I
Sbjct: 507 ELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGI-------------- 552
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+P H + + I+ + K+G ++ A+R + M+ PN
Sbjct: 553 ----KP------------------NAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFD 603
+ Y LI G+ L + + +KG+ + A +++L K G
Sbjct: 591 NVIYTILIKGHCDVGNTVEALSTFKCML-------EKGLIPDIRAYSAIIHSLSKNGKTK 643
Query: 604 AVMQVVEKSQEMKVFVDKWKY 624
M V K + V D + Y
Sbjct: 644 EAMGVFLKFLKTGVVPDVFLY 664
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 158/413 (38%), Gaps = 56/413 (13%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLI-AHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTV 145
A + FK + ++ + P+ + LI H D N A ++ ++EK + D +
Sbjct: 575 AERYFKDMLSSGIVPNNVIYTILIKGHC----DVGNTVEALSTFKCMLEKG-LIPDIRAY 629
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE-EC 204
++ S+ A + F+ F L G + D+ NS F K + E
Sbjct: 630 SAIIHSLSKNGKTKEAMGV---------FLKF-LKTGVVPDVFLYNSLISGFCKEGDIEK 679
Query: 205 CRIALDENL-DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
DE L + + PNI N + G C L V+ A ++ + + + P+ ++ +
Sbjct: 680 ASQLYDEMLHNGINPNIVVYNTLINGLC-KLGEVTKARELFDEIEEKDLVPDVVTYSTII 738
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
Y G + +L M G S Y LI G K GNLE A L L
Sbjct: 739 DGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA-----LSLFHEAQ 793
Query: 324 EQSDFSKETYCEVVKGFLQNGNV----------------------------KGLANLIIE 355
++S S + ++ F ++G V G A ++ E
Sbjct: 794 QKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEE 853
Query: 356 AQKL----EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
A++L E I+ + ++ + +G K S+ +M A G + Y
Sbjct: 854 AEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMAS 913
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
AYCKE ++ EA +L+ G++L+ +DALI + + L +M
Sbjct: 914 AYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM 966
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 16/348 (4%)
Query: 207 IALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
I E L F KPN+ + N + G Y + ++ A ++++ M V G+ P+ ++G L
Sbjct: 250 IGFMEGLGF-KPNVVSYNTIIHG--YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISG 306
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
+G E+ L M E G V Y++LI GY G+LE A + G M
Sbjct: 307 MCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP- 365
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
S TY +V G + ++I E +K GI+ D +I+ G +
Sbjct: 366 ---SVSTYNLLVHALFMEGRMGEADDMIKEMRK---KGIIPDAITYNILINGYSRCGNAK 419
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
KA + +EM + G Y + + +R EA L I G+ DV ++A++
Sbjct: 420 KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 479
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ + + + AF L ++M + + ++ T+M G + E LDE+ R
Sbjct: 480 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM---KRR 536
Query: 506 EVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+K +N++I + + G ++DA R M+ + F P TY +LI
Sbjct: 537 GIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 584
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 36/141 (25%)
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CKE + +A + + + G + +V +Y+ +I + + + A + MR +K
Sbjct: 238 CKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMR------VK 291
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
G +E ++ + S+I CK GRLE+A
Sbjct: 292 G------------------------------IEPDSYTYGSLISGMCKEGRLEEASGLFD 321
Query: 534 RMIFLQFEPNDQTYLSLINGY 554
+M+ + PN TY +LI+GY
Sbjct: 322 KMVEIGLVPNAVTYNTLIDGY 342
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 102/249 (40%), Gaps = 11/249 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ +A+ +I+ M G+ P+ ++ L Y+ G +K +L + M G V Y+S
Sbjct: 383 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS 442
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLII 354
LI + ++ A L G S + + +V G NGNV+ L+
Sbjct: 443 LIYVLSRRNRMKEADDLFEKILDQG------VSPDVIMFNAMVDGHCANGNVERAFMLLK 496
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
E + + D ++ G ++A +LDEM G Y + Y
Sbjct: 497 EMDR---KSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYG 553
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+ +A ++ ++ S G + Y+ALI+ +Q+ A L ++M I
Sbjct: 554 RRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDS 613
Query: 475 SYLTIMTGL 483
+YL+++ G+
Sbjct: 614 TYLSLIEGM 622
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 16/348 (4%)
Query: 207 IALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
I E L F KPN+ + N + G Y + ++ A ++++ M V G+ P+ ++G L
Sbjct: 272 IGFMEGLGF-KPNVVSYNTIIHG--YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISG 328
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
+G E+ L M E G V Y++LI GY G+LE A + G M
Sbjct: 329 MCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP- 387
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
S TY +V G + ++I E +K GI+ D +I+ G +
Sbjct: 388 ---SVSTYNLLVHALFMEGRMGEADDMIKEMRK---KGIIPDAITYNILINGYSRCGNAK 441
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
KA + +EM + G Y + + +R EA L I G+ DV ++A++
Sbjct: 442 KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 501
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ + + + AF L ++M + + ++ T+M G + E LDE+ R
Sbjct: 502 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM---KRR 558
Query: 506 EVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+K +N++I + + G ++DA R M+ + F P TY +LI
Sbjct: 559 GIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 606
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 36/141 (25%)
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CKE + +A + + + G + +V +Y+ +I + + + A + MR +K
Sbjct: 260 CKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMR------VK 313
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
G +E ++ + S+I CK GRLE+A
Sbjct: 314 G------------------------------IEPDSYTYGSLISGMCKEGRLEEASGLFD 343
Query: 534 RMIFLQFEPNDQTYLSLINGY 554
+M+ + PN TY +LI+GY
Sbjct: 344 KMVEIGLVPNAVTYNTLIDGY 364
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 102/249 (40%), Gaps = 11/249 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ +A+ +I+ M G+ P+ ++ L Y+ G +K +L + M G V Y+S
Sbjct: 405 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS 464
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLII 354
LI + ++ A L G S + + +V G NGNV+ L+
Sbjct: 465 LIYVLSRRNRMKEADDLFEKILDQG------VSPDVIMFNAMVDGHCANGNVERAFMLLK 518
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
E + + D ++ G ++A +LDEM G Y + Y
Sbjct: 519 EMDR---KSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYG 575
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+ +A ++ ++ S G + Y+ALI+ +Q+ A L ++M I
Sbjct: 576 RRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDS 635
Query: 475 SYLTIMTGL 483
+YL+++ G+
Sbjct: 636 TYLSLIEGM 644
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 152/336 (45%), Gaps = 9/336 (2%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN NA + C G S A K+ M G N ++ + L G EK +
Sbjct: 371 PNTVTYNALINELCVG-GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 429
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M + G +V Y++LI+GY+ GN+ +A+R LL L N + D + TY E+V
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR--LLDLMKENGCEPD--EWTYNELV 485
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
GF + G ++ + Q++ G+ + +I G D A S+L M
Sbjct: 486 SGFSKWGKLESAS---FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM 542
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC+ + Y + KE+R +EA ++ + GL +V Y LI+ + Q A
Sbjct: 543 GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFA 602
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
F +F DM + + +Y +++ GL + + + L E +E + + S+I
Sbjct: 603 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKE-MERKGLAPDEVTFTSLID 661
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
F GR++ A LRRM+ + +PN +TY L+ G
Sbjct: 662 GFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKG 697
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 101/492 (20%), Positives = 188/492 (38%), Gaps = 74/492 (15%)
Query: 91 FKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLG 150
+K + + + PS N+LI LS + S ++ + +P + + ++ +LG
Sbjct: 186 YKQMLNSGIQPSLLTFNTLINILSK-KGKVREAELILSQIFQYDLSPDVFTYTSL--ILG 242
Query: 151 SMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIA-L 209
RN N AF + M K + C NS V + + C +
Sbjct: 243 HCRNRNLDL-AFGVFDRMVK---------------EGCDPNS--VTYSTLINGLCNEGRV 284
Query: 210 DENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
DE LD ++ P +Y + C ++ +A +++ M G RPN ++
Sbjct: 285 DEALDMLEEMIEKGIEPTVYTYTLPITALCA-IEHEEEAIELVARMKKRGCRPNVQTYTA 343
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L + G E + L M + G V Y++LI+ G +A + G G
Sbjct: 344 LISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 403
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
++ + +TY E++KG G+++ L + K+ P VV + +I+ +
Sbjct: 404 SLANT----QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT---LINGYLTK 456
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G + A +LD M GC Y + + K + A+ ++ GL + +Y
Sbjct: 457 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 516
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
ALI+ A SL + M E
Sbjct: 517 TALIDGHSKDGKVDIALSLLKRMEEMGC-------------------------------- 544
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
+P VE +N++I+ K R +A++ +M+ PN TY +LI+G +
Sbjct: 545 NPNVE----SYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQ 600
Query: 562 SVLMMWHEIKRK 573
++H+++++
Sbjct: 601 FAFKIFHDMEKR 612
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 162/405 (40%), Gaps = 52/405 (12%)
Query: 168 MFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKP--------N 219
+ ++R F P + ++ CR EE R+A DF+ +
Sbjct: 118 LVRDRVFAPADHIRILMIKACRNE----------EEIRRVA-----DFLNEISGMGFGFS 162
Query: 220 IYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELE 279
+Y+CN L + V A + + M G++P+ +F L + + KG K+ E E
Sbjct: 163 LYSCNTLLIQLA-KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG---KVREAE 218
Query: 280 SLMNE---FGFSSQMVFYSSLISGYVKLGNLESA----SRTILLCLGGGNMEQSDFSKET 332
++++ + S + Y+SLI G+ + NL+ A R + E D + T
Sbjct: 219 LILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV--------KEGCDPNSVT 270
Query: 333 YCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
Y ++ G G V +++ E + +EP+ I+A + ++A +
Sbjct: 271 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP-----ITALCAIEHEEEAIEL 325
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+ M GC + Y + + + A L + GL + Y+ALI
Sbjct: 326 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 385
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-DPRVEVKT 509
F +A +F M +Y I+ GL E +++++ P V T
Sbjct: 386 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 445
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N++I+ + G + +A R L M EP++ TY L++G+
Sbjct: 446 --YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF 488
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 102/253 (40%), Gaps = 9/253 (3%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
I+ C N L D A + D M GC Y + C E R EA ++ ++ G
Sbjct: 240 ILGHCRNRNL-DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ V Y I A + + A L M++ +Y +++GL + E+
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+++++ V T +N++I+ C GR A + M N QTY +I G
Sbjct: 359 GLYHKMLKEGLVP-NTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 417
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
++++ ++ + + + L++ + L KG +A ++++ +
Sbjct: 418 LCLGGDIEKAMVLF---EKMLKMGPLPTVVTYNTLINGY---LTKGNVNNAA-RLLDLMK 470
Query: 614 EMKVFVDKWKYKQ 626
E D+W Y +
Sbjct: 471 ENGCEPDEWTYNE 483
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 173/409 (42%), Gaps = 26/409 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ N+ ++G C Q++ A +++ M GV P+ ++ + Y G E+
Sbjct: 231 LPPDVVTYNSLIDGLCKA-QAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEA 289
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V L M+ G +V YS LI Y K+G A + G S Y
Sbjct: 290 VRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTI----YHI 345
Query: 336 VVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ G+ G +V+ L +L+I GI + +I A G DKA +
Sbjct: 346 LLHGYATKGALIDVRDLLDLMIR------DGIPFEHRAFNILICAYAKHGAVDKAMTAFT 399
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM G + Y + CK R +A + S GL ++ ++ +LI +
Sbjct: 400 EMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIG 459
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+++ L +M I+ TIM L + R F D V+ V+ +
Sbjct: 460 EWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH-IGVKPDVVSY 518
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
N++I +C G+++++ + L RM+ + P+ TY SL+NGY + L ++ E+ R
Sbjct: 519 NTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFR 578
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGFFDAV----MQVVEKSQEMKV 617
K +KF + L+ L + G A M++V++ ++++
Sbjct: 579 -------KDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRI 620
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/437 (19%), Positives = 167/437 (38%), Gaps = 25/437 (5%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T ++L+ + A A A+++ MF + + C L
Sbjct: 234 DVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCS--------LGQ 285
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
EE R+ + ++P++ + ++ C + ++A V ++M G +PN + +
Sbjct: 286 LEEAVRLLKKMSGSGLQPDVVTYSLLIQYYC-KIGRCAEARSVFDSMVRKGQKPNSTIYH 344
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L + YA KG + +L LM G + ++ LI Y K G ++ A
Sbjct: 345 ILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFT----- 399
Query: 321 GNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
M Q+ + +Y V+ + G V+ + + ++ G+ + +I
Sbjct: 400 -EMRQNGLRPDVVSYSTVIHILCKTGRVE---DAVYHFNQMVSEGLSPNIISFTSLIHGL 455
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
++G K + EM G + CKE R EA + G++ DV
Sbjct: 456 CSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDV 515
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
+Y+ LI+ + M + +Y +++ G +N R E A E
Sbjct: 516 VSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYRE 575
Query: 499 VVEDPRVEVK--THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+ R +VK N ++H +AGR+ A+ +M+ + +TY +++ G
Sbjct: 576 MF---RKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCE 632
Query: 557 AEQYFSVLMMWHEIKRK 573
L M+ +++ K
Sbjct: 633 NSCVDEALRMFEDLRSK 649
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 107/530 (20%), Positives = 196/530 (36%), Gaps = 68/530 (12%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
N+ S T + D+A+ F + L P NSLI L Q + +A
Sbjct: 199 NVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQ---AMDKAV 255
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
A + ++ +K + D +T + ++ + A L+K M P + L+
Sbjct: 256 AILQHMFDKGV-MPDTRTYNIMIRGYCSLGQLEEAVRLLKKM-SGSGLQPDVVTYSLLIQ 313
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDAEKVIE 245
K VF+ R KPN + L G Y + ++ D +++
Sbjct: 314 YYCKIGRCAEARSVFDSMVRKG-------QKPNSTIYHILLHG--YATKGALIDVRDLLD 364
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M G+ +F L YA G +K + + M + G +V YS++I K G
Sbjct: 365 LMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTG 424
Query: 306 NLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEA--QKLEP 361
+E A M S ++ ++ G G K + L E + + P
Sbjct: 425 RVEDAVYHF------NQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHP 478
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
I ++ I+ G +A D + G + Y + YC + E
Sbjct: 479 DAIFMNT-----IMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDE 533
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM----------------- 464
+ + + + S GL+ D Y++L+ + + A +L+R+M
Sbjct: 534 SIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLH 593
Query: 465 ---REARIYDLKGSYL---------------TIMTGLMENH-RPELMAAFLDEVVEDPRV 505
+ RI + Y+ T++ GL EN E + F D ++ +
Sbjct: 594 GLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFEL 653
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+V+T ++ +I+A K GR+++AK M+ P+ TY +I ++
Sbjct: 654 DVRT--FSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHI 701
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 181/429 (42%), Gaps = 56/429 (13%)
Query: 233 GLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
G V+D +K V + + G P ++G L LY G K +E+ +M E G
Sbjct: 458 GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Query: 290 QMVFYSSLISGYVKLGNLESA-------------------SRTILLCLGGGNMEQS---- 326
+ YS +I+G+VKL + +A + I G GNM+++
Sbjct: 518 NLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTV 577
Query: 327 --------DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
+ T+ ++ G+ ++G+++ + + G V G+I+
Sbjct: 578 KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF---DMMRRCGCVPTVHTFNGLINGL 634
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
V +A ILDEM G S Y ++ Y T +A + + + GL +D+
Sbjct: 635 VE---KRQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDI 691
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM-AAFLD 497
Y+AL++A S QSA ++ ++M I Y ++ G R ++ AA L
Sbjct: 692 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA--RRGDVWEAADLI 749
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ ++ V+ H + S I A KAG + A +T+ M L +PN +TY +LI G+ A
Sbjct: 750 QQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARA 809
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFE----HNLVDAFL--YALVKGGFFDAVMQVVEK 611
L + E+K GIK + H L+ + L ++ + + VM + ++
Sbjct: 810 SLPEKALSCYEEMK-------AMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKE 862
Query: 612 SQEMKVFVD 620
E + VD
Sbjct: 863 MVEAGLIVD 871
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 128/306 (41%), Gaps = 10/306 (3%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+P+ + FG + Y +G + E M G + Y+SLI Y +++ A
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA-- 363
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
L C+ E + S TY +V GF + G+ + EA+++ + ++ S+
Sbjct: 364 --LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT---LNASIYG 418
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
II A ++A +++ EM G + +Y + Y + + +
Sbjct: 419 KIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKEC 478
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME-NHRPEL 491
G V Y LI A + R M+E + +Y ++ G ++
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
A F D V E + +V +N+II AFC G ++ A +T++ M L+ P +T++ +I
Sbjct: 539 FAVFEDMVKEGMKPDVIL--YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 552 NGYVTA 557
+GY +
Sbjct: 597 HGYAKS 602
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 145/337 (43%), Gaps = 14/337 (4%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A + + M + +RPN+ L +G VEL + E GF + +V ++LI
Sbjct: 507 ALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIH 566
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
G K GN++ A R + L G + K TY ++ G + G V+ L E K
Sbjct: 567 GLCKTGNMQEAVRLLKKMLERGFV----LDKITYNTLISGCCKEGKVEEGFKLRGEMVK- 621
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
GI D +I +G D+A ++ +E + + Y + YCK +
Sbjct: 622 --QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 679
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
E +L ++ + L+L+ Y+ LI A + + AF L DMR I +Y ++
Sbjct: 680 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 739
Query: 480 MTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+ G+ R E +DE+ ++ P V T ++I +CK G+++ L+ M
Sbjct: 740 IHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYT----ALIGGYCKLGQMDKVVNVLQEMS 795
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
PN TY +I+GY + + + HE+ K
Sbjct: 796 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 832
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 158/381 (41%), Gaps = 48/381 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++Y + A+ C G V DA ++ M LGV PN ++ L + G ++
Sbjct: 309 VSPDVYLFSTAINAFCKG-GKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEA 367
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ M + G ++ ++ YS LI+G +KL A+ + L G ++ Y
Sbjct: 368 FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTP----NEVVYNT 423
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G+ + GN+ + + ++ + P+ + ++ II +G ++A IL+E
Sbjct: 424 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLN-----SIIQGFCKIGQMEQAECILEE 478
Query: 394 MNACGCSVGLGVYVPTLK-----------------------------------AYCKEHR 418
M + G S+ G + + CKE +
Sbjct: 479 MLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGK 538
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
++A +L + G ++ +ALI + + Q A L + M E K +Y T
Sbjct: 539 HSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNT 598
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+++G + + E E+V+ +E T +N +IH C+ G+L++A
Sbjct: 599 LISGCCKEGKVEEGFKLRGEMVKQ-GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR 657
Query: 539 QFEPNDQTYLSLINGYVTAEQ 559
PN TY +I+GY A++
Sbjct: 658 DLVPNVYTYGVMIDGYCKADK 678
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 18/320 (5%)
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+ + F + G V+ L + +KL S VV + +I G D+A +
Sbjct: 316 FSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYN---NLIHGLCKHGNLDEAFRFKE 372
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M G + L Y + K + EA ++ + G + Y+ LI+
Sbjct: 373 KMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMG 432
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A + DM I + +I+ G + + E L+E++ + +
Sbjct: 433 NLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSR-GFSINPGAF 491
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+IIH C R E A R LR M+ PND +L+ G ++ + +W +
Sbjct: 492 TTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLE 551
Query: 573 KISTDGQKGIKFEHNLV--DAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFME 630
K F NLV +A ++ L K G +++++K E +DK Y
Sbjct: 552 K---------GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 602
Query: 631 NHKKLKVA---KLRKRNFKK 647
K+ KV KLR K+
Sbjct: 603 CCKEGKVEEGFKLRGEMVKQ 622
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P ++ + G C + + DA+ +I+ M G+ PN + L Y G +K+
Sbjct: 729 IPPTTATYSSLIHGMC-NIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKV 787
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V + M+ + + Y+ +I GY K G++++A++ + +G G + + TY
Sbjct: 788 VNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDT----VTYNV 843
Query: 336 VVKGFLQNGNVK 347
+ GF + G ++
Sbjct: 844 LTNGFCKEGKIE 855
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 170 KNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEG 229
K+R +P G ++D K K+F E L +NL+ N N +
Sbjct: 655 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTE----LLTQNLEL---NSVVYNTLIRA 707
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
C +V +A K+ + M G+ P +++ L + G E L M + G
Sbjct: 708 YCRNGNTV-EAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 766
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVK 347
+V Y++LI GY KLG ++ + M D +K TY ++ G+ ++G++K
Sbjct: 767 NVVCYTALIGGYCKLGQMDKVVNVL------QEMSSYDIHPNKITYTVMIDGYSKSGDMK 820
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
A L+ E + GIV D +V + +++
Sbjct: 821 TAAKLLHE---MVGKGIVPD-TVTYNVLT 845
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 90/234 (38%), Gaps = 18/234 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+ + N + G C + + +A + + PN ++G + Y +KI
Sbjct: 624 IEPDTFTYNLLIHGMCR-IGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCK---ADKI 679
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SK 330
E E L E V Y++LI Y + GN A + +M +
Sbjct: 680 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL------HDDMRSKGIPPTT 733
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY ++ G G ++ LI E +K G++ + +I LG DK ++
Sbjct: 734 ATYSSLIHGMCNIGRMEDAKCLIDEMRK---EGLLPNVVCYTALIGGYCKLGQMDKVVNV 790
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
L EM++ Y + Y K A +L+ ++ G+ D Y+ L
Sbjct: 791 LQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVL 844
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 114/542 (21%), Positives = 211/542 (38%), Gaps = 61/542 (11%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
N+ + T +H D A+K F+ + N P+ N+L LS L N + A+
Sbjct: 76 NVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL---LSGLCRNGLMDEAY 132
Query: 127 ASVVYVIEKN--PKLLDFQTVHTLLGSMRNANTAAPAF----------------ALVKCM 168
+ + E+ P + T+ L + A F L+ +
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192
Query: 169 FKNRYFMPFELWGGFLVDIC------RKNS---NFVAFLKVFEECCR----IALDENLDF 215
K G L + C R+NS + V F + + C+ + L+
Sbjct: 193 CKT----------GRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242
Query: 216 MK-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
M+ PN+ ++ ++G C Q V DA++V + M V G+ PN ++ L + + +
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQ-VRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 301
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
+ + L M G ++ Y++LI G K G A+R G+M+ +
Sbjct: 302 GVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF------GDMKAKFCNP 355
Query: 331 E--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
+ TY ++ GF + + L + K ++ D ++ N GL D A
Sbjct: 356 DVITYSCLIGGFCKLERIDMARTLFDDMLK---QAVLPDVVTFSTLVEGYCNAGLVDDAE 412
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+L+EM A CS + Y + +CK R EA +++ ++ G Q +V Y ALI+A
Sbjct: 413 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 472
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ A+ L +M + +Y +++ G E L+ + D +
Sbjct: 473 CRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKAD 532
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+ ++ C+ GR+ A L + P Y++LI G ++ + +
Sbjct: 533 MFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLE 592
Query: 569 EI 570
E+
Sbjct: 593 EM 594
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 12/279 (4%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLAN 351
Y+ LI+G+ K+ + A +LL M++S + TY V+ GF + V
Sbjct: 45 YNVLINGFCKVHKVHRAY--LLL----KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYK 98
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
L +++ +G + + ++S GL D+A+ +LDEM G Y +
Sbjct: 99 LF---RQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMA 155
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
CK + A ++ D S+ DV Y LI + A LF MRE
Sbjct: 156 GLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEP 215
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
++ +M GL + R + L E +ED ++S+I CK G++ DA+
Sbjct: 216 DVVTFTALMDGLCKGDRLQEAQQVL-ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 274
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+RMI EPN TY SLI+G+ S L++ E+
Sbjct: 275 FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 313
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 96/251 (38%), Gaps = 15/251 (5%)
Query: 65 QDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKR 124
+ N+ + + +H +TN D A + +TA P N+LI L R
Sbjct: 284 EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR 343
Query: 125 AFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFL 184
F + NP D T L+G A L M K + +
Sbjct: 344 LFGDMKAKF-CNP---DVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 399
Query: 185 VDICRKNSNFVAFL-KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
C N+ V ++ EE +A D P++Y + ++G C + + +A +V
Sbjct: 400 EGYC--NAGLVDDAERLLEE--MVASD-----CSPDVYTYTSLVDGFCK-VGRMVEARRV 449
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
++ M+ G +PN ++ L + G +L M G ++ Y SLI G+
Sbjct: 450 LKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCG 509
Query: 304 LGNLESASRTI 314
G+LE A + +
Sbjct: 510 TGDLEEARKML 520
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 76/201 (37%), Gaps = 43/201 (21%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ CK +R EAT + G + Y+ LI A+ L ++M+E
Sbjct: 14 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE--- 70
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+GL N VV ++++IH FC+ +++ A
Sbjct: 71 -----------SGLAPN------------VVT----------YSTVIHGFCRQTKVDTAY 97
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
+ R+M+ PN TY +L++G + E++ + G + KF +
Sbjct: 98 KLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRER----GLQPDKFSY--- 150
Query: 590 DAFLYALVKGGFFDAVMQVVE 610
D + L K G D ++V E
Sbjct: 151 DTLMAGLCKTGKIDMALKVFE 171
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 153/349 (43%), Gaps = 17/349 (4%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + P++ N + C Q + A ++E M G+RP+E +F L + + E
Sbjct: 193 DAVPPDVSTFNILIRALCKAHQ-LRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVE 251
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-- 331
+ ++ LM E G V + L++G K G +E A R I E+ F +
Sbjct: 252 GALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIY--------EEEGFCPDQV 303
Query: 332 TYCEVVKGFLQNGNVK-GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
T+ +V G + G++K GL + +K G +D +IS LG D+A I
Sbjct: 304 TFNALVNGLCRTGHIKQGLEMMDFMLEK----GFELDVYTYNSLISGLCKLGEIDEAVEI 359
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L M + C Y + CKE+ AT+L ++S G+ DV +++LI+
Sbjct: 360 LHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCL 419
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ + + A LF +M+E + +Y ++ L R + L E +E
Sbjct: 420 TSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKE-MELSGCARNVV 478
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+N++I CK R+ DA+ +M L + TY +LING +++
Sbjct: 479 VYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKR 527
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 135/307 (43%), Gaps = 8/307 (2%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G P++ +F L G ++ +E+ M E GF + Y+SLISG KLG ++ A
Sbjct: 297 GFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEA 356
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
IL + + E + TY ++ + +V+ L A+ L G++ D
Sbjct: 357 VE-ILHHMVSRDCEPNTV---TYNTLIGTLCKENHVEAATEL---ARVLTSKGVLPDVCT 409
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
+I + A + +EM GC Y +++ C E R EA L+ ++
Sbjct: 410 FNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEME 469
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
SG +V Y+ LI+ + A +F M + +Y T++ GL ++ R E
Sbjct: 470 LSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVE 529
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
A +D+++ + ++ + +++ FC+ G ++ A ++ M EP+ TY +L
Sbjct: 530 EAAQLMDQMIME-GLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTL 588
Query: 551 INGYVTA 557
I G A
Sbjct: 589 IGGLCKA 595
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 14/252 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL-AYLYALKGLQEKIV 276
P++ N+ ++G C + A ++ E M G P+E ++ L L + + L+E ++
Sbjct: 405 PDVCTFNSLIQGLCLT-SNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALM 463
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
L+ M G + +V Y++LI G K + A ME S+ TY
Sbjct: 464 LLKE-MELSGCARNVVVYNTLIDGLCKNNRVGDAEDIF------DQMEMLGVSRSSVTYN 516
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G ++ V+ A L+ ++ G+ D+ ++ G +A I+ M
Sbjct: 517 TLINGLCKSKRVEEAAQLM---DQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNM 573
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
GC + Y + CK R A++L+ + G+ L Y+ +I+A +
Sbjct: 574 TLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRT 633
Query: 455 QSAFSLFRDMRE 466
+ A LFR+M E
Sbjct: 634 KEAMRLFREMME 645
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 149/358 (41%), Gaps = 48/358 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP + N + G C VSDA +I+ M G +PNE ++G + + G +
Sbjct: 190 KPTLITLNTLVNGLCLN-GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
EL M E V YS +I G K G+L++A ME F + TY
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF------NEMEIKGFKADIITYN 302
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ GF G A L+ + K + S VV SV +I + V G +A +L EM
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV---LIDSFVKEGKLREADQLLKEM 359
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + Y + +CKE+R EA Q+V + S G D+ ++ LI +
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
LFR+M + G++ N T +N+
Sbjct: 420 DDGLELFREMS--------------LRGVIAN----------------------TVTYNT 443
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
++ FC++G+LE AK+ + M+ + P+ +Y L++G + L ++ +I++
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 109/287 (37%), Gaps = 47/287 (16%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
K +I N + G C D K++ M + PN +F L + +G +
Sbjct: 295 KADIITYNTLIGGFCNA-GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG--------NMEQSDF 328
+L M + G + + Y+SLI G+ K LE A + + L + G N+ + +
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 329 SKE-----------------------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV 365
K TY +V+GF Q+G ++ L E +
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE---------M 464
Query: 366 VDRSVGFGIISACVNL-GLSD-----KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
V R V I+S + L GL D KA I ++ + +G+Y+ + C +
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+A L + G++LD Y+ +I A LFR M E
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 139/316 (43%), Gaps = 12/316 (3%)
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
I+ MS G RP+ +F L G + +E+ +M + GF + Y+SLI G K
Sbjct: 304 IDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCK 363
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
LG +E A + M DFS T Y ++ + V+ L A+ L
Sbjct: 364 LGEVEEAVEIL------NQMILRDFSPNTVTYNTLISTLCKENQVEEATEL---ARVLTS 414
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
GI+ D +I A + +EM GC Y + + C R E
Sbjct: 415 KGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEE 474
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A L+ ++ SSG +V Y+ LI+ ++ + A +F +M I +Y T++
Sbjct: 475 ALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLID 534
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
GL +N R E A +D+++ + ++ +NS++ FC+AG ++ A ++ M E
Sbjct: 535 GLCKNRRVEEAAQLMDQMLME-GLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCE 593
Query: 542 PNDQTYLSLINGYVTA 557
P+ TY +LI G A
Sbjct: 594 PDSVTYGTLILGLSKA 609
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 140/352 (39%), Gaps = 41/352 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N+ ++G C + A ++ E M G P+E ++ L +G E+ +
Sbjct: 419 PDVCTFNSLIQGLCL-TNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALS 477
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA------------SRTIL--------LC 317
L M G S +V Y++LI G+ K +E A SR ++ LC
Sbjct: 478 LLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLC 537
Query: 318 -----------LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
+ ME K TY ++ F + G++K A+++ Q + +G
Sbjct: 538 KNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIV---QTMTSNGCEP 594
Query: 367 DRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
D SV +G +I G + A +L + G + Y P +KA +E RT+EA +L
Sbjct: 595 D-SVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRL 653
Query: 426 VMDISSSGLQLDVGNYDALIEASIT-SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
++ G D Y + + A +M + S+L + GL
Sbjct: 654 FREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLC 713
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+ + ++ V++ + S+I F K + +DA TL R++
Sbjct: 714 ALSMEDTLIKLVNRVMKQANF---SDSEVSMIMGFLKIRKFQDALATLGRIL 762
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 128/318 (40%), Gaps = 21/318 (6%)
Query: 82 NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLD 141
N +EA + + LT+ + P NSLI L L +NH L + +P D
Sbjct: 400 NQVEEATELARVLTSKGILPDVCTFNSLIQGL-CLTNNHRLAMELFEEMKTKGCHP---D 455
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
T + L+ S+ + A +L+K M + + + C+ K
Sbjct: 456 EFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKN--------KRI 507
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
EE I + L + N+ N ++G C + V +A ++++ M + G++P++ ++
Sbjct: 508 EEAEEIFDEMELQGISRNVVTYNTLIDGLCKN-RRVEEAAQLMDQMLMEGLKPDKFTYNS 566
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L + G +K ++ M G V Y +LI G K G +E ASR + G
Sbjct: 567 LLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKG 626
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE-AQKLEPSGIVVDRSVGFGIISACVN 380
+ + +TY V+K + L E +K +P V + V G+ S
Sbjct: 627 MV----LAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGP 682
Query: 381 LGLSDKAHSILDEMNACG 398
+G +A L EM G
Sbjct: 683 IG---EAVDFLVEMTDKG 697
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 165/426 (38%), Gaps = 67/426 (15%)
Query: 184 LVDICRKNSNFVAFLKVFEECCR-IALDENLDFMKPNI-----YACNAALEGCCYGLQSV 237
L+D K NFV ++EE R + D + M+ + C ++S
Sbjct: 91 LLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESY 150
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLY------ALKGLQEKIVEL-ESLMNEFGFSSQ 290
+ E E ++V+ + E A+ Y + G + K+VE+ S M G
Sbjct: 151 AKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPD 210
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
+ ++ LI + + A IL+ G+ S ++T+ +++GF++ GN+ G
Sbjct: 211 VTTFNILIKALCRAHQIRPA---ILMMEEMGSYGLSP-DEKTFTTLMQGFIEEGNMNG-- 264
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC---SVGLGVYV 407
A I ++M A GC +V + V V
Sbjct: 265 ------------------------------------ALRIREQMVAAGCPSSNVTVNVLV 288
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
YCKE R E + ++S+ G + D +++L+ + A + M +
Sbjct: 289 ---HGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQE 345
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+Y +++ GL + E L++++ T +N++I CK ++E+
Sbjct: 346 GFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILR-DFSPNTVTYNTLISTLCKENQVEE 404
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN 587
A R + P+ T+ SLI G + + ++ E+K T G +F +N
Sbjct: 405 ATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMK----TKGCHPDEFTYN 460
Query: 588 -LVDAF 592
L+D+
Sbjct: 461 MLIDSL 466
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 181/429 (42%), Gaps = 56/429 (13%)
Query: 233 GLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
G V+D +K V + + G P ++G L LY G K +E+ +M E G
Sbjct: 458 GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Query: 290 QMVFYSSLISGYVKLGNLESA-------------------SRTILLCLGGGNMEQS---- 326
+ YS +I+G+VKL + +A + I G GNM+++
Sbjct: 518 NLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTV 577
Query: 327 --------DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
+ T+ ++ G+ ++G+++ + + G V G+I+
Sbjct: 578 KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF---DMMRRCGCVPTVHTFNGLINGL 634
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
V +A ILDEM G S Y ++ Y T +A + + + GL +D+
Sbjct: 635 VE---KRQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDI 691
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM-AAFLD 497
Y+AL++A S QSA ++ ++M I Y ++ G R ++ AA L
Sbjct: 692 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA--RRGDVWEAADLI 749
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ ++ V+ H + S I A KAG + A +T+ M L +PN +TY +LI G+ A
Sbjct: 750 QQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARA 809
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFE----HNLVDAFL--YALVKGGFFDAVMQVVEK 611
L + E+K GIK + H L+ + L ++ + + VM + ++
Sbjct: 810 SLPEKALSCYEEMK-------AMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKE 862
Query: 612 SQEMKVFVD 620
E + VD
Sbjct: 863 MVEAGLIVD 871
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 127/303 (41%), Gaps = 10/303 (3%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+P+ + FG + Y +G + E M G + Y+SLI Y +++ A
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA-- 363
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
L C+ E + S TY +V GF + G+ + EA+++ + ++ S+
Sbjct: 364 --LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT---LNASIYG 418
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
II A ++A +++ EM G + +Y + Y + + +
Sbjct: 419 KIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKEC 478
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME-NHRPEL 491
G V Y LI A + R M+E + +Y ++ G ++
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
A F D V E + +V +N+II AFC G ++ A +T++ M L+ P +T++ +I
Sbjct: 539 FAVFEDMVKEGMKPDVIL--YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 552 NGY 554
+GY
Sbjct: 597 HGY 599
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 170/398 (42%), Gaps = 21/398 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ N ++ C Q + A ++E M G+ P+E +F + Y +G +
Sbjct: 185 IKPDVSTFNVLIKALCRAHQ-LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD--FSKE-T 332
+ + M EFG S V + ++ G+ K G +E A I M D F + T
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI------QEMSNQDGFFPDQYT 297
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+ +V G + G+VK ++ + G D +IS LG +A +LD
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIM---DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M CS Y + CKE++ EAT+L ++S G+ DV +++LI+ ++
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ + A LF +MR + +Y ++ L + + L + +E +
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ-MELSGCARSVITY 473
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
N++I FCKA + +A+ M N TY +LI+G + + + +
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ--- 530
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
+ +GQK K+ +N + L +GG +V+
Sbjct: 531 -MIMEGQKPDKYTYN---SLLTHFCRGGDIKKAADIVQ 564
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 119/292 (40%), Gaps = 22/292 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N+ ++G C ++ A ++ E M G P+E ++ L KG ++ +
Sbjct: 398 PDVCTFNSLIQGLCL-TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M G + ++ Y++LI G+ K A ME S+ TY
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF------DEMEVHGVSRNSVTYNT 510
Query: 336 VVKGFLQNGNVKGLANL----IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ G ++ V+ A L I+E QK D+ +++ G KA I+
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQK-------PDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
M + GC + Y + CK R A++L+ I G+ L Y+ +I+
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRK 623
Query: 452 QDFQSAFSLFRDMREARIYDLKG-SYLTIMTGLMENHRPELMAA-FLDEVVE 501
+ A +LFR+M E SY + GL P A FL E++E
Sbjct: 624 RKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 183/440 (41%), Gaps = 44/440 (10%)
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ---SVSDA 240
L+D R + A L++F NL KPN A E L S D
Sbjct: 53 LLDSLRSQPDDSAALRLF----------NLASKKPNFSPEPALYEEILLRLGRSGSFDDM 102
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE-LESLMNEFGFSSQMVFYSSLIS 299
+K++E M S+F L YA LQ++I+ ++ +++EFG FY+ +++
Sbjct: 103 KKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLN 162
Query: 300 GYVKLGNLESASRTILLCLGGGNME----QSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
V +L+ L+ + M + D S T+ ++K + L I+
Sbjct: 163 LLVDGNSLK------LVEISHAKMSVWGIKPDVS--TFNVLIKALCR---AHQLRPAILM 211
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS---VGLGVYVPTLKA 412
+ + G+V D ++ + G D A I ++M GCS V + V V
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV---HG 268
Query: 413 YCKEHRTAEATQLVMDISS-SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
+CKE R +A + ++S+ G D ++ L+ + + A + M +
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
+Y ++++GL + + LD+++ T +N++I CK ++E+A
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITR-DCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDA 591
R + P+ T+ SLI G + + ++ E++ K G + +F +N++
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK----GCEPDEFTYNML-- 441
Query: 592 FLYALVKGGFFDAVMQVVEK 611
+ +L G D + ++++
Sbjct: 442 -IDSLCSKGKLDEALNMLKQ 460
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 132/390 (33%), Gaps = 47/390 (12%)
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
E + L E D P++Y N+ + G C L V +A +V++ M PN ++ L
Sbjct: 316 EIMDVMLQEGYD---PDVYTYNSVISGLC-KLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ E+ EL ++ G + ++SLI G N A G
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG- 430
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
E +F TY ++ G + N++ +++E SG +I
Sbjct: 431 CEPDEF---TYNMLIDSLCSKGKLDEALNML---KQMELSGCARSVITYNTLIDGFCKAN 484
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL----------------- 425
+ +A I DEM G S Y + CK R +A QL
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 426 ------------------VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
V ++S+G + D+ Y LI + + A L R ++
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK-AGRLE 526
I +Y ++ GL + E++E + + C G +
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIR 664
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+A L ++ F P + L G +T
Sbjct: 665 EAVDFLVELLEKGFVPEFSSLYMLAEGLLT 694
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 124/310 (40%), Gaps = 23/310 (7%)
Query: 61 QTLTQD---NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQ 117
Q +T+D N + T + N +EA + + LT+ + P NSLI L L
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL-CLT 413
Query: 118 DNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPF 177
NH + + P D T + L+ S+ + A ++K M +
Sbjct: 414 RNHRVAMELFEEMRSKGCEP---DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 178 ELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSV 237
+ + C+ N A ++F+E + + N N ++G C + V
Sbjct: 471 ITYNTLIDGFCKANKTREAE-EIFDEM-------EVHGVSRNSVTYNTLIDGLCKS-RRV 521
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
DA ++++ M + G +P++ ++ L + G +K ++ M G +V Y +L
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL---II 354
ISG K G +E AS+ L M+ + + Y V++G + NL ++
Sbjct: 582 ISGLCKAGRVEVASKL----LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Query: 355 EAQKLEPSGI 364
E + P +
Sbjct: 638 EQNEAPPDAV 647
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 145/338 (42%), Gaps = 13/338 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++G C L+ +A + +M + G+ PN +F + G ++ E
Sbjct: 16 PNVVTYNTMIDGYC-KLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSE 74
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M+ G+ V Y++L++GY K GN A L L M ++ S TY
Sbjct: 75 VLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQA-----LVLHA-EMVRNGLSPNVVTYTS 128
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ + GN+ ++ G+ + II+ GL D+A+ +L+EM
Sbjct: 129 LINSMCKAGNLNRAMEFF---DQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT 185
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y + +C R EA L+ D+ G+ DV +Y +I +Q+
Sbjct: 186 RSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELD 245
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
AF + +M + +Y +++ GL E R E++ ++ + ++
Sbjct: 246 RAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLT-IKLPPDEFTYTTL 304
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
I+A+CK G L A MI F P+ TY LING
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLING 342
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/500 (19%), Positives = 193/500 (38%), Gaps = 73/500 (14%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKN--PKLLDFQT 144
+ FK + N P+ N++I L+ AF + + K P L+ F
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRT---DEAFGFLRSMGLKGLEPNLITFNM 58
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
+ + G R+ + LV+ + ++P E+ LV+ K NF L + E
Sbjct: 59 I--INGLCRDGRLKETSEVLVE--MSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEM 114
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
R L PN+ + + C +++ A + + M V G+ PNE ++ +
Sbjct: 115 VRNGL-------SPNVVTYTSLINSMCKA-GNLNRAMEFFDQMHVRGLCPNERTYTTIIN 166
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
+A +GL ++ + + M GF +V Y++LI+G+ LG +E A + +G G +
Sbjct: 167 GFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLP 226
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
+Y ++ GF +N Q+L+ + + +G ++ V
Sbjct: 227 DV----VSYSTIISGFARN-------------QELDRAFQMKVEMIGKSVLPDAV----- 264
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
Y ++ C++ R EA + ++ + L D Y L
Sbjct: 265 --------------------TYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE-----LMAAFLDE- 498
I A D A L +M + +Y ++ GL + R + L+ F D+
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDS 364
Query: 499 ----VVEDPRVE----VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
V + +E ++ +++ FC G +++A + MI +PN+ Y +
Sbjct: 365 IPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVI 424
Query: 551 INGYVTAEQYFSVLMMWHEI 570
I+G+ ++ E+
Sbjct: 425 IHGHCRIGNVLKAYKLYKEM 444
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N II+ C+ GRL++ L M + P++ TY +L+NGY + L++ E+
Sbjct: 56 FNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMV 115
Query: 572 R 572
R
Sbjct: 116 R 116
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 146/351 (41%), Gaps = 31/351 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP + N+ L+G + A +V M GV P+ SF L + G E+
Sbjct: 225 IKPGLVTYNSVLKGLLRNGRW-DKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEA 283
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ M + +V +S LI + + G ++ A+ + G M Y
Sbjct: 284 LRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVI----YTM 339
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII-----------SACVNLGLS 384
V+ GF + G L++EA + V D V FG + C LS
Sbjct: 340 VIGGFCRAG-------LMLEALR------VRDEMVAFGCLPDVVTYNTLLNGLCKERRLS 386
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D A +L+EM G L + + YC++ +A Q IS L+ D+ Y+ L
Sbjct: 387 D-AEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTL 445
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I+ D A L+ DM I+ +Y ++ E + + AFLDE+V
Sbjct: 446 IDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGI 505
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
V +NSII +C++G + ++ L +M + P+ TY +LI+GYV
Sbjct: 506 VP-NIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYV 555
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 189/466 (40%), Gaps = 54/466 (11%)
Query: 128 SVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDI 187
+V+ +EK D T + ++ + A A AL+ M + L +
Sbjct: 180 TVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGL 239
Query: 188 CRKNSNFVAFLKVFE--ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIE 245
R N + +VF + C +A P++ + N + G C + + +A + +
Sbjct: 240 LR-NGRWDKAREVFRAMDACGVA---------PDVRSFNMLIGGFCRAGE-LEEALRFYK 288
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M V P+ SF L L+ +G + E M EFG V Y+ +I G+ + G
Sbjct: 289 EMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAG 348
Query: 306 NLESASR------------------TIL--LCLGGGNMEQSDFSKE-----------TYC 334
+ A R T+L LC + + E T+
Sbjct: 349 LMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFT 408
Query: 335 EVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ G+ ++GN++ I Q+L P + + +I G KA+ + D
Sbjct: 409 TLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNT-----LIDGMCRQGDLGKANELWD 463
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M++ Y + ++C++ + A + ++ + G+ ++ Y+++I+ S
Sbjct: 464 DMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSG 523
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHD 511
+ MR ++ +Y T++ G ++ + + AF L +++E+ V+
Sbjct: 524 NVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK--MHEAFNLLKIMENENVQPDAVT 581
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+N II F G +++A ++M EP+ TY+S+ING+V A
Sbjct: 582 YNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVA 627
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 155/413 (37%), Gaps = 67/413 (16%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ-----EKIVELESLMNEFGFSSQM 291
V A +I++M G++P G + Y LKGL +K E+ M+ G + +
Sbjct: 210 VEAAMALIDSMVSKGIKP-----GLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDV 264
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLAN 351
++ LI G+ + G LE A R G + ++ ++ F + G + A
Sbjct: 265 RSFNMLIGGFCRAGELEEALRFYKEMRG----RRVTPDVVSFSCLIGLFTRRGEMDHAAE 320
Query: 352 LIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
+ E ++ L P G++ +G G A GL +A + DEM A GC + Y
Sbjct: 321 YLREMREFGLMPDGVIYTMVIG-GFCRA----GLMLEALRVRDEMVAFGCLPDVVTYNTL 375
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
L CKE R ++A +L+ ++ G+ D+ + LI + + A F + + R+
Sbjct: 376 LNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL 435
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
RP+++ +N++I C+ G L A
Sbjct: 436 ------------------RPDIVT------------------YNTLIDGMCRQGDLGKAN 459
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
M + PN TY LI+ + Q + E+ KGI
Sbjct: 460 ELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMV-------NKGIVPNIMTY 512
Query: 590 DAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRK 642
++ + + G Q + K + KV D Y H +K K+ +
Sbjct: 513 NSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLI---HGYVKEGKMHE 562
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 106/254 (41%), Gaps = 14/254 (5%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++ A G + A +++D M + G GL Y LK + R +A ++ + + G
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACG 259
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ DV +++ LI + + + A +++MR R+ S+ ++ + A
Sbjct: 260 VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAA 319
Query: 494 AFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+L E+ E P + + +I FC+AG + +A R M+ P+ TY +L
Sbjct: 320 EYLREMREFGLMPDGVI----YTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTL 375
Query: 551 INGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
+NG + + +E+K ++G+ + ++ + G + +Q +
Sbjct: 376 LNGLCKERRLSDAEELLNEMK-------ERGVPPDLCTFTTLIHGYCRDGNIEKALQFFD 428
Query: 611 KSQEMKVFVDKWKY 624
+ ++ D Y
Sbjct: 429 TISDQRLRPDIVTY 442
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 157/374 (41%), Gaps = 40/374 (10%)
Query: 233 GLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
G + + EK V + + G P+ S+G L LY G K +++ +M G
Sbjct: 423 GYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKH 482
Query: 290 QMVFYSSLISGYVKLGNLESA-------------------SRTILLCLGGGNMEQS---- 326
M YS LI+G++KL + +A + I G NM+++
Sbjct: 483 NMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMV 542
Query: 327 -DFSKE-------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
KE T+ ++ GF + G ++ + + SG + +I
Sbjct: 543 KQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIF---DMMRRSGCIPTVHTYNALILGL 599
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
V KA +ILD+MN G Y ++ Y T +A Q + + GL++DV
Sbjct: 600 VEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDV 659
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM-AAFLD 497
Y+AL+++ S QSA ++ ++M I Y ++ G R ++ AA L
Sbjct: 660 YTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWAR--RGDVWEAADLM 717
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ + V H + S ++A CKAG ++ A ++ M +PN +TY +LING+ A
Sbjct: 718 QQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARA 777
Query: 558 EQYFSVLMMWHEIK 571
L + E+K
Sbjct: 778 SMPEKALSCFEEMK 791
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 162/416 (38%), Gaps = 68/416 (16%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A + E+M G+ P+ + L + YA+ E+ + M E G +V YS ++
Sbjct: 293 ARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVG 352
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
G+ K+G ++A + + TY ++ Q N+ L+ E +
Sbjct: 353 GFAKMGKADAADH----WFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVRE---M 405
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
E GI + ++ +G +K + D + CG S + Y + Y K +
Sbjct: 406 EVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKV 465
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD---LKGSY 476
++A Q+ + SG++ ++ Y LI + +D+ +AFS+F D + + L +
Sbjct: 466 SKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNI 525
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA-------- 528
+T G+ R A + + ++ R T + IIH F +AG + A
Sbjct: 526 ITAFCGMSNMDR----AICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMR 581
Query: 529 --------------------KRTLRRMIFL-------QFEPNDQTYLSLINGYVT----- 556
KR + + + + PN+ TY +L+ GY +
Sbjct: 582 RSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTE 641
Query: 557 -AEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
A QYFSVL +G++ + +A L + K G + + V ++
Sbjct: 642 KAFQYFSVLR-------------NEGLEIDVYTYEALLKSCCKSGRMQSALAVTKE 684
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 158/379 (41%), Gaps = 18/379 (4%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AE ++ M V G+ + + Y + G +EK + + + E GFS ++ Y LI+
Sbjct: 398 AEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLIN 457
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
Y K+G + A + + M + +TY ++ GFL+ +K AN +
Sbjct: 458 LYTKIGKVSKALQISKMM----KMSGIKHNMKTYSMLINGFLK---LKDWANAFSVFEDF 510
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
G+ D + II+A + D+A ++ +M ++P + + +
Sbjct: 511 TKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEM 570
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A ++ + SG V Y+ALI + + A ++ M A + + +Y T+
Sbjct: 571 RRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTL 630
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
M G E + V+ + +E+ + + +++ + CK+GR++ A + M
Sbjct: 631 MQGYASLGDTEKAFQYFS-VLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKN 689
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKG 599
N Y LI+G+ + + ++++ +G+ + + +F+ A K
Sbjct: 690 IPRNTFVYNILIDGWARRGDVWEAADLMQQMRK-------EGVLPDIHTYTSFVNACCKA 742
Query: 600 GFFDAVMQVVEKSQEMKVF 618
G +++ QEM+ F
Sbjct: 743 GDMQKATEII---QEMEAF 758
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 146/359 (40%), Gaps = 76/359 (21%)
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRY------FMPFELWGGFLVDICRK 190
P ++ + + T M N + A +VK M K RY F+P
Sbjct: 517 PDVVLYNNIITAFCGMSNMDRA---ICMVKQMQKERYRPTTRTFLPI------------- 560
Query: 191 NSNFVAFLKVFEECCRIALDENLDFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIE 245
F + E R AL E D M+ P ++ NA + G + ++ A +++
Sbjct: 561 ---IHGFARAGE--MRRAL-EIFDMMRRSGCIPTVHTYNALILGLVEK-RKMAKAVAILD 613
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M+V GV PNE ++ L YA G EK + S++ G + Y +L+ K G
Sbjct: 614 QMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSG 673
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV 365
++SA + + N+ ++ F Y ++ G+ + G+V A+L+ Q++ G++
Sbjct: 674 RMQSA-LAVTKEMSAKNIPRNTF---VYNILIDGWARRGDVWEAADLM---QQMRKEGVL 726
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
D H+ +NAC CK +AT++
Sbjct: 727 PD-------------------IHTYTSFVNAC----------------CKAGDMQKATEI 751
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
+ ++ + G++ ++ Y LI + + A S F +M+ A + K +Y +MT L+
Sbjct: 752 IQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTSLL 810
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 121/540 (22%), Positives = 218/540 (40%), Gaps = 81/540 (15%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVV------------YVI 133
EA+++F+ L + + +N+L+A LS H + A+ V+ ++
Sbjct: 105 EAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMV 164
Query: 134 EKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSN 193
K L+F T++ M +C+F P + L+D + +
Sbjct: 165 HSYCKTLEFDGADTVISEMEK-----------RCVF------PDVVTHNVLIDARFRAGD 207
Query: 194 FVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR 253
A + + + L KP I N+ L+G C + A++V TM V
Sbjct: 208 VDAAIALVDSMANRGL-------KPGIVTYNSVLKGLCKH-RRFDKAKEVFRTMDQCSVA 259
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT 313
P+ SF L + G ++ V+ M + +V +S LI + + G ++ A
Sbjct: 260 PDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAY 319
Query: 314 ILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG 373
+ G G + Y V+ GF + G++ EA + V D VGFG
Sbjct: 320 LREMKGLGLVPDG----VIYTMVIGGFCRAGSMS-------EALR------VRDEMVGFG 362
Query: 374 IISACVNL-----GLSDKAHSILD------EMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
+ V GL K H +LD EM G + L + + YC++ A
Sbjct: 363 CLPDVVTYNTLLNGLC-KQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENA 421
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
QL + L+ DV Y++LI+ D A L+ DM I +Y ++
Sbjct: 422 LQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDS 481
Query: 483 LMENHRPELMAAFLDEVVEDPRV-EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
E + E FLDE+V+ + ++T +NSII +C++G ++ ++ L++M
Sbjct: 482 HCEKGQVEDAFGFLDEMVKKGNLPNIRT--YNSIIKGYCRSGNVKKGQQFLQKMRQDNVF 539
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
P+ T+ +LI+GY+ E +++ +++++ DA Y ++ GF
Sbjct: 540 PDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRP------------DAVTYNMIINGF 587
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 127/595 (21%), Positives = 237/595 (39%), Gaps = 70/595 (11%)
Query: 1 MWWRKEASFMLIRKKFFCSSSSTSPETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQ 60
M R+ AS R++ S ++SP TP QP +F L ++ Q P + +
Sbjct: 63 MSRRRGAS----RREIVSSLLASSP-TP------QPQVFDLLIRTYTQS--RKPREAFEA 109
Query: 61 QTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNH 120
L D+ + + +LL + W + S N+ ++
Sbjct: 110 FRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCK 169
Query: 121 NLKRAFA-SVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMP-FE 178
L+ A +V+ +EK D T + L+ + A A ALV M NR P
Sbjct: 170 TLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM-ANRGLKPGIV 228
Query: 179 LWGGFLVDICRKNSNFVAFLKVFE--ECCRIALDENLDFMKPNIYACNAALEGCCYGLQS 236
+ L +C K+ F +VF + C +A P++ + N + G C +
Sbjct: 229 TYNSVLKGLC-KHRRFDKAKEVFRTMDQCSVA---------PDVRSFNILIGGFCR-VGE 277
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V +A K + M V P+ SF L L++ +G + M G V Y+
Sbjct: 278 VKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTM 337
Query: 297 LISGYVKLGNLESASRTILLCLGGG-----------------------------NMEQSD 327
+I G+ + G++ A R +G G ME+
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERG 397
Query: 328 FSKE--TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ + T+ ++ G+ + GN + L + Q+L P + + +I G
Sbjct: 398 VTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYN-----SLIDGMCRKGD 452
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
KA+ + D+M+A Y + ++C++ + +A + ++ G ++ Y++
Sbjct: 453 LAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNS 512
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVED 502
+I+ S + + + MR+ ++ ++ T++ G ++ + AF + ++E
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEE--NMHGAFNVFNIMEK 570
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
V +N II+ F + G ++DA R + M EP+ TY+SLING+VTA
Sbjct: 571 EMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTA 625
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 67/250 (26%)
Query: 188 CRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETM 247
CR+ NF L++F+ R L +P++ N+ ++G C ++ A ++ + M
Sbjct: 413 CRQ-GNFENALQLFDTLLRQRL-------RPDVVTYNSLIDGMCRK-GDLAKANELWDDM 463
Query: 248 SVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV---------FYSSLI 298
+ PN ++ L + KG E + FGF +MV Y+S+I
Sbjct: 464 HAREILPNHITYSILIDSHCEKGQVE---------DAFGFLDEMVKKGNLPNIRTYNSII 514
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANL--II 354
GY + GN++ + + M Q + + T+ ++ G+++ N+ G N+ I+
Sbjct: 515 KGYCRSGNVKKGQQFLQ------KMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIM 568
Query: 355 EAQKLEP------------------------------SGIVVDRSVGFGIISACVNLGLS 384
E + + P SGI DR +I+ V G S
Sbjct: 569 EKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNS 628
Query: 385 DKAHSILDEM 394
+A + DEM
Sbjct: 629 KQAFQLHDEM 638
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 161/388 (41%), Gaps = 44/388 (11%)
Query: 198 LKVFE---ECCRIALDENLDFMKPNI--YACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
L VFE ECC P+I Y C L + V+ A + + M G+
Sbjct: 429 LIVFERLKECC----------FTPSIISYGC---LINLYIKIGKVTKAIAISKEMESYGI 475
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEF---------GFSSQMVFYSSLISGYVK 303
+ N ++ L + G + L N F G Y+ LI + K
Sbjct: 476 KHNNKTYSML-----ISGF----IHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCK 526
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
+GN++ A R IL + M+ S+ + +++GF G++K N++ + SG
Sbjct: 527 MGNMDRAIR-ILEKMQKERMQPSN---RAFRPIIEGFAVAGDMKRALNIL---DLMRRSG 579
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+I + ++A S+L++M+ G + Y ++ Y +A
Sbjct: 580 CAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAF 639
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+ I GL+LDV Y+ L+ A S QSA ++ R+M +I Y ++ G
Sbjct: 640 EYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGW 699
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
A + ++ ED V H + S I+A CKAG ++ A++ + M + +PN
Sbjct: 700 ARRGDVWEAADLMKQMKEDG-VPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPN 758
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+TY +LI G+ A L + E+K
Sbjct: 759 LKTYTTLIKGWAKASLPDRALKSFEEMK 786
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 154/417 (36%), Gaps = 44/417 (10%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A E M G+ PN F L + YA+ ++ M G +V YS +I+
Sbjct: 288 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIA 347
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK- 358
G+ K+ + +SA + D + Y ++ Q+GN+ L+ E ++
Sbjct: 348 GFAKINDAQSADN----LFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEED 403
Query: 359 ------------LEPSGIVVDRS------------------VGFG-IISACVNLGLSDKA 387
+ I+ D + +G +I+ + +G KA
Sbjct: 404 GIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKA 463
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+I EM + G Y + + H A A + ++ SGLQ D Y+ LIEA
Sbjct: 464 IAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEA 523
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ A + M++ R+ ++ I+ G + LD ++
Sbjct: 524 FCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILD-LMRRSGCAP 582
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N++IH K ++E A L +M PN+ TY ++ GY +
Sbjct: 583 TVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYF 642
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+IK + G+K + + + L A K G + + V + K+ + + Y
Sbjct: 643 TKIK-------EGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVY 692
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 146/365 (40%), Gaps = 81/365 (22%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
G +VFY+ +I GY K G+L+ A+RT L M+ + ETY ++ GF + G
Sbjct: 231 GCVPHVVFYNMIIDGYCKKGDLQCATRT----LKELKMKGVLPTVETYGALINGFCKAGE 286
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
+ + L+ E + G+ ++ V +I A GL KA + M GC +
Sbjct: 287 FEAVDQLLTE---MAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITT 343
Query: 406 Y-----------------------------------VPTLKAYCKEHRTAEATQLVMDIS 430
Y P + AYCK+ +A ++ I+
Sbjct: 344 YNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIA 403
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-- 488
G + D+ +Y A I + + A + M E ++ Y +M+GL +N R
Sbjct: 404 EIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFP 463
Query: 489 ---------------PE------LMAAF-----LDEVVEDPRVEVKTH------DWNSII 516
P+ LM F LDE ++ +V ++ +N++I
Sbjct: 464 AMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMI 523
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL-----MMWHEIK 571
FCK G++ DA L +M + P++ TY ++I+GYV S L MM H+ K
Sbjct: 524 KGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFK 583
Query: 572 RKIST 576
+ T
Sbjct: 584 PNVIT 588
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 139/342 (40%), Gaps = 21/342 (6%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I N + C G + +A++ +E G+ PN+ S+ L + Y +G K
Sbjct: 339 PDITTYNTMINFSCKG-GRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAG 397
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF-SKETYCEV 336
+ + E G +V Y + I G V G ++ A L + ME+ F + Y +
Sbjct: 398 MLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVA-----LMVREKMMEKGVFPDAQIYNVL 452
Query: 337 VKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+ G +NG + L+ E + ++P D V ++ + G D+A I +
Sbjct: 453 MSGLCKNGRFPAMKLLLSEMLDRNVQP-----DVYVFATLMDGFIRNGELDEAIKIFKVI 507
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G G+ Y +K +CK + +A + + + D Y +I+ + D
Sbjct: 508 IRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDM 567
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENH---RPELMAAFLDEVVEDPRVEVKTHD 511
SA +F M + + +Y +++ G + R E + + P V
Sbjct: 568 SSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVT---- 623
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ +++ F KAG+ E A M+ PND T+ LING
Sbjct: 624 YTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLING 665
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 151/398 (37%), Gaps = 69/398 (17%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS-SL 297
+ E V+E M ++P +F L Y G ++ ++L + E V S SL
Sbjct: 109 EIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSL 168
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
++G VK G ++ A + M Q+D
Sbjct: 169 LNGLVKSGKVDVALQLY------DKMLQTD------------------------------ 192
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ +G VVD ++ NLG ++ ++ + GC + Y + YCK+
Sbjct: 193 --DGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKG 250
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR--------- 468
AT+ + ++ G+ V Y ALI + +F++ L +M AR
Sbjct: 251 DLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEM-AARGLNMNVKVF 309
Query: 469 --IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
+ D + Y ++T E R + E+ P + +N++I+ CK GR++
Sbjct: 310 NNVIDAEFKY-GLVTKAAETMRR------MAEMGCGPDITT----YNTMINFSCKGGRIK 358
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEH 586
+A L + PN +Y L++ Y Y M +I+ G+K +
Sbjct: 359 EADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLF----RIAEIGEKPDLVSY 414
Query: 587 NLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
AF++ +V G D + V EK E VF D Y
Sbjct: 415 G---AFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIY 449
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 177/442 (40%), Gaps = 59/442 (13%)
Query: 232 YGLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFS 288
+G V D +K V E + G +P S+G L LY G K + + M G
Sbjct: 399 HGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIK 458
Query: 289 SQMVFYSSLISGYVKLGNLESA--------------SRTILLCL-----GGGNM------ 323
YS LI+G++ L + +A R I L GNM
Sbjct: 459 HNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRI 518
Query: 324 ------EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
E+ S T+ +++GF G++K + + + SG +I
Sbjct: 519 FERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTL---DLMRRSGCAPTVMTYNALIHG 575
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
V +KA S+LD+M+ G + Y ++ Y +A + I SGL+LD
Sbjct: 576 LVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLD 635
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
V Y+ L+ A S QSA ++ R+M +I Y ++ G A L
Sbjct: 636 VYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLK 695
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
++ ED + H + S I+A CKAG ++ A+ ++ M + +PN +T+ +LI G+
Sbjct: 696 QMKEDG-IPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARV 754
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFE----HNLVDAFL--YALVKGGFFDAVMQVVEK 611
L + E+K G+K + H LV + L +++G + + V +
Sbjct: 755 SLPDRALKCFEEMK-------SAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGIFSVCRE 807
Query: 612 SQEMKVFVD--------KWKYK 625
E + VD KW +K
Sbjct: 808 MFENDLTVDLRTAVHWSKWLHK 829
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 123/318 (38%), Gaps = 43/318 (13%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A E M G+ PN F L + YA+ G + M G +V YS LIS
Sbjct: 270 ARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILIS 329
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
GY K + +SA + + + Y ++ Q+GN+ L+ E +
Sbjct: 330 GYGKTNDAQSADN----LFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVRE---M 382
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
E GI V ++ + K + + + CG + Y + Y K +
Sbjct: 383 EEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKV 442
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
+A + ++ S G++ + Y LI I DF +AFS+F DM I
Sbjct: 443 PKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDM--------------I 488
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+GL D + +N ++ AFCK G ++ A R RM +
Sbjct: 489 KSGLQP-----------DRAI-----------YNLLVEAFCKMGNMDRAIRIFERMQKER 526
Query: 540 FEPNDQTYLSLINGYVTA 557
+P+++T+ +I G+ A
Sbjct: 527 MQPSNRTFRPIIEGFAVA 544
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/365 (16%), Positives = 132/365 (36%), Gaps = 85/365 (23%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+P+ FG + YA +G + M G ++SL+ Y G++ A
Sbjct: 248 KPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGA-- 305
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
L C+ E + + TY ++ G+ + + + NL EA+
Sbjct: 306 --LSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAK--------------- 348
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
+ LD +N +Y + A+C+ A +LV ++
Sbjct: 349 ----------------TKLDNLNGI-------IYSNIIHAHCQSGNMDRAEELVREMEED 385
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G+ + Y +++ QD + +F ++E G TI++
Sbjct: 386 GIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKEC------GFKPTIIS----------- 428
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+ +I+ + K G++ A + M + N++TY LIN
Sbjct: 429 -------------------YGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLIN 469
Query: 553 GYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
G++ + + ++ ++ + G++ + + + + A K G D +++ E+
Sbjct: 470 GFIHLHDFANAFSIFEDMIK-------SGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERM 522
Query: 613 QEMKV 617
Q+ ++
Sbjct: 523 QKERM 527
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 145/337 (43%), Gaps = 14/337 (4%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A + + M + +RPN+ L +G VEL + E GF + +V ++LI
Sbjct: 440 ALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIH 499
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
G K GN++ A R + L G + K TY ++ G + G V+ L E K
Sbjct: 500 GLCKTGNMQEAVRLLKKMLERGFV----LDKITYNTLISGCCKEGKVEEGFKLRGEMVK- 554
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
GI D +I +G D+A ++ +E + + Y + YCK +
Sbjct: 555 --QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 612
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
E +L ++ + L+L+ Y+ LI A + + AF L DMR I +Y ++
Sbjct: 613 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 672
Query: 480 MTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+ G+ R E +DE+ ++ P V + ++I +CK G+++ L+ M
Sbjct: 673 IHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC----YTALIGGYCKLGQMDKVVNVLQEMS 728
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
PN TY +I+GY + + + HE+ K
Sbjct: 729 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 765
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 158/381 (41%), Gaps = 48/381 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++Y + A+ C G V DA ++ M LGV PN ++ L + G ++
Sbjct: 242 VSPDVYLFSTAINAFCKG-GKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEA 300
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ M + G ++ ++ YS LI+G +KL A+ + L G ++ Y
Sbjct: 301 FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTP----NEVVYNT 356
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G+ + GN+ + + ++ + P+ + ++ II +G ++A IL+E
Sbjct: 357 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLN-----SIIQGFCKIGQMEQAECILEE 411
Query: 394 MNACGCSVGLGVYVPTLK-----------------------------------AYCKEHR 418
M + G S+ G + + CKE +
Sbjct: 412 MLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGK 471
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
++A +L + G ++ +ALI + + Q A L + M E K +Y T
Sbjct: 472 HSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNT 531
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+++G + + E E+V+ +E T +N +IH C+ G+L++A
Sbjct: 532 LISGCCKEGKVEEGFKLRGEMVKQ-GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR 590
Query: 539 QFEPNDQTYLSLINGYVTAEQ 559
PN TY +I+GY A++
Sbjct: 591 DLVPNVYTYGVMIDGYCKADK 611
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 18/320 (5%)
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+ + F + G V+ L + +KL S VV + +I G D+A +
Sbjct: 249 FSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYN---NLIHGLCKHGNLDEAFRFKE 305
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M G + L Y + K + EA ++ + G + Y+ LI+
Sbjct: 306 KMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMG 365
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A + DM I + +I+ G + + E L+E++ + +
Sbjct: 366 NLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSR-GFSINPGAF 424
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+IIH C R E A R LR M+ PND +L+ G ++ + +W +
Sbjct: 425 TTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLE 484
Query: 573 KISTDGQKGIKFEHNLV--DAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFME 630
K F NLV +A ++ L K G +++++K E +DK Y
Sbjct: 485 K---------GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 535
Query: 631 NHKKLKVA---KLRKRNFKK 647
K+ KV KLR K+
Sbjct: 536 CCKEGKVEEGFKLRGEMVKQ 555
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 104/280 (37%), Gaps = 54/280 (19%)
Query: 170 KNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEG 229
K+R +P G ++D K K+F E L +NL+ N N +
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTE----LLTQNLEL---NSVVYNTLIRA 640
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
C +V +A K+ + M G+ P +++ L + G E L M + G
Sbjct: 641 YCRNGNTV-EAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 699
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVK 347
+V Y++LI GY KLG ++ + M D +K TY ++ G+ ++G++K
Sbjct: 700 NVVCYTALIGGYCKLGQMDKVVNVL------QEMSSYDIHPNKITYTVMIDGYSKSGDMK 753
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
A L+ E VG GI+ V Y
Sbjct: 754 TAAKLLHEM-------------VGKGIVPDTV-------------------------TYN 775
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+CKE + E ++ +S GL LD Y L+
Sbjct: 776 VLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 103/272 (37%), Gaps = 18/272 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+ + N + G C + + +A + + PN ++G + Y +KI
Sbjct: 557 IEPDTFTYNLLIHGMCR-IGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCK---ADKI 612
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SK 330
E E L E V Y++LI Y + GN A + +M +
Sbjct: 613 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL------HDDMRSKGIPPTT 666
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY ++ G G ++ LI E +K G++ + +I LG DK ++
Sbjct: 667 ATYSSLIHGMCNIGRMEDAKCLIDEMRK---EGLLPNVVCYTALIGGYCKLGQMDKVVNV 723
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L EM++ Y + Y K A +L+ ++ G+ D Y+ L
Sbjct: 724 LQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 783
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+ F + M + + + +Y T++ G
Sbjct: 784 EGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 148/358 (41%), Gaps = 28/358 (7%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
ENL +KPN+ N + G C V A V++ M GV P+ ++G L G
Sbjct: 263 ENLG-VKPNVVTYNTVIHGYC-SRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGG 320
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL--------ESASRTILLCLGGGN 322
E+ + M E G V Y++LI GY G+L E R IL +
Sbjct: 321 KLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTV---- 376
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNL 381
TY ++ G + +I + + SGIV D S+ + I I+
Sbjct: 377 --------STYNLLIHALFLEGKMDEADGMI---KDMGDSGIVPD-SITYNILINGYCRC 424
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G + KA ++ DEM + G L Y + K +R A L I G D+ +
Sbjct: 425 GNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMF 484
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ALI+ + + AF+L ++M + I + +Y T+M G + E L E ++
Sbjct: 485 NALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKE-MK 543
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ +N++I + K G + DA M+ + F P TY +LI G +Q
Sbjct: 544 RRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQ 601
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVEL-ESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G++P ++ L Y+ + + + +L E ++ E G S ++ +++LI G+ GNL+
Sbjct: 441 GIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE-GASPDLIMFNALIDGHCANGNLDR 499
Query: 310 ASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A + M++ + + TY +++G + G V+ L+ E ++ GI D
Sbjct: 500 AFALL------KEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKR---RGIRPD 550
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+IS G + A +I DEM + G + L Y ++ CK + A +L+
Sbjct: 551 HISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLK 610
Query: 428 DISSSGLQLDVGNYDALIEA 447
++ S G+ D Y +LIE
Sbjct: 611 EMVSKGITPDDSTYFSLIEG 630
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
+D LI A + AF F M+E + ++ +++ ++ ++ E + E+
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228
Query: 501 EDPRVEVKT--HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
R+++K+ + +N +I+ CK G+L+ AK + M L +PN TY ++I+GY +
Sbjct: 229 ---RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRG 285
Query: 559 QYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVF 618
+ M+ +K +G++ + + + + KGG + ++EK +E+ +
Sbjct: 286 RVEGARMVLDIMK-------NRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLL 338
Query: 619 VDKWKY 624
Y
Sbjct: 339 PTAVTY 344
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 96/247 (38%), Gaps = 7/247 (2%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ +A+ +I+ M G+ P+ ++ L Y G +K L M G +V Y+S
Sbjct: 392 MDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTS 451
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
LI K +++A + G D + ++ G NGN+ L+ E
Sbjct: 452 LIYVLSKRNRMKAADDLFEKIIREG--ASPDLI--MFNALIDGHCANGNLDRAFALLKEM 507
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
K IV D ++ G ++A +L EM G Y + Y K
Sbjct: 508 DK---RNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKR 564
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+A + ++ S G + Y+ALI+ +Q A L ++M I +Y
Sbjct: 565 GDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTY 624
Query: 477 LTIMTGL 483
+++ G+
Sbjct: 625 FSLIEGI 631
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 157/355 (44%), Gaps = 14/355 (3%)
Query: 207 IALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYL 265
I L E L +KPN+ N + G C V A + + M GV+P+ ++G F++ +
Sbjct: 214 IGLMEALG-IKPNVVTYNTIIHGYC-SRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGM 271
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
L+E LE M E G V Y++LI GY GNLE A + G M
Sbjct: 272 CKEGKLEEASGMLEK-MKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMP- 329
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNLGLS 384
+ TY ++ + + +I E + G+V D SV + I I+ G
Sbjct: 330 ---TVSTYNMLIHALFLDCKMDEADGIIKE---MSEKGLVPD-SVTYNILINGYCRCGNV 382
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
KA ++ DEM + G Y + K R +A L I G+ D+ ++AL
Sbjct: 383 KKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNAL 442
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I+ + + AF++ ++M + ++ + ++ T+M G + E ++E ++
Sbjct: 443 IDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEE-MKSRG 501
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
++ +N++I + K G ++DA R M+ + F P TY +LI G E+
Sbjct: 502 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEE 556
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
YD LI A + AF F M+ + + +++ ++++R E E+
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
R++ +N +I+ CK G+L+ AK + M L +PN TY ++I+GY + +
Sbjct: 184 R-MRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRV 242
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEM 615
M++ +K +G+K + +F+ + K G + ++EK +E+
Sbjct: 243 EGARMIFDLMK-------CRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEI 290
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 120/541 (22%), Positives = 215/541 (39%), Gaps = 71/541 (13%)
Query: 82 NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL--------------QDNHNLKRAFA 127
N DEA+K K + A + P+K ++L+ L + +D+H
Sbjct: 236 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD---- 291
Query: 128 SVVY--VIEKNPKLLDFQTVHTLLGSMRNANTAAPAFA-------------------LVK 166
++ Y +IE + + + + LL M NA + + L++
Sbjct: 292 TITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 351
Query: 167 CM----FKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYA 222
M K F+ L G+ CR+ + +A ++F++ ++ + P++Y
Sbjct: 352 EMTTKGLKPNAFVYAPLISGY----CREGNVSLA-CEIFDKMTKVNV-------LPDLYC 399
Query: 223 CNAALEGCCYGLQSVSDAE---KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELE 279
N+ + +GL V E K M G+ PNE ++ L + Y G E +L
Sbjct: 400 YNSLI----FGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV 455
Query: 280 SLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKG 339
M + G V Y L+ Y K ++E S T L G M Y ++
Sbjct: 456 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVM----LDNRIYGILIHN 511
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
+GN++ ++ E +K +G V D V +IS +KA ILDEM+ G
Sbjct: 512 LSSSGNMEAAFRVLSEIEK---NGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGV 568
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
+ Y + CK + A + I + GL + Y +LI+ S D +AF
Sbjct: 569 DPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFY 628
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAF 519
L+ +M I Y + TG E ++E+ R +N+++ F
Sbjct: 629 LYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFL--RGHASISSFNNLVDGF 686
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQ 579
CK G++++ + L ++ PN T ++I+G A + V ++ E+++K S
Sbjct: 687 CKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAA 746
Query: 580 K 580
+
Sbjct: 747 R 747
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 152/389 (39%), Gaps = 72/389 (18%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL--AYLYALKGLQE 273
+ P+I CNA L+ +++ KV E M G+ P+ ++ L AY +
Sbjct: 78 LAPSIRCCNALLKDLLRA-DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTA 136
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK--E 331
K V +E M E G V Y+ LI+G LC G E F K E
Sbjct: 137 KKVLVE--MRERGCGLNTVTYNVLIAG---------------LCRSGAVEEAFGFKKDME 179
Query: 332 TYCEVVKGFLQNGNVKGL--------ANLIIE---AQKLEPSGIVVDRSVGFGIISACVN 380
Y V GF + GL A +++ +L+P+ +V +I +
Sbjct: 180 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN-----LIDGFMR 234
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G +D+A ++ EM A G Y ++ CK + A+ L+ + + D
Sbjct: 235 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 294
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV- 499
Y+ +IE + + AF L +M A I +Y ++ GL ++ PE + L+E+
Sbjct: 295 YNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 354
Query: 500 -----------------------------VEDPRVEVKT----HDWNSIIHAFCKAGRLE 526
+ D +V + +NS+I K GR+E
Sbjct: 355 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 414
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++ + +M PN+ TY LI+GY+
Sbjct: 415 ESTKYFAQMQERGLLPNEFTYSGLIHGYL 443
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 162/419 (38%), Gaps = 56/419 (13%)
Query: 193 NFVAFLKVFEECCRI-ALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKV 243
N V + + CR A++E F K P+ + A + G C +S ++A+ +
Sbjct: 151 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRS-NEAKAL 209
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
++ MS ++PN + L + +G ++ ++ M G + Y +L+ G K
Sbjct: 210 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 269
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
+G ++ AS L L + TY +++G ++ N K L+ E + S
Sbjct: 270 MGQMDRAS----LLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISP 325
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH------ 417
V S+ +I G +KA +L+EM G VY P + YC+E
Sbjct: 326 NVYTYSI---MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 382
Query: 418 -----------------------------RTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
R E+T+ + GL + Y LI
Sbjct: 383 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 442
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ + D +SA L + M + + Y+ ++ ++ E +++ ++ D V +
Sbjct: 443 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML-DQGVMLD 501
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA---EQYFSVL 564
+ +IH +G +E A R L + P+ Y SLI+G E+ F +L
Sbjct: 502 NRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 560
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 102/512 (19%), Positives = 182/512 (35%), Gaps = 85/512 (16%)
Query: 28 PSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEA 87
P LY + IF L + ++ Q Q++ L N + +H L + + A
Sbjct: 395 PDLYCY-NSLIFGLSKVGRVEESTKYFAQMQERGLLP--NEFTYSGLIHGYLKNGDLESA 451
Query: 88 WKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHT 147
+ + + L P+ + L+ D + F S++ +LD +
Sbjct: 452 EQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML----DQGVMLDNRIYGI 507
Query: 148 LLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRI 207
L+ ++ ++ AF ++ + KN ++ + +C+ AF + +E +
Sbjct: 508 LIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAF-GILDEMSKK 566
Query: 208 ALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
+D PNI NA ++G C +S A V ++ G+ PN ++ L
Sbjct: 567 GVD-------PNIVCYNALIDGLCKS-GDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 618
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
G L + M G + YS L +G G+LE A I G+ S
Sbjct: 619 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS 678
Query: 328 FSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
F+ +V GF + G ++ L +I + L P+ + ++ IIS G
Sbjct: 679 FNN-----LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN-----IISGLSEAGKLS 728
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG-LQLDVGNYDAL 444
+ H+I E L+ E + L MD+ + G + LDV D +
Sbjct: 729 EVHTIFVE----------------LQQKTSESAARHFSSLFMDMINQGKIPLDV--VDDM 770
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLK-GSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
I + A + RD+ A+ + SYL I+ L
Sbjct: 771 IRDHCKEGNLDKAL-MLRDVIVAKSAPMGCSSYLAIVDNL-------------------- 809
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
C+ G+L +A L+ M
Sbjct: 810 ----------------CRKGKLSEALNLLKEM 825
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 146/368 (39%), Gaps = 33/368 (8%)
Query: 81 TNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLL 140
+++ ++ +FKS+ + + LI +LSS + N++ AF V+ IEKN +
Sbjct: 480 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSS---SGNMEAAF-RVLSEIEKNGSVP 535
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D +L+ + AF ++ M K + + +C K+ + V
Sbjct: 536 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC-KSGDISYARNV 594
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
F L PN + ++G C + +S+A + M G+ P+ +
Sbjct: 595 FNSILAKGL-------VPNCVTYTSLIDGSCK-VGDISNAFYLYNEMLATGITPDAFVYS 646
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L + G E+ + L M G +S F ++L+ G+ K G ++ + + + +G
Sbjct: 647 VLTTGCSSAGDLEQAMFLIEEMFLRGHASISSF-NNLVDGFCKRGKMQETLKLLHVIMGR 705
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP-------SGIVVDR----- 368
G + + T ++ G + G + + + +E Q+ S + +D
Sbjct: 706 GLVPNA----LTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 761
Query: 369 ---SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
V +I G DKA + D + A +G Y+ + C++ + +EA L
Sbjct: 762 IPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNL 821
Query: 426 VMDISSSG 433
+ ++ G
Sbjct: 822 LKEMDKRG 829
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 146/339 (43%), Gaps = 13/339 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+Y N + C+ L V A V+ + LG +P+ ++F L ++G +
Sbjct: 87 VPPNVYTLNILINSFCH-LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 145
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--Y 333
+ L M + GF +V Y +LI+G K+GN +A R + +MEQ + + Y
Sbjct: 146 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLL------RSMEQGNCQPDVVIY 199
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ ++ V NL ++ GI D ++ A NL ++L++
Sbjct: 200 TSIIDSLCKDRQVTEAFNLF---SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQ 256
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + ++ + A CKE + EA ++V + G++ DV Y L++ +
Sbjct: 257 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 316
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A +F M SY T++ G + H+ + +E+ + T +N
Sbjct: 317 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIP-DTKTYN 375
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+++H C GRL+DA M+ P+ TY L++
Sbjct: 376 TLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLD 414
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/327 (18%), Positives = 135/327 (41%), Gaps = 10/327 (3%)
Query: 249 VLGVRPNESSFGFLAYLYALKGLQE--KIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
+L + P S F L ++ ++ ++ L + M+ FG + + LI+ + L
Sbjct: 47 LLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNR 106
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
+ A + L G+ Q D T+ +++G G + +L K+ G
Sbjct: 107 VGFAFSVLAKILKLGH--QPD--PTTFTTLIRGLCVEGKIGEALHLF---DKMIDEGFQP 159
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+ +I+ +G + A +L M C + +Y + + CK+ + EA L
Sbjct: 160 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 219
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ G+ D+ Y +L+ A +++ +L M ++I + T++ L +
Sbjct: 220 SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKE 279
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ +D +++ VE + +++ C +++A + M+ F P+ +
Sbjct: 280 GKVTEAHEIVDMMIQR-GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 338
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRK 573
Y +LINGY + + ++ E+ RK
Sbjct: 339 YTTLINGYCKIHKIDKAMYLFEEMCRK 365
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/361 (18%), Positives = 137/361 (37%), Gaps = 80/361 (22%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ + ++ C V++A ++++ M GV P+ ++ L + L+ ++ V+
Sbjct: 264 PDVVIFSTVVDALCKE-GKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 322
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ +M GF+ ++ Y++LI+GY K+ ++ A + ++ +
Sbjct: 323 VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF-----------EEMCRKEWIPDT 371
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
K + N + GL ++ G A ++ EM A
Sbjct: 372 KTY--NTLMHGLCHV-----------------------------GRLQDAIALFHEMVAR 400
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G L Y L + CK EA L+ I +S L D+ Y+ +I+ + + ++A
Sbjct: 401 GQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAA 460
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
LF ++ KG + ++ T +N +IH
Sbjct: 461 RDLFSNLSS------KGLHPSVWT------------------------------YNIMIH 484
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKIST 576
CK G L +A + M P+ TY ++ G++ + + + E + R S
Sbjct: 485 GLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSA 544
Query: 577 D 577
D
Sbjct: 545 D 545
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 181/415 (43%), Gaps = 74/415 (17%)
Query: 202 EECCRIALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
E+ R+ L+E +D ++ N++ N + G C L + +A ++ M+ +GVRP+ S+
Sbjct: 366 EDAARL-LNEMVDSRLQVNLFVYNIMINGYC-KLGRMVEAHNILHEMTGVGVRPDTYSYN 423
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L Y KGL K E + M GF++ + Y++L+ G+ LG+++ A R L L
Sbjct: 424 SLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKK 483
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNV------------KGLA------NLII-------- 354
G + ++ S T ++ GF ++G +GLA N +I
Sbjct: 484 G-IAPNEISCST---LLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIER 539
Query: 355 --EAQKLE--------PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
EA++L P I+ R+ + S +G D+A IL+E+ G + +
Sbjct: 540 MPEAEELVDKMKQWRCPPDIITYRT----LFSGYCKIGDMDRASRILNELENLGFAPTIE 595
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
+ + + + + ++ ++S+ GL + Y ALI D +A++L+ +M
Sbjct: 596 FFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEM 655
Query: 465 REARI-------------YDLKGSY----LTIMTGLMENHRPEL---------MAAFLDE 498
E + + KG + L + + + P++ +A F+D
Sbjct: 656 IEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDT 715
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
V K WN +I CK GR+EDAK L + F ++ TY SLI+G
Sbjct: 716 VAGGNHHSAKIM-WNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHG 769
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 140/330 (42%), Gaps = 48/330 (14%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYA-LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
V E M G P++ + +A Y +KG+ + +E M + G +V Y ++++GY
Sbjct: 230 VFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEE-MTKMGVEVNLVAYHAVMNGY 288
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKL 359
++G A R + G G FS TY +VKG+ N++ ++ E +K
Sbjct: 289 CEVGQTNDARRMLDSLPGRG------FSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKN 342
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
+ +VVD +V +I+ +G + A +L+EM V L VY + YCK R
Sbjct: 343 KQ--LVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRM 400
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
EA ++ +++ G++ D +Y++L++ AF + M G T
Sbjct: 401 VEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLR------NGFAATT 454
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+T +N+++ FC G ++DA R M+
Sbjct: 455 LT------------------------------YNALLKGFCSLGSIDDALRLWFLMLKKG 484
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
PN+ + +L++G+ + + L +W E
Sbjct: 485 IAPNEISCSTLLDGFFKSGKTEKALNLWKE 514
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 154/352 (43%), Gaps = 22/352 (6%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+ A +A + G C Q+ +DA ++++++ G PN ++ L Y ++ + E
Sbjct: 277 NLVAYHAVMNGYCEVGQT-NDARRMLDSLPGRGFSPNIVTYTLLVKGYCN---EKNMEEA 332
Query: 279 ESLMNEFGFSSQMVF----YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--T 332
E ++ E + Q+V + ++I+GY ++G +E A+R + M S
Sbjct: 333 EGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLL------NEMVDSRLQVNLFV 386
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++ G+ + G + N++ E + G+ D ++ GL +KA +
Sbjct: 387 YNIMINGYCKLGRMVEAHNILHEMTGV---GVRPDTYSYNSLVDGYCKKGLMNKAFETYN 443
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M G + Y LK +C +A +L + G+ + + L++ S
Sbjct: 444 TMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSG 503
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHD 511
+ A +L+++ + ++ T++ GL + R PE A L + ++ R
Sbjct: 504 KTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPE--AEELVDKMKQWRCPPDIIT 561
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+ ++ +CK G ++ A R L + L F P + + SLI G+ A+Q+ V
Sbjct: 562 YRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKV 613
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 148/405 (36%), Gaps = 79/405 (19%)
Query: 189 RKNSNFVAFLKVFEECCRIA-LD---------ENLDFMKPNIYACNAALEGCCYGLQSVS 238
R + + + +F C+I +D ENL F P I N+ + G Q
Sbjct: 554 RCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGF-APTIEFFNSLITGHFIAKQH-G 611
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
++ MS G+ PN ++G L + +G L M E G + SSL+
Sbjct: 612 KVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLV 671
Query: 299 SGYVKLGNLESASRTILLCLG-------------------------GGNMEQSDFSKETY 333
S + + G + A+ + +G GGN + K +
Sbjct: 672 SCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSA---KIMW 728
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
V+ G + G ++ NL+ + L+ G V D +I C G D A + D
Sbjct: 729 NIVIFGLCKLGRIEDAKNLLAD---LKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDT 785
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + G + + Y + CK + A L + + G+ + Y+ LI+
Sbjct: 786 MLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGY 845
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
AF L + M E +G + T+ T ++
Sbjct: 846 ITEAFKLKQRMIE------EGIHPTVFT------------------------------YS 869
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+I+ C G +E+A + L +MI +PN TY +LI GYV E
Sbjct: 870 ILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCE 914
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 2/229 (0%)
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
VKG+ + + +++ G+ V+ +++ +G ++ A +LD + G S +
Sbjct: 256 VKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVT 315
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSG-LQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y +K YC E EA +V +I + L +D + A+I + A L +M
Sbjct: 316 YTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEM 375
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
++R+ Y ++ G + R L E+ V T+ +NS++ +CK G
Sbjct: 376 VDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT-GVGVRPDTYSYNSLVDGYCKKGL 434
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ A T M+ F TY +L+ G+ + L +W + +K
Sbjct: 435 MNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKK 483
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 99/255 (38%), Gaps = 40/255 (15%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVG----------------LGVYVPTL------- 410
++ A N G D A + DEM GC + LG V
Sbjct: 179 LLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAG 238
Query: 411 ------------KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
KAYCK A + V +++ G+++++ Y A++ A
Sbjct: 239 ALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDAR 298
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
+ + +Y ++ G E + E+ ++ ++ V + ++I+
Sbjct: 299 RMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVING 358
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
+C+ GR+EDA R L M+ + + N Y +INGY + ++ H I +++ G
Sbjct: 359 YCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGR----MVEAHNILHEMTGVG 414
Query: 579 QKGIKFEHN-LVDAF 592
+ + +N LVD +
Sbjct: 415 VRPDTYSYNSLVDGY 429
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 170/403 (42%), Gaps = 60/403 (14%)
Query: 209 LDENLD-FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
LDE D PNIY N +EG C + + +A+K++E M+V G P+ + Y
Sbjct: 103 LDEMRDKGCSPNIYTYNVIVEGLCEE-RKLDEAKKMLEEMAVRGYFPD-----VVTYNSF 156
Query: 268 LKGL--QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
+KGL +++ E + + +V Y+++I+G K G+L+SASR + M
Sbjct: 157 IKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRML------DQMTN 210
Query: 326 SDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKL--EPSGIVVDRSVGFGIISACVNL 381
+ + TY ++ GF + G V+ L+ KL P+ + + +G A L
Sbjct: 211 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLG-----ALHRL 265
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G KA +L EM G + + Y + CK R +A + + G + +Y
Sbjct: 266 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 325
Query: 442 DALIEASITSQDFQSAFSLFRDMREA-RIYDLKGSYLTIMTGLMENHRPE----LMAAFL 496
L+E ++ A +L RE +I D+ Y ++ GL + R + L + L
Sbjct: 326 SMLVEELCKKKELDDAITLVEQAREKYQIVDIL-LYTVLLDGLCKGGRFDEACALFSKVL 384
Query: 497 DEVVEDPRV------------------EVKTHD------------WNSIIHAFCKAGRLE 526
DE + +P V ++ H WN ++H C RL
Sbjct: 385 DEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLS 444
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
DA+ L M+ F P+ TY +L++ + + L ++ E
Sbjct: 445 DAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEE 487
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 152/421 (36%), Gaps = 61/421 (14%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+P+ +F L EK +L M E G Y++LISGY K + A +
Sbjct: 7 QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
+ + + + TY +V G + G K L+ E + S + +V
Sbjct: 67 FLAEMVKNHCLP----TVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV-- 120
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
I+ D+A +L+EM G + Y +K CK R EA + ++
Sbjct: 121 -IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARM 176
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
+ DV +Y +I S D SA + M +Y +++ G + E
Sbjct: 177 PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERA 236
Query: 493 AAFLDEVV---------------------------EDPRVEVK----THD---WNSIIHA 518
LD ++ ED VE++ T D +N+ I
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 296
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
CKA R++ AK RM+ PN +Y L+ ++ + + + + K
Sbjct: 297 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREK----- 351
Query: 579 QKGIKFEHNLVDAFLY-----ALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHK 633
+ +VD LY L KGG FD + K + K+ + +++H
Sbjct: 352 -------YQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHC 404
Query: 634 K 634
K
Sbjct: 405 K 405
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 149/355 (41%), Gaps = 48/355 (13%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYAL-KGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
A E+M G+ PN S+ L + YA+ + L+ I +E + E G S YS +I
Sbjct: 211 ARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAE-GVSPNAATYSVII 269
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEA 356
SGY +LG++E+A R L N +D Y ++ + + GN++ ++ +E
Sbjct: 270 SGYGRLGDVEAAERWFQRAL-SENWHHNDV---IYNNIIHAYCKAGNMERAEAIMTAMEE 325
Query: 357 QKLEPS----GIVVDRSVGFGIISACVN-----------------------------LGL 383
Q LE + +++D V + C+N LG
Sbjct: 326 QGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGK 385
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
DKA I +EM G Y + Y + TA A + D+S++G++ D Y+
Sbjct: 386 MDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNI 445
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
L+ A + A L M +Y I+ G M+ +L AF E V D
Sbjct: 446 LMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIG--DLRMAF--ETVRDM 501
Query: 504 RV---EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++ +N I+H +AG+++ A + M+ PN+++Y +LI GY
Sbjct: 502 KMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYA 556
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 180/426 (42%), Gaps = 46/426 (10%)
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
C + + + ++ + G+ P S+G L LY+ G +K +++ + M + G
Sbjct: 345 CRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHN 404
Query: 291 MVFYSSLISGYVKLGNLESA-----------------SRTILL---CLGG---------G 321
YS +I GYV+LG+ +A + IL+ C G
Sbjct: 405 RKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLA 464
Query: 322 NMEQSDFSK--ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
ME D TY ++ GF++ G+++ +A + K+ +G + I+
Sbjct: 465 RMESGDCPPTLRTYTIIIDGFMKIGDLR-MAFETVRDMKM--AGFRPSAATYNVIMHGLA 521
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
G D+A SI+DEM G Y ++ Y A + I GL+ DV
Sbjct: 522 QAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVI 581
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y +L++A + QS ++ +M A + Y ++ G + R ++ A ++
Sbjct: 582 AYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQ--RGDMWEA--SDI 637
Query: 500 VEDPRVEVKT---HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
++ R E T H + S I+A CKAG + A T+ +M +PN Q Y +LI+G+ +
Sbjct: 638 MQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWAS 697
Query: 557 AEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL--YALVKGGFFDAVMQVVEKSQE 614
A L+ + E+K S H ++ + L A+ + FD V++V + +
Sbjct: 698 ASYPEKALICYDEMK---SAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMVD 754
Query: 615 MKVFVD 620
+ VD
Sbjct: 755 QGICVD 760
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ ++G++ +V +Y LI A +QD + A + +M + +Y I++G
Sbjct: 218 MRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGD 277
Query: 489 PELMAAFLDEVVEDPRVEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
E + + E H+ +N+IIHA+CKAG +E A+ + M E
Sbjct: 278 VEAAERWFQRALS----ENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLG 333
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
Y L++GYV L ++ +K + T
Sbjct: 334 LYNMLMDGYVHCRAVDKCLNVFRRLKARTET 364
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 72/412 (17%), Positives = 142/412 (34%), Gaps = 91/412 (22%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
DA KV++ + +P + L Y +G + M G + Y++LI
Sbjct: 176 DARKVVDAFKRIK-KPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLI 234
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
Y +L A + C+ E + TY ++ G+ + G+V+ A
Sbjct: 235 HAYAVAQDLRGA----IACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRA-- 288
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
LS+ H N +Y + AYCK
Sbjct: 289 ------------------------LSENWHH-----NDV-------IYNNIIHAYCKAGN 312
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR---------------- 462
A ++ + GL+ +G Y+ L++ + + ++FR
Sbjct: 313 MERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVS 372
Query: 463 ----------------------DMREARIYDLKGSYLTIMTGLME-NHRPELMAAFLDEV 499
+M + I + +Y I+ G ++ + F D
Sbjct: 373 YGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFED-- 430
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ + ++ +N +++AFCK G++ A L RM P +TY +I+G++
Sbjct: 431 MSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMK--- 487
Query: 560 YFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
L M E R + G + +N++ ++ L + G D ++++
Sbjct: 488 -IGDLRMAFETVRDMKMAGFRPSAATYNVI---MHGLAQAGQMDRAASIIDE 535
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 175/421 (41%), Gaps = 44/421 (10%)
Query: 217 KPNI--YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
KP+I Y C L + V+ A + + M G++ N ++ L + G
Sbjct: 435 KPSIISYGC---LLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSML-----INGF--- 483
Query: 275 IVELESLMNEFGFSSQMV---------FYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
+ L N F +M+ Y+ LI + K+GN++ A + L E+
Sbjct: 484 -IHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA----ICILEKMQKER 538
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
S + +++G+ G++K + + + SG V +I V
Sbjct: 539 MQPSNRAFRPIIEGYAVAGDMKSALDTL---DLMRRSGCVPTVMTYNALIHGLVRKHKVQ 595
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A S+LD+M+ G + Y ++ Y +A + I SGL+LDV Y+ L+
Sbjct: 596 RAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 655
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
A S QSA ++ R+M +I Y ++ G + ++ ED V
Sbjct: 656 RACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG-V 714
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
H + S I+A CKAG ++ A++ + M+ + +PN +TY +LI G+ L
Sbjct: 715 PPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALK 774
Query: 566 MWHEIKRKISTDGQKGIKFE----HNLVDAFL--YALVKGGFFDAVMQVVEKSQEMKVFV 619
+ E+K G+K + H LV + L +++G + ++ V + E + V
Sbjct: 775 CFEEMK-------LAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTV 827
Query: 620 D 620
D
Sbjct: 828 D 828
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 173/444 (38%), Gaps = 59/444 (13%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYAL-KGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
A E M G+ PN F L + YA+ + ++ + +E + +E G +V YS LI
Sbjct: 282 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSE-GLELTIVTYSILI 340
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
SG+ K+ + +SA + S + Y ++ Q+GN++ L+ E
Sbjct: 341 SGFAKINDSQSADNL----FKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCE--- 393
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+E GI V ++ + +K + + + CG + Y L Y K +
Sbjct: 394 MEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGK 453
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM------REARIYDL 472
A+A + ++ S G++ + Y LI I DF +AF++F +M + IY+L
Sbjct: 454 VAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNL 513
Query: 473 ------KGSYLTIMTGLMENHRPELMA----AFLD-----EVVEDPRVEVKTHD------ 511
K + ++E + E M AF V D + + T D
Sbjct: 514 LIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 573
Query: 512 -------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+N++IH + +++ A L +M PN+ TY ++ GY +
Sbjct: 574 CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAF 633
Query: 565 MMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMK-------- 616
+ +IK + G+K + + + L A K G + + V + K
Sbjct: 634 EYFTKIK-------ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIY 686
Query: 617 -VFVDKWKYKQAFMENHKKLKVAK 639
+ +D W + E +K K
Sbjct: 687 NILIDGWARRGDVWEAEDLMKQMK 710
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 174/409 (42%), Gaps = 30/409 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ ++ ++G C Q+++ AE +++ M GV PN ++ + Y G E+ V
Sbjct: 236 PDVVTYSSLIDGLCKA-QAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVR 294
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M+ G +V Y LI Y K+G A + G S Y ++
Sbjct: 295 LLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTI----YHILL 350
Query: 338 KGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
G+ G +V+ L +L+I GI + +I A G DKA + EM
Sbjct: 351 HGYATKGALIDVRDLLDLMIR------DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEM 404
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + Y + CK R +A + S GL ++ ++ +LI + ++
Sbjct: 405 RQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEW 464
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH--DW 512
+ L +M I+ TIM L + R F D V+ + VK + +
Sbjct: 465 KKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH---IGVKPNVVSY 521
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
N++I +C G+++++ + RM+ + P+ TY +L+NGY + L ++ E+ R
Sbjct: 522 NTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFR 581
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGFFDAV----MQVVEKSQEMKV 617
K +KF + L+ L + G A M++V++ ++++
Sbjct: 582 -------KDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRI 623
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 157/400 (39%), Gaps = 59/400 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG--VRPNESSFGFLAYLYALKGLQEKI 275
P++++ NA ++G C +S E ++ + G PN S+ + + +G +K
Sbjct: 163 PDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKA 222
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L M GF +V YSSLI G K + A + G M + TY
Sbjct: 223 YFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNT----RTYNI 278
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+++G+ G ++ L+ +K+ SG+ D +I +G +A S+ D M
Sbjct: 279 MIRGYCSLGQLEEAVRLL---KKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMV 335
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G +Y L Y + + L+ + G+ + ++ LI A
Sbjct: 336 RKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVD 395
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A + F +MR+ GL RP++++ ++++
Sbjct: 396 KAMTAFTEMRQ--------------NGL----RPDVVS------------------YSTV 419
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
IH CK GR+EDA +M+ PN ++ SLI+G + + W +++
Sbjct: 420 IHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGE-------WKKVEELAF 472
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGG-------FFDAVMQV 608
+GI + ++ + L K G FFD V+ +
Sbjct: 473 EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHI 512
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 148/380 (38%), Gaps = 17/380 (4%)
Query: 198 LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNES 257
L EE R+ + ++P++ ++ C + ++A V ++M G +PN +
Sbjct: 286 LGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYC-KIGRCAEARSVFDSMVRKGQKPNST 344
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
+ L + YA KG + +L LM G + ++ LI Y K G ++ A
Sbjct: 345 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFT-- 402
Query: 318 LGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII 375
M Q+ + +Y V+ + G V+ + + ++ G+ + +I
Sbjct: 403 ----EMRQNGLRPDVVSYSTVIHILCKIGRVE---DAVYHFNQMVSEGLSPNIISFTSLI 455
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
++G K + EM G + CKE R EA + G++
Sbjct: 456 HGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVK 515
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
+V +Y+ LI+ + F M + +Y ++ G +N R E A
Sbjct: 516 PNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALAL 575
Query: 496 LDEVVEDPRVEVK--THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
E+ R +VK N I+H +AGR+ A+ +M+ + +TY +++ G
Sbjct: 576 YREMF---RKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGG 632
Query: 554 YVTAEQYFSVLMMWHEIKRK 573
L M+ +++ K
Sbjct: 633 LCENSCVDEALRMFEDLRSK 652
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 141/380 (37%), Gaps = 56/380 (14%)
Query: 217 KPNIYACNAALEGCCYGLQ-SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
KPN + L G Y + ++ D +++ M G+ +F L YA G +K
Sbjct: 340 KPNSTIYHILLHG--YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKA 397
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ + M + G +V YS++I K+G +E A M S ++
Sbjct: 398 MTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHF------NQMVSEGLSPNIISF 451
Query: 334 CEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ G G K + L E + + P I ++ I+ G +A
Sbjct: 452 TSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNT-----IMDNLCKEGRVVEAQDFF 506
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
D + G + Y + YC + E+ + + S GL+ D Y+AL+ +
Sbjct: 507 DMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKN 566
Query: 452 QDFQSAFSLFRDM--------------------REARIYDLKGSYL-------------- 477
+ A +L+R+M + RI + Y+
Sbjct: 567 GRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETY 626
Query: 478 -TIMTGLMENH-RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
T++ GL EN E + F D + E+ +N +I+A K GR+++AK M
Sbjct: 627 NTVLGGLCENSCVDEALRMFED--LRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAM 684
Query: 536 IFLQFEPNDQTYLSLINGYV 555
+ P+ TY +I +
Sbjct: 685 VLRGPVPHVITYSLMIKSRI 704
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 115/287 (40%), Gaps = 29/287 (10%)
Query: 193 NFVAFLKVFEECCRIALDENLDF---------MKPNIYACNAALEGCCYGLQSVSDAEKV 243
+ V++ V C+I E+ + + PNI + + + G C S+ + +KV
Sbjct: 412 DVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLC----SIGEWKKV 467
Query: 244 IE---TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN---EFGFSSQMVFYSSL 297
E M G+ P+ F+ + + ++VE + + G +V Y++L
Sbjct: 468 EELAFEMINRGIHPDAI---FMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTL 524
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
I GY +G ++ + + + G S TY ++ G+ +NG V+ L E
Sbjct: 525 IDGYCFVGKMDESIKQFDRMVSIGLRPDS----WTYNALLNGYFKNGRVEDALALYREMF 580
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ + + ++ I+ G A + +M G + + Y L C+
Sbjct: 581 RKDVKFCAITSNI---ILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENS 637
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
EA ++ D+ S +LDV ++ +I A + A SLF M
Sbjct: 638 CVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAM 684
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 175/421 (41%), Gaps = 44/421 (10%)
Query: 217 KPNI--YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
KP+I Y C L + V+ A + + M G++ N ++ L + G
Sbjct: 436 KPSIISYGC---LLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSML-----INGF--- 484
Query: 275 IVELESLMNEFGFSSQMV---------FYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
+ L N F +M+ Y+ LI + K+GN++ A + L E+
Sbjct: 485 -IHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA----ICILEKMQKER 539
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
S + +++G+ G++K + + + SG V +I V
Sbjct: 540 MQPSNRAFRPIIEGYAVAGDMKSALDTL---DLMRRSGCVPTVMTYNALIHGLVRKHKVQ 596
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A S+LD+M+ G + Y ++ Y +A + I SGL+LDV Y+ L+
Sbjct: 597 RAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 656
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
A S QSA ++ R+M +I Y ++ G + ++ ED V
Sbjct: 657 RACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG-V 715
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
H + S I+A CKAG ++ A++ + M+ + +PN +TY +LI G+ L
Sbjct: 716 PPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALK 775
Query: 566 MWHEIKRKISTDGQKGIKFE----HNLVDAFL--YALVKGGFFDAVMQVVEKSQEMKVFV 619
+ E+K G+K + H LV + L +++G + ++ V + E + V
Sbjct: 776 CFEEMK-------LAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTV 828
Query: 620 D 620
D
Sbjct: 829 D 829
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 173/444 (38%), Gaps = 59/444 (13%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYAL-KGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
A E M G+ PN F L + YA+ + ++ + +E + +E G +V YS LI
Sbjct: 283 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSE-GLELTIVTYSILI 341
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
SG+ K+ + +SA + S + Y ++ Q+GN++ L+ E
Sbjct: 342 SGFAKINDSQSADN----LFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVRE--- 394
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+E GI V ++ + +K + + + CG + Y L Y K +
Sbjct: 395 MEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGK 454
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM------REARIYDL 472
A+A + ++ S G++ + Y LI I DF +AF++F +M + IY+L
Sbjct: 455 VAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNL 514
Query: 473 ------KGSYLTIMTGLMENHRPELMA----AFLD-----EVVEDPRVEVKTHD------ 511
K + ++E + E M AF V D + + T D
Sbjct: 515 LIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 574
Query: 512 -------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+N++IH + +++ A L +M PN+ TY ++ GY +
Sbjct: 575 CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAF 634
Query: 565 MMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMK-------- 616
+ +IK + G+K + + + L A K G + + V + K
Sbjct: 635 EYFTKIK-------ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIY 687
Query: 617 -VFVDKWKYKQAFMENHKKLKVAK 639
+ +D W + E +K K
Sbjct: 688 NILIDGWARRGDVWEAEDLMKQMK 711
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 174/414 (42%), Gaps = 30/414 (7%)
Query: 217 KPNI--YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL--AYLYALKGLQ 272
KP+I Y C L + V+ A + + M G++ N ++ L +++ L
Sbjct: 440 KPSIISYGC---LLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIH-LHDFA 495
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
E ++ G Y+ LI + K+GN++ A + L E+ S
Sbjct: 496 NAFAIFEEMLRS-GLQPDRAIYNLLIEAFCKMGNMDRA----ICILEKMQKERMQPSNRA 550
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+ +++G+ G++K + + + SG V +I V +A S+LD
Sbjct: 551 FRPIIEGYAVAGDMKSALDTL---DLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLD 607
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M+ G + Y ++ Y +A + I SGL+LDV Y+ L+ A S
Sbjct: 608 KMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSG 667
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
QSA ++ R+M +I Y ++ G + ++ ED V H +
Sbjct: 668 RMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG-VPPNIHTY 726
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
S I+A CKAG ++ A++ + M+ + +PN +TY +LI G+ L + E+K
Sbjct: 727 TSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMK- 785
Query: 573 KISTDGQKGIKFE----HNLVDAFL--YALVKGGFFDAVMQVVEKSQEMKVFVD 620
G+K + H LV + L +++G + ++ V + E + VD
Sbjct: 786 ------LAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVD 833
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 172/423 (40%), Gaps = 46/423 (10%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYAL-KGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
A E M G+ PN F L + YA+ + ++ + +E + +E G +V YS LI
Sbjct: 316 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSE-GLELTIVTYSILI 374
Query: 299 SGYVKL------GNLESASRTILLCLGGGNMEQS--DFSKETYCEVVKGF--LQNGNVKG 348
SG+ K+ GN+E A + ME+ D + Y ++ G+ +QN N
Sbjct: 375 SGFAKINDSHQSGNMERAEELVR------EMEEDGIDAPIDVYHSMMHGYTIIQNEN--- 425
Query: 349 LANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
++ ++L+ G + +G +++ V +G KA SI EM +CG Y
Sbjct: 426 --KCLVVFERLKECGFKPS-IISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYS 482
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ + H A A + ++ SGLQ D Y+ LIEA + A + M++
Sbjct: 483 MLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKE 542
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLD--EVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
R+ ++ I+ G M + LD +++ +N++IH + ++
Sbjct: 543 RMQPSNRAFRPIIEGYAVAGD---MKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 599
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFE 585
+ A L +M PN+ TY ++ GY + + +IK + G+K +
Sbjct: 600 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIK-------ESGLKLD 652
Query: 586 HNLVDAFLYALVKGGFFDAVMQVVEKSQEMK---------VFVDKWKYKQAFMENHKKLK 636
+ + L A K G + + V + K + +D W + E +K
Sbjct: 653 VYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMK 712
Query: 637 VAK 639
K
Sbjct: 713 QMK 715
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 174/414 (42%), Gaps = 30/414 (7%)
Query: 217 KPNI--YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL--AYLYALKGLQ 272
KP+I Y C L + V+ A + + M G++ N ++ L +++ L
Sbjct: 414 KPSIISYGC---LLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIH-LHDFA 469
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
E ++ G Y+ LI + K+GN++ A + L E+ S
Sbjct: 470 NAFAIFEEMLRS-GLQPDRAIYNLLIEAFCKMGNMDRA----ICILEKMQKERMQPSNRA 524
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+ +++G+ G++K + + + SG V +I V +A S+LD
Sbjct: 525 FRPIIEGYAVAGDMKSALDTL---DLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLD 581
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M+ G + Y ++ Y +A + I SGL+LDV Y+ L+ A S
Sbjct: 582 KMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSG 641
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
QSA ++ R+M +I Y ++ G + ++ ED V H +
Sbjct: 642 RMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG-VPPNIHTY 700
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
S I+A CKAG ++ A++ + M+ + +PN +TY +LI G+ L + E+K
Sbjct: 701 TSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMK- 759
Query: 573 KISTDGQKGIKFE----HNLVDAFL--YALVKGGFFDAVMQVVEKSQEMKVFVD 620
G+K + H LV + L +++G + ++ V + E + VD
Sbjct: 760 ------LAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVD 807
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 173/444 (38%), Gaps = 59/444 (13%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYAL-KGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
A E M G+ PN F L + YA+ + ++ + +E + +E G +V YS LI
Sbjct: 261 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSE-GLELTIVTYSILI 319
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
SG+ K+ + +SA + S + Y ++ Q+GN++ L+ E
Sbjct: 320 SGFAKINDSQSADN----LFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVRE--- 372
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+E GI V ++ + +K + + + CG + Y L Y K +
Sbjct: 373 MEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGK 432
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM------REARIYDL 472
A+A + ++ S G++ + Y LI I DF +AF++F +M + IY+L
Sbjct: 433 VAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNL 492
Query: 473 ------KGSYLTIMTGLMENHRPELMA----AFLD-----EVVEDPRVEVKTHD------ 511
K + ++E + E M AF V D + + T D
Sbjct: 493 LIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 552
Query: 512 -------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+N++IH + +++ A L +M PN+ TY ++ GY +
Sbjct: 553 CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAF 612
Query: 565 MMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMK-------- 616
+ +IK + G+K + + + L A K G + + V + K
Sbjct: 613 EYFTKIK-------ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIY 665
Query: 617 -VFVDKWKYKQAFMENHKKLKVAK 639
+ +D W + E +K K
Sbjct: 666 NILIDGWARRGDVWEAEDLMKQMK 689
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 155/357 (43%), Gaps = 49/357 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N A+ G C L+ + +A K+++ M + G PN ++G L + G K+ E
Sbjct: 285 PDVNTFNDAIHGLCKMLR-IHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMG---KVDE 340
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L+N+ + +V +++LI+GYV G L+ A M +S S ++
Sbjct: 341 ARMLLNKVP-NPNVVLFNTLINGYVSRGRLDEAKAV---------MHESMLSVGCGPDI- 389
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
F N + GL G +V A +++EM
Sbjct: 390 --FTYNTLILGLCK----------KGYLV-------------------SARELMNEMQIK 418
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC + Y + +CKE R EA ++ ++S GL L+ Y+ LI A + Q A
Sbjct: 419 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 478
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLME-NHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
++F DM ++ +++ GL + N E + + D ++E V T +N++I
Sbjct: 479 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG--VIANTITYNTLI 536
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
HAF + G +++A + + M+F +D TY LI A L ++ ++ K
Sbjct: 537 HAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 593
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 143/343 (41%), Gaps = 19/343 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I+ N + G C VS A +++ M + G PN ++ L + +G E+
Sbjct: 387 PDIFTYNTLILGLCKKGYLVS-ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 445
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M+ G + V Y+ LIS K ++ A G+M + T+
Sbjct: 446 VLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF------GDMSSKGCKPDIFTFNS 499
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + V + Q + G++ + +I A + G +A ++++M
Sbjct: 500 LIFGLCK---VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 556
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC + Y +KA C+ + L D+ S GL + + + LI + + Q
Sbjct: 557 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 616
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD---W 512
A RDM + +Y +++ GL + R + D++ +VE D +
Sbjct: 617 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL----QVEGICPDAITY 672
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
N++I CK G +DA L R + F PN+ T+ L++ ++
Sbjct: 673 NTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFI 715
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 178/400 (44%), Gaps = 19/400 (4%)
Query: 194 FVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR 253
+V L++ C ++ F K ++ +CN L G + + V + M ++
Sbjct: 140 YVTNLEIHSACEVFRRVQDYGF-KLSLNSCNPLLSALVKG-NETGEMQYVYKEMIKRRIQ 197
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT 313
PN ++F G K ++ + +GFS +V Y++LI G+ K G+ R
Sbjct: 198 PNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRA 257
Query: 314 --ILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRS 369
IL + + ++ T+ ++ GF ++ NV N E Q+ L+P+ + +
Sbjct: 258 DAILKEMLANKICPNEI---TFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYN-- 312
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
+I+ N G D+A ++ D+M G + + + +CK+ EA +L DI
Sbjct: 313 ---SLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDI 369
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+ L + ++ +I+A + + F+L M + I+ +Y ++ GL N
Sbjct: 370 AEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNV 429
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
L+E +E+ ++ +N +I +CK G A++ L M+ + +PN TY +
Sbjct: 430 RAAKKLLNE-MENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNT 488
Query: 550 LINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
L++GY + L +++ ++ +G++ +N++
Sbjct: 489 LMDGYCMEGNLKAAL----KVRTQMEKEGKRANVVTYNVL 524
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 184/473 (38%), Gaps = 47/473 (9%)
Query: 95 TANSLFPS------KPVTNSLIAHLSSLQDNHNLKRAFASVVYV-IEKNPKLLDFQTVHT 147
T +S+F S +P N+LI + L NL+ A V+ ++ L + +
Sbjct: 111 TVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNP 170
Query: 148 LLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICR-----KNSNFVAFLKVFE 202
LL ++ N + K M K R + F+ +C+ K + + +K +
Sbjct: 171 LLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWG 230
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCY--GLQSVSDAEKVIETMSVLGVRPNESSFG 260
PNI N ++G C + A+ +++ M + PNE +F
Sbjct: 231 -------------FSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFN 277
Query: 261 FLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
L + E ++ ++ E G +V Y+SLI+G G L+ A
Sbjct: 278 TLIDGFCK---DENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKM 334
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGII 375
+G G + T+ ++ GF + +K L I Q L P+ I + +I
Sbjct: 335 VGLG----LKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNT-----MI 385
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
A G+ ++ ++ + M G + Y + C+ A +L+ ++ + L+
Sbjct: 386 DAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELK 445
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG-LMENHRPELMAA 494
DV Y+ LI + A L +M + +Y T+M G ME + +
Sbjct: 446 ADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKV 505
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
E R V T +N +I FCK G+LEDA R L M+ PN TY
Sbjct: 506 RTQMEKEGKRANVVT--YNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 135/344 (39%), Gaps = 53/344 (15%)
Query: 137 PKLLDFQTV---HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSN 193
P ++ + T+ H GS A A A++K M N+ P E+ L+D K+ N
Sbjct: 233 PNIVTYNTLIDGHCKKGS---AGKMYRADAILKEMLANK-ICPNEITFNTLIDGFCKDEN 288
Query: 194 FVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR 253
+A FEE R L KPNI N+ + G + +A + + M LG++
Sbjct: 289 VLAAKNAFEEMQRQGL-------KPNIVTYNSLINGLSNN-GKLDEAIALWDKMVGLGLK 340
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT 313
PN +F L + K + ++ +L + E + ++++I + K G +E
Sbjct: 341 PNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEG--- 397
Query: 314 ILLCLGGGNMEQSDFSK-ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
L +++ F TY ++ G +N NV+ L+ E + E VV ++
Sbjct: 398 --FALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILI 455
Query: 373 G-------------IISACVNLGLSDK-------------------AHSILDEMNACGCS 400
G ++ +N+G+ A + +M G
Sbjct: 456 GGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKR 515
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
+ Y +K +CK + +A +L+ ++ GL + YD +
Sbjct: 516 ANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 155/357 (43%), Gaps = 49/357 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N A+ G C L+ + +A K+++ M + G PN ++G L + G K+ E
Sbjct: 303 PDVNTFNDAIHGLCKMLR-IHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMG---KVDE 358
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L+N+ + +V +++LI+GYV G L+ A M +S S ++
Sbjct: 359 ARMLLNKVP-NPNVVLFNTLINGYVSRGRLDEAKAV---------MHESMLSVGCGPDI- 407
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
F N + GL G +V A +++EM
Sbjct: 408 --FTYNTLILGLCK----------KGYLV-------------------SARELMNEMQIK 436
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC + Y + +CKE R EA ++ ++S GL L+ Y+ LI A + Q A
Sbjct: 437 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 496
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLME-NHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
++F DM ++ +++ GL + N E + + D ++E V T +N++I
Sbjct: 497 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG--VIANTITYNTLI 554
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
HAF + G +++A + + M+F +D TY LI A L ++ ++ K
Sbjct: 555 HAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 611
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 143/343 (41%), Gaps = 19/343 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I+ N + G C VS A +++ M + G PN ++ L + +G E+
Sbjct: 405 PDIFTYNTLILGLCKKGYLVS-ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 463
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M+ G + V Y+ LIS K ++ A G+M + T+
Sbjct: 464 VLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF------GDMSSKGCKPDIFTFNS 517
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + V + Q + G++ + +I A + G +A ++++M
Sbjct: 518 LIFGLCK---VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 574
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC + Y +KA C+ + L D+ S GL + + + LI + + Q
Sbjct: 575 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 634
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD---W 512
A RDM + +Y +++ GL + R + D++ +VE D +
Sbjct: 635 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL----QVEGICPDAITY 690
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
N++I CK G +DA L R + F PN+ T+ L++ ++
Sbjct: 691 NTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFI 733
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 154/370 (41%), Gaps = 81/370 (21%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQN 343
G ++FY++LI GY K G++E A+ + ++ F + ETY ++ GF +
Sbjct: 215 GCIPNIIFYNTLIDGYCKKGDMEMANGLFI------ELKLKGFLPTVETYGAIINGFCKK 268
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC---- 399
G+ K + L++E + G+ V+ V II A G KA ++ M CGC
Sbjct: 269 GDFKAIDRLLME---MNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDI 325
Query: 400 -------------------------SVGLGV------YVPTLKAYCKEHRTAEATQLVMD 428
++G G+ Y P + AYCK+ A+ +++
Sbjct: 326 VTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIE 385
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
++ G + D+ Y AL+ + + + A ++ M E ++ G Y +M+GL + +
Sbjct: 386 MTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFK 445
Query: 489 -PE---LMAAFLDE-VVEDPRVEVKTHD-----------------------------WNS 514
P L+A LD+ V+ D V D +N+
Sbjct: 446 LPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNA 505
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRK 573
+I +CK G ++DA + RM P++ TY ++I+GYV M+ E +K K
Sbjct: 506 MIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMK 565
Query: 574 ISTDGQKGIK 583
+ G++
Sbjct: 566 CKPNVMDGLQ 575
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 149/389 (38%), Gaps = 68/389 (17%)
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES-LMNEFGFSSQMVFYSS 296
S+ E V+E M V + P + + Y+ GL EK +EL ++ + + ++ +S
Sbjct: 111 SEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNS 170
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
L++ VKLG +E A + F+ C +VKG + G ++ E
Sbjct: 171 LLNMLVKLGRIEIARK---------------FT----CIMVKGLCKEGKLE-------EG 204
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+KL +++ GC + Y + YCK+
Sbjct: 205 RKL-------------------------------IEDRWGQGCIPNIIFYNTLIDGYCKK 233
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
A L +++ G V Y A+I DF++ L +M + Y
Sbjct: 234 GDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVY 293
Query: 477 LTIMTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
TI+ ++ ++ ++E + ++ T +N++I C+ G++ +A + L +
Sbjct: 294 NTIIDARYKHGHIVKAVETIEGMIECGCKPDIVT--YNTLISGSCRDGKVSEADQLLEQA 351
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYA 595
+ PN +Y LI+ Y Y E+ ++G K + A ++
Sbjct: 352 LGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMT-------ERGHKPDLVTYGALVHG 404
Query: 596 LVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
LV G D + + EK E VF D Y
Sbjct: 405 LVVAGEVDVALTIREKMLERGVFPDAGIY 433
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 150/345 (43%), Gaps = 10/345 (2%)
Query: 207 IALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
I E L F KPN+ + N + G ++ A ++++ M V G+ P+ ++G L
Sbjct: 196 IGFMEGLGF-KPNVVSYNTIIHGYS-SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGM 253
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
+G E+ L M E G V Y++LI GY G+LE A + G M
Sbjct: 254 CKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP-- 311
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
S TY +V G + ++I E +K GI+ D +I+ G + +
Sbjct: 312 --SVSTYNLLVHALFMEGRMGEADDMIKEMRK---KGIIPDAITYNILINGYSRCGNAKR 366
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + +EM + G Y + + +R EA L I G+ DV ++A+I+
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ + + AF L ++M + + ++ T+M G + E LDE ++ ++
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE-MKXRGIK 485
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+N++I + + G ++DA M+ + F P TY +LI
Sbjct: 486 PDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALI 530
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 137/323 (42%), Gaps = 23/323 (7%)
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
L+G +K E M GF +V Y+++I GY GN+E A R IL + +E
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARR-ILDAMRVKGIEPDS 243
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
+ TY ++ G + G ++ + L K+ G+V + +I N G ++A
Sbjct: 244 Y---TYGSLISGMCKEGRLEEASGLF---DKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 297
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
S DEM G + Y + A E R EA ++ ++ G+ D Y+ LI
Sbjct: 298 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 357
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR----PELMAAFLDEVVEDP 503
+ + AF L +M I +Y +++ L +R +L LD+ V P
Sbjct: 358 YSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVS-P 416
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
V + +N++I C G +E A L+ M P++ T+ +L+ G +
Sbjct: 417 DVIM----FNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 472
Query: 564 LMMWHEIKRKISTDGQKGIKFEH 586
M+ E+K +GIK +H
Sbjct: 473 RMLLDEMK-------XRGIKPDH 488
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 116/300 (38%), Gaps = 41/300 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVI---ETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
PN N ++G C + D E+ + M G+ P+ S++ L + ++G +
Sbjct: 276 PNAVTYNTLIDGYC----NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 331
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-------------------SRTIL 315
++ M + G + Y+ LI+GY + GN + A + I
Sbjct: 332 ADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIY 391
Query: 316 LCLGGGNMEQSD--FSKE----------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
+ M+++D F K + ++ G NGNV+ L+ E +
Sbjct: 392 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDR---KS 448
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+ D ++ G ++A +LDEM G Y + Y + +A
Sbjct: 449 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAF 508
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+ ++ S G + Y+ALI+ +Q+ A L ++M I +YL+++ G+
Sbjct: 509 XVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 148/356 (41%), Gaps = 80/356 (22%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQN 343
G ++FY++LI GY K G++E A+ + ++ F + ETY ++ GF +
Sbjct: 234 GCIPNIIFYNTLIDGYCKKGDMEMANGLFI------ELKLKGFLPTVETYGAIINGFCKK 287
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC---- 399
G+ K + L++E + G+ V+ V II A G KA ++ M CGC
Sbjct: 288 GDFKAIDRLLME---MNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDI 344
Query: 400 -------------------------SVGLGV------YVPTLKAYCKEHRTAEATQLVMD 428
++G G+ Y P + AYCK+ A+ +++
Sbjct: 345 VTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIE 404
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
++ G + D+ Y AL+ + + + A ++ M E ++ G Y +M+GL + +
Sbjct: 405 MTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFK 464
Query: 489 -PE---LMAAFLDE-VVEDPRVEVKTHD-----------------------------WNS 514
P L+A LD+ V+ D V D +N+
Sbjct: 465 LPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNA 524
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+I +CK G ++DA + RM P++ TY ++I+GYV M+ E+
Sbjct: 525 MIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREM 580
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 145/344 (42%), Gaps = 21/344 (6%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP+I N + G C VS+A++++E G+ PN+ S+ L + Y +G ++
Sbjct: 341 KPDIVTYNTLISGSCRD-GKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRAS 399
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
M E G +V Y +L+ G V G ++ A L + +E+ F
Sbjct: 400 NWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVA-----LTIREKMLERGVFPDAG---- 450
Query: 337 VKGFLQNGNVKGL---ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+ L +G K A ++ A+ L+ S ++ D V ++ + G D+A + +
Sbjct: 451 IYNILMSGLCKKFKLPAAKLLLAEMLDQS-VLPDAFVYATLVDGFIRNGNLDEARKLFEL 509
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
G + G+ Y +K YCK +A + + L D Y +I+ + D
Sbjct: 510 TIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHD 569
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN---HRPELMAAFLDEVVEDPRVEVKTH 510
A +FR+M + + +Y +++ G HR + + P V
Sbjct: 570 LDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVT--- 626
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++ +I +FCK +L DA M+ + PND T+ L+NG+
Sbjct: 627 -YSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGF 669
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 174/429 (40%), Gaps = 51/429 (11%)
Query: 232 YGLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFS 288
+G D +K V E + G RP+ S+G L LY G K + + M G
Sbjct: 401 HGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIK 460
Query: 289 SQMVFYSSLISGYVKLGNLESA--------------SRTILLCL-----GGGNM------ 323
YS LI+G++ L + +A R I L GNM
Sbjct: 461 HNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRI 520
Query: 324 ------EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
E+ S T+ +++GF G++K + + + SG +I
Sbjct: 521 FERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTL---DLMRRSGCAPTVMTYNALIHG 577
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
+ ++A S+LD+M+ G + Y ++ Y +A + I SGL+LD
Sbjct: 578 LIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLD 637
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
V Y+ L+ A S QSA ++ R+M +I Y ++ G A +
Sbjct: 638 VYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMK 697
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
++ ED + H + S I+A CKAG ++ A+ ++ M + +PN +T+ +LI G+
Sbjct: 698 QMKEDG-IPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKV 756
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFE----HNLVDAFL--YALVKGGFFDAVMQVVEK 611
L + E+K G+K + H LV + L +++G + ++ V +
Sbjct: 757 SLPDRALKCFEEMK-------SAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSVCRE 809
Query: 612 SQEMKVFVD 620
E + VD
Sbjct: 810 MFENDLTVD 818
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 129/319 (40%), Gaps = 45/319 (14%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYAL-KGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
A E M G+ PN F L + YA+ + ++ + +E + +E G +V YS LI
Sbjct: 272 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSE-GLEMTVVTYSILI 330
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
+GY K + ESA + + + + Y ++ Q+GN+ L+ E
Sbjct: 331 AGYGKTNDAESADK----LFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVRE--- 383
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+E GI V ++ K + + + CG + Y + Y K +
Sbjct: 384 MEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGK 443
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
+A + ++ S G++ + Y LI I DF +AFS+F DM
Sbjct: 444 VPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDM-------------- 489
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
I +GL D + +N ++ AFCK G ++ A R RM
Sbjct: 490 IKSGLQP-----------DRAI-----------YNLLVEAFCKMGNMDRAIRIFERMKKE 527
Query: 539 QFEPNDQTYLSLINGYVTA 557
+ +P+++T+ +I G+ A
Sbjct: 528 RMQPSNRTFRPIIEGFAVA 546
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 155/390 (39%), Gaps = 45/390 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+ N + G C Q+V A+ +++ G P+ ++ LA +G ++
Sbjct: 328 RPSCCTYNTLISGLCKQ-QNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 386
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
EL M+ G + +V Y++LI G K E A + ++ S F + TY
Sbjct: 387 ELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELL------ESLVSSGFVPDVVTYT 440
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+V G + G + ++ K + V+ + ++ G D+AH I EM
Sbjct: 441 IIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYT---ALMEGLCRTGRVDEAHHIFKEM 497
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLV---------------------------- 426
+ C+ YV + YCK RT EA ++V
Sbjct: 498 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEI 557
Query: 427 ----MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
D++ G ++ Y+ +++ AF M A SY I+ G
Sbjct: 558 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 617
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
L + +P+ LD++++ + +N+++ FCK R +DA L+ MI +P
Sbjct: 618 LFKASKPKEARQVLDQMIQ-AGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDP 676
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
++ TY +LI+G + + HE+ R
Sbjct: 677 DNVTYNTLISGLSQTNRLGDAYELMHEMLR 706
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 11/235 (4%)
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
G + S F++ + ++ L+NG+ + + +++ +G D +I +
Sbjct: 117 GDRGFKHSTFTRNCF---LQTLLENGSSDRIPAMF---ERMLDAGYAPDSYTYHLVIKSL 170
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
+ DKA ++LD+ G + VY +A+CK R +A ++ +I S D
Sbjct: 171 CQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSP----DA 226
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
Y+A+I D A ++M E ++ +Y ++ GL + + + + L E
Sbjct: 227 IAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHE 286
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+V D V T +NSI+ CKAG+ E A L M P+ TY +LI+G
Sbjct: 287 MV-DRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISG 340
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/505 (18%), Positives = 199/505 (39%), Gaps = 66/505 (13%)
Query: 82 NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKN--PKL 139
+ TD+A + + + P NS+ + L +RA + + + E+N P
Sbjct: 275 SKTDKASEMLHEMVDRGVTPDTVTFNSI---MDGLCKAGKFERAHSLLAVMAERNCRPSC 331
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD-ICRKNSNFVAFL 198
+ T+ + L +N + A LV F + F+P + L D +C++
Sbjct: 332 CTYNTLISGLCKQQNVDRAKD---LVD-EFVSSGFVPDVVTYSILADGLCKRGR------ 381
Query: 199 KVFEECCRIALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVL 250
+DE + +K PN+ N ++G C ++ A +++E++
Sbjct: 382 ----------IDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKT-EKAYELLESLVSS 430
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G P+ ++ + +G +K +++ M + G + ++ Y++L+ G + G ++ A
Sbjct: 431 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 490
Query: 311 SRTI--------------LLCLGGGNMEQSDFSK--------------ETYCEVVKGFLQ 342
+ L G + S + + Y ++ G+ +
Sbjct: 491 HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCK 550
Query: 343 NGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
G + + N+ + + G V + ++ G D+A L+ M++ GC
Sbjct: 551 EGRLDEIPNVF---EDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 607
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+ Y + K + EA Q++ + +G+ D Y+ L+ + F A + +
Sbjct: 608 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 667
Query: 463 DMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKA 522
+M +A + +Y T+++GL + +R + E++ + V +N+II CK
Sbjct: 668 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 727
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTY 547
G L+ A + M E N TY
Sbjct: 728 GCLKQALLLMDHMTGHGVEANTVTY 752
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 191/484 (39%), Gaps = 40/484 (8%)
Query: 83 NTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEK--NPKLL 140
N D A ++ P VT S++A L + AF V + K P L+
Sbjct: 346 NVDRAKDLVDEFVSSGFVPDV-VTYSILA--DGLCKRGRIDEAFELVKEMSGKGCTPNLV 402
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
T +TL+ + A+ A+ L++ + + F+P + +VD K LK+
Sbjct: 403 ---TYNTLIDGLCKASKTEKAYELLESLVSSG-FVPDVVTYTIIVDGLCKEGRLDKALKM 458
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
E + P++ A +EG C V +A + + M + +
Sbjct: 459 VEGMLKRGC-------TPSVITYTALMEGLCR-TGRVDEAHHIFKEMV-----SKDCTAD 505
Query: 261 FLAYLYALKGL--QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LL 316
LAY+ + G + E + +++ + + Y++L+ GY K G L+ +
Sbjct: 506 ALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMA 565
Query: 317 CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
C G + +TY V+ G ++G V + + + +G V D II
Sbjct: 566 CRGCVP------NIKTYNIVMDGLCKHGKVDEAFPFL---ESMHSAGCVPDVVSYNIIID 616
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
+A +LD+M G Y + +CKE R +A ++ ++ +G+
Sbjct: 617 GLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDP 676
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENHRPELMAAF 495
D Y+ LI + A+ L +M R + +Y TI+ L + +
Sbjct: 677 DNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLL 736
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+D + VE T +N I CK GRL++A L M L+ ++ +Y ++I G
Sbjct: 737 MDHMTGHG-VEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLC 792
Query: 556 TAEQ 559
AEQ
Sbjct: 793 KAEQ 796
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 134/339 (39%), Gaps = 19/339 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ Y + ++ C + + A +++ V G +P S + L + G + +E
Sbjct: 158 PDSYTYHLVIKSLCQ-MNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALE 216
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ + S + Y+++I G+ + + + A + M + + + TY
Sbjct: 217 IFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFL------KEMNERKVAPDVFTYNI 266
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + + ++ E + G+ D I+ G ++AHS+L M
Sbjct: 267 LIDGLCKASKTDKASEMLHE---MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 323
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
C Y + CK+ A LV + SSG DV Y L +
Sbjct: 324 ERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRID 383
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-EVKTHDWNS 514
AF L ++M +Y T++ GL + + E L+ +V V +V T +
Sbjct: 384 EAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVT--YTI 441
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
I+ CK GRL+ A + + M+ P+ TY +L+ G
Sbjct: 442 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEG 480
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 166/374 (44%), Gaps = 57/374 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M+PN+ +A ++G C Q +A++V+E M GV P+ +F + A ++ L +KI
Sbjct: 280 MRPNVVTYSALIDGLCKS-QKFLEAKEVLEEMKTRGVTPD--AFTYSALIHGLCK-ADKI 335
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
E E ++ G + +V YSS+I + K G L A +T+ M + S +
Sbjct: 336 EEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTL------QEMRKQRKSPDV 389
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHS 389
TY V+ G + G + A +I+E +++ SG V+ V + +I+ + +A
Sbjct: 390 VTYNTVIDGLCKLGKI-AEAQVILE--QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQK 446
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+LD M GC+ + Y + CK R EA L+ + +G +V Y LI
Sbjct: 447 LLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 506
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
++ A + +MR A P L+
Sbjct: 507 KARKVDEAERVMEEMRNA------------------GCPPNLVT---------------- 532
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE--PNDQTYLSLINGYVTAEQYFSVLMMW 567
+N++++ C +GR+++A++ ++RM + E P+ TY +++N ++++ +
Sbjct: 533 --YNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLL 590
Query: 568 HEIKRKISTDGQKG 581
++K S+ ++G
Sbjct: 591 EQMKSTTSSQQEQG 604
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 154/349 (44%), Gaps = 25/349 (7%)
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV 292
+ + D + ++ + +G PN ++ L +A E+ ++L M E G +V
Sbjct: 156 AMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLV 215
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLA 350
Y+ L+ KL + +A + + GG F+ T+ +V GF + GNV
Sbjct: 216 TYNVLVDALCKLSMVGAAQDVVKKMIEGG------FAPNVMTFNSLVDGFCKRGNVD--- 266
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGII--SACVNLGLSD-----KAHSILDEMNACGCSVGL 403
+A+KL GI+V + + ++ SA ++ GL +A +L+EM G +
Sbjct: 267 ----DARKL--LGIMVAKGMRPNVVTYSALID-GLCKSQKFLEAKEVLEEMKTRGVTPDA 319
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y + CK + EA Q++ ++ SG DV Y ++I A S A ++
Sbjct: 320 FTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQE 379
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
MR+ R +Y T++ GL + + L+++ E V ++++I+ CK+
Sbjct: 380 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSD 439
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
L +A++ L RM P+ TY ++I+G + + +KR
Sbjct: 440 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 488
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 157/372 (42%), Gaps = 21/372 (5%)
Query: 209 LDENLDFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
LD +D ++ PN+ A + + + +A K++E M G PN ++ L
Sbjct: 163 LDGAMDHLRSMGCDPNVVTYTALIAAFARA-KKLEEAMKLLEEMRERGCPPNLVTYNVLV 221
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+ ++ M E GF+ ++ ++SL+ G+ K GN++ A + + + + G
Sbjct: 222 DALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMR 281
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
TY ++ G ++ ++ ++++ G+ D +I
Sbjct: 282 PNV----VTYSALIDGLCKSQKFLEAKEVL---EEMKTRGVTPDAFTYSALIHGLCKADK 334
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
++A +L M GC+ + VY + A+CK + EA + + ++ DV Y+
Sbjct: 335 IEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNT 394
Query: 444 LIEASITSQDFQSAFSLFRDMREA-RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE- 501
+I+ A + M+E+ + +Y T++ GL ++ LD + +
Sbjct: 395 VIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKA 454
Query: 502 --DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+P V + +II CK GRLE+A+ L+ M PN TY +LI+G A +
Sbjct: 455 GCNPDVVT----YTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARK 510
Query: 560 YFSVLMMWHEIK 571
+ E++
Sbjct: 511 VDEAERVMEEMR 522
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 139/339 (41%), Gaps = 14/339 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++ C L V A+ V++ M G PN +F L + +G + +
Sbjct: 212 PNLVTYNVLVDALCK-LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARK 270
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
L +M G +V YS+LI G K A + M+ + + TY
Sbjct: 271 LLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL------EEMKTRGVTPDAFTYSA 324
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + ++ ++ +++ SG D V II A G +A L EM
Sbjct: 325 LIHGLCKADKIEEAEQML---RRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR 381
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL-DVGNYDALIEASITSQDF 454
S + Y + CK + AEA ++ + SG L DV Y +I S
Sbjct: 382 KQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDML 441
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A L M +A +Y TI+ GL + R E A +L + ++ + +
Sbjct: 442 VEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE-EAEYLLQGMKRAGCAPNVVTYTT 500
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+I CKA ++++A+R + M PN TY +++NG
Sbjct: 501 LISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 136/303 (44%), Gaps = 17/303 (5%)
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT 313
P+ S+ + + G +EL M GF+ ++ +I+ G+L+ A
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDH 169
Query: 314 ILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG 373
L +G D + TY ++ F + ++ L+ E ++ +V +V
Sbjct: 170 -LRSMG------CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNV--- 219
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++ A L + A ++ +M G + + + + +CK +A +L+ + + G
Sbjct: 220 LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG 279
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ +V Y ALI+ SQ F A + +M+ + +Y ++ GL + + E
Sbjct: 280 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAE 339
Query: 494 AFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
L + P V V ++SIIHAFCK+G+L +A++TL+ M + P+ TY ++
Sbjct: 340 QMLRRMAGSGCTPDVVV----YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTV 395
Query: 551 ING 553
I+G
Sbjct: 396 IDG 398
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 117/284 (41%), Gaps = 56/284 (19%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+Y V+ GF G++ L+ ++++ +G D II+A N G D A +
Sbjct: 114 SYNIVISGFCNAGDLHAALELL---EEMKSAGFAPDAFTHTPIITAMANAGDLDGA---M 167
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
D + + GC + Y + A+ + + EA +L+ ++ G ++ Y+ L++A
Sbjct: 168 DHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKL 227
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+A + + M E G +MT
Sbjct: 228 SMVGAAQDVVKKMIEG------GFAPNVMT------------------------------ 251
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+NS++ FCK G ++DA++ L M+ PN TY +LI+G ++++ + E+K
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 311
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEM 615
+ T DAF Y+ + G A +E++++M
Sbjct: 312 TRGVTP------------DAFTYSALIHGLCKA--DKIEEAEQM 341
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 127/287 (44%), Gaps = 25/287 (8%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLAN 351
Y+ +ISG+ G+L +A + M+ + F+ + T+ ++ G++ G +
Sbjct: 115 YNIVISGFCNAGDLHAALELL------EEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD 168
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
+ + +P+ + +I+A ++A +L+EM GC L Y +
Sbjct: 169 HL-RSMGCDPNVVTYT-----ALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVD 222
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
A CK A +V + G +V +++L++ + A L M +
Sbjct: 223 ALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRP 282
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLD--EVVEDPRVEVKTHD---WNSIIHAFCKAGRLE 526
+Y ++ GL ++ + FL+ EV+E+ + T D ++++IH CKA ++E
Sbjct: 283 NVVTYSALIDGLCKSQK------FLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIE 336
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+A++ LRRM P+ Y S+I+ + + + E++++
Sbjct: 337 EAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQ 383
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 124/527 (23%), Positives = 217/527 (41%), Gaps = 45/527 (8%)
Query: 50 PPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLT-----ANSL----- 99
PPN Q Q+ + D+IT+L L S N +S T N L
Sbjct: 56 PPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN 115
Query: 100 -FPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL-LDFQTVHTLLGSMRNANT 157
KP TN L++L +++ LK +++ N + LD T + L+ ++ A+
Sbjct: 116 ELGFKPDTNFYNIALNALVEDNKLK--LVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQ 173
Query: 158 AAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMK 217
PA +++ M N P E+ F ++ F E L+ L K
Sbjct: 174 LRPAILMLEEM-ANHGLKPDEI-------------TFTTLMQGFIE--EGDLNGALKMKK 217
Query: 218 PNI-YAC---NAALEGCCYGL---QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
+ Y C N +++ G V +A + + +S G P++ +F L + G
Sbjct: 218 QMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIG 277
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
+++ M E GF + Y+SLISG KLG E A + + + + +
Sbjct: 278 NVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI----LRECSPNT 333
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY ++ + ++ +L A+ L G++ D +I D A +
Sbjct: 334 VTYNTLISALCKENEIEAATDL---ARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEM 390
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+EM GC Y + + C E R EA L+ ++ SSG + Y+ LI+
Sbjct: 391 FEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCK 450
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
S+ + A +F M + +Y T++ GL +N R E + +D+++ + ++
Sbjct: 451 SRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIME-GLKPDKF 509
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+NS++ FC+ G +E A ++ M EP+ TY +LI G A
Sbjct: 510 TYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRA 556
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 169/407 (41%), Gaps = 36/407 (8%)
Query: 71 LETNLHKSLLTNN------TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKR 124
L TN+ +L N +EA + ++ P + NSL+ + N+
Sbjct: 225 LLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRI---GNVND 281
Query: 125 AFASVVYVIEK--NPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGG 182
A V ++IEK +P D T ++L+ M A +++ M +
Sbjct: 282 ALDIVDFMIEKGFDP---DVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNT 338
Query: 183 FLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEK 242
+ +C++N ++ + RI + + L P++ N ++G C ++ A +
Sbjct: 339 LISALCKENE-----IEAATDLARILVSKGL---LPDVCTFNTLIQGLCLS-KNQDIAME 389
Query: 243 VIETMSVLGVRPNESSFGFLA-YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
+ E M G +P+E ++ L L + L+E ++ L+ M G + V Y++LI G
Sbjct: 390 MFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKE-MESSGCARNAVVYNTLIDGL 448
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKL 359
K +E A ME S+ TY ++ G +N V+ + L+ ++
Sbjct: 449 CKSRRIEDAEEIF------DQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLM---DQM 499
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
G+ D+ +++ +G +KA I+ M + GC + Y + C+ R
Sbjct: 500 IMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRV 559
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
A++L+ + G+ L Y+ +I+A + + LFR+M E
Sbjct: 560 DVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMME 606
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 165/394 (41%), Gaps = 55/394 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ ++ + G C + + AE+V+ M GVRPN ++ L + Y+ G+ ++ V
Sbjct: 257 PNVVTYSSLINGLC-KTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVR 315
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL--LCLGGGNMEQSDFSKETYCE 335
+ M+ + +S ++ K G ++ A R I + L G + +Y
Sbjct: 316 VFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA-RDIFDSMVLKGPKPDVI-----SYGA 369
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ G + G+ NL + G+V DR V +I+A LG+ DK+ + ++M
Sbjct: 370 LLHGYATAGCIAGMDNLF---NVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 426
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + + + + A+C+ R +A + + +G+ D Y LI+ +D
Sbjct: 427 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 486
Query: 456 SAFSLFRDM---------------------REARIYDLKGSY-LTIMTGLMENHRPELM- 492
A L DM +E R+ + K L I TG RP L+
Sbjct: 487 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG----QRPNLIT 542
Query: 493 ----------------AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
A L + +E VE + +N+++ +CK GR++DA R M+
Sbjct: 543 FNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDML 602
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+ +Y +++G A + M+HE+
Sbjct: 603 HKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 636
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 150/380 (39%), Gaps = 45/380 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP++ + A L G ++ + + M GV P+ F L YA G+ +K +
Sbjct: 361 KPDVISYGALLHGYATA-GCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSL 419
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------------SRTILLCLGGGN 322
+ M + G + ++ +S++IS + +LG L+ A + CL G
Sbjct: 420 LMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQ 479
Query: 323 MEQSDFSKET------------------YCEVVKGFLQNGNV---KGLANLIIEAQKLEP 361
+ D K + ++ + G V K + +LII + P
Sbjct: 480 CNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQ-RP 538
Query: 362 SGIVVDRSV-GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
+ I + V G+ ++ G +A +LD M + G + Y + YCK R
Sbjct: 539 NLITFNSLVDGYCLV------GNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRID 592
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
+A L D+ + L +Y+ ++ ++ A +F +M E+ + +Y T++
Sbjct: 593 DALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVL 652
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL N+ + A L E + V+ +N +I A K GR ++AK +
Sbjct: 653 GGLCRNNCTD-EANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGL 711
Query: 541 EPNDQTYLSLINGYVTAEQY 560
P TY +I + E +
Sbjct: 712 VPTILTYRVMITNLIKEESF 731
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 143/378 (37%), Gaps = 55/378 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSD-AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P IY N + CY D V + G+ P+ S+ L ++ +G +K
Sbjct: 187 PTIYTYNILIN--CYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAH 244
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+L M E G +V YSSLI+G K ++ A R + +G G + TY +
Sbjct: 245 DLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNN----MTYNCL 300
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM-- 394
+ G+ +G K + +++ S +V D ++A G +A I D M
Sbjct: 301 IHGYSTSGMWKESVRVF---KEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVL 357
Query: 395 -----------------NACGCSVGLG----------------VYVPTLKAYCKEHRTAE 421
GC G+ V+ + AY + +
Sbjct: 358 KGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDK 417
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
+ + D++ G+ D+ + +I A A F M + + Y ++
Sbjct: 418 SLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQ 477
Query: 482 GLMENHR-----PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
G N R EL++ L + + P ++ + SII+ CK GR+ + K + +I
Sbjct: 478 GQC-NRRDLVKAKELISDMLSKGIPPPCIKF----FTSIINNLCKEGRVAEGKDVVDLII 532
Query: 537 FLQFEPNDQTYLSLINGY 554
PN T+ SL++GY
Sbjct: 533 HTGQRPNLITFNSLVDGY 550
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 13/234 (5%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V++ + V++ + G RPN +F L Y L G ++ V L M G + Y++
Sbjct: 521 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 580
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV---KGLANLI 353
L+ GY K G ++ A L ++ + +Y ++ G Q K + + +
Sbjct: 581 LVDGYCKHGRIDDA----LTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 636
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
IE SG+ V ++ +D+A+ +L+++ + + + ++A
Sbjct: 637 IE------SGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAM 690
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
K R EA +L IS+ GL + Y +I I + F+ A +LF M ++
Sbjct: 691 FKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKS 744
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 87/193 (45%), Gaps = 3/193 (1%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G DKAH + +M G + Y + CK +A +++ + +G++ + Y
Sbjct: 238 GEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTY 297
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVV 500
+ LI TS ++ + +F++M + + G+ + MT L ++ R E F V+
Sbjct: 298 NCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVL 357
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+ P+ +V + + +++H + AG + M+ P+ + +LIN Y
Sbjct: 358 KGPKPDVIS--YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMM 415
Query: 561 FSVLMMWHEIKRK 573
L+M+ ++ ++
Sbjct: 416 DKSLLMFEDMTKQ 428
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 183/443 (41%), Gaps = 57/443 (12%)
Query: 198 LKVFE---ECCRIALDENLDFMKPNI--YACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
L VFE ECC P+I Y C L + V+ A + + M G+
Sbjct: 437 LIVFERLKECC----------FTPSIISYGC---LINLYVKIGKVAKAIAISKEMESSGI 483
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEF---------GFSSQMVFYSSLISGYVK 303
+ N ++ L + G + L N F G Y+ LI + K
Sbjct: 484 KHNNKTYSML-----ISGF----IHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCK 534
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
+GN++ A R IL + M+ S+ + +++GF G++K +++ + SG
Sbjct: 535 MGNMDRAIR-ILEKMQKERMQPSN---RAFRPIIEGFAVAGDMKRALDIL---DLMRRSG 587
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+I + ++A S+L++M+ G + Y ++ Y A+A
Sbjct: 588 CAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAF 647
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+ I GL+LDV Y+ L+ A S QSA ++ R+M +I Y ++ G
Sbjct: 648 EYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGW 707
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
A + ++ ED V H + S I+A CKAG ++ A+ + M + +PN
Sbjct: 708 ARRGDVWEAADLMKQMKEDG-VPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPN 766
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFE----HNLVDAFL--YALV 597
+TY +LI G+ A L + E+K G+K + H LV + L ++
Sbjct: 767 LKTYTTLIKGWARASLPDRALKCFEEMK-------LAGLKPDEAAYHCLVTSLLSRATVM 819
Query: 598 KGGFFDAVMQVVEKSQEMKVFVD 620
+G + ++ V + E + VD
Sbjct: 820 EGSTYTGILSVCREMFENDLTVD 842
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 155/417 (37%), Gaps = 44/417 (10%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A E M G+ PN F L + YA+ + M G +V YS LIS
Sbjct: 296 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILIS 355
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK- 358
G+ K+ + +SA L N+ D + Y ++ Q+GN+ L+ E ++
Sbjct: 356 GFGKINDTQSADN--LFKEAKTNL--GDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEED 411
Query: 359 ------------LEPSGIVVDRS------------------VGFG-IISACVNLGLSDKA 387
+ I+ D + +G +I+ V +G KA
Sbjct: 412 GIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKA 471
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+I EM + G Y + + H A ++ ++ SGLQ D Y+ LIEA
Sbjct: 472 IAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEA 531
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ A + M++ R+ ++ I+ G + LD ++
Sbjct: 532 FCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILD-LMRRSGCAP 590
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N++IH + ++E A L +M PN+ TY ++ GY +
Sbjct: 591 TVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYF 650
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+IK + G+K + + + L A K G + + V + K+ + + Y
Sbjct: 651 TKIK-------EGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVY 700
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 145/350 (41%), Gaps = 41/350 (11%)
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
SFG L G EK +L + EFGFS +V Y++LI G K G +E A + +
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA-KDLFFE 223
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
+G + ++ TY ++ G +NG K + +K++ G+ + +++
Sbjct: 224 MGKLGLVANE---RTYTVLINGLFKNGVKKQGFEMY---EKMQEDGVFPNLYTYNCVMNQ 277
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
G + A + DEM G S + Y + C+E + EA ++V + S G+ +
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
+ Y+ LI+ A SL RD++ + +Y +++G A +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 498 EVVE-----------------------DPRVEVK-----------THDWNSIIHAFCKAG 523
E+ E + ++++ H ++ +IH FC G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++ +A R + M+ EPN+ Y ++I GY + L + E++ K
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 3/213 (1%)
Query: 362 SGIVVDRSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
S +V+D FGI I C G +K+ +L E+ G S + +Y + CK+
Sbjct: 157 SKVVLD-VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
+A L ++ GL + Y LI + + F ++ M+E ++ +Y +M
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
L ++ R + DE+ E V +N++I C+ +L +A + + +M
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERG-VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
PN TY +LI+G+ + L + ++K +
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR 367
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 13/265 (4%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
NI N + G C ++ +++A KV++ M G+ PN ++ L + G K + L
Sbjct: 302 NIVTYNTLIGGLCREMK-LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL 360
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEV 336
+ G S +V Y+ L+SG+ + G+ A++ + ME+ SK TY +
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV------KEMEERGIKPSKVTYTIL 414
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ F ++ N++ L + ++L G+V D +I G ++A + M
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEEL---GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
C +Y + YCKE + A +L+ ++ L +V +Y +IE + +
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 457 AFSLFRDMREARIYDLKGSYLTIMT 481
A L M ++ I D S L++++
Sbjct: 532 AERLVEKMIDSGI-DPSTSILSLIS 555
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 136/344 (39%), Gaps = 29/344 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ ++GCC + + A+ + M LG+ NE ++ L G++++ E
Sbjct: 196 PNVVIYTTLIDGCCKKGE-IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE 254
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M E G + Y+ +++ K G + A + M + S C +V
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF------DEMRERGVS----CNIV 304
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI----------ISACVNLGLSDKA 387
N + GL KL + VVD+ GI I +G KA
Sbjct: 305 T---YNTLIGGLC----REMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
S+ ++ + G S L Y + +C++ T+ A ++V ++ G++ Y LI+
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
S + + A L M E + +Y ++ G + + +VE E
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK-NCEP 476
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+N++I +CK G A + L+ M + PN +Y +I
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 124/312 (39%), Gaps = 17/312 (5%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
E M GV PN ++ + G + ++ M E G S +V Y++LI G +
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI--IEAQKLE 360
L A++ + M+ + TY ++ GF G + +L ++++ L
Sbjct: 317 MKLNEANKVV------DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
PS + + ++S G + A ++ EM G Y + + +
Sbjct: 371 PSLVTYNI-----LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
+A QL + + GL DV Y LI A LF+ M E + Y T++
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
G + L E+ E+ + + +I CK + ++A+R + +MI
Sbjct: 486 LGYCKEGSSYRALKLLKEM-EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Query: 541 EPNDQTYLSLIN 552
+P+ + LSLI+
Sbjct: 545 DPS-TSILSLIS 555
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 125/304 (41%), Gaps = 25/304 (8%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-- 271
D + PN+Y N + C ++ DA +V + M GV N + Y + GL
Sbjct: 262 DGVFPNLYTYNCVMNQLCKDGRT-KDAFQVFDEMRERGVSCN-----IVTYNTLIGGLCR 315
Query: 272 QEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
+ K+ E ++++ G + ++ Y++LI G+ +G L + + LC +++
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL---GKALSLCR---DLKSRGL 369
Query: 329 SKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
S TY +V GF + G+ G A ++ E +E GI + +I +K
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKE---MEERGIKPSKVTYTILIDTFARSDNMEK 426
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + M G + Y + +C + + EA++L + + + Y+ +I
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DP 503
A L ++M E + SY ++ L + + + ++++++ DP
Sbjct: 487 GYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Query: 504 RVEV 507
+
Sbjct: 547 STSI 550
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 166/394 (42%), Gaps = 55/394 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ ++ + G C + + AE+V+ M GVRPN ++ L + Y+ G+ ++ V
Sbjct: 186 PNVVTYSSLINGLC-KTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVR 244
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL--LCLGGGNMEQSDFSKETYCE 335
+ M+ + +S ++ K G ++ A R I + L G + D +Y
Sbjct: 245 VFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA-RDIFDSMVLKG---PKPDVI--SYGA 298
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ G + G+ NL + G+V DR V +I+A LG+ DK+ + ++M
Sbjct: 299 LLHGYATAGCIAGMDNLF---NVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 355
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + + + + A+C+ R +A + + +G+ D Y LI+ +D
Sbjct: 356 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 415
Query: 456 SAFSLFRDM---------------------REARIYDLKGSY-LTIMTGLMENHRPELM- 492
A L DM +E R+ + K L I TG RP L+
Sbjct: 416 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG----QRPNLIT 471
Query: 493 ----------------AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
A L + +E VE + +N+++ +CK GR++DA R M+
Sbjct: 472 FNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDML 531
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+ +Y +++G A + M+HE+
Sbjct: 532 HKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 565
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 150/380 (39%), Gaps = 45/380 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP++ + A L G ++ + + M GV P+ F L YA G+ +K +
Sbjct: 290 KPDVISYGALLHGYATA-GCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSL 348
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------------SRTILLCLGGGN 322
+ M + G + ++ +S++IS + +LG L+ A + CL G
Sbjct: 349 LMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQ 408
Query: 323 MEQSDFSKET------------------YCEVVKGFLQNGNV---KGLANLIIEAQKLEP 361
+ D K + ++ + G V K + +LII + P
Sbjct: 409 CNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQ-RP 467
Query: 362 SGIVVDRSV-GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
+ I + V G+ ++ G +A +LD M + G + Y + YCK R
Sbjct: 468 NLITFNSLVDGYCLV------GNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRID 521
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
+A L D+ + L +Y+ ++ ++ A +F +M E+ + +Y T++
Sbjct: 522 DALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVL 581
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL N+ + A L E + V+ +N +I A K GR ++AK +
Sbjct: 582 GGLCRNNCTD-EANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGL 640
Query: 541 EPNDQTYLSLINGYVTAEQY 560
P TY +I + E +
Sbjct: 641 VPTILTYRVMITNLIKEESF 660
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 143/378 (37%), Gaps = 55/378 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSD-AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P IY N + CY D V + G+ P+ S+ L ++ +G +K
Sbjct: 116 PTIYTYNILIN--CYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAH 173
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+L M E G +V YSSLI+G K ++ A R + +G G + TY +
Sbjct: 174 DLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNN----MTYNCL 229
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM-- 394
+ G+ +G K + +++ S +V D ++A G +A I D M
Sbjct: 230 IHGYSTSGMWKESVRVF---KEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVL 286
Query: 395 -----------------NACGCSVGLG----------------VYVPTLKAYCKEHRTAE 421
GC G+ V+ + AY + +
Sbjct: 287 KGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDK 346
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
+ + D++ G+ D+ + +I A A F M + + Y ++
Sbjct: 347 SLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQ 406
Query: 482 GLMENHR-----PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
G N R EL++ L + + P ++ + SII+ CK GR+ + K + +I
Sbjct: 407 GQC-NRRDLVKAKELISDMLSKGIPPPCIKF----FTSIINNLCKEGRVAEGKDVVDLII 461
Query: 537 FLQFEPNDQTYLSLINGY 554
PN T+ SL++GY
Sbjct: 462 HTGQRPNLITFNSLVDGY 479
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 87/193 (45%), Gaps = 3/193 (1%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G DKAH + +M G + Y + CK +A +++ + +G++ + Y
Sbjct: 167 GEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTY 226
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVV 500
+ LI TS ++ + +F++M + + G+ + MT L ++ R E F V+
Sbjct: 227 NCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVL 286
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+ P+ +V + + +++H + AG + M+ P+ + +LIN Y
Sbjct: 287 KGPKPDVIS--YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMM 344
Query: 561 FSVLMMWHEIKRK 573
L+M+ ++ ++
Sbjct: 345 DKSLLMFEDMTKQ 357
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 13/234 (5%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V++ + V++ + G RPN +F L Y L G ++ V L M G + Y++
Sbjct: 450 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 509
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV---KGLANLI 353
L+ GY K G ++ A L ++ + +Y ++ G Q K + + +
Sbjct: 510 LVDGYCKHGRIDDA----LTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 565
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
IE SG+ V ++ +D+A+ +L+++ + + + ++A
Sbjct: 566 IE------SGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAM 619
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
K R EA +L IS+ GL + Y +I I + F+ A +LF M ++
Sbjct: 620 FKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKS 673
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 170/391 (43%), Gaps = 23/391 (5%)
Query: 193 NFVAFLKVFEECCRIALDENL-------DFMKPNIYACNAALEGCCYGLQSVSDAEKVIE 245
++ A L VF + RI L + +KP++ + G C + + +A+ V +
Sbjct: 219 SYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCK-MGMIENAKNVFD 277
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF-GFSSQMVFYSSLISGYVKL 304
M G +PN ++ + + KGL E +++ M E V Y++LI GY K
Sbjct: 278 EM---GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKR 334
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
G LE A + + + N E + TY ++ G NGNV ++ ++ +G+
Sbjct: 335 GELEEAMKYMEE-MVSRNCEPNVL---TYNAIIYGLCLNGNVDEAKRMMT---RMRLNGL 387
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ + I+ +G D A L EM G Y + YCK + +A
Sbjct: 388 KDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAIS 447
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L+ ++ S G+ V +++A+ + S A + R M++ SY T++ GL
Sbjct: 448 LLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLC 507
Query: 485 E-NHRPELMAAFLDEVVEDP-RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
+ R + F+D++ + ++ + W ++ +C+ G + A R M+ + +
Sbjct: 508 KAKGRMHEVEEFVDDMCRNGHHLDASMYSW--LVKGYCEDGNADMAMRLFCEMLDMGYVI 565
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
N +++L+ + G E+ F V + E+ R+
Sbjct: 566 NLESFLAFVKGLSAKEKAFEVEKFFEEMSRR 596
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 149/353 (42%), Gaps = 65/353 (18%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
V+P+ S++ + Y G+ E +++ +E G +V Y+++I+G+ K G +ESA
Sbjct: 249 VKPDVSTYTTIIRGYCKMGMIENA---KNVFDEMGCKPNLVTYNTMINGFCKKGLMESAM 305
Query: 312 RTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVD 367
+ + E D +T Y ++ G+ + G ++ + E ++ EP+ ++
Sbjct: 306 KIV-----DQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPN-VLTY 359
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
++ +G+ C+N G D+A ++ M G + + LK C + +A + +
Sbjct: 360 NAIIYGL---CLN-GNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLK 415
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
++ G++ D Y ++ A SL ++M+ I
Sbjct: 416 EMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGI------------------ 457
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+P V +N++ ++G+ + A LR+M L PN +Y
Sbjct: 458 --------------NPSVS----SFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSY 499
Query: 548 LSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYA-LVKG 599
++I+G A+ HE++ + + G H+L DA +Y+ LVKG
Sbjct: 500 STVIDGLCKAKGRM------HEVEEFVDDMCRNG----HHL-DASMYSWLVKG 541
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 14/251 (5%)
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D S II +G+ + A ++ DEM GC L Y + +CK+ A ++V
Sbjct: 252 DVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAMKIV 308
Query: 427 MDISSS-GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
++ + D Y LI+ + + A +M +Y I+ GL
Sbjct: 309 DQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCL 368
Query: 486 NHRPELMAAFLDEV-VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
N + + + + + V TH SI+ C G+L+DA R L+ M+ L E +
Sbjct: 369 NGNVDEAKRMMTRMRLNGLKDNVATH--TSILKGLCVVGKLDDAARHLKEMVGLGMEADA 426
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDA 604
+ Y ++N Y + + + E+K +GI + +A LV+ G D
Sbjct: 427 KAYGVVVNEYCKIGKADDAISLLKEMK-------SRGINPSVSSFNAVFRILVESGKTDK 479
Query: 605 VMQVVEKSQEM 615
++ + +++
Sbjct: 480 AGLILRQMKQL 490
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 11/178 (6%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGL-QLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y L + K +R A + I G+ + DV Y +I ++A ++F +M
Sbjct: 220 YNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM 279
Query: 465 R-EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
+ + +Y T++ G + E +D++ E T + ++I +CK G
Sbjct: 280 GCKPNLV----TYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRG 335
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLI-----NGYVTAEQYFSVLMMWHEIKRKIST 576
LE+A + + M+ EPN TY ++I NG V + M + +K ++T
Sbjct: 336 ELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVAT 393
>gi|384251959|gb|EIE25436.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 627
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 199/499 (39%), Gaps = 46/499 (9%)
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGC----CYGLQ 235
W + +C++ C +A + + + NAAL C GL
Sbjct: 130 WSSVISSLCKQRRKGA-------PCAHLAYELWRELDASGLATGNAALYAAGMNACIGLG 182
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFL----AYLYALKGLQEKIVELESLMNEFGFSSQM 291
V +A ++ TM G+R + ++ L A ++L +Q + ++E L + +
Sbjct: 183 YVDEAAGLLRTMQGWGMRADVRAYNILLKGQANAHSLSAMQATMADMERLQ----VAPSV 238
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLAN 351
V Y+ LI +V G LE A+ + G +Y ++KGF Q V A
Sbjct: 239 VTYNILIDAFVNEGLLEQAAAKLQEAQKLG----LRLDLWSYNTLIKGFCQANQVAD-AR 293
Query: 352 LIIEAQKLE---PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
++EA KL+ P+ VV + ++ CV G A +L +M G +
Sbjct: 294 DVLEAMKLQNVQPN--VVTYTT---LVDGCVRAGDLFLAEEMLRDMQFMGVPPNTVTFNI 348
Query: 409 TLKAYCK--EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
L+ YC+ +A + + + +G+ ++ L+ A ++ D + LFR +
Sbjct: 349 MLRGYCQWSTRPIQDALETLRSMGMAGVVPSTDTFNTLMGACLSRGDPGAVPRLFRRLIS 408
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
SY +++T L RPE + D RV V N+++ A + GR+
Sbjct: 409 LGHTPDALSYTSLITSLTRLGRPEDAVLAFRAMEADARVAVDLAALNAVVDALARCGRMG 468
Query: 527 DAKRTLRRMIFL----QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGI 582
DA+ L R L P + Y +L+ Y + L + E ++G
Sbjct: 469 DAEDQLERATELCRRRGRPPPLEAYGALLAEYARRRDADAALAVLQEFF-------ERGG 521
Query: 583 KFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVA-KLR 641
+ + D + ++ G F MQ V + + VDK + K+A + ++ A + R
Sbjct: 522 TPDDQMFDTVMDLCMRTGEFRRAMQAVRAMEAVGRQVDKARIKRALEDMMRRQSAALQGR 581
Query: 642 KRNFKKMEALIAFKNWAGL 660
+R + E L K W G+
Sbjct: 582 QRRRSRNEGLERLKFWLGI 600
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA---------- 377
+ TY ++ G Q G + + + L+ SG+ + +IS+
Sbjct: 90 YQYSTYQALITGAFQAGEAY---DAVQAFRDLQSSGLTPNVITWSSVISSLCKQRRKGAP 146
Query: 378 CVNLGLSDKAHSILDEMNACGCSVG-LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
C +L A+ + E++A G + G +Y + A EA L+ + G++
Sbjct: 147 CAHL-----AYELWRELDASGLATGNAALYAAGMNACIGLGYVDEAAGLLRTMQGWGMRA 201
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
DV Y+ L++ + + + DM ++ +Y ++ + E AA L
Sbjct: 202 DVRAYNILLKGQANAHSLSAMQATMADMERLQVAPSVVTYNILIDAFVNEGLLEQAAAKL 261
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
E + + + +N++I FC+A ++ DA+ L M +PN TY +L++G V
Sbjct: 262 QEA-QKLGLRLDLWSYNTLIKGFCQANQVADARDVLEAMKLQNVQPNVVTYTTLVDGCVR 320
Query: 557 AEQYFSVLMMWHEIK 571
A F M +++
Sbjct: 321 AGDLFLAEEMLRDMQ 335
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 103/253 (40%), Gaps = 35/253 (13%)
Query: 83 NTDEAWKSFKSLTA-NSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVI-------- 133
T + W + A N L + +SL A +++ D L+ A + V Y I
Sbjct: 192 RTMQGWGMRADVRAYNILLKGQANAHSLSAMQATMADMERLQVAPSVVTYNILIDAFVNE 251
Query: 134 ----------EKNPKL---LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELW 180
++ KL LD + +TL+ AN A A +++ M K + P +
Sbjct: 252 GLLEQAAAKLQEAQKLGLRLDLWSYNTLIKGFCQANQVADARDVLEAM-KLQNVQPNVVT 310
Query: 181 GGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFM--KPNIYACNAALEGCC-YGLQSV 237
LVD C + + FL EE R ++ FM PN N L G C + + +
Sbjct: 311 YTTLVDGCVRAGDL--FLA--EEMLR-----DMQFMGVPPNTVTFNIMLRGYCQWSTRPI 361
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
DA + + +M + GV P+ +F L +G + L + G + + Y+SL
Sbjct: 362 QDALETLRSMGMAGVVPSTDTFNTLMGACLSRGDPGAVPRLFRRLISLGHTPDALSYTSL 421
Query: 298 ISGYVKLGNLESA 310
I+ +LG E A
Sbjct: 422 ITSLTRLGRPEDA 434
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 188/446 (42%), Gaps = 18/446 (4%)
Query: 182 GFLVDICRKNSNFVAFLK--VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD 239
G + D N+ A LK + +E + LD + PN + N + G C L + +
Sbjct: 243 GCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCR-LGLLKE 301
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A KVIE M+ + P ++ L + G ++ + M + +V Y++LI
Sbjct: 302 ATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLID 361
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
G + + S + + + + + TY ++K + GN+ + K+
Sbjct: 362 GCSQWRD----SSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTL---DKM 414
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
E +G+ D +I A G KA ++DEM + G + L C E +
Sbjct: 415 EENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKL 474
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
EA L+ S G LD +Y LI + A +L+ +M+E +I +Y ++
Sbjct: 475 DEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSV 534
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ GL ++ + + L+E++E+ V +T +N IIH FC G +E A + MI
Sbjct: 535 IGGLCQSRKVDQAIDKLNEMLENGLVPDET-TYNIIIHGFCLEGNVEKAFQFHNEMIENL 593
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKG 599
F+P+ T L+ G L +++ + KG + + + +L K
Sbjct: 594 FKPDVYTCNILLRGLCREGMLEKALKLFNTLV-------SKGKDIDVVTYNTIISSLCKE 646
Query: 600 GFFDAVMQVVEKSQEMKVFVDKWKYK 625
G F+ ++ + + K+ D++ YK
Sbjct: 647 GKFENAYDLLTEMEAKKLGPDQYTYK 672
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 163/410 (39%), Gaps = 80/410 (19%)
Query: 217 KPNIYACNAALEGCCY--GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+PN+ CN + S+ A +V++ LGV PN +SF L Y Y L+ +
Sbjct: 172 RPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKD 231
Query: 275 IVELESLMNEFGFSSQMVFYSS-----------------------------------LIS 299
++ + M+EFG V Y++ L+
Sbjct: 232 ALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVC 291
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
GY +LG L+ A++ I + + N+ + + TY +V GF +G + + E +K+
Sbjct: 292 GYCRLGLLKEATKVIEI-MTRNNLLPTVW---TYNMLVNGFCNDGKIDEAFRIRDEMEKM 347
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
++ D +I C S + +S+++EM+ G Y LK CK+
Sbjct: 348 ---NVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNM 404
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI---------- 469
EAT + + +GL D Y+ LI A + AF + +M +
Sbjct: 405 TEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTI 464
Query: 470 -------------YDL------KG------SYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
Y+L +G SY ++ G ++ + + DE+ E +
Sbjct: 465 LHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKER-Q 523
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ T +NS+I C++ +++ A L M+ P++ TY +I+G+
Sbjct: 524 IMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGF 573
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 198/501 (39%), Gaps = 60/501 (11%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTV 145
EA K + +T N+L P+ N L+ + ++ + AF + +EK L D T
Sbjct: 301 EATKVIEIMTRNNLLPTVWTYNMLV---NGFCNDGKIDEAF-RIRDEMEKMNVLPDVVTY 356
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECC 205
+TL+ ++ ++L++ M K + L +C+K N ++
Sbjct: 357 NTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKK-GNMTEATTTLDK-- 413
Query: 206 RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
++EN + P+ N + C + A ++++ M+ G++ + + + +
Sbjct: 414 ---MEEN--GLSPDCVTYNTLIGAYCKA-GKMGKAFRMMDEMTSKGLKIDTWTLNTILHC 467
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
++ ++ L ++ G+ V Y LI GY K E R + L M++
Sbjct: 468 LCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKD---EKGDRALNL---WDEMKE 521
Query: 326 SDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
S TY V+ G Q+ V I + ++ +G+V D + II G
Sbjct: 522 RQIMPSTITYNSVIGGLCQSRKVD---QAIDKLNEMLENGLVPDETTYNIIIHGFCLEGN 578
Query: 384 SDKAHSILDEM-------NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
+KA +EM + C++ L+ C+E +A +L + S G +
Sbjct: 579 VEKAFQFHNEMIENLFKPDVYTCNI-------LLRGLCREGMLEKALKLFNTLVSKGKDI 631
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
DV Y+ +I + F++A+ L +M ++ + +Y I+ L + R + F
Sbjct: 632 DVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFT 691
Query: 497 DEVVEDPRV----------------EVKTH-DWNSI-----IHAFCKAGRLEDAKRTLRR 534
++VE V EV H D+ SI I+ C + +DA
Sbjct: 692 LKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVE 751
Query: 535 MIFLQFEPNDQTYLSLINGYV 555
+ N TYL+L+ G +
Sbjct: 752 VTKEGVALNKYTYLNLMEGLI 772
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 150/366 (40%), Gaps = 16/366 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAE---KVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
P++Y N+ + +GL V E K M G+ PNE ++ L + Y G E
Sbjct: 500 PDLYCYNSLI----FGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 555
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+L M + G V Y L+ Y K ++E S T L G M Y
Sbjct: 556 AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVM----LDNRIYG 611
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ +GN++ ++ +E +G V D V +IS +KA ILDEM
Sbjct: 612 ILIHNLSSSGNMEAAFRVL---SGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 668
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ G + Y + CK + A + I + GL + Y +LI+ S D
Sbjct: 669 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 728
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
+AF L+ +M I Y + TG E ++E+ R +N+
Sbjct: 729 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFL--RGHASISSFNN 786
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
++ FCK G++++ + L ++ PN T ++I+G A + V ++ E+++K
Sbjct: 787 LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKT 846
Query: 575 STDGQK 580
S +
Sbjct: 847 SESAAR 852
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 166/393 (42%), Gaps = 33/393 (8%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D +P+ N +EG + S DA +++ M G+ PN ++ + + G E
Sbjct: 391 DSHRPDTITYNLIIEGH-FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPE 449
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
K +L M G Y+ LISGY + GN+ L C M + + + Y
Sbjct: 450 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVS------LACEIFDKMTKVNVLPDLY 503
Query: 334 C--EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
C ++ G + G V+ + Q+ G++ + G+I + G + A ++
Sbjct: 504 CYNSLIFGLSKVGRVEESTKYFAQMQE---RGLLPNEFTYSGLIHGYLKNGDLESAEQLV 560
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
M G +Y+ L++Y K + + + G+ LD Y LI +S
Sbjct: 561 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 620
Query: 452 QDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEV 507
+ ++AF + + + + D+ Y ++++GL + E LDE+ + DP +
Sbjct: 621 GNMEAAFRVLSGIEKNGSVPDVH-VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC 679
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N++I CK+G + A+ ++ PN TY SLI+G + ++
Sbjct: 680 ----YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLY 735
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
+E+ ++T GI DAF+Y+++ G
Sbjct: 736 NEM---LAT----GIT-----PDAFVYSVLTTG 756
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 140/334 (41%), Gaps = 13/334 (3%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN 283
+ALE C ++ A+KV+ M G N ++ L G E+ + M
Sbjct: 226 GSALEAYCK-VREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN 343
++G Y +LI+G K + ++ +L + ++ + Y ++ GF++
Sbjct: 285 DYGLVPDGFTYGALINGLCK-SRRSNEAKALLDEMSCAELKPNVV---VYANLIDGFMRE 340
Query: 344 GNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
GN +I E A ++P+ I D ++ +G D+A +L +M
Sbjct: 341 GNADEAFKMIKEMVAAGVQPNKITYDN-----LVRGLCKMGQMDRASLLLKQMVRDSHRP 395
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
Y ++ + + H +A +L+ ++ ++G+ +V Y +I S + + A L
Sbjct: 396 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 455
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
+M + Y +++G L D++ + V + +NS+I K
Sbjct: 456 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK-VNVLPDLYCYNSLIFGLSK 514
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
GR+E++ + +M PN+ TY LI+GY+
Sbjct: 515 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 548
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 13/205 (6%)
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
HS+L A S G + L+AYCK A ++++++ G L+ Y+ LI
Sbjct: 209 HSVLQR--AVEGSAARGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAG 266
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV---EDPR 504
S + AF +DM + + +Y ++ GL ++ R A LDE+ P
Sbjct: 267 LCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPN 326
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
V V + ++I F + G ++A + ++ M+ +PN TY +L+ G Q
Sbjct: 327 VVV----YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRAS 382
Query: 565 MMWHEIKRKISTDGQKGIKFEHNLV 589
++ ++ R D + +NL+
Sbjct: 383 LLLKQMVR----DSHRPDTITYNLI 403
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/394 (19%), Positives = 150/394 (38%), Gaps = 86/394 (21%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KPN+ ++G + +A K+I+ M GV+PN+
Sbjct: 323 LKPNVVVYANLIDGFMRE-GNADEAFKMIKEMVAAGVQPNK------------------- 362
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ Y +L+ G K+G ++ AS +LL + + D TY
Sbjct: 363 ----------------ITYDNLVRGLCKMGQMDRAS--LLLKQMVRDSHRPD--TITYNL 402
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+++G ++ + K L+ E + S V S+ +I G +KA +L+EM
Sbjct: 403 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSI---MIHGLCQSGEPEKASDLLEEMT 459
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G VY P + YC+E + A ++ ++ + D+ Y++LI +
Sbjct: 460 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 519
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+ F M+E GL+ N ++ +
Sbjct: 520 ESTKYFAQMQE--------------RGLLPNE----------------------FTYSGL 543
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
IH + K G LE A++ ++RM+ +PND Y+ L+ Y ++ ++
Sbjct: 544 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI-------EKVSSTFK 596
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVV 609
+ +G+ ++ + ++ L G +A +V+
Sbjct: 597 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL 630
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 102/512 (19%), Positives = 182/512 (35%), Gaps = 85/512 (16%)
Query: 28 PSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEA 87
P LY + IF L + ++ Q Q++ L N + +H L + + A
Sbjct: 500 PDLYCY-NSLIFGLSKVGRVEESTKYFAQMQERGLLP--NEFTYSGLIHGYLKNGDLESA 556
Query: 88 WKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHT 147
+ + + L P+ + L+ D + F S++ +LD +
Sbjct: 557 EQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML----DQGVMLDNRIYGI 612
Query: 148 LLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRI 207
L+ ++ ++ AF ++ + KN ++ + +C+ AF + +E +
Sbjct: 613 LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF-GILDEMSKK 671
Query: 208 ALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
+D PNI NA ++G C +S A V ++ G+ PN ++ L
Sbjct: 672 GVD-------PNIVCYNALIDGLCKS-GDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 723
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
G L + M G + YS L +G G+LE A I G+ S
Sbjct: 724 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS 783
Query: 328 FSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
F+ +V GF + G ++ L +I + L P+ + ++ IIS G
Sbjct: 784 FNN-----LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN-----IISGLSEAGKLS 833
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG-LQLDVGNYDAL 444
+ H+I E L+ E + L MD+ + G + LDV D +
Sbjct: 834 EVHTIFVE----------------LQQKTSESAARHFSSLFMDMINQGKIPLDV--VDDM 875
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLK-GSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
I + A + RD+ A+ + SYL I+ L
Sbjct: 876 IRDHCKEGNLDKAL-MLRDVIVAKSAPMGCSSYLAIVDNL-------------------- 914
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
C+ G+L +A L+ M
Sbjct: 915 ----------------CRKGKLSEALNLLKEM 930
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 165/416 (39%), Gaps = 31/416 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAE---KVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
P++Y N+ + +GL V E K M G+ PNE ++ L + Y G E
Sbjct: 522 PDLYCYNSLI----FGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 577
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+L M + G V Y L+ Y K ++E S T L G M Y
Sbjct: 578 AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVM----LDNRIYG 633
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ +GN++ ++ +E +G V D V +IS +KA ILDEM
Sbjct: 634 ILIHNLSSSGNMEAAFRVL---SGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 690
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ G + Y + CK + A + I + GL + Y +LI+ S D
Sbjct: 691 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 750
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
+AF L+ +M I Y + TG E ++E+ R +N+
Sbjct: 751 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFL--RGHASISSFNN 808
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
++ FCK G++++ + L ++ PN T ++I+G A + V ++ E+++K
Sbjct: 809 LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKT 868
Query: 575 STDGQKGI-----------KFEHNLVDAFLYALVKGGFFDAVMQ----VVEKSQEM 615
S + K ++VD + K G D + +V KS M
Sbjct: 869 SESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPM 924
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 150/389 (38%), Gaps = 72/389 (18%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL--AYLYALKGLQE 273
M P+I CNA L+ +++ KV E M G+ P+ ++ L AY +
Sbjct: 205 MAPSIRCCNALLKDLLRA-DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTA 263
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK--E 331
K V +E M E G V Y+ LI+G LC G E F K E
Sbjct: 264 KKVLVE--MRERGCGLNTVTYNVLIAG---------------LCRSGAVEEAFGFKKDME 306
Query: 332 TYCEVVKGFLQNGNVKGL--------ANLIIE---AQKLEPSGIVVDRSVGFGIISACVN 380
Y V GF + GL A +++ +L+P+ +V +I +
Sbjct: 307 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN-----LIDGFMR 361
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G +D+A ++ EM A G Y ++ CK + A+ L+ + + D
Sbjct: 362 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 421
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y+ +IE + AF L +M A I +Y ++ GL ++ PE + L+E+
Sbjct: 422 YNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 481
Query: 501 E------------------------------DPRVEVKT----HDWNSIIHAFCKAGRLE 526
D +V + +NS+I K GR+E
Sbjct: 482 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 541
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++ + +M PN+ TY LI+GY+
Sbjct: 542 ESTKYFAQMQERGLLPNEFTYSGLIHGYL 570
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 163/419 (38%), Gaps = 56/419 (13%)
Query: 193 NFVAFLKVFEECCRI-ALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKV 243
N V + + CR A++E F K P+ + A + G C +S ++A+ +
Sbjct: 278 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRS-NEAKAL 336
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
++ MS ++PN + L + +G ++ ++ M G + Y +L+ G K
Sbjct: 337 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 396
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
+G ++ AS L L + TY +++G ++ + K L+ E +E +G
Sbjct: 397 MGQMDRAS----LLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSE---MENAG 449
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH------ 417
I + +I G +KA +L+EM G VY P + YC+E
Sbjct: 450 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 509
Query: 418 -----------------------------RTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
R E+T+ + GL + Y LI
Sbjct: 510 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 569
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ + D +SA L + M + + Y+ ++ ++ E +++ ++ D V +
Sbjct: 570 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML-DQGVMLD 628
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA---EQYFSVL 564
+ +IH +G +E A R L + P+ Y SLI+G E+ F +L
Sbjct: 629 NRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 687
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 113/559 (20%), Positives = 205/559 (36%), Gaps = 94/559 (16%)
Query: 28 PSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEA 87
P LY + IF L + ++ Q Q++ L N + +H L + + A
Sbjct: 522 PDLYCY-NSLIFGLSKVGRVEESTKYFAQMQERGLLP--NEFTYSGLIHGYLKNGDLESA 578
Query: 88 WKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHT 147
+ + + L P+ + L+ D + F S++ +LD +
Sbjct: 579 EQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML----DQGVMLDNRIYGI 634
Query: 148 LLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRI 207
L+ ++ ++ AF ++ + KN ++ + +C+ AF + +E +
Sbjct: 635 LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF-GILDEMSKK 693
Query: 208 ALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
+D PNI NA ++G C +S A V ++ G+ PN ++ L
Sbjct: 694 GVD-------PNIVCYNALIDGLCKS-GDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 745
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
G L + M G + YS L +G G+LE A I G+ S
Sbjct: 746 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS 805
Query: 328 FSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
F+ +V GF + G ++ L +I + L P+ + ++ IIS G
Sbjct: 806 FNN-----LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN-----IISGLSEAGKLS 855
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG-LQLDVGNYDAL 444
+ H+I E L+ E + L MD+ + G + LDV D +
Sbjct: 856 EVHTIFVE----------------LQQKTSESAARHFSSLFMDMINQGKIPLDV--VDDM 897
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLK-GSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
I + A + RD+ A+ + SYL I+ L
Sbjct: 898 IRDHCKEGNLDKAL-MLRDVIVAKSAPMGCSSYLAIVDNL-------------------- 936
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI-----NGYVTAE 558
C+ G+L +A L+ M P++ L L+ +GY+ +
Sbjct: 937 ----------------CRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYI--Q 978
Query: 559 QYFSVL--MMWHEIKRKIS 575
++ +VL M+ H+ +K S
Sbjct: 979 EHNTVLDNMLCHKWLQKDS 997
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 146/339 (43%), Gaps = 13/339 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+Y N + C+ L V A V+ + LG +P+ ++F L ++G +
Sbjct: 96 VPPNVYTLNILINSFCH-LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 154
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--Y 333
+ L M + GF +V Y +LI+G K+GN +A R + +MEQ + + Y
Sbjct: 155 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR------SMEQGNCQPDVVIY 208
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ ++ V NL ++ GI D ++ A NL ++L++
Sbjct: 209 TSIIDSLCKDRQVTEAFNLF---SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQ 265
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + ++ + A CKE + EA ++V + G++ DV Y L++ +
Sbjct: 266 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 325
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A +F M SY T++ G + H+ + +E+ + T +N
Sbjct: 326 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIP-DTKTYN 384
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++++ C GRL+DA M+ P+ TY L++
Sbjct: 385 TLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLD 423
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/327 (18%), Positives = 135/327 (41%), Gaps = 10/327 (3%)
Query: 249 VLGVRPNESSFGFLAYLYALKGLQE--KIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
+L + P S F L ++ ++ ++ L + M+ FG + + LI+ + L
Sbjct: 56 LLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNR 115
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
+ A + L G+ Q D T+ +++G G + +L K+ G
Sbjct: 116 VGFAFSVLAKILKLGH--QPD--PTTFTTLIRGLCVEGKIGEALHLF---DKMIDEGFQP 168
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+ +I+ +G + A +L M C + +Y + + CK+ + EA L
Sbjct: 169 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 228
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ G+ D+ Y +L+ A +++ +L M ++I + T++ L +
Sbjct: 229 SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKE 288
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ +D +++ VE + +++ C +++A + M+ F P+ +
Sbjct: 289 GKVTEAHEIVDMMIQRG-VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 347
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRK 573
Y +LINGY + + ++ E+ RK
Sbjct: 348 YTTLINGYCKIHKIDKAMYLFEEMCRK 374
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 125/287 (43%), Gaps = 16/287 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ + ++ C V++A ++++ M GV P+ ++ L + L+ ++ V+
Sbjct: 273 PDVVIFSTVVDALCKE-GKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 331
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCE 335
+ +M GF+ ++ Y++LI+GY K+ ++ A M + ++ +TY
Sbjct: 332 VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF------EEMCRKEWIPDTKTYNT 385
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII--SACVNLGLSDKAHSILDE 393
++ G G L + I ++ G + D V + I+ S C N L ++A ++L
Sbjct: 386 LMYGLCHVGR---LQDAIALFHEMVARGQMPD-LVTYSILLDSLCKNRHL-EEAMALLKA 440
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
+ A + + VY + C+ A L ++SS GL V Y+ +I
Sbjct: 441 IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 500
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
A LF +M +Y TI G ++N+ L+E++
Sbjct: 501 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEML 547
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 158/373 (42%), Gaps = 10/373 (2%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
EE R+ + + P+I+ NA + C + +A + + G++P+ +FG
Sbjct: 400 IEEARRLLDGMSCSGVAPDIFCYNAIIS-CLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 458
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
Y+ G + + M + G Y+ LI+G+ K GNL A
Sbjct: 459 AFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHAL 518
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
G + +T + G L+NG V+ + E L+ G+V D +IS
Sbjct: 519 GVLPDV----QTCSAFIHGLLKNGRVQEALKVFSE---LKEKGLVPDVFTYSSLISGFCK 571
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G +KA + DEM G + + +Y + CK A +L + GL+ D
Sbjct: 572 QGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 631
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y +I+ S++ AFSLF +M + Y ++ G + E E++
Sbjct: 632 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 691
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+ + T +N++I +CK+ ++++A + + MI Q P+ TY ++I+ + A +
Sbjct: 692 Q--KGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKM 749
Query: 561 FSVLMMWHEIKRK 573
+++ E++ +
Sbjct: 750 EEANLLFKEMQER 762
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 176/415 (42%), Gaps = 67/415 (16%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN Y G C + +++A+ E M G++P+ ++ L + +G ++++
Sbjct: 207 PNTYTYTIITAGLCRA-KRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLR 265
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLGGGNMEQSDFSKETYCE 335
++ +M G ++ Y+ LI G K G +E A+ + ++ LG + T+C
Sbjct: 266 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG------CKPNSRTFCL 319
Query: 336 VVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGI--ISACVNLGLSDKAHSIL 391
+++G+ + N+ L+ E +K L PS + S G I + C +L L++K +L
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAV----SYGAMINGLCHCKDLSLANK---LL 372
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++M G + VY + Y E R EA +L+ +S SG+ D+ Y+A+I
Sbjct: 373 EKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII------ 426
Query: 452 QDFQSAFSLFRDMREARIY--DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
S S M EA Y +++G L +P+ +
Sbjct: 427 ----SCLSKAGKMEEASTYLLEIQGRGL----------KPDAVT---------------- 456
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+ + I + K G++ +A + M+ PN+ Y LING+ A L ++
Sbjct: 457 --FGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRH 514
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ G+ + AF++ L+K G ++V + +E + D + Y
Sbjct: 515 LH-------ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 562
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 141/315 (44%), Gaps = 18/315 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ C+A + G V +A KV + G+ P+ ++ L + +G EK E
Sbjct: 522 PDVQTCSAFIHGLLKN-GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 580
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS-DFSKETYCEV 336
L M G + + Y++L+ G K G+++ A + L G E+ + TY +
Sbjct: 581 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK-----LFDGMPEKGLEPDSVTYSTM 635
Query: 337 VKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+ G+ ++ NV +L E ++ ++P V + ++ C G +KA ++ EM
Sbjct: 636 IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYN-----ALVHGCCKEGDMEKAMNLFREM 690
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + L + + YCK + EA+QL ++ + + D Y +I+ +
Sbjct: 691 LQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKM 749
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLME-NHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A LF++M+E + +Y ++M G + E+ A F V + + + T +
Sbjct: 750 EEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVT--YG 807
Query: 514 SIIHAFCKAGRLEDA 528
+I+A CK L +A
Sbjct: 808 LVIYAHCKEDNLVEA 822
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 199/493 (40%), Gaps = 62/493 (12%)
Query: 81 TNNTDEAWKSFKSLTANSLFPSKPVTNSLI-AHLSSLQDNHNLKRAFASVVYVIEKNPKL 139
T EA K F + + L P+ P+ LI H + NL A S+ + L
Sbjct: 467 TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA----GNLMEAL-SIFRHLHALGVL 521
Query: 140 LDFQT----VHTLLGSMRNANTAAPAFALVKCMFKNRYFMP-FELWGGFLVDICRKNSNF 194
D QT +H LL + R A F+ K + +P + + C++
Sbjct: 522 PDVQTCSAFIHGLLKNGR-VQEALKVFS----ELKEKGLVPDVFTYSSLISGFCKQGEVE 576
Query: 195 VAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
AF ++ +E C L + PNI+ NA ++G C + A K+ + M G+ P
Sbjct: 577 KAF-ELHDEMC-------LKGIAPNIFIYNALVDGLCKS-GDIQRARKLFDGMPEKGLEP 627
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESAS 311
+ ++ + Y E + E SL +E G Y++L+ G K G++E A
Sbjct: 628 DSVTYSTMIDGYCK---SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 684
Query: 312 RTILLCLGGGNMEQSDFSKE-TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
M Q F+ ++ ++ G+ ++ ++ + L Q++ I+ D
Sbjct: 685 NLFR------EMLQKGFATTLSFNTLIDGYCKSCKIQEASQLF---QEMIAKQIMPDHVT 735
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
+I G ++A+ + EM V Y + Y K +++E L +
Sbjct: 736 YTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMV 795
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRD-------MREARIYDLKGSYLTIMTGL 483
+ G++ D Y +I A + AF L RD + + I+DL ++T L
Sbjct: 796 AKGVKPDEVTYGLVIYAHCKEDNLVEAFKL-RDEVVGKGMLTKGTIHDL------LITAL 848
Query: 484 MENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
+ + LDE+ E P + ++++ +F +AG++++A R + L
Sbjct: 849 CKREDLTEASKLLDEMGELGLKPSLAA----CSTLVRSFHEAGKMDEATRVFEGVKSLGL 904
Query: 541 EPNDQTYLSLING 553
P+ T + L+NG
Sbjct: 905 VPDTTTLIDLVNG 917
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 117/284 (41%), Gaps = 23/284 (8%)
Query: 285 FGFSSQMVFYSSLISGYVKLGNLESASR------------TILLCLGGGNMEQSDFSKET 332
+G SS +VF LI Y ++G L+ A+ +++ C +M + T
Sbjct: 151 YGGSSPVVF-DILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNT 209
Query: 333 YC-EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
Y ++ L A L E +++ +G+ D + +I + G D+ I
Sbjct: 210 YTYTIITAGLCRAKRMNEAKLTFE--EMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 267
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
D M +CG + L Y + CK + +A +++ + + G + + + LIE
Sbjct: 268 DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCRE 327
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV---EDPRVEVK 508
+ A L +M + + SY ++ GL L L+++ P V V
Sbjct: 328 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV- 386
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++++I + GR+E+A+R L M P+ Y ++I+
Sbjct: 387 ---YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 427
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 80/219 (36%), Gaps = 45/219 (20%)
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC--SVGLGVYVPTLKAY-------C 414
I++D G++ N+ K SIL + C S+G VP Y C
Sbjct: 161 ILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLC 220
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+ R EA ++ +GL+ D ALI+ + D RI D
Sbjct: 221 RAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVL---------RIKD--- 268
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
V+ + + +N +IH CK G++E A L+
Sbjct: 269 ------------------------VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKG 304
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
MI L +PN +T+ LI GY L + E++++
Sbjct: 305 MITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR 343
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 153/426 (35%), Gaps = 58/426 (13%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLS---------SLQDNHNLKRA 125
+H L EA K F L L P +SLI+ L D LK
Sbjct: 531 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK-G 589
Query: 126 FASVVYV-------------IEKNPKLLDFQ----------TVHTLLGSMRNANTAAPAF 162
A +++ I++ KL D T T++ + A AF
Sbjct: 590 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 649
Query: 163 ALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYA 222
+L M ++ P LV C K + + +F E + L F
Sbjct: 650 SLFHEM-PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF------- 701
Query: 223 CNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLM 282
N ++G C + + +A ++ + M + P+ ++ + + G E+ L M
Sbjct: 702 -NTLIDGYCKSCK-IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 759
Query: 283 NEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQ 342
E V Y+SL+ GY KLG S + + + TY V+ +
Sbjct: 760 QERNLIVDTVTYTSLMYGYNKLGQ----SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCK 815
Query: 343 NGNVKGLANLIIEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
N ++EA KL G++ ++ +I+A +A +LDEM G
Sbjct: 816 EDN-------LVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 868
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
L ++++ + + EAT++ + S GL D L+ ++ D + A
Sbjct: 869 LKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDAR 928
Query: 459 SLFRDM 464
+L + +
Sbjct: 929 NLIKQL 934
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 152/356 (42%), Gaps = 10/356 (2%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I+ NA + C + +A + + G++P+ +FG Y+ G + +
Sbjct: 506 PDIFCYNAIIS-CLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 564
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M + G Y+ LI+G+ K GNL A G + +T +
Sbjct: 565 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDV----QTCSAFI 620
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G L+NG V+ + E L+ G+V D +IS G +KA + DEM
Sbjct: 621 HGLLKNGRVQEALKVFSE---LKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK 677
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + + +Y + CK A +L + GL+ D Y +I+ S++ A
Sbjct: 678 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 737
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
FSLF +M + Y ++ G + E E+++ + T +N++I
Sbjct: 738 FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ--KGFATTLSFNTLID 795
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+CK+ ++++A + + MI Q P+ TY ++I+ + A + +++ E++ +
Sbjct: 796 GYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER 851
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 191/451 (42%), Gaps = 76/451 (16%)
Query: 191 NSNFVAFLKVFEECCRIA-LDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAE 241
N N + V E C++ +DE ++ + PN Y G C + +++A+
Sbjct: 260 NPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRA-KRMNEAK 318
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
E M G++P+ ++ L + +G ++++ ++ +M G ++ Y+ LI G
Sbjct: 319 LTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGL 378
Query: 302 VKLGNLESASRTI--LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK- 358
K G +E A+ + ++ LG + T+C +++G+ + N+ L+ E +K
Sbjct: 379 CKFGKMEKAAEILKGMVTLG------CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR 432
Query: 359 -LEPSGIVVDRSVGFGI--ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
L PS + S G I + C +L L++K +L++M G + VY + AY
Sbjct: 433 NLVPSAV----SYGAMINGLCHCKDLSLANK---LLEKMTFSGLKPNVVVYSILIMAYAS 485
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY--DLK 473
E R EA +L+ +S SG+ D+ Y+A+I S S M EA Y +++
Sbjct: 486 EGRIEEARRLLDGMSCSGVAPDIFCYNAII----------SCLSKAGKMEEASTYLLEIQ 535
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
G L +P+ + + + I + K G++ +A +
Sbjct: 536 GRGL----------KPDAVT------------------FGAFILGYSKTGKMTEAAKYFD 567
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
M+ PN+ Y LING+ A L ++ + G+ + AF+
Sbjct: 568 EMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLH-------ALGVLPDVQTCSAFI 620
Query: 594 YALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ L+K G ++V + +E + D + Y
Sbjct: 621 HGLLKNGRVQEALKVFSELKEKGLVPDVFTY 651
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 122/552 (22%), Positives = 223/552 (40%), Gaps = 62/552 (11%)
Query: 19 SSSSTSPETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKS 78
S S +P+ F +I S K+ + + ++ + Q + L D +T L S
Sbjct: 500 SCSGVAPDI-----FCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYS 554
Query: 79 LLTNNTDEAWKSFKSLTANSLFPSKPVTNSLI-AHLSSLQDNHNLKRAFASVVYVIEKNP 137
T EA K F + + L P+ P+ LI H + NL A S+ +
Sbjct: 555 K-TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA----GNLMEAL-SIFRRLHALG 608
Query: 138 KLLDFQT----VHTLLGSMRNANTAAPAFALVKCMFKNRYFMP-FELWGGFLVDICRKNS 192
L D QT +H LL + R A F+ K + +P + + C++
Sbjct: 609 VLPDVQTCSAFIHGLLKNGR-VQEALKVFS----ELKEKGLVPDVFTYSSLISGFCKQGE 663
Query: 193 NFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
AF ++ +E C L + PNI+ NA ++G C + A K+ + M G+
Sbjct: 664 VEKAF-ELHDEMC-------LKGIAPNIFIYNALVDGLCKS-GDIQRARKLFDGMPEKGL 714
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLES 309
P+ ++ + Y E + E SL +E G Y++L+ G K G++E
Sbjct: 715 EPDSVTYSTMIDGYCK---SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 771
Query: 310 ASRTILLCLGGGNMEQSDFSKE-TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR 368
A M Q F+ ++ ++ G+ ++ ++ + L Q++ I+ D
Sbjct: 772 AMNLFR------EMLQKGFATTLSFNTLIDGYCKSCKIQEASQLF---QEMIAKQIMPDH 822
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+I G ++A+ + EM V Y + Y K +++E L
Sbjct: 823 VTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEK 882
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD-------MREARIYDLKGSYLTIMT 481
+ + G++ D Y +I A + AF L RD + + I+DL ++T
Sbjct: 883 MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL-RDEVVGKGMLTKGTIHDL------LIT 935
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
L + + LDE+ E ++ N+++ +F +AG++++A R + L
Sbjct: 936 ALCKREDLTEASKLLDEMGE-LGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLV 994
Query: 542 PNDQTYLSLING 553
P+ T + L+NG
Sbjct: 995 PDTTTLIDLVNG 1006
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 9/216 (4%)
Query: 365 VVDRSVGFGI------ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
++D +GF + + A G A +L EM+ G + +Y ++ C+
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
EA +L + GL + Y + ++ A F +M++ + +
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338
Query: 479 IMTGLM-ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++ G M E E++ + +V+ + + +N +IH CK G++E A L+ M+
Sbjct: 339 LIDGFMREGDIDEVLR--IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT 396
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
L +PN +T+ LI GY L + E++++
Sbjct: 397 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR 432
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 153/426 (35%), Gaps = 58/426 (13%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLS---------SLQDNHNLKRA 125
+H L EA K F L L P +SLI+ L D LK
Sbjct: 620 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK-G 678
Query: 126 FASVVYV-------------IEKNPKLLDFQ----------TVHTLLGSMRNANTAAPAF 162
A +++ I++ KL D T T++ + A AF
Sbjct: 679 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 738
Query: 163 ALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYA 222
+L M ++ P LV C K + + +F E + L F
Sbjct: 739 SLFHEM-PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF------- 790
Query: 223 CNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLM 282
N ++G C + + +A ++ + M + P+ ++ + + G E+ L M
Sbjct: 791 -NTLIDGYCKSCK-IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 848
Query: 283 NEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQ 342
E V Y+SL+ GY KLG S + + + TY V+ +
Sbjct: 849 QERNLIVDTVTYTSLMYGYNKLGQ----SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCK 904
Query: 343 NGNVKGLANLIIEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
N ++EA KL G++ ++ +I+A +A +LDEM G
Sbjct: 905 EDN-------LVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 957
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
L ++++ + + EAT++ + S GL D L+ ++ D + A
Sbjct: 958 LKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDAR 1017
Query: 459 SLFRDM 464
+L + +
Sbjct: 1018 NLIKQL 1023
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 145/354 (40%), Gaps = 44/354 (12%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ AC A + GCC V++A +V + M LGV PNE ++ L + Y ++G +E L
Sbjct: 37 DVAACTALVHGCCQS-GDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFAL 95
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M G + Y+ L+ + + G +SA L ++ + +Y ++
Sbjct: 96 VGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSAR----LLFDEMPLKGVVRNVVSYNILIA 151
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
G ++G +K A L EA + E GI + V L
Sbjct: 152 GLCRHGKLKDAAQL-FEAMRRE------------GIHPSMVTFNL--------------- 183
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ Y K + + A + ++GLQ V Y+ LI ++D A
Sbjct: 184 ----------LIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAI 233
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
F DM+E R+ K +Y ++ + + + L E +E +EV + ++HA
Sbjct: 234 RAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSE-MEKAGLEVDVQSYGVLLHA 292
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
C G++ A++ + M +PN+ Y +I GY + L + E+++
Sbjct: 293 LCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRK 346
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 116/267 (43%), Gaps = 17/267 (6%)
Query: 206 RIALDE-NLDFMKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
R+ DE L + N+ + N + G C +G + DA ++ E M G+ P+ +F L
Sbjct: 128 RLLFDEMPLKGVVRNVVSYNILIAGLCRHG--KLKDAAQLFEAMRREGIHPSMVTFNLLI 185
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
Y G + + M G +V Y+ LI G+ + ++ A R +M
Sbjct: 186 DGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAF------SDM 239
Query: 324 EQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD-RSVGFGIISACVN 380
++ +K TY ++ F + + ++ E +E +G+ VD +S G + + C+
Sbjct: 240 KERRLAPTKVTYTILIGAFAKENEMDRAFEMLSE---MEKAGLEVDVQSYGVLLHALCME 296
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G A + M++ G +Y + Y +E + +A +L+M++ SGL +V +
Sbjct: 297 -GKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVAS 355
Query: 441 YDALIEASITSQDFQSAFSLFRDMREA 467
Y I Q A +L DM +A
Sbjct: 356 YCLTIRLLCNEGKCQEAEALIGDMEDA 382
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 150/339 (44%), Gaps = 13/339 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ + G C L + A K++ M+ G+ N ++ + L +G V
Sbjct: 283 PDVVTYGIMVHGYC-TLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVR 341
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M G +++++SG+ + G+L +A M++ + + TY
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF------DEMQKRGLAADGVTYTA 395
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + G +K ++ Q++E G+ VD +I +G +A + ++M
Sbjct: 396 LINGLCRAGELKEAERVL---QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ + Y CK+ A +L+ ++ S GL+L++ Y++LI + + +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A DM EA + +Y TI+ L ++ + + L E++ D ++ +N +
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML-DKGIKPTIVTYNVL 571
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++ FC +GR+E KR L M+ PN TY SL+ Y
Sbjct: 572 MNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQY 610
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 168/393 (42%), Gaps = 25/393 (6%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
VSDA +V+E M + GV + + F + + KG M + G ++ V Y++
Sbjct: 336 VSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTA 395
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQS--DFSKETYCEVVKGFLQNGNVKG---LAN 351
LI+G + G L+ A R + ME D TY ++ G+ + G + + N
Sbjct: 396 LINGLCRAGELKEAERVL------QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN 449
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++ QK +V ++ G+ G A+ +L EM + G + + Y +
Sbjct: 450 KMV--QKRVTPNVVTYTALSDGLCKQ----GDVCAANELLHEMCSKGLELNIFTYNSLIN 503
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
CK +A + ++D+ +GL+ DV Y +I A S++ A SL ++M + I
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
+Y +M G + R E L+ ++E + T +NS++ +C ++
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK-NIHPNTTTYNSLMKQYCIEKNMKSTTEI 622
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDA 591
+ M+ + PN+ TY LI G+ A L E+ +KG + + +A
Sbjct: 623 YKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMI-------EKGFRLTASSYNA 675
Query: 592 FLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ L K F ++ EK ++ ++ + Y
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVY 708
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 68/364 (18%), Positives = 128/364 (35%), Gaps = 84/364 (23%)
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+I + L +E +V Y ++ GY L LE+A
Sbjct: 268 RIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETA----------------------- 304
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+K L+ + +L P +I+ + G A ++++
Sbjct: 305 ------------IKLLSEMAARGLELNPVAYT-------SVIALLCDEGQVSDAVRVVED 345
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTA--------------------------------- 420
M G + V+ + +C++ A
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 421 --EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
EA +++ ++ GL +D Y LI+ AF + M + R+ +Y
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTA 465
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+ GL + L E+ +E+ +NS+I+ CKAG LE A RT+ M
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSK-GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN-LVDAF-LYAL 596
+P+ TY ++I +++ L H + +++ G K +N L++ F +
Sbjct: 525 GLKPDVYTYTTIIGALCQSKE----LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 580
Query: 597 VKGG 600
V+GG
Sbjct: 581 VEGG 584
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 149/350 (42%), Gaps = 41/350 (11%)
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
SFG + G EK +L + EFGFS +V Y++LI G K G +E A + +
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKA-KDLFFE 223
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
+G + +++ TY ++ G +NG K + +K++ G+ + +++
Sbjct: 224 MGKFGLVANEW---TYTVLIHGLFKNGIKKQGFEMY---EKMQEDGVFPNLYTYNCVMNQ 277
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
G + A + DEM G S + Y + C+E + EA +++ + S G+ +
Sbjct: 278 HCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPN 337
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-------------- 483
+ Y+ LI+ A SL RD++ + +Y +++G
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397
Query: 484 -MENH--RPE------LMAAF-----------LDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
ME +P L+ F L +E+ + H ++ +IH FC G
Sbjct: 398 EMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKG 457
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++ +A R + M+ + EPN Y +++ GY + L ++ E++ K
Sbjct: 458 QMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEK 507
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 154/368 (41%), Gaps = 24/368 (6%)
Query: 196 AFLKVFEECCRIA-LDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKVIET 246
+F V + CC ++++ D + PN+ ++GCC + A+ +
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC-KRGEIEKAKDLFFE 223
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
M G+ NE ++ L + G++++ E+ M E G + Y+ +++ + K G
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGR 283
Query: 307 LESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
+ A + M + S TY ++ G + AN +++ +++ GI
Sbjct: 284 TKDAFKLF------DEMRERGVSCNIVTYNTLIGGLCREMKANE-ANKVMD--QMKSDGI 334
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ +I +G KA S+ ++ + G S L Y + +CK+ T+ A +
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL- 483
+V ++ G++ Y LI+ + + A L M E + +Y ++ G
Sbjct: 395 VVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFC 454
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
++ E A+ L +++ ++E +N+++ +CK G A R R M + PN
Sbjct: 455 IKGQMNE--ASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPN 512
Query: 544 DQTYLSLI 551
+Y +I
Sbjct: 513 VASYRYMI 520
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 13/265 (4%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
NI N + G C +++ ++A KV++ M G+ PN ++ L + G K + L
Sbjct: 302 NIVTYNTLIGGLCREMKA-NEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL 360
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEV 336
+ G S +V Y+ L+SG+ K G+ A + + ME+ SK TY +
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVV------KEMEERGIKPSKITYTIL 414
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ F + N++ L +E G+ D +I G ++A + M A
Sbjct: 415 IDTFARMDNMEKAIQL---RSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVA 471
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
+Y + YCKE + A +L ++ L +V +Y +IE + +
Sbjct: 472 KKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKE 531
Query: 457 AFSLFRDMREARIYDLKGSYLTIMT 481
A L M + I D S L +++
Sbjct: 532 AEGLVEKMIDTGI-DPSDSILNLIS 555
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 127/300 (42%), Gaps = 25/300 (8%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-- 271
D + PN+Y N + C ++ DA K+ + M GV N + Y + GL
Sbjct: 262 DGVFPNLYTYNCVMNQHCKDGRT-KDAFKLFDEMRERGVSCN-----IVTYNTLIGGLCR 315
Query: 272 QEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
+ K E +M++ G + ++ Y++LI G+ +G L + + LC +++
Sbjct: 316 EMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKL---GKALSLCR---DLKSRGL 369
Query: 329 SKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
S TY +V GF + G+ G ++ E +E GI + +I + +K
Sbjct: 370 SPSLVTYNILVSGFCKKGDTSGAGKVVKE---MEERGIKPSKITYTILIDTFARMDNMEK 426
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + M G + + Y + +C + + EA++L + + L+ + Y+ ++
Sbjct: 427 AIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVL 486
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DP 503
A LFR+M E + SY ++ L + + + ++++++ DP
Sbjct: 487 GYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDP 546
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 123/312 (39%), Gaps = 17/312 (5%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
E M GV PN ++ + + G + +L M E G S +V Y++LI G +
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI--IEAQKLE 360
A++ + M+ + TY ++ GF G + +L ++++ L
Sbjct: 317 MKANEANKVM------DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
PS + + ++S G + A ++ EM G Y + + +
Sbjct: 371 PSLVTYNI-----LVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNME 425
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
+A QL + GL DV Y LI A LF+ M ++ K Y T++
Sbjct: 426 KAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMV 485
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
G + E+ E+ + + +I CK + ++A+ + +MI
Sbjct: 486 LGYCKEGSSYRALRLFREM-EEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGI 544
Query: 541 EPNDQTYLSLIN 552
+P+D + L+LI+
Sbjct: 545 DPSD-SILNLIS 555
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 10/194 (5%)
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y+ +I A + SQ S+ S F +M + + ++T ++ + F +E
Sbjct: 97 YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-- 154
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+V++ + + +I C+AG +E + L + F PN Y +LI+G +
Sbjct: 155 SKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEI 214
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
++ E+ G+ G+ ++ L K G ++ EK QE VF +
Sbjct: 215 EKAKDLFFEM-------GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPN 267
Query: 621 KWKYKQAFMENHKK 634
+ Y M H K
Sbjct: 268 LYTY-NCVMNQHCK 280
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 150/339 (44%), Gaps = 13/339 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ + G C L + A K++ M+ G+ N ++ + L +G V
Sbjct: 283 PDVVTYGIMVHGYC-TLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVR 341
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M G +++++SG+ + G+L +A M++ + + TY
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF------DEMQKRGLAADGVTYTA 395
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + G +K ++ Q++E G+ VD +I +G +A + ++M
Sbjct: 396 LINGLCRAGELKEAERVL---QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ + Y CK+ A +L+ ++ S GL+L++ Y++LI + + +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A DM EA + +Y TI+ L ++ + + L E++ D ++ +N +
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML-DKGIKPTIVTYNVL 571
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++ FC +GR+E KR L M+ PN TY SL+ Y
Sbjct: 572 MNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQY 610
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 168/393 (42%), Gaps = 25/393 (6%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
VSDA +V+E M + GV + + F + + KG M + G ++ V Y++
Sbjct: 336 VSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTA 395
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQS--DFSKETYCEVVKGFLQNGNVKG---LAN 351
LI+G + G L+ A R + ME D TY ++ G+ + G + + N
Sbjct: 396 LINGLCRAGELKEAERVL------QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN 449
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++ QK +V ++ G+ G A+ +L EM + G + + Y +
Sbjct: 450 KMV--QKRVTPNVVTYTALSDGLCKQ----GDVCAANELLHEMCSKGLELNIFTYNSLIN 503
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
CK +A + ++D+ +GL+ DV Y +I A S++ A SL ++M + I
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
+Y +M G + R E L+ ++E + T +NS++ +C ++
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK-NIHPNTTTYNSLMKQYCIEKNMKSTTEI 622
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDA 591
+ M+ + PN+ TY LI G+ A L E+ +KG + + +A
Sbjct: 623 YKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMI-------EKGFRLTASSYNA 675
Query: 592 FLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ L K F ++ EK ++ ++ + Y
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 68/364 (18%), Positives = 128/364 (35%), Gaps = 84/364 (23%)
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+I + L +E +V Y ++ GY L LE+A
Sbjct: 268 RIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETA----------------------- 304
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+K L+ + +L P +I+ + G A ++++
Sbjct: 305 ------------IKLLSEMAARGLELNPVAYT-------SVIALLCDEGQVSDAVRVVED 345
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTA--------------------------------- 420
M G + V+ + +C++ A
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 421 --EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
EA +++ ++ GL +D Y LI+ AF + M + R+ +Y
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTA 465
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+ GL + L E+ +E+ +NS+I+ CKAG LE A RT+ M
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSK-GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN-LVDAF-LYAL 596
+P+ TY ++I +++ L H + +++ G K +N L++ F +
Sbjct: 525 GLKPDVYTYTTIIGALCQSKE----LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 580
Query: 597 VKGG 600
V+GG
Sbjct: 581 VEGG 584
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 166/425 (39%), Gaps = 69/425 (16%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ AC A + GCC G V++A +V + M +LG+ PNE ++ L + Y G +EK L
Sbjct: 37 DVTACTALVNGCCKG-GDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFAL 95
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M G + Y+ LI + + G E A +
Sbjct: 96 FEEMRRGGVEPNLYTYNCLIGEWCRTGEFERA---------------------------R 128
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
V+G+ ++ L I C + L D A +LD M G
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTL--------------IAGLCRHGKLWDAA-KLLDMMRTEG 173
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ + + Y K + + A + ++G Q Y+ LI ++D A
Sbjct: 174 TRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRAN 233
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLM-ENHRP---ELMAAFLDEVVEDPRVEVKTHDWNS 514
DM+E + K +Y ++ ENH E++A +E +EV H +
Sbjct: 234 RALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAG-----MEKAGLEVDAHTYGV 288
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
++ A C G ++DA++ + M EP++ Y +I GY + L + E++
Sbjct: 289 LVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMR--- 345
Query: 575 STDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKK 634
QKG+ + ++ Y L V+ +K QE + +D + ++F +H+
Sbjct: 346 ----QKGL-----IPNSASYGLTI-----RVLCKDDKCQEAEALLDDMETIRSFAGHHQN 391
Query: 635 LKVAK 639
+K
Sbjct: 392 FIASK 396
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 166/425 (39%), Gaps = 69/425 (16%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ AC A + GCC G V++A +V + M +LG+ PNE ++ L + Y G +EK L
Sbjct: 37 DVTACTALVNGCCKG-GDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFAL 95
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M G + Y+ LI + + G E A +
Sbjct: 96 FEEMRRGGVEPNLYTYNCLIGEWCRTGEFERA---------------------------R 128
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
V+G+ ++ L I C + L D A +LD M G
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTL--------------IAGLCRHGKLWDAA-KLLDMMRTEG 173
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ + + Y K + + A + ++G Q Y+ LI ++D A
Sbjct: 174 TRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRAN 233
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLM-ENHRP---ELMAAFLDEVVEDPRVEVKTHDWNS 514
DM+E + K +Y ++ ENH E++A +E +EV H +
Sbjct: 234 RALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAG-----MEKAGLEVDAHTYGV 288
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
++ A C G ++DA++ + M EP++ Y +I GY + L + E++
Sbjct: 289 LVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMR--- 345
Query: 575 STDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKK 634
QKG+ + ++ Y L V+ +K QE + +D + ++F +H+
Sbjct: 346 ----QKGL-----IPNSASYGLTI-----RVLCKDDKCQEAEALLDDMETIRSFAGHHQN 391
Query: 635 LKVAK 639
+K
Sbjct: 392 FIASK 396
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 161/374 (43%), Gaps = 21/374 (5%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+P+ S++G L ++ G + ++E+ + M FS ++ +++++ Y ++G+L+ A
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSV 370
G M S + TYC ++ G Q + L+ E + P D +V
Sbjct: 81 HFR-----GKMWCSP-TAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHP-----DAAV 129
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
+I+ +G D A ++L M C + Y + C+ + EA +L+ +
Sbjct: 130 YNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMK 189
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
SGL D Y+AL+ + L +M EA SY T++ L E+ + E
Sbjct: 190 ESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYE 249
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
L++++E + +NS++ FCK ++++A+R L M+ + P TY +L
Sbjct: 250 EAGKILEKMIEK-KCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTL 308
Query: 551 INGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
I G+ A++ + ++ + GI + + L L K G + +++E
Sbjct: 309 IGGFSRADRLADAYRVMEDMFK-------AGISPDLVTYNCLLDGLCKAGKLEEAHELLE 361
Query: 611 KSQEMKVFVDKWKY 624
E D Y
Sbjct: 362 VMVEKDCAPDVVTY 375
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 152/348 (43%), Gaps = 37/348 (10%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ--EKI 275
P++ N+ ++G C + + +AE+++E M P + Y + G +++
Sbjct: 265 PDVVTYNSLMDGFCK-VSKMDEAERLLEDMVGRRCAPT-----VITYTTLIGGFSRADRL 318
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
+ +M + G S +V Y+ L+ G K G LE A + + M + D + +
Sbjct: 319 ADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEV------MVEKDCAPDV 372
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIE---AQKLEPSGIVVDRSV-GFGIISACVNLGLSDK 386
TY +V G + G V A L++E + +P+ + + + GF G D+
Sbjct: 373 VTYSILVNGLCKLGKVDD-ARLLLEMMLERGCQPNLVTFNTMIDGF------CKAGKVDE 425
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
H +L+ M C+ + Y + YCK +R +A ++ G+ D +Y +++E
Sbjct: 426 GHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLE 479
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
++ + A + M + Y I+ GL + R + L +V+ + E
Sbjct: 480 GLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKML-QVMSERGCE 538
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ ++ +I+ CK R+EDA L M+ P+ TY SLI+G+
Sbjct: 539 PNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGF 586
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 181/476 (38%), Gaps = 70/476 (14%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
+EA K + + P NSL+ + +R +V P ++ T
Sbjct: 249 EEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGR-RCAPTVI---T 304
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
TL+G A+ A A+ +++ MFK + L +C+ L+ E
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGK-----LEEAHEL 359
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
+ ++++ P++ + + G C L V DA ++E M G +PN +F +
Sbjct: 360 LEVMVEKDC---APDVVTYSILVNGLCK-LGKVDDARLLLEMMLERGCQPNLVTFNTMID 415
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
+ G ++ ++ LM E + +V YS+LI GY K ++ A + +
Sbjct: 416 GFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGI-------- 467
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK----LEPSGIVVDRSVGFGIISACVN 380
K +Y +++G G V+ EAQ+ + G S II +
Sbjct: 468 --SPDKASYSSMLEGLCSTGKVE-------EAQEVMDLMTKQGCPPTSSHYALIIGGLCD 518
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
+ D+A +L M+ GC L Y + CK R +A ++ + G DV
Sbjct: 519 VERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVAT 578
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y +LI+ +A+ F+ MR++ P+ +A
Sbjct: 579 YTSLIDGFCKINKMDAAYQCFKTMRDS------------------GCEPDKLA------- 613
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+N +I FC++G +E A ++ M+ P+ TY SL+ T
Sbjct: 614 -----------YNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTT 658
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 156/354 (44%), Gaps = 20/354 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ N + G C + + A V++ M P+ ++ L ++ +
Sbjct: 125 PDAAVYNCLIAGLCK-MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M E G + V Y++L++G K LE S+ + + G E FS T VV
Sbjct: 184 LMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGR-EPDTFSYNT---VV 239
Query: 338 KGFLQNGNVKGLANLI---IEAQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSILDE 393
++G + ++ IE +K P + + + GF +S D+A +L++
Sbjct: 240 ACLCESGKYEEAGKILEKMIE-KKCGPDVVTYNSLMDGFCKVSK------MDEAERLLED 292
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M C+ + Y + + + R A+A +++ D+ +G+ D+ Y+ L++ +
Sbjct: 293 MVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGK 352
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A L M E +Y ++ GL + + + A L E++ + + +N
Sbjct: 353 LEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVD-DARLLLEMMLERGCQPNLVTFN 411
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA---EQYFSVL 564
++I FCKAG++++ + L M + P+ TY +LI+GY A + F++L
Sbjct: 412 TMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL 465
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 143/339 (42%), Gaps = 13/339 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+Y N + C V DA+ + + + G++P SF L Y G E+
Sbjct: 230 PNVYTFNVLMNRLCKE-GKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFR 288
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSKETYCEV 336
L+ +M EF + YS+LI G K LE A+ +C G + +D T+ +
Sbjct: 289 LKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRG--LVPNDV---TFTTL 343
Query: 337 VKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ G +NG V +L +E Q++ G+ D + +I G +A + EM
Sbjct: 344 INGQCKNGRV----DLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMT 399
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G Y L CKE A ++ ++ G+QLD + A+I
Sbjct: 400 KRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIV 459
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A R+M A + G+Y +M G + ++ L E+ D + +N +
Sbjct: 460 DAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIP-GVITYNVL 518
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++ CK G++++A L M+ L P+D TY L+ G+
Sbjct: 519 MNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGH 557
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 135/334 (40%), Gaps = 57/334 (17%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNL 307
G PN +F L +G K+ + + + +E G V +++LI+GY K GNL
Sbjct: 227 GYPPNVYTFNVLMNRLCKEG---KVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNL 283
Query: 308 ESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV 365
E R ++ ME+ + TY ++ G + ++ +L E + G+V
Sbjct: 284 EEGFRLKMV------MEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKE---MCDRGLV 334
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+ +I+ G D A I +M G L +Y + CK EA +
Sbjct: 335 PNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKF 394
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
V +++ GL D Y L++ S D + A + ++M + I
Sbjct: 395 VGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQ--------------- 439
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
LD V + +II C+ G++ DA+RTLR M+ +P+D
Sbjct: 440 ----------LDNVA-----------FTAIISGLCRDGKIVDAERTLREMLRAGLKPDDG 478
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQ 579
TY +++G+ + M ++ +++ +DG
Sbjct: 479 TYTMVMDGFCKKGD----VKMGFKLLKEMQSDGH 508
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 164/400 (41%), Gaps = 44/400 (11%)
Query: 234 LQSVSDAEKVIET----MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
L ++S+A K IET +S+ + P+ + F++ L + +SL++ F F S
Sbjct: 46 LTTISEAIKNIETKPLHISLKNILPSFKAHHFIS----LVNQNPYFLPPKSLLSFFDFLS 101
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
+S + Y + + A R M Q S + KG G+ +
Sbjct: 102 SYPTFSHTVQSYCSMVHFLIAHR----------MNQQAESLLHFVVSRKG---KGSASSV 148
Query: 350 ANLIIEAQKLEPSGIVVDRSVG----FGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
I+E + S V D + FG +S + K H++ N C C
Sbjct: 149 FASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKC------ 202
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
L+ K A + ++I SG +V ++ L+ + A +F ++R
Sbjct: 203 ---LLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIR 259
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
+ + S+ T++ G ++ E F L V+E+ RV ++++I CK +
Sbjct: 260 KTGLQPTAVSFNTLINGYCKSGNLE--EGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQ 317
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF 584
LEDA + M PND T+ +LING + L EI +++ T KG+K
Sbjct: 318 LEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLAL----EIYQQMFT---KGLKA 370
Query: 585 EHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ L + + L KGG+F + V + + + DK+ Y
Sbjct: 371 DLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTY 410
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 175/404 (43%), Gaps = 17/404 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++A N ++G ++ A +V + M G +P+ S+ L + A G ++ ++
Sbjct: 43 PDVFAFNGVMQGFARS-NNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLK 101
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ S M G + M YSSL+ K ++ AS + GG+ + + E++
Sbjct: 102 ILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPD----RLMFYELI 157
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G Q G VK + +++ G + V ++ + G ++A+++ EM +
Sbjct: 158 LGLCQAGKVKDASERF---KQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSH 214
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
CS + Y L A CK R E +L + ++G +V + LI + + + A
Sbjct: 215 SCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKA 274
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+F M EA K +Y T+++GL + + A L E + + +NS+I
Sbjct: 275 LEVFGSMLEAGCKPNKYTYTTLISGLCRAEKV-IQARELFEKMTQACIPPDAVAYNSLIA 333
Query: 518 AFCKAGRLEDAKRTLRRMI-FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+CK G +++A++ R M +P T+ +LI+G F L ++
Sbjct: 334 GYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDG-------FCKLGKLGRANELVAE 386
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
G KG+ + + L + D ++V ++ +E K +D
Sbjct: 387 MGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLD 430
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/198 (18%), Positives = 88/198 (44%), Gaps = 1/198 (0%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
II + V ++++ +L+EM A GC+ + + ++ + + + +A ++ + SG
Sbjct: 16 IIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESG 75
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ D +Y LI + + +M +Y +++ L + R + +
Sbjct: 76 YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHAS 135
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ DE++ + + I+ C+AG+++DA ++M +PN Y L++G
Sbjct: 136 SLFDEMIRGGHHPDRLMFYELIL-GLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHG 194
Query: 554 YVTAEQYFSVLMMWHEIK 571
++ Q ++ E+K
Sbjct: 195 LCSSGQLEQANTLFAEMK 212
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 155/377 (41%), Gaps = 49/377 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN Y N + C +++DA + TM G+ P+ ++ L + KG+ +
Sbjct: 200 LHPNHYTFNLLVHTHCSK-GTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEA 258
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
L + M + G + Y++L+S Y +LG ++ A++ + M + F + TY
Sbjct: 259 RALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVV------EAMTANGFEPDLWTY 312
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS-ACVNLGLSDKAHSILD 392
+ G Q G V L E ++L G ++ V + ++ AC S A +L+
Sbjct: 313 NVLAAGLCQAGKVDEAFRLKDEMERL---GTLLPDVVTYNTLADACFKCRCSSDALRLLE 369
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM G L + +K CK+ A + ++ GL DV Y+ LI A +
Sbjct: 370 EMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAG 429
Query: 453 DFQSAFSLFRDM--------------------REARIYDLKG---------------SYL 477
+ A++L +M +E R + +G SY
Sbjct: 430 NIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYG 489
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
T+M + + E DE++E ++ +N++I + GRL++A L ++
Sbjct: 490 TVMAAYFKEYNSEPALRLWDEMIEK-KLTPSISTYNTLIKGLSRMGRLKEAIDKLNELME 548
Query: 538 LQFEPNDQTYLSLINGY 554
P+D TY +I+ Y
Sbjct: 549 KGLVPDDTTYNIIIHAY 565
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 198/496 (39%), Gaps = 66/496 (13%)
Query: 100 FPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAA 159
PS P+ ++ ++ S L+ H + S+ + P L Q + +L ++ + + +
Sbjct: 128 LPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSL---QAANAVLSALARSPSTS 184
Query: 160 PAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAF-LKVFEECCRIALDENLDFMK- 217
P +L F++ + R + N F L V C + L + L +
Sbjct: 185 PQASLDA--FRS-------------IVALRLHPNHYTFNLLVHTHCSKGTLADALSTLST 229
Query: 218 -------PNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALK 269
P+ N L C G+ + +A ++ M GV P ++ L YA
Sbjct: 230 MQGFGLSPDAVTYNTLLNAHCRKGM--LGEARALLARMKKDGVAPTRPTYNTLVSAYARL 287
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR---------TILLCLGG 320
G ++ ++ M GF + Y+ L +G + G ++ A R T+L +
Sbjct: 288 GWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVT 347
Query: 321 GN---------------------MEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
N M + T+ V+KG ++G ++G +
Sbjct: 348 YNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCL---N 404
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
K+ G+ D +I A G KA++++DEM G + L CKE
Sbjct: 405 KMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEK 464
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
R EA L+ G D +Y ++ A + + A L+ +M E ++ +Y
Sbjct: 465 RYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYN 524
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
T++ GL R + L+E++E V T +N IIHA+CK G LE+A + +M+
Sbjct: 525 TLIKGLSRMGRLKEAIDKLNELMEKGLVPDDT-TYNIIIHAYCKEGDLENAFQFHNKMVE 583
Query: 538 LQFEPNDQTYLSLING 553
F+P+ T +L+NG
Sbjct: 584 NSFKPDVVTCNTLMNG 599
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 150/350 (42%), Gaps = 15/350 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+K + + N L C + +A+ ++++ G P+E S+G + Y + E
Sbjct: 446 LKLDTFTLNTVLYNLCKE-KRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPA 504
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L M E + + Y++LI G ++G L+ A + + G + TY
Sbjct: 505 LRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDD----TTYNI 560
Query: 336 VVKGFLQNGNVKG---LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ + + G+++ N ++E +P +V ++ G+ C+N G DKA + +
Sbjct: 561 IIHAYCKEGDLENAFQFHNKMVE-NSFKPD-VVTCNTLMNGL---CLN-GKLDKALKLFE 614
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
G V + Y ++ CK+ A D+ + GLQ D Y+ ++ A +
Sbjct: 615 SWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAG 674
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A ++ + E+ S + ++ A +E VE+P+ + + +
Sbjct: 675 RTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQ-DSASEAY 733
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+++ C +G+ ++AK L M+ + TY++L+ G V ++ +
Sbjct: 734 TKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQKRLT 783
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 182/451 (40%), Gaps = 58/451 (12%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
++H LL ++ +APAFAL MF+ R + + L +C A L++ +
Sbjct: 459 SLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARA-LELLRQ 513
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
R PN N + G C + + + + E G+ PN+ ++G +
Sbjct: 514 MPR-----------PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVI 562
Query: 264 YLYALKG-LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ G + E + + ++ + + V Y++LI GY G L++A LL
Sbjct: 563 SGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA----LLYRDRMV 618
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ TY +V +G L+ +++ G+ D +I+ G
Sbjct: 619 ERGVAMTVATYNLLVHALFMDGRGTEAYELV---EEMGGKGLAPDVFTYNILINGHCKEG 675
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
KA I + M+ G + Y + A K+ + E +L + G++ D+ Y+
Sbjct: 676 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 735
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE- 501
ALI + TS + AF + +M + RI +Y T+M GL R + +DE+ E
Sbjct: 736 ALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER 795
Query: 502 --------------------DPRVEVKTHD-------------WNSIIHAFCKAGRLEDA 528
D + ++ + +N++I CK G+ +DA
Sbjct: 796 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 855
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ ++ M+ P+D TY+SLI G T ++
Sbjct: 856 ENMVKEMVENGITPDDSTYISLIEGLTTEDE 886
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 109/486 (22%), Positives = 195/486 (40%), Gaps = 48/486 (9%)
Query: 101 PSKPVTNSLIA--HLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTA 158
P ++ SL + H D H+L +F ++ I P + +F + LGS+ N
Sbjct: 17 PKFIISTSLYSQLHHHHQDDEHSLVSSFNRILN-INPTPPIFEFGKI---LGSLVKINCY 72
Query: 159 APAFALVKCMFKNRY---FMPFELWGGFLVDICRKNSNFVAFLKVFEE------------ 203
A +L + M N + F + + + +F F + ++
Sbjct: 73 QTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTL 132
Query: 204 ----CCRIALDENLDFMKPNIYACNAALEGCCYG--------LQSVSDAEKVIETMSVLG 251
C + + + L F + A L CYG + S A +++ +
Sbjct: 133 IKGLCLKGQIHQALHF-HDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKL 191
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
V+PN + + L + +L S M G S +V YS+LISG+ LG L A
Sbjct: 192 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDA- 250
Query: 312 RTILLCLGGGNM---EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR 368
+G N E+ + T+ +V GF + G VK N++ K GI D
Sbjct: 251 ------IGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMK---QGIKPDV 301
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
++ + +KA SI + M G + + Y + +CK + EA L +
Sbjct: 302 VTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKE 361
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ + DV Y++LI+ S A L +M + + K +Y +I+ L +NH+
Sbjct: 362 MHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQ 421
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
+ A L ++ +D ++ + + +I CK GRL+DA+ ++ + TY
Sbjct: 422 VDKAIALLTKM-KDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYT 480
Query: 549 SLINGY 554
+I G+
Sbjct: 481 VMIQGF 486
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 6/183 (3%)
Query: 381 LGLSDKAHSIL---DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
L L + H L D++ A G + Y + CK +T+ A QL+ + +Q +
Sbjct: 136 LCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPN 195
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-MENHRPELMAAFL 496
V Y+ +I++ + AF L+ +M I +Y +++G + + + F
Sbjct: 196 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFN 255
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+ E+ +V T ++ ++ FCK GR+++AK L M+ +P+ TY SL++GY
Sbjct: 256 KMISEEINPDVYT--FSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCL 313
Query: 557 AEQ 559
+Q
Sbjct: 314 VKQ 316
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 117/287 (40%), Gaps = 12/287 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++Y + ++G C V +A+ V+ M G++P+ ++ L Y L K
Sbjct: 262 INPDVYTFSILVDGFCKE-GRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKA 320
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ + M + G ++ + Y+ +I+G+ K+ ++ A M + + TY
Sbjct: 321 KSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLF------KEMHCKNIIPDVVTY 374
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G ++G + L+ E + G+ D+ I+ A DKA ++L +
Sbjct: 375 NSLIDGLCKSGKISYALKLVDE---MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 431
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G + Y + CK R +A + D+ G + V Y +I+ +
Sbjct: 432 MKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDL 491
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
F A +L M + +Y I+ L E ++ L E++
Sbjct: 492 FDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMI 538
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 157/376 (41%), Gaps = 47/376 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN Y N + C +++DA + TM G+ P+ ++ L + KG+ +
Sbjct: 204 LHPNHYTFNLLVHTHCSK-GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEA 262
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
L + M G + Y++L+S + +LG ++ A++ + +M F + TY
Sbjct: 263 RALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVV------ESMTAYGFEPDLRTY 316
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+ G Q G V L E ++L S + D ++ AC S A +L+E
Sbjct: 317 NVLAVGLCQAGKVDEAFRLKDEMERL--STALPDVVTYNTLVDACFKWRCSSDALRLLEE 374
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G L + +K+ CKE + EA + I+ GL DV Y+ LI+A + +
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434
Query: 454 FQSAFSLFRDM-----------REARIYDL------------------KG------SYLT 478
AF+L +M +Y+L +G SY T
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+M + + PE D+++E ++ +N++I C+ RL++A L ++
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIER-KLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEK 553
Query: 539 QFEPNDQTYLSLINGY 554
P++ TY +I+ Y
Sbjct: 554 GLVPDETTYNIIIHAY 569
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 13/320 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFS-SQMVFYS 295
+ A KV+E+M+ G P+ ++ LA G ++ L+ M + +V Y+
Sbjct: 294 IKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYN 353
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI 353
+L+ K A R + M T+ VVK + G L +
Sbjct: 354 TLVDACFKWRCSSDALRLL------EEMRDKGVKPTLVTHNIVVKSLCKEGK---LEEAL 404
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ +K+ G+ D +I A G KA +++DEM G + L
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNL 464
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK R +A +L+ G D +Y ++ A + + A L+ M E ++
Sbjct: 465 CKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSI 524
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y T++ GL R + L+E+VE V +T +N IIHA+CK G LE+A R
Sbjct: 525 STYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDET-TYNIIIHAYCKEGDLENAFRFHN 583
Query: 534 RMIFLQFEPNDQTYLSLING 553
+M+ F+P+ T +L+NG
Sbjct: 584 KMVENSFKPDVVTCNTLMNG 603
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 108/541 (19%), Positives = 201/541 (37%), Gaps = 83/541 (15%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVV-YVIEKNPKLLDFQT 144
EA + + + P++P N+L++ + L + S+ Y E D +T
Sbjct: 261 EARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP-----DLRT 315
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE- 203
+ L + A AF L M + +P + LVD C K L++ EE
Sbjct: 316 YNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEM 375
Query: 204 -------------------CCRIALDENL--------DFMKPNIYACNAALEGCCYGLQS 236
C L+E L + + P++ N ++ C +
Sbjct: 376 RDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA-GN 434
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ--EKIVELESLMNEFGFSSQMVFY 294
V+ A +++ M G++ + +F LY L ++ E EL + GF V Y
Sbjct: 435 VAKAFTLMDEMVGKGLKMD--TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSY 492
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDF-SKETYCEVVKGFLQNGNVKGLANLI 353
++++ Y K N E A R L +E+ S TY ++KG + ++ L I
Sbjct: 493 GTVMAAYFKEYNPEPALR-----LWDQMIERKLIPSISTYNTLIKGLCR---MERLKEAI 544
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ +L G+V D + II A G + A ++M + +
Sbjct: 545 DKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGL 604
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C + +A +L G ++DV Y+ LI++ D +A F DM +
Sbjct: 605 CLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDA 664
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-----------------EVKTHD----- 511
+Y +++ L E R E L ++ + ++ +VK H+
Sbjct: 665 FTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEA 724
Query: 512 -------------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+ ++ C G+L++AK L M+ + TY++L+ G + +
Sbjct: 725 ESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQ 784
Query: 559 Q 559
+
Sbjct: 785 K 785
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 86/421 (20%), Positives = 178/421 (42%), Gaps = 41/421 (9%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
+EA + + L P N+LI + N+ +AF + ++ K K+ F T
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLI---DAYCKAGNVAKAFTLMDEMVGKGLKMDTF-T 456
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
++T+L ++ A L+ R F+P E+ G ++ K N L+++++
Sbjct: 457 LNTVLYNLCKMKRYEDAEELLHSP-PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
L P+I N ++G C ++ + +A + + G+ P+E+++ + +
Sbjct: 516 IERKL-------IPSISTYNTLIKGLCR-MERLKEAIDKLNELVEKGLVPDETTYNIIIH 567
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
Y +G E + M E F +V ++L++G G L+ A + + G +
Sbjct: 568 AYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG--K 625
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ D TY +++ + G+V + +E + L+P + ++SA G
Sbjct: 626 KVDVI--TYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNV-----VLSALSEAG 678
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLK------AYCKEHR---TAEATQLVMDISSSG 433
S++AH++L ++ G + P LK A KEH AE+++ D +
Sbjct: 679 RSEEAHNMLHKLADSG-KLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNA--- 734
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ Y + T + A ++ +M + + +Y+T+M GL++ + + A
Sbjct: 735 ----LETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQTHA 790
Query: 494 A 494
A
Sbjct: 791 A 791
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 157/377 (41%), Gaps = 49/377 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN Y N + C +++DA + TM G+ P+ ++ L + KG+ +
Sbjct: 204 LHPNHYTFNLLVHTHCSK-GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEA 262
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
L + M G + Y++L+S + +LG ++ A++ + +M F + TY
Sbjct: 263 RALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVV------ESMTAYGFEPDLRTY 316
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILD 392
+ G Q G V L E ++L G + V + ++ AC S A +L+
Sbjct: 317 NVLAMGLCQAGKVDEAFRLKDEMERL---GTALPDVVTYNTLVDACFKWRCSSDALRLLE 373
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM G L + +K+ CKE + EA + I+ GL DV Y+ LI+A +
Sbjct: 374 EMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAG 433
Query: 453 DFQSAFSLFRDM-----------REARIYDL------------------KG------SYL 477
+ AF+L +M +Y+L +G SY
Sbjct: 434 NVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYG 493
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
T+M + + PE D+++E ++ +N++I C+ RL++A L +
Sbjct: 494 TVMAAYFKEYNPEPALRLWDQMIER-KLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVE 552
Query: 538 LQFEPNDQTYLSLINGY 554
P++ TY +I+ Y
Sbjct: 553 KGLVPDETTYNIIIHAY 569
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 136/320 (42%), Gaps = 13/320 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFS-SQMVFYS 295
+ A KV+E+M+ G P+ ++ LA G ++ L+ M G + +V Y+
Sbjct: 294 IKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYN 353
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI 353
+L+ K A R + M T+ VVK + G L +
Sbjct: 354 TLVDACFKWRCSSDALRLL------EEMRDKGVKPTLVTHNIVVKSLCKEGK---LEEAL 404
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ +K+ G+ D +I A G KA +++DEM G + L
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNL 464
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK R +A +L+ G D +Y ++ A + + A L+ M E ++
Sbjct: 465 CKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSI 524
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y T++ GL R + L+E VE V +T +N IIHA+CK G LE+A R
Sbjct: 525 STYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDET-TYNIIIHAYCKEGDLENAFRFHN 583
Query: 534 RMIFLQFEPNDQTYLSLING 553
+M+ F+P+ T +L+NG
Sbjct: 584 KMVENSFKPDVVTCNTLMNG 603
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 107/541 (19%), Positives = 200/541 (36%), Gaps = 83/541 (15%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVV-YVIEKNPKLLDFQT 144
EA + + + P++P N+L++ + L + S+ Y E D +T
Sbjct: 261 EARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP-----DLRT 315
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE- 203
+ L + A AF L M + +P + LVD C K L++ EE
Sbjct: 316 YNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEM 375
Query: 204 -------------------CCRIALDENL--------DFMKPNIYACNAALEGCCYGLQS 236
C L+E L + + P++ N ++ C +
Sbjct: 376 RDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA-GN 434
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ--EKIVELESLMNEFGFSSQMVFY 294
V+ A +++ M G++ + +F LY L ++ E EL + GF V Y
Sbjct: 435 VAKAFTLMDEMVGKGLKMD--TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSY 492
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDF-SKETYCEVVKGFLQNGNVKGLANLI 353
++++ Y K N E A R L +E+ S TY ++KG + ++ L I
Sbjct: 493 GTVMAAYFKEYNPEPALR-----LWDQMIERKLIPSISTYNTLIKGLCR---MERLKEAI 544
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ + G+V D + II A G + A ++M + +
Sbjct: 545 DKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGL 604
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C + +A +L G ++DV Y+ LI++ D +A F DM +
Sbjct: 605 CLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDA 664
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-----------------EVKTHD----- 511
+Y +++ L E R E L ++ + ++ +VK H+
Sbjct: 665 FTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEA 724
Query: 512 -------------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+ ++ C G+L++AK L M+ + TY++L+ G + +
Sbjct: 725 ESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQ 784
Query: 559 Q 559
+
Sbjct: 785 K 785
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 157/377 (41%), Gaps = 49/377 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN Y N + C +++DA + TM G+ P+ ++ L + KG+ +
Sbjct: 206 LHPNHYTFNLLVHTHC-SKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEA 264
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
L + M + G + Y++L+S Y +LG ++ A+ + G F + TY
Sbjct: 265 RTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFG------FEPDLWTY 318
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILD 392
+ G Q G V L E + L IV V + ++ AC S A ++L+
Sbjct: 319 NVLAAGLCQAGKVDEAFKLKDEMEHL---SIVSPDVVTYNTLVDACFKYQRSSDALNLLE 375
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM G L + +K C+E + EA + ++ GL DV Y+ LI+A ++
Sbjct: 376 EMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKAR 435
Query: 453 DFQSAFSLFRDMREAR-----------IYDL------------------KG------SYL 477
+ AF L +M + +Y+L +G SY
Sbjct: 436 NVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYG 495
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
T+M + ++PE DE+ + ++ + +N++I C G+L +A L ++
Sbjct: 496 TVMAAYFKENKPEPALYLWDEMSKR-KLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMK 554
Query: 538 LQFEPNDQTYLSLINGY 554
P+D TY +I+ Y
Sbjct: 555 KGLVPDDTTYNIIIHAY 571
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 184/414 (44%), Gaps = 27/414 (6%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
+EA K +T L P N+LI + N+ +AF + ++ K+ F T
Sbjct: 403 EEALGRLKMMTEEGLAPDVITYNTLI---DAYCKARNVAKAFVLMDEMVRSGLKMDTF-T 458
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
++TLL ++ A L++ R F+P E+ G ++ K + L +++E
Sbjct: 459 LNTLLYNLCKEKRYEEAEELLRSP-PQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEM 517
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
+ L P+IY N ++G C + +K+ E M G+ P+++++ + +
Sbjct: 518 SKRKL-------TPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKK-GLVPDDTTYNIIIH 569
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
Y +G EK + + M E F +V ++L++G G LE A + G +
Sbjct: 570 AYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKG--K 627
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ D TY +++ ++G+V + +EA+ L+P + ++SA G
Sbjct: 628 KVDVI--TYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNV-----VLSALSEAG 680
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL--DVGN 440
S++A ++L +++ G + P +K+ +E +T + ++ D S G D +
Sbjct: 681 RSEEAQNMLHKLDESG-KLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQES 739
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
Y+ ++ + A ++ +M + + +Y+T+M GL++ + + AA
Sbjct: 740 YNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQKRQTHAA 793
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 158/419 (37%), Gaps = 66/419 (15%)
Query: 192 SNFVAFLKVFEECCRIA-LDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEK 242
S+ V V + CR L+E L +K P++ N ++ C ++V+ A
Sbjct: 384 SSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKA-RNVAKAFV 442
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+++ M G++ + + L Y + E+ EL + GF V Y ++++ Y
Sbjct: 443 LMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYF 502
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
K E A L + + S TY ++KG G L I + +L
Sbjct: 503 KENKPEPA----LYLWDEMSKRKLTPSIYTYNTLIKGLCTIGK---LTEAIDKLNELMKK 555
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEM-------NACGCSVGLGVYVPTLKAYCK 415
G+V D + II A G +KA ++M + C+ + C
Sbjct: 556 GLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNT-------LMNGLCL 608
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
+ +A +L + G ++DV Y+ LI+A D +A F DM + +
Sbjct: 609 HGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFT 668
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRV--------------EVKT------------ 509
Y +++ L E R E L ++ E ++ EVKT
Sbjct: 669 YNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCES 728
Query: 510 ---------HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+N + C G+L++AK L M+ + TY++L+ G + ++
Sbjct: 729 GGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 162/377 (42%), Gaps = 50/377 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P++ N ++ C Q V A ++E MS GV P+E++F L + +G E
Sbjct: 193 IQPDVVTLNTLIKALCRAHQ-VRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAA 251
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD-FSKE--T 332
+ +++ M E G S V + LI+GY K+G +E A LG E +D F + T
Sbjct: 252 LRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDA-------LGYIQQEIADGFEPDQVT 304
Query: 333 YCEVVKGFLQNGNVK-GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
Y V G QNG+V L + + Q+ + +V I+ G D+A I+
Sbjct: 305 YNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV----INCLSKNGELDEAKGIV 360
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++M GC + + A ++R EA L +++ GL DV ++ LI A
Sbjct: 361 NQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKV 420
Query: 452 QDFQSAFSLFRDMREAR------IYDL----------KGSYLTIMTGLMENHRPELMAAF 495
D LF +M+ + Y++ G+ L ++ + N P +
Sbjct: 421 GDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTY 480
Query: 496 ---LDEVVEDPRVEVKTH---------------DWNSIIHAFCKAGRLEDAKRTLRRMIF 537
+D + + R+E +N++I CKA R++DA + +M+
Sbjct: 481 NTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVK 540
Query: 538 LQFEPNDQTYLSLINGY 554
+PN+ TY S++ Y
Sbjct: 541 EGLQPNNITYNSILTHY 557
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/428 (19%), Positives = 166/428 (38%), Gaps = 42/428 (9%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P N + G C + V DA I+ G P++ ++ + G ++
Sbjct: 265 PTGVTVNVLINGYCK-MGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALK 323
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD--------FS 329
+ LM + G + Y+++I+ K G L+ A + + G + + S
Sbjct: 324 VMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALS 383
Query: 330 KETYCEVVKGFLQNGNVKGLA------NLIIEA--------------QKLEPSGIVVDRS 369
+ E + VKGL+ N++I A ++++ SG D
Sbjct: 384 SQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEV 443
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
+I ++G A +L+EM + GC Y + A CK+ R EA ++ +
Sbjct: 444 TYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQM 503
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+ G+ ++ LI+ ++ A L M + + +Y +I+T +
Sbjct: 504 DAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNI 563
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+ A L+ + + E+ + ++I+ CKAGR + A + LR M P + Y
Sbjct: 564 KKAADILETMTANG-FEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 622
Query: 550 LINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG-----FFDA 604
+I L ++ R+++ G+ + +V +L +GG FD
Sbjct: 623 VIQSLFRRNNLRDALNLF----REMTEVGEPPDALTYKIV---FRSLCRGGGPIKEAFDF 675
Query: 605 VMQVVEKS 612
++++V K
Sbjct: 676 LVEMVNKG 683
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 116/294 (39%), Gaps = 24/294 (8%)
Query: 182 GFLVDICRKNSNFVAF--LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD 239
G L D N+ VA EE +A + + + P++Y N + C V D
Sbjct: 367 GCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALC----KVGD 422
Query: 240 AE---KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
++ E M G P+E ++ L G ++L + M G V Y++
Sbjct: 423 PHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNT 482
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
+I K +E A M+ S+ T+ ++ G + + LI
Sbjct: 483 IIDALCKKMRIEEAEEVF------DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIE 536
Query: 355 EAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ K L+P+ I + I++ G KA IL+ M A G + + Y +
Sbjct: 537 QMVKEGLQPNNITYN-----SILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLING 591
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
CK RT A +L+ + G++ Y+ +I++ + + A +LFR+M E
Sbjct: 592 LCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTE 645
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
S+ +EM G + +KA C+ H+ A ++ ++SS G+ D + L++
Sbjct: 182 ESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQG 241
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
I ++A + M EA + ++ G + R E ++ + + D E
Sbjct: 242 FIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADG-FEP 300
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+N+ +H C+ G + A + + M+ +P+ TY ++IN
Sbjct: 301 DQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVIN 345
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 136/331 (41%), Gaps = 27/331 (8%)
Query: 255 NESSFGFLAYLYALKGLQEKIVE------LESLMNEF---GFSSQMVFYSSLISGYVKLG 305
+ +FG A L +VE LES+ NE G +V ++LI +
Sbjct: 152 DNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAH 211
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE----P 361
+ RT +L L + + T+ +++GF++ G+++ A L ++A+ +E P
Sbjct: 212 QV----RTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIE--AALRVKAKMMEAGCSP 265
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
+G+ V+ +I+ +G + A + + A G Y + C+ +
Sbjct: 266 TGVTVNV-----LINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSH 320
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A +++ + G DV Y+ +I + + A + M + ++ T++
Sbjct: 321 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 380
Query: 482 GLMENHRPELMAAFLDEV-VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
L +R E E+ V+ +V T +N +I+A CK G R M
Sbjct: 381 ALSSQNRLEEALDLARELTVKGLSPDVYT--FNILINALCKVGDPHLGIRLFEEMKSSGC 438
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
P++ TY LI+ + + + L + +E++
Sbjct: 439 TPDEVTYNILIDHLCSMGKLGNALDLLNEME 469
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 195/483 (40%), Gaps = 31/483 (6%)
Query: 82 NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLD 141
N D A + F+ + + PS N+L L L L+RA A ++++ +D
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTL---LDGLFRTGKLERAMALFQEMLDRRSHDMD 184
Query: 142 FQ------TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFV 195
+ T L+ + AN + A L++ M K R P + LVD K S
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESM-KARGCSPDVITYTILVDGLCKESKVA 243
Query: 196 AFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
A +V E LD PN+ N+ L G C + VSDA ++ M+ G PN
Sbjct: 244 AAWEVLRE----MLDAGC---VPNLVTYNSLLHGLCRA-RRVSDALALMRDMTCRGCTPN 295
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
++G L G + + + M + G + ++ Y+ LI+G K ++ + +
Sbjct: 296 VVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR 355
Query: 316 LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ-KLEPSGIVVDRSVGFGI 374
+ GG + D TY V+ G ++ + L++ + + P +++ ++ G+
Sbjct: 356 RAVSGGI--KPDVV--TYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 411
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
A G D+A + + M GC + Y + CK R EA L+ + G
Sbjct: 412 CKA----GKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGT 467
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
Y++LI+ A L +M + +Y ++ G+ R +
Sbjct: 468 PPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVV 527
Query: 495 FLDE----VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
L++ V + T ++S+I CKAGR+ +A + MI P+ TY L
Sbjct: 528 LLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSIL 587
Query: 551 ING 553
+ G
Sbjct: 588 LEG 590
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 171/408 (41%), Gaps = 39/408 (9%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF-GFLAYLYALKGLQEKIV 276
PN++ C+ ++G C +S+ DA + M G+ + + L+ L+ K L + +
Sbjct: 42 PNVFLCSILIDGLCKAKRSI-DALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALA 100
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
L M + G +V Y+SLI G K + A +M+ + S TY
Sbjct: 101 ILHE-MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELF------EHMKSVECSPSMVTYN 153
Query: 335 EVVKGFLQNGNVKGLANLIIEA---------QKLEPSGIVVDRSVGFGIISACVNLGLSD 385
++ G + G ++ L E + P+ V+ SV +I
Sbjct: 154 TLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPN--VITYSV---LIDGLCKANRVS 208
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A +L+ M A GCS + Y + CKE + A A +++ ++ +G ++ Y++L+
Sbjct: 209 QAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLL 268
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED--- 502
++ A +L RDM +Y T++ GL + R + A L ++++
Sbjct: 269 HGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGT 328
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
P + + +N +I+ CKA +++++ LRR + +P+ TY S+I G + +
Sbjct: 329 PDLMI----YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDE 384
Query: 563 VLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
+ +K +G + L + L K G D + E
Sbjct: 385 ACRLLLYVK-------SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 167/414 (40%), Gaps = 43/414 (10%)
Query: 213 LDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
L +P++Y A L G C G + A++ + M + PN FL + + GL
Sbjct: 2 LPICQPDVYTYAALLRGFCRG-GEIDQAQRCFDEMRSKNLVPNV----FLCSIL-IDGLC 55
Query: 273 EKIVELESL-----MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
+ +++L M G + V Y++L+SG K L+ A + E D
Sbjct: 56 KAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAIL--------HEMRD 107
Query: 328 FSKE----TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
E TY ++ G +N L + +E S +V + ++ G
Sbjct: 108 HGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNT---LLDGLFRTGK 164
Query: 384 SDKAHSILDEM-------NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
++A ++ EM CS + Y + CK +R ++A +L+ + + G
Sbjct: 165 LERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSP 224
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAF 495
DV Y L++ +A+ + R+M +A +Y +++ GL R + +A
Sbjct: 225 DVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALM 284
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
D V T + ++I CK GR++DA L MI P+ Y LING
Sbjct: 285 RDMTCRGCTPNVVT--YGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLC 342
Query: 556 TAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVV 609
A+Q + + ++R +S GIK + + +Y L + D +++
Sbjct: 343 KADQVDESIAL---LRRAVS----GGIKPDVVTYSSVIYGLCRSNRLDEACRLL 389
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 141/366 (38%), Gaps = 58/366 (15%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-- 271
D PN+ + ++G C VS A +++E+M G P+ + Y + GL
Sbjct: 185 DRCSPNVITYSVLIDGLCKA-NRVSQAVELLESMKARGCSPD-----VITYTILVDGLCK 238
Query: 272 QEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLGGGNMEQS 326
+ K+ ++ E G +V Y+SL+ G + + A + + C G
Sbjct: 239 ESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG------C 292
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
+ TY ++ G + G VK ++ A ++ G D + +I+ D+
Sbjct: 293 TPNVVTYGTLIDGLCKVGRVKDACAML--ADMIDKGG-TPDLMIYNMLINGLCKADQVDE 349
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
+ ++L + G + Y + C+ +R EA +L++ + S G DV Y LI+
Sbjct: 350 SIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLID 409
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ AF L+ EV+ +
Sbjct: 410 GLCKAGKVDEAFDLY------------------------------------EVMAGDGCD 433
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
++++I CKAGR+++A L RM+ + P+ TY SLI G + +
Sbjct: 434 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIEL 493
Query: 567 WHEIKR 572
E++R
Sbjct: 494 VEEMER 499
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 77/399 (19%), Positives = 139/399 (34%), Gaps = 54/399 (13%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
N+ + + LH +A + +T P+ +LI L + +K A
Sbjct: 260 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVG---RVKDAC 316
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
A + +I+K D + L+ + A+ + AL++ + +
Sbjct: 317 AMLADMIDKGGTP-DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 375
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIET 246
+CR N +E CR+ L P++ + ++G C V +A + E
Sbjct: 376 LCRSNR--------LDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA-GKVDEAFDLYEV 426
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
M+ G + ++ L G ++ L + M G + Y+SLI G L +
Sbjct: 427 MAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 486
Query: 307 LESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
L+ A + ME+S+ S TY ++ G + V L+ +A+
Sbjct: 487 LDEAIELV------EEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAK------- 533
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ CV G G ++ Y + CK R AEA
Sbjct: 534 -----------ARCVAAG---------------GTALDTIAYSSLIDGLCKAGRVAEALD 567
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
++ +G+ D Y L+E S+D L D
Sbjct: 568 YFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 606
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 150/339 (44%), Gaps = 13/339 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ + G C L + A K++ M+ G+ N ++ + L +G V
Sbjct: 283 PDVVTYGIMVHGYC-TLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVR 341
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M G +++++SG+ + G+L +A M++ + + TY
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF------DEMQKRGLAADGVTYTA 395
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + G +K ++ Q++E G+ VD +I +G +A + ++M
Sbjct: 396 LINGLCRAGELKEAERVL---QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ + Y CK+ A +L+ ++ S GL+L++ Y++LI + + +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A DM EA + +Y TI+ L ++ + + L E++ D ++ +N +
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML-DKGIKPTIVTYNVL 571
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++ FC +GR+E KR L M+ PN TY SL+ Y
Sbjct: 572 MNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQY 610
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 168/393 (42%), Gaps = 25/393 (6%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
VSDA +V+E M + GV + + F + + KG M + G ++ V Y++
Sbjct: 336 VSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTA 395
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQS--DFSKETYCEVVKGFLQNGNVKG---LAN 351
LI+G + G L+ A R + ME D TY ++ G+ + G + + N
Sbjct: 396 LINGLCRAGELKEAERVL------QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN 449
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++ QK +V ++ G+ G A+ +L EM + G + + Y +
Sbjct: 450 KMV--QKRVTPNVVTYTALSDGLCKQ----GDVCAANELLHEMCSKGLELNIFTYNSLIN 503
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
CK +A + ++D+ +GL+ DV Y +I A S++ A SL ++M + I
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
+Y +M G + R E L+ ++E + T +NS++ +C ++
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK-NIHPNTTTYNSLMKQYCIEKNMKSTTEI 622
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDA 591
+ M+ + PN+ TY LI G+ A L E+ +KG + + +A
Sbjct: 623 YKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMI-------EKGFRLTASSYNA 675
Query: 592 FLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ L K F ++ EK ++ ++ + Y
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 68/364 (18%), Positives = 128/364 (35%), Gaps = 84/364 (23%)
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+I + L +E +V Y ++ GY L LE+A
Sbjct: 268 RIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETA----------------------- 304
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+K L+ + +L P +I+ + G A ++++
Sbjct: 305 ------------IKLLSEMAARGLELNPVAYT-------SVIALLCDEGQVSDAVRVVED 345
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTA--------------------------------- 420
M G + V+ + +C++ A
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 421 --EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
EA +++ ++ GL +D Y LI+ AF + M + R+ +Y
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTA 465
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+ GL + L E+ +E+ +NS+I+ CKAG LE A RT+ M
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSK-GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN-LVDAF-LYAL 596
+P+ TY ++I +++ L H + +++ G K +N L++ F +
Sbjct: 525 GLKPDVYTYTTIIGALCQSKE----LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 580
Query: 597 VKGG 600
V+GG
Sbjct: 581 VEGG 584
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 155/348 (44%), Gaps = 25/348 (7%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
+ + D + ++ + +G PN ++ L +A E+ ++L M E G +V
Sbjct: 35 MANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVT 94
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLAN 351
Y+ L+ KL + +A + + GG F+ T+ +V GF + GNV
Sbjct: 95 YNVLVDALCKLSMVGAAQDVVKKMIEGG------FAPNVMTFNSLVDGFCKRGNVD---- 144
Query: 352 LIIEAQKLEPSGIVVDRSVGFGII--SACVNLGLSD-----KAHSILDEMNACGCSVGLG 404
+A+KL GI+V + + ++ SA ++ GL +A +L+EM A G +
Sbjct: 145 ---DARKL--LGIMVAKGMRPNVVTYSALID-GLCKSQKFLEAKEVLEEMKASGVTPDAF 198
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y + CK + EA Q++ ++ SG DV Y ++I A S A ++M
Sbjct: 199 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 258
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
R+ R +Y T++ GL + + LD++ E V ++++I+ CK+
Sbjct: 259 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDM 318
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
L +A++ L RM P+ TY ++I+G + + +KR
Sbjct: 319 LVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 366
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 157/351 (44%), Gaps = 57/351 (16%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M+PN+ +A ++G C Q +A++V+E M GV P+ +F + A ++ L +KI
Sbjct: 158 MRPNVVTYSALIDGLCKS-QKFLEAKEVLEEMKASGVTPD--AFTYSALIHGLCK-ADKI 213
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
E E ++ G + +V YSS+I + K G L A +T+ M + S +
Sbjct: 214 EEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTL------QEMRKQRKSPDV 267
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHS 389
TY V+ G + G + A +I++ +++ SG V+ V + +I+ + +A
Sbjct: 268 VTYNTVIDGLCKLGKI-AEAQVILD--QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQK 324
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+LD M GC+ + Y + CK R EA L+ + +G +V Y LI
Sbjct: 325 LLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 384
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
++ A + +MR A P L+
Sbjct: 385 KARKVDEAERVMEEMRNA------------------GCPPNLVT---------------- 410
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE--PNDQTYLSLINGYVTAE 558
+N++++ C +GR+++A++ ++RM + E P+ TY +++N ++++
Sbjct: 411 --YNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSD 459
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 140/339 (41%), Gaps = 14/339 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++ C L V A+ V++ M G PN +F L + +G + +
Sbjct: 90 PNLVTYNVLVDALCK-LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARK 148
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
L +M G +V YS+LI G K A + M+ S + + TY
Sbjct: 149 LLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL------EEMKASGVTPDAFTYSA 202
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + ++ ++ +++ SG D V II A G +A L EM
Sbjct: 203 LIHGLCKADKIEEAEQML---RRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR 259
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL-DVGNYDALIEASITSQDF 454
S + Y + CK + AEA ++ + SG L DV Y +I S
Sbjct: 260 KQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDML 319
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A L M +A +Y TI+ GL + R E A +L + ++ + +
Sbjct: 320 VEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE-EAEYLLQGMKRAGCAPNVVTYTT 378
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+I CKA ++++A+R + M PN TY +++NG
Sbjct: 379 LISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
++A +L+EM GC L Y + A CK A +V + G +V +++L
Sbjct: 74 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 133
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD--EVVED 502
++ + A L M + +Y ++ GL ++ + FL+ EV+E+
Sbjct: 134 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK------FLEAKEVLEE 187
Query: 503 PRVEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ T D ++++IH CKA ++E+A++ LRRM P+ Y S+I+ + + +
Sbjct: 188 MKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 247
Query: 560 YFSVLMMWHEIKRK 573
E++++
Sbjct: 248 LLEAQKTLQEMRKQ 261
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 105/259 (40%), Gaps = 53/259 (20%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
++++ +G D II+A N G D A +D + + GC + Y + A+ +
Sbjct: 14 EEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARA 70
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+ EA +L+ ++ G ++ Y+ L++A +A + + M E G
Sbjct: 71 KKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEG------GFA 124
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+MT +NS++ FCK G ++DA++ L M+
Sbjct: 125 PNVMT------------------------------FNSLVDGFCKRGNVDDARKLLGIMV 154
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYAL 596
PN TY +LI+G ++++ + E+K T DAF Y+
Sbjct: 155 AKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTP------------DAFTYSA 202
Query: 597 VKGGFFDAVMQVVEKSQEM 615
+ G A +E++++M
Sbjct: 203 LIHGLCKA--DKIEEAEQM 219
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 170/385 (44%), Gaps = 66/385 (17%)
Query: 267 ALKG-LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
LKG +++ I +ES + G +VFY++LI GY K G +ESA + ++
Sbjct: 219 CLKGRIEDGIKLIESRWGK-GCVPNIVFYNTLIDGYCKKGEVESAYKLF------KKLKM 271
Query: 326 SDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
F + +T+ +V GF + G + + L++E ++ G+ V+ + II A LG
Sbjct: 272 KGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLE---MKDRGLSVNVQMYNNIIDARYKLGF 328
Query: 384 SDKAHSILDEM--NACG-------------CSVG--------------LGV------YVP 408
KA L EM N C CS G G+ Y P
Sbjct: 329 DIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTP 388
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ YCK+ +AT ++++S+SGL++D+ +Y ALI + + + +A ++ M
Sbjct: 389 LVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRG 448
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
I Y +M GL + + + L E++ D + + +++ F + G L++A
Sbjct: 449 ILPDANIYNVLMNGLFKKGKLSMAKVMLTEML-DQNIAPDAFVYATLVDGFIRHGNLDEA 507
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
K+ + +I +P Y +I G+ + + ++ +++R H++
Sbjct: 508 KKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRA------------HHV 555
Query: 589 VDAFLYALVKGGF-----FDAVMQV 608
D F ++ + G+ +AV+++
Sbjct: 556 PDIFTFSTIIDGYVKQHNMNAVLKI 580
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 145/392 (36%), Gaps = 90/392 (22%)
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
E CC +P++ N + C V +AEK++E G+ PN+ ++
Sbjct: 341 ENCC-----------EPDLVTYNTLINHFC-SRGEVEEAEKLLEQTIRRGLAPNKLTYTP 388
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------SRT 313
L + Y +G K + M+ G M+ Y +LI G V G +++A +R
Sbjct: 389 LVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRG 448
Query: 314 ILL------CLGGGNMEQSDFSKE-----------------TYCEVVKGFLQNGNV---K 347
IL L G ++ S Y +V GF+++GN+ K
Sbjct: 449 ILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAK 508
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
L LIIE + L+P VG+ + I G+ D A +D+M + +
Sbjct: 509 KLFQLIIE-KGLDPG------VVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTF 561
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ Y K+H ++ + + +V Y +LI + + A LF MR
Sbjct: 562 STIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRS 621
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
+ LK S +T ++ +I +FCK +L
Sbjct: 622 ---HGLKPSVVT---------------------------------YSILIGSFCKEAKLG 645
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
A M+ + PND + L+NG+ +
Sbjct: 646 KAVSYFELMLINKCTPNDAAFHYLVNGFTNTK 677
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 107/278 (38%), Gaps = 45/278 (16%)
Query: 385 DKAHSILDEM--NACGCSVGLGVYVPTL--KAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
+ AH + DEM G + + Y ++ K C + R + +L+ G ++
Sbjct: 186 ETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVF 245
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV- 499
Y+ LI+ + +SA+ LF+ ++ ++ +++ G + E + L E+
Sbjct: 246 YNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMK 305
Query: 500 -------------VEDPR----VEVKTHD----------------WNSIIHAFCKAGRLE 526
+ D R ++K D +N++I+ FC G +E
Sbjct: 306 DRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVE 365
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEH 586
+A++ L + I PN TY L++GY +Y E+ G++ +
Sbjct: 366 EAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEM-------STSGLEVDM 418
Query: 587 NLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
A ++ LV G D + + ++ + D Y
Sbjct: 419 ISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIY 456
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 170/396 (42%), Gaps = 69/396 (17%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-QEK 274
+KP++ N+ ++G + L V +A+ V +M+ GV PN + Y + GL +EK
Sbjct: 304 IKPDVVTYNSLIDGY-FFLNKVKNAKYVFYSMAQSGVTPNVRT-----YTTMIDGLCKEK 357
Query: 275 IV-ELESLMNEFGFSS---QMVFYSSLISGYVKLGNLESA-----------------SRT 313
+V E SL E + + +V Y+SLI G K +LE A S T
Sbjct: 358 MVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYT 417
Query: 314 ILL---CLGGGNMEQSDFSKETYCEVVKGF---LQNGNV--KGL--ANLIIEA----QKL 359
ILL C GG +F + +VKG+ +Q NV GL A+L EA K+
Sbjct: 418 ILLDALCKGGRLENAKEFFQRL---LVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKM 474
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG-----------CSVGLGV--- 405
E G + D II A +DKA IL EM A G + L V
Sbjct: 475 EGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTK 534
Query: 406 ---------YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
Y + Y + A + ++ G+ +V Y +I+ +
Sbjct: 535 ACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDE 594
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A SLF +M+ ++ +Y +++ L +NH E A L E+ E ++ + + ++
Sbjct: 595 AMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEH-GIQPDVYSYTILL 653
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
CK+GRLE AK +R++ + N Q Y ++IN
Sbjct: 654 DGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMIN 689
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 149/374 (39%), Gaps = 36/374 (9%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N + C+ L ++ A V+ + G PN + L +G +K +
Sbjct: 96 PDLCTLNILMNCFCH-LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALY 154
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR------------------TIL--LC 317
+ GF V Y +LI+G K G ++ +R TI+ LC
Sbjct: 155 FHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLC 214
Query: 318 LGGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
+ D E TY +V GF G++K +L+ E ++ I
Sbjct: 215 KNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNE---MKLKNINP 271
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D +I A G A +L M + Y + Y ++ A +
Sbjct: 272 DVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVF 331
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
++ SG+ +V Y +I+ + A SLF +M+ + +Y +++ GL +N
Sbjct: 332 YSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKN 391
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
H E A ++ E ++ + + ++ A CK GRLE+AK +R++ + N QT
Sbjct: 392 HHLERAIALCKKMKEQ-GIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQT 450
Query: 547 YLSLINGYVTAEQY 560
Y +ING A+ +
Sbjct: 451 YNVMINGLCKADLF 464
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 17/341 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PNIY N + C+ LQ + A V+ + LG +PN ++F L ++G ++
Sbjct: 99 IPPNIYTLNILINSFCH-LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEV 157
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ L M GF +V Y +LI+G K+G+ +A R + +MEQ + + Y
Sbjct: 158 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL------RSMEQGNCQPDVVVY 211
Query: 334 CEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ ++ V NL E Q + PS + +I A NL ++L
Sbjct: 212 TSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYN-----SLIHALCNLCEWKHVTALL 266
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+EM + ++ + A CKE + EA +V + G++ +V Y+AL++
Sbjct: 267 NEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLR 326
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ A +F M SY T++ G + R E +E+ + T
Sbjct: 327 SEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIP-NTVT 385
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+++++H C GRL+DA M+ P+ +Y L++
Sbjct: 386 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLD 426
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 144/330 (43%), Gaps = 16/330 (4%)
Query: 249 VLGVRPNESSFGFLAYLYALKGLQE--KIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
+L + P S F L ++ ++ ++ L M+ FG + + LI+ + L
Sbjct: 59 MLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQR 118
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGI 364
L A + L G+ Q + + T+ +++G G + + +L + + +P+
Sbjct: 119 LGFAFSVLAKILKLGH--QPNIA--TFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPN-- 172
Query: 365 VVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
V +G +I+ +G + A +L M C + VY + + CK+ + +A
Sbjct: 173 ----VVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
L ++ G+ + Y++LI A +++ +L +M ++I + T++ L
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+ + +D +++ VE +N+++ C +++A + M+ F P+
Sbjct: 289 CKEGKVMEAHDVVDMMIKR-GVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 347
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+Y +LINGY ++ + ++ E+ RK
Sbjct: 348 VVSYSTLINGYCKIQRIEKAMYLFEEMCRK 377
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 109/278 (39%), Gaps = 24/278 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ + ++ C V +A V++ M GV PN ++ L + L+ ++ V+
Sbjct: 276 PNVVIFSTVVDALCKE-GKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 334
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCE 335
+ M GF+ +V YS+LI+GY K+ +E A M + + + TY
Sbjct: 335 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF------EEMCRKELIPNTVTYST 388
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL------SDKAHS 389
++ G G ++ L E +V R +S C+ L D+A +
Sbjct: 389 LMHGLCHVGRLQDAIALFHE---------MVTRGQIPDFVSYCILLDYLCKNRRLDEAIA 439
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+L + + +Y + C+ A L ++SS GL +V Y +I
Sbjct: 440 LLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLC 499
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
A LF +M+ +Y I G + N+
Sbjct: 500 QQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNN 537
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 125/306 (40%), Gaps = 24/306 (7%)
Query: 193 NFVAFLKVFEECCR----IALDENLDFM-----KPNIYACNAALEGCCYGLQS-VSDAEK 242
N V F V + C+ + + +D M +PN+ NA ++G C L+S + +A K
Sbjct: 277 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHC--LRSEMDEAVK 334
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
V +TM G P+ S+ L Y EK + L M V YS+L+ G
Sbjct: 335 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 394
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLE 360
+G L+ A + G + DF +YC ++ +N + L+ IE ++
Sbjct: 395 HVGRLQDAIALFHEMVTRGQIP--DFV--SYCILLDYLCKNRRLDEAIALLKAIEGSNMD 450
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
P D + +I G + A + +++ G + Y + C++ A
Sbjct: 451 P-----DIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLA 505
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
EA++L ++ G + Y+ + + + + L ++M AR + S T++
Sbjct: 506 EASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML-ARGFSADVSTSTVL 564
Query: 481 TGLMEN 486
++ +
Sbjct: 565 VEMLSD 570
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 142/351 (40%), Gaps = 43/351 (12%)
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
SFG + G EK +L + EFGFS +V Y++LI G K G +E A + +
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKA-KDLFFE 223
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
+G + +++ TY ++ G +NG K + +K++ G+ + +++
Sbjct: 224 MGKFGLVANEW---TYTVLIHGLFKNGIKKQGFEMY---EKMQEHGVFPNLYTYNCVMNQ 277
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ------------- 424
G + A + DEM G S + Y + C+E + EA +
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPN 337
Query: 425 ----------------------LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
L D+ S GL + Y+ L+ D A + +
Sbjct: 338 LITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVK 397
Query: 463 DMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKA 522
+M E I K +Y ++ + E A L +E+ + H ++ +IH FC
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNME-TAIQLRSSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
G++ +A R + M+ EPN+ Y ++I GY + L ++ +++ K
Sbjct: 457 GQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEK 507
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 155/374 (41%), Gaps = 36/374 (9%)
Query: 196 AFLKVFEECCRIA-LDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKVIET 246
+F V + CC ++++ D + PN+ ++GCC + + A+ +
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGE-IEKAKDLFFE 223
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
M G+ NE ++ L + G++++ E+ M E G + Y+ +++ K G
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGR 283
Query: 307 LESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQK---LEP 361
+ A + M + S TY ++ G + AN +++ K + P
Sbjct: 284 TKDAFKVF------DEMRERGVSCNIVTYNTLIGGLCREMKANE-ANKVMDQMKSYVINP 336
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
+ I + +I ++G KA S+ ++ + G S L Y + +C++ T+
Sbjct: 337 NLITYNT-----LIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSG 391
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A ++V ++ G++ Y LI+ S + ++A L M E + +Y ++
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIH 451
Query: 482 GL----MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
G N L + +++++E V +N++I +CK G A R R M
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKMLEPNEV-----IYNTMILGYCKEGSSYRALRLFRDMEE 506
Query: 538 LQFEPNDQTYLSLI 551
+ PN +Y LI
Sbjct: 507 KELAPNVASYSYLI 520
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 129/337 (38%), Gaps = 64/337 (18%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKI 275
PN+Y N + C ++ DA KV + M GV N + Y + GL + K
Sbjct: 266 PNLYTYNCVMNQLCKDGRT-KDAFKVFDEMRERGVSCN-----IVTYNTLIGGLCREMKA 319
Query: 276 VELESLMNE---FGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
E +M++ + + ++ Y++LI G+ +G L + + LC +++ S
Sbjct: 320 NEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKL---GKALSLCR---DLKSRGLSPSL 373
Query: 332 -TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY +V GF + G+ G A ++ +E + ++PS +
Sbjct: 374 VTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT----------------------- 410
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
Y + + + A QL + GL DV Y LI
Sbjct: 411 -----------------YTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGF 453
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM-ENHRPELMAAFLDEVVEDPRVEV 507
A LF+ M E + + Y T++ G E + F D +E+ +
Sbjct: 454 CIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRD--MEEKELAP 511
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
++ +I CK +L++A+ + +MI +P+D
Sbjct: 512 NVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSD 548
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 74/184 (40%), Gaps = 9/184 (4%)
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y+ +I A + SQ S+ F +M + + ++T ++ + F +E
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-- 154
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+V + + + +I C+AG +E + L + F PN Y +LI+G +
Sbjct: 155 SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
++ E+ G+ G+ ++ L K G ++ EK QE VF +
Sbjct: 215 EKAKDLFFEM-------GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPN 267
Query: 621 KWKY 624
+ Y
Sbjct: 268 LYTY 271
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 162/399 (40%), Gaps = 53/399 (13%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+PNE + + L +GL +K E+ M G + + Y+++I+ Y + G ++
Sbjct: 133 KPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHAS-- 190
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNG-NVKGLANLIIEAQKLEPSGIVVDRSVG 371
L L G E+ S TY V+ + G + +GL L E + GI D
Sbjct: 191 --LELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAE---MRHEGIQPDVITY 245
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
++ AC + GL D+A + MN G + Y ++ + K +R + ++L+ ++ S
Sbjct: 246 NTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMES 305
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA-------------RIYDLKGSYLT 478
G D+ +Y+ L+EA + A +FR M+ A +Y G Y
Sbjct: 306 GGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDD 365
Query: 479 IMTGLME----NHRP-------------------ELMAAFLDEVVEDPRVEVKTHDWNSI 515
+ +E N P E++ F D V E+ VE + +
Sbjct: 366 VRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEEN--VEPNMETYEGL 423
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I A K G EDAK+ L M P+ + Y +I + A Y L++++
Sbjct: 424 IFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFN------- 476
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
T + G ++F++A +GG + ++ + E
Sbjct: 477 TMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNE 515
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 161/413 (38%), Gaps = 87/413 (21%)
Query: 189 RKNSNFVAFLKVFEECCRIALD-ENL---------DFMKPNIYACNAALEGCCY-GLQSV 237
R + + + + V C R LD E L + ++P++ N L C + GL
Sbjct: 201 RVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGD- 259
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+AE V TM+ G+ P+ +++ +L + EK+ EL M G + Y+ L
Sbjct: 260 -EAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVL 318
Query: 298 ISGYVKLGNLE-----------------SASRTILLCLGGGN--------------MEQS 326
+ Y +LG+++ +A+ ++LL L G + + +
Sbjct: 319 LEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNT 378
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLS 384
D TY +++ F + G K + L + + +EP+ + G+I AC GL
Sbjct: 379 DPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYE-----GLIFACGKGGLY 433
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
+ A IL MN G Y ++A+ + EA + ++ G V Y++
Sbjct: 434 EDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSF 493
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I A ++ A ++ M E +GL +
Sbjct: 494 IHAFARGGLYKEAEAILSRMNE--------------SGLKRD------------------ 521
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
H +N +I AF + G+ E+A ++ M EPN+ T +++ Y +A
Sbjct: 522 ----VHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSA 570
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 155/344 (45%), Gaps = 19/344 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEK 274
+KPN+ N + G C A K+ +TM ++P+ ++ F++ L + ++E
Sbjct: 248 VKPNVVTYNTVINGYCLR-GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEA 306
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--SRTILLCLGGGNMEQSDFSKET 332
L L+ E G V Y++LI G G+L+ A R ++ G + S F T
Sbjct: 307 SGVLCKLL-ESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRG---IVASVF---T 359
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
Y ++ ++ ++I E ++ +EP VV ++ C G + KA S+
Sbjct: 360 YNLLIHALFLEKRIEEAEDMIKEMREKGVEPD--VVTYNIQINGYCRC---GNAKKALSL 414
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
DEM + Y + + K +R +EA + G+ D+ ++ALI+
Sbjct: 415 FDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCV 474
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ + AF L ++M A++ + ++ T+M G + E LDE+ E ++
Sbjct: 475 NGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKER-GIKPDHI 533
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N++I + K G ++DA M+ L F+P TY +LI GY
Sbjct: 534 SYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGY 577
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 160/370 (43%), Gaps = 17/370 (4%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
V E M + ++ + +F + + +G +K + M +G +V Y+++I+GY
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
G E+AS+ I + N++ + TY + + ++ + ++ KL S
Sbjct: 264 LRGKFEAASK-IFKTMKDKNLKPDCY---TYNSFISRLCKERRIEEASGVLC---KLLES 316
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G+V + +I C N G DKA + DEM G + Y + A E R EA
Sbjct: 317 GLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEA 376
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
++ ++ G++ DV Y+ I + + A SLF +M E I +Y +++
Sbjct: 377 EDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDV 436
Query: 483 LMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
+ +R E F + E ++ +N++I C G ++ A + L+ M +
Sbjct: 437 FGKRNRMSEAEEKFKKSIKEGMLPDIIM--FNALIDGHCVNGNIDRAFQLLKEMDNAKVV 494
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
P++ T+ +L+ GY + + E+K ++GIK +H + + K G
Sbjct: 495 PDEVTFNTLMQGYCRERKVEEAKKLLDEMK-------ERGIKPDHISYNTLISGYSKRGD 547
Query: 602 FDAVMQVVEK 611
++V ++
Sbjct: 548 MKDALEVFDE 557
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ N ++G C + V +A+K+++ M G++P+ S+ L Y+ +G + +E
Sbjct: 495 PDEVTFNTLMQGYCRE-RKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALE 553
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
+ M GF ++ Y++LI GY K+G + A
Sbjct: 554 VFDEMLSLGFDPTLLTYNALIQGYSKIGEADHA 586
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 109/303 (35%), Gaps = 41/303 (13%)
Query: 218 PNIYACNAALEGCC--------------------------YGL--------QSVSDAEKV 243
PN NA ++GCC Y L + + +AE +
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDM 379
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
I+ M GV P+ ++ Y G +K + L M E + Y+SLI + K
Sbjct: 380 IKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGK 439
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
+ A + G + + ++ G NGN+ L+ E ++ +
Sbjct: 440 RNRMSEAEEKFKKSIKEGMLPDIIM----FNALIDGHCVNGNIDRAFQLLKE---MDNAK 492
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+V D ++ ++A +LDEM G Y + Y K +A
Sbjct: 493 VVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDAL 552
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
++ ++ S G + Y+ALI+ + A L R+M+ I +YL ++ +
Sbjct: 553 EVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612
Query: 484 MEN 486
N
Sbjct: 613 KTN 615
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 103/244 (42%), Gaps = 18/244 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P++ N + G C + A + + M +RP ++ L ++ G + ++
Sbjct: 388 VEPDVVTYNIQINGYC-RCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVF---GKRNRM 443
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
E E + G ++ +++LI G+ GN++ A + + M+ + +
Sbjct: 444 SEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLL------KEMDNAKVVPDE 497
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
T+ +++G+ + V+ L+ E ++ GI D +IS G A +
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKE---RGIKPDHISYNTLISGYSKRGDMKDALEV 554
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
DEM + G L Y ++ Y K A +L+ ++ S G+ D Y +IEA T
Sbjct: 555 FDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKT 614
Query: 451 SQDF 454
+ D
Sbjct: 615 NDDL 618
>gi|89257692|gb|ABD65179.1| pentatricopeptide (PPR) repeat-containing protein [Brassica
oleracea]
Length = 567
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 125/588 (21%), Positives = 240/588 (40%), Gaps = 109/588 (18%)
Query: 133 IEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNS 192
+++N L++ + LL S+ A + A +++ M + + + ++ ++ + +
Sbjct: 28 LKQNSGLVNSDALTKLLLSLARAQMSESACNILRTMLEKGFVLTPDVLRLVVMHMVKTEV 87
Query: 193 NFVAFLKVFEECCR--IALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVL 250
+ C + L N + MKP+ N L G C +++IE M+
Sbjct: 88 GTCLASNYLVQVCHRFMELKRNSNVMKPDTVLFNLVL-GSCVRFGFSLKGQELIELMAKA 146
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG-FSSQMV-----FYSSLISGYVKL 304
V + S ++ +Y + G+++ EL+ L G SQ++ Y +L+S K
Sbjct: 147 DVVADGHSIVIMSCVYEMNGMRD---ELKKLKEGIGHVPSQLLCHYRRLYDNLLSLEFKF 203
Query: 305 GNLESASRTIL--------------------LCLGGGNME------------QSDFS--- 329
++ SA R +L L +G ++ Q D S
Sbjct: 204 DDIGSAGRLVLDICKKSKDLPSVQNLEKVMVLPVGSHHIRSGLKIRISPEILQRDSSLGV 263
Query: 330 --KETYCEVVKGFLQNGNVKGLANLIIEAQKLE--PSGIVVDRSVG-----FGIISACVN 380
+ T+ L N K LA L+ ++ E P + SVG +I ACV
Sbjct: 264 DSEATFVSCADSKLGVTN-KTLAKLVYGYKRRENLPELSKLLFSVGGTKLCADVIDACVA 322
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
+G + AH ILD++ + G + L Y L Y K A LV ++ +GL D +
Sbjct: 323 VGWLEAAHDILDDLVSAGNPMDLVTYRKVLSGYHKSKMLRNAEVLVRQMTKAGLVTDPSD 382
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV- 499
I D + + EL A + E+
Sbjct: 383 ---------------------------EIKDCENT--------------ELRALLVQEIN 401
Query: 500 -VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ-FEPNDQTYLSLINGYVTA 557
E +V ++ NS ++ FCKA DA T R++ ++ P Q+Y L++ Y +
Sbjct: 402 AGEQTKVPSMLYELNSSLYYFCKAKMQGDAVTTYRKIQKMKTISPTVQSYWILVDMYSSL 461
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
Y + + W +IKR +++ + ++ +L++ + ++GG+F+ VM+V+ +E +
Sbjct: 462 SMYREITVAWGDIKRNVAS---RELEVTQDLLEKLVVNFLRGGYFERVMEVISCMKEKGM 518
Query: 618 FVDKWKYKQAFMENHKK----LKVAK-LRKRNFKKMEALIAFKNWAGL 660
+ D YK +++ H+ LK A + + +++E + AF+ G+
Sbjct: 519 YNDVAMYKNEYLKVHRNLYRTLKAADAVTEAQAQRVEHVKAFRKLVGI 566
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 154/410 (37%), Gaps = 105/410 (25%)
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
+VFY+ +I GY K G+L+ A+R L M+ + ETY ++ GF + G + +
Sbjct: 239 HVVFYNMIIDGYCKKGDLQCATRA----LNELKMKGVLPTVETYGALINGFCKAGEFEAV 294
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY--- 406
L+ E + G+ ++ V +I A GL +A +L M GC + Y
Sbjct: 295 DQLLTE---MAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIM 351
Query: 407 --------------------------------VPTLKAYCKEHRTAEATQLVMDISSSGL 434
P + AYCK+ +A+ ++ I+ G
Sbjct: 352 INFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGE 411
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+ D+ +Y A I + + + A + M E ++ Y +M+GL + R M
Sbjct: 412 KSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKL 471
Query: 495 FLDEVVE---DPRVEV--------------------------KTHD-----WNSIIHAFC 520
L E+++ P V V K D +N++I FC
Sbjct: 472 LLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFC 531
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL-----MMWHEIKRKIS 575
K G++ DA L M + P++ TY ++I+GYV S L MM H+ K +
Sbjct: 532 KFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVI 591
Query: 576 T---------------------DGQKGIKFEHNLVDAFLYALVKGGFFDA 604
T G K N+V Y + GGFF A
Sbjct: 592 TYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVT---YTTLVGGFFKA 638
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 144/342 (42%), Gaps = 21/342 (6%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I N + C G + +A++++E G+ PN+ S+ L + Y KG K
Sbjct: 343 PDITTYNIMINFSCKG-GRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASG 401
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF-SKETYCEV 336
+ + E G S +V Y + I G V G ++ A L + ME+ F + Y +
Sbjct: 402 MLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVA-----LMVREKMMEKGVFPDAQIYNIL 456
Query: 337 VKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+ G + G + + L+ E + ++P D V +I + G D+A I +
Sbjct: 457 MSGLCKKGRIPAMKLLLSEMLDRNVQP-----DVYVFATLIDGFIRNGELDEAIKIFKVI 511
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G G+ Y +K +CK + +A + +++S D Y +I+ + D
Sbjct: 512 IRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDM 571
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENH---RPELMAAFLDEVVEDPRVEVKTHD 511
SA +F M + + +Y +++ G + R E + + + P V
Sbjct: 572 SSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVT---- 627
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ +++ F KAG+ E A M+ PND T+ LING
Sbjct: 628 YTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLING 669
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 147/393 (37%), Gaps = 59/393 (15%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF-GFSSQMVFYSSL 297
+ E V+E M ++P +F L YA G ++ ++L + E V + L
Sbjct: 113 EIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLL 172
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
++G VK G ++ A + M Q+D
Sbjct: 173 LNGLVKSGKVDVALQLY------DKMLQTD------------------------------ 196
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ +G VVD ++ NLG ++ ++ C + Y + YCK+
Sbjct: 197 --DGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKG 254
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
AT+ + ++ G+ V Y ALI + +F++ L +M AR ++ +
Sbjct: 255 DLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEM-AARGLNMN---V 310
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVK------THDWNSIIHAFCKAGRLEDAKRT 531
+ +++ E + E E R + +N +I+ CK GR+E+A
Sbjct: 311 KVFNNVID---AEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADEL 367
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDA 591
L + PN +Y L++ Y Y M +I+ G+K + A
Sbjct: 368 LEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLF----RIAEIGEKSDLVSYG---A 420
Query: 592 FLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
F++ +V G D + V EK E VF D Y
Sbjct: 421 FIHGVVVAGEIDVALMVREKMMEKGVFPDAQIY 453
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 156/358 (43%), Gaps = 51/358 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE--KI 275
P++ N + G C L + + K+++ M G PN+ ++G L + GL K+
Sbjct: 276 PDVDTFNDVIYGLCR-LNRIHEGAKLVDRMLFRGFTPNDITYGVL-----MNGLCRVGKV 329
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
E + L+N+ + V ++ LI+GYVK G L+ A+
Sbjct: 330 DEAQVLLNKVPTPND-VHFTILINGYVKSGRLDEAN------------------------ 364
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
FL + +K +G D +I GL A ++++M+
Sbjct: 365 ---AFLYDKMIK--------------NGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMS 407
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A GC+ L Y L +CK+++ EA ++ ++S+ G +L++ Y+ L+ A +
Sbjct: 408 ANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVP 467
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A + +M + ++ T++ GL + R E A +++ D V T +N++
Sbjct: 468 KALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLD-GVIANTVTYNTL 526
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
IHAF + G +++A + + M+F ++ TY LI + L ++ E+ RK
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRK 584
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 139/344 (40%), Gaps = 56/344 (16%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ L+G C Q + +A V+ MS G N + L G K ++
Sbjct: 413 PNLITYTTLLDGFCKKNQ-LEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALD 471
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA---SRTILLCLGGGNMEQSDFSKETYC 334
+ M++ G + +++LI G K+ E A R +LL + + TY
Sbjct: 472 MLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLL-------DGVIANTVTYN 524
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ FL+ G ++ L+ + G +D G+I A LG ++KA + DEM
Sbjct: 525 TLIHAFLRGGAIQEALKLV---NDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEM 581
Query: 395 ---NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+ ++ + + L C+ + A +L+ D+ GL DV Y++LI
Sbjct: 582 VRKDLVPSNISCNLLINGL---CRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKM 638
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ + AF+LF ++ E +P+ +
Sbjct: 639 GNIREAFNLFNKLQA------------------EGIQPDAIT------------------ 662
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+N++I C+AG +DA L R + F PND T+ L++ ++
Sbjct: 663 YNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFI 706
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 404 GVYV--PTLKAY-------CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
GVY PT K+Y + + A + ++ S G+ V + +++A +
Sbjct: 165 GVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEV 224
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKTHDWN 513
+A SL RDM + Y T++ L + R L+E+ + +V T +N
Sbjct: 225 DNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDT--FN 282
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+I+ C+ R+ + + + RM+F F PND TY L+NG
Sbjct: 283 DVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNG 322
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 172/388 (44%), Gaps = 43/388 (11%)
Query: 225 AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE 284
AA+ G C L + +A ++ + M V N + L Y ++G + L + E
Sbjct: 296 AAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVE 355
Query: 285 FGFSSQMVFYSSLISGYVKLGNLESASR--TILLCLGGGNMEQSDFSKETYCEVVKGFLQ 342
G + + +S LI K+GN+E A+ T + C+G ++ + F + FL
Sbjct: 356 VGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMG---LQPTVF--------ILNFLL 404
Query: 343 NGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV---------NLGLSDKAHSILDE 393
G K NL LE + +++D +V GI S LG ++A ++ D+
Sbjct: 405 KGFRK--QNL------LENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDK 456
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G + L Y + +CK+ +A +++ I SGL+ + Y L+E S D
Sbjct: 457 MIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGD 516
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ AF++F M A I ++ +I+ GL + R L+ ++ + + +N
Sbjct: 517 CEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPT-SMTYN 575
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
II + K G ++ A+ R M + PN TY SLING+ + + L M ++KR
Sbjct: 576 CIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKR- 634
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGF 601
KG++ +D +YA + GF
Sbjct: 635 ------KGLE-----LDITVYATLIAGF 651
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 131/329 (39%), Gaps = 14/329 (4%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
L V++A + + M G+ P+ S+ + + KG + E+ + + E G +
Sbjct: 444 LGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAIT 503
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV---KGLA 350
Y+ L+ G K G+ E A + G + +D+ T+ ++ G + G V +
Sbjct: 504 YTILMEGSFKKGDCEHAFNMFDQMVAAG-IVPTDY---TFNSIINGLCKVGRVSEARDKL 559
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
N I+ Q P+ + + II V G D A S+ EM S + Y +
Sbjct: 560 NTFIK-QSFIPTSMTYN-----CIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLI 613
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
+CK ++ A ++ D+ GL+LD+ Y LI QD ++A F + E +
Sbjct: 614 NGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLT 673
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
Y IM N A L + + + ++ + S+I K G+L A
Sbjct: 674 PNTIVY-NIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALD 732
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
M+ P+ Y LING Q
Sbjct: 733 LYSEMLCRGIVPDIFMYNVLINGLCNHGQ 761
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 170/440 (38%), Gaps = 72/440 (16%)
Query: 201 FEECCRIALDENLDFMKP-NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
F E R+ DE +D P N+ + ++G C V+ A ++ + + +GV PN + F
Sbjct: 308 FGEALRLK-DEMVDSRVPVNVAVATSLIKGYCVR-GDVNSALRLFDEVVEVGVTPNVAIF 365
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
L + G EK EL + M G + + L+ G+ K LE+A L
Sbjct: 366 SVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENA-----YLLL 420
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
G +E S TY V+ + G V NL D+ +G GI + V
Sbjct: 421 DGAVENGIASVVTYNIVLLWLCELGKVNEACNLW-------------DKMIGKGITPSLV 467
Query: 380 NL----------GLSDKAHSILDEMNACG--------------------CSVGLGVY--- 406
+ G D AH +++ + G C ++
Sbjct: 468 SYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQM 527
Query: 407 -----VPT-------LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
VPT + CK R +EA + Y+ +I+ +
Sbjct: 528 VAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAI 587
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
SA S++R+M + I +Y +++ G ++++ +L D++ + +E+ + +
Sbjct: 588 DSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDM-KRKGLELDITVYAT 646
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRK 573
+I FCK +E+A + +++ + PN Y +I+ Y + L + E I K
Sbjct: 647 LIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNK 706
Query: 574 ISTDGQKGIKFEHNLVDAFL 593
I D +K +L+D L
Sbjct: 707 IPCD----LKIYTSLIDGLL 722
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 151/375 (40%), Gaps = 48/375 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ + N + G C + DA +V+ + G++PN ++ L KG E
Sbjct: 462 ITPSLVSYNHMILGHCKK-GCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHA 520
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF-SKETYC 334
+ M G ++S+I+G K+G + A + ++QS + TY
Sbjct: 521 FNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKL-----NTFIKQSFIPTSMTYN 575
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G+++ G + ++ E + E S V+ + +I+ D A + D+M
Sbjct: 576 CIIDGYVKEGAIDSAESVYREMCRSEISPNVITYT---SLINGFCKSNKMDLALKMHDDM 632
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + + VY + +CK A + + GL + Y+ +I A +
Sbjct: 633 KRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNM 692
Query: 455 QSAFSLFRDMREARI-YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
++A +L ++M +I DLK Y +++ GL++ + E++ V +N
Sbjct: 693 EAALNLHKEMINNKIPCDLK-IYTSLIDGLLKEGKLSFALDLYSEMLCRGIVP-DIFMYN 750
Query: 514 SIIHAFCKAGRLEDAKRTLRRM---------------IFLQFE----------------- 541
+I+ C G+LE+A + L+ M I F+
Sbjct: 751 VLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDK 810
Query: 542 ---PNDQTYLSLING 553
P+D TY L+NG
Sbjct: 811 GLVPDDTTYDILVNG 825
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 134/347 (38%), Gaps = 37/347 (10%)
Query: 240 AEKVIETMSVLGVRPNESS-FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
E ++E G + ++S F +L Y + VE M E G + F + L+
Sbjct: 135 VELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLL 194
Query: 299 SGYVKLGNLESASR-----------------TILL--CLGGGNMEQSD------------ 327
+ ++ +E A R +L+ CL GG +++
Sbjct: 195 TAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLK 254
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
+Y V++ + ++ LA+ ++E E G V +I ACV LG +A
Sbjct: 255 LDAASYSIVIQAVCRGSDLD-LASKLVEGD--EELGWVPSEGTYAAVIGACVRLGNFGEA 311
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ DEM V + V +K YC A +L ++ G+ +V + LIE
Sbjct: 312 LRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEW 371
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ + A L+ M+ + ++ G + + E LD VE+ V
Sbjct: 372 CSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASV 431
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
T +N ++ C+ G++ +A +MI P+ +Y +I G+
Sbjct: 432 VT--YNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGH 476
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 114/287 (39%), Gaps = 27/287 (9%)
Query: 169 FKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALE 228
F + F+P + ++D K + V+ E CR + PN+ + +
Sbjct: 562 FIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEI-------SPNVITYTSLIN 614
Query: 229 GCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFS 288
G C + A K+ + M G+ + + + L + E + S + E G +
Sbjct: 615 GFCKS-NKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLT 673
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV------VKGFLQ 342
+ Y+ +IS Y L N+E+A N+ + + + C++ + G L+
Sbjct: 674 PNTIVYNIMISAYRNLNNMEAAL----------NLHKEMINNKIPCDLKIYTSLIDGLLK 723
Query: 343 NGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
G + +L E + GIV D + +I+ N G + A IL EM+ +
Sbjct: 724 EGKLSFALDLYSE---MLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPT 780
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ +Y + + KE EA +L ++ GL D YD L+ +
Sbjct: 781 VLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKL 827
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 17/341 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PNIY N + C+ LQ + A V+ + LG +PN ++F L ++G ++
Sbjct: 90 IPPNIYTLNILINSFCH-LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEV 148
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ L M GF +V Y +LI+G K+G+ +A R + +MEQ + + Y
Sbjct: 149 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL------RSMEQGNCQPDVVVY 202
Query: 334 CEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ ++ V NL E Q + PS + +I A NL ++L
Sbjct: 203 TSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYN-----SLIHALCNLCEWKHVTALL 257
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+EM + ++ + A CKE + EA +V + G++ +V Y+AL++
Sbjct: 258 NEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLR 317
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ A +F M SY T++ G + R E +E+ + T
Sbjct: 318 SEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIP-NTVT 376
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+++++H C GRL+DA M+ P+ +Y L++
Sbjct: 377 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLD 417
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 144/330 (43%), Gaps = 16/330 (4%)
Query: 249 VLGVRPNESSFGFLAYLYALKGLQE--KIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
+L + P S F L ++ ++ ++ L M+ FG + + LI+ + L
Sbjct: 50 MLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQR 109
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGI 364
L A + L G+ Q + + T+ +++G G + + +L + + +P+
Sbjct: 110 LGFAFSVLAKILKLGH--QPNIA--TFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPN-- 163
Query: 365 VVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
V +G +I+ +G + A +L M C + VY + + CK+ + +A
Sbjct: 164 ----VVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
L ++ G+ + Y++LI A +++ +L +M ++I + T++ L
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+ + +D +++ VE +N+++ C +++A + M+ F P+
Sbjct: 280 CKEGKVMEAHDVVDMMIKR-GVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 338
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+Y +LINGY ++ + ++ E+ RK
Sbjct: 339 VVSYSTLINGYCKIQRIEKAMYLFEEMCRK 368
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 109/278 (39%), Gaps = 24/278 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ + ++ C V +A V++ M GV PN ++ L + L+ ++ V+
Sbjct: 267 PNVVIFSTVVDALCKE-GKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 325
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCE 335
+ M GF+ +V YS+LI+GY K+ +E A M + + + TY
Sbjct: 326 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF------EEMCRKELIPNTVTYST 379
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL------SDKAHS 389
++ G G ++ L E +V R +S C+ L D+A +
Sbjct: 380 LMHGLCHVGRLQDAIALFHE---------MVTRGQIPDFVSYCILLDYLCKNRRLDEAIA 430
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+L + + +Y + C+ A L ++SS GL +V Y +I
Sbjct: 431 LLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLC 490
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
A LF +M+ +Y I G + N+
Sbjct: 491 QQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNN 528
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 125/306 (40%), Gaps = 24/306 (7%)
Query: 193 NFVAFLKVFEECCR----IALDENLDFM-----KPNIYACNAALEGCCYGLQS-VSDAEK 242
N V F V + C+ + + +D M +PN+ NA ++G C L+S + +A K
Sbjct: 268 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHC--LRSEMDEAVK 325
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
V +TM G P+ S+ L Y EK + L M V YS+L+ G
Sbjct: 326 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 385
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLE 360
+G L+ A + G + DF +YC ++ +N + L+ IE ++
Sbjct: 386 HVGRLQDAIALFHEMVTRGQIP--DFV--SYCILLDYLCKNRRLDEAIALLKAIEGSNMD 441
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
P D + +I G + A + +++ G + Y + C++ A
Sbjct: 442 P-----DIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLA 496
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
EA++L ++ G + Y+ + + + + L ++M AR + S T++
Sbjct: 497 EASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML-ARGFSADVSTSTVL 555
Query: 481 TGLMEN 486
++ +
Sbjct: 556 VEMLSD 561
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 192/473 (40%), Gaps = 29/473 (6%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQ 143
D A + + + P N++I L Q + RA + ++I+K+ K D Q
Sbjct: 285 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQ---AVDRADGVLQHMIDKDVKP-DIQ 340
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T + L+ + ++ M+ R P + L+D KN K+F
Sbjct: 341 TYNCLIHGYLSTGEWKEVVRRLEEMYA-RGLDPDVVTYSLLLDYLCKNGKCTEARKIFYC 399
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDAEKVIETMSVLGVRPNESSFGFL 262
R + KPN+ L G Y + +++D +++ M G+ PN F +
Sbjct: 400 MIRKGI-------KPNVTIYGILLHG--YAARGAIADLTDLLDLMVANGISPNNYIFNIV 450
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
YA K + ++ + + S M++ G S +V Y LI KLG ++ A + G
Sbjct: 451 LCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGV 510
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVN 380
S + +V G + L E Q + P+ + + I+ N
Sbjct: 511 TPNS----VVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNT-----IMCNLCN 561
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G A ++D M G + Y + +C RT EA QL+ + S GL+ D+ +
Sbjct: 562 EGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLIS 621
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEV 499
YD L+ + +A+ LFR+M + +Y TI+ GL R E +L+ +
Sbjct: 622 YDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMI 681
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+ ++ T +N I++ CK +++A + + + PN T+ +I+
Sbjct: 682 KSGQQWDIYT--YNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMID 732
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 109/517 (21%), Positives = 216/517 (41%), Gaps = 28/517 (5%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLT---ANSLFPSKPVTNSLIAHLSSLQDNHNLK 123
N+ S T L +EA + ++ + P+ N++I L Q +
Sbjct: 160 NVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQ---AVD 216
Query: 124 RAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGF 183
RA + ++I+K KL D T T++ + A A +++ M +
Sbjct: 217 RAEGVLQHMIDKGVKL-DVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTI 275
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
+ +C+ + + E + +D+ + KP++ N ++G C Q+V A+ V
Sbjct: 276 IDGLCKAQA-----VDRAEGVLQHMIDKGV---KPDVVTYNTIIDGLCKA-QAVDRADGV 326
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
++ M V+P+ ++ L + Y G +++V M G +V YS L+ K
Sbjct: 327 LQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCK 386
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEP 361
G A R I C+ ++ + Y ++ G+ G + L +L+ + A + P
Sbjct: 387 NGKCTEA-RKIFYCMIRKGIKPN---VTIYGILLHGYAARGAIADLTDLLDLMVANGISP 442
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
+ + + ++ A + D+A I M+ G S + Y + A CK R +
Sbjct: 443 NNYIFNI-----VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDD 497
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A + + G+ + +++L+ T ++ A LF +M + + + TIM
Sbjct: 498 AVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMC 557
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
L N ++A L + +E V +N++I C AGR ++A + L M+ + +
Sbjct: 558 NLC-NEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLK 616
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
P+ +Y +L+ GY + + ++ E+ RK T G
Sbjct: 617 PDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPG 653
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
C+ + Y + CK A ++ + G++LDV Y +I+ +Q A
Sbjct: 195 CTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAE 254
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
+ + M + + +Y TI+ GL + + L ++ D V+ +N+II
Sbjct: 255 GVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMI-DKGVKPDVVTYNTIIDG 313
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
CKA ++ A L+ MI +P+ QTY LI+GY++ + W E+ R++
Sbjct: 314 LCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGE-------WKEVVRRLEEMY 366
Query: 579 QKGIKFEHNLVDAFLYALVKGG 600
+G+ + L L K G
Sbjct: 367 ARGLDPDVVTYSLLLDYLCKNG 388
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 155/388 (39%), Gaps = 61/388 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG---VRPNESSFG-FLAYLYALKGLQE 273
PN+ +CN L+G C + V +A +++ TM+ G PN ++ + L + +
Sbjct: 159 PNVVSCNTLLKGLC-NEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDR 217
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG--------NMEQ 325
L+ ++++ G +V YS++I G K ++ A + + G N
Sbjct: 218 AEGVLQHMIDK-GVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTII 276
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLA------NLIIE----AQKLEPSGIV----VDRSVG 371
K + +G LQ+ KG+ N II+ AQ ++ + V +D+ V
Sbjct: 277 DGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVK 336
Query: 372 FGI------ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
I I ++ G + L+EM A G + Y L CK + EA ++
Sbjct: 337 PDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKI 396
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ G++ +V Y L+ + A + D+ + L + G+
Sbjct: 397 FYCMIRKGIKPNVTIYGILLHGYAA----RGAIADLTDLLD----------LMVANGISP 442
Query: 486 NHR--PELMAAFLDEVVEDPRVEVKTH-----------DWNSIIHAFCKAGRLEDAKRTL 532
N+ ++ A+ + + D + + + + +I A CK GR++DA
Sbjct: 443 NNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKF 502
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+MI PN + SL+ G T +++
Sbjct: 503 NQMINDGVTPNSVVFNSLVYGLCTVDRW 530
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 137/302 (45%), Gaps = 13/302 (4%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+PNE + + L +GL EK ++ M G S + Y++LI+ Y + G E +
Sbjct: 140 KPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVS-- 197
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNG-NVKGLANLIIEAQKLEPSGIVVDRSVG 371
L L E+ S TY V+ + G + +GL L E + GI D
Sbjct: 198 --LELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAE---MRHEGIQPDIVTY 252
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
++ AC N GL D+A + MN G + Y + + K +R + ++L+ +++S
Sbjct: 253 NTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMAS 312
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH--RP 489
+G ++ +Y+ L+EA + + A +FR M+EA +Y +I+ GL H
Sbjct: 313 TGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETY-SILLGLYGKHGRYD 371
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
E+ FL+ V + + T +N++I F + G ++ M EPN +TY
Sbjct: 372 EVRELFLEMKVSNTEPDAAT--YNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEG 429
Query: 550 LI 551
LI
Sbjct: 430 LI 431
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 169/417 (40%), Gaps = 54/417 (12%)
Query: 189 RKNSNFVAFLKVFEECCRIALD-ENL---------DFMKPNIYACNAALEGCC-YGLQSV 237
R + + + + V C R LD E L + ++P+I N L C GL
Sbjct: 208 RVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGD- 266
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+AE V TM+ GV P+ +++ +L + +K+ EL M G ++ Y+ L
Sbjct: 267 -EAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVL 325
Query: 298 ISGYVKLGNLESA-----------------SRTILLCLGGGN--------------MEQS 326
+ Y ++GN+E A + +ILL L G + + +
Sbjct: 326 LEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNT 385
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
+ TY ++ F + G K + L + + +EP+ + G+I AC GL
Sbjct: 386 EPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYE-----GLIFACGKGGLH 440
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D A IL M+ G Y ++AY + EA + ++ G + + Y+ L
Sbjct: 441 DDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTL 500
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDP 503
I ++ ++ M + + + S+ ++ G + + E + A+++ +E
Sbjct: 501 IYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVE--MEKS 558
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
R+ +++ +C AG ++++ + + PN Y ++ Y ++++
Sbjct: 559 RLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRW 615
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 108/243 (44%), Gaps = 15/243 (6%)
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
L+D+ + F + +F + ++ N++ + I+AC GL DA+K+
Sbjct: 395 LIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKG------GLH--DDAKKI 446
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+ MS G+ P+ ++ + Y + E+ + + MNE G + Y++LI + +
Sbjct: 447 LLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFAR 506
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
G L + ILL +G + + ++++ V++GF Q G + +E +E S
Sbjct: 507 -GGLYKETEAILLKMGDFGVAR---ERDSFNGVIEGFRQGGQFEEAIKAYVE---MEKSR 559
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+V D ++S GL D++ E+ A G + Y L Y K R EA
Sbjct: 560 LVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAY 619
Query: 424 QLV 426
+L+
Sbjct: 620 ELL 622
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 182/451 (40%), Gaps = 58/451 (12%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
++H LL ++ +APAFAL MF+ R + + L +C A L++ +
Sbjct: 454 SLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARA-LELLRQ 508
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
R PN N + G C + + + + E G+ PN+ ++G +
Sbjct: 509 MPR-----------PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVI 557
Query: 264 YLYALKG-LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ G + E + + ++ + + V Y++LI GY G L++A LL
Sbjct: 558 SGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA----LLYRDRMV 613
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ TY +V +G L+ +++ G+ D +I+ G
Sbjct: 614 ERGVAMTVATYNLLVHALFMDGRGTEAYELV---EEMGGKGLAPDVFTYNILINGHCKEG 670
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
KA I + M+ G + Y + A K+ + E +L + G++ D+ Y+
Sbjct: 671 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 730
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE- 501
ALI + TS + AF + +M + RI +Y T+M GL R + +DE+ E
Sbjct: 731 ALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER 790
Query: 502 --------------------DPRVEVKTHD-------------WNSIIHAFCKAGRLEDA 528
D + ++ + +N++I CK G+ +DA
Sbjct: 791 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 850
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ ++ M+ P+D TY+SLI G T ++
Sbjct: 851 ENMVKEMVENGITPDDSTYISLIEGLTTEDE 881
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 168/393 (42%), Gaps = 37/393 (9%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
VSDA +V+E M++ GV + F + + KG L M + G ++ V +++
Sbjct: 338 VSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTA 397
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
LI+G + G L+ A R + + G D TY ++ G+ + GN ++EA
Sbjct: 398 LINGLCRAGELKEADRVLQEMVDKG----LDVDVVTYTVLIDGYCKRGN-------MVEA 446
Query: 357 QKLEPSGIVVDRSVGFGIIS-ACVNLGLSDK-----AHSILDEMNACGCSVGLGVYVPTL 410
++ +V R V +++ ++ GL + A+ +L EM G + + Y +
Sbjct: 447 FRVH--NEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLI 504
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
CK +A +++ ++ ++G + DV Y LI+ S +F A ++ ++M + I
Sbjct: 505 NGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIK 564
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+Y +M G + R E L+ ++E V +NS++ +C ++
Sbjct: 565 PSIATYNVLMNGFCMSGRVEGGKKLLEWMLEK-NVRPNVVTYNSLMKQYCIDKNMKSTTE 623
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVD 590
+ M + PN+ TY LI G+ A L E+ +KG++ +
Sbjct: 624 IYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMI-------EKGLRLTASSYS 676
Query: 591 AFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWK 623
A + L K F E +VF DK +
Sbjct: 677 ALIRLLNKKKKF----------SEARVFFDKMR 699
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 122/289 (42%), Gaps = 14/289 (4%)
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++K L G +K E P +V + G + CV G + A +LDEM
Sbjct: 261 LLKALLSAGRLKDACQHFDEMSS--PPDVV---TYGTMVHGYCVR-GELENAVKLLDEMA 314
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A G VY + C + + ++A +++ D++ G+ LD + +I + D
Sbjct: 315 AKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLA 374
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+A LF +M++ + + ++ ++ GL + L E+V D ++V + +
Sbjct: 375 AARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMV-DKGLDVDVVTYTVL 433
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I +CK G + +A R M+ + PN TY +L +G + + HE+
Sbjct: 434 IDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEM----- 488
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KG++ ++ + L K G + M+++ + + D + Y
Sbjct: 489 --CNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTY 535
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/306 (17%), Positives = 133/306 (43%), Gaps = 11/306 (3%)
Query: 225 AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE 284
A + G C + + +A++V++ M G+ + ++ L Y +G + + + M
Sbjct: 397 ALINGLCRAGE-LKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVG 455
Query: 285 FGFSSQMVFYSSLISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSKETYCEVVKGFLQN 343
+ +V Y++L G K G++ +A+ + +C G + + TY ++ G +
Sbjct: 456 RRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKG-----LELNVYTYNSLINGLCKF 510
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
GN++ ++ E +E +G D +I G D+AH++L EM G +
Sbjct: 511 GNLEQAMRIMTE---MEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSI 567
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y + +C R +L+ + ++ +V Y++L++ ++ +S +++
Sbjct: 568 ATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKG 627
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M + + +Y ++ G + + F E++E + + ++++I K
Sbjct: 628 MHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEK-GLRLTASSYSALIRLLNKKK 686
Query: 524 RLEDAK 529
+ +A+
Sbjct: 687 KFSEAR 692
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 122/333 (36%), Gaps = 42/333 (12%)
Query: 209 LDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL 268
+D+ LD ++ ++G C V +A +V M V PN ++ L+
Sbjct: 419 VDKGLDV---DVVTYTVLIDGYCKRGNMV-EAFRVHNEMVGRRVAPNVVTYTALSDGLCK 474
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL------------- 315
+G EL M G + Y+SLI+G K GNLE A R +
Sbjct: 475 QGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYT 534
Query: 316 -------LCLGG-----GNMEQSDFSK------ETYCEVVKGFLQNGNVKGLANLI--IE 355
LC G NM Q K TY ++ GF +G V+G L+ +
Sbjct: 535 YTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWML 594
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
+ + P+ +V S+ + C++ + I M++ + Y +K +CK
Sbjct: 595 EKNVRPN-VVTYNSL---MKQYCIDKNMKSTT-EIYKGMHSQEVAPNENTYNILIKGHCK 649
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
EA ++ GL+L +Y ALI + F A F MR +
Sbjct: 650 ARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDV 709
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
Y M E DE+VE V+ K
Sbjct: 710 YSFYMDISFNEDNLESTITLCDELVEASHVKSK 742
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 152/356 (42%), Gaps = 10/356 (2%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I+ NA + C + +A + + G++P+ +FG Y+ G + +
Sbjct: 218 PDIFCYNAIIS-CLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 276
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M + G Y+ LI+G+ K GNL A G + +T +
Sbjct: 277 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDV----QTCSAFI 332
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G L+NG V+ + E L+ G+V D +IS G +KA + DEM
Sbjct: 333 HGLLKNGRVQEALKVFSE---LKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK 389
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + + +Y + CK A +L + GL+ D Y +I+ S++ A
Sbjct: 390 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 449
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
FSLF +M + Y ++ G + E E+++ + T +N++I
Sbjct: 450 FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ--KGFATTLSFNTLID 507
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+CK+ ++++A + + MI Q P+ TY ++I+ + A + +++ E++ +
Sbjct: 508 GYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER 563
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 176/415 (42%), Gaps = 67/415 (16%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN Y G C + +++A+ E M G++P+ ++ L + +G ++++
Sbjct: 8 PNTYTYTIITAGLCRA-KRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLR 66
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLGGGNMEQSDFSKETYCE 335
++ +M G ++ Y+ LI G K G +E A+ + ++ LG + T+C
Sbjct: 67 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG------CKPNSRTFCL 120
Query: 336 VVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGI--ISACVNLGLSDKAHSIL 391
+++G+ + N+ L+ E +K L PS + S G I + C +L L++K +L
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAV----SYGAMINGLCHCKDLSLANK---LL 173
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++M G + VY + Y E R EA +L+ +S SG+ D+ Y+A+I
Sbjct: 174 EKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII------ 227
Query: 452 QDFQSAFSLFRDMREARIY--DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
S S M EA Y +++G L +P+ +
Sbjct: 228 ----SCLSKAGKMEEASTYLLEIQGRGL----------KPDAVT---------------- 257
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+ + I + K G++ +A + M+ PN+ Y LING+ A L ++
Sbjct: 258 --FGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRH 315
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ G+ + AF++ L+K G ++V + +E + D + Y
Sbjct: 316 LH-------ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 363
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 121/560 (21%), Positives = 217/560 (38%), Gaps = 96/560 (17%)
Query: 19 SSSSTSPETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKS 78
S S +P+ F +I S K+ + + ++ + Q + L D +T L S
Sbjct: 212 SCSGVAPDI-----FCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYS 266
Query: 79 LLTNNTDEAWKSFKSLTANSLFPSKPVTNSLI-AHLSSLQDNHNLKRAFASVVYVIEKNP 137
T EA K F + + L P+ P+ LI H + NL A S+ +
Sbjct: 267 K-TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA----GNLMEAL-SIFRHLHALG 320
Query: 138 KLLDFQT----VHTLLGSMRNANTAAPAFALVKCMFKNRYFMP-FELWGGFLVDICRKNS 192
L D QT +H LL + R A F+ K + +P + + C++
Sbjct: 321 VLPDVQTCSAFIHGLLKNGR-VQEALKVFS----ELKEKGLVPDVFTYSSLISGFCKQGE 375
Query: 193 NFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
AF ++ +E C L + PNI+ NA ++G C + A K+ + M G+
Sbjct: 376 VEKAF-ELHDEMC-------LKGIAPNIFIYNALVDGLCKS-GDIQRARKLFDGMPEKGL 426
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLES 309
P+ ++ + Y E + E SL +E G Y++L+ G K G++E
Sbjct: 427 EPDSVTYSTMIDGYCK---SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 483
Query: 310 ASRTILLCLGGGNMEQSDFSKE-TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGI-- 364
A M Q F+ ++ ++ G+ ++ ++ + L E A+++ P +
Sbjct: 484 AMNLFR------EMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 537
Query: 365 --VVDRSVGFGIISAC---------VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
V+D G + NL + D ++ ++M A G Y + A+
Sbjct: 538 TTVIDWHCKAGKMEEANLLFKEMQERNL-IVDTVFALFEKMVAKGVKPDEVTYGLVIYAH 596
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CKE EA +L ++ G+ +D LI A +D A L +M E +
Sbjct: 597 CKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGL---- 652
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+P L A ++++ +F +AG++++A R
Sbjct: 653 --------------KPSLAAC------------------STLVRSFHEAGKMDEATRVFE 680
Query: 534 RMIFLQFEPNDQTYLSLING 553
+ L P+ T + L+NG
Sbjct: 681 GVKSLGLVPDTTTLIDLVNG 700
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 152/362 (41%), Gaps = 37/362 (10%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ C+A + G V +A KV + G+ P+ ++ L + +G EK E
Sbjct: 323 PDVQTCSAFIHGLLKN-GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 381
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
L M G + + Y++L+ G K G+++ A + M + + TY
Sbjct: 382 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF------DGMPEKGLEPDSVTYST 435
Query: 336 VVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G+ ++ NV +L E ++ ++P V + ++ C G +KA ++ E
Sbjct: 436 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYN-----ALVHGCCKEGDMEKAMNLFRE 490
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G + L + + YCK + EA+QL ++ + + D Y +I+ +
Sbjct: 491 MLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 549
Query: 454 FQSAFSLFRDMREAR-IYDLKGSYLTIMTG------------LMENHRPE--LMAAF--L 496
+ A LF++M+E I D + M ++ H E L+ AF
Sbjct: 550 MEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLR 609
Query: 497 DEVVEDPRVEVKT-HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
DEVV + T HD +I A CK L +A + L M L +P+ +L+ +
Sbjct: 610 DEVVGKGMLTKGTIHDL--LITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFH 667
Query: 556 TA 557
A
Sbjct: 668 EA 669
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 164/412 (39%), Gaps = 22/412 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ N + C +++ AE ++ M GV P+ ++ L Y Y+ G ++
Sbjct: 247 ISPDLSTYNCVVNALCKA-RAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEA 305
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V + M G +V +SL++ K G ++ A R + + + FS Y
Sbjct: 306 VRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDA-RDVFDSMAMKGQKTDIFS---YKI 361
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ G + L L + GI D + +I A G+ D+A I +EM
Sbjct: 362 MLNGYATKGCLVDLTELF---NLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMR 418
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y + A C+ + +A + + G+ + Y LI+ T D
Sbjct: 419 EQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLL 478
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDW 512
A L M + G + I+ L + R D + P V V +
Sbjct: 479 KAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMV----Y 534
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
N+++ +C G++E+A R M+ +PN Y +L+NGY + L ++ EI
Sbjct: 535 NTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREIL- 593
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KGIK L + L+ L + G + E + +D++ Y
Sbjct: 594 ------HKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTY 639
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 99/252 (39%), Gaps = 8/252 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M+P+I N + C L V DA+ + + +G+ PN + L Y L G E
Sbjct: 492 MRPDIGCFNFIINNLCK-LGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENA 550
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ + +M G +V Y +L++GY K+G ++ L G S Y
Sbjct: 551 LRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKP----STTLYNI 606
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G Q G ++ ++ SGI +DR ++ SD+A + E++
Sbjct: 607 ILHGLFQAGRT---VPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELH 663
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A + + + + R EA L IS SGL V Y ++ I +
Sbjct: 664 AMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVE 723
Query: 456 SAFSLFRDMREA 467
A +F M A
Sbjct: 724 EADDMFSSMENA 735
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 139/342 (40%), Gaps = 21/342 (6%)
Query: 218 PNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P++ N+ + C +G + DA V ++M++ G + + S+ + YA KG +
Sbjct: 319 PDVVTLNSLMASLCKHG--KIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLT 376
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
EL +LM G + ++ LI Y K G L+ A TI+ M + + TY
Sbjct: 377 ELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRA--TIIF----NEMREQGVEPDVVTYS 430
Query: 335 EVVKGFLQNGNVKGLA---NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
V+ + G + N +I+ Q + PS + F I C + L +L
Sbjct: 431 TVIAALCRIGKMDDAVEKFNQMID-QGVAPS----ISTYHFLIQGFCTHGDLLKAKDLVL 485
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
MN G +G + + CK R +A + S GL +V Y+ L++
Sbjct: 486 QMMNK-GMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLV 544
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
++A +F M A I Y T++ G + R + + E++ ++ T
Sbjct: 545 GKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKG-IKPSTTL 603
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N I+H +AGR AK M + TY ++ G
Sbjct: 604 YNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGG 645
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 91/235 (38%), Gaps = 49/235 (20%)
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL--DVGNYDALIEA 447
+L M GC + Y LK+ C + ++ +A +L+ ++ G + Y+ +I+
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
D A LF +M + I P+L
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGI------------------SPDLST-------------- 253
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N +++A CKA ++ A+ LR+M+ P++ TY SLI GY + Q W
Sbjct: 254 ----YNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQ-------W 302
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE----KSQEMKVF 618
E R +GI + +++ + +L K G V + K Q+ +F
Sbjct: 303 KEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIF 357
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 165/383 (43%), Gaps = 44/383 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ +CN L +S S+A V + ++ LG+ P+ + + Y G V+
Sbjct: 181 PSLRSCNRLLSSLVRKGES-SNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVD 239
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M+ GF +V Y+SLI G V +G++E A + L G + +K T ++
Sbjct: 240 FVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILR----NKVTLTLLI 295
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
KG+ + ++ ++ E ++ E G+V+D +I + D A + DEM
Sbjct: 296 KGYCRQCKLEEAEKVLREMERSE--GMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNV 353
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + L + + YCK + +EA +L+M + L+ + +Y L++ A
Sbjct: 354 GLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKA 413
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMEN-------HRPELM---AAFLDEVVEDPRVEV 507
S++ +M I ++ +++ GL H LM DEV +++
Sbjct: 414 ISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDL 473
Query: 508 ------------------------KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
T+ +N++I+ FCK ++ +A+ T RM L FEP+
Sbjct: 474 LFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPD 533
Query: 544 DQTYLSLINGYV---TAEQYFSV 563
TY +LI+GY E+ F V
Sbjct: 534 GVTYRTLIDGYCKLGNVEEAFKV 556
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/474 (20%), Positives = 180/474 (37%), Gaps = 89/474 (18%)
Query: 210 DENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL 268
DE L+ ++ N++ CNA + G C Q VS+AE+++ M + P S+ L +
Sbjct: 348 DEMLNVGLRMNLFICNALINGYCKNGQ-VSEAERLLMRMVDWDLEPESYSYSTLMDGFCR 406
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
+GL K + + + M G S +V ++SL+ G ++G E A L L G
Sbjct: 407 EGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPD--- 463
Query: 329 SKETYCEVVKGFLQNGN--------------------------VKGLANL--IIEAQK-- 358
+ +YC ++ + G + G + +IEA++
Sbjct: 464 -EVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETF 522
Query: 359 -------LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
EP G+ +I LG ++A + ++M + +Y +
Sbjct: 523 NRMKELGFEPDGVTYRT-----LIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIG 577
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE----- 466
K +T E L+ ++ GL +V Y LI AF+ + DM E
Sbjct: 578 GLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAP 637
Query: 467 ---------ARIYDL-KGSYLTIMTGLMENHRPELMAAFLDEVVE------DPRVEVKTH 510
+ +Y L + ++ M N L + D + + D + T
Sbjct: 638 NVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTL 697
Query: 511 D-------------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
D +N I CK+G+++DAK+ ++ F P++ TY +LI+GY A
Sbjct: 698 DESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAA 757
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
+ E+ + +G+ +A + L K G D ++ +K
Sbjct: 758 GNVNDAFSLRDEMLK-------RGLAPNIITYNALINGLCKSGNLDRAQKLFDK 804
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 132/324 (40%), Gaps = 53/324 (16%)
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
E FS + ++K + + G +K ++ KL G V ++S+ V G
Sbjct: 142 EDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKL---GCVPSLRSCNRLLSSLVRKGE 198
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
S A + D +N G + + AYCK+ A V ++ G +L+V Y++
Sbjct: 199 SSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNS 258
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG-------------LMENHRPE 490
LI+ ++ D + A + + M E I K + ++ G L E R E
Sbjct: 259 LIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSE 318
Query: 491 LMAAFLDE----VVEDPRVEVKTHD--------------------WNSIIHAFCKAGRLE 526
M LDE V+ D V D N++I+ +CK G++
Sbjct: 319 GMV--LDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVS 376
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEH 586
+A+R L RM+ EP +Y +L++G+ + +++E+ R + +
Sbjct: 377 EAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLR---------VGIQS 427
Query: 587 NLV--DAFLYALVKGGFFDAVMQV 608
N+V ++ L L + G F+ + V
Sbjct: 428 NVVTHNSLLKGLCRVGAFEDALHV 451
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 149/389 (38%), Gaps = 36/389 (9%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTV 145
EA ++F + P +LI L N++ AF V +EK L +
Sbjct: 517 EAEETFNRMKELGFEPDGVTYRTLIDGYCKLG---NVEEAF-KVKEKMEKEAILPSIELY 572
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDIC---RKNSNFVAFLKVFE 202
++L+G + + L+ M +G + C R + F A+ + E
Sbjct: 573 NSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIE 632
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
+ PN+ C+ + Y L + +A +++ M L V + F L
Sbjct: 633 KG-----------FAPNVIICSKIVSSL-YRLGRIDEANMLLQKMVNLDVFLDHGYFDRL 680
Query: 263 AYLYALKGLQEKIVE-LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+KI + L+ F + +V Y+ I+G K G ++ A + L G
Sbjct: 681 HKADDGNLDSQKIADTLDESSKSFSLPNSVV-YNIAIAGLCKSGKVDDAKKIFSSLLLRG 739
Query: 322 NMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISA 377
FS + TYC ++ G+ GNV +L E K L P+ I + +I+
Sbjct: 740 ------FSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYN-----ALING 788
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
G D+A + D+++ G + + Y + YCK T EA L + G+
Sbjct: 789 LCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPS 848
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ Y ALI D A +L +MRE
Sbjct: 849 LITYSALIYGFCKQGDMGKATNLLDEMRE 877
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PNI NA + G C ++ A+K+ + + + G+ PN S+ L Y G +
Sbjct: 775 LAPNIITYNALINGLCKS-GNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREA 833
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ--SDFSKETY 333
++L + M + G S ++ YS+LI G+ K G++ A+ + M + +D + +
Sbjct: 834 LDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLL------DEMRELFADQNIAKF 887
Query: 334 CEVVKGFLQNGNVKGLANL 352
++V+G ++ G VK +A L
Sbjct: 888 VKLVEGHVKCGEVKKIAKL 906
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 133/576 (23%), Positives = 227/576 (39%), Gaps = 124/576 (21%)
Query: 103 KPVTNSLIAHLSSLQDNHNLKRAFAS--------VVYVIEK--NPK--LLDFQTVHTLLG 150
K + + +I L + Q +H+L+ FA +VI++ NP+ L F TL
Sbjct: 28 KTLIHDVIQILKTNQSHHSLQSRFAESQIIVSNVAHFVIDRIHNPQHGLYFFHWASTLPF 87
Query: 151 SMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLK-------VFEE 203
S N A + L+K M K R F E+ L D+ KN NF L+ V+ E
Sbjct: 88 SSPLNNVAYSS--LLKLMVKYRLFSEIEI---VLEDM--KNRNFKPTLEALNSVICVYAE 140
Query: 204 CCRIALDENLDFMKPNIYAC------NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNES 257
+ + +M +Y C N +L C V A ++ + M R +
Sbjct: 141 YGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLE---RGGDH 197
Query: 258 SFGFLAYLYAL----KGLQE--KIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLE 308
+ Y++ KGL + K+ E L+++ G +VFY+ +I GY K G+L+
Sbjct: 198 GLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLK 257
Query: 309 SASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
A+R ++ F + ETY ++ GF + G + + L+ E + G+ V
Sbjct: 258 RATRVF------EELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVM---GLNV 308
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY-------------------- 406
+ V II A GL DKA ++ M GC + Y
Sbjct: 309 NVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFL 368
Query: 407 ---------------VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
P + AYCK+ A+ ++ I+ +G + D+ +Y A I S+
Sbjct: 369 ERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAG 428
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PE---LMAAFLD---------- 497
+ A + M E ++ Y +M+GL + R P L++ LD
Sbjct: 429 GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMY 488
Query: 498 --------------------EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
EVV ++ +N +I CK G++ DA + +M
Sbjct: 489 ATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKI 548
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
P++ T+ ++I+GYV S L M+ ++ ++
Sbjct: 549 ANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQ 584
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 155/398 (38%), Gaps = 65/398 (16%)
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE-FGFSSQMVFYSS 296
S+ E V+E M +P + + +YA G +K V++ ++ E + +V +S
Sbjct: 110 SEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNS 169
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
L++ VK G ++ A CE+ L+ G GL
Sbjct: 170 LLNCLVKNGKVDVA-----------------------CELYDKMLERGGDHGL------- 199
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+VVD ++ ++G ++ ++D+ GC + Y + YCK+
Sbjct: 200 ------DLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKK 253
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA--------- 467
AT++ ++ G + Y ALI+ + FQ L +M
Sbjct: 254 GDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVF 313
Query: 468 -RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
I D K Y GL++ + M + E+ +P + +N +I+ C GR++
Sbjct: 314 NSIIDAKYKY-----GLVD--KAAEMMRMMTEMGCEPDITT----YNILINFSCSGGRIK 362
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEH 586
+A+ L R PN +Y L++ Y Y +M ++ KI+ G K +
Sbjct: 363 EAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDY----VMASDMLFKIAETGDKPDLVSY 418
Query: 587 NLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
AF++ V GG D + V EK E VF D Y
Sbjct: 419 G---AFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIY 453
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 159/405 (39%), Gaps = 24/405 (5%)
Query: 169 FKNRYFMP-FELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAAL 227
K + F+P E +G + C K F ++ E + L+ N+ I A
Sbjct: 266 LKLKGFLPTLETYGALIDGFC-KAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYK-- 322
Query: 228 EGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGF 287
YGL V A +++ M+ +G P+ +++ L G ++ E E
Sbjct: 323 ----YGL--VDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTL 376
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK 347
Y+ L+ Y K G+ AS + G ++ D +Y + G + G +
Sbjct: 377 LPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETG--DKPDLV--SYGAFIHGSVAGGEID 432
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
L++ + +E G+ D + ++S G A +L EM +Y
Sbjct: 433 --VALMVREKMME-KGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYA 489
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ + + + +AT+L + S G+ V Y+ +I+ A S M+ A
Sbjct: 490 TLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIA 549
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+ ++ T++ G ++ H + ++++ + + + S+I+ FCK +
Sbjct: 550 NHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQ-KYKPNVVAYTSLINGFCKIADMSR 608
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYV------TAEQYFSVLMM 566
A++ R M EPN TY LI G+ A +F +++M
Sbjct: 609 AEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLM 653
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 135/341 (39%), Gaps = 17/341 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+I N + C G + +AE+ +E + PN+ S+ L + Y +G
Sbjct: 342 EPDITTYNILINFSCSG-GRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMAS 400
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF-SKETYCE 335
++ + E G +V Y + I G V G ++ A L + ME+ F + Y
Sbjct: 401 DMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVA-----LMVREKMMEKGVFPDAQIYNV 455
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + G L+ E L + D + ++ + DKA + + +
Sbjct: 456 LMSGLCKKGRFPAAKLLLSEMLDLN---LQPDAYMYATLVDGFIRNNELDKATELFEVVM 512
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ G G+ Y +K CK + +A V + + D + +I+ + D
Sbjct: 513 SKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLD 572
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTG---LMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
SA +F M + + +Y +++ G + + R E + + +P V +
Sbjct: 573 SALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVT----Y 628
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+I F K G+ E A M+ PND T+ LING
Sbjct: 629 TILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLING 669
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 130/350 (37%), Gaps = 23/350 (6%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP++ + A + G G + A V E M GV P+ + L KG
Sbjct: 412 KPDLVSYGAFIHGSVAG-GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAK 470
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L S M + Y++L+ G+++ L+ A+ + + G D Y +
Sbjct: 471 LLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKG----IDPGVVGYNVM 526
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+KG + G + + + K++ + D +I V D A + +M
Sbjct: 527 IKGLCKCGK---MTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMK 583
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
+ Y + +CK + A ++ + S L+ +V Y LI + +
Sbjct: 584 QKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEK 643
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLM-------------ENHRPELMAAFLDEVVEDP 503
A S F M ++ ++ GL EN R ++ F + E
Sbjct: 644 AASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGW 703
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ T +NSII CK G ++ A+ +M+ F + + +L++G
Sbjct: 704 SQVIAT--YNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHG 751
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 143/331 (43%), Gaps = 18/331 (5%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y++L++GY + G+L++A R I G+M + TY +++ G V +L+
Sbjct: 113 YNTLVAGYCRYGHLDAARRLI------GSMPVAP-DAYTYTPLIRVLCDRGRVADALSLL 165
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ + VV +V + C N G ++A ++LDEM A GC+ + Y +
Sbjct: 166 DDMLRRGCQPNVVTYTVLLE--AMCKNSGF-EQAMAVLDEMRAKGCTPNIVTYNVIINGM 222
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C+E R +A L+ + S G Q D +Y L++ S+ + LF +M E +
Sbjct: 223 CREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNE 282
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
++ ++ E L ++ E T N +I++ CK GR++DA + L
Sbjct: 283 VTFDMLIRFFCRGGMVERAIQVLQQMTEH-ECATNTTLCNIVINSICKQGRVDDAFKFLN 341
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
M P+ +Y +++ G AE+ W++ K + + + F+
Sbjct: 342 NMGSYGCNPDTISYTTVLKGLCRAER-------WNDAKELLKEMVRNNCPPNEVTFNTFI 394
Query: 594 YALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
L + G + + ++E+ QE V Y
Sbjct: 395 CILCQKGLIEQAIMLIEQMQEHGCTVGVVTY 425
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 167/395 (42%), Gaps = 24/395 (6%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
V+DA +++ M G +PN ++ L + G ++ + L+ M G + +V Y+
Sbjct: 158 VADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDE-MRAKGCTPNIVTYN 216
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
+I+G + G ++ A R +L L + S Y ++KG + + L E
Sbjct: 217 VIINGMCREGRVDDA-RDLLNRLFSYGCQPDTVS---YTTLLKGLCASKRWDDVEELFAE 272
Query: 356 --AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ P+ + D + F G+ ++A +L +M C+ + + +
Sbjct: 273 MMEKNCMPNEVTFDMLIRFFCRG-----GMVERAIQVLQQMTEHECATNTTLCNIVINSI 327
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK+ R +A + + ++ S G D +Y +++ ++ + A L ++M +
Sbjct: 328 CKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNE 387
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
++ T + L + E A L E +++ V +N++++ FC G ++ A R
Sbjct: 388 VTFNTFICILCQKGLIE-QAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFR 446
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
M +PN TY +L+ G AE+ + + E+ + D + + LV+ F
Sbjct: 447 SM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHR---DCPPNVVTFNVLVNFF- 499
Query: 594 YALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAF 628
+ GF D +++VE+ E + Y F
Sbjct: 500 ---CQKGFLDEAIELVEQMMEHGCTPNLITYNTLF 531
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 132/336 (39%), Gaps = 47/336 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ + L+G C + +DA+++++ M PNE +F + KGL E+ +
Sbjct: 350 PDTISYTTVLKGLCRA-ERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 408
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M E G + +V Y++L++G+ G+++SA + TY ++
Sbjct: 409 LIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELF-------RSMPCKPNTITYTTLL 461
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + A L+ E + VV +V +++ G D+A ++++M
Sbjct: 462 TGLCNAERLDAAAELVAEMLHRDCPPNVVTFNV---LVNFFCQKGFLDEAIELVEQMMEH 518
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC+ L Y K+ + +A +L+ + S G+ DV + ++I + A
Sbjct: 519 GCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEA 578
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+F + +D + K +N I+
Sbjct: 579 IQMF------------------------------------HLAQDIGMRPKALVYNKILL 602
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
CK +++A L M+ PN+ TY+ LI G
Sbjct: 603 GLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEG 638
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 143/369 (38%), Gaps = 62/369 (16%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+ + L+G C + D E++ M PNE +F L + G+ E+ +
Sbjct: 244 QPDTVSYTTLLKGLCAS-KRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 302
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
++ M E ++ + +I+ K G ++ A + + NM + +T Y
Sbjct: 303 QVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFL------NNMGSYGCNPDTISYT 356
Query: 335 EVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
V+KG + L+ E + P+ + + I GL ++A +++
Sbjct: 357 TVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNT-----FICILCQKGLIEQAIMLIE 411
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M GC+VG V Y+AL+
Sbjct: 412 QMQEHGCTVG-----------------------------------VVTYNALVNGFCVQG 436
Query: 453 DFQSAFSLFRDM--REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV-EDPRVEVKT 509
SA LFR M + I +Y T++TGL R + A + E++ D V T
Sbjct: 437 HIDSALELFRSMPCKPNTI-----TYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVT 491
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+N +++ FC+ G L++A + +M+ PN TY +L +G L + H
Sbjct: 492 --FNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHG 549
Query: 570 -IKRKISTD 577
+ + +S D
Sbjct: 550 LVSKGVSPD 558
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 154/392 (39%), Gaps = 49/392 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+ N + G C Q+V A+ +++ G P+ ++ LA +G ++
Sbjct: 77 RPSCCTYNTLISGLCKQ-QNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 135
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
EL M+ G + +V Y++LI G K E A + + S F + TY
Sbjct: 136 ELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELL------ETLVSSGFVPDVVTYT 189
Query: 335 EVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+V G + G + ++ + + PS I ++ G D+AH I
Sbjct: 190 IIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITY-----TALMEGLCRTGRVDEAHHIFK 244
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV-------------------------- 426
EM + C+ YV + YCK RT EA ++V
Sbjct: 245 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLD 304
Query: 427 ------MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
D++ G ++ Y+ +++ AF M A SY I+
Sbjct: 305 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 364
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL + +P+ LD++++ + +N+++ FCK R +DA L+ MI
Sbjct: 365 DGLFKASKPKEARQVLDQMIQ-AGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 423
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+P++ TY +LI+G + + HE+ R
Sbjct: 424 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLR 455
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 96/497 (19%), Positives = 200/497 (40%), Gaps = 50/497 (10%)
Query: 82 NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKN--PKL 139
+ TD+A + + + P NS+ + L +RA + + + E+N P
Sbjct: 24 SKTDKASEMLHEMVDRGVTPDTVTFNSI---MDGLCKAGKFERAHSLLAVMAERNCRPSC 80
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD-ICRKNSNFVAFL 198
+ T+ + L +N + A LV F + F+P + L D +C++ AF
Sbjct: 81 CTYNTLISGLCKQQNVDRAK---TLVD-EFVSSGFVPDVVTYSILADGLCKRGRIDEAFE 136
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
V E + + PN+ N ++G C ++ A +++ET+ G P+ +
Sbjct: 137 LVKEM--------SGNGCTPNLVTYNTLIDGLCKASKT-EKAYELLETLVSSGFVPDVVT 187
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLE---------- 308
+ + +G +K +++ M + G + ++ Y++L+ G + G ++
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247
Query: 309 ----SASRTILLCLGGGNMEQSDFSK--------------ETYCEVVKGFLQNGNVKGLA 350
+A + L G + S + + Y ++ G+ + G + +
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIP 307
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
N+ + + G V + ++ G D+A L+ M++ GC + Y +
Sbjct: 308 NVF---EDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 364
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
K + EA Q++ + +G+ D Y+ L+ + F A + ++M +A +
Sbjct: 365 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVD 424
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+Y T+++GL + +R + E++ + V +N+II CK G L+ A
Sbjct: 425 PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALL 484
Query: 531 TLRRMIFLQFEPNDQTY 547
+ M E N TY
Sbjct: 485 LMDHMTGHGVEANTVTY 501
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 105/482 (21%), Positives = 190/482 (39%), Gaps = 36/482 (7%)
Query: 83 NTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDF 142
N D A ++ P VT S++A L + AF +V + N +
Sbjct: 95 NVDRAKTLVDEFVSSGFVPD-VVTYSILA--DGLCKRGRIDEAF-ELVKEMSGNGCTPNL 150
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE 202
T +TL+ + A+ A+ L++ + + F+P + +VD K LK+ E
Sbjct: 151 VTYNTLIDGLCKASKTEKAYELLETLVSSG-FVPDVVTYTIIVDGLCKEGRLDKALKMVE 209
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
+ P++ A +EG C V +A + + M + + L
Sbjct: 210 GMLKRGC-------TPSVITYTALMEGLCR-TGRVDEAHHIFKEMV-----SKDCTADAL 256
Query: 263 AYLYALKGL--QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCL 318
AY+ + G + E + +++ + + Y++L+ GY K G L+ + C
Sbjct: 257 AYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACR 316
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
G + +TY V+ G ++G V + + + +G V D II
Sbjct: 317 G------CVPNIKTYNIVMDGLCKHGKVDEAFPFL---ESMHSAGCVPDVVSYNIIIDGL 367
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
+A +LD+M G Y + +CKE R +A ++ ++ +G+ D
Sbjct: 368 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDN 427
Query: 439 GNYDALIEASITSQDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
Y+ LI + A+ L +M R + +Y TI+ L + + +D
Sbjct: 428 VTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMD 487
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ VE T +N I CK GRL++A L M L+ ++ +Y ++I G A
Sbjct: 488 HMTGHG-VEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKA 543
Query: 558 EQ 559
EQ
Sbjct: 544 EQ 545
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ CK +T +A++++ ++ G+ D ++++++ + F+ A SL M E
Sbjct: 17 IDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNC 76
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-EVKTHDWNSIIHAFCKAGRLEDA 528
+Y T+++GL + + +DE V V +V T ++ + CK GR+++A
Sbjct: 77 RPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVT--YSILADGLCKRGRIDEA 134
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
++ M PN TY +LI+G A +
Sbjct: 135 FELVKEMSGNGCTPNLVTYNTLIDGLCKASK 165
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 73/206 (35%), Gaps = 38/206 (18%)
Query: 384 SDKAHSILDEMNACG-----------------------------------CSVGLGVYVP 408
+DKA +L EM G C Y
Sbjct: 26 TDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNT 85
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ CK+ A LV + SSG DV Y L + AF L ++M
Sbjct: 86 LISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNG 145
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-EVKTHDWNSIIHAFCKAGRLED 527
+Y T++ GL + + E L+ +V V +V T + I+ CK GRL+
Sbjct: 146 CTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT--YTIIVDGLCKEGRLDK 203
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLING 553
A + + M+ P+ TY +L+ G
Sbjct: 204 ALKMVEGMLKRGCTPSVITYTALMEG 229
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 147/331 (44%), Gaps = 18/331 (5%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y++L++GY + G+L++A R I G+M + TY +++ G V +L+
Sbjct: 114 YNTLVAGYCRYGHLDAARRLI------GSMPVAP-DAYTYTPLIRVLCDRGRVADALSLL 166
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ + VV +V + C N G ++A ++LDEM A GC+ + Y +
Sbjct: 167 DDMLRRGCQPNVVTYTVLLE--AMCRNSGF-EQAMAVLDEMRAKGCTPNIVTYNVIINGM 223
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C+E R +A +L+ + S G Q D +Y L++ S+ + LF +M E +
Sbjct: 224 CREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNE 283
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
++ ++ E L+++ E T N +I++ CK GR++DA + L
Sbjct: 284 VTFDMLIRFFCRGGMVERAIQVLEQMTEH-GCATNTTLCNIVINSICKQGRVDDAFKLLN 342
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
M P+ +Y +++ G AE++ + +E+ R + + F + F+
Sbjct: 343 DMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNE--VTF-----NTFI 395
Query: 594 YALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
L + G + + ++E+ E V Y
Sbjct: 396 CILCQKGLIEQAIMLIEQMSEHGCTVGVVTY 426
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 164/383 (42%), Gaps = 28/383 (7%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
V+DA +++ M G +PN ++ L + G ++ + L+ M G + +V Y+
Sbjct: 159 VADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDE-MRAKGCTPNIVTYN 217
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLI 353
+I+G + G ++ A R +L + F +T Y ++KG + + L
Sbjct: 218 VIINGMCREGRVDDA-RELL-----NRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELF 271
Query: 354 IE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
E + P+ + D + F G+ ++A +L++M GC+ + +
Sbjct: 272 AEMMEKNCMPNEVTFDMLIRFFCRG-----GMVERAIQVLEQMTEHGCATNTTLCNIVIN 326
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
+ CK+ R +A +L+ D+ S G D +Y +++ ++ + A L +M
Sbjct: 327 SICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPP 386
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
+ ++ T + L + E A L E + + V +N++++ FC G ++ A
Sbjct: 387 NEVTFNTFICILCQKGLIE-QAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALEL 445
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDA 591
R M +PN TY +L+ G AE+ + E+ R D + + LV
Sbjct: 446 FRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRG---DCPPNVVTFNVLVSF 499
Query: 592 FLYALVKGGFFDAVMQVVEKSQE 614
F + GF + +++VE+ E
Sbjct: 500 F----CQKGFLEEAIELVEQMME 518
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 156/401 (38%), Gaps = 56/401 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ LE C A V++ M G PN ++ + +G +
Sbjct: 175 QPNVVTYTVLLEAMCRN-SGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 233
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-TYCE 335
EL + + +GF V Y++L+ G + L ME++ E T+
Sbjct: 234 ELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEE-----LFAEMMEKNCMPNEVTFDM 288
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+++ F + G V+ ++ +++ G + ++ +I++ G D A +L++M
Sbjct: 289 LIRFFCRGGMVERAIQVL---EQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMG 345
Query: 396 ACGCSVGLGVYVPTLKAYCKEHR-----------------------------------TA 420
+ GC+ Y LK C+ R
Sbjct: 346 SYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIE 405
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM--REARIYDLKGSYLT 478
+A L+ +S G + V Y+AL+ SA LFR M + I +Y T
Sbjct: 406 QAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTI-----TYTT 460
Query: 479 IMTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++TGL R + A + E++ D V T +N ++ FC+ G LE+A + +M+
Sbjct: 461 LLTGLCNAERLDGAAELVAEMLRGDCPPNVVT--FNVLVSFFCQKGFLEEAIELVEQMME 518
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTD 577
PN TY +L++G L + H + + +S D
Sbjct: 519 HGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPD 559
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 134/336 (39%), Gaps = 47/336 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ + L+G C + DA++++ M PNE +F + KGL E+ +
Sbjct: 351 PDTISYTTVLKGLCRA-ERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 409
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M+E G + +V Y++L++G+ G+++SA + TY ++
Sbjct: 410 LIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELF-------RSMPCKPNTITYTTLL 462
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + G A L+ E + + VV +V ++S G ++A ++++M
Sbjct: 463 TGLCNAERLDGAAELVAEMLRGDCPPNVVTFNV---LVSFFCQKGFLEEAIELVEQMMEH 519
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC+ L Y L K+ + +A +L+ + S G+ DV + ++I + A
Sbjct: 520 GCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEA 579
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
LF VV+D + K +N I+
Sbjct: 580 VQLF------------------------------------HVVQDIGMRPKAVVYNKILL 603
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
CK +++A M+ PN+ TY+ LI G
Sbjct: 604 GLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEG 639
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 162/379 (42%), Gaps = 29/379 (7%)
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFM--------KPNIYACNAALEGCCYGLQSVS 238
+C + + + F C R LD + F+ K +Y N+ + G C L ++S
Sbjct: 397 LCANDVTYSILIDSF--CRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHC-KLGNLS 453
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
A + M G++P S+ L Y KG + L M G + +++LI
Sbjct: 454 AAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLI 513
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-TYCEVVKGFLQNGN-VKGLANLIIEA 356
S + + A R L +EQ+ E TY +++G + GN VK L
Sbjct: 514 SALFRANRMTDAFR-----LFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMV 568
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
QK G+V D +IS+ + G +A +D+++ + Y L YCKE
Sbjct: 569 QK----GLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKE 624
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R +A + ++ G+ +D+ Y LI+ +I QD + F L ++M + R+ K Y
Sbjct: 625 GRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIY 684
Query: 477 LTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+++ G + + D ++++ P + + ++I+ CKAG ++ A+ +
Sbjct: 685 TSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVT----YTTLINELCKAGLMDKAELLWK 740
Query: 534 RMIFLQFEPNDQTYLSLIN 552
M+ PN TY ++
Sbjct: 741 EMLVSNSTPNHVTYCCFLD 759
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 141/344 (40%), Gaps = 15/344 (4%)
Query: 225 AALEGCCYGLQ---SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESL 281
AAL GL+ V DA ++ + +G P+ + L G ++ L
Sbjct: 332 AALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKE 391
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M E G + V YS LI + + G L++A LG M + Y ++ G
Sbjct: 392 MGEKGLCANDVTYSILIDSFCRRGKLDTAIHF----LGKMIMAGIKITVYPYNSLINGHC 447
Query: 342 QNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
+ GN+ + E + L+P+ VV + +IS N G +A + EM G
Sbjct: 448 KLGNLSAAVSFFDEMIDKGLKPT--VVSYT---SLISGYCNKGKLHEAFRLYHEMTGKGI 502
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
+ + + A + +R +A +L ++ + + Y+ +IE + AF
Sbjct: 503 APNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFE 562
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAF 519
L M + + +Y +++ L R F+D++ + ++ +++++H +
Sbjct: 563 LLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHRE-HFKLNEMCYSALLHGY 621
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
CK GRL DA R M+ + + Y LI+G + + +V
Sbjct: 622 CKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAV 665
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 120/301 (39%), Gaps = 36/301 (11%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
G + Y ++I + +L N A I ME SD + Y ++ G +N
Sbjct: 223 GIRPDIYIYVAVIRSFCELKNFAKAKEMI------QRMESSDLNVVVYNVLIHGLCKNKR 276
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC-VNLGLS-----DKAHSILDEMNACGC 399
V + +E ++ + + ++ C + LGL + ++DEM G
Sbjct: 277 V---------WEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELG- 326
Query: 400 SVGLGVYVPTLKAYC-------KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+VPT A ++ + +A LV + G + Y+ALI +
Sbjct: 327 ------FVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDG 380
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
F A LF++M E + +Y ++ + + FL +++ +++ + +
Sbjct: 381 KFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIM-AGIKITVYPY 439
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
NS+I+ CK G L A MI +P +Y SLI+GY + ++HE+
Sbjct: 440 NSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG 499
Query: 573 K 573
K
Sbjct: 500 K 500
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 141/359 (39%), Gaps = 52/359 (14%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ AC A + GCC G V++A +V + M +LG+ PNE ++ L + Y G +EK L
Sbjct: 37 DVTACTALVNGCCKG-GDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFAL 95
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M G + Y+ LI + + G E A +
Sbjct: 96 FEEMRRGGVEPNLYTYNCLIGEWCRTGEFERA---------------------------R 128
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
V+G+ ++ L I C + L D A +LD M G
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTL--------------IAGLCRHGKLWDAAK-LLDMMRTEG 173
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ + + Y K + + A + ++G Q Y+ LI ++D A
Sbjct: 174 TRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRAN 233
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLM-ENHRP---ELMAAFLDEVVEDPRVEVKTHDWNS 514
DM+E + K +Y ++ ENH E++A +E +EV H +
Sbjct: 234 RALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAG-----MEKAGLEVDAHTYGV 288
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++ A C G ++DA++ + M EP++ Y +I GY + L + E+++K
Sbjct: 289 LVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQK 347
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 135/353 (38%), Gaps = 81/353 (22%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PNIY N + C + V AE ++ M V GV P+ ++ L LY KGL
Sbjct: 194 DGVVPNIYVYNCLIHACSKS-RDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHY 252
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ + ++ M G + +V Y+SLI G+ K G + A R G ++ + + TY
Sbjct: 253 EALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMF------GEIKDAIPNHVTY 306
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G+ + AN EA +L +
Sbjct: 307 TTLIDGYCK-------ANEFEEALRLR-------------------------------EM 328
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M A G G+ Y L+ C + R +A +L+ ++S +Q D + LI A D
Sbjct: 329 MVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGD 388
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
SA M EA GL N + +
Sbjct: 389 LNSALKFKTKMLEA--------------GLTPN----------------------SFTYK 412
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
++IH FCK LE AK L M+ F PN +TY +++ Y + +VL +
Sbjct: 413 ALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLAL 465
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 348 GLANLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
G+ +++ + +++ G+V + V +I AC ++A IL+EM G + Y
Sbjct: 179 GITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTY 238
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ YCK+ EA + + G+ LD+ +Y++LI + A +F ++++
Sbjct: 239 NTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKD 298
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
A + +Y T++ G + + E A L E++ + +NSI+ C GR+
Sbjct: 299 AIPNHV--TYTTLIDGYCKANEFE-EALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIR 355
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGY 554
DA + L M + + + T +LIN Y
Sbjct: 356 DANKLLHEMSERKVQADSVTCNTLINAY 383
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 166/418 (39%), Gaps = 33/418 (7%)
Query: 61 QTLTQDNITSLETNLH------KSLLTNN-TDEAWKSFKSLTANSLFPSKPVTNSLIAHL 113
Q Q ++ +L+ +LH SLL + T WK +K + + + P+ V N LI
Sbjct: 151 QVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHAC 210
Query: 114 SSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRY 173
S +D ++RA ++ +E + D T +TL+ A ++ M +
Sbjct: 211 SKSRD---VERA-EFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMERE-- 264
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLK--VFEECCRIALDENLDFMKPNIYACNAALEGCC 231
G +DI NS F K E R+ E D + PN ++G C
Sbjct: 265 --------GINLDIVSYNSLIYGFCKEGKMREAMRM-FGEIKDAI-PNHVTYTTLIDGYC 314
Query: 232 YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQM 291
+A ++ E M G+ P ++ + G +L M+E +
Sbjct: 315 KA-NEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADS 373
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLAN 351
V ++LI+ Y K+G+L SA + L G + + F TY ++ GF + ++
Sbjct: 374 VTCNTLINAYCKIGDLNSALKFKTKMLEAG-LTPNSF---TYKALIHGFCKTSELESAKE 429
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
L+ + +G + I+ + +D ++ DE + G + + +Y ++
Sbjct: 430 LLF---GMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIR 486
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
CK R A +L+ + G+ D Y +L + S + +A + +M R+
Sbjct: 487 RLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRL 544
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 146/338 (43%), Gaps = 13/338 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++ C + + +A ++++MS G++PN S+ + +G ++ E
Sbjct: 247 PNVVTYNTLIDAYC-KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWE 305
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M GF+ V Y++L++GY K GN A + M ++ S TY
Sbjct: 306 ILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQA------LVIHAEMVRNGVSPSVVTYTA 359
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ + N+ ++ G+ + +I GL ++A+ IL+EM
Sbjct: 360 LINSMCKARNLNRAMEFF---DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 416
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G S + Y + +C R EA +V ++ GL DV +Y +I +
Sbjct: 417 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 476
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
AF + ++M E + +Y +++ GL E R A L + + D + + ++
Sbjct: 477 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT-EACDLSQEMLDMGLPPDEFTYTTL 535
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
I+A+C G L A MI F P+ TY LING
Sbjct: 536 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLING 573
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 154/364 (42%), Gaps = 21/364 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIET---MSVLGVRPNESSFGFLAYLYALKGLQ 272
+ PN+Y N + G C SV + +K + M G PN ++ L Y G
Sbjct: 210 VSPNVYTYNILIRGFC----SVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRI 265
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
++ L M+ G ++ Y+ +I+G + G+++ A + M F+ +
Sbjct: 266 DEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEIL------EEMGYKGFTPDE 319
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY ++ G+ + GN L+I A+ + +G+ +I++ ++A
Sbjct: 320 VTYNTLLNGYCKEGNFH--QALVIHAEMVR-NGVSPSVVTYTALINSMCKARNLNRAMEF 376
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
D+M G Y + + ++ EA +++ +++ SG V Y+A I
Sbjct: 377 FDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCV 436
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKT 509
+ + A + ++M E + SY TI++G + EL AF + + + + V
Sbjct: 437 LERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCR--KGELDRAFQMKQEMVEKGVSPDA 494
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
++S+I C+ RL +A + M+ + P++ TY +LIN Y L + E
Sbjct: 495 VTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDE 554
Query: 570 IKRK 573
+ K
Sbjct: 555 MIHK 558
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 146/395 (36%), Gaps = 64/395 (16%)
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG 233
F P E+ L++ K NF L + E R + + P++ A + C
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVR-------NGVSPSVVTYTALINSMCKA 367
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
++++ A + + M + G+RPNE ++ L ++ +GL + + + M E GFS +V
Sbjct: 368 -RNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVT 426
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y++ I G+ L +E A G +Q KGLA +
Sbjct: 427 YNAFIHGHCVLERMEEA---------------------------LGVVQEMVEKGLAPDV 459
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ IIS G D+A + EM G S Y ++
Sbjct: 460 VSYST---------------IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 504
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C+ R EA L ++ GL D Y LI A D A L +M
Sbjct: 505 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 564
Query: 474 GSYLTIMTGLMENHRPELMAAFL----------DEVVEDPRVE----VKTHDWNSIIHAF 519
+Y ++ GL + R L +V D +E ++ ++I F
Sbjct: 565 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGF 624
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
C G + +A R M+ +P + Y +I+G+
Sbjct: 625 CMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGH 659
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 119/295 (40%), Gaps = 15/295 (5%)
Query: 332 TYCEVVKGFLQNGNV-KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY +++GF G + KGL ++E +G + + +I A +G D+A +
Sbjct: 216 TYNILIRGFCSVGELQKGLGCF----GEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 271
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L M++ G L Y + C+E EA +++ ++ G D Y+ L+
Sbjct: 272 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 331
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKT 509
+F A + +M + +Y ++ + + F D++ + R +T
Sbjct: 332 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 391
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+ ++I F + G L +A R L M F P+ TY + I+G+ E+ L + E
Sbjct: 392 --YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 449
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ +KG+ + + + G D Q+ ++ E V D Y
Sbjct: 450 MV-------EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 497
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 84/195 (43%), Gaps = 3/195 (1%)
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE--ATQLVMDISSSGLQLD 437
+L + D+A + ++ + G G+ Y L A + + + A ++ ++ S + +
Sbjct: 154 HLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPN 213
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
V Y+ LI + + Q F +M +Y T++ + R + L
Sbjct: 214 VYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLK 273
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ ++ +N II+ C+ G +++A L M + F P++ TY +L+NGY
Sbjct: 274 SM-SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 332
Query: 558 EQYFSVLMMWHEIKR 572
+ L++ E+ R
Sbjct: 333 GNFHQALVIHAEMVR 347
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 164/347 (47%), Gaps = 34/347 (9%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ N + G C +++A K++ M + G P++ ++G+L + GL KI
Sbjct: 285 PDAETFNDVILGLC-KFDRINEAAKMVNRMLIRGFAPDDITYGYL-----MNGLC-KIGR 337
Query: 278 LESLMNEFGF--SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+++ + F ++V +++LI G+V G L+ A + +L + D TY
Sbjct: 338 VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDA-KAVLSDMVTSYGIVPDVC--TYNS 394
Query: 336 VVKGFLQNGNVKGLANLIIEAQK---LEPS----GIVVDRSVGFGIISACVNLGLSDKAH 388
++ G+ + G V GLA ++ + +P+ I+VD GF LG D+A+
Sbjct: 395 LIYGYWKEGLV-GLALEVLHDMRNKGCKPNVYSYTILVD---GF------CKLGKIDEAY 444
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
++L+EM+A G + + A+CKEHR EA ++ ++ G + DV +++LI
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV--EDPRVE 506
+ + A L RDM + +Y T++ + + ++E+V P E
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ +NS+I C+AG ++ A+ +M+ P++ + LING
Sbjct: 565 IT---YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 135/325 (41%), Gaps = 14/325 (4%)
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIALDENLDF----MKPNIYACNAALEGCCYGLQSV 237
G + D+C NS + K E +AL+ D KPN+Y+ ++G C L +
Sbjct: 384 GIVPDVCTYNSLIYGYWK--EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC-KLGKI 440
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+A V+ MS G++PN F L + + + VE+ M G + ++SL
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
ISG ++ ++ A + + G + + TY ++ FL+ G +K L+ E
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANT----VTYNTLINAFLRRGEIKEARKLVNE-- 554
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ G +D +I G DKA S+ ++M G + + C+
Sbjct: 555 -MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
EA + ++ G D+ +++LI + + ++FR ++ I ++
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 478 TIMTGLMENHRPELMAAFLDEVVED 502
T+M+ L + LDE +ED
Sbjct: 674 TLMSWLCKGGFVYDACLLLDEGIED 698
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 5/226 (2%)
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
S + Y ++ NG K + L+I+ ++ GIV S+ I+ G +
Sbjct: 110 SFDVYQVLIGKLGANGEFKTIDRLLIQ---MKDEGIVFKESLFISIMRDYDKAGFPGQTT 166
Query: 389 SILDEM-NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
++ EM N C Y L+ + A + D+ S + + + +++A
Sbjct: 167 RLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKA 226
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ SA SL RDM + Y T++ L + +R L+E+ V
Sbjct: 227 FCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP- 285
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N +I CK R+ +A + + RM+ F P+D TY L+NG
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 157/345 (45%), Gaps = 10/345 (2%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P++ N ++ C Q + A ++E M G+ P+E +F + + +G +
Sbjct: 191 IRPDVSTFNILIKALCRAHQ-IRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGA 249
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF-SKETYC 334
+ ++ M E G V + L++G+ K G +E A R I ++ + F K T+
Sbjct: 250 MRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFI----EEMSLREGFFPDKYTFN 305
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+V G + G+VK ++ + G D +IS LG D+A +L++M
Sbjct: 306 MLVNGLSKTGHVKHALEVM---DMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQM 362
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
CS Y + CKE++ EAT+L + ++ G+ DV Y++LI+ S++
Sbjct: 363 IERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNH 422
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A L+++M+ + + +Y ++ L + + L E +E +N+
Sbjct: 423 TVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKE-MEVSGCARNVITYNT 481
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+I FCK R+ +A+ +M N TY +LI+G +E+
Sbjct: 482 LIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSER 526
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 148/341 (43%), Gaps = 15/341 (4%)
Query: 237 VSDAEKVIETMSVL-GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+ +A + IE MS+ G P++ +F L + G + +E+ +M GF + Y+
Sbjct: 281 IEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYN 340
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLI 353
SLISG KLG ++ A + + M + D S T Y ++ + V+ L
Sbjct: 341 SLISGLCKLGEVDEAVKVL------NQMIERDCSPNTVTYNTIISTLCKENQVEEATKL- 393
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
A L GI+ D +I A + EM GC Y + +
Sbjct: 394 --ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSL 451
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C + EA L+ ++ SG +V Y+ LI+ ++ A +F M +
Sbjct: 452 CFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNS 511
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVV-EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+Y T++ GL ++ R E + +D+++ E R + T +NS++ FCKAG ++ A +
Sbjct: 512 VTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFT--YNSLLTYFCKAGDIKKAADIV 569
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ M EP+ TY +LI G A + + + I+ K
Sbjct: 570 QTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMK 610
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 130/312 (41%), Gaps = 20/312 (6%)
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD 239
+ + +C++N EE ++AL + P++ N+ ++G C ++ +
Sbjct: 374 YNTIISTLCKENQ--------VEEATKLALVLTGKGILPDVCTYNSLIQGLCLS-RNHTV 424
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A ++ + M G P+E ++ L +G ++ + L M G + ++ Y++LI
Sbjct: 425 AMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLID 484
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
G+ K + A ME S+ TY ++ G ++ V+ + L+
Sbjct: 485 GFCKNKRIAEAEEIF------DQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLM---D 535
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
++ G+ D+ +++ G KA I+ M + GC + Y + CK
Sbjct: 536 QMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAG 595
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
R AT+L+ I G+ L Y+ +I+A + + A LFR+M E +Y
Sbjct: 596 RVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYK 655
Query: 478 TIMTGLMENHRP 489
+ GL + P
Sbjct: 656 IVFRGLCQGGGP 667
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 143/411 (34%), Gaps = 78/411 (18%)
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG 233
F P + LV+ K + L+V + R D P+IY N+ + G C
Sbjct: 297 FFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD-------PDIYTYNSLISGLC-K 348
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
L V +A KV+ M PN ++ + + E+ +L ++ G +
Sbjct: 349 LGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCT 408
Query: 294 YSSLISGYVKLGNLESA-----------------SRTIL---LCLGGGNMEQSDFSKE-- 331
Y+SLI G N A + +L LC G E + KE
Sbjct: 409 YNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEME 468
Query: 332 ---------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
TY ++ GF +N + + ++E G+ + +I
Sbjct: 469 VSGCARNVITYNTLIDGFCKNKRIAEAEEIF---DQMELQGVSRNSVTYNTLIDGLCKSE 525
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
++A ++D+M G Y L +CK +A +V ++S G + D+ Y
Sbjct: 526 RVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYG 585
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
LI + ++A L R ++ +KG LT
Sbjct: 586 TLIAGLCKAGRVEAATKLLRTIQ------MKGINLT------------------------ 615
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
H +N +I A + R ++A R R MI P+ TY + G
Sbjct: 616 ------PHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRG 660
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 151/345 (43%), Gaps = 13/345 (3%)
Query: 238 SDAEKVIETMSVLGVRPNESSF-GFLAYLYALKGLQEKIVELESLMNEFGFSS-QMVFYS 295
D E+++ETM+ G++PN S+ G L L L+ E + +++ G S+ +V YS
Sbjct: 27 GDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYS 86
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
+L+SGY K G +E + + + G + + + K ++ L +I
Sbjct: 87 TLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRA 146
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
P+ I + +IS C + A S+L M A G + Y + CK
Sbjct: 147 G--CCPTLITFNT-----LISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCK 199
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
R EA QL+ + +SG DV Y + + S +A + MR++ +
Sbjct: 200 AGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVT 259
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
Y TI+ GL ++ + + ++++ + +++++ CK GR ++A+ + M
Sbjct: 260 YNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM 319
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQK 580
P+ TY SL+NG A + + E R+++ +G K
Sbjct: 320 ARAGCRPDVVTYSSLVNGLCKAGKIEEAV----EAVREMAMEGCK 360
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 140/339 (41%), Gaps = 44/339 (12%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P + N + GCC +++ A+ +++TM+ GV+ + ++ L G ++ +
Sbjct: 150 PTLITFNTLISGCCR-EKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQ 208
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
L M G + +V YSS + G K G + +A + + M SD TY
Sbjct: 209 LLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLE------QMRDSDHDPNVVTYNT 262
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEM 394
++ G ++G + ++ + + G+ V VG+ ++ LG + +A S+++ M
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDGCGLNV---VGYSTVVDGLCKLGRTQEARSVMEAM 319
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
GC + Y + CK + EA + V +++ G + + Y +L+ +
Sbjct: 320 ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRL 379
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A + +M +H P P V +N+
Sbjct: 380 AEAERMVEEMSSGGG--------------GGDHCP-------------PSVST----YNA 408
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+I CKAGR++DA + +RM +P+ +Y +++ G
Sbjct: 409 LIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEG 447
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 10/233 (4%)
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M+ GC + + + K+ R + +L+ +++ G+Q +V +Y+ L+E +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 454 FQSAFSLFRDM--REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ A L RDM R R +Y T+++G + + E L EV+ +
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRG-LRPDALM 119
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+ ++ + CK+ RL +A L MI P T+ +LI+G + L M +
Sbjct: 120 YTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKN----LEMADSLL 175
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ ++ G K +N + L K G Q++E+ + D Y
Sbjct: 176 QTMAASGVKADVVTYN---TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAY 225
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 14/187 (7%)
Query: 191 NSNFVAFLKVFEECCRIA-LDENLDFMKP---------NIYACNAALEGCCYGLQSVSDA 240
+ N V + + + C+ +D L+ M+ N+ + ++G C L +A
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCK-LGRTQEA 312
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
V+E M+ G RP+ ++ L G E+ VE M G V Y SL+ G
Sbjct: 313 RSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG 372
Query: 301 YVKLGNLESASRTI-LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQ 357
G L A R + + GGG + S TY ++ G + G + + +Q
Sbjct: 373 LCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQ 432
Query: 358 KLEPSGI 364
+P G+
Sbjct: 433 GCDPDGV 439
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 152/371 (40%), Gaps = 42/371 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ +CN+ L ++ A V E M LG+ P+ S+ + Y +G ++
Sbjct: 219 PSLRSCNSLLSNLVQNGEAFK-ALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFN 277
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M +V Y+SLI GYV LG++ A + + L G E S TY ++
Sbjct: 278 FVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENS----RTYTLLI 333
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
KG+ + G ++ LI + + VD V +I A G D A I D M
Sbjct: 334 KGYCKRGQMEQAEKLI---GCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKV 390
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + + + YCK +A ++++ + L+ D Y+ L++ +DF A
Sbjct: 391 GLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKA 450
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPE-------LM---AAFLDEV----VEDP 503
F L +M + +Y T++ L E LM +EV + D
Sbjct: 451 FKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDA 510
Query: 504 RVEVKTHD--------------------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+V T D +N++I FCK +L A+ +M L F P+
Sbjct: 511 FFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPD 570
Query: 544 DQTYLSLINGY 554
+ TY +LI+GY
Sbjct: 571 EITYRTLIDGY 581
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 118/528 (22%), Positives = 202/528 (38%), Gaps = 101/528 (19%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV--F 201
T +TLL ++ + A + M K R P E+ L+D AF KV F
Sbjct: 468 TYNTLLKNLFHVGHVEHALHIWNLMHK-RGVAPNEVTYCTLLD---------AFFKVGTF 517
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
+ I D +I N + G C ++ + A+++ M LG P+E ++
Sbjct: 518 DRAMMIWKDALSKGFTKSITLYNTMICGFC-KMEKLVQAQEIFLKMKELGFPPDEITYRT 576
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L Y G + ++L+ + G SS Y+SLI+G + L+ + +
Sbjct: 577 LIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLL------A 630
Query: 322 NMEQSDFSKE--TYCEVVKGFLQNGNV------------KGLA-NLIIEAQ--------- 357
M+ + S TY ++ G+ G + KG+A N+II ++
Sbjct: 631 EMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHG 690
Query: 358 KLEPSGIVVDRSVGFGIISA---CVNLGLSDKAH----SILDEMNACGCSVGLG---VYV 407
K++ + +++ + I+A V L SD H I+D S+ + VY
Sbjct: 691 KIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYN 750
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ CK + +++ D+ G D Y +LI A AF L DM
Sbjct: 751 IAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDM--- 807
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
I GL+ P + V +N++I+ CK+G L+
Sbjct: 808 -----------INAGLV------------------PNIVV----YNALINGLCKSGNLDR 834
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN 587
A+R ++ P TY +LI+GY + L E+K K+ +G ++
Sbjct: 835 ARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEAL----ELKDKMREEGICPSSITYS 890
Query: 588 LVDAFLYALVKG----GFFDAVMQVVEKSQEMKVFVD----KWKYKQA 627
+ LY K G + +M+ + S M V KW+ KQ+
Sbjct: 891 TLIHGLYMEGKSEQSVGLLNEMMKAGKGSSVMDPLVARAYVKWRDKQS 938
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 132/336 (39%), Gaps = 37/336 (11%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AEK+I M + +E +G L + Y G + + + M + G V +SLI+
Sbjct: 345 AEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLIN 404
Query: 300 GYVKLGNLESASRTILL--------------CLGGGNMEQSDFSKE-------------- 331
GY KLG++ A+ ++ L G +Q DF K
Sbjct: 405 GYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNF 464
Query: 332 ---TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY ++K G+V+ ++ + G+ + ++ A +G D+A
Sbjct: 465 TVVTYNTLLKNLFHVGHVEHALHI---WNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAM 521
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
I + + G + + +Y + +CK + +A ++ + + G D Y LI+
Sbjct: 522 MIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGY 581
Query: 449 ITSQDFQSAFSLFRDMREAR-IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ A L +DM E I Y +++TG+ + + + L E +++ +
Sbjct: 582 CKVGNLVEALKL-KDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAE-MKNRELSP 639
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+ S+I +C G ++ A +MI PN
Sbjct: 640 NVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPN 675
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 158/376 (42%), Gaps = 36/376 (9%)
Query: 195 VAFLKVFE-ECCRIALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
+A++K E C A D+ K ++ +CN L + D E V + M +
Sbjct: 138 LAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKE-NKIGDVEYVYKEMIKRRI 196
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
N ++F G K + M +G S +V Y++L+ GY K G+
Sbjct: 197 HTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGS------ 250
Query: 313 TILLCLGGGNMEQSD-FSKE-----------TYCEVVKGFLQNGNVKGLANLIIEAQK-- 358
G M +++ F KE T+ ++ GF ++ NV E QK
Sbjct: 251 -------AGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQG 303
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
L+P+ + + +I+ N G ++A + D+M G + Y + +CK+
Sbjct: 304 LKPNIVTYN-----SLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
EAT++ D+S L +V ++ +I+A + FSL M + I +Y
Sbjct: 359 MKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNC 418
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ GL + L+E +E+ ++ +N +I CK + +A++ L M L
Sbjct: 419 LIAGLCRKQDLQAAKELLNE-MENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNL 477
Query: 539 QFEPNDQTYLSLINGY 554
+PN TY +L++GY
Sbjct: 478 GLKPNHVTYNTLMDGY 493
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 143/351 (40%), Gaps = 36/351 (10%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+ N + G C ++ AE IE M G+ PN ++ L Y +G K+ +
Sbjct: 199 NLNTFNIFINGLCRA-GKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKA 257
Query: 279 ESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
E+ M E V +++LI G+ K N+ +A + M++ TY
Sbjct: 258 EAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAF------EEMQKQGLKPNIVTY 311
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI----------ISACVNLGL 383
++ G NG KLE + + D+ VG G+ I+ +
Sbjct: 312 NSLINGLCNNG-------------KLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
+A + D+++ + + + AYCKE E L + G+ +V Y+
Sbjct: 359 MKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNC 418
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI QD Q+A L +M + +Y ++ GL +N + L+E+ +
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMF-NL 477
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++ +N+++ +C G+L+ A RM + +PN TY LI GY
Sbjct: 478 GLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGY 528
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 140/349 (40%), Gaps = 16/349 (4%)
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVA 196
P ++ + T+ +A A A +K M N+ P E+ L+D K+ N A
Sbjct: 233 PNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK-ICPNEVTFNTLIDGFCKDENVAA 291
Query: 197 FLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
K FEE + L KPNI N+ + G C + +A + + M LG++PN
Sbjct: 292 AKKAFEEMQKQGL-------KPNIVTYNSLINGLCNN-GKLEEAIDLWDKMVGLGLKPNI 343
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
++ L + K + ++ ++ +++ ++ ++++I Y K G +E
Sbjct: 344 VTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSS 403
Query: 317 CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
L G + TY ++ G + +++ L+ E + G VV ++ +I
Sbjct: 404 MLDEGILPNVS----TYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI---LID 456
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
S A +L+EM G Y + YC E + A + + Q
Sbjct: 457 GLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQP 516
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+V Y+ LI+ ++A L +M E + + +Y + ++E
Sbjct: 517 NVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLE 565
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 132/337 (39%), Gaps = 58/337 (17%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN N ++G C ++V+ A+K E M G++PN ++ L G E+ ++
Sbjct: 271 PNEVTFNTLIDGFCKD-ENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAID 329
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE------ 331
L M G +V Y++LI+G+ K ++ A++ D SK+
Sbjct: 330 LWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVF-----------DDVSKQELVPNV 378
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
T+ ++ + + G ++ +L + GI+ + S +I+ A +
Sbjct: 379 ITFNTMIDAYCKEGMMEEGFSL---CSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 435
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L+EM G + Y + CK ++ A +L+ ++ + GL+ + Y+ L++
Sbjct: 436 LNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCM 495
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
++A ++ M + R +P ++
Sbjct: 496 EGKLKAALNVRTRMEKER------------------KQPNVVT----------------- 520
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+N +I +CK +LE A L M+ PN TY
Sbjct: 521 -YNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 85/208 (40%), Gaps = 6/208 (2%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
KA + + EM A + + +CK+ A A + ++ GL+ ++ Y++LI
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ + A L+ M + +Y ++ G + + D+V + V
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELV 375
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
+N++I A+CK G +E+ M+ PN TY LI G + +
Sbjct: 376 P-NVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKE 434
Query: 566 MWHEIKRKISTDGQKGIKFEHN-LVDAF 592
+ +E++ K G KG +N L+D
Sbjct: 435 LLNEMENK----GLKGDVVTYNILIDGL 458
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 106/256 (41%), Gaps = 14/256 (5%)
Query: 56 QQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSS 115
++ Q+Q L + NI + + ++ +EA + + L P+ N+LI
Sbjct: 297 EEMQKQGL-KPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCK 355
Query: 116 LQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFM 175
+ + F V K + + T +T++ + F+L M
Sbjct: 356 KKMMKEATKVFDDV----SKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILP 411
Query: 176 PFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ 235
+ + +CRK L+ +E ++ L K ++ N ++G C +
Sbjct: 412 NVSTYNCLIAGLCRKQD-----LQAAKELLNEMENKGL---KGDVVTYNILIDGLCKNDK 463
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
S +AEK++ M LG++PN ++ L Y ++G + + + + M + +V Y+
Sbjct: 464 S-RNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYN 522
Query: 296 SLISGYVKLGNLESAS 311
LI GY K+ LE+A+
Sbjct: 523 VLIKGYCKINKLEAAN 538
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 125/522 (23%), Positives = 218/522 (41%), Gaps = 58/522 (11%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKN--PKLLDFQ 143
+A + F + A L PS N+LI + N +++F + N P L+ F
Sbjct: 605 DAEQLFDEMLARRLLPSLITYNTLIDGYCK---DGNPEKSFKVRERMKADNIEPSLITF- 660
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
+TLL + A A ++ M K++ F+P L D N A L V+E
Sbjct: 661 --NTLLKGLFKAGMVEDAENVLTEM-KDQGFVPDAFTFSILFDGYSSNDKADAALGVYE- 716
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
A+D L K N Y C+ L C Q + AE+++ G+ PNE + +
Sbjct: 717 ---TAVDSGL---KMNAYTCSILLNALCKEGQ-IEKAEEILGREMAKGLVPNEVLYNTMI 769
Query: 264 YLYALKG-LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI-------- 314
Y+ KG L +++++ M + G + Y+ LI + +LG++E+A + +
Sbjct: 770 DGYSRKGDLVGARMKIDA-MEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGV 828
Query: 315 ------LLCLGGGNMEQSDFSKETYC-EVVKGFLQNG---NVKGLANLI---------IE 355
L GG + +F K C +++K NG NV LI +E
Sbjct: 829 SPSVETYNILIGGYGRKYEFDK---CFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 885
Query: 356 AQ----KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
AQ +E G+ + + +I C + G + A +EM G + L Y +
Sbjct: 886 AQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLID 945
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
+ AEA ++++IS GL+ DV Y++LI + + Q +L+ +M+ + I
Sbjct: 946 GLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKP 1005
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
+Y ++ L EL E+ P + V +N ++H + G ++ A
Sbjct: 1006 TLKTY-HLLISLCTKEGIELTKKIFGEMSLQPDLLV----YNGVLHCYAVHGDMDKAFNL 1060
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++MI + TY SLI G + + V + E+K +
Sbjct: 1061 QKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAR 1102
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 138/345 (40%), Gaps = 36/345 (10%)
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE 202
+T + L+G F L+K M N MP + G L++ K S +
Sbjct: 833 ETYNILIGGYGRKYEFDKCFDLLKEMEDNGT-MPNVVSYGTLINCLCKGSKLL------- 884
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
E + D + PN+ N ++GCC + DA + E M G+ N ++ L
Sbjct: 885 EAQIVKRDMEDRGVSPNVRIYNMLIDGCC-SKGKIEDAFRFSEEMFKKGIELNLVTYNTL 943
Query: 263 AYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
++ G K+ E E ++ E G + Y+SLISGY GN++ R I L
Sbjct: 944 IDGLSMNG---KLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQ---RCIALY-- 995
Query: 320 GGNMEQSDFSK--ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
M+ S +TY ++ + G L I L+P +V + G++
Sbjct: 996 -EEMKTSGIKPTLKTYHLLISLCTKEG--IELTKKIFGEMSLQPDLLVYN-----GVLHC 1047
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
G DKA ++ +M + Y + K + E L+ ++ + ++ +
Sbjct: 1048 YAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPE 1107
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
YD +++ +D+ A+ +R+M+E KG L + G
Sbjct: 1108 ADTYDIIVKGHCEMKDYMGAYVWYREMQE------KGLLLDVCIG 1146
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 133/335 (39%), Gaps = 44/335 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ ACN L G ++S + ++ E M +GV N +F L Y+ G KI
Sbjct: 219 PNVIACNCILNGLA-KMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKING 277
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M E GF +V Y++LI YV+ G LE A + G M +Y ++
Sbjct: 278 FLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMP----DLVSYTSLM 333
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+G + G V+ +AH + M
Sbjct: 334 RGLCRLGRVR--------------------------------------EAHQLFHRMIDR 355
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + +Y + AYCK+ EA L+ ++ G+ D L+E SA
Sbjct: 356 GMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISA 415
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+L ++++ + Y ++ L RP + L+ ++ED + + +N +I
Sbjct: 416 LNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDS-FQPDSDIYNKLIE 474
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+FC++ + +A MI ++P TY SLI+
Sbjct: 475 SFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIH 509
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 132/320 (41%), Gaps = 32/320 (10%)
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV 346
F M F S LI + + E + ++LC E +++ + ++K +++
Sbjct: 148 FPLAMKFLSELIELSKDVSSSEDVFQNLVLC-----TEHCNWNPVIFEMLIKAYVK---- 198
Query: 347 KGLANLIIEA----QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
+LI E+ +K+ G V + I++ + + + +EM G
Sbjct: 199 ---LDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSN 255
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+ C++ + + + G DV Y+ LI++ + + AF L++
Sbjct: 256 AYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYK 315
Query: 463 DM-REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHA 518
M R + DL SY ++M GL R +++ DP V + +N++I A
Sbjct: 316 IMYRRGVMPDLV-SYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVL----YNTLIGA 370
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
+CK G L++A+ L MI + P+ T L+ GY + S L + EI++
Sbjct: 371 YCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQK------ 424
Query: 579 QKGIKFEHNLVDAFLYALVK 598
G+ H++ + +L +
Sbjct: 425 -LGVTVAHDIYKYLIISLCR 443
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 11/246 (4%)
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
++G+V + + +K+E G D +I + V G + A + M G
Sbjct: 268 RDGDVNKINGFL---EKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMP 324
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
L Y ++ C+ R EA QL + G+ DV Y+ LI A Q A SL
Sbjct: 325 DLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLL 384
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT-HD-WNSIIHAF 519
+M I+ + ++ G R + + L+ VVE ++ V HD + +I +
Sbjct: 385 HEMIGIGIHPDSFTCRILVEGYGREGR---LISALNLVVEIQKLGVTVAHDIYKYLIISL 441
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKR--KIST 576
C+ R AK L R++ F+P+ Y LI + + L++ E I R K +T
Sbjct: 442 CREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTT 501
Query: 577 DGQKGI 582
D K +
Sbjct: 502 DTYKSL 507
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 169/382 (44%), Gaps = 43/382 (11%)
Query: 209 LDENLD-FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
LDE D PNIY N +EG C + + +A+K++E M+V G P+ + Y
Sbjct: 135 LDEMRDKGCSPNIYTYNVIVEGLCEE-RKLDEAKKMLEEMAVRGYFPD-----VVTYNSF 188
Query: 268 LKGLQ--EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
+KGL +++ E + + +V Y+++I+G K G+L+SASR + +M
Sbjct: 189 IKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRML------DHMSN 242
Query: 326 SDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKL--EPSGIVVDRSVGFGIISACVNL 381
+ + TY ++ GF + G V+ L+ KL P+ + + +G A L
Sbjct: 243 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLG-----ALHRL 297
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG-------- 433
G KA +L EM G + + Y + CK R +A + + G
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357
Query: 434 --LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH--RP 489
L +D+ Y L++ F A +LF + + +I + + +M +++H R
Sbjct: 358 SMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVM---LDSHCKRR 414
Query: 490 ELMAAFL--DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
++ A +++E V T WN ++H C RL DA+ L M+ F P+ TY
Sbjct: 415 QIDKALQIHKQMLEKNCCNVVT--WNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTY 472
Query: 548 LSLINGYVTAEQYFSVLMMWHE 569
+L++ + + L ++ E
Sbjct: 473 GTLVDAMCKCGKSAAALELFEE 494
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
DKA ++ EM C + L+ C+ ++ +A +L+ + G D Y+AL
Sbjct: 24 DKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNAL 83
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I ++DF AF +M + +Y I+ GL + R LDE + D
Sbjct: 84 ISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDE-MRDKG 142
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ +N I+ C+ +L++AK+ L M + P+ TY S I G ++
Sbjct: 143 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDR 197
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 152/403 (37%), Gaps = 24/403 (5%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A V + M +P+ +F L EK +L M E G Y++LIS
Sbjct: 26 ASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALIS 85
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
GY K + A + + + + + TY +V G + + L+ E +
Sbjct: 86 GYSKAKDFGQAFKFLAEMVKNHCLP----TVVTYTNIVDGLCKAERTRDAVKLLDEMRDK 141
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
S + +V I+ D+A +L+EM G + Y +K CK R
Sbjct: 142 GCSPNIYTYNV---IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRV 198
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
EA + ++ + DV +Y +I S D SA + M +Y ++
Sbjct: 199 DEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSL 255
Query: 480 MTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+ G + E LD +++ P + +NS++ A + G + A+ L M
Sbjct: 256 IDGFCKGGEVERAMGLLDSMLKLGCRPNMVA----YNSLLGALHRLGHIGKAEDMLVEME 311
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY-- 594
F P+ +Y + I+G AE+ ++ + + T + +VD LY
Sbjct: 312 RRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS--YSMLIVDILLYTV 369
Query: 595 ---ALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKK 634
L KGG FD + K + K+ + +++H K
Sbjct: 370 LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCK 412
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+Y ++ L HR + +A E++ D + + ++ C++ +LE A++ L R
Sbjct: 9 TYNKLLLQLTREHRHDKASAVFQEMI-DKSCQPDAFTFAILLRGLCRSNQLEKARKLLGR 67
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQY 560
M + P+D Y +LI+GY A+ +
Sbjct: 68 MKEMGCVPDDAIYNALISGYSKAKDF 93
>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 133/335 (39%), Gaps = 44/335 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ ACN L G ++S + ++ E M +GV N +F L Y+ G KI
Sbjct: 223 PNVIACNCILNGLA-KMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKING 281
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M E GF +V Y++LI YV+ G LE A + G M +Y ++
Sbjct: 282 FLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMP----DLVSYTSLM 337
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+G + G V+ +AH + M
Sbjct: 338 RGLCRLGRVR--------------------------------------EAHQLFHRMIDR 359
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + +Y + AYCK+ EA L+ ++ G+ D L+E SA
Sbjct: 360 GMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISA 419
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+L ++++ + Y ++ L RP + L+ ++ED + + +N +I
Sbjct: 420 LNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDS-FQPDSDIYNKLIE 478
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+FC++ + +A MI ++P TY SLI+
Sbjct: 479 SFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIH 513
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 132/320 (41%), Gaps = 32/320 (10%)
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV 346
F M F S LI + + E + ++LC E +++ + ++K +++
Sbjct: 152 FPLAMKFLSELIELSKDVSSSEDVFQNLVLC-----TEHCNWNPVIFEMLIKAYVK---- 202
Query: 347 KGLANLIIEA----QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
+LI E+ +K+ G V + I++ + + + +EM G
Sbjct: 203 ---LDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSN 259
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+ C++ + + + G DV Y+ LI++ + + AF L++
Sbjct: 260 AYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYK 319
Query: 463 DM-REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHA 518
M R + DL SY ++M GL R +++ DP V + +N++I A
Sbjct: 320 IMYRRGVMPDLV-SYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVL----YNTLIGA 374
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
+CK G L++A+ L MI + P+ T L+ GY + S L + EI++
Sbjct: 375 YCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQK------ 428
Query: 579 QKGIKFEHNLVDAFLYALVK 598
G+ H++ + +L +
Sbjct: 429 -LGVTVAHDIYKYLIISLCR 447
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 11/246 (4%)
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
++G+V + + +K+E G D +I + V G + A + M G
Sbjct: 272 RDGDVNKINGFL---EKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMP 328
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
L Y ++ C+ R EA QL + G+ DV Y+ LI A Q A SL
Sbjct: 329 DLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLL 388
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT-HD-WNSIIHAF 519
+M I+ + ++ G R + + L+ VVE ++ V HD + +I +
Sbjct: 389 HEMIGIGIHPDSFTCRILVEGYGREGR---LISALNLVVEIQKLGVTVAHDIYKYLIISL 445
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKR--KIST 576
C+ R AK L R++ F+P+ Y LI + + L++ E I R K +T
Sbjct: 446 CREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTT 505
Query: 577 DGQKGI 582
D K +
Sbjct: 506 DTYKSL 511
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 154/348 (44%), Gaps = 19/348 (5%)
Query: 238 SDAEKVIETMSVLGVRPNESSF-GFLAYLYALKGLQEKIVELESLMNEFGFSS-QMVFYS 295
D E+++ETM+ ++PN S+ G L L L+ E + +++ G S+ MV YS
Sbjct: 27 GDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYS 86
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--- 352
+L+SGY K G +E SR +L + + Y +VV ++ + L
Sbjct: 87 TLLSGYCKAGKVEE-SRELLKEVISRGLRPDAL---MYTKVVASLCKSARLGEALELLEE 142
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+I A P+ I + +IS C + A S+L +M A G + Y +
Sbjct: 143 MIRAGCC-PTLITFNT-----LISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDG 196
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
CK R EA QL+ + +SG DV Y + + S A + MR++
Sbjct: 197 LCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPN 256
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+Y TI+ GL ++ + + ++++ + +++++ CK GR ++A+ +
Sbjct: 257 VVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVM 316
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQK 580
M P+ TY SL+NG A + + E R+++ +G K
Sbjct: 317 EAMARAGCRPDVVTYSSLVNGLCKAGKIEEAV----EAVREMAMEGCK 360
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 144/357 (40%), Gaps = 44/357 (12%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P + N + GCC +++ A+ +++ M+ GV+ + ++ L G ++ +
Sbjct: 150 PTLITFNTLISGCCRE-KNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQ 208
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS--DFSKETYCE 335
L M G + +V YSS + G K G + A + + M S D + TY
Sbjct: 209 LLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLE------QMRDSHHDPNVVTYNT 262
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEM 394
++ G ++G + ++ + + G+ V VG+ ++ LG + +A S+++ M
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDGCGLNV---VGYSTVVDGLCKLGRTQEARSVMEAM 319
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
GC + Y + CK + EA + V +++ G + + Y +L+ +
Sbjct: 320 ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRL 379
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A E E+ + P V +N+
Sbjct: 380 AEA---------------------------ERMVEEMSSGGGGGHHCPPSVST----YNA 408
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+I CKAGR++DA + +RM +P+ +Y +++ G + + M+ E++
Sbjct: 409 LIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 10/233 (4%)
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M+ GC + + + K+ R + +L+ +++ +Q +V +Y+ L+E +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 454 FQSAFSLFRDM--REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ A L RDM R R +Y T+++G + + E L EV+ +
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRG-LRPDALM 119
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+ ++ + CK+ RL +A L MI P T+ +LI+G + L M +
Sbjct: 120 YTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKN----LEMADSLL 175
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+K++ G K +N + L K G Q++E+ + D Y
Sbjct: 176 QKMAASGVKADVVTYN---TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAY 225
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 75/200 (37%), Gaps = 47/200 (23%)
Query: 125 AFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFL 184
A++S VY + K+ K+LD H +L MR+++
Sbjct: 224 AYSSFVYGLCKSGKVLD---AHQVLEQMRDSH---------------------------- 252
Query: 185 VDICRKNSNFVAFLKVFEECCRIA-LDENLDFMKP---------NIYACNAALEGCCYGL 234
+ N V + + + C+ +D L+ M+ N+ + ++G C L
Sbjct: 253 -----HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCK-L 306
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
+A V+E M+ G RP+ ++ L G E+ VE M G V Y
Sbjct: 307 GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTY 366
Query: 295 SSLISGYVKLGNLESASRTI 314
SL+ G G L A R +
Sbjct: 367 CSLVHGLCSCGRLAEAERMV 386
>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 144/340 (42%), Gaps = 23/340 (6%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN 283
N + G C+ + +A K +E M G+ P +F + Y+ GL+EK + +M
Sbjct: 328 NICVSGLCWA-GWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMV 386
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN 343
+FG + SSLI G KL L+ A + + +E +K + ++ G+ +
Sbjct: 387 KFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMI----VEGLPINKAAFTLLLDGYFRM 442
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
G+V G +L E +E GI D I+ +GL D+A+ + +M+ G
Sbjct: 443 GDVAGAYSLWNE---MEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNN 499
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
VY ++ +C R EA L +++ GL D+ + +I +SA +FR+
Sbjct: 500 FVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRN 559
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-------DPRVEVKTHDWNSII 516
M + +Y T++ G + DEVV DP + +N +
Sbjct: 560 MHHTGLIPDIVTYNTLIDG----YCKAFDTVSTDEVVNKMYATGWDPDITT----YNIRL 611
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
H C ++ A L +I P+ TY +++NG T
Sbjct: 612 HGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCT 651
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 93/222 (41%), Gaps = 4/222 (1%)
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V+ GF + G+VK +L+ QK + V ++ +I+A G + A + M
Sbjct: 155 VILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNI---LINAYCTRGQTFDALGWMRFMI 211
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC+ L + + A+C + EA L + +G +V Y+ L+ + ++D
Sbjct: 212 DNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIG 271
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A L+ +M+ + ++ ++ G R E L ++ + + +N
Sbjct: 272 QANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQ-SGSLSISSLYNIC 330
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ C AG L++A + L M+ P + S+I Y A
Sbjct: 331 VSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRA 372
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 146/402 (36%), Gaps = 99/402 (24%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++YA N + C Q+ DA + M G P+ +FG + + +G +
Sbjct: 181 QPDVYAYNILINAYCTRGQTF-DALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEAR 239
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE----- 331
L M E G +V Y++L++GYVK +R I G NM + +
Sbjct: 240 NLFDGMKEAGHIPNVVCYNTLMNGYVK-------ARDI----GQANMLYEEMKSKAVAPD 288
Query: 332 --TYCEVVKGFLQNGN--------------------------VKGL--ANLIIEAQK--- 358
T+ +V G + G V GL A + EA K
Sbjct: 289 CTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLE 348
Query: 359 -LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK------ 411
+ GI II+A GL +KA+ M V G++ +L
Sbjct: 349 DMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMM------VKFGLFPSSLTCSSLIM 402
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
K R EA L+ ++ GL ++ + L++ D A+SL+ +M I+
Sbjct: 403 GLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIH- 461
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
P+ +A +++ I+ G +++A
Sbjct: 462 -----------------PDAVA------------------FSAFINGLSIVGLVDEAYDV 486
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+M F PN+ Y SLI G+ + + LM+ E+ RK
Sbjct: 487 FLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARK 528
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 130/305 (42%), Gaps = 14/305 (4%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
RP++ L G + EL + E G + V ++LI G G L ASR
Sbjct: 450 RPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASR 509
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
+ L G + TY ++ GF G V+G L E K GI D
Sbjct: 510 IVKEMLERG----LPMDRITYNALILGFCNEGKVEGCFRLREEMTK---RGIQPDIYTYN 562
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
++ N+G D A + DE A G + Y ++ YCK +R + L ++ S
Sbjct: 563 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 622
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
++L+ Y+ +I+A + + +A L +M+ I +Y +++ G+ E
Sbjct: 623 KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDA 682
Query: 493 AAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+DE+ ++ P V T ++I +CK G+++ A+ T MI PN TY
Sbjct: 683 KHLIDEMRKEGFVPNVVCYT----ALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTV 738
Query: 550 LINGY 554
+I+GY
Sbjct: 739 MIDGY 743
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 141/338 (41%), Gaps = 58/338 (17%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE--KIVELESL 281
NA + G C V ++ E M+ G++P+ ++ FL L+GL K+ + L
Sbjct: 527 NALILGFC-NEGKVEGCFRLREEMTKRGIQPDIYTYNFL-----LRGLCNVGKLDDAIKL 580
Query: 282 MNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
+EF G S + Y ++ GY K +E L ++ + + Y ++K
Sbjct: 581 WDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLS----KKMELNSIVYNIIIK 636
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
QNGNV L+ + ++ GI+ + + +I N+GL + A ++DEM G
Sbjct: 637 AHCQNGNVAAALQLL---ENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG 693
Query: 399 CSVGLGVYVPTLKAYCK--EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
+ Y + YCK + TAE+T L ++ S + + Y +I+ + +
Sbjct: 694 FVPNVVCYTALIGGYCKLGQMDTAESTWL--EMISFNIHPNKFTYTVMIDGYCKLGNMEK 751
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A +L M+E+ I P+++ +N +
Sbjct: 752 ANNLLIKMKESGIV------------------PDVVT------------------YNVLT 775
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ FCKA +++A + +M ++ TY +L++G+
Sbjct: 776 NGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/387 (19%), Positives = 155/387 (40%), Gaps = 64/387 (16%)
Query: 201 FEECCRI--ALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
FE+CC + + E P++++ + C G + +A ++ M LG+ PN +
Sbjct: 225 FEKCCEVFRVMSEG---ACPDVFSFTNVINALCKG-GKMENAIELFMKMEKLGISPNVVT 280
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ + G + EL+ M G + Y +LI+G +KL + + + +
Sbjct: 281 YNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMI 340
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIIS 376
G G + + + ++ G+ + GN++G + ++ ++ + P+ + +
Sbjct: 341 GSG----FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTL---------- 386
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
++ +CK + A + +I SSGL +
Sbjct: 387 ------------------------------YSLMQGFCKSDQIEHAENALEEILSSGLSI 416
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT-GLMENHR----PEL 491
N +++ + SAF F M +R + LT++ GL ++ + EL
Sbjct: 417 HPDNCYSVVHWLCKKFRYHSAFR-FTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATEL 475
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
L++ P +V + N++IH C AG+L +A R ++ M+ + TY +LI
Sbjct: 476 WFRLLEK--GSPASKVTS---NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALI 530
Query: 552 NGYVTAEQYFSVLMMWHEI-KRKISTD 577
G+ + + E+ KR I D
Sbjct: 531 LGFCNEGKVEGCFRLREEMTKRGIQPD 557
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
L+ + + + +F+ +FR M E D+ S+ ++ L + + E A L +E
Sbjct: 215 LLSSLVKANEFEKCCEVFRVMSEGACPDVF-SFTNVINALCKGGKME-NAIELFMKMEKL 272
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+ +N II+ C+ GRL++A +M +PN +TY +LING + + V
Sbjct: 273 GISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKV 332
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAF 592
H + I + + +NL+D +
Sbjct: 333 ---NHVLDEMIGSGFNPNVVVFNNLIDGY 358
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 167/407 (41%), Gaps = 46/407 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP++ N + G C + ++A +I+ M G +PN ++G + + G +
Sbjct: 288 KPDLITINTLVNGLCLSGKE-AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
EL M E V YS +I G K G+L++A ME + TY
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF------NEMEMKGITTNIITYN 400
Query: 335 EVVKGFLQNGNVKGLANLIIE--AQKLEPS----GIVVDRSVGFGIISAC-------VNL 381
++ GF G A L+ + +K+ P+ +++D V G + ++
Sbjct: 401 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 460
Query: 382 GLS-------------------DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G++ DKA+ ++D M + GC + + + YCK +R +
Sbjct: 461 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 520
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+L +S G+ D Y+ LI+ A LF++M ++ +Y ++ G
Sbjct: 521 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 580
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
L +N E A + E +E ++E+ +N IIH C A +++DA + +P
Sbjct: 581 LCDNGESE-KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 639
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
+TY +I G +++ RK+ DG + +N++
Sbjct: 640 GVKTYNIMIGGLCKKGPLSEAELLF----RKMEEDGHAPDGWTYNIL 682
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 130/316 (41%), Gaps = 30/316 (9%)
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
LG PN +F L L+G + +EL M E G ++ ++L++G
Sbjct: 250 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNG--------- 300
Query: 310 ASRTILLCLGGGNMEQS---DFSKETYCE---VVKGFLQNGNVK-GLANLIIE-AQKLEP 361
LCL G E D E C+ V G + N K G L +E +K+E
Sbjct: 301 ------LCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 354
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
I +D II G D A ++ +EM G + + Y + +C R +
Sbjct: 355 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 414
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
+L+ D+ + +V + LI++ + + A L ++M I +Y +++
Sbjct: 415 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 474
Query: 482 GLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
G + + + +D +V DP + +N +I+ +CKA R++D R+M
Sbjct: 475 GFCKENHLDKANQMVDLMVSKGCDPNIRT----FNILINGYCKANRIDDGLELFRKMSLR 530
Query: 539 QFEPNDQTYLSLINGY 554
+ TY +LI G+
Sbjct: 531 GVVADTVTYNTLIQGF 546
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 146/334 (43%), Gaps = 9/334 (2%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+Y N + C+ L V+ A V+ + LG +P+ +SF L L+G + + L
Sbjct: 108 NVYTLNVLINSFCH-LNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHL 166
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M GF +V Y++LI+G K G+ +A R +L + GN Q D Y ++
Sbjct: 167 FDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIR-LLRSMEKGNC-QPDVV--VYGTLIH 222
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
++ NL E + GI + ++ A NLG +++L+EM
Sbjct: 223 SLCKDRQQTQAFNLFSE---MITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ A CKE A+A +V + SG++ DV Y ALI+ + A
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAV 339
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
+F M SY T++ G + R + A +L E + ++ T +N++IH
Sbjct: 340 KVFDMMVHKGCAPNVFSYNTLINGYCKIERMD-KAMYLFEEMCRQKLIPNTVTYNTLIHG 398
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
C GRL+DA R M+ P+ TY L++
Sbjct: 399 LCHVGRLQDAIALFREMVACGQIPDLVTYRILLD 432
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 139/351 (39%), Gaps = 30/351 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P++ A ++G C + +A KV + M G PN S+ L Y +K
Sbjct: 315 VEPDVVTYTALIDGHCLR-SEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKA 373
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L M V Y++LI G +G L+ A + G + TY
Sbjct: 374 MYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPD----LVTYRI 429
Query: 336 VVKGFLQNGNV-KGLANL-IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ +N ++ K +A L IE L+P D + +I G + A +
Sbjct: 430 LLDYLCKNCHLDKAMALLKAIEGSNLDP-----DIQIYTIVIDGMCRAGELEDARDLFSN 484
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
+++ G + Y CK EAT+L M++ + D Y+ + + + + +
Sbjct: 485 LSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNE 544
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDW 512
A L +M AR + S T++ G++ + + A L+++ R++VK
Sbjct: 545 TSRAIQLLEEML-ARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVKD--- 600
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMI-----FLQFEPNDQTYLSLINGYVTAE 558
FCK ED L ++I +L+ D +LS + Y E
Sbjct: 601 ----TVFCK----EDDINALGKVISDLNDWLEELEEDMIFLSTPSTYSEME 643
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 130/305 (42%), Gaps = 14/305 (4%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
RP++ L G + EL + E G + V ++LI G G L ASR
Sbjct: 427 RPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASR 486
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
+ L G + TY ++ GF G V+G L E K GI D
Sbjct: 487 IVKEMLERG----LPMDRITYNALILGFCNEGKVEGCFRLREEMTK---RGIQPDIYTYN 539
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
++ N+G D A + DE A G + Y ++ YCK +R + L ++ S
Sbjct: 540 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 599
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
++L+ Y+ +I+A + + +A L +M+ I +Y +++ G+ E
Sbjct: 600 KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDA 659
Query: 493 AAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+DE+ ++ P V T ++I +CK G+++ A+ T MI PN TY
Sbjct: 660 KHLIDEMRKEGFVPNVVCYT----ALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTV 715
Query: 550 LINGY 554
+I+GY
Sbjct: 716 MIDGY 720
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 140/338 (41%), Gaps = 58/338 (17%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE--KIVELESL 281
NA + G C V ++ E M+ G++P+ ++ FL L+GL K+ + L
Sbjct: 504 NALILGFC-NEGKVEGCFRLREEMTKRGIQPDIYTYNFL-----LRGLCNVGKLDDAIKL 557
Query: 282 MNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
+EF G S + Y ++ GY K +E L ++ + + Y ++K
Sbjct: 558 WDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLS----KKMELNSIVYNIIIK 613
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
QNGNV L+ + ++ GI+ + + +I N+GL + A ++DEM G
Sbjct: 614 AHCQNGNVAAALQLL---ENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG 670
Query: 399 CSVGLGVYVPTLKAYCK--EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
+ Y + YCK + TAE+T L M S + + Y +I+ + +
Sbjct: 671 FVPNVVCYTALIGGYCKLGQMDTAESTWLEM--ISFNIHPNKFTYTVMIDGYCKLGNMEK 728
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A +L M+E+ I P+++ +N +
Sbjct: 729 ANNLLIKMKESGIV------------------PDVVT------------------YNVLT 752
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ FCKA +++A + +M ++ TY +L++G+
Sbjct: 753 NGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/387 (19%), Positives = 155/387 (40%), Gaps = 64/387 (16%)
Query: 201 FEECCRI--ALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
FE+CC + + E P++++ + C G + +A ++ M LG+ PN +
Sbjct: 202 FEKCCEVFRVMSEG---ACPDVFSFTNVINALCKG-GKMENAIELFMKMEKLGISPNVVT 257
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ + G + EL+ M G + Y +LI+G +KL + + + +
Sbjct: 258 YNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMI 317
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIIS 376
G G + + + ++ G+ + GN++G + ++ ++ + P+ + +
Sbjct: 318 GAG----FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTL---------- 363
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
++ +CK + A + +I SSGL +
Sbjct: 364 ------------------------------YSLMQGFCKSDQIEHAENALEEILSSGLSI 393
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT-GLMENHR----PEL 491
N +++ + SAF F M +R + LT++ GL ++ + EL
Sbjct: 394 HPDNCYSVVHWLCKKFRYHSAFR-FTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATEL 452
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
L++ P +V + N++IH C AG+L +A R ++ M+ + TY +LI
Sbjct: 453 WFRLLEK--GSPASKVTS---NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALI 507
Query: 552 NGYVTAEQYFSVLMMWHEI-KRKISTD 577
G+ + + E+ KR I D
Sbjct: 508 LGFCNEGKVEGCFRLREEMTKRGIQPD 534
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ + +F+ +FR M E D+ S+ ++ L + + E A L +E +
Sbjct: 197 VKANEFEKCCEVFRVMSEGACPDVF-SFTNVINALCKGGKME-NAIELFMKMEKLGISPN 254
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+N II+ C+ GRL++A +M +PN +TY +LING + + V H
Sbjct: 255 VVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKV---NH 311
Query: 569 EIKRKISTDGQKGIKFEHNLVDAF 592
+ I + +NL+D +
Sbjct: 312 ILDEMIGAGFNPNVVVFNNLIDGY 335
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 170/434 (39%), Gaps = 85/434 (19%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN Y N + C +++DA + M G+ P+ ++ L + KG+ +
Sbjct: 205 LHPNHYTFNLLVHTHC-SKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEA 263
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
L + M + G Y++L+S Y +LG ++ A+ + M F + TY
Sbjct: 264 RTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVV------EAMTAFGFEPDLWTY 317
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILD 392
+ G Q G V L E ++L GIV V + ++ AC S A ++L+
Sbjct: 318 NVLAAGLCQAGKVDEAFKLKDEMEQL---GIVSPDVVTYNTLVDACFKCQRSSDALNLLE 374
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM G L + +K C+E + EA + ++ GL DV Y+ LI+AS +
Sbjct: 375 EMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAG 434
Query: 453 DFQSAFSLFRDMREARI-----------YDL------------------KG------SYL 477
+ AF L +M + + Y+L +G SY
Sbjct: 435 NVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYG 494
Query: 478 TIMTGLMENHRPELMAAFLDEVVE---DPRVEV--------------------------- 507
T+M + ++PE DE+++ P +
Sbjct: 495 TVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEM 554
Query: 508 ----KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING---YVTAEQY 560
+N IIHA+CK G LE A + +M+ F+P+ T +L+NG Y E+
Sbjct: 555 GLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKA 614
Query: 561 FSVLMMWHEIKRKI 574
+ W E +K+
Sbjct: 615 MKLFESWVEKGKKV 628
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 189/438 (43%), Gaps = 38/438 (8%)
Query: 72 ETNLHKSLLTNNT-----------DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNH 120
E + SL+T+N +EA + +T L P N+LI +
Sbjct: 378 EKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLI---DASCKAG 434
Query: 121 NLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELW 180
N+ +AF + ++ K+ F T++TLL ++ A L++ R F+P E+
Sbjct: 435 NVAKAFVLMDEMVRSGLKMDTF-TLNTLLYNLCKEKRYEEAEELLRAP-PQRGFVPDEVS 492
Query: 181 GGFLVDICRKNSNFVAFLKVFEECCRIAL-DENLDF-MKPNIYACNAALEGCCYGLQSVS 238
G ++ A+ K ++ + L DE + + P+I N ++G +
Sbjct: 493 YGTVM---------AAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTE 543
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+K+ E M +G+ P+++++ + + Y +G EK + + M E F +V ++L+
Sbjct: 544 AIDKLNELME-MGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLM 602
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
+G G LE A + + G ++ D TY +++ ++ +V +
Sbjct: 603 NGLCLYGRLEKAMKLFESWVEKG--KKVDVI--TYNTLIQALCKDNDVDTALRFFAD--- 655
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+E G+ D ++SA G S +A +L ++N G G Y P++K+ +
Sbjct: 656 MEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFY-PSIKSSVEAVE 714
Query: 419 TAEATQLVMDISSSGLQL--DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
T + ++ DI S G D +Y+ I+ + A ++ +M + + +Y
Sbjct: 715 TGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTY 774
Query: 477 LTIMTGLMENHRPELMAA 494
+T+M GL++ + + AA
Sbjct: 775 ITLMEGLIKRQKRQTHAA 792
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 156/386 (40%), Gaps = 35/386 (9%)
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
L+D K N + +E R L K + + N L C + +AE++
Sbjct: 426 LIDASCKAGNVAKAFVLMDEMVRSGL-------KMDTFTLNTLLYNLCKE-KRYEEAEEL 477
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+ G P+E S+G + Y + E + L M + + + Y++LI G
Sbjct: 478 LRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLST 537
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKG---LANLIIEAQKLE 360
+G L A + + G + TY ++ + + G+++ N ++E +
Sbjct: 538 MGKLTEAIDKLNELMEMGLVPDD----TTYNIIIHAYCKEGDLEKAFQFHNKMVE-NSFK 592
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
P + + +++ G +KA + + G V + Y ++A CK++
Sbjct: 593 PDVVTCNT-----LMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVD 647
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEA-SITSQDFQSAFSLFRDMREARIY------DLK 473
A + D+ GLQ DV Y+ L+ A S + ++ L + ++Y +K
Sbjct: 648 TALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIK 707
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
S + TG PE+ + E V + + + +N I C G+L++AK L
Sbjct: 708 SSVEAVETG----KDPEVKSDI--ESVGNTQGD-DQESYNKYIKELCIGGQLKEAKAVLD 760
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQ 559
M+ ++ TY++L+ G + ++
Sbjct: 761 EMMQKGMSVDNSTYITLMEGLIKRQK 786
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 157/341 (46%), Gaps = 19/341 (5%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVF 293
V +A K++E M ++G P+ ++F + Y + +++E L++ GF+ +
Sbjct: 261 VDEALKLLEEMFLMGCPPDVNTFNTVIYGFCR---LNRVLEGAKLVDRMILKGFTPNDMT 317
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y L+ G K ++ A + +L + G N+ + +V GF++NG + +
Sbjct: 318 YGYLMHGLCKTCRIDEA-QALLSKVPGPNVVH-------FNTLVNGFVRNGRLNEATAFV 369
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ K+ +G V D +++ GL A ++++M+A GC L Y + +
Sbjct: 370 YD--KMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGF 427
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK+ + EA ++ ++ + G L+ Y+ALI A A +F +M
Sbjct: 428 CKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDI 487
Query: 474 GSYLTIMTGLME-NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
++ +++ GL + + +A + D V+E V + +N++IHAF + G +++A + +
Sbjct: 488 FTFNSLIFGLCRVDEMEDALALYRDMVLEG--VIANSVTFNTLIHAFLRRGEIQEALKLV 545
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
M+F ++ TY LI L ++ E+ RK
Sbjct: 546 NDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRK 586
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 188/432 (43%), Gaps = 76/432 (17%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE--KI 275
P++ N + G C L V + K+++ M + G PN+ ++G+L + GL + +I
Sbjct: 278 PDVNTFNTVIYGFCR-LNRVLEGAKLVDRMILKGFTPNDMTYGYL-----MHGLCKTCRI 331
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
E ++L+++ +V +++L++G+V+ G L A+ + M + + + T+
Sbjct: 332 DEAQALLSKVP-GPNVVHFNTLVNGFVRNGRLNEATAFVY-----DKMINNGYVPDVFTF 385
Query: 334 CEVVKGFLQNGNVKGLANLI--IEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKA 387
+V G + G L+ ++A+ +P+ I++D GF G ++A
Sbjct: 386 STLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILID---GF------CKKGQLEEA 436
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
IL EM G S+ Y + A CK + EA + ++SS G + D+ +++LI
Sbjct: 437 GLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFG 496
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF------------ 495
+ + A +L+RDM + ++ T++ + R E+ A
Sbjct: 497 LCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFL--RRGEIQEALKLVNDMLFRGCP 554
Query: 496 LDEVVEDPRVEV--KTH----------------------DWNSIIHAFCKAGRLEDAKRT 531
LDE+ + ++ KT N +I+ FC AG++ +A
Sbjct: 555 LDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEF 614
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDA 591
+R MI F P+ TY SLING + L ++ +++ +GI+ + +
Sbjct: 615 MRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQ-------AEGIQPDSITYNT 667
Query: 592 FLYALVKGGFFD 603
+ L + G FD
Sbjct: 668 LICWLCREGAFD 679
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 145/338 (42%), Gaps = 17/338 (5%)
Query: 218 PNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQEKI 275
P+++ + + G C GL A +++ M G +PN +++ L + KG L+E
Sbjct: 380 PDVFTFSTLVNGLCKKGL--FGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAG 437
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ L ++ + GFS V Y++LIS K G + A G M + T+
Sbjct: 438 LILREMLTK-GFSLNTVGYNALISALCKHGKIHEALDMF------GEMSSKGCKPDIFTF 490
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G + V + + + + + G++ + +I A + G +A ++++
Sbjct: 491 NSLIFGLCR---VDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVND 547
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M GC + Y +KA CK + L ++ GL + + LI T+
Sbjct: 548 MLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGK 607
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+A RDM +Y +++ GL + R + A L E ++ ++ + +N
Sbjct: 608 VHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQ-EALNLFEKLQAEGIQPDSITYN 666
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
++I C+ G +DA L R + F PND T+ L+
Sbjct: 667 TLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A +L+EM GC + + + +C+ +R E +LV + G + Y L
Sbjct: 262 DEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYL 321
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL-DEVVEDP 503
+ + A +L + + T++ G + N R AF+ D+++ +
Sbjct: 322 MHGLCKTCRIDEAQALLSKVPGPNVVHFN----TLVNGFVRNGRLNEATAFVYDKMINNG 377
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
V ++++++ CK G A + M +PN TY LI+G+ Q
Sbjct: 378 YVP-DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEA 436
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
++ E+ KG +A + AL K G
Sbjct: 437 GLILREML-------TKGFSLNTVGYNALISALCKHG 466
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 183/451 (40%), Gaps = 58/451 (12%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
++H LL ++ +APAFAL MF+ R + + L +C A L++ +
Sbjct: 125 SLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARA-LELLRQ 179
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
R PN N + G C + + + + E G+ PN+ ++G +
Sbjct: 180 MPR-----------PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVI 228
Query: 264 YLYALKG-LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ G + E + + ++ + + V Y++LI GY G L++A LL
Sbjct: 229 SGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA----LLYRDRMV 284
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ TY +V +G L+ +++ G+ +D +I+ G
Sbjct: 285 ERGVAMTVATYNLLVHALFMDGRGTEAYELV---EEMGGKGLALDVFTYNILINGHCKEG 341
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
KA I + M+ G + Y + A K+ + E +L + G++ D+ Y+
Sbjct: 342 NVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 401
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE- 501
ALI + TS + AF + +M + RI +Y T+M GL R + +DE+ +
Sbjct: 402 ALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKR 461
Query: 502 --------------------DPRVEVKTHD-------------WNSIIHAFCKAGRLEDA 528
D + ++ + +N++I CK G+ +DA
Sbjct: 462 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 521
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ ++ M+ P+D TY+SLI G T ++
Sbjct: 522 ENMVKEMVENGITPDDSTYISLIEGLTTEDE 552
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 131/586 (22%), Positives = 227/586 (38%), Gaps = 53/586 (9%)
Query: 51 PNSPTQQQQQQTLTQDNIT-SLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSL 109
P SPT Q +L + + S E KS+ + + + +F+ + + + P N +
Sbjct: 141 PLSPTSHQLLNSLLRMSTKFSAECQAQKSVPASCSTQCLSAFQEMARHGVAPFVKECNCV 200
Query: 110 IAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCM- 168
+ L ++ RA S + + P + T +TLL S A A AL+K M
Sbjct: 201 LRVLRDAARWDDM-RAVYSDMLQLGVEPSIF---TYNTLLDSFCKAGRMDQAVALLKDME 256
Query: 169 FKNRYFMPFELW----------------GGFLVDICRKNSNFVAFL-----------KVF 201
+ +P ++ LVDI R + AF
Sbjct: 257 ARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFTYNPLITGLLARDFV 316
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
E+ + L+ + + P + N ++G + + A+ + M G+ P+ ++
Sbjct: 317 EKAGALLLEMENEGIVPTVVTYNTLIDGL-FKTGNAEAAQVKFDEMRAKGLLPDLITYNS 375
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L Y G ++ + L + G ++ Y+ LI GY +LG+LE A R
Sbjct: 376 LINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRL------KE 429
Query: 322 NMEQSDFSKETYCEVVKGFLQNGN--VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
M + D + + L NG+ V+ LA + I ++ G+ D ISA +
Sbjct: 430 EMTEEDCLPDVCTYTI---LMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAEL 486
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
+G A + +EM G S Y + CK +A L M + + GL+LD
Sbjct: 487 TIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCV 546
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y LI A A ++F M + + +Y + L + ++
Sbjct: 547 TYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKM 606
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+E+ VE +N ++HA C+ GR E A + M+ PN TY LI+G
Sbjct: 607 LEE-GVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGN 665
Query: 560 YFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAV 605
+ + ++ E+ QKGI +H +A +G +DAV
Sbjct: 666 WVHAIRLYCEMH-------QKGIHPDHCTHNALFKGFGEGHMYDAV 704
>gi|255586858|ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525946|gb|EEF28343.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 138/328 (42%), Gaps = 55/328 (16%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKI-----VELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
+RPN +SF + + GL + V L M E G + ++ Y++LI+G
Sbjct: 227 IRPNTASFSIV-----INGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDR 281
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
LE + + + ME+S F +P+ +
Sbjct: 282 LEESYKLL------KEMEESGF-------------------------------KPTQFTL 304
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+ G C +S A ++ +M GC + Y ++ CK + AEA+ +
Sbjct: 305 NSIFG----CLCKRQDVS-GALDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIFL 359
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR-EARIYDLKGSYLTIMTGLME 485
D+ G ++ Y AL+ I Q+ A LF+D+ R D+ +Y +M GL E
Sbjct: 360 TDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPDVI-AYNILMKGLYE 418
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
HR E +E+V + +N +I +CK G ++DA L M + EPN
Sbjct: 419 AHRTEEARNLFNEMVMKGLIP-SVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVF 477
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRK 573
TY +LI+G A + +M+W+E++R+
Sbjct: 478 TYTTLIDGLCKAGRPDDAVMLWNEMRRR 505
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 84/190 (44%), Gaps = 17/190 (8%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G DK+ +++M + + + + K+ R + QL + GL D+ Y
Sbjct: 58 GQVDKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLY 117
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
D LI +++ A SL+ +M+ +I G +++ E + + L+E +E
Sbjct: 118 DVLIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSFPEEGK---LIDILEETLE 174
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF------LQFE--------PNDQTY 547
D +E +T NS++ + +G ++ A LR M+ +Q++ PN ++
Sbjct: 175 DMNIETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASF 234
Query: 548 LSLINGYVTA 557
+ING + A
Sbjct: 235 SIVINGLMQA 244
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 139/331 (41%), Gaps = 18/331 (5%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y++L++GY + G L++A R I +M TY +++G G V +L+
Sbjct: 108 YNTLVAGYCRYGRLDAARRLI------ASMPVPP-DAYTYTPLIRGLCDRGRVGDALSLL 160
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ + E VV +V + G +A +LDEM A GC+ + Y +
Sbjct: 161 DDMLRRECQPSVVTYTVLLEAVCKSSGFG---QAMKVLDEMRAKGCTPNIVTYNVIINGM 217
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C+E R +A Q++ +SS G Q D +Y +++ ++ ++ LF +M E +
Sbjct: 218 CREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNE 277
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
++ ++ E LD + E T N +I++ CK GR++DA L
Sbjct: 278 VTFDMLVRFFCRGGMVERAIEVLDRMSEHG-CTANTTLCNIVINSICKQGRVDDAFEFLN 336
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
M P+ +Y +++ G A + W + K ++ +K + F+
Sbjct: 337 NMGSYGCSPDTISYTTVLKGLCRAGR-------WEDAKELLNEMVRKNCPPNEVTFNTFI 389
Query: 594 YALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
L + G D + ++E+ E V Y
Sbjct: 390 CILCQKGLIDQAILLIEQMPEYGCSVGIVTY 420
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 160/405 (39%), Gaps = 66/405 (16%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+ + L+G C + D E + M PNE +F L + G+ E+ +
Sbjct: 239 QPDTVSYTTVLKGLCAA-KRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAI 297
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
E+ M+E G ++ + +I+ K G ++ A + NM S +T Y
Sbjct: 298 EVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFL------NNMGSYGCSPDTISYT 351
Query: 335 EVVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
V+KG + G + K L N ++ + P+ + + I GL D+A ++
Sbjct: 352 TVLKGLCRAGRWEDAKELLNEMVR-KNCPPNEVTFN-----TFICILCQKGLIDQAILLI 405
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++M GCSVG+ Y + +C + R A +L + +IT
Sbjct: 406 EQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE-------------PNTIT- 451
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-DPRVEVKTH 510
Y T++TGL R + A L E+++ D + V T
Sbjct: 452 ------------------------YTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVT- 486
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+N ++ FC+ G +E+A +++M+ PN T+ +L++G L + H +
Sbjct: 487 -FNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGL 545
Query: 571 KRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEM 615
KGI + + + L + + +Q+ Q+M
Sbjct: 546 V-------SKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDM 583
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 131/336 (38%), Gaps = 47/336 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ + L+G C DA++++ M PNE +F + KGL ++ +
Sbjct: 345 PDTISYTTVLKGLCRA-GRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAIL 403
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M E+G S +V Y++L++G+ G ++SA N + + TY ++
Sbjct: 404 LIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELF-------NSLPCEPNTITYTTLL 456
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + A L+ E + + VV +V ++S G ++A ++ +M
Sbjct: 457 TGLCHAERLDAAAELLAEMMQNDCPLNVVTFNV---LVSFFCQKGFVEEAIELVQQMMEH 513
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC+ L + L ++ + EA +L+ + S G+ LD Y ++++ + A
Sbjct: 514 GCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEA 573
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+F V+D + K +N I+
Sbjct: 574 VQMF------------------------------------HAVQDMGMRPKAVMYNKILS 597
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A CK + A M+ PN+ TY+ LI G
Sbjct: 598 ALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEG 633
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 167/411 (40%), Gaps = 43/411 (10%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL--------AYLYA 267
+ P+ Y + G C V DA +++ M +P+ ++ L + A
Sbjct: 133 VPPDAYTYTPLIRGLC-DRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQA 191
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
+K L E M G + +V Y+ +I+G + ++ A R IL +
Sbjct: 192 MKVLDE--------MRAKGCTPNIVTYNVIINGMCREDRVDDA-RQIL-----NRLSSYG 237
Query: 328 FSKET--YCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGL 383
F +T Y V+KG + + L E P+ + D V F G+
Sbjct: 238 FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRG-----GM 292
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
++A +LD M+ GC+ + + + CK+ R +A + + ++ S G D +Y
Sbjct: 293 VERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTT 352
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
+++ + ++ A L +M + ++ T + L + + A L E + +
Sbjct: 353 VLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLID-QAILLIEQMPEY 411
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
V +N++++ FC GR++ A L L EPN TY +L+ G AE+ +
Sbjct: 412 GCSVGIVTYNALVNGFCVQGRVDSA---LELFNSLPCEPNTITYTTLLTGLCHAERLDAA 468
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+ E+ + D + + LV F + GF + +++V++ E
Sbjct: 469 AELLAEM---MQNDCPLNVVTFNVLVSFF----CQKGFVEEAIELVQQMME 512
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 104/252 (41%), Gaps = 58/252 (23%)
Query: 405 VYVPT--LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
VY+ T ++ C+ RT++A +++ SG +DV Y+ L+ +A L
Sbjct: 70 VYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIA 129
Query: 463 DMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE------------------------ 498
M + +Y ++ GL + R + LD+
Sbjct: 130 SM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSS 186
Query: 499 -------VVEDPRVEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
V+++ R + T + +N II+ C+ R++DA++ L R+ F+P+ +Y
Sbjct: 187 GFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYT 246
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV------DAFLYALVKGGFF 602
+++ G A+++ V +++ E+ E+N V D + +GG
Sbjct: 247 TVLKGLCAAKRWEDVEVLFCEM-------------VENNCVPNEVTFDMLVRFFCRGGMV 293
Query: 603 DAVMQVVEKSQE 614
+ ++V+++ E
Sbjct: 294 ERAIEVLDRMSE 305
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 190/485 (39%), Gaps = 62/485 (12%)
Query: 205 CRIALDEN-LDFMKP--------NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
CR+ E+ LDF++ N+Y NA + G C + +A KV+E M G+ P+
Sbjct: 301 CRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKK-GELDEALKVLEEMKSCGISPD 359
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
++ L + + +G EK + L M +V YSSL G K L S I
Sbjct: 360 VYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCK-KRLSDISLDIF 418
Query: 316 LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK--LEP------------ 361
LG + + + Y ++KGF G++ L+ E + L P
Sbjct: 419 RDLGAAGYK---YDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGF 475
Query: 362 ------------------SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
GI+ + II A G ++A ++++EM G L
Sbjct: 476 CKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNL 535
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y + CKE ++ A +L + + V Y LI+ + Q A L+
Sbjct: 536 FTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYAR 595
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAF--LDEVVEDPRVEVKTHDWNSIIHAFCK 521
M + + +Y TI+ ++ HR + A+ ++ E+ K + S+I FC+
Sbjct: 596 MLKIGVTPDMVAY-TILINIL-CHRSRMCEAYNLFKKMTENGMTPDKI-SYTSVIAGFCR 652
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKG 581
G + A M+ P TY SL++GY + M+ E+KR KG
Sbjct: 653 IGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKR-------KG 705
Query: 582 IKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLR 641
I + + + A + G D ++++ + +E V D Y M LK KL+
Sbjct: 706 ITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY----MMLEWLLKAKKLK 761
Query: 642 KRNFK 646
R K
Sbjct: 762 TRRSK 766
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 151/401 (37%), Gaps = 67/401 (16%)
Query: 142 FQTVHTLLGSMRNANTAAPAFALVK---CMFKNRYFMPFELWGGFL---VDICRKNSNFV 195
F+TV +L A +AL++ C + FEL+ L D R F
Sbjct: 127 FRTVVNVLAL---AGMHMEVYALLRDIVCYYNKVNLDAFELFPILLESPKDAARSVIVFD 183
Query: 196 AFLKVFEECCRIALDENLD-FMKPNIYACNAALEGCCYGLQSVSDAEK------VIETMS 248
+KVF L+ +D F++ + C + L+ +++A + + E M
Sbjct: 184 LLIKVFAA--NSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMK 241
Query: 249 VLGVRPNESSFGFLAYLYALKGLQE------KIVELESLMNEFGFSSQMVFYSSLISGYV 302
G PN ++ + Y E + E+ M G S +V YS+ I G
Sbjct: 242 STGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLC 301
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
++G +ESA DF + L + N GL N+
Sbjct: 302 RVGYVESAL---------------DFVRS---------LISAN--GLVNVYCYN------ 329
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
II G D+A +L+EM +CG S + Y + +CK+ +
Sbjct: 330 ----------AIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKG 379
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
L+ ++ S ++ + +Y +L + + +FRD+ A + +Y ++ G
Sbjct: 380 LYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKG 439
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
+ ++E+V + + ++ S++H FCK G
Sbjct: 440 FCMQGDLDSAHKLMEEMVRN-NLAPDPSNFESLVHGFCKMG 479
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 146/353 (41%), Gaps = 41/353 (11%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
V+ + SFG + G +K E+ M E G S +V Y++LI G K G++E
Sbjct: 160 VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERG- 218
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
+ + +G ++ + + TY ++ GF + G K L +K++ +GIV +
Sbjct: 219 KQLFYKMGELDVVANQY---TYTVLINGFFKMGLKKDGIELY---EKMKLTGIVPNVYTY 272
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
+I C N G + A + DEM G + + Y + C+E R EA +L+ +
Sbjct: 273 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 332
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP-- 489
GL ++ +Y+ LI+ + + A SLF M+ + +Y ++ G E
Sbjct: 333 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAG 392
Query: 490 ------ELMA-----------AFLDEVVEDPRVE---------------VKTHDWNSIIH 517
E+ A +D +V +E + + +IH
Sbjct: 393 VTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIH 452
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
C G +++A + + + + +PND Y ++I GY + L + E+
Sbjct: 453 GLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEM 505
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 155/378 (41%), Gaps = 44/378 (11%)
Query: 196 AFLKVFEECCRIA-LDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKVIET 246
+F + + CC + LD+ + + PN+ ++GCC + +++
Sbjct: 166 SFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN-GDIERGKQLFYK 224
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
M L V N+ ++ L + GL++ +EL M G + Y+S+I G
Sbjct: 225 MGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGK 284
Query: 307 LESASRTILLCLGGGNMEQSDFSKE--------TYCEVVKGFLQNGNVKGLANLIIEAQK 358
L +A E D +E TY ++ G Q V L+ ++
Sbjct: 285 LNNA------------FELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 332
Query: 359 --LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
L P+ I + +I ++G DKA S+ ++M + G S L Y + + +
Sbjct: 333 DGLSPNLISYNT-----LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEA 387
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+A T +V ++ + GL Y L++A + S + + AF ++ M +A + Y
Sbjct: 388 KNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIY 447
Query: 477 LTIMTGL-MENHRPELMAAF--LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
++ GL + E F LDE+ P + +N++I+ +CK G A R L+
Sbjct: 448 GVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVI----YNTMIYGYCKEGSSYRALRLLK 503
Query: 534 RMIFLQFEPNDQTYLSLI 551
M PN +Y S I
Sbjct: 504 EMGENGMVPNVASYNSTI 521
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 133/335 (39%), Gaps = 62/335 (18%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKI 275
PN+Y N+ + CC +++A ++ + M GV N ++ L + GL + ++
Sbjct: 267 PNVYTYNSMICRCCND-GKLNNAFELFDEMRERGVACNVVTYNTL-----IGGLCQERRV 320
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
+E E LM G S ++ Y++LI GY +GNL+ AS M+ S S
Sbjct: 321 LEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLF------NQMKSSGQSPSL 374
Query: 332 -TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY ++ GF + N G+ +++ +EA+ L PS +
Sbjct: 375 ATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVT----------------------- 411
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
Y + A + +A Q+ + +GL D+ Y LI
Sbjct: 412 -----------------YTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGL 454
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
D + A LF+ + E + Y T++ G + L E+ E+ V
Sbjct: 455 CVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVP-N 513
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+NS I CK + +A+ L+ MI L +P+
Sbjct: 514 VASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPS 548
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 106/289 (36%), Gaps = 44/289 (15%)
Query: 372 FGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV---- 426
FGI I C +G DK +L +M G S + VY + CK QL
Sbjct: 167 FGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMG 226
Query: 427 --------------------MDISSSGLQL-----------DVGNYDALIEASITSQDFQ 455
M + G++L +V Y+++I
Sbjct: 227 ELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLN 286
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+AF LF +MRE + +Y T++ GL + R L A L ++ + +N++
Sbjct: 287 NAFELFDEMRERGVACNVVTYNTLIGGLCQERRV-LEAERLMCRMKRDGLSPNLISYNTL 345
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I +C G L+ A +M P+ TY LI G+ A+ V M E++
Sbjct: 346 IDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREME---- 401
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+G+ + ALV+ + Q+ ++ + D + Y
Sbjct: 402 ---ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIY 447
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 104/238 (43%), Gaps = 16/238 (6%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PN+ + N ++G C + ++ A + M G P+ +++ L ++
Sbjct: 333 DGLSPNLISYNTLIDGYC-SIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSA 391
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ ++ M G S V Y+ L+ V+ N+E A + +ME++ + Y
Sbjct: 392 GVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIY------SSMEKAGLVADIY 445
Query: 334 CE--VVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
++ G G++K + L ++ L+P+ ++ + +I G S +A
Sbjct: 446 IYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNT-----MIYGYCKEGSSYRALR 500
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+L EM G + Y T++ CK+ + EA L+ D+ GL+ + ++ + +A
Sbjct: 501 LLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 558
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 166/399 (41%), Gaps = 51/399 (12%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ + N + C + + +A + E M+ GV+P ++ L Y + G ++ V+
Sbjct: 384 PDAFTYNILIHWLCQ-RRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVK 442
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS--KETYCE 335
L + M GF+ +V Y++L+ G++ + A + M+Q+ S TY
Sbjct: 443 LYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALL------AEMKQNGVSCNDYTYNT 496
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G G V + ++ ++ E G V II+ + G+ A ++ +M
Sbjct: 497 LINGLCVVGRVCEVGEML---KRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI-----EASIT 450
A G + Y + YCK A +++ D+ GL+ D+ Y++LI E +++
Sbjct: 554 AKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMS 613
Query: 451 S--------------------QDFQSAFSLFRDMREA-RIY--------DLK-GSYLTIM 480
F + + + M EA R+Y DL +Y T++
Sbjct: 614 HALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLI 673
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTH-DWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
G ++ E+V + + H + ++ H C+ G ++DA++ L M L
Sbjct: 674 DGFSKDGNVTFALKLYSEMVA--KGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLD 731
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTD 577
PN Y LINGY+ + + E ++RKI D
Sbjct: 732 IRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPD 770
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 185/464 (39%), Gaps = 45/464 (9%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+ C+ A+ C L+ + A V+ M G P + +F + + G E+
Sbjct: 208 IEPDQRVCSVAIASLC-KLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEA 266
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-----------------SRTILL-- 316
+ ++ + G +V ++L+ GY + A + T+L+
Sbjct: 267 LHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRG 326
Query: 317 CLGGGNMEQS--------DF----SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
C G E++ D S + V+KG L + K +L E + SGI
Sbjct: 327 CTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKE---MADSGI 383
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ I C + + A ++ ++MN G + Y L YC EA +
Sbjct: 384 PDAFTYNILIHWLCQRRKIRE-ALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVK 442
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L ++ G +V Y L++ I F A++L +M++ + +Y T++ GL
Sbjct: 443 LYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLC 502
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
R + L + V +NSII+ F KAG + A ++M PN
Sbjct: 503 VVGRVCEVGEMLKRFETEGFVPT-AMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNI 561
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDA 604
TY S I+GY L M ++++ KG++ + ++ ++ + G
Sbjct: 562 VTYTSFIDGYCKTSCCDLALKMLNDVR-------CKGLRPDIAAYNSLIFGFCQEGNMSH 614
Query: 605 VMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKM 648
+QV+ + + + Y +F+ +K LK+ + R ++KM
Sbjct: 615 ALQVLVLMLKDGLLPNISVY-NSFITGYKNLKMMEEALRLYEKM 657
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 151/365 (41%), Gaps = 28/365 (7%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFA---SVVYVIEKNPKLLD 141
DEA K + + P K T +++ + ++L H K AF +++ +++N +
Sbjct: 438 DEAVKLYTEM------PGKGFTPNVVTY-TTLMKGHINKAAFDKAYALLAEMKQNGVSCN 490
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
T +TL+ + ++K F+ F+P + +++ K + V+
Sbjct: 491 DYTYNTLINGLCVVGRVCEVGEMLK-RFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVY 549
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD-AEKVIETMSVLGVRPNESSFG 260
++ C + PNI + ++G C S D A K++ + G+RP+ +++
Sbjct: 550 QQMCAKGI-------PPNIVTYTSFIDGYCK--TSCCDLALKMLNDVRCKGLRPDIAAYN 600
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L + + +G +++ LM + G + Y+S I+GY L +E A R +
Sbjct: 601 SLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIK- 659
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
E D TY ++ GF ++GNV L E + G + D +
Sbjct: 660 ---EGIDLDTATYTTLIDGFSKDGNVTFALKLYSE---MVAKGNIPDHITFTALTHGLCR 713
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G D A +LDEMN + +Y + Y + + EA +L ++ + D
Sbjct: 714 NGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTT 773
Query: 441 YDALI 445
YD L+
Sbjct: 774 YDILV 778
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 168/391 (42%), Gaps = 24/391 (6%)
Query: 191 NSNFVAFLK--VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMS 248
NS +LK ++EE ++ DE +D NI+ N + C G + +A +++ M
Sbjct: 399 NSLLRGYLKAPLWEEASKL-FDEAVDCGVANIFTYNIMMSWLCKG-GKMDEACSLLDNMV 456
Query: 249 VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLE 308
G+ PN S+ + + KG + + S M +V YS LI G K G+ E
Sbjct: 457 NQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSE 516
Query: 309 SASRTI--LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK----GLANLIIEAQKLEPS 362
A +L L N+ +DF T+ ++ G + G + L N + E PS
Sbjct: 517 KALDLFDQMLSL---NIAPTDF---TFNTIINGLCKVGQMSEARDKLKNFLEEG--FIPS 568
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
+ + I+ + G D A ++ EM G S + Y + +CK +R A
Sbjct: 569 CMTYN-----SIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 623
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+ ++ GL+LDV Y ALI+ +D +SA LF ++ E + + Y ++++G
Sbjct: 624 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG 683
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
+ + E + +++ D R+ + ++I K GRL A M+ P
Sbjct: 684 FRDLNNMEAALVWYKKMIND-RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 742
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ T+ L+NG Q + + E+ RK
Sbjct: 743 DIITFHVLVNGLCNKGQLENARKILEEMDRK 773
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 151/362 (41%), Gaps = 34/362 (9%)
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
+++E M G P+E++F + +G + + L+ M G +V +SL+ GY
Sbjct: 276 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 335
Query: 302 VKLGNLESA-----------------SRTILL--CLGGGNMEQSDFSKETYCEVVKGFLQ 342
GNL+SA + ++L+ C GN+E+ + E Y ++ +
Sbjct: 336 CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEK---ASELYTQMKLNGIP 392
Query: 343 NG--NVKGLANLIIEAQKLEPSGIVVDRSVGFGI---------ISACVNLGLSDKAHSIL 391
NV L ++A E + + D +V G+ +S G D+A S+L
Sbjct: 393 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLL 452
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
D M G + Y + +C++ A+ + D+ + L+ +V Y LI+ +
Sbjct: 453 DNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKK 512
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
D + A LF M I ++ TI+ GL + + L +E+ +
Sbjct: 513 GDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP-SCMT 571
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+NSI+ F K G ++ A R M PN TY SLING+ + + L E++
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 631
Query: 572 RK 573
K
Sbjct: 632 EK 633
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 145/340 (42%), Gaps = 11/340 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M PN+ + N + G C ++ A V M ++PN ++ L KG EK
Sbjct: 460 MVPNVVSYNDMILGHCRK-GNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKA 518
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++L M + ++++I+G K+G + A + L G + S TY
Sbjct: 519 LDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP----SCMTYNS 574
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+V GF++ GN+ + E + S VV + +I+ D A DEM
Sbjct: 575 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYT---SLINGFCKSNRIDLALKTRDEMR 631
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + + Y + +CK A L ++ GL + Y+++I + +
Sbjct: 632 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 691
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-EVKTHDWNS 514
+A ++ M RI G+Y T++ GL++ R + E++ V ++ T ++
Sbjct: 692 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIIT--FHV 749
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+++ C G+LE+A++ L M P+ Y +LI GY
Sbjct: 750 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGY 789
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 149/373 (39%), Gaps = 40/373 (10%)
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
C V +AE+ GV+ + ++ + K +EL M E G+
Sbjct: 230 CLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPS 289
Query: 291 MVFYSSLISGYVKLGNLESASR--------------TILLCLGGGNMEQSDF-------- 328
++S+I V GN+ A R + L G Q +
Sbjct: 290 EATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFN 349
Query: 329 ---------SKETYCEVVKGFLQNGNVKGLANLIIEAQ--KLEPSGIVVDRSVGFGIISA 377
+K TY +++G +GN++ + L + + + PS V+ ++
Sbjct: 350 KITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVN-----SLLRG 404
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
+ L ++A + DE CG + + Y + CK + EA L+ ++ + G+ +
Sbjct: 405 YLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPN 463
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
V +Y+ +I + A S+F DM + +Y ++ G + E D
Sbjct: 464 VVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFD 523
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+++ + +N+II+ CK G++ +A+ L+ + F P+ TY S+++G++
Sbjct: 524 QMLS-LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKE 582
Query: 558 EQYFSVLMMWHEI 570
S L ++ E+
Sbjct: 583 GNIDSALAVYREM 595
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 15/274 (5%)
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG 233
F+P + +VD K N + L V+ E C + PN+ + + G C
Sbjct: 565 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGV-------SPNVVTYTSLINGFCKS 617
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
+ A K + M G+ + +++ L + + E +L + E G S +
Sbjct: 618 -NRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV 676
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y+S+ISG+ L N+E+A L+ ++ TY ++ G L+ G + ++L
Sbjct: 677 YNSMISGFRDLNNMEAA----LVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLY 732
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+E + GIV D +++ N G + A IL+EM+ + + +Y + Y
Sbjct: 733 ME---MLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGY 789
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+E EA L ++ GL D YD LI
Sbjct: 790 FREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 104/260 (40%), Gaps = 21/260 (8%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
K+ GI D ++ AC+ G ++A E G + G Y ++A CK+
Sbjct: 209 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 268
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+ +L+ ++ G + ++I A + + A L +E I K
Sbjct: 269 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRL----KEEMINCGKPMN 324
Query: 477 LTIMTGLMENH--RPELMAA--FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
L + T LM+ + + L +A +++ ED K ++ +I C +G +E A
Sbjct: 325 LVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKV-TYSVLIEGCCNSGNIEKASELY 383
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIK--FEHNLVD 590
+M P+ SL+ GY+ A +W E + G+ F +N++
Sbjct: 384 TQMKLNGIPPSVFNVNSLLRGYLKAP-------LWEEASKLFDEAVDCGVANIFTYNIMM 436
Query: 591 AFLYALVKGGFFDAVMQVVE 610
++ L KGG D +++
Sbjct: 437 SW---LCKGGKMDEACSLLD 453
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 113/526 (21%), Positives = 205/526 (38%), Gaps = 41/526 (7%)
Query: 56 QQQQQQTLTQDNIT--SLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHL 113
+ + L D++T S+ L K+ N DEA + F+ L N P N++I
Sbjct: 289 HEMKSHGLMPDDVTYTSMIGVLCKA---NRLDEAVELFEQLEQNRKVPCAYAYNTMIMGY 345
Query: 114 SS---LQDNHNL---KRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKC 167
S + + L ++A S+ P ++ + + T LG R A F +K
Sbjct: 346 GSAGKFDEAYGLLERQKAKGSI-------PSVIAYNCILTCLGKKRRVEEALRIFEEMK- 397
Query: 168 MFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAAL 227
R +P L+D+ + A L++ ++ R L PN+ N +
Sbjct: 398 ----RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGL-------FPNVLTVNIMI 446
Query: 228 EGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGF 287
+ C Q + +A + E M PN +F L G + L M + G
Sbjct: 447 DRLCKA-QKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGH 505
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS-KETYCEVVKGFLQNGNV 346
+ Y+SLI + K G E + + G D + TY + V F
Sbjct: 506 VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGC--SPDLTLINTYMDCV--FKAGETE 561
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
KG A +++ G + D +I V GL+++ + + M GC + Y
Sbjct: 562 KGRALF----REINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAY 617
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ +CK + +A QL+ ++ G V Y ++I+ A+ LF + +
Sbjct: 618 NAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 677
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
I Y +++ G + R + ++E+++ + + WN ++ A KA +
Sbjct: 678 NGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKG-LTPNVYTWNCLLDALVKAEEIN 736
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+A + M L+ PN TY LING ++ + W E+++
Sbjct: 737 EALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQK 782
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 119/277 (42%), Gaps = 26/277 (9%)
Query: 349 LANLIIEAQKLEPS---------GIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACG 398
+ + + +AQKLE + + +V F +I G D A+S+ ++M CG
Sbjct: 445 MIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG 504
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
G VY ++++ K R + ++ ++ +G D+ + ++ + + +
Sbjct: 505 HVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGR 564
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLME----NHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
+LFR++ SY ++ GL++ N EL A +++ + TH +N+
Sbjct: 565 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYA-----MKEQGCVLDTHAYNA 619
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+I FCK+G++ A + L M P TY S+I+G ++ M++ E K
Sbjct: 620 VIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK--- 676
Query: 575 STDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
GIK + + + K G D ++E+
Sbjct: 677 ----SNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 709
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 168/391 (42%), Gaps = 24/391 (6%)
Query: 191 NSNFVAFLK--VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMS 248
NS +LK ++EE ++ DE +D NI+ N + C G + +A +++ M
Sbjct: 439 NSLLRGYLKAPLWEEASKL-FDEAVDCGVANIFTYNIMMSWLCKG-GKMDEACSLLDNMV 496
Query: 249 VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLE 308
G+ PN S+ + + KG + + S M +V YS LI G K G+ E
Sbjct: 497 NQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSE 556
Query: 309 SASRTI--LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK----GLANLIIEAQKLEPS 362
A +L L N+ +DF T+ ++ G + G + L N + E PS
Sbjct: 557 KALDLFDQMLSL---NIAPTDF---TFNTIINGLCKVGQMSEARDKLKNFLEEG--FIPS 608
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
+ + I+ + G D A ++ EM G S + Y + +CK +R A
Sbjct: 609 CMTYN-----SIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 663
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+ ++ GL+LDV Y ALI+ +D +SA LF ++ E + + Y ++++G
Sbjct: 664 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG 723
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
+ + E + +++ D R+ + ++I K GRL A M+ P
Sbjct: 724 FRDLNNMEAALVWYKKMIND-RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 782
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ T+ L+NG Q + + E+ RK
Sbjct: 783 DIITFHVLVNGLCNKGQLENARKILEEMDRK 813
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 151/362 (41%), Gaps = 34/362 (9%)
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
+++E M G P+E++F + +G + + L+ M G +V +SL+ GY
Sbjct: 316 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 375
Query: 302 VKLGNLESA-----------------SRTILL--CLGGGNMEQSDFSKETYCEVVKGFLQ 342
GNL+SA + ++L+ C GN+E+ + E Y ++ +
Sbjct: 376 CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEK---ASELYTQMKLNGIP 432
Query: 343 NG--NVKGLANLIIEAQKLEPSGIVVDRSVGFGI---------ISACVNLGLSDKAHSIL 391
NV L ++A E + + D +V G+ +S G D+A S+L
Sbjct: 433 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLL 492
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
D M G + Y + +C++ A+ + D+ + L+ +V Y LI+ +
Sbjct: 493 DNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKK 552
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
D + A LF M I ++ TI+ GL + + L +E+ +
Sbjct: 553 GDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP-SCMT 611
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+NSI+ F K G ++ A R M PN TY SLING+ + + L E++
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 671
Query: 572 RK 573
K
Sbjct: 672 EK 673
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 145/340 (42%), Gaps = 11/340 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M PN+ + N + G C ++ A V M ++PN ++ L KG EK
Sbjct: 500 MVPNVVSYNDMILGHCRK-GNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKA 558
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++L M + ++++I+G K+G + A + L G + S TY
Sbjct: 559 LDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP----SCMTYNS 614
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+V GF++ GN+ + E + S VV + +I+ D A DEM
Sbjct: 615 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYT---SLINGFCKSNRIDLALKTRDEMR 671
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + + Y + +CK A L ++ GL + Y+++I + +
Sbjct: 672 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 731
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-EVKTHDWNS 514
+A ++ M RI G+Y T++ GL++ R + E++ V ++ T ++
Sbjct: 732 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIIT--FHV 789
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+++ C G+LE+A++ L M P+ Y +LI GY
Sbjct: 790 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGY 829
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 151/375 (40%), Gaps = 44/375 (11%)
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
C V +AE+ GV+ + ++ + K +EL M E G+
Sbjct: 270 CLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPS 329
Query: 291 MVFYSSLISGYVKLGNLESASR--------------TILLCLGGGNMEQSDF-------- 328
++S+I V GN+ A R + L G Q +
Sbjct: 330 EATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFN 389
Query: 329 ---------SKETYCEVVKGFLQNGNVKGLANLIIEAQ--KLEPSGIVVDRSVGFGIISA 377
+K TY +++G +GN++ + L + + + PS V+ ++
Sbjct: 390 KITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVN-----SLLRG 444
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
+ L ++A + DE CG + + Y + CK + EA L+ ++ + G+ +
Sbjct: 445 YLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPN 503
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
V +Y+ +I + A S+F DM + +Y ++ G + E D
Sbjct: 504 VVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFD 563
Query: 498 EVVEDPRVEVKTHD--WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+++ + + D +N+II+ CK G++ +A+ L+ + F P+ TY S+++G++
Sbjct: 564 QMLS---LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFI 620
Query: 556 TAEQYFSVLMMWHEI 570
S L ++ E+
Sbjct: 621 KEGNIDSALAVYREM 635
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 15/274 (5%)
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG 233
F+P + +VD K N + L V+ E C + PN+ + + G C
Sbjct: 605 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGV-------SPNVVTYTSLINGFCKS 657
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
+ A K + M G+ + +++ L + + E +L + E G S +
Sbjct: 658 -NRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV 716
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y+S+ISG+ L N+E+A L+ ++ TY ++ G L+ G + ++L
Sbjct: 717 YNSMISGFRDLNNMEAA----LVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLY 772
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+E + GIV D +++ N G + A IL+EM+ + + +Y + Y
Sbjct: 773 ME---MLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGY 829
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+E EA L ++ GL D YD LI
Sbjct: 830 FREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 102/254 (40%), Gaps = 21/254 (8%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
GI D ++ AC+ G ++A E G + G Y ++A CK+ +
Sbjct: 255 GIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLG 314
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+L+ ++ G + ++I A + + A L +E I K L + T
Sbjct: 315 LELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRL----KEEMINCGKPMNLVVATS 370
Query: 483 LMENH--RPELMAA--FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
LM+ + + L +A +++ ED K ++ +I C +G +E A +M
Sbjct: 371 LMKGYCAQGNLDSALNLFNKITEDGLFPNKV-TYSVLIEGCCNSGNIEKASELYTQMKLN 429
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIK--FEHNLVDAFLYAL 596
P+ SL+ GY+ A +W E + G+ F +N++ ++ L
Sbjct: 430 GIPPSVFNVNSLLRGYLKAP-------LWEEASKLFDEAVDCGVANIFTYNIMMSW---L 479
Query: 597 VKGGFFDAVMQVVE 610
KGG D +++
Sbjct: 480 CKGGKMDEACSLLD 493
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 146/353 (41%), Gaps = 41/353 (11%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
V+ + SFG + G +K E+ M E G S +V Y++LI G K G++E
Sbjct: 147 VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERG- 205
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
+ + +G ++ + + TY ++ GF + G K L +K++ +GIV +
Sbjct: 206 KQLFYKMGELDVVANQY---TYTVLINGFFKMGLKKDGIELY---EKMKLTGIVPNVYTY 259
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
+I C N G + A + DEM G + + Y + C+E R EA +L+ +
Sbjct: 260 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 319
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP-- 489
GL ++ +Y+ LI+ + + A SLF M+ + +Y ++ G E
Sbjct: 320 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAG 379
Query: 490 ------ELMA-----------AFLDEVVEDPRVE---------------VKTHDWNSIIH 517
E+ A +D +V +E + + +IH
Sbjct: 380 VTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIH 439
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
C G +++A + + + + +PND Y ++I GY + L + E+
Sbjct: 440 GLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEM 492
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 155/378 (41%), Gaps = 44/378 (11%)
Query: 196 AFLKVFEECCRIA-LDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKVIET 246
+F + + CC + LD+ + + PN+ ++GCC + +++
Sbjct: 153 SFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN-GDIERGKQLFYK 211
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
M L V N+ ++ L + GL++ +EL M G + Y+S+I G
Sbjct: 212 MGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGK 271
Query: 307 LESASRTILLCLGGGNMEQSDFSKE--------TYCEVVKGFLQNGNVKGLANLIIEAQK 358
L +A E D +E TY ++ G Q V L+ ++
Sbjct: 272 LNNA------------FELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 319
Query: 359 --LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
L P+ I + +I ++G DKA S+ ++M + G S L Y + + +
Sbjct: 320 DGLSPNLISYNT-----LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEA 374
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+A T +V ++ + GL Y L++A + S + + AF ++ M +A + Y
Sbjct: 375 KNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIY 434
Query: 477 LTIMTGL-MENHRPELMAAF--LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
++ GL + E F LDE+ P + +N++I+ +CK G A R L+
Sbjct: 435 GVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVI----YNTMIYGYCKEGSSYRALRLLK 490
Query: 534 RMIFLQFEPNDQTYLSLI 551
M PN +Y S I
Sbjct: 491 EMGENGMVPNVASYNSTI 508
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 133/335 (39%), Gaps = 62/335 (18%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKI 275
PN+Y N+ + CC +++A ++ + M GV N ++ L + GL + ++
Sbjct: 254 PNVYTYNSMICRCCND-GKLNNAFELFDEMRERGVACNVVTYNTL-----IGGLCQERRV 307
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
+E E LM G S ++ Y++LI GY +GNL+ AS M+ S S
Sbjct: 308 LEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLF------NQMKSSGQSPSL 361
Query: 332 -TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY ++ GF + N G+ +++ +EA+ L PS +
Sbjct: 362 ATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVT----------------------- 398
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
Y + A + +A Q+ + +GL D+ Y LI
Sbjct: 399 -----------------YTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGL 441
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
D + A LF+ + E + Y T++ G + L E+ E+ V
Sbjct: 442 CVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVP-N 500
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+NS I CK + +A+ L+ MI L +P+
Sbjct: 501 VASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPS 535
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 106/289 (36%), Gaps = 44/289 (15%)
Query: 372 FGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV---- 426
FGI I C +G DK +L +M G S + VY + CK QL
Sbjct: 154 FGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMG 213
Query: 427 --------------------MDISSSGLQL-----------DVGNYDALIEASITSQDFQ 455
M + G++L +V Y+++I
Sbjct: 214 ELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLN 273
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+AF LF +MRE + +Y T++ GL + R L A L ++ + +N++
Sbjct: 274 NAFELFDEMRERGVACNVVTYNTLIGGLCQERRV-LEAERLMCRMKRDGLSPNLISYNTL 332
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I +C G L+ A +M P+ TY LI G+ A+ V M E++
Sbjct: 333 IDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREME---- 388
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+G+ + ALV+ + Q+ ++ + D + Y
Sbjct: 389 ---ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIY 434
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 103/238 (43%), Gaps = 16/238 (6%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PN+ + N ++G C + ++ A + M G P+ +++ L ++
Sbjct: 320 DGLSPNLISYNTLIDGYC-SIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSA 378
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ ++ M G S V Y+ L+ V+ N+E A + +ME++ + Y
Sbjct: 379 GVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIY------SSMEKAGLVADIY 432
Query: 334 CE--VVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
++ G G++K + L ++ L+P+ ++ + +I G S +A
Sbjct: 433 IYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNT-----MIYGYCKEGSSYRALR 487
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+L EM G + Y T+ CK+ + EA L+ D+ GL+ + ++ + +A
Sbjct: 488 LLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 545
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 160/413 (38%), Gaps = 55/413 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ ++A+ C + +A ++ +M GV+PN + G E V+
Sbjct: 219 PDVLTYSSAIAACAK-VSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVD 277
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
L M G + ++ YS++I K G E A R ++ M TY
Sbjct: 278 LLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLM------EMPTKGVVANIITYSI 331
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V+ + G + L+ E Q+ +G+ D ISAC G ++A +L EM
Sbjct: 332 VIGACAKWGQWEEAVALLREMQE---NGVAPDVITYSSTISACAKKGQWEEAVGLLREMP 388
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y + A K R EA L+ ++ + G+ DV NY A I+A + ++
Sbjct: 389 MEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWE 448
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A L R+M TGL N +NS
Sbjct: 449 QALWLLREM--------------PATGLTPN----------------------VISYNSA 472
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I A K GR + A LR M P+ TY ++I Q+ L ++ E++R
Sbjct: 473 IDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQR--- 529
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAF 628
+GI + + + A +GG+++ + V+ + M + D Y+ A
Sbjct: 530 ----QGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAI 578
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 158/394 (40%), Gaps = 55/394 (13%)
Query: 185 VDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVI 244
+ CRK + + + +E + L P++ + ++ C Q A +++
Sbjct: 263 ISACRKGGQWETAVDLLKEMPAVGL-------APDVITYSTVIDACAKRGQ-WEPAFRLL 314
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
M GV N ++ + A G E+ V L M E G + ++ YSS IS K
Sbjct: 315 MEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKK 374
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
G E A + L ME + +Y V+ + G + +L+ Q+++ G+
Sbjct: 375 GQWEEA----VGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLL---QEMQAHGV 427
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
D I AC ++A +L EM A G + + Y + A K R+ A +
Sbjct: 428 PPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVE 487
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L+ ++ + GL DV Y A+I + + ++ A LFR+M+ I
Sbjct: 488 LLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGIT-------------- 533
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
P++++ N+ I+A + G E+A L M + P+
Sbjct: 534 ----PDVVSC------------------NTAINACAQGGWWEEALDVLGEMPTMGLVPDA 571
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
+Y + I+ +++ ++ ++ R++ST G
Sbjct: 572 ISYRTAIDACAKGDRWKEII----DLLREMSTVG 601
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 19/298 (6%)
Query: 185 VDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVI 244
+D C + S + L + E L PN+ + N+A++ C +S A +++
Sbjct: 438 IDACAQASRWEQALWLLREMPATGL-------TPNVISYNSAIDACAKTGRS-KIAVELL 489
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
M G+ P+ ++ + A+ E+ ++L M G + +V ++ I+ +
Sbjct: 490 REMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQG 549
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
G E A + G M + +Y + + K + +L+ E +
Sbjct: 550 GWWEEALDVL------GEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTV--- 600
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G+ D +SAC GL +A +L +M A G S + Y + A K R EA
Sbjct: 601 GLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEA 660
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
T L+ + + GL DV +++A I+A + +A + +MR + + +YLT M
Sbjct: 661 TVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAM 718
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 145/399 (36%), Gaps = 65/399 (16%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
+EE + + + + P++ ++ + C Q +A ++ M + GV PN S+G
Sbjct: 342 WEEAVALLREMQENGVAPDVITYSSTISACAKKGQ-WEEAVGLLREMPMEGVTPNAISYG 400
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
+ A +G + ++L M G ++ YS+ I + E A +
Sbjct: 401 IVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPAT 460
Query: 321 G--------NMEQSDFSKETYCEVVKGFLQNGNVKGLANLII----------------EA 356
G N +K ++ L+ GLA +I EA
Sbjct: 461 GLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEA 520
Query: 357 ----QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
++++ GI D I+AC G ++A +L EM G Y + A
Sbjct: 521 LDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDA 580
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
K R E L+ ++S+ GL D +Y + A ++ A L RDM
Sbjct: 581 CAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDM-------- 632
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
L +VV +NS I+A K GR ++A L
Sbjct: 633 ------------------LAVGLSPDVVT----------YNSAINACAKGGRWKEATVLL 664
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
R+M P+ ++ + I+ +Q+ + + + E++
Sbjct: 665 RQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMR 703
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 153/347 (44%), Gaps = 14/347 (4%)
Query: 211 ENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALK 269
E LD+ PN+Y N + G C + V +A V + +S G+RP+ SF L Y
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFC-KIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRS 274
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
E+ L+S+M S + YS+LI+G K +E A+ G +
Sbjct: 275 KNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNG--- 331
Query: 330 KETYCEVVKGFLQNGNVK-GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
T+ ++ G ++G + L N I ++ GI D +I+ G +A
Sbjct: 332 -VTFTTLIDGQCKHGKIDLALRNFEI----MKDRGIRPDLITYNALINGLCRDGDLKEAR 386
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+L+EM G + + CK+ A ++ + G++LD + ALI
Sbjct: 387 KLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGL 446
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE-V 507
+ A + +DM A +Y ++ + ++ A L E+ D RV V
Sbjct: 447 CRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGV 506
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
T +N++++ FCK G++++AK L M+ ++ PND T+ L++G+
Sbjct: 507 VT--YNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGH 551
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 171/403 (42%), Gaps = 31/403 (7%)
Query: 213 LDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
L + PN+ + N + G C Q + + +++E MS P+ +F L Y G
Sbjct: 266 LKGLNPNLISYNVVINGLCREGQ-MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNF 324
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SK 330
+ + L + M + G S +V Y++LI+ K GNL A + M +
Sbjct: 325 HQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL------DQMRDRGLHPNG 378
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY ++ GF Q G +K ++ E P+ I + +I+ LG + A
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYN-----ALINGHCILGRMEDAS 433
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+L EM G + Y + +C+ +A QL +++ + G+ DV Y +LI+
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRV 505
+ LF++M + + +Y +++ + DE+++ P +
Sbjct: 494 CKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDI 553
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE------- 558
+N +I+ F K R ++AKR L ++++ + PN+ TY +LI+ E
Sbjct: 554 VT----YNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALAL 609
Query: 559 -QYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
+ F + + +E R + + QKG K + + ++ K G
Sbjct: 610 MKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVG 652
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 171/441 (38%), Gaps = 68/441 (15%)
Query: 188 CRKNSNF------VAFLKVFEECCRIAL----------DENLDFMKPNIYACNAALEGCC 231
C KNS + F V + C R+ L ++ FM P + + NA L+
Sbjct: 120 CLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFM-PGVLSYNAILDAVI 178
Query: 232 YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQM 291
QSV AE + + M GV PN ++ L + G E + M G +
Sbjct: 179 RTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNV 238
Query: 292 VFYSSLISGYVKLGNLESASRTI-LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
V Y+++I Y KL + A + + L+ L G N +Y V+ G + G +K +
Sbjct: 239 VTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLI-----SYNVVINGLCREGQMKETS 293
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
++ E K V DR +I+ N+G +A + EM G S + Y +
Sbjct: 294 EILEEMSKRR---YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLI 350
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE---- 466
+ CK A + + + GL + Y LI+ + A+ + ++M E
Sbjct: 351 NSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFT 410
Query: 467 ----------------ARIYDLKG---------------SYLTIMTGLMENHRPELMAAF 495
R+ D G SY TI++G N EL AF
Sbjct: 411 PTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ--ELEKAF 468
Query: 496 ---LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++ V + +V T ++S+I CK RL + + M+ L P++ TY SLIN
Sbjct: 469 QLKVEMVAKGISPDVAT--YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLIN 526
Query: 553 GYVTAEQYFSVLMMWHEIKRK 573
Y L + E+ +K
Sbjct: 527 AYCIEGDLDKALRLHDEMIQK 547
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 172/422 (40%), Gaps = 53/422 (12%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
N+ + T ++ N + A + + L P+ +LI S LK+A+
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFS---QQGFLKQAY 398
Query: 127 ASVVYVIEK--NPKLLDFQTV---HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWG 181
+ ++E P ++ + + H +LG M +A+ L++ M + + +
Sbjct: 399 QIMKEMVENGFTPTIITYNALINGHCILGRMEDAS------GLLQEMIERGFIPDVVSYS 452
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
+ CR E+ ++ ++ + P++ ++ ++G C + + +
Sbjct: 453 TIISGFCRNQE--------LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQ-RRLGEVC 503
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
+ + M LG+ P+E ++ L Y ++G +K + L M + GFS +V Y+ LI+G+
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV---------------KGFLQNGNV 346
K + A R +L L E+S ++ TY ++ KGF +
Sbjct: 564 NKQSRTKEAKRLLLKLL----YEESVPNEITYNTLIDNCNNLEFKSALALMKGFC----M 615
Query: 347 KGLANLIIEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
KGL N EA ++ S G ++ V II +G +KA+++ EM G +
Sbjct: 616 KGLMN---EADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPH 672
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+ K+ E + E QL+ S + LI + + + F++ +
Sbjct: 673 SVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLK 732
Query: 463 DM 464
DM
Sbjct: 733 DM 734
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 174/396 (43%), Gaps = 52/396 (13%)
Query: 221 YACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELE 279
Y+ N +EG C GL +A V + M G+ P S++ Y+ AL +I +
Sbjct: 345 YSFNPLIEGYCKQGL--FDEAWGVTDEMLNAGIYPTTSTYNI--YIRALCEFG-RIDDAR 399
Query: 280 SLMNEFGFSSQMVFYSSLISGYVKL---------------GNLESASRTILLCLGG---- 320
L++ + +V Y++L+ GY+K+ GN+ + T + G
Sbjct: 400 ELLSSMA-APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCES 458
Query: 321 GNMEQSDFSKE------------TYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIV- 365
GN+E + KE TY ++KGF++NGN+ + E + ++P G
Sbjct: 459 GNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAY 518
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV-GLGVYVPTLKAYCKEHRTAEATQ 424
R+VG + LG S+KA + +EM A L +Y + CK +A +
Sbjct: 519 TTRTVG------ELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIE 572
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
I GL D Y +I + F+ A L+ +M R+ +Y ++ G
Sbjct: 573 FQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHA 632
Query: 485 ENHRPELMAAFLDEVVEDP-RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+ R E + E+ + R V TH N+++H CKAG +++A R L +M PN
Sbjct: 633 KAGRLEQAFQYSTEMKKRGVRPNVMTH--NALLHGMCKAGNIDEAYRYLCKMEEEGISPN 690
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTDG 578
+Y LI+ + +++ V+ ++ E + ++I DG
Sbjct: 691 KYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDG 726
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 182/475 (38%), Gaps = 85/475 (17%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ CN L + ++ A++V ETM + G+ P +F + G E++ +
Sbjct: 237 PSVRNCNIVLR-VLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDK 295
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC--E 335
+ M V Y+ LI+G+ K G +E A R G+M++S F Y
Sbjct: 296 IWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRF------HGDMQRSGFPVTPYSFNP 349
Query: 336 VVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+++G+ + G G+ + ++ A GI S I A G D A +L
Sbjct: 350 LIEGYCKQGLFDEAWGVTDEMLNA------GIYPTTSTYNIYIRALCEFGRIDDARELLS 403
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M A + Y + Y K + EA+ L D+ + + + Y+ LI+ S
Sbjct: 404 SMAA----PDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESG 459
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE----------- 501
+ + A L +M IY +Y T++ G ++N + DE++
Sbjct: 460 NLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYT 519
Query: 502 ----------DPRVEVKTHD--------------WNSIIHAFCKAGRLEDAKRTLRRMIF 537
D + H+ +N I CK G LE A R++
Sbjct: 520 TRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFR 579
Query: 538 LQFEPNDQTYLSLINGYVTAEQY---------------------FSVLMMWH------EI 570
+ P+ TY ++I GY+ ++ + VL+ H E
Sbjct: 580 VGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQ 639
Query: 571 KRKISTDGQK-GIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ ST+ +K G++ +A L+ + K G D + + K +E + +K+ Y
Sbjct: 640 AFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSY 694
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 171/403 (42%), Gaps = 31/403 (7%)
Query: 213 LDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
L + PN+ + N + G C Q + + +++E MS P+ +F L Y G
Sbjct: 266 LKGLNPNLISYNVVINGLCREGQ-MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNF 324
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SK 330
+ + L + M + G S +V Y++LI+ K GNL A + M +
Sbjct: 325 HQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL------DQMRDRGLHPNG 378
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY ++ GF Q G +K ++ E P+ I + +I+ LG + A
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYN-----ALINGHCILGRMEDAS 433
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+L EM G + Y + +C+ +A QL +++ + G+ DV Y +LI+
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRV 505
+ LF++M + + +Y +++ + DE+++ P +
Sbjct: 494 CKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDI 553
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE------- 558
+N +I+ F K R ++AKR L ++++ + PN+ TY +LI+ E
Sbjct: 554 VT----YNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALAL 609
Query: 559 -QYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
+ F + + +E R + + QKG K + + ++ K G
Sbjct: 610 MKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVG 652
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 171/441 (38%), Gaps = 68/441 (15%)
Query: 188 CRKNSNF------VAFLKVFEECCRIAL----------DENLDFMKPNIYACNAALEGCC 231
C KNS + F V + C R+ L ++ FM P + + NA L+
Sbjct: 120 CLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFM-PGVLSYNAILDAVI 178
Query: 232 YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQM 291
QSV AE + + M GV PN ++ L + G E + M G +
Sbjct: 179 RTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNV 238
Query: 292 VFYSSLISGYVKLGNLESASRTI-LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
V Y+++I Y KL + A + + L+ L G N +Y V+ G + G +K +
Sbjct: 239 VTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLI-----SYNVVINGLCREGQMKETS 293
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
++ E K V DR +I+ N+G +A + EM G S + Y +
Sbjct: 294 EILEEMSKRR---YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLI 350
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE---- 466
+ CK A + + + GL + Y LI+ + A+ + ++M E
Sbjct: 351 NSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFT 410
Query: 467 ----------------ARIYDLKG---------------SYLTIMTGLMENHRPELMAAF 495
R+ D G SY TI++G N EL AF
Sbjct: 411 PTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ--ELEKAF 468
Query: 496 ---LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++ V + +V T ++S+I CK RL + + M+ L P++ TY SLIN
Sbjct: 469 QLKVEMVAKGISPDVAT--YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLIN 526
Query: 553 GYVTAEQYFSVLMMWHEIKRK 573
Y L + E+ +K
Sbjct: 527 AYCIEGDLDKALRLHDEMIQK 547
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 172/422 (40%), Gaps = 53/422 (12%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
N+ + T ++ N + A + + L P+ +LI S LK+A+
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFS---QQGFLKQAY 398
Query: 127 ASVVYVIEK--NPKLLDFQTV---HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWG 181
+ ++E P ++ + + H +LG M +A+ L++ M + + +
Sbjct: 399 QIMKEMVENGFTPTIITYNALINGHCILGRMEDAS------GLLQEMIERGFIPDVVSYS 452
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
+ CR E+ ++ ++ + P++ ++ ++G C + + +
Sbjct: 453 TIISGFCRNQE--------LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQ-RRLGEVC 503
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
+ + M LG+ P+E ++ L Y ++G +K + L M + GFS +V Y+ LI+G+
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV---------------KGFLQNGNV 346
K + A R +L L E+S ++ TY ++ KGF +
Sbjct: 564 NKQSRTKEAKRLLLKLL----YEESVPNEITYNTLIDNCNNLEFKSALALMKGFC----M 615
Query: 347 KGLANLIIEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
KGL N EA ++ S G ++ V II +G +KA+++ EM G +
Sbjct: 616 KGLMN---EADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPH 672
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+ K+ E + E QL+ S + LI + + + F++ +
Sbjct: 673 SVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLK 732
Query: 463 DM 464
DM
Sbjct: 733 DM 734
>gi|413919768|gb|AFW59700.1| hypothetical protein ZEAMMB73_261613 [Zea mays]
Length = 216
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
L AA DE+ E + N+ + FCKA +ED T + M P T+ +
Sbjct: 44 LFAALADEIKHYIPGEHLALELNNSVLFFCKAKMMEDVVCTCKCMREQNIRPTSHTFCHM 103
Query: 551 INGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
+ GY + + + V M+W EIKR+ G+ + +L+D+ + +KGG+F VM+++
Sbjct: 104 LCGYSSMDMHREVTMLWGEIKRRHEY-GE--LDLFRDLLDSLVLNFLKGGYFPRVMEIIS 160
Query: 611 KSQEMKVFVDKWKYKQAFMENHKKL-----KVAKLRKRNFKKMEALIAFKNWAGLN 661
+ ++ DKWKY AF++ HK L + + K++E + AF+ WA +N
Sbjct: 161 YMSKHNIYCDKWKYGCAFLKLHKNLYMNLNSLHDKTEAQSKRIEDVRAFRLWASIN 216
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 148/346 (42%), Gaps = 14/346 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+K ++ CN + C L + A +++ M+ + ++G L + G ++
Sbjct: 192 LKADVNVCNTLIHCTCR-LGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEV 250
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L G + V Y+ +I G+++ G L A++ +S +KE+ +
Sbjct: 251 ASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLF----------ESTMTKESVPD 300
Query: 336 VVKG--FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
V + K L + Q+ E G+V+D ++ A G + KA +
Sbjct: 301 VFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYN 360
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M GC VY + K+ + EA +L+ D++ G+ D Y+ +I+ +
Sbjct: 361 MQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGR 420
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
++ A+S F M+ + +Y T++ GL + R + DE+ + + T +
Sbjct: 421 YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLT-TFG 479
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
++I KAGR+EDA R++ + PN Y +LI+G+ + Q
Sbjct: 480 TLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQ 525
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 119/302 (39%), Gaps = 8/302 (2%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
GV + ++ +L + G K +E+ M + G V Y+ LIS K G ++ A
Sbjct: 330 GVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEA 389
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
L L N + TY V+ G + + ++ + S VV +
Sbjct: 390 ----LELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNT 445
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
+++ L +D+A + DEM A C L + + K R +A + +
Sbjct: 446 ---LLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLV 502
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
G + Y+ALI S + LF+DM E + +Y ++ G
Sbjct: 503 KMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTS 562
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+ L E+V + +N +I + AG++EDA + MI F P+ QTY +L
Sbjct: 563 MAMELLQEMVREGHTPALA-TYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
Query: 551 IN 552
N
Sbjct: 622 PN 623
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 102/235 (43%), Gaps = 8/235 (3%)
Query: 231 CYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
C G Q V +A +++E M+ G+ P+ ++ + + + G EK +M S
Sbjct: 379 CLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSP 438
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
+V Y++L++G KL + A L N D + T+ ++ + G ++
Sbjct: 439 DVVTYNTLLNGLKKLRRTDEACD--LFDEMQANKCMPDLT--TFGTLIDTLAKAGRME-- 492
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
+ + ++ +L G + + +IS G DK + + +M C C Y
Sbjct: 493 -DALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTIL 551
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
+ + + T+ A +L+ ++ G + Y+ LI + + + A++LF++M
Sbjct: 552 VLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEM 606
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 129/327 (39%), Gaps = 19/327 (5%)
Query: 253 RPNESSF-GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
+P+ +F + +L ++ +++ + + + + +V Y++LI+GY K G+ + A
Sbjct: 86 QPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRAL 145
Query: 312 RTILLCLGGGNMEQSDFSKET----YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
G+ + + S +T C++ + + + Q++ +G+ D
Sbjct: 146 DMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRA----------TDALAVFQEMLGAGLKAD 195
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+V +I LG+ +A +L M A C+ Y + A+C+ + E +
Sbjct: 196 VNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFME 255
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD-MREARIYDLKGSYLTIMTGLMEN 486
G L NY+ +I+ I A LF M + + D+ L I L ++
Sbjct: 256 LARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI--ALCKS 313
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ E E E V + ++ ++ AF KAGR A M P+
Sbjct: 314 KQLEEALTLFQE-AEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVV 372
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRK 573
Y LI+ + L + ++ RK
Sbjct: 373 YNVLISCLGKQGKVDEALELLEDMNRK 399
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 185/440 (42%), Gaps = 48/440 (10%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T + LL + N + A AL + M K G+ D+ N+ F KV E
Sbjct: 12 TYNALLSGLCNGGRMSDAQALYERMIK----------AGYSPDVVTYNTLLHGFCKVGE- 60
Query: 204 CCRIALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
LDE L P++ NA + G C + +A+++++ M + P+
Sbjct: 61 -----LDEALKIFDGAVKRGFVPDVVTYNALINGFCKA-DKLDEAQRILQRMVSENLVPD 114
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
++ L G ++ E L+ + GFS ++ YS+LISG + L S +
Sbjct: 115 VVTYNSLVNGLCKNG---RVDEARMLIVDKGFSPNVITYSTLISGLCR--ELRGVSEALK 169
Query: 316 LCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVG 371
L G++ + + E TY ++ G L+ V L + LEP I
Sbjct: 170 LF---GSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV--- 223
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
I G + A +L +M+ GC + + + CKE R EA L+ + +
Sbjct: 224 --FIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 281
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM---ENHR 488
G + +++ LI + ++ A + F++M + + +Y ++ GL + R
Sbjct: 282 KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGR 341
Query: 489 PELMAAFLDEVVEDPRV-EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+ D ++E RV +V T ++++I KAG+L+DA+R L M PN TY
Sbjct: 342 IKEAITLFDAMIEKGRVPDVVT--YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTY 399
Query: 548 LSLINGYVTAEQYFSVLMMW 567
SLI+G E+ L ++
Sbjct: 400 NSLISGLCGLEKVDEALELF 419
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 156/362 (43%), Gaps = 27/362 (7%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G PN ++ L G L M + G+S +V Y++L+ G+ K+G L+ A
Sbjct: 5 GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64
Query: 311 SRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR 368
+ G +++ F + TY ++ GF + + ++ Q++ +V D
Sbjct: 65 LKIF-----DGAVKRG-FVPDVVTYNALINGFCKADKLDEAQRIL---QRMVSENLVPDV 115
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR-TAEATQLVM 427
+++ G D+A ++ + G S + Y + C+E R +EA +L
Sbjct: 116 VTYNSLVNGLCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRGVSEALKLFG 172
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ G + +V Y+ LI+ + AF LF + + + +Y + GL +
Sbjct: 173 SVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG 232
Query: 488 RPE---LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
R E LM +DE P +V +H N++I+ CK R+++A+ L M PN
Sbjct: 233 RVEDALLMLKDMDEKGCVP--DVVSH--NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNA 288
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN-LVDAFLYALVKGGFFD 603
++ +LI G A ++ + + E+ ++ G K +N LVD A +G +
Sbjct: 289 ISFNTLICGQCRAGKWKKAMTTFKEMLKR----GVKPTVVTYNILVDGLCKARQEGRIKE 344
Query: 604 AV 605
A+
Sbjct: 345 AI 346
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFC 520
MR+ + + +Y +++GL R A + +++ P V +N+++H FC
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVT----YNTLLHGFC 56
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
K G L++A + + F P+ TY +LING+ A++
Sbjct: 57 KVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADK 95
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 182/451 (40%), Gaps = 58/451 (12%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
++H LL ++ +APAFAL MF+ R + + L +C A L++ +
Sbjct: 85 SLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARA-LELLRQ 139
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
R PN N + G C + + + + E G+ PN+ ++G +
Sbjct: 140 MPR-----------PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVI 188
Query: 264 YLYALKG-LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ G + E + + ++ + + V Y++LI GY G L++A LL
Sbjct: 189 SGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA----LLYRDRMV 244
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ TY +V +G L+ +++ G+ D +I+ G
Sbjct: 245 ERGVAMTVATYNLLVHALFMDGRGTEAYELV---EEMGGKGLAPDVFTYNILINGHCKEG 301
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
KA I + M+ G + Y + A K+ + E +L + G++ D+ Y+
Sbjct: 302 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 361
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE- 501
ALI + TS + AF + +M + RI +Y T+M GL R + +DE+ E
Sbjct: 362 ALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER 421
Query: 502 --------------------DPRVEVKTHD-------------WNSIIHAFCKAGRLEDA 528
D + ++ + +N++I CK G+ +DA
Sbjct: 422 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 481
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ ++ M+ P+D TY+SLI G T ++
Sbjct: 482 ENMVKEMVENGITPDDSTYISLIEGLTTEDE 512
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 49/341 (14%)
Query: 212 NLDFM-----KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
+L+FM KP+++ L C + + A KV+E M G+ P+ SS+ FL
Sbjct: 84 HLEFMVEKGQKPDVFQATQLLYDLCKACK-MRKAIKVMEMMIGSGIIPDASSYTFLVSSL 142
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
KG ++L M E+G+ + V Y+SL+ G LC+ GN+ QS
Sbjct: 143 CRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRG---------------LCM-HGNLTQS 186
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
+++ +Q G L P+ + F + +A G +D+
Sbjct: 187 -------LQLLDRLIQKG--------------LVPNAY----TYSFLLEAAYKERG-ADE 220
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A +LDE+ A G L Y L CKE RT +A +L ++ S G +V +Y+ L+
Sbjct: 221 ASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLR 280
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ ++ A L +M +Y ++ L + R E L+E++ R +
Sbjct: 281 SLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIR-ARFK 339
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+N II CK G+L+ + L +M++ PN+ TY
Sbjct: 340 PTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTY 380
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 135/345 (39%), Gaps = 25/345 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN Y + LE Y + +A K+++ + G PN S+ L +G E +
Sbjct: 200 PNAYTYSFLLEAA-YKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIR 258
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L + GFS +V Y+ L+ G E A+ + L N ++ S TY ++
Sbjct: 259 LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEAN----VLLAEMNGDERSPSTVTYNILI 314
Query: 338 KGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+G + ++ E + +P+ S II+ G D LD+M
Sbjct: 315 GSLALHGRTEHALEVLEEMIRARFKPTA-----SSYNPIIAHLCKDGKLDLVVKCLDQMM 369
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
C+ G Y + C+E EA ++ + + Y +I + +
Sbjct: 370 YRHCNPNEGTY-NAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTY 428
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-----DPRVEVKTH 510
AF L +M + +Y +++ GL M L+E +E + + T
Sbjct: 429 PAFQLLYEMTKYGFTPDSFTYSSLIRGL-------CMEGMLNEAIEIFSVMEENNKPDTE 481
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++NS+I CK+ R + A M+ + PN+ TY L+ G +
Sbjct: 482 NYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGII 526
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 164/387 (42%), Gaps = 22/387 (5%)
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
E +I+ + V+ + +A LK Q + L + GF+ YS+L+S
Sbjct: 632 ELLIDCLHAFDVKDSAMHVAIIASYGKLKLWQNAEIVFRDL-QQHGFAGNTSAYSALLSA 690
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE--VVKGFLQNGNVKGLANLIIEAQK 358
Y + GN E A+R + NM + C V++ F + G K ++ Q+
Sbjct: 691 YAETGNFERATRAL------DNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFF---QR 741
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
L GI + I A G ++A S+ +M G S + V+ L Y +E
Sbjct: 742 LPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETV 801
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
+A +LV DI +GL+LD+ Y+ +I +++A +F+ M+E ++ T
Sbjct: 802 EIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNT 861
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ N + A L E+++ + ++I A+ + EDA+ + +
Sbjct: 862 LIMLYSRNQMVQEAQALLREMIKTGNAP-NISTYTTLISAYGRLQAYEDAELVFKSIAET 920
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG-QKGIKFEHNLVDAFLYALV 597
+P+ Y +IN Y A ++ + EI ++ DG + + H L+D++
Sbjct: 921 GCKPDATAYNVMINVYRKAGEHRKI----EEIIEQMKVDGFEPSLTTIHMLMDSY----G 972
Query: 598 KGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KGG +V+E E+ + D Y
Sbjct: 973 KGGATGKAEEVLETLPEIGMSPDAIHY 999
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 140/336 (41%), Gaps = 28/336 (8%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A + ++ M G++PN + ++ + G ++I E + E G S + +
Sbjct: 700 ATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFH 759
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
+ + GNLE A R++ M+++ FS +V K L + + I+A++L
Sbjct: 760 AFSRNGNLEEA-RSMYR-----QMKEAGFSPSI--QVFKALLA---LYSRETVEIDAEEL 808
Query: 360 ----EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
+ +G+ +D + +IS LG A + M GCS + + Y +
Sbjct: 809 VKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSR 868
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
EA L+ ++ +G ++ Y LI A Q ++ A +F+ + E +
Sbjct: 869 NQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATA 928
Query: 476 YLTIMTGLMEN---HRPELMAAFLDEVVEDPRV---EVKTHDWNSIIHAFCKAGRLEDAK 529
Y +M + HR ++E++E +V E + ++ ++ K G A+
Sbjct: 929 Y-NVMINVYRKAGEHRK------IEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAE 981
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
L + + P+ Y S+IN ++ + Y S ++
Sbjct: 982 EVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVI 1017
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 2/182 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH-RTAEATQLVMDISSS 432
++S G + +L M GC L + +KA + + A+ L+ D+ ++
Sbjct: 131 LMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAA 190
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GL+ D Y+ LI A + A +F +M+ +Y +++ R E
Sbjct: 191 GLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAA 250
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++ ++++ +NS++HAF + GR+E+ +R M + ++ TY ++I+
Sbjct: 251 SSIF-RIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIH 309
Query: 553 GY 554
Y
Sbjct: 310 MY 311
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 70/398 (17%), Positives = 159/398 (39%), Gaps = 62/398 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSV-SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
++P + A +A + C Y + +DAE M GVRP+ ++ + ++ G+ EK
Sbjct: 367 VRPTLQAFSAMI--CAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEK 424
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVK---LGNLESASRTILLCL------------G 319
+ L M G ++ Y+ ++ + + + +E+ S+ ++ G
Sbjct: 425 CIILYKAMVGSGLKPELSVYAIMVRVFYQKSSVAEIENLSKEMVQSSASLAALSSTLAKG 484
Query: 320 GGNMEQSDFSK-----------ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS------ 362
G E + K ET +V+ F +G + +L+ +EPS
Sbjct: 485 GFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVHAVSSIEPSVAAHLY 544
Query: 363 ---GIVVDRSVGFG-----------------------IISACVNLGLSDKAHSILDEMNA 396
+++ ++ F ++++ G+ D+A + +M
Sbjct: 545 KRLAVMLAKAGRFSEAEEEMRTSQTYGQVQVSDFLKVLVASYDRAGMQDEALARFLDMTT 604
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + V + YC++ A +L++D + D + A+I + + +Q+
Sbjct: 605 EGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFDVKDSAMHVAIIASYGKLKLWQN 664
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A +FRD+++ +Y +++ E E LD +V ++ N ++
Sbjct: 665 AEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVA-AGLQPNATCANYVL 723
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
AF +AG+ ++ +R+ + PN +T++ + + +
Sbjct: 724 EAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAF 761
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 134/346 (38%), Gaps = 43/346 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+ N + C +SDA + E M G P+ ++ + +Y G E
Sbjct: 192 LRPDTITYNTLISACSLN-NRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAA 250
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ +M E GF+ V Y+S++ + + G +E R G M + S + TY
Sbjct: 251 SSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERI------RGMMRDARCSSDEITY 304
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNLGLSDKAHSILD 392
++ + + G + L ++ ++ G D SV F + I G ++A ++ +
Sbjct: 305 NTMIHMYGKAGMHRKAEELYVQ---MKEEGRCPD-SVTFTVLIDTLGKAGFVNEAAAMFE 360
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M L + + AY K +A + +G++ D+ Y +++ +
Sbjct: 361 DMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAG 420
Query: 453 DFQSAFSLFRDM------REARIYDL--KGSYLTIMTGLMENHRPELM------------ 492
+ L++ M E +Y + + Y +EN E++
Sbjct: 421 MPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSVAEIENLSKEMVQSSASLAALSST 480
Query: 493 ---------AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
AA + ++ V VK N ++ AF +G+L DA+
Sbjct: 481 LAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDAR 526
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 156/350 (44%), Gaps = 21/350 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P++ N ++ C Q V A ++E MS V P+E++F L + +G E
Sbjct: 191 IQPDVVTLNTLIKALCRAHQ-VRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAA 249
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD-FSKE--T 332
+ +++ M E G S V + LI+GY K+G +E A LG E +D F + T
Sbjct: 250 LRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDA-------LGYIQKEIADGFEPDQVT 302
Query: 333 YCEVVKGFLQNGNVK-GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
Y V QNG+V L + + Q+ + +V I+ G D+A I+
Sbjct: 303 YNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV----INCLSKNGELDEAKGIV 358
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++M GC + + A C ++R EA L +++ GL DV ++ LI A
Sbjct: 359 NQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKV 418
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED--PRVEVKT 509
D LF +M+ + + +Y ++ L + L E+ + PR V
Sbjct: 419 GDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVT- 477
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+N+II A CK R+E+A+ +M + T+ +LI+G A++
Sbjct: 478 --YNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKR 525
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 132/356 (37%), Gaps = 30/356 (8%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T +T++ + A +V M + +V +C +N
Sbjct: 334 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNR-------- 385
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAE---KVIETMSVLGVRPNES 257
EE +A + + + P++Y N + C V D ++ E M G P+E
Sbjct: 386 LEEALDLARELTVKGLSPDVYTFNILINALC----KVGDPHLGIRLFEEMKSSGCAPDEV 441
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
++ L G ++L M G V Y+++I K +E A
Sbjct: 442 TYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF--- 498
Query: 318 LGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFG 373
M+ S+ T+ ++ G + + LI + K L+PS I +
Sbjct: 499 ---DQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYN-----S 550
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
I++ G KA IL+ M A G + + Y + CK RT A +L+ + G
Sbjct: 551 ILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 610
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
++ Y+ +I++ + + A SLFR+M E +Y + GL P
Sbjct: 611 IRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGP 666
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 14/181 (7%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D + +++N G VY L + R + +++ G+Q DV + L
Sbjct: 142 DAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTL 201
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED-- 502
I+A + ++A + +M + + ++ T+M G +E E +++E
Sbjct: 202 IKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGC 261
Query: 503 --PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI-----NGYV 555
RV V N +I+ +CK GR+EDA +++ I FEP+ TY + + NG+V
Sbjct: 262 SPTRVTV-----NVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHV 316
Query: 556 T 556
+
Sbjct: 317 S 317
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 159/420 (37%), Gaps = 60/420 (14%)
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG 233
F P ++ V +N + LKV + + L E D P+++ N + C
Sbjct: 296 FEPDQVTYNTFVHCLCQNGHVSHALKVMD----LMLQEGHD---PDVFTYNTVI-NCLSK 347
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
+ +A+ ++ M G P+ ++F L + E+ ++L + G S +
Sbjct: 348 NGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYT 407
Query: 294 YSSLISGYVKLGNLESASR-----------------TIL---LCLGGGNMEQSDFSKETY 333
++ LI+ K+G+ R IL LC G + D KE
Sbjct: 408 FNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKE-- 465
Query: 334 CEVVKGFLQNGNVKGLA--NLIIEA----QKLEPSGIVVDRSVGFGIISACVNL-----G 382
NG + N II+A ++E + V D+ GI + V G
Sbjct: 466 ------MESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDG 519
Query: 383 LS-----DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
L D A ++++M G Y L YCK+ +A ++ ++++G ++D
Sbjct: 520 LCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEID 579
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM-ENHRPELMAAF- 495
V Y LI + Q A L R MR I +Y ++ L N+ + ++ F
Sbjct: 580 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFR 639
Query: 496 -LDEVVEDPRVEVKTHDWNSIIHAFCK-AGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ EV E P + + C+ G +++A L M+ F P ++ L G
Sbjct: 640 EMTEVGEPP----DALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEG 695
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 71/165 (43%), Gaps = 1/165 (0%)
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
S+ +EM G + +KA C+ H+ A ++ ++SS + D + L++
Sbjct: 180 ESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQG 239
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
I ++A + M E + + ++ G + R E ++ + + D E
Sbjct: 240 FIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADG-FEP 298
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+N+ +H C+ G + A + + M+ +P+ TY ++IN
Sbjct: 299 DQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVIN 343
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 124/314 (39%), Gaps = 21/314 (6%)
Query: 82 NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLD 141
N +EA + LT L P N LI L + D H R F ++ + D
Sbjct: 384 NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE----MKSSGCAPD 439
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
T + L+ + + A L+K M N + + +C++
Sbjct: 440 EVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMR--------I 491
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
EE + + + + N ++G C + + DA ++IE M G++P+ ++
Sbjct: 492 EEAEEVFDQMDAHGISRSAVTFNTLIDGLCKA-KRIDDATELIEQMVKEGLQPSNITYNS 550
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+ Y +G +K ++ M GF +V Y +LI+G K G + A L L G
Sbjct: 551 ILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVA----LKLLRGM 606
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL-EPSGIVVDRSVGFGIISACVN 380
++ + + Y V++ + N++ +L E ++ EP + + V G+ C
Sbjct: 607 RIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGL---CRG 663
Query: 381 LGLSDKAHSILDEM 394
G +A L EM
Sbjct: 664 GGPIKEAFDFLVEM 677
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 161/390 (41%), Gaps = 18/390 (4%)
Query: 186 DICRKNSNFVAFLKV--FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
DI N+ AF + E C + P++ CN + G C V +A ++
Sbjct: 168 DIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKD-GDVEEALEI 226
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
++ M + G P+ ++ + + + G K+VE ++ S +V +++L+ G+ K
Sbjct: 227 LDGMKLAGPVPDVITYNSIIHALCVAG---KVVEAAEILKTMSCSPDLVTFNTLLDGFCK 283
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
G L A + M + + + TY +V G + G V+ L+ E +
Sbjct: 284 AGMLPRALEVL------EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR--- 334
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
G + D ++ G ++AH ++ EM+ GC G+ +Y + YC+ +
Sbjct: 335 QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHK 394
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A +++ ++ S + + Y+ ++ I A SL D+ +Y T++
Sbjct: 395 AREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLID 454
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
GL + +R DE+ S++ C+ GR++DA + M +
Sbjct: 455 GLCKANRVREACDLADEMASRGCFPNDV-TLGSVVFGLCRVGRVDDAWSLVVEMSRKRHA 513
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
PN Y SLI+G +++ M+ ++
Sbjct: 514 PNVVVYTSLIDGLCKSDRMDDACMVLDAMR 543
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 140/340 (41%), Gaps = 10/340 (2%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ + G C Q++ A + + + V P+ F L + G ++ V+
Sbjct: 60 PNLVTFKILIRGNCKAGQAMR-ALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVK 118
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M ++V Y+++ISG K GNLE A + + G D TY ++
Sbjct: 119 LFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIV--TYNTLI 176
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
F + ++ +K++ +GI D ++S G ++A ILD M
Sbjct: 177 NAFYRASRIREACAF---REKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLA 233
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + Y + A C + EA +++ +S S D+ ++ L++ + A
Sbjct: 234 GPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCSP---DLVTFNTLLDGFCKAGMLPRA 290
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+ +M I +Y ++ GL + ++ L+E+V + + S++
Sbjct: 291 LEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIP-DVIAYTSLVD 349
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
CK+G +E+A + ++ M Y SL++GY A
Sbjct: 350 GLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRA 389
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 118/327 (36%), Gaps = 52/327 (15%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G PN +F L G + +E ++EF + + ++ LI G K GN + A
Sbjct: 57 GCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQA 116
Query: 311 SRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR 368
+ NME S E TY V+ G ++GN+
Sbjct: 117 VKLF------ENMESSRVKPEIVTYNTVISGLCKSGNL---------------------- 148
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACG--CSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+KA +L+EM G + + Y + A+ + R EA
Sbjct: 149 ----------------EKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFR 192
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ ++G+ DV + L+ D + A + M+ A +Y +I+ L
Sbjct: 193 EKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVA 252
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ A L + P + +N+++ FCKAG L A L M P+ T
Sbjct: 253 GKVVEAAEILKTMSCSPDLVT----FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVIT 308
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRK 573
Y L+NG Q + EI R+
Sbjct: 309 YTILVNGLCRVGQVQVAFYLLEEIVRQ 335
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 131/326 (40%), Gaps = 20/326 (6%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T +TLL A A +++ M + + + +CR VAF +
Sbjct: 270 DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFY-L 328
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
EE R P++ A + ++G C + + +A K+++ MSV G R +
Sbjct: 329 LEEIVRQGY-------IPDVIAYTSLVDGLCKSGE-IEEAHKLVKEMSVRGCRTGVVMYS 380
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L Y G K E+ + M + Y+ ++ G +K G++ A I +
Sbjct: 381 SLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR 440
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISAC 378
G + TY ++ G + V+ +L E ++ P+ + + SV FG+
Sbjct: 441 GYVPDV----VTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLG-SVVFGL---- 491
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
+G D A S++ EM+ + + VY + CK R +A ++ + G+ LD
Sbjct: 492 CRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDD 551
Query: 439 GNYDALIEASITSQDFQSAFSLFRDM 464
Y LI + A +++ +M
Sbjct: 552 FAYRKLIVSMSHGGRVAEAMAMYDEM 577
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 151/371 (40%), Gaps = 30/371 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P + N + C L VSDA + ++ M + P+ S+ L Y Y+ G + +
Sbjct: 310 PTVVTYNTIMYSLCR-LGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALL 368
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE-- 335
L S + +V Y++LI G + GNL+ A + D K C
Sbjct: 369 LFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGM-----------KDDMIKHGLCPDV 417
Query: 336 -----VVKGFLQNGNVKGLANLIIE--AQKLEPSGIV-VDRSVGFGIISACVNLGLSDKA 387
+V+GF Q GN+ L E ++ L+P I R VG + LG KA
Sbjct: 418 VTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGE------LKLGNPSKA 471
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ +EM A G L Y + CK +A +LV + G+ D Y ++I A
Sbjct: 472 FGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHA 531
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ S + A +F DM + I+ +Y ++ R + + DE+ +D V
Sbjct: 532 HLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEM-QDKGVSP 590
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N++I+ CK ++ A M PN TY LIN + + L ++
Sbjct: 591 NVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLY 650
Query: 568 HE-IKRKISTD 577
+ + R+I D
Sbjct: 651 KDMLDREIKPD 661
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 92/458 (20%), Positives = 175/458 (38%), Gaps = 85/458 (18%)
Query: 211 ENLDFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
E LD M+ PN + N + G G A+++IE MS+LG++ + ++ L
Sbjct: 228 EVLDVMRMFGCDPNDVSYNVLVNGLS-GKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRG 286
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
+ K + E+ +L M G +V Y++++ +LG + A R + + M
Sbjct: 287 FCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDV------MVN 340
Query: 326 SDFSKE--TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNL 381
D + +Y ++ G+ + GN L E ++ L PS + + +I
Sbjct: 341 EDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNT-----LIDGGCRT 395
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G D A + D+M G + + ++ +C+ A +L ++ S GL+ D Y
Sbjct: 396 GNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAY 455
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
I + + AF + +M+ E P+L+
Sbjct: 456 TTRIVGELKLGNPSKAFGMKEEMKA------------------EGFPPDLIT-------- 489
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT----- 556
+N +I+ CK G +DA +++M P+ TY S+I+ ++
Sbjct: 490 ----------YNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLR 539
Query: 557 -AEQYFS---------------VLMMWHEIKRKISTDGQ-------KGIKFEHNLVDAFL 593
AE+ FS VL+ + ++ ++ + KG+ +A +
Sbjct: 540 KAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALI 599
Query: 594 YALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMEN 631
Y L K D + + + V +K+ Y EN
Sbjct: 600 YGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINEN 637
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 137/325 (42%), Gaps = 27/325 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ + G C + ++ A+++ + M G++P+ ++ G K
Sbjct: 415 PDVVTFTILVRGFCQ-MGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFG 473
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSKETYCEV 336
++ M GF ++ Y+ LI+G KLGN + A+ + + L G + ++ + +
Sbjct: 474 MKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHL 533
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ G L+ + ++++ + + PS VV +V +I + G D A DEM
Sbjct: 534 ISGLLRKAE-EVFSDML--KKGIHPS--VVTYTV---LIHSYAVRGRLDFAKKYFDEMQD 585
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G S + Y + CKE+ A L ++ S G+ + Y LI + Q +Q
Sbjct: 586 KGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQD 645
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV--------- 507
A L++DM + I ++ +M L ++++ L+A E + VE+
Sbjct: 646 ALKLYKDMLDREIKPDSCTHSALMKHLSKDYK--LLAVLRLENLPLAIVEINSTWIAEGF 703
Query: 508 ------KTHDWNSIIHAFCKAGRLE 526
K + IH F K G LE
Sbjct: 704 VKLEESKNNSHFRAIHVFEKGGFLE 728
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 78/192 (40%), Gaps = 36/192 (18%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G +A +LD M GC Y + + A +L+ +S GL++ Y
Sbjct: 221 GEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTY 280
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ LI + F+ A L R+M +G+ T++T
Sbjct: 281 NPLIRGFCKKEMFEEANDLRREMLG------RGALPTVVT-------------------- 314
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
+N+I+++ C+ GR+ DA+R L M+ P+ +Y +LI GY +
Sbjct: 315 ----------YNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFA 364
Query: 562 SVLMMWHEIKRK 573
L+++ E++ K
Sbjct: 365 EALLLFSELRSK 376
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 14/308 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN+ NA ++ C G A ++ M G+ P+ +F L E+
Sbjct: 186 KPNLVVYNAVIDACSKG-GDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECD 244
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+ + M E G + V Y++LI+ Y + G + + + +E S TY +
Sbjct: 245 RIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVI---TYSTM 301
Query: 337 VKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+ G+ + G L E Q +EP GI + ++ LG D+AHSI M
Sbjct: 302 IDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNT-----MVDIHARLGNFDEAHSIRRAM 356
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + + Y L +Y K+ + EA L+ ++ G ++ Y ALI+A
Sbjct: 357 EEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFH 416
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKTHDWN 513
+ A +LF+D+++A + Y T++ G +N P+ A L+E+ ++ R V T+ N
Sbjct: 417 RDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITY--N 474
Query: 514 SIIHAFCK 521
S++ A+ +
Sbjct: 475 SLLDAYGR 482
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 96/207 (46%), Gaps = 4/207 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
IIS+ LG SD A I D G + VY + AY + + A+A + + +
Sbjct: 126 IISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVE-IFEAMKVV 184
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ ++ Y+A+I+A D+ +A +FR+M E + + ++ T+++ +R E
Sbjct: 185 CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECD 244
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ-FEPNDQTYLSLIN 552
E+ E+ + +N++I +C+ G++ + M EP+ TY ++I+
Sbjct: 245 RIFAEM-EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMID 303
Query: 553 GYVTAEQYFSVLMMWHEIKRK-ISTDG 578
GY + ++ E++ + + DG
Sbjct: 304 GYAKLGLAHEAIALFQEMRNQNVEPDG 330
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 87/203 (42%), Gaps = 12/203 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P++ + ++G L +A + + M V P+ + + ++A G ++
Sbjct: 291 IEPSVITYSTMIDGYAK-LGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEA 349
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ M E GF+ +V Y++L+ Y K G A + M+Q S TY
Sbjct: 350 HSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLL------EEMKQRGASPNILTY 403
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ + ++G + L Q ++ +G+ D + ++ C G D+A ++L+E
Sbjct: 404 SALIDAYCKHGFHRDAMALF---QDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEE 460
Query: 394 MNACGCSVGLGVYVPTLKAYCKE 416
M G + Y L AY ++
Sbjct: 461 MADNGIRPNVITYNSLLDAYGRQ 483
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 14/308 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN+ NA ++ C G A ++ M G+ P+ +F L E+
Sbjct: 187 KPNLVVYNAVIDACSKG-GDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECD 245
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+ + M E G + V Y++LI+ Y + G + + + +E S TY +
Sbjct: 246 RIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVI---TYSTM 302
Query: 337 VKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+ G+ + G L E Q +EP GI + ++ LG D+AHSI M
Sbjct: 303 IDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNT-----MVDIHARLGNFDEAHSIRRAM 357
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + + Y L +Y K+ + EA L+ ++ G ++ Y ALI+A
Sbjct: 358 EEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFH 417
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKTHDWN 513
+ A +LF+D+++A + Y T++ G +N P+ A L+E+ ++ R V T+ N
Sbjct: 418 RDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITY--N 475
Query: 514 SIIHAFCK 521
S++ A+ +
Sbjct: 476 SLLDAYGR 483
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 96/207 (46%), Gaps = 4/207 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
IIS+ LG SD A I D G + VY + AY + + A+A + + +
Sbjct: 127 IISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVE-IFEAMKVV 185
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ ++ Y+A+I+A D+ +A +FR+M E + + ++ T+++ +R E
Sbjct: 186 CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECD 245
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ-FEPNDQTYLSLIN 552
E+ E+ + +N++I +C+ G++ + M EP+ TY ++I+
Sbjct: 246 RIFAEM-EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMID 304
Query: 553 GYVTAEQYFSVLMMWHEIKRK-ISTDG 578
GY + ++ E++ + + DG
Sbjct: 305 GYAKLGLAHEAIALFQEMRNQNVEPDG 331
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 87/203 (42%), Gaps = 12/203 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P++ + ++G L +A + + M V P+ + + ++A G ++
Sbjct: 292 IEPSVITYSTMIDGYA-KLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEA 350
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ M E GF+ +V Y++L+ Y K G A + M+Q S TY
Sbjct: 351 HSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLL------EEMKQRGASPNILTY 404
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ + ++G + L Q ++ +G+ D + ++ C G D+A ++L+E
Sbjct: 405 SALIDAYCKHGFHRDAMALF---QDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEE 461
Query: 394 MNACGCSVGLGVYVPTLKAYCKE 416
M G + Y L AY ++
Sbjct: 462 MADNGIRPNVITYNSLLDAYGRQ 484
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 136/340 (40%), Gaps = 35/340 (10%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
V++ M +G+ P+ S+ + G+ L LM G V YS+L+ GY
Sbjct: 348 VLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYC 407
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETY-CEVV-KGFLQNGNVKGLANLIIEAQKLE 360
G + A+ + M ++ S TY C V+ + G + NL+ QK+
Sbjct: 408 SKGKVFEANNLL------HEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLL---QKMN 458
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG---------------------- 398
G VD II+A N G DKA I++ M G
Sbjct: 459 EKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGK 518
Query: 399 -CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
C+ L Y + CK R +A + +++ S GLQ D YD I + SA
Sbjct: 519 KCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSA 578
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
F + +DM + +Y +++ GL ++ + +DE+ E V +N +++
Sbjct: 579 FQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKG-VSPDVCTYNHMLN 637
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
C+ GR+ DA L M+ PN ++ LI + A
Sbjct: 638 CLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKA 677
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 153/428 (35%), Gaps = 93/428 (21%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ DA ++ + M G PNE +FG L Y GL K +EL M G V Y++
Sbjct: 163 LEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNT 222
Query: 297 LISGYVKLGNLESA--------------------SRTILLCLGGGNMEQSDFSKE----- 331
LIS + K G A SR LC G +E S ++
Sbjct: 223 LISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDE 282
Query: 332 ----------TYCEVVKGFLQNG----------NVKGLANLI------------IEAQKL 359
TY ++ GF + G +K AN I I KL
Sbjct: 283 ELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKL 342
Query: 360 EPSGIVVDRSVGFGI-----------ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
+ IV+ +G GI C N LSD A ++ M G Y
Sbjct: 343 LEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSD-ARMLMGLMIRNGILPDTVTYST 401
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
L YC + + EA L+ ++ S+ + + L+ + A +L + M E +
Sbjct: 402 LLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNE-K 460
Query: 469 IYDLK-----------------GSYLTIMTGLMENHRPEL------MAAFLDEVVEDPRV 505
Y + + I+ G+ + L +D+ + +
Sbjct: 461 GYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKC 520
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
+++II CKAGRL+DAK+ M+ +P+ Y + I+ + + S
Sbjct: 521 TPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQ 580
Query: 566 MWHEIKRK 573
+ +++++
Sbjct: 581 VLKDMEKR 588
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 178/427 (41%), Gaps = 47/427 (11%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV---LGV-RPNESSFGFLAYLYALK 269
D + P++ N+ + C G + +A ++ M + LG+ PN ++ + + +
Sbjct: 246 DGLVPHVETFNSRISALC-GSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKE 304
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
G+ E+ L M + Y+ + G ++ G L A + LG G +E +S
Sbjct: 305 GMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIG-IEPDIYS 363
Query: 330 KETYCEVVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
Y V+ G +NG + + L L+I +GI+ D ++ + G +
Sbjct: 364 ---YNIVMDGLCKNGMLSDARMLMGLMIR------NGILPDTVTYSTLLHGYCSKGKVFE 414
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A+++L EM + CS L + KE R +EA L+ ++ G +D + +I
Sbjct: 415 ANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIIN 474
Query: 447 ASITSQDFQSAFSLFRDM---REARIYDLKGSYLTIMTGLMENHR--PELM--------- 492
A + A + M A + +L S++ ++ + + P+L+
Sbjct: 475 ALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGL 534
Query: 493 --AAFLDEV------VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
A LD+ + ++ + +++ IH+FC+ G++ A + L+ M
Sbjct: 535 CKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTL 594
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDA 604
QTY SLI G + Q F + + E++ +KG+ + + L L +GG +
Sbjct: 595 QTYNSLILGLGSKNQIFELYGLIDEMR-------EKGVSPDVCTYNHMLNCLCEGGRIND 647
Query: 605 VMQVVEK 611
V+++
Sbjct: 648 APSVLDE 654
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 148/371 (39%), Gaps = 55/371 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN Y CN L + +S+AE +++ M+ G + + + G +K +E
Sbjct: 429 PNTYTCNVLLHSL-WKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIE 487
Query: 278 ------------LESLMNEF-----------GFSSQMVFYSSLISGYVKLGNLESASRTI 314
L +L N F + +V YS++ISG K G L+ A +
Sbjct: 488 IVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKF 547
Query: 315 LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
+ + G S Y + F + G + ++ + +E G +
Sbjct: 548 IEMMSKGLQPDS----AIYDTFIHSFCREGKISSAFQVL---KDMEKRGCNKTLQTYNSL 600
Query: 375 ISACVNLGLSDK-----AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
I LGL K + ++DEM G S + Y L C+ R +A ++ ++
Sbjct: 601 I-----LGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEM 655
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFR------DMREARIYDLKGSYLTIMTGL 483
G+ ++ ++ LI+A + DF+++ +F +EA +Y L + L + +
Sbjct: 656 LQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEA-LYTLMFNELLVGGKV 714
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
E A L E D ++ + +I CK +LE A L R+I ++ +
Sbjct: 715 AE-------AKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFD 767
Query: 544 DQTYLSLINGY 554
+++ +I+G+
Sbjct: 768 PASFMPVIDGF 778
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 188/450 (41%), Gaps = 64/450 (14%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T++ L + N N + A + + + Y + + +CR + VA +
Sbjct: 9 DLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCII 68
Query: 201 FEECCRIALDE---------NLDFMKPNIYACNAALEG-CCYGLQSVSDAEKVIETMSVL 250
+ C++ ++ M PN+ + ++ + G CC G + +++++ M
Sbjct: 69 IDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAG--KLEESKRLFNEMVDQ 126
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMN---EFGFSSQMVFYSSLISGYVKLGNL 307
GV+PN F L + +G K++E + L+ + G +V Y+SLI G+ K+G+L
Sbjct: 127 GVQPNLVQFNVLIDILCKEG---KVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDL 183
Query: 308 ESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
SA R + L + E ++ S Y ++ G+ + V+ NL E ++ V
Sbjct: 184 SSA-RKLFLSMPSKGCEHNEIS---YTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKT 239
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
S +++ + G A+ + M A G SV +YV L CK EA +L
Sbjct: 240 YST---LLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFN 296
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
++ S +LD +Y LI+ + + A+ F+ + + E
Sbjct: 297 ELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQ------------------EGL 338
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ---FEPND 544
+P ++ N +IH FC+ +++ A +M ++ P+
Sbjct: 339 QPNVVTC------------------NIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDI 380
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
TY +L+ G+ + + V+ + H++ +++
Sbjct: 381 ITYNTLLRGFCESNKLEEVVNLLHKMFKRM 410
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 175/419 (41%), Gaps = 40/419 (9%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKI 275
P++ ACNA L + + DA KV + M G + S + +KG+ + K+
Sbjct: 168 PDVIACNALL-SLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIM-----VKGMCSEGKV 221
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
E L+ + G +VFY+++I GY KLG++E+A G M + ET
Sbjct: 222 EEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMP----TLET 277
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS-DKAHSIL 391
+ ++ GF + G+ L+ E ++ G+ V II A G D A SI
Sbjct: 278 FGTMINGFCKKGDFVASDRLLEEVKE---RGLRVCVWFLNNIIDAKYRHGFKVDPAESI- 333
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+ A C + Y + CKE + A L+ + S GL L +Y LI+A S
Sbjct: 334 RWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKS 393
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE------DPRV 505
+++ A L + E +Y ++ GL +++ +D+ V D V
Sbjct: 394 KEYDIASKLLLQLAERGCKPDIVTYGILIHGL-------VVSGHMDDAVNMKVKLIDRGV 446
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
+N ++ CK GR AK M+ P+ Y +LI+G++ + +
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDF----- 501
Query: 566 MWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
E ++ + +KG+K + +A + + G D + + + E + DK+ Y
Sbjct: 502 --DEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTY 558
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 117/292 (40%), Gaps = 17/292 (5%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A K++ ++ G +P+ ++G L + + G + V ++ + + G S Y+ L+S
Sbjct: 399 ASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
G K G A L + + Y ++ GF+++G+ EA+K+
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRSILPDA----YVYATLIDGFIRSGDFD-------EARKV 507
Query: 360 ----EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
G+ VD +I G+ D+A + ++ MN Y + Y K
Sbjct: 508 FTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
+ A A ++ D+ + + +V Y +LI DF A F++M+ + +
Sbjct: 568 QQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVT 627
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK--AGRL 525
Y T++ + A + E++ + +N ++ F K +GR
Sbjct: 628 YTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRF 679
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 145/342 (42%), Gaps = 12/342 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ + + C V +A ++ M LGV PN ++ L Y G E
Sbjct: 224 PDVFMVSIMVNAFCKD-GKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKG 282
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCE 335
+ M+E G S +V Y+ LI GY K ++ A + + G E++ + Y
Sbjct: 283 VLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLR-----GMQEEAALVPDERAYGV 337
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ + G + L+ E +L G+ + + +I+ G +A ++ M
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRL---GLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
Y L YC+E T+EA L + G++ V Y+ L++ F
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A ++ M + + + Y T++ GL + E + +++ + + +N++
Sbjct: 455 DALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI-TFNTM 513
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
I CK G++ +A+ +M L P+ TY +LI+GY A
Sbjct: 514 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKA 555
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 97/466 (20%), Positives = 174/466 (37%), Gaps = 81/466 (17%)
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG 233
+P E G L+D + +++ +E R+ L K N++ CN+ + G C
Sbjct: 328 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL-------KTNLFICNSLINGYC-K 379
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
+ +AE VI M ++P+ S+ L Y +G + L M + G ++
Sbjct: 380 RGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLT 439
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y++L+ G ++G + A + L + G + Y ++ G + N +G + L
Sbjct: 440 YNTLLKGLCRVGAFDDALQIWHLMMKXGVAPD----EVGYSTLLDGLFKMENFEGASTL- 494
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ + G R +IS +G +A I D+M GCS Y + Y
Sbjct: 495 --WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 552
Query: 414 C-----------------------------------KEHRTAEATQLVMDISSSGLQLDV 438
C K R E T L+ ++ GL ++
Sbjct: 553 CKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNI 612
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL--------------- 483
Y ALI+ AFS + +M E + T+++GL
Sbjct: 613 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 672
Query: 484 MENH----------RPELMAAFLDEVVEDPRVEVKTH------DWNSIIHAFCKAGRLED 527
M +H + ++ A + ++ + KT +N I CK G+++D
Sbjct: 673 MVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
A+R + F P++ TY +LI+GY A + E+ R+
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 778
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 140/340 (41%), Gaps = 51/340 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+I N+ + G + + + + ++ M + G+ PN ++G L + +G+ +K
Sbjct: 573 ISPSIEMYNSLISGL-FKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
M E G S+ ++ S+++SG +LG ++ A+ + M F + C
Sbjct: 632 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM------QKMVDHGFFPDHEC- 684
Query: 336 VVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+K ++ ++ +A+ + E+ K L P+ IV + + I+ G D A
Sbjct: 685 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIA-----IAGLCKTGKVDDARRFFSM 739
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
++ G Y + Y EA +L ++ GL ++ Y+ALI S++
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A LF + + KG + ++T +N
Sbjct: 800 VDRAQRLFHKLHQ------KGLFPNVVT------------------------------YN 823
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
++I +CK G ++ A + +MI P+ TY +LING
Sbjct: 824 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALING 863
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
Q++ GIV D + +++A G D+A + +M G + Y + Y
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 274
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE-ARIYDLKGS 475
A ++ +S G+ +V Y LI+ A + R M+E A + + +
Sbjct: 275 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 334
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW--NSIIHAFCKAGRLEDAKRTLR 533
Y ++ G + + LDE++ R+ +KT+ + NS+I+ +CK G + +A+ +
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEML---RLGLKTNLFICNSLINGYCKRGEIHEAEGVIT 391
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
RM+ +P+ +Y +L++GY + ++ Q+GI+ + L
Sbjct: 392 RMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML-------QEGIEPTVLTYNTLL 444
Query: 594 YALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
L + G FD +Q+ + V D+ Y
Sbjct: 445 KGLCRVGAFDDALQIWHLMMKXGVAPDEVGY 475
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 80/173 (46%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G + AH + +M G + + + A+CK+ + EA V + + G++ ++ Y
Sbjct: 205 GETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTY 264
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+LI ++ D ++A + + M E + +Y ++ G + + + L + E
Sbjct: 265 HSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQE 324
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ + + +I +C+ G+++DA R L M+ L + N SLINGY
Sbjct: 325 EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 377
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 162/406 (39%), Gaps = 73/406 (17%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF---------------- 259
++P + N L+G C + + DA ++ M GV P+E +
Sbjct: 433 IEPTVLTYNTLLKGLCR-VGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGA 491
Query: 260 ----------GF----LAYLYALKGLQE--KIVELESL---MNEFGFSSQMVFYSSLISG 300
GF + + + GL + K+VE E + M + G S + Y +LI G
Sbjct: 492 STLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSK--ETYCEVVKGFLQNGNVKGLANLIIEA-- 356
Y K N+ A + G ME+ S E Y ++ G ++ + +L+ E
Sbjct: 552 YCKASNVGQAFKV------KGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGI 605
Query: 357 QKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
+ L P+ V +G +I G+ DKA S EM G S + + + +
Sbjct: 606 RGLTPN------IVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYR 659
Query: 416 EHRTAEATQLVMDISSSG--------LQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
R EA L+ + G L+ D+ Y A+ + + + + F L ++
Sbjct: 660 LGRIDEANLLMQKMVDHGFFPDHECFLKSDI-RYAAIQKIADSLDESCKTFLLPNNI--- 715
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+Y++ + L TG +++ R L V D + ++IH + AG +++
Sbjct: 716 -VYNIAIAGLC-KTGKVDDARRFFSMLSLKGFVPD------NFTYCTLIHGYSAAGNVDE 767
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
A R M+ PN TY +LING +E ++H++ +K
Sbjct: 768 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 813
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 106/268 (39%), Gaps = 13/268 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ NI C+ + G Y L + +A +++ M G P+ F YA +Q+
Sbjct: 643 LSANIIICSTMVSGL-YRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYA--AIQKIA 699
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI-LLCLGGGNMEQSDFSKETYC 334
L+ F + +V Y+ I+G K G ++ A R +L L G +F TYC
Sbjct: 700 DSLDESCKTFLLPNNIV-YNIAIAGLCKTGKVDDARRFFSMLSLKG--FVPDNF---TYC 753
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G+ GNV L E + G+V + +I+ D+A + ++
Sbjct: 754 TLIHGYSAAGNVDEAFRLRDEMLR---RGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ G + Y + YCK A +L + G+ V Y ALI D
Sbjct: 811 HQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDI 870
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTG 482
+ + L M +A + Y T++ G
Sbjct: 871 ERSMKLLNQMIKAGVDSKLIEYCTLVQG 898
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 89/249 (35%), Gaps = 44/249 (17%)
Query: 208 ALDENLD-FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
+LDE+ F+ PN N A+ G C V DA + +S+ G P+ ++ L + Y
Sbjct: 701 SLDESCKTFLLPNNIVYNIAIAGLC-KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 759
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
+ G ++ L M G +V Y++LI+G K N++ A R
Sbjct: 760 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLF------------ 807
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
KL G+ + +I +G D
Sbjct: 808 ------------------------------HKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 837
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + D+M G S + Y + CK + +L+ + +G+ + Y L++
Sbjct: 838 AFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQ 897
Query: 447 ASITSQDFQ 455
+ ++
Sbjct: 898 GGFKTSNYN 906
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 107/503 (21%), Positives = 193/503 (38%), Gaps = 44/503 (8%)
Query: 81 TNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSS---LQDNHNL---KRAFASVVYVIE 134
N DEA + F+ L N P N++I S + + L ++A S+
Sbjct: 68 ANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSI----- 122
Query: 135 KNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNF 194
P ++ + + T LG R A F +K R +P L+D+ +
Sbjct: 123 --PSVIAYNCILTCLGKKRRVEEALRIFEEMK-----RDAVPNVPTYNILIDMLCREGKL 175
Query: 195 VAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
A L++ ++ R L PN+ N ++ C Q + +A + E M P
Sbjct: 176 NAALEIRDDMERAGL-------FPNVLTVNIMIDRLCKA-QKLEEACSIFEGMDDKVCTP 227
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
N +F L G + L M + G + Y+SLI + K G E +
Sbjct: 228 NAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIY 287
Query: 315 LLCLGGGNMEQSDFSKE-----TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRS 369
M + S + TY + V F KG A +++ G + D
Sbjct: 288 ------KEMVHTGCSPDLTLINTYMDCV--FKAGETEKGRALF----REINAHGFIPDAR 335
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
+I V GL+++ + + M GC + Y + +CK + +A QL+ ++
Sbjct: 336 SYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEM 395
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
G V Y ++I+ A+ LF + + I Y +++ G + R
Sbjct: 396 KVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRI 455
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+ ++E+++ + + WN ++ A KA + +A + M L+ PN TY
Sbjct: 456 DEAYLIMEELMQKG-LTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 514
Query: 550 LINGYVTAEQYFSVLMMWHEIKR 572
LING ++ + W E+++
Sbjct: 515 LINGLCRVRKFNKAFVFWQEMQK 537
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 117/273 (42%), Gaps = 26/273 (9%)
Query: 353 IIEAQKLEPS---------GIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVG 402
+ +AQKLE + + +V F +I G D A+S+ ++M CG G
Sbjct: 204 LCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPG 263
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
VY ++++ K R + ++ ++ +G D+ + ++ + + + +LFR
Sbjct: 264 AIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFR 323
Query: 463 DMREARIYDLKGSYLTIMTGLME----NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
++ SY ++ GL++ N EL A +++ + TH +N++I
Sbjct: 324 EINAHGFIPDARSYSILIHGLVKAGLANETYELFYA-----MKEQGCVLDTHAYNAVIDG 378
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
FCK+G++ A + L M P TY S+I+G ++ M++ E K
Sbjct: 379 FCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK------- 431
Query: 579 QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
GIK + + + K G D ++E+
Sbjct: 432 SNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 464
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 165/399 (41%), Gaps = 51/399 (12%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ + N + C + + +A + E M+ GV+P ++ L Y + G ++ V+
Sbjct: 384 PDAFTYNILIHWLCQ-RRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVK 442
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS--KETYCE 335
L + M GF+ +V Y++L+ G++ + A + M+Q+ S TY
Sbjct: 443 LYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALL------AEMKQNGVSCNDYTYNT 496
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G G V + ++ ++ E G V II+ + G+ A ++ +M
Sbjct: 497 LINGLCVVGRVCEVGEML---KRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI-----EASIT 450
A G + Y + YCK A +++ D+ GL+ D+ Y++LI E +++
Sbjct: 554 AKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMS 613
Query: 451 S--------------------QDFQSAFSLFRDMREA-RIY--------DLK-GSYLTIM 480
F + + + M EA R Y DL +Y T++
Sbjct: 614 HALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLI 673
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTH-DWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
G ++ E+V + + H + ++ H C+ G ++DA++ L M L
Sbjct: 674 DGFSKDGNVTFALKLYSEMVA--KGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLD 731
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTD 577
PN Y LINGY+ + + E ++RKI D
Sbjct: 732 IRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPD 770
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 185/464 (39%), Gaps = 45/464 (9%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+ C+ A+ C L+ + A V+ M G P + +F + + G E+
Sbjct: 208 IEPDQRVCSVAIASLC-KLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEA 266
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-----------------SRTILL-- 316
+ ++ + G +V ++L+ GY + A + T+L+
Sbjct: 267 LHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRG 326
Query: 317 CLGGGNMEQS--------DF----SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
C G E++ D S + V+KG L + K +L E + SGI
Sbjct: 327 CTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKE---MADSGI 383
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ I C + + A ++ ++MN G + Y L YC EA +
Sbjct: 384 PDAFTYNILIHWLCQRRKIRE-ALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVK 442
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L ++ G +V Y L++ I F A++L +M++ + +Y T++ GL
Sbjct: 443 LYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLC 502
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
R + L + V +NSII+ F KAG + A ++M PN
Sbjct: 503 VVGRVCEVGEMLKRFETEGFVPT-AMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNI 561
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDA 604
TY S I+GY L M ++++ KG++ + ++ +Y + G
Sbjct: 562 VTYTSFIDGYCKTSCCDLALKMLNDVR-------CKGLRPDIAAYNSLIYGFCQEGNMSH 614
Query: 605 VMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKM 648
+QV+ + + + Y +F+ +K LK+ + R ++KM
Sbjct: 615 ALQVLVLMLKDGLLPNISVY-NSFITGYKNLKMMEEALRFYEKM 657
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 151/365 (41%), Gaps = 28/365 (7%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFA---SVVYVIEKNPKLLD 141
DEA K + + P K T +++ + ++L H K AF +++ +++N +
Sbjct: 438 DEAVKLYTEM------PGKGFTPNVVTY-TTLMKGHINKAAFDKAYALLAEMKQNGVSCN 490
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
T +TL+ + ++K F+ F+P + +++ K + V+
Sbjct: 491 DYTYNTLINGLCVVGRVCEVGEMLK-RFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVY 549
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD-AEKVIETMSVLGVRPNESSFG 260
++ C + PNI + ++G C S D A K++ + G+RP+ +++
Sbjct: 550 QQMCAKGI-------PPNIVTYTSFIDGYCK--TSCCDLALKMLNDVRCKGLRPDIAAYN 600
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L Y + +G +++ LM + G + Y+S I+GY L +E A R +
Sbjct: 601 SLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIK- 659
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
E D TY ++ GF ++GNV L E + G + D +
Sbjct: 660 ---EGIDLDTATYTTLIDGFSKDGNVTFALKLYSE---MVAKGNIPDHITFTALTHGLCR 713
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G D A +LDEMN + +Y + Y + + EA +L ++ + D
Sbjct: 714 NGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTT 773
Query: 441 YDALI 445
YD L+
Sbjct: 774 YDILV 778
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 146/338 (43%), Gaps = 13/338 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++ C + + +A ++++MS G++PN S+ + +G ++ E
Sbjct: 43 PNVVTYNTLIDAYCK-MGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWE 101
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M GF+ V Y++L++GY K GN A + M ++ S TY
Sbjct: 102 ILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQA------LVIHAEMVRNGVSPSVVTYTA 155
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ + N+ ++ G+ + +I GL ++A+ IL+EM
Sbjct: 156 LINSMCKARNLNRAMEFF---DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 212
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G S + Y + +C R EA +V ++ GL DV +Y +I +
Sbjct: 213 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 272
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
AF + ++M E + +Y +++ GL E R A L + + D + + ++
Sbjct: 273 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL-TEACDLSQEMLDMGLPPDEFTYTTL 331
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
I+A+C G L A MI F P+ TY LING
Sbjct: 332 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLING 369
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 154/365 (42%), Gaps = 23/365 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIET---MSVLGVRPNESSFGFLAYLYALKGLQ 272
+ PN+Y N + G C SV + +K + M G PN ++ L Y G
Sbjct: 6 VSPNVYTYNILIRGFC----SVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRI 61
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
++ L M+ G ++ Y+ +I+G + G+++ A + M F+ +
Sbjct: 62 DEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILE------EMGYKGFTPDE 115
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY ++ G+ + GN L+I A+ + +G+ +I++ ++A
Sbjct: 116 VTYNTLLNGYCKEGNFH--QALVIHAEMVR-NGVSPSVVTYTALINSMCKARNLNRAMEF 172
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
D+M G Y + + ++ EA +++ +++ SG V Y+A I
Sbjct: 173 FDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCV 232
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL--DEVVEDPRVEVK 508
+ + A + ++M E + SY TI++G + EL AF E+VE V
Sbjct: 233 LERMEEALGVVQEMVEKGLAPDVVSYSTIISGFC--RKGELDRAFQMKQEMVEKG-VSPD 289
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
++S+I C+ RL +A + M+ + P++ TY +LIN Y L +
Sbjct: 290 AVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD 349
Query: 569 EIKRK 573
E+ K
Sbjct: 350 EMIHK 354
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/499 (21%), Positives = 183/499 (36%), Gaps = 79/499 (15%)
Query: 91 FKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKN--PKLLDFQTVHTL 148
F + N P+ N+LI + + AF + + K P L+ + +
Sbjct: 33 FGEMERNGCLPNVVTYNTLIDAYCKMG---RIDEAFGLLKSMSSKGMQPNLISYNVIING 89
Query: 149 L---GSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECC 205
L GSM+ A + +++ M + F P E+ L++ K NF L + E
Sbjct: 90 LCREGSMKEA------WEILEEM-GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMV 142
Query: 206 RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
R + + P++ A + C ++++ A + + M + G+RPNE ++ L
Sbjct: 143 R-------NGVSPSVVTYTALINSMCKA-RNLNRAMEFFDQMRIRGLRPNERTYTTLIDG 194
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
++ +GL + + + M E GFS +V Y++ I G+ L +E A
Sbjct: 195 FSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA--------------- 239
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
G +Q KGLA ++ IIS G D
Sbjct: 240 ------------LGVVQEMVEKGLAPDVVSYST---------------IISGFCRKGELD 272
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A + EM G S Y ++ C+ R EA L ++ GL D Y LI
Sbjct: 273 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 332
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL--------- 496
A D A L +M +Y ++ GL + R L
Sbjct: 333 NAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV 392
Query: 497 -DEVVEDPRVE----VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+V D +E ++ ++I FC G + +A R M+ +P + Y +I
Sbjct: 393 PSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVII 452
Query: 552 NGYVTAEQYFSVLMMWHEI 570
+G+ ++ E+
Sbjct: 453 HGHCRGGNLPKAFNLYKEM 471
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 119/295 (40%), Gaps = 15/295 (5%)
Query: 332 TYCEVVKGFLQNGNV-KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY +++GF G + KGL ++E +G + + +I A +G D+A +
Sbjct: 12 TYNILIRGFCSVGELQKGLGCF----GEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L M++ G L Y + C+E EA +++ ++ G D Y+ L+
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKT 509
+F A + +M + +Y ++ + + F D++ + R +T
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+ ++I F + G L +A R L M F P+ TY + I+G+ E+ L + E
Sbjct: 188 --YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ +KG+ + + + G D Q+ ++ E V D Y
Sbjct: 246 MV-------EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 293
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 165/370 (44%), Gaps = 29/370 (7%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ + + + G C + S A +++ M G +PN ++ + L +
Sbjct: 194 QPDVISYSTVINGLCKS-GNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+L S M + G +V YS+++ G+ LG+L A+ +G M + T+ +
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNT----VTFTIL 308
Query: 337 VKGFLQNGNVKGLANLIIEA---QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
V G + G V A + EA + EP+ + + C+N + D+A +LD
Sbjct: 309 VDGLCKEGMVSE-ARCVFEAMTKKGAEPNAYTYNALMD----GYCLNNQM-DEAQKVLDI 362
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M GC+ + Y + YCK R EA L++++S L D Y L++
Sbjct: 363 MVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGR 422
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN-HRPELMAAFLDEVVEDPRVEVKTHDW 512
Q A +LF++M + + +Y T++ GL ++ H E A L + +++ ++E +
Sbjct: 423 PQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDE--ALKLLKSMQESKIEPDIVLY 480
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY----VTAEQYFSVLMMWH 568
N +I AG+LE AK ++ +P +TY +I G ++ E Y
Sbjct: 481 NILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAY-------- 532
Query: 569 EIKRKISTDG 578
E+ RK+ DG
Sbjct: 533 ELFRKMEDDG 542
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 179/457 (39%), Gaps = 48/457 (10%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+Y+ N + C L V A V+ M LG++P+ +F L ++G ++ V L
Sbjct: 126 NVYSLNILINCLCR-LNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGL 184
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR------------------TIL--LCL 318
+ M G ++ YS++I+G K GN A + TI+ LC
Sbjct: 185 FNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCK 244
Query: 319 GGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
+ D E TY ++ GF G++ L E V+
Sbjct: 245 DTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN----VMP 300
Query: 368 RSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+V F I + G+ +A + + M G Y + YC ++ EA +++
Sbjct: 301 NTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVL 360
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ G V +Y+ LI + A SL +M E + +Y T+M GL +
Sbjct: 361 DIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQV 420
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
RP+ E+ + +++++ CK G L++A + L+ M + EP+
Sbjct: 421 GRPQEALNLFKEMCSSGLLP-DLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVL 479
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVM 606
Y LI G A + L + E+ K+ DG + + ++ + L+K G D
Sbjct: 480 YNILIEGMFIAGK----LEVAKELFSKLFADGIQPTIRTYTIM---IKGLLKEGLSDEAY 532
Query: 607 QVVEKSQEMKVFVDKWKYK---QAFMENHKKLKVAKL 640
++ K ++ + Y Q F++N +L
Sbjct: 533 ELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRL 569
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 170/443 (38%), Gaps = 56/443 (12%)
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
S+ DA M + RP+ FG A K +V L + M+ FG + + +
Sbjct: 72 SIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 131
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI 353
LI+ +L ++ A + G M + + T+ ++ G G +K L
Sbjct: 132 ILINCLCRLNHVVFAISVL------GKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLF 185
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
E + V+ S +I+ G + A +L +M GC L Y + +
Sbjct: 186 NEMVRRGHQPDVISYST---VINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSL 242
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM--------- 464
CK+ +A L+ ++ G+ DV Y ++ + A LF +M
Sbjct: 243 CKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNT 302
Query: 465 ----------------REAR-IYDL---KG------SYLTIMTGLMENHRPELMAAFLDE 498
EAR +++ KG +Y +M G N++ + LD
Sbjct: 303 VTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDI 362
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+V+ V H +N +I+ +CK RL++AK L M + P+ TY +L+ G
Sbjct: 363 MVDKGCAPV-VHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVG 421
Query: 559 QYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVF 618
+ L ++ E+ G+ + L L K G D +++++ QE K+
Sbjct: 422 RPQEALNLFKEM-------CSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIE 474
Query: 619 VDKWKYKQAF--MENHKKLKVAK 639
D Y M KL+VAK
Sbjct: 475 PDIVLYNILIEGMFIAGKLEVAK 497
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 120/286 (41%), Gaps = 14/286 (4%)
Query: 218 PNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
PN ++G C G+ VS+A V E M+ G PN ++ L Y L ++
Sbjct: 300 PNTVTFTILVDGLCKEGM--VSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQ 357
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
++ +M + G + + Y+ LI+GY K L+ A ++ M + + + +T Y
Sbjct: 358 KVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLV------EMSEKELTPDTVTYS 411
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+++G Q G + NL +++ SG++ D ++ G D+A +L M
Sbjct: 412 TLMQGLCQVGRPQEALNLF---KEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSM 468
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ +Y ++ + A +L + + G+Q + Y +I+ +
Sbjct: 469 QESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLS 528
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
A+ LFR M + SY I+ G ++N +DE+V
Sbjct: 529 DEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMV 574
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 104/262 (39%), Gaps = 37/262 (14%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN Y NA ++G C Q + +A+KV++ M G P S+ L Y + ++
Sbjct: 334 EPNAYTYNALMDGYCLNNQ-MDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAK 392
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L M+E + V YS+L+ G ++G + A G + TY +
Sbjct: 393 SLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPD----LMTYSTL 448
Query: 337 VKGFLQNGNVKG------------------LANLIIE----AQKLEPSGIVVDRSVGFGI 374
+ G ++G++ L N++IE A KLE + + + GI
Sbjct: 449 LDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGI 508
Query: 375 ----------ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
I + GLSD+A+ + +M G Y ++ + + ++ A +
Sbjct: 509 QPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIR 568
Query: 425 LVMDISSSGLQLDVGNYDALIE 446
L+ ++ D + L++
Sbjct: 569 LIDEMVGKRFSADSSTFQMLLD 590
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 154/366 (42%), Gaps = 17/366 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+ Y N L + V K+ E M PN ++ L G EK
Sbjct: 120 LRPDTYTFNV-LMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKA 178
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+++ M G + Y+S+I G K G+++ A E ++ Y
Sbjct: 179 LKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKA----FFLFEEMTSEGLVATRVVYNS 234
Query: 336 VVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSILD 392
++ G ++G A L E ++ L+P + V G G+ G + +A I
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVA------GRASEARRIFQ 288
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
E GC++ + +Y + CK R EA ++ ++ GL DV ++AL++ S
Sbjct: 289 EARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSG 348
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
AF L DM+ A Y T++ GL ++ R E L E ++ E +
Sbjct: 349 RIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLE-MQSLGYEPDVVTY 407
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
N++I CK GR+EDA R + F N TY +++NG A + +++ +K+
Sbjct: 408 NTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQ 466
Query: 573 KISTDG 578
+ + DG
Sbjct: 467 E-TVDG 471
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 149/378 (39%), Gaps = 19/378 (5%)
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
LA YA GL EK VE M + Y+SLI +VK G + A +
Sbjct: 60 LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRV----- 114
Query: 322 NMEQSDFSKETYC--EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
M QS +TY ++ F + V + L E Q S V+ S+ +I A
Sbjct: 115 -MGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSI---LIDAVC 170
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
G +KA + +M + GC + Y + K +A L +++S GL
Sbjct: 171 KCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRV 230
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y++LI S +A LFR+M + ++ +++ GL R E
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQE- 289
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
D + + +N +I CK+ RL++A + P+ T+ +L++G + +
Sbjct: 290 ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGR 349
Query: 560 YFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFV 619
++ ++KR T + + L+D L K G + Q++ + Q +
Sbjct: 350 IHDAFILLGDMKRAGCT---PDVTVYNTLID----GLRKSGRVEEAGQLLLEMQSLGYEP 402
Query: 620 DKWKYKQAFMENHKKLKV 637
D Y E+ K ++
Sbjct: 403 DVVTYNTLIDESCKGGRI 420
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 104/246 (42%), Gaps = 20/246 (8%)
Query: 69 TSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFAS 128
TS+ L KS + D+A+ F+ +T+ L ++ V NSLI L RA A+
Sbjct: 198 TSMIDGLGKS---GHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLG------RSGRADAA 248
Query: 129 VVYVIEKNPKLL--DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
E K L D T +L+ + A A+ A + + + L+ L+D
Sbjct: 249 AKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLY-NVLID 307
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIET 246
K+ ++F E L+E D + P++Y NA ++G C + DA ++
Sbjct: 308 TLCKSKRLDEAWEIFGE-----LEE--DGLVPDVYTFNALMDGLCKS-GRIHDAFILLGD 359
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
M G P+ + + L G E+ +L M G+ +V Y++LI K G
Sbjct: 360 MKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGR 419
Query: 307 LESASR 312
+E A R
Sbjct: 420 IEDALR 425
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 149/352 (42%), Gaps = 20/352 (5%)
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
++ + E + G S+ +V Y+++++GY + G +E A R I G F T+
Sbjct: 113 RVADAERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLI----SGMPFPPDTF---TF 165
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+++ G V + + S VV S+ ++ A +A +LDE
Sbjct: 166 NPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSI---LLDATCKASGYRQAMVLLDE 222
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M A GC + Y + A C E EA ++ D+ S G + D Y ++++ S+
Sbjct: 223 MRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSER 282
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-EVKTHDW 512
++ LF +M + + ++ TI+T L + + +D + E + ++ T +
Sbjct: 283 WKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVT--Y 340
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+SI+ C GR++DA L R+ +P+ Y +++ G + EQ W +
Sbjct: 341 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ-------WEHAEE 393
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
++ + + + +L + G D ++VVE+ E D Y
Sbjct: 394 LMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTY 445
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 154/371 (41%), Gaps = 44/371 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP+ L+ C G + + E++ M+ P+E +F + +GL ++ +
Sbjct: 264 KPDAVTYTPVLKSLC-GSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAI 322
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
++ M+E G +V YSS++ G +G ++ A + ++ +T Y
Sbjct: 323 KVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELL------SRLKSYGCKPDTIAYT 376
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
V+KG + L+ E + S D +I++ GL D+A ++++M
Sbjct: 377 TVLKGLCSIEQWEHAEELMAE---MVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQM 433
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ GC+ + Y + C E +A +L+ ++ S G + D+ ++ L++ + +
Sbjct: 434 SENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRW 493
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMEN-------HRPELMA--------AFLDEV 499
+ A L +M + ++ T++T L + ++MA + + V
Sbjct: 494 EDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIV 553
Query: 500 VEDPRVEVKTHD-----------------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
V+ KT + +N++I KAG++E+A LR M+ P
Sbjct: 554 VDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSP 613
Query: 543 NDQTYLSLING 553
+ TY SL G
Sbjct: 614 DTITYRSLAYG 624
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 145/350 (41%), Gaps = 23/350 (6%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL--AYLYALKGLQEKI 275
P+ + N + C + V DA V + M G P+ ++ L A A G ++ +
Sbjct: 160 PDTFTFNPLIRALCVRGR-VPDALAVFDDMLHRGCSPSVVTYSILLDATCKA-SGYRQAM 217
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V L+ M G +V Y+ LI+ G+++ A L L TY
Sbjct: 218 VLLDE-MRAKGCEPDIVTYNVLINAMCNEGDVDEA----LNILSDLPSHGCKPDAVTYTP 272
Query: 336 VVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
V+K + K + L E + K P + + I+++ GL D+A ++D
Sbjct: 273 VLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNT-----IVTSLCQQGLVDRAIKVVDH 327
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M+ GC + Y L C R +A +L+ + S G + D Y +++ + +
Sbjct: 328 MSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ 387
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTH 510
++ A L +M + + ++ T++ L + + ++++ E+ P +
Sbjct: 388 WEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVT--- 444
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+NSII C ++DA L + +P+ T+ +L+ G + +++
Sbjct: 445 -YNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRW 493
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 110/268 (41%), Gaps = 23/268 (8%)
Query: 191 NSNFVAFLKVFEECC-RIALDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAE 241
N + V + + + C +D+ ++ + KP+I N L+G C + DAE
Sbjct: 439 NPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLC-SVDRWEDAE 497
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
+++ M P+ ++F + KGL + +E +M E G Y+ ++
Sbjct: 498 QLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDAL 557
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKL 359
+K G + A L L G D TY V+ + G ++ +L ++ + L
Sbjct: 558 LKAGKTQEA----LKLLSGMTNGTPDLI--TYNTVISNITKAGKMEEALDLLRVMVSNGL 611
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
P I RS+ +GI C G +D+A +L + G S Y L +C+ RT
Sbjct: 612 SPDTITY-RSLAYGI---CREDG-TDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRT 666
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEA 447
A + SSG D Y L+EA
Sbjct: 667 DIAIDCFAHMVSSGCMPDESTYIILLEA 694
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/370 (19%), Positives = 148/370 (40%), Gaps = 24/370 (6%)
Query: 193 NFVAFLKVFEECCRIA-LDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKV 243
+ V + + + C + +D+ ++ + KP+ A L+G C ++ AE++
Sbjct: 336 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLC-SIEQWEHAEEL 394
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+ M P+E +F + KGL ++ +++ M+E G + +V Y+S+I G
Sbjct: 395 MAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCN 454
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
++ A + N++ + T+ ++KG + L++
Sbjct: 455 ERCIDDAMELL------SNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMH--- 505
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
S D + +I++ GL +A L M GC Y + A K +T E
Sbjct: 506 SDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQE 565
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A +L+ +++ D+ Y+ +I + + A L R M + +Y ++
Sbjct: 566 ALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAY 623
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
G+ + L + +D + +N I+ FC+ R + A M+
Sbjct: 624 GICREDGTDRAIRMLCRL-QDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCM 682
Query: 542 PNDQTYLSLI 551
P++ TY+ L+
Sbjct: 683 PDESTYIILL 692
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 176/424 (41%), Gaps = 40/424 (9%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ N + G C + V +A+ ++ M G++PN ++G LY+ G +
Sbjct: 519 PDLFCYNCLIIGLCRA-KKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAER 577
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M G V Y+ LI G+ +GN A T L G + Y ++
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDI----RAYSAII 633
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+NG K + ++ K +G+V D + +IS G +KA + DEM
Sbjct: 634 HSLSKNGKTKEAMGVFLKFLK---TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690
Query: 398 GCSVGLGVYVPTLK--AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + + VY + YCK EA +L ++ S G+ D Y LI+ + +
Sbjct: 691 GINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLE 750
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A SLF + ++ + L ++ +++ ++ + D++V D ++ + +
Sbjct: 751 KALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMV-DKKLTPNIVTYTIL 808
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK-RKI 574
I A+ KA +E+A++ M PN TY SL+ Y F ++ ++ +++ R I
Sbjct: 809 IDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGI 868
Query: 575 STDG---------------------------QKGIKFEHNLVDAFLYALVKGGFFDAVMQ 607
+ D +GIK E ++ DA ++ L K V++
Sbjct: 869 ACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLE 928
Query: 608 VVEK 611
++ +
Sbjct: 929 LLSE 932
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 110/512 (21%), Positives = 203/512 (39%), Gaps = 59/512 (11%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQ 143
+ EA F+S+ ++ L P++ +LI N++ A +I + KL +
Sbjct: 327 SKEAKLIFESMPSSGLNPNRFTYTALI---DGFIKEGNIEEALRIKDEMITRGLKL-NVV 382
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE- 202
T + ++G + A A A +L M L G D N +LK +
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEM----------LMAGIEPDTWTYNLLIDGYLKSHDM 432
Query: 203 -ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
+ C + + + P+ + + + G C+ + A +V++ M GV+PN +G
Sbjct: 433 AKACELLAEMKARKLTPSPFTYSVLISGLCHS-SDLQKANEVLDQMIRNGVKPNVFMYGT 491
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L Y + E +EL +M G + Y+ LI G + +E A + +L+ +G
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA-KMLLVDMGEK 550
Query: 322 NMEQSD---------FSKE-----------------------TYCEVVKGFLQNGN-VKG 348
++ + +SK Y ++KG GN V+
Sbjct: 551 GIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEA 610
Query: 349 LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
L+ +K G++ D II + G + +A + + G + +Y
Sbjct: 611 LSTFKCMLEK----GLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE--ASITSQDFQSAFSLFRDMRE 466
+ +CKE +A+QL ++ +G+ ++ Y+ LI S + AF LF +M
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMIS 726
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
I Y ++ G + E + E + + +NS+I +FCK G++
Sbjct: 727 KGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSA--FNSLIDSFCKHGKVI 784
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+A+ M+ + PN TY LI+ Y AE
Sbjct: 785 EARELFDDMVDKKLTPNIVTYTILIDAYGKAE 816
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 175/441 (39%), Gaps = 82/441 (18%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN++ NA + G C +V +A +V + M G+ P+ ++ L + + ++
Sbjct: 273 KPNLFTYNAFIGGLCQ-TGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK 331
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------SRTILL------CLGGGN 322
+ M G + Y++LI G++K GN+E A +R + L + GG
Sbjct: 332 LIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGI 391
Query: 323 MEQSDFSKE-----------------TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSG 363
+ + +K TY ++ G+L++ ++ L+ E A+KL PS
Sbjct: 392 AKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP 451
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+IS + KA+ +LD+M G + +Y +KAY +E R A
Sbjct: 452 FTYSV-----LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+L+ + ++G+ D+ Y+ LI ++ + A L DM E I
Sbjct: 507 ELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGI-------------- 552
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+P H + + I+ + K+G ++ A+R + M+ PN
Sbjct: 553 ----KP------------------NAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFD 603
+ Y LI G+ L + + +KG+ + A +++L K G
Sbjct: 591 NVIYTILIKGHCDVGNTVEALSTFKCML-------EKGLIPDIRAYSAIIHSLSKNGKTK 643
Query: 604 AVMQVVEKSQEMKVFVDKWKY 624
M V K + V D + Y
Sbjct: 644 EAMGVFLKFLKTGVVPDVFLY 664
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 112/290 (38%), Gaps = 44/290 (15%)
Query: 213 LDFMK----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA--YLY 266
L F+K P+++ N+ + G C + A ++ + M G+ PN + L Y Y
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKE-GDIEKASQLYDEMLHNGINPNIVVYNTLINDYGY 708
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
G + +L M G S Y LI G K GNLE A L L ++S
Sbjct: 709 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA-----LSLFHEAQQKS 763
Query: 327 DFSKETYCEVVKGFLQNGNV----------------------------KGLANLIIEAQK 358
S + ++ F ++G V G A ++ EA++
Sbjct: 764 VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQ 823
Query: 359 L----EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
L E I+ + ++ + +G K S+ +M A G + Y AYC
Sbjct: 824 LFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYC 883
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
KE ++ EA +L+ G++L+ +DALI + + L +M
Sbjct: 884 KEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM 933
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 160/395 (40%), Gaps = 61/395 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG------- 270
P++ + G C L + +A K+++ M GV PN + + + L KG
Sbjct: 292 PDVVTYGILIHGYC-ALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALT 350
Query: 271 -----LQEKIVELESL-----------------------MNEFGFSSQMVFYSSLISGYV 302
+ K++ E++ M G ++ V Y++LI+G
Sbjct: 351 VVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLC 410
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
+ G L+ A + + L + D + TY +V G+ + G + A+ +
Sbjct: 411 RAGELKEAEKVLQEMLA----RRLDVDEVTYTVLVDGYCKRGKM---------AEAFQVH 457
Query: 363 GIVVDRSVGFGIIS-ACVNLGLSDK-----AHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+V R V +++ ++ GL + A+ +L EM+ G + Y + CK
Sbjct: 458 NTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKA 517
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+A + + D+ ++GL+ DV Y LI+A S + A L ++M + I +Y
Sbjct: 518 GYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTY 577
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+M G + R E L+ ++E + +NS++ +C ++ + M
Sbjct: 578 NVLMNGFCMSGRVEGGKKLLEWMLEK-NIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMC 636
Query: 537 FLQFEPNDQTYLSLINGYVTAE-----QYFSVLMM 566
EPN+ TY LI G+ A QYF M+
Sbjct: 637 SRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMI 671
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 9/256 (3%)
Query: 370 VGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
V +GI I LG + A +LD+M A G VY + C + R ++A +V D
Sbjct: 295 VTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVED 354
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ + LD Y ++ D SA F +M+ + +Y T++ GL
Sbjct: 355 MVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGE 414
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
+ L E++ R++V + ++ +CK G++ +A + M+ PN TY
Sbjct: 415 LKEAEKVLQEMLAR-RLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYT 473
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQV 608
+L +G + + HE+ KG++ ++ + L K G+ D M+
Sbjct: 474 ALSDGLCKQGDVQAANELLHEM-------SNKGLELNACTYNSLINGLCKAGYLDQAMRT 526
Query: 609 VEKSQEMKVFVDKWKY 624
+ + D + Y
Sbjct: 527 MADMDAAGLKPDVYTY 542
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/413 (17%), Positives = 162/413 (39%), Gaps = 52/413 (12%)
Query: 161 AFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNI 220
A +V+ M ++ + ++ L C K + V+ + F+E R L +
Sbjct: 348 ALTVVEDMVHHKVILDEAVYTTVLSGFCNK-GDLVSARRWFDEMQRKGL-------ATDG 399
Query: 221 YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
+ G C + + +AEKV++ M + +E ++ L Y +G + ++ +
Sbjct: 400 VTYTTLINGLCRAGE-LKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHN 458
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
M + G + +V Y++L G K G++++A+ +L + +E + TY ++ G
Sbjct: 459 TMVQRGVAPNVVTYTALSDGLCKQGDVQAANE-LLHEMSNKGLE---LNACTYNSLINGL 514
Query: 341 LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
+ G + + + ++ +G+ D +I A G D+AH +L EM G
Sbjct: 515 CKAGYLDQAMRTMAD---MDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIK 571
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
+ Y + +C R +L+ + + + Y++L++ + +S +
Sbjct: 572 PTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEI 631
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFC 520
++ M VE + +N +I C
Sbjct: 632 YKGMCSR------------------------------------NVEPNENTYNILIKGHC 655
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
KA +++A+ MI F +Y +LI +++ ++H+++++
Sbjct: 656 KARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKE 708
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 120/552 (21%), Positives = 213/552 (38%), Gaps = 112/552 (20%)
Query: 138 KLLDFQ----TVHTLLGSMRNANTAAPAFALVKC--MFKNRYFMPFELWGGFLVDICRKN 191
K+L+ Q T ++LL ++R+ + + +K + +N Y P + G +CR++
Sbjct: 195 KVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDG-----LCRQS 249
Query: 192 --SNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
+ V FL+ + + P++ + NA + G C + SV A+ M
Sbjct: 250 RLQDAVTFLR----------ETGGEEFGPSVVSFNALMSGFC-KMGSVDVAKSFFCMMIK 298
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G+ P+ S+ L + + G E+ +E + M G +V Y+ L +G+ LG +
Sbjct: 299 YGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISG 358
Query: 310 ASRTI-LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR 368
A + + + L G N + TY ++ G Q GN++ E+ KL+
Sbjct: 359 AWKVVQRMLLNGLNPDLV-----TYTILICGHCQMGNIE-------ESFKLK-------- 398
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
++M + G + + Y L + CK R EA L+ +
Sbjct: 399 -----------------------EKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHE 435
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ GL+ D+ Y LI + A L+ +M RIY I++GL E
Sbjct: 436 MEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGA 495
Query: 489 PELMAAFLDEVVEDPRVE---------------------VKTHD-------------WNS 514
+ D V + E V+++ +NS
Sbjct: 496 ISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNS 555
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+I+ FCK G+L +A + L + P TY +L+NGY S+ M HE++
Sbjct: 556 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEME--- 612
Query: 575 STDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYK---QAFMEN 631
K IK + L K G +Q+++ +F D+ Y Q+F +
Sbjct: 613 ----AKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKA 668
Query: 632 HKKLKVAKLRKR 643
H K +L +
Sbjct: 669 HDLQKAFQLHNQ 680
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 154/361 (42%), Gaps = 21/361 (5%)
Query: 204 CCRIALDENLDF--------MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
C R A++E ++ + PN + C+A + G + ++S+A+ ++++ V
Sbjct: 456 CKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGL-FEKGAISEAQMYFDSVTKSDVAEE 514
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
+ + YA G + V + E G S +V ++SLI G+ K G L A + +
Sbjct: 515 IILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLD 574
Query: 316 LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFG 373
G + S TY ++ G+ + G++ + +++ +EA+ ++P+ I
Sbjct: 575 TIKVHGLVPTS----VTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTV----- 625
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++ G ++ +L M A G Y ++++CK H +A QL +
Sbjct: 626 VVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHS 685
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
LQ Y+ LI + + A L +++ I K +Y TI+ +
Sbjct: 686 LQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNAL 745
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
F ++VE EV D++++I+ CK + DAK M+ P+ L ++N
Sbjct: 746 VFFHQMVERG-FEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNA 804
Query: 554 Y 554
+
Sbjct: 805 F 805
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 116/525 (22%), Positives = 193/525 (36%), Gaps = 78/525 (14%)
Query: 76 HKSLLTN--NTDEAWKSFKSLTANSLFPSKPVTNSLI----AHLSSLQDNHNLKRAFASV 129
+ SLL N +TD W + + A+ + P TN ++ S LQD R
Sbjct: 206 YNSLLYNLRHTDIMWDVYNEIKASGV-PQNEYTNPILIDGLCRQSRLQDAVTFLRETGGE 264
Query: 130 VYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMP-FELWGGFLVDIC 188
E P ++ F + + M + + A F CM +P + L +C
Sbjct: 265 ----EFGPSVVSFNALMSGFCKMGSVDVAKSFF----CMMIKYGLLPDVYSYNILLHGLC 316
Query: 189 RKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGC-CYGLQSVSDAEKVIETM 247
S EE D ++P+I N G GL +S A KV++ M
Sbjct: 317 VAGS--------MEEALEFTNDMENHGVEPDIVTYNILANGFRILGL--ISGAWKVVQRM 366
Query: 248 SVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL 307
+ G+ P+ ++ L + G E+ +L+ M G +V Y+ L+S K G +
Sbjct: 367 LLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRI 426
Query: 308 ESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSG 363
+ A ILL ME + TY ++ G + G V+ L E ++++ P+
Sbjct: 427 DEA--VILL----HEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNS 480
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC-------------------------- 397
V IIS G +A D +
Sbjct: 481 FVCS-----AIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 535
Query: 398 ---------GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
G S + + + +CK+ + AEA +L+ I GL Y L+
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 595
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
D S F + +M I + +Y ++ GL + R L + +
Sbjct: 596 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 655
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N++I +FCKA L+ A + +M+ +P+ TY LING
Sbjct: 656 I-TYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLING 699
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 156/371 (42%), Gaps = 34/371 (9%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ ++ + G C G V A ++ M + + + + + + GL +
Sbjct: 136 EPDVVTVSSLINGFCQG-NRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNAL 194
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
L M G + V Y+SL++G G A+R + +M D T+
Sbjct: 195 VLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLM------RDMVMRDIVPNVITFT 248
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGI--VVDRSVGF--GIISACVNLGLSDKAHSI 390
++ F++ G +EA+K I +D V +I G D+A I
Sbjct: 249 ALINAFVREGK-------FLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQI 301
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
LD M GC + Y + +CK R E T+LV ++S GL +D ++ +I+
Sbjct: 302 LDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQ 361
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ +A +F M +++ +Y ++ GL N R E A L E ++ +E+
Sbjct: 362 AGRPDAAQEIFSRMGSRP--NIR-TYSILLYGLCYNWRVE-KALVLFESMQKSEMELDIT 417
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE- 569
+N +IH C G +EDA + F EP+ TY ++I+G+ +W +
Sbjct: 418 TYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKR-------LWDKA 470
Query: 570 --IKRKISTDG 578
+ RK+ DG
Sbjct: 471 DFLYRKMQEDG 481
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 94/246 (38%), Gaps = 20/246 (8%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D S+ M CG L Y + C+ R A +V + G + DV +L
Sbjct: 86 DLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM-----TGLMENHRPELMAAFLDEV 499
I A L M E R Y TI+ TGL+ N A L
Sbjct: 146 INGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNN------ALVLFGR 199
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+E V T +NS++ C +GR DA R +R M+ PN T+ +LIN +V +
Sbjct: 200 MERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGK 259
Query: 560 YFSVLMMWHE-IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVF 618
+ + E I+R I D F +N + ++ L G D Q+++ F
Sbjct: 260 FLEAKKFYEEMIRRCIDPD-----VFTYN---SMIHGLCMHGQVDEAKQILDLMVTKGCF 311
Query: 619 VDKWKY 624
D Y
Sbjct: 312 PDVVTY 317
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 152/356 (42%), Gaps = 43/356 (12%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G+ P ++G L LY G K +E M G + YS L+ GYV+LG+ +A
Sbjct: 296 GLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANA 355
Query: 311 --------------------------------SRTILLCLGGGNMEQSDFSKETYCEVVK 338
+R I L LG + +TY ++
Sbjct: 356 FSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQL-LGRMKTRGCSPTIQTYITIID 414
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
GF++ G+V+ +A + KL +G + + I+ V LG D+A S++DEM G
Sbjct: 415 GFMKTGDVR-MAYKTVSEMKL--AGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAG 471
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
Y ++ + A + + ++ + + +Y +L++A + Q+A
Sbjct: 472 VQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAI 531
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT---HDWNSI 515
++ +M A + + T++ G + R ++ A+ +++ R E T H + S
Sbjct: 532 AVTEEMAFAGVPMNNYIFNTLLDGWAQ--RGDMWEAY--GIMQKMRQEGFTPDIHSYTSF 587
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
++A CKAG ++ A T+ M +PN QTY LI+G+ + L+ + E+K
Sbjct: 588 VNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMK 643
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 151/367 (41%), Gaps = 32/367 (8%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
Q++ A +E M + G+ PN ++F + Y G E + ++ + Y
Sbjct: 172 QNLQGAVSCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIY 231
Query: 295 SSLISGYVKLGNLESASRTIL--------LCLGGGNMEQSDFSK---ETYC--------- 334
SS+I Y K GN+E A + LG N+ +++ E C
Sbjct: 232 SSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKA 291
Query: 335 EVVKGFLQNGNVKG-LANLIIE----------AQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ G G L NL + ++++ GI ++R+ ++ V LG
Sbjct: 292 RIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGD 351
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
A S+ ++M+ G Y LKA+CK + A QL+ + + G + Y
Sbjct: 352 FANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYIT 411
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
+I+ + + D + A+ +M+ A +Y IM L++ + + A+ +DE +E
Sbjct: 412 IIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDE-MELA 470
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
V+ + +++ F G + A + L+R+ + +P +Y SL+ A + +
Sbjct: 471 GVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNA 530
Query: 564 LMMWHEI 570
+ + E+
Sbjct: 531 IAVTEEM 537
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 157/382 (41%), Gaps = 67/382 (17%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYAL-KGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
A E M G+ + ++ L Y + + LQ + +E + E F + F S++I
Sbjct: 142 ARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATF-SAII 200
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEA 356
SGY GN+E+A + + E + + Y ++ + + GN++ L+ +E
Sbjct: 201 SGYGSSGNVEAAEKWFQRSVS----ENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEE 256
Query: 357 QKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
Q LE + I++D I + C+N+ KA +D G S Y +
Sbjct: 257 QGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKAR--ID----TGLSPTAVTYGCLINL 310
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
Y K + +A + ++ + G+ L+ Y L++ + DF +AFS+F DM EA I
Sbjct: 311 YTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGI--- 367
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW---NSIIHAFCKAGRLEDAK 529
+P DW N ++ AFCK+ ++ A
Sbjct: 368 -----------------------------EP-------DWVTYNILLKAFCKSRQMTRAI 391
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
+ L RM P QTY+++I+G++ V M + + +S G +
Sbjct: 392 QLLGRMKTRGCSPTIQTYITIIDGFMKTG---DVRMAY----KTVSEMKLAGCRPNATTY 444
Query: 590 DAFLYALVKGGFFDAVMQVVEK 611
+ ++ LV+ G D V+++
Sbjct: 445 NVIMHNLVQLGQIDRAASVIDE 466
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 127/310 (40%), Gaps = 18/310 (5%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V A K + M + G RPN +++ + + G ++ + M G Y++
Sbjct: 422 VRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTT 481
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
L+ G+ +G + A + CL N +Y ++K + G ++ N I
Sbjct: 482 LMQGFASIGEIGLAFK----CLKRVNEITQKPPIISYASLLKACCKAGRMQ---NAIAVT 534
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+++ +G+ ++ + ++ G +A+ I+ +M G + + Y + A CK
Sbjct: 535 EEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKA 594
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+AT+ + ++ LQ ++ Y LI + + A + +M+ A + K Y
Sbjct: 595 GDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIPDKPLY 654
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
I+T L+ AA E V + ++V + + C L AK+ R ++
Sbjct: 655 YCIVTSLLSK------AAIARETVRNGVLQVTSE---MVDQGMCI--DLATAKQWQRSLM 703
Query: 537 FLQFEPNDQT 546
++ P + T
Sbjct: 704 NVERRPGELT 713
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 170/403 (42%), Gaps = 42/403 (10%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
K ++ +CN L G ++ D E V M + N SF + G +
Sbjct: 117 KLSLISCNPLLSGLVKESEN-GDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAG 175
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF-------- 328
++ M +G S ++ Y++LI GY K+G + G M ++D
Sbjct: 176 DVIEDMKVWGVSPNVITYNTLIDGYCKMGRI-------------GKMYKADAILKEMVAK 222
Query: 329 ----SKETYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLG 382
++ TY ++ GF ++ NV G + E Q+ L P+ VV ++ +I+ + G
Sbjct: 223 GICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPN--VVTYNI---LINGLCSDG 277
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
D+A ++ D+M + + + + +CK EA L D+ G+ + Y
Sbjct: 278 KVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYT 337
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
LI+A + AF+L+ M + I+ +Y ++ GL + + ++E+V
Sbjct: 338 TLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVS- 396
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
++ +N +I + CK G A + L M P+ TY +L++GY +
Sbjct: 397 KKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRA 456
Query: 563 VLMMWHEIKRKISTDGQKGIKFEHN-LVDAFLYALVKGGFFDA 604
L++ ++RK G++ HN L+ F +KG DA
Sbjct: 457 ALIVRTRMERK----GKQANVVTHNVLIKGF---CLKGRLEDA 492
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 146/370 (39%), Gaps = 53/370 (14%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+ + N + G C + ++ A VIE M V GV PN ++ L Y G K+ +
Sbjct: 154 NVISFNIVVNGLC-KVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKA 212
Query: 279 ESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
++++ E G V Y+ LI G+ K N+ A R G M++ TY
Sbjct: 213 DAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVF------GEMQRQGLRPNVVTY 266
Query: 334 CEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ G +G V L + + LEP+ VV +V +I+ ++A ++
Sbjct: 267 NILINGLCSDGKVDEAVALRDQMVSSDLEPN--VVTHNV---LINGFCKNKTVNEAINLF 321
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++M G Y + AYCK+ R +A L + G+ +V Y+ LI
Sbjct: 322 NDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRK 381
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DP----- 503
D ++A SL +M ++ +Y ++ L + LDE+ E +P
Sbjct: 382 GDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTY 441
Query: 504 ---------------------RVEVKTHDWNSIIH-----AFCKAGRLEDAKRTLRRMIF 537
R+E K N + H FC GRLEDA L M+
Sbjct: 442 NTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLE 501
Query: 538 LQFEPNDQTY 547
PN TY
Sbjct: 502 RGLVPNRTTY 511
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 139/349 (39%), Gaps = 16/349 (4%)
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVA 196
P ++ + T+ M A A++K M + P E+ L+D K+ N
Sbjct: 188 PNVITYNTLIDGYCKMGRIGKMYKADAILKEMVA-KGICPNEVTYNILIDGFCKDENVSG 246
Query: 197 FLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
++VF E R L +PN+ N + G C V +A + + M + PN
Sbjct: 247 AMRVFGEMQRQGL-------RPNVVTYNILINGLCSD-GKVDEAVALRDQMVSSDLEPNV 298
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
+ L + + + L + M + G + Y++LI Y K G +E A +
Sbjct: 299 VTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNM 358
Query: 317 CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
+ G + TY ++ G + G+VK +L+ E + S VV ++ +I
Sbjct: 359 MIDRGIFPEV----STYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNI---LID 411
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
+ G S KA +LDEM G + Y + YC+E A + + G Q
Sbjct: 412 SLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQA 471
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+V ++ LI+ + A L +M E + + +Y I +ME
Sbjct: 472 NVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMME 520
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 152/340 (44%), Gaps = 13/340 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M+P+ Y N + G C G +A V++ M G P+ ++ L + ++
Sbjct: 148 MEPDTYTYNTLIRGLC-GRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQA 206
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V+L M + G + +V Y+ +++G + G ++ A L L E + S Y
Sbjct: 207 VKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAME-FLKSLPSYGCEPNTVS---YNI 262
Query: 336 VVKGFLQNGNVKGLANLIIE-AQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDE 393
V+KG + L+ E ++K P +V F +IS GL + A ILD+
Sbjct: 263 VLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT-----FNMLISFLCRRGLVEPAMEILDQ 317
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
+ GC+ Y P L A+CK+ + A V + SSG D+ +Y+ L+ A +
Sbjct: 318 IPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGE 377
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+A L +++ + SY T++ GL + + E L+E+V ++ ++
Sbjct: 378 VDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTK-GLQPDIITYS 436
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+I C+ GR+E+A + ++ + PN Y +++ G
Sbjct: 437 TISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLG 476
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 127/286 (44%), Gaps = 17/286 (5%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y+++++GY G L++A R + ME + TY +++G G N +
Sbjct: 123 YNAMVAGYCVTGQLDNARRLV----AAMPMEPDTY---TYNTLIRGLCGRGRTD---NAL 172
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ G V D ++ A +A +LDEM GC+ + Y +
Sbjct: 173 AVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGI 232
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-REARIYDL 472
C+E R +A + + + S G + + +Y+ +++ T++ ++ A L +M R+ R ++
Sbjct: 233 CQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNV 292
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD--WNSIIHAFCKAGRLEDAKR 530
++ +++ L E LD++ P+ + +N I+HAFCK +++ A
Sbjct: 293 V-TFNMLISFLCRRGLVEPAMEILDQI---PKYGCTPNSLSYNPILHAFCKQKKMDRAMA 348
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+ M+ P+ +Y +L+ + + + + H++K K T
Sbjct: 349 FVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 394
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/405 (19%), Positives = 160/405 (39%), Gaps = 44/405 (10%)
Query: 107 NSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVK 166
N+++A N +R A++ P D T +TL+ + A A++
Sbjct: 124 NAMVAGYCVTGQLDNARRLVAAM-------PMEPDTYTYNTLIRGLCGRGRTDNALAVLD 176
Query: 167 CMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE--------------------CCR 206
M + R +P + L++ K S + +K+ +E C
Sbjct: 177 DMLR-RGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQE 235
Query: 207 IALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
+D+ ++F+K PN + N L+G C + DAEK++ MS G PN +
Sbjct: 236 GRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTA-ERWEDAEKLMAEMSRKGRPPNVVT 294
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
F L +GL E +E+ + ++G + + Y+ ++ + K ++ A + L +
Sbjct: 295 FNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 354
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
G D +Y ++ + G V L+ + + + +++ + +I
Sbjct: 355 SSGC--YPDIV--SYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT---VIDGL 407
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
G +++A +L+EM G + Y C+E R EA + + G++ +
Sbjct: 408 TKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNT 467
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
Y+A++ + SA LF M + +Y ++ GL
Sbjct: 468 VLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGL 512
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 43/202 (21%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ C RT A ++ D+ G DV Y L+EA+ ++ A L +MR+
Sbjct: 159 IRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRD--- 215
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
KG I+T +N +++ C+ GR++DA
Sbjct: 216 ---KGCAPDIVT------------------------------YNVVVNGICQEGRVDDAM 242
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
L+ + EPN +Y ++ G TAE++ + E+ RK G+ N++
Sbjct: 243 EFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRK----GRPPNVVTFNML 298
Query: 590 DAFLYALVKGGFFDAVMQVVEK 611
+F L + G + M+++++
Sbjct: 299 ISF---LCRRGLVEPAMEILDQ 317
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 145/348 (41%), Gaps = 36/348 (10%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
G + + Y++L++GY + G L++A R I +M + TY +++G G
Sbjct: 139 GTAVDVFAYNTLVAGYCRYGQLDAARRLI------ASMPVAP-DAYTYTPIIRGLCDRGR 191
Query: 346 VKGLANLIIEA--QKLEPSGIV-------VDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V +L+ + + +PS + V +S GFG +A +LDEM A
Sbjct: 192 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG------------QAMEVLDEMRA 239
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
GC+ + Y + C+E R +A + + +SS G Q D +Y +++ ++ ++
Sbjct: 240 KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 299
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
LF +M E + ++ ++ E L++ + T N +I
Sbjct: 300 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ-MSGHGCAANTTLCNIVI 358
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+ CK GR++DA + L M P+ +Y +++ G AE+ W + K +
Sbjct: 359 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER-------WEDAKELLKE 411
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+K + F+ L + G + ++E+ E V+ Y
Sbjct: 412 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 459
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 169/403 (41%), Gaps = 27/403 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ Y + G C V +A +++ M G +P+ ++ L +
Sbjct: 172 VAPDAYTYTPIIRGLC-DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQA 230
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--Y 333
+E+ M G + +V Y+ +I+G + G ++ A + + F +T Y
Sbjct: 231 MEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL------NRLSSYGFQPDTVSY 284
Query: 334 CEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
V+KG + + L E + P+ + D V F G+ ++A +L
Sbjct: 285 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG-----GMVERAIQVL 339
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++M+ GC+ + + CK+ R +A Q + ++ S G D +Y +++ +
Sbjct: 340 EQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRA 399
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ ++ A L ++M + ++ T + L + E A L E + + EV
Sbjct: 400 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIE-QATMLIEQMSEHGCEVNIVT 458
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N++++ FC GR++ A L + +PN TY +L+ G AE+ + + E+
Sbjct: 459 YNALVNGFCVQGRVDSA---LELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEML 515
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+K D + + LV F + G D +++VE+ E
Sbjct: 516 QK---DCAPNVVTFNVLVSFF----CQKGLMDEAIELVEQMME 551
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 134/336 (39%), Gaps = 47/336 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ + L+G C + DA+++++ M PNE +F + KGL E+
Sbjct: 384 PDTISYTTVLKGLCRA-ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 442
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M+E G +V Y++L++G+ G ++SA N TY ++
Sbjct: 443 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPN-------TITYTTLL 495
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + A L+ E + + + VV +V ++S GL D+A ++++M
Sbjct: 496 TGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV---LVSFFCQKGLMDEAIELVEQMMEH 552
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC+ L Y L K+ + EA +L+ + S+G+ D+ Y ++I + A
Sbjct: 553 GCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 612
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+F +V+D + K +N I+
Sbjct: 613 IKMF------------------------------------HIVQDLGMRPKAVIYNKILL 636
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A CK + A M+ PN+ TY++LI G
Sbjct: 637 ALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 672
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 106/262 (40%), Gaps = 44/262 (16%)
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
S +A ++D + G + + + ++ C+ RT++A +++ SG +DV Y+
Sbjct: 90 SPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 149
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD------ 497
L+ +A L M A +Y I+ GL + R + LD
Sbjct: 150 LVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 206
Query: 498 -------------------------EVVEDPRVEVKTHD---WNSIIHAFCKAGRLEDAK 529
EV+++ R + T + +N II+ C+ GR++DA+
Sbjct: 207 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 266
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
L R+ F+P+ +Y +++ G A++ W +++ + +K
Sbjct: 267 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKR-------WEDVEELFAEMMEKNCMPNEVTF 319
Query: 590 DAFLYALVKGGFFDAVMQVVEK 611
D + +GG + +QV+E+
Sbjct: 320 DMLVRFFCRGGMVERAIQVLEQ 341
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 147/375 (39%), Gaps = 66/375 (17%)
Query: 193 NFVAFLKVFEECCRIA-LDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKV 243
N V + + CR +D+ +F+ +P+ + L+G C + D E++
Sbjct: 245 NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA-KRWEDVEEL 303
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
M PNE +F L + G+ E+ +++ M+ G ++ + +I+ K
Sbjct: 304 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 363
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEA--QKL 359
G ++ A + + NM S +T Y V+KG + + L+ E +
Sbjct: 364 QGRVDDAFQFL------NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 417
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
P+ + + I GL ++A ++++M+ GC V + Y + +C + R
Sbjct: 418 PPNEVTFNT-----FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 472
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A +L + + +Y T+
Sbjct: 473 DSALELFYSMPCKPNTI--------------------------------------TYTTL 494
Query: 480 MTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+TGL R + A L E+++ D V T +N ++ FC+ G +++A + +M+
Sbjct: 495 LTGLCNAERLDAAAELLAEMLQKDCAPNVVT--FNVLVSFFCQKGLMDEAIELVEQMMEH 552
Query: 539 QFEPNDQTYLSLING 553
PN TY +L++G
Sbjct: 553 GCTPNLITYNTLLDG 567
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 94/249 (37%), Gaps = 45/249 (18%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN L G C + + A +++ M PN +F L + KGL ++ +
Sbjct: 485 KPNTITYTTLLTGLCNA-ERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 543
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
EL M E G + ++ Y++L+ G K D + E E+
Sbjct: 544 ELVEQMMEHGCTPNLITYNTLLDGITK-----------------------DCNSEEALEL 580
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ G + NG + P +V S G++S + + K I+ ++
Sbjct: 581 LHGLVSNG--------------VSPD--IVTYSSIIGVLSREDRVEEAIKMFHIVQDL-- 622
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF-Q 455
G +Y L A CK T A + S+G + Y LIE + ++DF +
Sbjct: 623 -GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG-LANEDFLK 680
Query: 456 SAFSLFRDM 464
L R++
Sbjct: 681 ETRDLLREL 689
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 176/422 (41%), Gaps = 60/422 (14%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ + N + G C ++ A +V M +PN ++ + L + V
Sbjct: 198 EPNVISYNTVINGLCKNGNTIM-AVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
E S M + G +V Y++++ G+ LG L A+R +G M + T+ +
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDT----VTFNIL 312
Query: 337 VKGFLQNGNV---KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
V G + G V + ++ + E + EP+ + + C++ + D+A +L
Sbjct: 313 VDGLCKEGMVSEARCVSETMTE-KGAEPNAYTYNALMD----GYCLHNQM-DEAIKVLGI 366
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M GC+ L Y + YCK R EA +L+ ++S L D Y L++
Sbjct: 367 MIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGR 426
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A +LF++M +GL+ P+LMA ++
Sbjct: 427 PREALNLFKEM--------------CSSGLL----PDLMA------------------YS 450
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++ FCK G L++A + L+ M + +PN Y LI G A + L + E+ K
Sbjct: 451 ILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGK----LEVAKELFSK 506
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYK---QAFME 630
+S DG + + +N++ + L+K G D + K ++ D Y Q F++
Sbjct: 507 LSADGIRPDIWTYNVM---IKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQ 563
Query: 631 NH 632
N
Sbjct: 564 NQ 565
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 124/286 (43%), Gaps = 14/286 (4%)
Query: 218 PNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P+ N ++G C G+ VS+A V ETM+ G PN ++ L Y L ++ +
Sbjct: 304 PDTVTFNILVDGLCKEGM--VSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAI 361
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
++ +M G + + Y+ LI+GY K + A R + M + + + +T Y
Sbjct: 362 KVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLL------SEMSEKNLTPDTVTYS 415
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+++G Q G + NL E + SG++ D ++ G D+A +L EM
Sbjct: 416 TLMQGLCQVGRPREALNLFKE---MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEM 472
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ + +Y ++ + A +L +S+ G++ D+ Y+ +I+ +
Sbjct: 473 HERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLS 532
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
A+ FR M + SY I+ G ++N +DE+V
Sbjct: 533 DEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMV 578
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 146/353 (41%), Gaps = 27/353 (7%)
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
S+ DA M + RP+ FG A K V L + M+ FG + + +
Sbjct: 76 SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVK---GLA 350
LI+ +L +++ A + G M + + T+ ++ G G +K GL
Sbjct: 136 VLINCLCRLSHVDFAVSVM------GKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLF 189
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
N ++ + EP+ I + +I+ G + A + +M + Y +
Sbjct: 190 NEMVWSGH-EPNVISYNT-----VINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTII 243
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
+ CK+ EA + + ++ G+ DV Y+ ++ + A LF++M +
Sbjct: 244 DSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVM 303
Query: 471 DLKGSYLTIMTGLM-ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
++ ++ GL E E A + E + + E + +N+++ +C ++++A
Sbjct: 304 PDTVTFNILVDGLCKEGMVSE--ARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAI 361
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGI 582
+ L MI PN +Y LINGY +++ +E KR +S +K +
Sbjct: 362 KVLGIMIGKGCAPNLSSYNILINGYCKSKR-------MNEAKRLLSEMSEKNL 407
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 161/424 (37%), Gaps = 62/424 (14%)
Query: 65 QDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKR 124
+ N+ S T ++ NT A + F+ + N P+ N++I SL + +
Sbjct: 198 EPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTII---DSLCKDRLVNE 254
Query: 125 AFASVVYVIEKN--PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGG 182
A + ++++ P ++ + T+ S+ N A F R MP +
Sbjct: 255 AVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFK----EMVGRNVMPDTVTFN 310
Query: 183 FLVD-ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
LVD +C++ A C + E +PN Y NA ++G C Q + +A
Sbjct: 311 ILVDGLCKEGMVSEA------RCVSETMTEK--GAEPNAYTYNALMDGYCLHNQ-MDEAI 361
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
KV+ M G PN SS+ L Y + L S M+E + V YS+L+ G
Sbjct: 362 KVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGL 421
Query: 302 VKLGNLESA-----------------SRTILL---CLGGGNMEQSDFSKET--------- 332
++G A + +ILL C G E KE
Sbjct: 422 CQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNI 481
Query: 333 --YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
Y +++G G ++ L KL GI D +I + GLSD+A+
Sbjct: 482 ILYTILIRGMFIAGKLEVAKELF---SKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEF 538
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV---------MDISSSGLQLDVGNY 441
+M G Y ++ + + ++ A QL+ D S+ + LD+ ++
Sbjct: 539 FRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDLESH 598
Query: 442 DALI 445
D +I
Sbjct: 599 DEII 602
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 115/503 (22%), Positives = 200/503 (39%), Gaps = 79/503 (15%)
Query: 188 CRKNSNFVAFLKVFEE-CCRIALDENLD-FMK-------PNIYACNAALEGCCYGLQSVS 238
CR+N VA+ + C +DE +D F+K P + ++ C G + S
Sbjct: 284 CRRNE--VAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALC-GSERKS 340
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+A +++ M G++PN ++ L + EK EL M E G ++ Y++LI
Sbjct: 341 EALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALI 400
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVK--GLANLII 354
+GY K G +E A + L ME + + TY E++KG+ + K G+ N ++
Sbjct: 401 NGYCKRGMIEDALDVVEL------MESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKML 454
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
E +K+ P + + +I G D A+ +L MN G Y + + C
Sbjct: 455 E-RKVLPDVVTYN-----SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLC 508
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
K R EA L + + +V Y ALI+ + A + M
Sbjct: 509 KSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSL 568
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKT---------------------- 509
++ ++ GL + + + +++V+ P V T
Sbjct: 569 TFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQM 628
Query: 510 ---------HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
H + + I +C+ GRL+DA+ + +M P+ TY SLI GY +
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRT 688
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL---YALVKGG-----------FFDAVM 606
S ++ +KR T + +L+ L Y VKGG FD V+
Sbjct: 689 NSAFVV---LKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVV 745
Query: 607 QVVEKSQEMKVFVDKWKYKQAFM 629
+++EK E V + Y++ +
Sbjct: 746 ELLEKMVEHGVTPNAKSYEKLML 768
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 143/358 (39%), Gaps = 57/358 (15%)
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
GL +++ ++ M E + Y+ +++GY K+GN+E A++ + + + G DF
Sbjct: 197 GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAG--LDPDFF 254
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
TY ++ G+ Q ++ D A
Sbjct: 255 --TYTSLIMGYCQRKDL--------------------------------------DSAFK 274
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ EM GC Y + C E R EA L + + V Y LI+A
Sbjct: 275 VFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALC 334
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVE 506
S+ A +L ++M E I +Y ++ L + E L +++E P V
Sbjct: 335 GSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVI 394
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+N++I+ +CK G +EDA + M PN +TY LI GY + ++ ++
Sbjct: 395 T----YNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVL 450
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
++RK+ D + ++L+D + G FD+ +++ + + D W Y
Sbjct: 451 NKMLERKVLPD----VVTYNSLID----GQCRSGNFDSAYRLLSLMNDRGLVPDPWTY 500
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 83/216 (38%), Gaps = 36/216 (16%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++++ GL D+ + EM + Y + YCK EA Q V I +G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAG 248
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMR--------------------EARI---- 469
L D Y +LI +D SAF +F++M E RI
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAM 308
Query: 470 -----------YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
Y +Y ++ L + R + E +E+ ++ H + +I +
Sbjct: 309 DLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKE-MEEKGIKPNIHTYTVLIDS 367
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
C +LE A+ L +M+ PN TY +LINGY
Sbjct: 368 LCSQCKLEKARELLGQMLEKGLMPNVITYNALINGY 403
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLK-----GSYLTIMTGLMENHRPELMAAFLDE 498
+I++ + D L R M + ++LK G Y T++ L + M E
Sbjct: 149 MIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYME 208
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
++ED +V + +N +++ +CK G +E+A + + ++ +P+ TY SLI GY +
Sbjct: 209 MLED-KVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 559 QYFSVLMMWHEIKRK 573
S ++ E+ K
Sbjct: 268 DLDSAFKVFKEMPLK 282
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 145/348 (41%), Gaps = 36/348 (10%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
G + + Y++L++GY + G L++A R I +M + TY +++G G
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLI------ASMPVAP-DAYTYTPIIRGLCDRGR 160
Query: 346 VKGLANLIIEA--QKLEPSGIV-------VDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V +L+ + + +PS + V +S GFG +A +LDEM A
Sbjct: 161 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG------------QAMEVLDEMRA 208
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
GC+ + Y + C+E R +A + + +SS G Q D +Y +++ ++ ++
Sbjct: 209 KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
LF +M E + ++ ++ E L++ + T N +I
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ-MSGHGCAANTTLCNIVI 327
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+ CK GR++DA + L M P+ +Y +++ G AE+ W + K +
Sbjct: 328 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER-------WEDAKELLKE 380
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+K + F+ L + G + ++E+ E V+ Y
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 169/403 (41%), Gaps = 27/403 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ Y + G C V +A +++ M G +P+ ++ L +
Sbjct: 141 VAPDAYTYTPIIRGLC-DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQA 199
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--Y 333
+E+ M G + +V Y+ +I+G + G ++ A + + F +T Y
Sbjct: 200 MEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL------NRLSSYGFQPDTVSY 253
Query: 334 CEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
V+KG + + L E + P+ + D V F G+ ++A +L
Sbjct: 254 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG-----GMVERAIQVL 308
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++M+ GC+ + + CK+ R +A Q + ++ S G D +Y +++ +
Sbjct: 309 EQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRA 368
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ ++ A L ++M + ++ T + L + E A L E + + EV
Sbjct: 369 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIE-QATMLIEQMSEHGCEVNIVT 427
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N++++ FC GR++ A L + +PN TY +L+ G AE+ + + E+
Sbjct: 428 YNALVNGFCVQGRVDSA---LELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEML 484
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+K D + + LV F + G D +++VE+ E
Sbjct: 485 QK---DCAPNVVTFNVLVSFF----CQKGLMDEAIELVEQMME 520
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 133/336 (39%), Gaps = 47/336 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ + L+G C + DA+++++ M PNE +F + KGL E+
Sbjct: 353 PDTISYTTVLKGLCRA-ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M+E G +V Y++L++G+ G ++SA N TY ++
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPN-------TITYTTLL 464
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + A L+ E + + + VV +V ++S GL D+A ++++M
Sbjct: 465 TGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV---LVSFFCQKGLMDEAIELVEQMMEH 521
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC+ L Y L + + EA +L+ + S+G+ D+ Y ++I + A
Sbjct: 522 GCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 581
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+F +V+D + K +N I+
Sbjct: 582 IKMF------------------------------------HIVQDLGMRPKAVIYNKILL 605
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A CK + A M+ PN+ TY++LI G
Sbjct: 606 ALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 641
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 48/244 (19%)
Query: 405 VYVPT--LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
VY+ T ++ C+ RT++A +++ SG +DV Y+ L+ +A L
Sbjct: 78 VYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIA 137
Query: 463 DMREA-RIYDLKGSYLTIMTGLMENHRPELMAAFLD------------------------ 497
M A Y +Y I+ GL + R + LD
Sbjct: 138 SMPVAPDAY----TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKS 193
Query: 498 -------EVVEDPRVEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
EV+++ R + T + +N II+ C+ GR++DA+ L R+ F+P+ +Y
Sbjct: 194 TGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 253
Query: 548 LSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQ 607
+++ G A++ W +++ + +K D + +GG + +Q
Sbjct: 254 TTVLKGLCAAKR-------WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQ 306
Query: 608 VVEK 611
V+E+
Sbjct: 307 VLEQ 310
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 147/375 (39%), Gaps = 66/375 (17%)
Query: 193 NFVAFLKVFEECCRIA-LDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKV 243
N V + + CR +D+ +F+ +P+ + L+G C + D E++
Sbjct: 214 NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA-KRWEDVEEL 272
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
M PNE +F L + G+ E+ +++ M+ G ++ + +I+ K
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEA--QKL 359
G ++ A + + NM S +T Y V+KG + + L+ E +
Sbjct: 333 QGRVDDAFQFL------NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
P+ + + I GL ++A ++++M+ GC V + Y + +C + R
Sbjct: 387 PPNEVTFNT-----FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A +L + + +Y T+
Sbjct: 442 DSALELFYSMPCKPNTI--------------------------------------TYTTL 463
Query: 480 MTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+TGL R + A L E+++ D V T +N ++ FC+ G +++A + +M+
Sbjct: 464 LTGLCNAERLDAAAELLAEMLQKDCAPNVVT--FNVLVSFFCQKGLMDEAIELVEQMMEH 521
Query: 539 QFEPNDQTYLSLING 553
PN TY +L++G
Sbjct: 522 GCTPNLITYNTLLDG 536
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 191/468 (40%), Gaps = 40/468 (8%)
Query: 163 ALVKCMFKNRY-FMPFELWGGFLVD--ICRKNSNFVAFLKVFEECCRIALDENLDFMKPN 219
AL NR+ F P L ++D + R +SN + +++ R+ D + + PN
Sbjct: 151 ALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNH----RDYDDAERVFRDMVRNGVSPN 206
Query: 220 IYACNAALEGCCYGLQSVSDAEKVIETMSVL---GVRPNESSFGFLAYLYALKGLQEKIV 276
+Y N + G + S D EK + M + G+ PN ++ L K ++ +
Sbjct: 207 VYTYNVIIRG----VVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAM 262
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L M G ++ ++ Y+S+I+G G + + G G + + TY +
Sbjct: 263 ALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPD----EVTYNTL 318
Query: 337 VKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
V GF + GN+ L+ E + L P+ + +I+ G +A I D+M
Sbjct: 319 VNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTT-----LINCMCKAGNLSRAVEIFDQM 373
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G Y + +C++ EA +++ ++ SG V Y+AL+
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWN 513
Q A + R M E + SY T++ G EL AF + E + + V T ++
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRER--ELGKAFQMKEEMVEKGVLPDTVTYS 491
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
S+I C +L +A R M+ P++ TY SLIN Y + L + E+
Sbjct: 492 SLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMV-- 549
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
Q+G L D Y+++ G V K +K+F ++
Sbjct: 550 -----QRGF-----LPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEE 587
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 166/409 (40%), Gaps = 71/409 (17%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQEKIVE 277
N+ + N+ + G C G +S+ +++E M G+ P+E ++ L + +G L + +V
Sbjct: 276 NLISYNSVINGLC-GKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVL 334
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCE 335
L ++ + G S +V Y++LI+ K GNL A M ++ TY
Sbjct: 335 LSEMVGK-GLSPNVVTYTTLINCMCKAGNLSRAVEIF------DQMRVRGLRPNERTYTT 387
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN----LGLSDKAHSIL 391
++ GF Q KGL N EA K+ IV S +A V+ LG +A IL
Sbjct: 388 LIDGFCQ----KGLMN---EAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGIL 440
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
M G + Y + +C+E +A Q+ ++ G+ D Y +LI+
Sbjct: 441 RGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQ 500
Query: 452 QDFQSAFSLFRDM--------------------------REARIYD---LKG------SY 476
Q AF LFR+M + R++D +G +Y
Sbjct: 501 QKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTY 560
Query: 477 LTIMTGLMENHRPE-----LMAAFLDEVVEDPRV------EVKTHDWNSI---IHAFCKA 522
++ GL + R + L+ F +E V D +++ S+ + FC
Sbjct: 561 SVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMK 620
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
G + +A R + M+ +PN Y +I+G+ ++ E++
Sbjct: 621 GLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELE 669
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 145/342 (42%), Gaps = 12/342 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ + + C V +A ++ M LGV PN ++ L Y G E
Sbjct: 224 PDVFMVSIMVNAFCKD-GKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKG 282
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCE 335
+ M+E G S +V Y+ LI GY K ++ A + + G E++ + Y
Sbjct: 283 VLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLR-----GMQEEAALVPDERAYGV 337
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ + G + L+ E +L G+ + + +I+ G +A ++ M
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRL---GLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
Y L YC+E T+EA L + G++ V Y+ L++ F
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A ++ M + + + Y T++ GL + E + +++ + + +N++
Sbjct: 455 DALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI-TFNTM 513
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
I CK G++ +A+ +M L P+ TY +LI+GY A
Sbjct: 514 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKA 555
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/466 (20%), Positives = 174/466 (37%), Gaps = 81/466 (17%)
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG 233
+P E G L+D + +++ +E R+ L K N++ CN+ + G C
Sbjct: 328 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL-------KTNLFICNSLINGYC-K 379
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
+ +AE VI M ++P+ S+ L Y +G + L M + G ++
Sbjct: 380 RGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLT 439
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y++L+ G ++G + A + L + G + Y ++ G + N +G + L
Sbjct: 440 YNTLLKGLCRVGAFDDALQIWHLMMKRGVAPD----EVGYSTLLDGLFKMENFEGASTL- 494
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ + G R +IS +G +A I D+M GCS Y + Y
Sbjct: 495 --WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 552
Query: 414 C-----------------------------------KEHRTAEATQLVMDISSSGLQLDV 438
C K R E T L+ ++ GL ++
Sbjct: 553 CKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNI 612
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL--------------- 483
Y ALI+ AFS + +M E + T+++GL
Sbjct: 613 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 672
Query: 484 MENH----------RPELMAAFLDEVVEDPRVEVKTH------DWNSIIHAFCKAGRLED 527
M +H + ++ A + ++ + KT +N I CK G+++D
Sbjct: 673 MVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
A+R + F P++ TY +LI+GY A + E+ R+
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 778
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 153/346 (44%), Gaps = 16/346 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+I N+ + G + + + + ++ M + G+ PN ++G L + +G+ +K
Sbjct: 573 ISPSIEMYNSLISGL-FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
M E G S+ ++ S+++SG +LG ++ A+ + M F + C
Sbjct: 632 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM------QKMVDHGFFPDHEC- 684
Query: 336 VVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+K ++ ++ +A+ + E+ K L P+ IV + + I+ G D A
Sbjct: 685 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIA-----IAGLCKTGKVDDARRFFSM 739
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
++ G Y + Y EA +L ++ GL ++ Y+ALI S++
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A LF + + ++ +Y T++ G + + D+++E+ + ++
Sbjct: 800 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG-ISPSVVTYS 858
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
++I+ CK G +E + + L +MI + Y +L+ GY+ + +
Sbjct: 859 ALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGE 904
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 80/173 (46%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G + AH + +M G + + + A+CK+ + EA V + + G++ ++ Y
Sbjct: 205 GETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTY 264
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+LI ++ D ++A + + M E + +Y ++ G + + + L + E
Sbjct: 265 HSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQE 324
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ + + +I +C+ G+++DA R L M+ L + N SLINGY
Sbjct: 325 EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 377
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
Q++ GIV D + +++A G D+A + +M G + Y + Y
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 274
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE-ARIYDLKGS 475
A ++ +S G+ +V Y LI+ A + R M+E A + + +
Sbjct: 275 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 334
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW--NSIIHAFCKAGRLEDAKRTLR 533
Y ++ G + + LDE++ R+ +KT+ + NS+I+ +CK G + +A+ +
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEML---RLGLKTNLFICNSLINGYCKRGEIHEAEGVIT 391
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
RM+ +P+ +Y +L++GY + ++ Q+GI+ + L
Sbjct: 392 RMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML-------QEGIEPTVLTYNTLL 444
Query: 594 YALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
L + G FD +Q+ + V D+ Y
Sbjct: 445 KGLCRVGAFDDALQIWHLMMKRGVAPDEVGY 475
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 171/434 (39%), Gaps = 81/434 (18%)
Query: 188 CRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETM 247
CR+ AF C L E ++ P + N L+G C + + DA ++ M
Sbjct: 413 CREGHTSEAF-----NLCDKMLQEGIE---PTVLTYNTLLKGLCR-VGAFDDALQIWHLM 463
Query: 248 SVLGVRPNESSF--------------------------GF----LAYLYALKGLQE--KI 275
GV P+E + GF + + + GL + K+
Sbjct: 464 MKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKM 523
Query: 276 VELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK-- 330
VE E + M + G S + Y +LI GY K N+ A + G ME+ S
Sbjct: 524 VEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV------KGAMEREPISPSI 577
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFG-IISACVNLGLSDKA 387
E Y ++ G ++ + + +L+ E + L P+ V +G +I G+ DKA
Sbjct: 578 EMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPN------IVTYGALIDGWCKEGMLDKA 631
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG--------LQLDVG 439
S EM G S + + + + R EA L+ + G L+ D+
Sbjct: 632 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI- 690
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y A+ + + + + F L ++ +Y++ + L TG +++ R L
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNI----VYNIAIAGLC-KTGKVDDARRFFSMLSLKGF 745
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
V D + ++IH + AG +++A R M+ PN TY +LING +E
Sbjct: 746 VPD------NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799
Query: 560 YFSVLMMWHEIKRK 573
++H++ +K
Sbjct: 800 VDRAQRLFHKLHQK 813
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 95/262 (36%), Gaps = 45/262 (17%)
Query: 208 ALDENLD-FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
+LDE+ F+ PN N A+ G C V DA + +S+ G P+ ++ L + Y
Sbjct: 701 SLDESCKTFLLPNNIVYNIAIAGLC-KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 759
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
+ G ++ L M G +V Y++LI+G K N++ A R
Sbjct: 760 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLF------------ 807
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
KL G+ + +I +G D
Sbjct: 808 ------------------------------HKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 837
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + D+M G S + Y + CK + +L+ + +G+ + Y L++
Sbjct: 838 AFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQ 897
Query: 447 ASITSQDFQSAFSLFRDMREAR 468
I S + Q L+ DM R
Sbjct: 898 GYIRSGEMQKIHKLY-DMMHIR 918
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 145/365 (39%), Gaps = 27/365 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+Y N ++G C L + A ++ + M G+ P+ +FG L G +
Sbjct: 250 PNVYTYNTLMDGYC-KLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARN 308
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
L M +F + + Y+SLI Y K+G++ A L +E+ + S + TY
Sbjct: 309 LFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFL------ELERFEVSPDVFTYSI 362
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+++G + N+ +K+ GI+ + +I C G DKA I +M
Sbjct: 363 LIRGLCSVSRTEEAGNIF---EKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMT 419
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + + + YCK A + ++ L DV Y A+I+ +
Sbjct: 420 ENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMK 479
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE--DPRVEVKTHD-- 511
A L+ DM + I + ++ GL ++ + E +E PR V
Sbjct: 480 EALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSK 539
Query: 512 --------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+ ++IH C+ G+ A + M +P++ Y+ ++ G Q +
Sbjct: 540 PSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLF---QVKYI 596
Query: 564 LMMWH 568
LMM H
Sbjct: 597 LMMLH 601
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 140/368 (38%), Gaps = 90/368 (24%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QE 273
+ P++ ++GCC + A+++ + M V G+ P + Y ++GL
Sbjct: 178 LSPSVITFGTLIDGCCRQ-GDLLRAQEMFDEMRVKGIVPT-----VIVYTILIRGLCSDN 231
Query: 274 KIVELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
KI E ES+ M E G + Y++L+ GY KL N + A R
Sbjct: 232 KIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALR------------------ 273
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
+ + L G V + GI++D FG + A NL ++ S+
Sbjct: 274 -----LYQDMLGEGLVPDVVTF----------GILIDGLCKFGEMKAARNLFVNMIKFSV 318
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+ + VY + AYCK +EA L +++ + DV Y LI +
Sbjct: 319 ---------TPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCS 369
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ A ++F M + G++ N +
Sbjct: 370 VSRTEEAGNIFEKMTKE--------------GILAN----------------------SV 393
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE- 569
+NS+I CK G+++ A +M EPN T+ +LI+GY + + ++ E
Sbjct: 394 TYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEM 453
Query: 570 IKRKISTD 577
+ + +S D
Sbjct: 454 VIKSLSPD 461
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 4/190 (2%)
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
I +EM + G S + + + C++ A ++ ++ G+ V Y LI
Sbjct: 169 IYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLC 228
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME-NHRPELMAAFLDEVVEDPRVEVK 508
+ + A S+ R MRE +Y +Y T+M G + + + + + D + E +V
Sbjct: 229 SDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVV 288
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
T + +I CK G ++ A+ MI PN Y SLI+ Y + ++
Sbjct: 289 T--FGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFL 346
Query: 569 EIKR-KISTD 577
E++R ++S D
Sbjct: 347 ELERFEVSPD 356
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 141/325 (43%), Gaps = 25/325 (7%)
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS--RTIL--LCLGGGNMEQ 325
G+ + L L+N F + + F S+ + +K G +A T++ LC G
Sbjct: 91 GITPDLCTLSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRA 150
Query: 326 SDFSKE-----------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
F + +Y ++ G + G K +A L+ +KLE + D + I
Sbjct: 151 LHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLL---RKLEGHSVKPDLVMYTTI 207
Query: 375 ISA-CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
I C N L D A + EM G S + Y + +C EA L+ ++
Sbjct: 208 IHCLCKNKLLGD-ACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKN 266
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ DV ++ LI+A A SLF +M+ ++ +Y +++ GL +NH E
Sbjct: 267 INPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAI 326
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A ++ E ++ + + ++ A CK GRLE+AK+ + ++ + N +TY +ING
Sbjct: 327 ALCKKMKEQ-GIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMING 385
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDG 578
A + V+ ++K K+ G
Sbjct: 386 LCKAGLFGDVM----DLKSKMEGKG 406
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 145/348 (41%), Gaps = 36/348 (10%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
G + + Y++L++GY + G L++A R I +M + TY +++G G
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLI------ASMPVAP-DAYTYTPIIRGLCDRGR 160
Query: 346 VKGLANLIIEA--QKLEPSGIV-------VDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V +L+ + + +PS + V +S GFG +A +LDEM A
Sbjct: 161 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG------------QAMEVLDEMRA 208
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
GC+ + Y + C+E R +A + + +SS G Q D +Y +++ ++ ++
Sbjct: 209 KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
LF +M E + ++ ++ E L++ + T N +I
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ-MSGHGCAANTTLCNIVI 327
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+ CK GR++DA + L M P+ +Y +++ G AE+ W + K +
Sbjct: 328 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER-------WEDAKELLKE 380
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+K + F+ L + G + ++E+ E V+ Y
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 169/403 (41%), Gaps = 27/403 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ Y + G C V +A +++ M G +P+ ++ L +
Sbjct: 141 VAPDAYTYTPIIRGLC-DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQA 199
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--Y 333
+E+ M G + +V Y+ +I+G + G ++ A + + F +T Y
Sbjct: 200 MEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL------NRLSSYGFQPDTVSY 253
Query: 334 CEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
V+KG + + L E + P+ + D V F G+ ++A +L
Sbjct: 254 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG-----GMVERAIQVL 308
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++M+ GC+ + + CK+ R +A Q + ++ S G D +Y +++ +
Sbjct: 309 EQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRA 368
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ ++ A L ++M + ++ T + L + E A L E + + EV
Sbjct: 369 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIE-QATMLIEQMSEHGCEVNIVT 427
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N++++ FC GR++ A L + +PN TY +L+ G AE+ + + E+
Sbjct: 428 YNALVNGFCVQGRVDSA---LELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEML 484
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+K D + + LV F + G D +++VE+ E
Sbjct: 485 QK---DCAPNVVTFNVLVSFF----CQKGLMDEAIELVEQMME 520
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 134/336 (39%), Gaps = 47/336 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ + L+G C + DA+++++ M PNE +F + KGL E+
Sbjct: 353 PDTISYTTVLKGLCRA-ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M+E G +V Y++L++G+ G ++SA N TY ++
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPN-------TITYTTLL 464
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + A L+ E + + + VV +V ++S GL D+A ++++M
Sbjct: 465 TGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV---LVSFFCQKGLMDEAIELVEQMMEH 521
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC+ L Y L K+ + EA +L+ + S+G+ D+ Y ++I + A
Sbjct: 522 GCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 581
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+F +V+D + K +N I+
Sbjct: 582 IKMF------------------------------------HIVQDLGMRPKAVIYNKILL 605
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A CK + A M+ PN+ TY++LI G
Sbjct: 606 ALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 641
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 48/244 (19%)
Query: 405 VYVPT--LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
VY+ T ++ C+ RT++A +++ SG +DV Y+ L+ +A L
Sbjct: 78 VYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIA 137
Query: 463 DMREA-RIYDLKGSYLTIMTGLMENHRPELMAAFLD------------------------ 497
M A Y +Y I+ GL + R + LD
Sbjct: 138 SMPVAPDAY----TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKS 193
Query: 498 -------EVVEDPRVEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
EV+++ R + T + +N II+ C+ GR++DA+ L R+ F+P+ +Y
Sbjct: 194 TGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 253
Query: 548 LSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQ 607
+++ G A++ W +++ + +K D + +GG + +Q
Sbjct: 254 TTVLKGLCAAKR-------WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQ 306
Query: 608 VVEK 611
V+E+
Sbjct: 307 VLEQ 310
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 147/375 (39%), Gaps = 66/375 (17%)
Query: 193 NFVAFLKVFEECCRIA-LDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKV 243
N V + + CR +D+ +F+ +P+ + L+G C + D E++
Sbjct: 214 NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA-KRWEDVEEL 272
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
M PNE +F L + G+ E+ +++ M+ G ++ + +I+ K
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEA--QKL 359
G ++ A + + NM S +T Y V+KG + + L+ E +
Sbjct: 333 QGRVDDAFQFL------NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
P+ + + I GL ++A ++++M+ GC V + Y + +C + R
Sbjct: 387 PPNEVTFNT-----FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A +L + + +Y T+
Sbjct: 442 DSALELFYSMPCKPNTI--------------------------------------TYTTL 463
Query: 480 MTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+TGL R + A L E+++ D V T +N ++ FC+ G +++A + +M+
Sbjct: 464 LTGLCNAERLDAAAELLAEMLQKDCAPNVVT--FNVLVSFFCQKGLMDEAIELVEQMMEH 521
Query: 539 QFEPNDQTYLSLING 553
PN TY +L++G
Sbjct: 522 GCTPNLITYNTLLDG 536
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 94/249 (37%), Gaps = 45/249 (18%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN L G C + + A +++ M PN +F L + KGL ++ +
Sbjct: 454 KPNTITYTTLLTGLCNA-ERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 512
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
EL M E G + ++ Y++L+ G K D + E E+
Sbjct: 513 ELVEQMMEHGCTPNLITYNTLLDGITK-----------------------DCNSEEALEL 549
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ G + NG + P +V S G++S + + K I+ ++
Sbjct: 550 LHGLVSNG--------------VSPD--IVTYSSIIGVLSREDRVEEAIKMFHIVQDL-- 591
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF-Q 455
G +Y L A CK T A + S+G + Y LIE + ++DF +
Sbjct: 592 -GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG-LANEDFLK 649
Query: 456 SAFSLFRDM 464
L R++
Sbjct: 650 ETRDLLREL 658
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 182/451 (40%), Gaps = 58/451 (12%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
++H LL ++ +APAFAL MF+ R + + L +C A L++ +
Sbjct: 12 SLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARA-LELLRQ 66
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
R PN N + G C + + + + E G+ PN+ ++G +
Sbjct: 67 MPR-----------PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVI 115
Query: 264 YLYALKG-LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ G + E + + ++ + + V Y++LI GY G L++A LL
Sbjct: 116 SGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA----LLYRDRMV 171
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ TY +V +G L+ +++ G+ D +I+ G
Sbjct: 172 ERGVAMTVATYNLLVHALFMDGRGTEAYELV---EEMGGKGLAPDVFTYNILINGHCKEG 228
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
KA I + M+ G + Y + A K+ + E +L + G++ D+ Y+
Sbjct: 229 NVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 288
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE- 501
ALI + TS + AF + +M + RI +Y T+M GL R + +DE+ +
Sbjct: 289 ALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKR 348
Query: 502 --------------------DPRVEVKTHD-------------WNSIIHAFCKAGRLEDA 528
D + ++ + +N++I CK G+ +DA
Sbjct: 349 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 408
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ ++ M+ P+D TY+SLI G T ++
Sbjct: 409 ENMVKEMVENGITPDDSTYISLIEGLTTEDE 439
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 185/483 (38%), Gaps = 99/483 (20%)
Query: 193 NFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
+FV L +E + L L P++ + + + G C + K+IE M G+
Sbjct: 697 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR-FGELDKVWKLIEVMKRKGL 755
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEF------GFSSQMVFYSSLISGYVKLGN 306
+PN +G ++ GL +I +L F G V Y++LI G+ K G+
Sbjct: 756 KPNSYIYG------SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809
Query: 307 LESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPS 362
+ +AS+ M D + + TY ++ GF Q G++ L E + LEP
Sbjct: 810 IRAASKFFY------EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 863
Query: 363 GIVVDRSV-----------GFGIISACVNLGLS-------------------DKAHSILD 392
+ + F + + + G S D A+ +L
Sbjct: 864 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 923
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM G + Y + CK EA +LV + ++GL D Y L++A S
Sbjct: 924 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 983
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A + ++M KG TI+T +
Sbjct: 984 EMDKAQEILKEMLG------KGLQPTIVT------------------------------F 1007
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI-K 571
N +++ FC G LED ++ L M+ PN T+ SL+ Y + ++ ++
Sbjct: 1008 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 1067
Query: 572 RKISTDGQ------KGIKFEHNLVDA-FLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
R + DG+ KG N+ +A FL+ +KG F + V S +K F+ + K+
Sbjct: 1068 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS--VSVSTYSVLIKGFLKRKKF 1125
Query: 625 KQA 627
+A
Sbjct: 1126 LEA 1128
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 152/387 (39%), Gaps = 42/387 (10%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
+VFE+ L ++D +CN L + A V +GV N +S
Sbjct: 639 RVFEKMLNYGLVLSVD-------SCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 691
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI---- 314
+ + + G ++ L LM G++ ++ YS++++GY + G L+ + I
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751
Query: 315 ----------------LLC----LGGGNMEQSDFSKE-------TYCEVVKGFLQNGNVK 347
LLC L S+ ++ Y ++ GF + G+++
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
+ E + I D IIS +G +A + EM G +
Sbjct: 812 AASKFFYE---MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 868
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ YCK +A ++ + +G +V Y LI+ D SA L +M +
Sbjct: 869 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 928
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+ +Y +I+ GL ++ E + E E + T + +++ A+CK+G ++
Sbjct: 929 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE-FEAAGLNADTVTYTTLMDAYCKSGEMDK 987
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGY 554
A+ L+ M+ +P T+ L+NG+
Sbjct: 988 AQEILKEMLGKGLQPTIVTFNVLMNGF 1014
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/399 (19%), Positives = 164/399 (41%), Gaps = 51/399 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ A + G C + + +A K+ M G+ P+ +F L Y G +
Sbjct: 825 ITPDVLTYTAIISGFCQ-IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 883
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ + M + G S +V Y++LI G K G+L+SA+ +L + ++ + F TY
Sbjct: 884 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE-LLHEMWKIGLQPNIF---TYNS 939
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+V G ++GN++ L+ E E +G+ D ++ A G DKA IL EM
Sbjct: 940 IVNGLCKSGNIEEAVKLVGE---FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 996
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + + + +C + +L+ + + G+ + +++L++ + +
Sbjct: 997 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 1056
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+A ++++DM + +Y ++
Sbjct: 1057 AATAIYKDMCSRGVGPDGKTY------------------------------------ENL 1080
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
+ CKA +++A + M F + TY LI G++ +++ ++ +++R
Sbjct: 1081 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR--- 1137
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+G+ + + D F KG D ++ +++ E
Sbjct: 1138 ----EGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1172
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 150/375 (40%), Gaps = 42/375 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PNI ++ L G C+ + +S+A +++ M V G +PN +F L + L + V
Sbjct: 148 EPNIVTLSSLLNGYCHS-KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAV 206
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
L M G +V Y +++G K G+ + A ILL MEQ Y
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA--FILL----NKMEQGKLEPGVLIYT 260
Query: 335 EVVKGFLQNGNVKGLANLI--IEAQKLEPSGI------------------------VVDR 368
++ G +N ++ NL +E + + P+ + +++R
Sbjct: 261 TIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 369 SVG------FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
+ +I A V G +A + DEM + Y + +C R EA
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
Q+ + S DV +Y LI+ ++ LFR+M + + +Y T++ G
Sbjct: 381 KQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQG 440
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
L + ++ E+V D V +N+++ CK G+LE A + + EP
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 543 NDQTYLSLINGYVTA 557
TY +I G A
Sbjct: 500 TIYTYNIMIEGMCKA 514
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 192/460 (41%), Gaps = 79/460 (17%)
Query: 110 IAHLSSLQDNHNLKRAFASVVYVIEK------NPKLLDFQTVHTLLGSMRNANTAAPAFA 163
I LSSL + + + + V ++++ P + F +TL+ + N A+ A A
Sbjct: 151 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF---NTLIHGLFLHNKASEAVA 207
Query: 164 LVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYAC 223
L+ M +G + +C++ +AF+ + + +++ ++P +
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNK------MEQGK--LEPGVLIY 259
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN 283
++G C + + DA + + M G+RPN
Sbjct: 260 TTIIDGLCKN-KHMDDALNLFKEMETKGIRPN---------------------------- 290
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFL 341
+V YSSLIS G ASR + +M + + + T+ ++ F+
Sbjct: 291 -------VVTYSSLISCLCNYGRWSDASRLL------SDMIERKINPDVFTFSALIDAFV 337
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA-------CVNLGLSDKAHSILDEM 394
+ G ++EA+KL +V RS+ I++ C++ L D+A + + M
Sbjct: 338 KEGK-------LVEAEKLYDE--MVKRSIDPSIVTYSSLINGFCMHDRL-DEAKQMFEFM 387
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ C + Y +K +CK R E +L ++S GL + Y LI+ + D
Sbjct: 388 VSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDC 447
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A +F++M + +Y T++ GL +N + E A + E ++ ++E + +N
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE-KAMVVFEYLQRSKMEPTIYTYNI 506
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+I CKAG++ED + +P+ Y ++I+G+
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 140/333 (42%), Gaps = 16/333 (4%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
E M LG+ N ++ L + + + + M + G+ +V SSL++GY
Sbjct: 105 EQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKETYCEVVKG-FLQNGNVKGLANLIIEAQKLEPSG 363
+ A + G + T+ ++ G FL N + +A + ++ G
Sbjct: 165 KRISEAVALVDQMFVTGYQPNT----VTFNTLIHGLFLHNKASEAVALI----DRMVAKG 216
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
D +++ G +D A +L++M G+ +Y + CK +A
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDAL 276
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
L ++ + G++ +V Y +LI + A L DM E +I ++ ++
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 484 MENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
++ + DE+V+ DP + ++S+I+ FC RL++AK+ M+
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVT----YSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
P+ +Y +LI G+ A++ + ++ E+ ++
Sbjct: 393 FPDVVSYSTLIKGFCKAKRVDEGMELFREMSQR 425
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 193/485 (39%), Gaps = 39/485 (8%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQ 143
+EA + + + + LFP NS I+ L S R F + E +
Sbjct: 237 NEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNIT 296
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T + +L A LV+ M +N M E + +L+ + R K+ E
Sbjct: 297 TFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNG-------KLLE- 348
Query: 204 CCRIALDENLD-FMKPNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGF 261
++AL E +D ++PNIY+ N ++G C GL +SDA ++ M G+ P+ ++
Sbjct: 349 -AQLALKEMVDKGIEPNIYSFNTVMDGLCKNGL--ISDARMIMGLMISSGIGPDTVTYST 405
Query: 262 LAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
L + G K+++ ++++E G S + L+ K G + A + L
Sbjct: 406 LLHGCCSTG---KVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKL----L 458
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
N D T V+ G ++G + ++ G+ + S G +
Sbjct: 459 QKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIV--------EGMWIHGSAALGNLGNS 510
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
+GL D + N C L Y + CK R EA + +++ L D
Sbjct: 511 F-IGLVDSSS------NGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDS 563
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
YD I + SAF + +DM + +Y +++ GL ++ + LD+
Sbjct: 564 IIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDD 623
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+ E + +N++I C+ GR++DA L M+ PN ++ LI + A
Sbjct: 624 MKEKG-ITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKAS 682
Query: 559 QYFSV 563
+ V
Sbjct: 683 DFGVV 687
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 132/365 (36%), Gaps = 89/365 (24%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P Y N + G C DA +V + M V G RPNE SFG L Y GL +
Sbjct: 147 VSPETYTLNLLIAGLCDS-GRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRA 205
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+EL M FG V Y++LIS + + G E A R +
Sbjct: 206 LELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLV--------------------- 244
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+++ G+ D ISA + G +A I +M
Sbjct: 245 ---------------------ERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQ 283
Query: 396 ACGCSVGLGVYVPT-------LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
LG+ P L+ +CKE EA LV + +G +++ +Y+
Sbjct: 284 I---DEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIW---- 336
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ GL+ N + L E+V D +E
Sbjct: 337 -------------------------------LLGLVRNGKLLEAQLALKEMV-DKGIEPN 364
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+ +N+++ CK G + DA+ + MI P+ TY +L++G + + + H
Sbjct: 365 IYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILH 424
Query: 569 EIKRK 573
E+ R+
Sbjct: 425 EMMRR 429
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 175/424 (41%), Gaps = 48/424 (11%)
Query: 179 LWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVS 238
++ + CR+ N EE R+ D + P++ N+ + C +
Sbjct: 223 IYNTLISSFCREGRN--------EEAERLVERMREDGLFPDVVTFNSRISALCSA-GKIL 273
Query: 239 DAEKVIETMSV---LGV-RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
+A ++ M + LG+ RPN ++F + + +G+ E+ L M G ++ Y
Sbjct: 274 EASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESY 333
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNG---NVKGLAN 351
+ + G V+ G L A + + G +E + +S T V+ G +NG + + +
Sbjct: 334 NIWLLGLVRNGKLLEAQLALKEMVDKG-IEPNIYSFNT---VMDGLCKNGLISDARMIMG 389
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
L+I SGI D ++ C + G KA++IL EM GCS L
Sbjct: 390 LMIS------SGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLH 443
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM---REAR 468
+ KE R EA +L+ ++ LD + +I+ S A + M A
Sbjct: 444 SLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAA 503
Query: 469 IYDLKGSYLTIMTGLMENHR--PELM-----------AAFLDEVVED--PRVEVKTHD-- 511
+ +L S++ ++ + P+L+ A LDE + V H
Sbjct: 504 LGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDS 563
Query: 512 --WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+++ IH+FCK G++ A R L+ M + QTY SLI G + Q F + + +
Sbjct: 564 IIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDD 623
Query: 570 IKRK 573
+K K
Sbjct: 624 MKEK 627
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 146/373 (39%), Gaps = 45/373 (12%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ CN L D V E M LG+ P+ ++ L + +G ++K+
Sbjct: 1082 PDVKDCNRVLR-VLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAM 1140
Query: 278 LESLMNEFGFS--SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L M G V Y+ +I+G + G+LE A+ + G S TY
Sbjct: 1141 LLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELV-----EGMRLSKKASSFTYNP 1195
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G L G VK + +L +E +E GI+ +I + GL + A EM
Sbjct: 1196 LITGLLARGCVKKVYDLQLE---MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMR 1252
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A G + Y L YCK EA L D+ +GL V Y+ LI+ D +
Sbjct: 1253 AMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLE 1312
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTG-----------------LMENHRPELMA----- 493
A L +M E +Y +M G L + +P+ A
Sbjct: 1313 EARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRI 1372
Query: 494 -----------AF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
AF L EV+ + T +N +IH CK G L+DAK +M+ +
Sbjct: 1373 CAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQ 1432
Query: 542 PNDQTYLSLINGY 554
P+ TY LI+ +
Sbjct: 1433 PDCITYTCLIHAH 1445
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 146/352 (41%), Gaps = 28/352 (7%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQS--VSDAEKVIETMSVLGVRPNESSFGFLAYLYAL 268
EN M P + NA + G LQS V A+ M +G+ P+ ++ L Y
Sbjct: 1217 ENEGIM-PTVVTYNAMIHGL---LQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCK 1272
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
G ++ + L + G + ++ Y+ LI GY +LG+LE A R + +G EQ
Sbjct: 1273 AGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEA-RILKEEMG----EQGCL 1327
Query: 329 SKE-TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
TY ++KG L NV+ LA ++ G+ D I A + LG +A
Sbjct: 1328 PNVCTYTILMKGSL---NVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARA 1384
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ + + G S Y + CK +A +L M + S+GLQ D Y LI A
Sbjct: 1385 FELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHA 1444
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF------LDEVVE 501
+ A +F +M + ++ I+ R L +A+ L+E VE
Sbjct: 1445 HCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCR--RGNLYSAYGWFRKMLEEGVE 1502
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ +N +IHA C+ GR + A M+ N TY LI+G
Sbjct: 1503 PNEIT-----YNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDG 1549
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 12/194 (6%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV--MDISSSGLQLDVGNYD 442
D ++ +EM G + Y L ++ KE R + L+ M+ SG + Y+
Sbjct: 1101 DDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYN 1160
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT---IMTGLMENHRPELMAAF-LDE 498
+I D + A L MR ++ K S T ++TGL+ R + + L
Sbjct: 1161 VVITGLTRKGDLEEAAELVEGMRLSK----KASSFTYNPLITGLLA--RGCVKKVYDLQL 1214
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+E+ + +N++IH ++G +E A+ M + P+ TY SL+NGY A
Sbjct: 1215 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAG 1274
Query: 559 QYFSVLMMWHEIKR 572
L+++ +++R
Sbjct: 1275 NLKEALLLFGDLRR 1288
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 160/389 (41%), Gaps = 59/389 (15%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+PNE + + L +GL +K +E+ M G S + Y++LI+ Y + G E
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYE---- 193
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNG-NVKGLANLIIEAQKLEPSGIVVDRSVG 371
T L L E+ S TY V+ + G + +GL L E + GI D
Sbjct: 194 TSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAE---MRHEGIQPDIVTY 250
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
++SAC GL D+A + MN G L Y ++ + K R + L+ +++S
Sbjct: 251 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 310
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA-------------RIYDLKGSYLT 478
G D+ +Y+ L+EA S + A +F M+ A ++ G Y
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 479 IMTGLME----NHRP-------------------ELMAAFLDEVVEDPRVEVKTHDWNSI 515
+ +E N P E++ F D V E+ +++T++ I
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYE--GI 428
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW---HEIKR 572
I A K G EDA++ L+ M P+ + Y +I + A Y L+ + HE+
Sbjct: 429 IFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS 488
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGF 601
S I+ H+L LY+ +GG
Sbjct: 489 NPS------IETFHSL----LYSFARGGL 507
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 153/406 (37%), Gaps = 87/406 (21%)
Query: 193 NFVAFLKVFEECCRIALD-ENL---------DFMKPNIYACNAALEGCCYGLQSVSD-AE 241
+ + + V C R LD E L + ++P+I N L C ++ + D AE
Sbjct: 210 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA--IRGLGDEAE 267
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
V TM+ G+ P+ +++ L + EK+ +L M G + Y+ L+ Y
Sbjct: 268 MVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAY 327
Query: 302 VKLGNLESA-----------------SRTILLCLGGGNMEQSDFSK-------------- 330
K G+++ A + ++LL L G + D +
Sbjct: 328 AKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDA 387
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY +++ F + G K + L + + +EP D GII AC GL + A
Sbjct: 388 ATYNILIEVFGEGGYFKEVVTLFHDMVEENIEP-----DMETYEGIIFACGKGGLHEDAR 442
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
IL M A VP+ KAY +IEA
Sbjct: 443 KILQYMTANDI-------VPSSKAYT----------------------------GVIEAF 467
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ ++ A F M E ++ +++ + A L +V D +
Sbjct: 468 GQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV-DSGIPRN 526
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N+ I A+ + G+ E+A +T M + +P+++T ++++ Y
Sbjct: 527 RDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVY 572
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 161/389 (41%), Gaps = 59/389 (15%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+PNE + + L +GL +K +E+ M G S + Y++LI+ Y + G E
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYE---- 193
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNG-NVKGLANLIIEAQKLEPSGIVVDRSVG 371
T L L ++ S TY V+ + G + +GL L E + GI D
Sbjct: 194 TSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAE---MRHEGIQPDIVTY 250
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
++SAC GL D+A + MN G L Y ++ + K R + + L+ +++S
Sbjct: 251 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMAS 310
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA-------------RIYDLKGSYLT 478
G D+ +Y+ L+EA S + A +F M+ A ++ G Y
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 479 IMTGLME----NHRP-------------------ELMAAFLDEVVEDPRVEVKTHDWNSI 515
+ +E N P E++ F D V E+ +++T++ I
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYE--GI 428
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW---HEIKR 572
I A K G EDA++ L+ M P+ + Y +I + A Y L+ + HE+
Sbjct: 429 IFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS 488
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGF 601
S I+ H+L LY+ +GG
Sbjct: 489 NPS------IETYHSL----LYSFARGGL 507
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 158/408 (38%), Gaps = 63/408 (15%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + P+I N + C G + M G++P+ ++ L A++GL +
Sbjct: 205 DKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGD 264
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ + MN+ G + YS L+ + KL LE S + GG++ D + +Y
Sbjct: 265 EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSL--PDIT--SY 320
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+++ + ++G++K +A + +
Sbjct: 321 NVLLEAYAKSGSIK--------------------------------------EAMGVFHQ 342
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M A GC+ Y L + + R + QL +++ SS D Y+ LIE
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIM-----TGLMENHRPELMAAFLDEVVEDPRVEVK 508
F+ +LF DM E I +Y I+ GL E+ R L +++V +
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA--- 459
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+ +I AF +A E+A M + P+ +TY SL+ + +
Sbjct: 460 ---YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGG-------LVK 509
Query: 569 EIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQV---VEKSQ 613
E + +S GI + +A + A +GG F+ ++ +EKS+
Sbjct: 510 ESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 107/520 (20%), Positives = 192/520 (36%), Gaps = 108/520 (20%)
Query: 163 ALVKCMFKN-RYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALD-ENL------- 213
AL+ +N RY EL D + + + + + V C R LD E L
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKND--KISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 214 --DFMKPNIYACNAALEGCCYGLQSVSD-AEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
+ ++P+I N L C ++ + D AE V TM+ G+ P+ +++ L +
Sbjct: 239 RHEGIQPDIVTYNTLLSACA--IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLR 296
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-----------------SRT 313
EK+ +L S M G + Y+ L+ Y K G+++ A + +
Sbjct: 297 RLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYS 356
Query: 314 ILLCLGGGNMEQSDFSK--------------ETYCEVVKGFLQNGNVKGLANLIIE--AQ 357
+LL L G + D + TY +++ F + G K + L + +
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA--------------------- 396
+EP D GII AC GL + A IL M A
Sbjct: 417 NIEP-----DMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAA 471
Query: 397 --------------CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
G + + Y L ++ + E+ ++ + SG+ + ++
Sbjct: 472 LYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFN 531
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
A IEA F+ A + DM ++R + + +++ A +DE E
Sbjct: 532 AQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYS-------FARLVDECREQ 584
Query: 503 PRVEVKTHDWNSIIHAFC-------KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
E+K D I +C K R +D L M+ + Q +I G
Sbjct: 585 FE-EMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDY 643
Query: 556 TAEQYFSVLMMWHEIKRKISTDG-QKGIKFEHNLVDAFLY 594
+ + ++ + K++++G GI+F + L+DA +
Sbjct: 644 DDDSNWQIV---EYVLDKLNSEGCGLGIRFYNALLDALWW 680
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 106/494 (21%), Positives = 194/494 (39%), Gaps = 97/494 (19%)
Query: 163 ALVKCMFKNRYFMPFELWGGFL--VDICRKNSNFVAFLKVFEECCRIALDENLDFM---- 216
AL+ + K R F EL + + +C + + + +F C R LD L F+
Sbjct: 372 ALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMF--CRRGKLDTALSFLGEMI 429
Query: 217 ----KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
KP++Y N+ + G C +S AE ++ M + P ++ L Y KG
Sbjct: 430 DMGLKPSVYPYNSLINGHCK-FGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS--- 329
K + L M G + +++L+SG + G + A + E ++++
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLF--------TEMAEWNVKP 540
Query: 330 -KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
+ TY +++G+ + GN+ + E + GIV D +I G + +A
Sbjct: 541 NRVTYNVMIEGYCEEGNMSKAFEFLNE---MIEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+D ++ C + Y L +C+E + EA + D+ G+ LD+ Y LI+ S
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGS 657
Query: 449 ITSQDFQSAFSLFRDM-------------------------REA-RIYDL---------K 473
+ +D + L ++M +EA I+DL +
Sbjct: 658 LKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 474 GSYLTIMTGLME-----------------NHRPELM--AAFLD---EVVEDPRVEVKTHD 511
+Y ++ GL + N P + FLD + V D + V+ H+
Sbjct: 718 VTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHN 777
Query: 512 ------------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+N +I FC+ GR+E+A + RMI P+ TY ++I+
Sbjct: 778 AILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRND 837
Query: 560 YFSVLMMWHEIKRK 573
+ +W+ + K
Sbjct: 838 VKKAIELWNSMTEK 851
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 7/193 (3%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
GI D + G+I + L +A ++ +M A GC V + Y + CK+ + EA
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+ D++ L+ DV Y L+ Q+F+ + +M R + + +++ G
Sbjct: 282 VGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEG 341
Query: 483 LMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
L + + E + V E P + V +N++I + CK ++A+ RM +
Sbjct: 342 LRKRGKVEEALNLVKRVAEFGVSPNIFV----YNALIDSLCKGRNFDEAELLFDRMGKIG 397
Query: 540 FEPNDQTYLSLIN 552
PND TY LI+
Sbjct: 398 LCPNDVTYSILID 410
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 145/345 (42%), Gaps = 21/345 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ + G C +Q ++I+ M L P+E++ L +G E+
Sbjct: 293 LKPDVVTYCTLVCGLCK-VQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEA 351
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L + EFG S + Y++LI K N + A + +G + +D TY
Sbjct: 352 LNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAE-LLFDRMGKIGLCPNDV---TYSI 407
Query: 336 VVKGFLQNGNVKGLANLIIEA--QKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHS 389
++ F + G + + + E L+PS +++ FG ISA A S
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISA---------AES 458
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
++ EM + Y + YC + + +A +L +++ G+ + + L+
Sbjct: 459 LMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLF 518
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
+ + A LF +M E + + +Y ++ G E FL+E++E V T
Sbjct: 519 RAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVP-DT 577
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ + +IH C G+ +AK + + E N+ Y L++G+
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGF 622
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 1/159 (0%)
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
K + EA LV ++ G+ ++ Y+ALI++ ++F A LF M + +
Sbjct: 344 KRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDV 403
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+Y ++ + + +FL E++ D ++ + +NS+I+ CK G + A+ +
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMI-DMGLKPSVYPYNSLINGHCKFGDISAAESLMAE 462
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
MI + EP TY SL+ GY + + L ++HE+ K
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 118/312 (37%), Gaps = 47/312 (15%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI-VELESLMNEFGFSSQMVFYS 295
+ +A V + M + GV + +G L +LK K+ + L M++ G V Y+
Sbjct: 628 LEEALSVCQDMGLRGVDLDLVCYGVLID-GSLKHKDRKVFLGLLKEMHDRGLKPDDVIYT 686
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
S+I K G+ + A L + G + ++ TY V+ G + G V I
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVP----NEVTYTAVINGLCKAGFVNEAE---IL 739
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI-LDEMNACGCSVGLGVYVPTLKAYC 414
K+ P G V V +G + G+ D ++ L G Y ++ +C
Sbjct: 740 CSKMRP-GNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFC 798
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
++ R EA++L+ + G+ D Y +I D + A L+ M E I
Sbjct: 799 RQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGI----- 853
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
RP+ +A +N++IH C AG + A
Sbjct: 854 -------------RPDRVA------------------YNTLIHGCCVAGEMGKATELRNE 882
Query: 535 MIFLQFEPNDQT 546
M+ +PN +T
Sbjct: 883 MLRQGLKPNTET 894
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + D+M G + +Y +++ C+ + A ++++ + ++G +++ Y+ LI+
Sbjct: 211 AMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLID 270
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
Q A + +D+ + +Y T++ GL + E+ +DE++ R
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLR-LRFS 329
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+S++ K G++E+A ++R+ PN Y +LI+ +
Sbjct: 330 PSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNF 383
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 145/339 (42%), Gaps = 13/339 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++Y N + C+ L A V+ + LG++P+ ++F L ++G
Sbjct: 98 IPPDVYTLNILINSFCH-LNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDA 156
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ L M GF +V Y +LI+G K+GN +A R + +MEQ + + Y
Sbjct: 157 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLL------RSMEQGNCQPDVVVY 210
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ ++ V NL K+ GI D +I + NL ++L++
Sbjct: 211 TSIIDSLCKDRQVTEAFNLF---SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQ 267
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + ++ + A CKE + EA +V + G++ +V Y+AL++ +
Sbjct: 268 MINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSE 327
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A +F M SY T++ G + R + +E+ + + T +N
Sbjct: 328 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP-NTVTYN 386
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+++H C GRL+DA M+ P+ TY L++
Sbjct: 387 TLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLD 425
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 106/252 (42%), Gaps = 11/252 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+++A V++ M + GV PN ++ L + L+ ++ V++ M G++ ++ Y++
Sbjct: 293 ITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT 352
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLII 354
LI+GY K+ ++ A+ M Q + + TY ++ G G L + I
Sbjct: 353 LINGYCKIQRMDKATYLF------EEMCQKELIPNTVTYNTLMHGLCHVGR---LQDAIA 403
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
++ G + D + ++ D+A ++L + + +Y + C
Sbjct: 404 LFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMC 463
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+ A + ++SS GL+ +V Y +I A LF +M
Sbjct: 464 RAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGC 523
Query: 475 SYLTIMTGLMEN 486
+Y TI GL++N
Sbjct: 524 TYNTITQGLLQN 535
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 101/266 (37%), Gaps = 43/266 (16%)
Query: 216 MKPNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
++PN+ NA ++G C LQS + +A KV +TM G PN S+ L Y +K
Sbjct: 308 VEPNVVTYNALMDGHC--LQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK 365
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA------------------------ 310
L M + V Y++L+ G +G L+ A
Sbjct: 366 ATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLD 425
Query: 311 ----------SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
+ +L + G NM D + Y V+ G + G ++ ++ L
Sbjct: 426 YLCKKSHLDEAMALLKTIEGSNM---DPDIQIYTIVIDGMCRAGELEAARDIF---SNLS 479
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
G+ + +I+ GL D+A+ + EM+ GCS Y + +
Sbjct: 480 SKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEAL 539
Query: 421 EATQLVMDISSSGLQLDVGNYDALIE 446
A QL+ ++ + G DV L+E
Sbjct: 540 RAIQLLQEMLARGFSADVSTTTLLVE 565
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 194/456 (42%), Gaps = 27/456 (5%)
Query: 109 LIAHLSSLQDNHNLKRAFASVVY-VIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKC 167
L+ H+ S Q H L FA+ V+ ++ K +T LL S+ AN ++ +
Sbjct: 188 LLVHVYSTQFKH-LGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYD- 245
Query: 168 MFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFM--KPNIYACNA 225
F GG + D+ ++ AF K E I L ++ + PN+ N
Sbjct: 246 ---------FICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNN 296
Query: 226 ALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELESLMNE 284
+ G C + +A + E M V P+ ++ F+ L L+ + E L+ M+E
Sbjct: 297 IIHGLCKS-GRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKE-MSE 354
Query: 285 FGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNG 344
GF V Y++LI GY K+GN+ A + L G S T +++GF ++
Sbjct: 355 LGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNS----VTLNSLIQGFCKSD 410
Query: 345 NVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS-ACVNLGLSDKAHSILDEMNACGCSVGL 403
+ N++ +++ G+ +++ +I+ C+ H I EM
Sbjct: 411 QIGQAENVL---EEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFI-REMLLRNLRPND 466
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
G+ + CK + EA +L + G ++ +ALI + + Q L RD
Sbjct: 467 GLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRD 526
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M E + + +Y T+++G + + + +E+V+ ++ + +N ++H C A
Sbjct: 527 MLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKG-IQPDIYTFNLLLHGLCNAD 585
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
++++A R + PN TY +I+GY A +
Sbjct: 586 KIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANK 621
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 193/489 (39%), Gaps = 64/489 (13%)
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG 233
F+P E+ L+D K N LK+ ++ L + + PN N+ ++G C
Sbjct: 357 FVPNEVVYNTLIDGYCKMGNISEALKIRDD----MLSKGIS---PNSVTLNSLIQGFCKS 409
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALK------------------------ 269
Q + AE V+E M G+ N+ SF + LK
Sbjct: 410 DQ-IGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGL 468
Query: 270 -----------GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
G Q + VEL + GF +V ++LI G K GN++ + + L
Sbjct: 469 LTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDML 528
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
G + F + TY ++ G + G VK L +++ GI D ++
Sbjct: 529 ERGLV----FDRITYNTLISGCCKEGKVKEGFEL---KEEMVKKGIQPDIYTFNLLLHGL 581
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
N D+A + E G + Y + YCK ++ E L+ ++ S L+L+
Sbjct: 582 CNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNS 641
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
Y++LI A + + +AF L DM+ + +Y ++M GL + LDE
Sbjct: 642 VVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDE 701
Query: 499 VVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+ ++ P V + +II + K G++ L+ M PN TY +I+G
Sbjct: 702 MRKEGLLPNVVC----YTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDG-- 755
Query: 556 TAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEM 615
F L E + ++ +KGI + +AF L K G + +V ++
Sbjct: 756 -----FCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSG 810
Query: 616 KVFVDKWKY 624
V +D+ Y
Sbjct: 811 AVCLDEITY 819
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 118/285 (41%), Gaps = 33/285 (11%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+IY N L G C + +A ++ G PN ++G + Y K+
Sbjct: 567 IQPDIYTFNLLLHGLCNA-DKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCK---ANKV 622
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESA--------SRTILLCLGGGNME 324
E E+L+NE V Y+SLI Y GN+ +A SR +LL
Sbjct: 623 EEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLL-------- 674
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
S TY ++ G G V +L+ E +K G++ + II LG
Sbjct: 675 ----SCATYSSLMHGLCNIGLVDDAKHLLDEMRK---EGLLPNVVCYTTIIGGYSKLGQM 727
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
+K + +L EM++ Y + +CK +T EA +L+ +++ G+ D Y+A
Sbjct: 728 NKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAF 787
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+ AF + +M + + +Y T++ G H+P
Sbjct: 788 TNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGC---HQP 829
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 195/484 (40%), Gaps = 38/484 (7%)
Query: 95 TANSLFPSKPVTNSLIAHLS-SLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMR 153
T S FPS + L +H + S NH ++ + L+F G ++
Sbjct: 3 TTTSPFPSPALHIPLHSHCTKSTNINHEIQSH--------SNKTQFLNFMRNQCKSGKLK 54
Query: 154 NANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENL 213
+ + A F + M + F L GF+V K ++ + + +E + +L
Sbjct: 55 SIDEALNFFHTMAKMNPLPSVIDFTLLLGFIV----KMKHYTTAISLVKE-----MHSSL 105
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
+KP+ + N + C+ L+ V+ V+ TM LG+ P+ +F L +KG
Sbjct: 106 G-IKPDTFILNVVINSLCH-LKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVG 163
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-- 331
+ VEL + + G+ S + Y LI+G K+G A + ME+ +++
Sbjct: 164 RAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWL------RKMEERNWNPNVV 217
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
Y V+ G ++G V L +E + GI + +I N G +A S+L
Sbjct: 218 VYSTVMDGLCKDGLVSEALGLCLE---MSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLL 274
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
DEM G L + CKE + +A ++ + G DV Y++LI+
Sbjct: 275 DEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQ 334
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVK 508
A +F M +Y +++ G + LDE+++ P V
Sbjct: 335 NQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVT- 393
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
W ++I FC+ GR AK M PN QT +++G ++ L ++H
Sbjct: 394 ---WTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFH 450
Query: 569 EIKR 572
+++
Sbjct: 451 AMEK 454
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/381 (19%), Positives = 144/381 (37%), Gaps = 59/381 (15%)
Query: 191 NSNFVAFLKVFEECCR---------IALDENLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
N N V + V + C+ + L+ + +KPN+ ++G C +A
Sbjct: 213 NPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLC-NFGRWKEAG 271
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESL---MNEFGFSSQMVFYSSLI 298
+++ M +GV P+ S L + +G KI++ +S+ M G + Y+SLI
Sbjct: 272 SLLDEMMKMGVMPDLQSLNILVDVLCKEG---KIMQAKSVIGFMILVGEVPDVFTYNSLI 328
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
Y ++ A+R L + G + Y ++ G+ + N+
Sbjct: 329 DRYCLQNQMDEATRVFELMVSRGCLPDI----VAYTSLIHGWCKIKNI------------ 372
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+KA +LDEM G + + + + +C+ R
Sbjct: 373 --------------------------NKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGR 406
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
A +L +++ G ++ +++ SQ A SLF M ++ + DL +
Sbjct: 407 PLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNL-DLNIVIYS 465
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
I+ M + A L + +++ + + +I+ F K G L+ A+ L M
Sbjct: 466 IILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEEN 525
Query: 539 QFEPNDQTYLSLINGYVTAEQ 559
P+ TY + G V +
Sbjct: 526 GCMPDSCTYNVFVQGLVAERE 546
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 145/342 (42%), Gaps = 12/342 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ + + C V +A ++ M LGV PN ++ L Y G E
Sbjct: 190 PDVFMVSIMVNAFCKD-GKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKG 248
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCE 335
+ M+E G S +V Y+ LI GY K ++ A + + G E++ + Y
Sbjct: 249 VLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLR-----GMQEEAALVPDERAYGV 303
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ + G + L+ E +L G+ + + +I+ G +A ++ M
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRL---GLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 360
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
Y L YC+E T+EA L + G++ V Y+ L++ F
Sbjct: 361 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 420
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A ++ M + + + Y T++ GL + E + +++ + + +N++
Sbjct: 421 DALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI-TFNTM 479
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
I CK G++ +A+ +M L P+ TY +LI+GY A
Sbjct: 480 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKA 521
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/466 (20%), Positives = 174/466 (37%), Gaps = 81/466 (17%)
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG 233
+P E G L+D + +++ +E R+ L K N++ CN+ + G C
Sbjct: 294 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL-------KTNLFICNSLINGYC-K 345
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
+ +AE VI M ++P+ S+ L Y +G + L M + G ++
Sbjct: 346 RGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLT 405
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y++L+ G ++G + A + L + G + Y ++ G + N +G + L
Sbjct: 406 YNTLLKGLCRVGAFDDALQIWHLMMKRGVAPD----EVGYSTLLDGLFKMENFEGASTL- 460
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ + G R +IS +G +A I D+M GCS Y + Y
Sbjct: 461 --WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 518
Query: 414 C-----------------------------------KEHRTAEATQLVMDISSSGLQLDV 438
C K R E T L+ ++ GL ++
Sbjct: 519 CKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNI 578
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL--------------- 483
Y ALI+ AFS + +M E + T+++GL
Sbjct: 579 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 638
Query: 484 MENH----------RPELMAAFLDEVVEDPRVEVKTH------DWNSIIHAFCKAGRLED 527
M +H + ++ A + ++ + KT +N I CK G+++D
Sbjct: 639 MVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 698
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
A+R + F P++ TY +LI+GY A + E+ R+
Sbjct: 699 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 744
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 80/173 (46%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G + AH + +M G + + + A+CK+ + EA V + + G++ ++ Y
Sbjct: 171 GETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTY 230
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+LI ++ D ++A + + M E + +Y ++ G + + + L + E
Sbjct: 231 HSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQE 290
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ + + +I +C+ G+++DA R L M+ L + N SLINGY
Sbjct: 291 EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 343
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
Q++ GIV D + +++A G D+A + +M G + Y + Y
Sbjct: 181 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 240
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE-ARIYDLKGS 475
A ++ +S G+ +V Y LI+ A + R M+E A + + +
Sbjct: 241 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 300
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW--NSIIHAFCKAGRLEDAKRTLR 533
Y ++ G + + LDE++ R+ +KT+ + NS+I+ +CK G + +A+ +
Sbjct: 301 YGVLIDGYCRTGKIDDAVRLLDEML---RLGLKTNLFICNSLINGYCKRGEIHEAEGVIT 357
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
RM+ +P+ +Y +L++GY + ++ Q+GI+ + L
Sbjct: 358 RMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML-------QEGIEPTVLTYNTLL 410
Query: 594 YALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
L + G FD +Q+ + V D+ Y
Sbjct: 411 KGLCRVGAFDDALQIWHLMMKRGVAPDEVGY 441
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 171/434 (39%), Gaps = 81/434 (18%)
Query: 188 CRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETM 247
CR+ AF C L E ++ P + N L+G C + + DA ++ M
Sbjct: 379 CREGHTSEAF-----NLCDKMLQEGIE---PTVLTYNTLLKGLCR-VGAFDDALQIWHLM 429
Query: 248 SVLGVRPNESSF--------------------------GF----LAYLYALKGLQE--KI 275
GV P+E + GF + + + GL + K+
Sbjct: 430 MKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKM 489
Query: 276 VELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK-- 330
VE E + M + G S + Y +LI GY K N+ A + G ME+ S
Sbjct: 490 VEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV------KGAMEREPISPSI 543
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFG-IISACVNLGLSDKA 387
E Y ++ G ++ + + +L+ E + L P+ V +G +I G+ DKA
Sbjct: 544 EMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPN------IVTYGALIDGWCKEGMLDKA 597
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG--------LQLDVG 439
S EM G S + + + + R EA L+ + G L+ D+
Sbjct: 598 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI- 656
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y A+ + + + + F L ++ +Y++ + L TG +++ R L
Sbjct: 657 RYAAIQKIADSLDESCKTFLLPNNI----VYNIAIAGLC-KTGKVDDARRFFSMLSLKGF 711
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
V D + ++IH + AG +++A R M+ PN TY +LING +E
Sbjct: 712 VPD------NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 765
Query: 560 YFSVLMMWHEIKRK 573
++H++ +K
Sbjct: 766 VDRAQRLFHKLHQK 779
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 135/335 (40%), Gaps = 51/335 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+I N+ + G + + + + ++ M + G+ PN ++G L + +G+ +K
Sbjct: 539 ISPSIEMYNSLISGL-FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 597
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
M E G S+ ++ S+++SG +LG ++ A+ + M F + C
Sbjct: 598 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM------QKMVDHGFFPDHEC- 650
Query: 336 VVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+K ++ ++ +A+ + E+ K L P+ IV + + I+ G D A
Sbjct: 651 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIA-----IAGLCKTGKVDDARRFFSM 705
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
++ G Y + Y EA +L ++ GL ++ Y+ALI S++
Sbjct: 706 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 765
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A LF + + KG + ++T +N
Sbjct: 766 VDRAQRLFHKLHQ------KGLFPNVVT------------------------------YN 789
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
++I +CK G ++ A + +MI P+ Q L
Sbjct: 790 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQCNL 824
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 37/139 (26%)
Query: 208 ALDENLD-FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
+LDE+ F+ PN N A+ G C V DA + +S+ G P+ ++ L + Y
Sbjct: 667 SLDESCKTFLLPNNIVYNIAIAGLC-KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 725
Query: 267 AL----------------KGLQEKIVELESLMNEF-------------------GFSSQM 291
+ +GL IV +L+N G +
Sbjct: 726 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 785
Query: 292 VFYSSLISGYVKLGNLESA 310
V Y++LI GY K+GN+++A
Sbjct: 786 VTYNTLIDGYCKIGNMDAA 804
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 164/390 (42%), Gaps = 28/390 (7%)
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
E +I+ + V+ + +A LK Q + L GF+ YS+L+S
Sbjct: 621 ELLIDCLHAFEVKDSAMHVAIIASYGKLKLWQNAEIVFRDL-QRHGFAGNTSAYSALLSA 679
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE--VVKGFLQNGNVKGLANLIIEAQK 358
Y + GN E A+R + NM + C V++ F + G K L+ Q+
Sbjct: 680 YAETGNFERATRAL------DNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFY---QR 730
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
L GI + I A G ++A S+ +M G S + V+ L Y +E
Sbjct: 731 LPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETV 790
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
+A +LV DI +GL+LD+ Y+ +I ++ A +F+ M+E ++ T
Sbjct: 791 EIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNT 850
Query: 479 IMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
++ N + A L E+++ P + + ++I A+ + EDA+ + +
Sbjct: 851 LIMLYSRNQMVQEAQALLREMIKTGNAPNIST----YTTLISAYGRLQAYEDAELVFKSI 906
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG-QKGIKFEHNLVDAFLY 594
+P+ Y +IN Y A ++ + E+ ++ DG + + H L+D++
Sbjct: 907 AETGCKPDATAYNVMINVYRKAGEHRKI----EEVIEQMKADGFEPSLTTIHMLMDSY-- 960
Query: 595 ALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KGG +V+E E+ + D Y
Sbjct: 961 --GKGGATGKAEEVLETLPEIGMSPDAIHY 988
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 139/336 (41%), Gaps = 28/336 (8%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A + ++ M G++PN + ++ + G +++ E + E G + + +
Sbjct: 689 ATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFH 748
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
+ + GNLE A R++ M ++ FS +V K L + + I+A++L
Sbjct: 749 AFSRNGNLEEA-RSMYR-----QMREAGFSPSI--QVFKALLA---LYSRETVEIDAEEL 797
Query: 360 ----EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
+ +G+ +D + +IS LG KA + M GCS + + Y +
Sbjct: 798 VKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSR 857
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
EA L+ ++ +G ++ Y LI A Q ++ A +F+ + E +
Sbjct: 858 NQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATA 917
Query: 476 YLTIMTGLMEN---HRPELMAAFLDEVVEDPRV---EVKTHDWNSIIHAFCKAGRLEDAK 529
Y +M + HR ++EV+E + E + ++ ++ K G A+
Sbjct: 918 Y-NVMINVYRKAGEHRK------IEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAE 970
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
L + + P+ Y S+IN ++ + Y S ++
Sbjct: 971 EVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVI 1006
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE-HRTAEATQLVMDISSS 432
++S G + +L M GC L + +KA + + A+ L+ D+ ++
Sbjct: 120 LMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAA 179
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GL+ D Y+ LI A + A +F +M+ +Y +++ R E
Sbjct: 180 GLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAA 239
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++ ++++ +NS++HAF + GR+E+ +R M + ++ TY ++I+
Sbjct: 240 SSIF-RIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIH 298
Query: 553 GYVTA 557
Y A
Sbjct: 299 MYGKA 303
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 136/346 (39%), Gaps = 43/346 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+ N + C +SDA + E M G P+ ++ + +Y G E
Sbjct: 181 LRPDTITYNTLISACSLN-NRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAA 239
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ +M E GF+ V Y+S++ + + G +E R G M + S + TY
Sbjct: 240 SSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERI------RGMMRDARCSSDEITY 293
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNLGLSDKAHSILD 392
++ + + G + L ++ ++ G D SV F + I G ++A ++ +
Sbjct: 294 NTMIHMYGKAGMHRKAEELYVQ---MKEEGRCPD-SVTFTVLIDTLGKAGFVNEAAAMFE 349
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M L + + AY K ++A + +G++ D+ Y +++ ++
Sbjct: 350 DMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAE 409
Query: 453 DFQSAFSLFRDM------REARIYDLKGSYLTIMTGL--MENHRPELM------------ 492
+ L++ M E +Y + + L +EN E++
Sbjct: 410 MPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSLAEIENLSKEMVQSSASLAALSST 469
Query: 493 ---------AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
AA + ++ V VK N ++ AF +G+L DA+
Sbjct: 470 LAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDAR 515
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 105/241 (43%), Gaps = 10/241 (4%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
DAE++++ + G+ + + + LY+ G K + M E G S +++LI
Sbjct: 793 DAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLI 852
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
Y + ++ A + + GN + TY ++ + G ++ + + +
Sbjct: 853 MLYSRNQMVQEAQALLREMIKTGNAP----NISTYTTLISAY---GRLQAYEDAELVFKS 905
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+ +G D + +I+ G K ++++M A G L + +Y K
Sbjct: 906 IAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGA 965
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
T +A +++ + G+ D +Y ++I + + ++D+ SA R M +A + + +++T
Sbjct: 966 TGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACV---RPTHVT 1022
Query: 479 I 479
I
Sbjct: 1023 I 1023
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 71/398 (17%), Positives = 157/398 (39%), Gaps = 62/398 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSV-SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
++P + A +A + C Y + SDAE M GVRP+ ++ + ++ + EK
Sbjct: 356 VRPTLQAFSAMI--CAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEK 413
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVK---LGNLESASRTILLCL------------G 319
+ L M G ++ Y+ ++ + + L +E+ S+ ++ G
Sbjct: 414 CIILYKAMVGSGLKPELSVYAIMVRVFYQKSSLAEIENLSKEMVQSSASLAALSSTLAKG 473
Query: 320 GGNMEQSDFSK-----------ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS------ 362
G E + K ET +V+ F +G + +L+ +EPS
Sbjct: 474 GFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVHAVSSIEPSVAAHLY 533
Query: 363 ---GIVVDRSVGFG-----------------------IISACVNLGLSDKAHSILDEMNA 396
+++ ++ F ++++ G+ D+A + +M
Sbjct: 534 KRLALMLAKAGRFSEAEEEMRTSQTYGQAQVSDFLKVLVASYDRAGMQDEALARFLDMTT 593
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + V + YC++ A +L++D + D + A+I + + +Q+
Sbjct: 594 EGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFEVKDSAMHVAIIASYGKLKLWQN 653
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A +FRD++ +Y +++ E E LD +V ++ N ++
Sbjct: 654 AEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVA-AGLQPNAACANYVL 712
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
AF +AG+ ++ +R+ + PN +T++ + + +
Sbjct: 713 EAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAF 750
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 171/425 (40%), Gaps = 62/425 (14%)
Query: 177 FELWGGFLVDICRKNSNFVAFLKVFEE-CCRIALDENLD-FMK-------PNIYACNAAL 227
F+++ + CR+N VA+ + C +DE +D F+K P + +
Sbjct: 273 FKVFNEMPLKGCRRNE--VAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 228 EGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGF 287
+ C G + S+A +++ M G++PN ++ L + EK EL M E G
Sbjct: 331 KSLC-GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK--ETYCEVVKGFLQNGN 345
++ Y++LI+GY K G +E A + L ME S TY E++KG+ ++
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVEL------MESRKLSPNTRTYNELIKGYCKSNV 443
Query: 346 VK--GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
K G+ N ++E +K+ P + + +I G D A+ +L MN G
Sbjct: 444 HKAMGVLNKMLE-RKVLPDVVTYN-----SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y + + CK R EA L + G+ +V Y ALI+ + A +
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKT----------- 509
M ++ ++ GL + + + +++V+ P V T
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 510 --------------------HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
H + + I +C+ GRL DA+ + +M P+ TY S
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 550 LINGY 554
LI GY
Sbjct: 678 LIKGY 682
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 150/357 (42%), Gaps = 55/357 (15%)
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
GL +++ ++ M E + Y+ +++GY KLGN+E A++ + + G DF
Sbjct: 197 GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG--LDPDFF 254
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG--IISACVNLGLSDKA 387
TY ++ G+ Q ++ + E P V + I CV + D+A
Sbjct: 255 --TYTSLIMGYCQRKDLDSAFKVFNEM----PLKGCRRNEVAYTHLIHGLCVARRI-DEA 307
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ +M C + Y +K+ C R +EA LV ++ +G++ ++ Y LI++
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ F+ A L M E GLM N
Sbjct: 368 LCSQCKFEKARELLGQMLEK--------------GLMPN--------------------- 392
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N++I+ +CK G +EDA + M + PN +TY LI GY + + ++ ++
Sbjct: 393 -VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLN 451
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
++RK+ D + ++L+D + G FD+ +++ + + D+W Y
Sbjct: 452 KMLERKVLPD----VVTYNSLID----GQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 170/418 (40%), Gaps = 42/418 (10%)
Query: 216 MKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+ PN+ NA + G C G+ + DA V+E M + PN ++ L Y + +
Sbjct: 389 LMPNVITYNALINGYCKRGM--IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKA 446
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+ L ++ E +V Y+SLI G + GN +SA R + L G + + TY
Sbjct: 447 MGVLNKML-ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD----QWTYT 501
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ ++ V+ +L LE G+ + + +I G D+AH +L++M
Sbjct: 502 SMIDSLCKSKRVEEACDLF---DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ C + + C + + EAT L + GLQ V LI + DF
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR---PELMAAFLDEVVEDPRVEVKTHD 511
A+S F+ M + +Y T + R E M A + E P +
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL----FT 674
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
++S+I + G+ A L+RM EP+ T+LSLI H ++
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK---------------HLLE 719
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFM 629
K QKG + E L A+ FD V++++EK E V + Y++ +
Sbjct: 720 MKYGK--QKGSEPE-------LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 141/335 (42%), Gaps = 25/335 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N+ ++G C + A +++ M+ G+ P++ ++ + E+ +
Sbjct: 460 PDVVTYNSLIDGQCRS-GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L + + G + +V Y++LI GY K G ++ A + L + S T+ ++
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS----LTFNALI 574
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G +G +K A L+ E K+ G+ S +I + G D A+S +M +
Sbjct: 575 HGLCADGKLKE-ATLLEE--KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS 631
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G Y ++ YC+E R +A ++ + +G+ D+ Y +LI+ A
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLME-------NHRPELMAAF----LDEVVE----- 501
F + + MR+ + ++L+++ L+E PEL A D VVE
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751
Query: 502 -DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
+ V + +I C+ G L A++ M
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 189/458 (41%), Gaps = 44/458 (9%)
Query: 177 FELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQS 236
FEL ++ N +A + +E ++ ++ D + PNIY N + G C L +
Sbjct: 175 FELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYC-KLGN 233
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V +A + + + G+ P+ ++ L Y + + ++ + M G V Y+
Sbjct: 234 VEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH 293
Query: 297 LISG-------------YVKLGNLES----ASRTIL---LCLGGGNMEQSDFSKE----- 331
LI G +VK+ + E + T+L LC E + KE
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Query: 332 ------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
TY ++ + L+ Q LE G++ + +I+ G+ +
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELL--GQMLE-KGLMPNVITYNALINGYCKRGMIE 410
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
A +++ M + S Y +K YCK + +A ++ + + DV Y++LI
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ S +F SA+ L M + + + +Y +++ L ++ R E D + E V
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL-EQKGV 528
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
+ ++I +CKAG++++A L +M+ PN T+ +LI+G + A+
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG-LCADGKLKEAT 587
Query: 566 MWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFD 603
+ E KI G++ + ++ L+K G FD
Sbjct: 588 LLEEKMVKI------GLQPTVSTDTILIHRLLKDGDFD 619
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 118/324 (36%), Gaps = 56/324 (17%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++++ GL D+ + EM + Y + YCK EA Q V I +G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELM 492
L D Y +LI +D SAF +F +M + +Y ++ GL R E M
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 493 AAFL----DEV-----------------------------VEDPRVEVKTHDWNSIIHAF 519
F+ DE +E+ ++ H + +I +
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV---TAEQYFSVLMMWHEIKRKIST 576
C + E A+ L +M+ PN TY +LINGY E V+ + RK+S
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES--RKLSP 426
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLK 636
+ + + L+ + + V M V+ K E KV D Y L
Sbjct: 427 N----TRTYNELIKGYCKSNVH-----KAMGVLNKMLERKVLPDVVTYNS--------LI 469
Query: 637 VAKLRKRNFKKMEALIAFKNWAGL 660
+ R NF L++ N GL
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGL 493
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 164/377 (43%), Gaps = 57/377 (15%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ N + G C + +A K+++ M + G + ++G+L + G ++
Sbjct: 272 EPDVQTFNDVIHGLCRA-GRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMG---QVD 327
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC-- 334
E +L+N+ + V Y++LISGYV G E A + NM + + + Y
Sbjct: 328 EARALLNKIP-NPNTVLYNTLISGYVASGRFEEAKDLLY-----NNMVIAGYEPDAYTFN 381
Query: 335 EVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ G ++ G + L+ E A++ EP+ V+ ++ +I+ G ++A I++
Sbjct: 382 IMIDGLVKKGYLVSALELLNEMVAKRFEPN--VITYTI---LINGFCKQGRLEEAAEIVN 436
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M+A G S+ Y + A CK+ EA QL ++S G + D+ +++LI +
Sbjct: 437 SMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNH 496
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF------------LDEVV 500
+ A SL+ DM + +Y T++ + R + AF LD +
Sbjct: 497 KMEEALSLYHDMFLEGVIANTVTYNTLVHAFL--MRDSIQQAFKLVDEMLFRGCPLDNIT 554
Query: 501 EDPRVEV--KTH----------------------DWNSIIHAFCKAGRLEDAKRTLRRMI 536
+ ++ KT N +I C+ G++ DA + L+ MI
Sbjct: 555 YNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMI 614
Query: 537 FLQFEPNDQTYLSLING 553
P+ TY SLING
Sbjct: 615 HRGLTPDIVTYNSLING 631
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 94/478 (19%), Positives = 180/478 (37%), Gaps = 92/478 (19%)
Query: 124 RAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCM-FKNRYFMP------ 176
F + +I+K + DF+ + LL M++ + M + +P
Sbjct: 97 HTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRL 156
Query: 177 -FELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMK----PNIYACNAALEGCC 231
++WG + D K+ N V + V +C R+A + D + P +Y ++ C
Sbjct: 157 LLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALC 216
Query: 232 -----------------YGL-----------------QSVSDAEKVIETMSVLGVRPNES 257
+G VS+A +++E M ++ P+
Sbjct: 217 MVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQ 276
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
+F + + G + +L M GFS+ + Y L+ G ++G ++ A R +L
Sbjct: 277 TFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEA-RALLNK 335
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
+ N Y ++ G++ +G + +L+ + +G D +I
Sbjct: 336 IPNPN-------TVLYNTLISGYVASGRFEEAKDLLYNNMVI--AGYEPDAYTFNIMIDG 386
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
V G A +L+EM A + Y + +CK+ R EA ++V +S+ GL L+
Sbjct: 387 LVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLN 446
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
Y+ LI A + + A LF +M KG +P++
Sbjct: 447 TVGYNCLICALCKDGNIEEALQLFGEMSG------KGC------------KPDI------ 482
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+ +NS+I+ CK ++E+A M N TY +L++ ++
Sbjct: 483 ------------YTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFL 528
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 18/218 (8%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D A S+L +M GC +Y + A C+ +R +EA QL+ D+ + DV ++ +
Sbjct: 222 DSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDV 281
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I + A L M +Y +M GL + + A L+++ +P
Sbjct: 282 IHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI-PNPN 340
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTL-RRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+ +N++I + +GR E+AK L M+ +EP+ T+ +I+G V S
Sbjct: 341 TVL----YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSA 396
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
L + +E+ K +FE N++ Y ++ GF
Sbjct: 397 LELLNEMVAK---------RFEPNVIT---YTILINGF 422
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 15/339 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+ Y N ++G VS A +++ M PN ++ L + +G E+
Sbjct: 374 EPDAYTFNIMIDGLVKKGYLVS-ALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAA 432
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC-- 334
E+ + M+ G S V Y+ LI K GN+E A + G M + Y
Sbjct: 433 EIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLF------GEMSGKGCKPDIYTFN 486
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G +N ++ +L + G++ + ++ A + +A ++DEM
Sbjct: 487 SLINGLCKNHKMEEALSLY---HDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEM 543
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
GC + Y +KA CK + L ++ G+ + + + LI +
Sbjct: 544 LFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKV 603
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLME-NHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A +DM + +Y +++ GL + H E F E R + T +N
Sbjct: 604 NDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAIT--YN 661
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++I C G DA L + + F PN+ T+ LIN
Sbjct: 662 TLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 165/408 (40%), Gaps = 48/408 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP++ N + G C + ++A +I+ M G +PN ++G + + G +
Sbjct: 190 KPDLITINTLVNGLCLSGKE-AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-----------------SRTILL--- 316
EL M E V YS +I G K G+L++A + IL+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 317 CLGG----GNMEQSDFSKE-------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPS--- 362
C G G D K T+ ++ F++ G ++ EA++L
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR-------EAEELHKEMIH 361
Query: 363 -GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
GI D +I DKA+ ++D M + GC + + + YCK +R +
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
+L +S G+ D Y+ LI+ A LF++M ++ +Y ++
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
GL +N E A + E +E ++E+ +N IIH C A +++DA + +
Sbjct: 482 GLCDNGESE-KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
P +TY +I G +++ RK+ DG + +N++
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLF----RKMEEDGHAPDGWTYNIL 584
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 156/388 (40%), Gaps = 41/388 (10%)
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
LG PN +F L L+G + +EL M E G ++ ++L++G
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNG--------- 202
Query: 310 ASRTILLCLGGGNMEQS---DFSKETYCE---VVKGFLQNGNVK-GLANLIIE-AQKLEP 361
LCL G E D E C+ V G + N K G L +E +K+E
Sbjct: 203 ------LCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
I +D II G D A ++ +EM G + + Y + +C R +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 316
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
+L+ D+ + +V + LI++ + + A L ++M I +Y +++
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376
Query: 482 GLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
G + + + +D +V DP + +N +I+ +CKA R++D R+M
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRT----FNILINGYCKANRIDDGLELFRKMSLR 432
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV--DAFLYAL 596
+ TY +LI G+ + ++ E+ + K N+V L L
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR---------KVPPNIVTYKILLDGL 483
Query: 597 VKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
G + +++ EK ++ K+ +D Y
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIY 511
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 175/400 (43%), Gaps = 24/400 (6%)
Query: 227 LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG 286
+ G C GL V +A ++++ M G P ++GFL L+GL ++ + + G
Sbjct: 252 VRGMC-GLGRVREAARLVDRMMTKGCMPGVMTYGFL-----LQGLC-RVRQADEARAMLG 304
Query: 287 FSSQM--VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNG 344
++ V ++++I G + G L A+ + +G ++ TY ++ G + G
Sbjct: 305 RVPELNVVLFNTVIGGCLAEGKLAEATE-LYETMG---LKGCQPDAHTYSILMHGLCKLG 360
Query: 345 NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
+ L+ E +K + VV ++ S C N G+ D ++L+EM+A G ++
Sbjct: 361 RISSAVRLLREMEKKGFAPNVVTYTIVLH--SFCKN-GMWDDTRALLEEMSAKGLTLNSQ 417
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y + A CK+ R EA L+ ++ S G D+ +Y+ +I ++ + A +F ++
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
E + +Y TI+ L+ + R + E++ + +N +I A CK G
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILH-GCSLDVVSYNGLIKAMCKDGN 536
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF 584
++ + L M +PN+ +Y LI+ + L E+ +++ G
Sbjct: 537 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL----ELSKQMLNQGLAPDIV 592
Query: 585 EHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+N + L K G+ A + ++EK V D Y
Sbjct: 593 TYN---TLINGLCKMGWMHAALNLLEKLHNENVHPDIITY 629
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 17/255 (6%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G V D + +I A + G +A ++L+EM GC+ + + ++ C R EA
Sbjct: 205 GCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREA 264
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+LV + + G V Y L++ + A ++ + E + + T++ G
Sbjct: 265 ARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV----LFNTVIGG 320
Query: 483 -LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
L E E A L E + + H ++ ++H CK GR+ A R LR M F
Sbjct: 321 CLAEGKLAE--ATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFA 378
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
PN TY +++ + MW + + + KG+ + +YAL K G
Sbjct: 379 PNVVTYTIVLHSFCKNG-------MWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR 431
Query: 602 FDAVMQVVEKSQEMK 616
D M ++ QEM+
Sbjct: 432 MDEAMGLI---QEMR 443
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 157/384 (40%), Gaps = 48/384 (12%)
Query: 210 DENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL 268
DE LD + PN N ++G C + + +A + E M V V P +F L
Sbjct: 241 DEMLDRRVAPNRITYNTLIDGYC-KVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCR 299
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL-------ESASR--------- 312
+ E+ + M +GF Y++L G++K GN+ E A R
Sbjct: 300 AQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYT 359
Query: 313 -TILL--CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRS 369
+ILL GNME+++ EV+K FL+NG L P G+ +
Sbjct: 360 CSILLNALCKEGNMEKAE-------EVLKKFLENG--------------LAPVGVFFNT- 397
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
I++ +G +KA++ +++M A G Y +K +C+ EA + + +
Sbjct: 398 ----IVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKM 453
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
G+ +V Y+ LI+ S F F + +M + + SY ++ L ++
Sbjct: 454 VEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANI 513
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
L ++V V +N +I C AG+L+DA R M+ + P TY
Sbjct: 514 LEAEVILGDMVHRGVVP-NAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNI 572
Query: 550 LINGYVTAEQYFSVLMMWHEIKRK 573
LING + + EI RK
Sbjct: 573 LINGLCKKGKVMEAENLASEITRK 596
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 172/415 (41%), Gaps = 35/415 (8%)
Query: 81 TNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLL 140
+ ++A+ + + + A L P+ NSL+ ++ N++ A + ++EK L
Sbjct: 405 VGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMK---NMEEAEKCIKKMVEKGV-LP 460
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
+ +T +TL+ + F +++ M K + P + G L++ K++N +
Sbjct: 461 NVETYNTLIDGYGRSCLFDRCFQILEEMEK-KGLKPNVISYGCLINCLCKDANIL----- 514
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
E I D + PN N ++G C + DA + + M + P ++
Sbjct: 515 --EAEVILGDMVHRGVVPNAQIYNMLIDGSCIA-GKLKDAFRFFDEMVAREIVPTLVTYN 571
Query: 261 FLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
L KG K++E E+L +E G S ++ Y+SLISGY GN++ A
Sbjct: 572 ILINGLCKKG---KVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELY--- 625
Query: 318 LGGGNMEQSDFSK--ETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFG 373
M++S TY ++ G + G V ++E Q++ +V DR +
Sbjct: 626 ---ETMKKSGIKPTLNTYHRLIAGCGKEGLV------LVEKIYQEMLQMNLVPDRVIYNA 676
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I V G KA S+ M A G Y + + KE R + LV D+ G
Sbjct: 677 LIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRG 736
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
L YD LI +DF A+ +R+M E ++TGL E R
Sbjct: 737 LIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGR 791
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 149/365 (40%), Gaps = 63/365 (17%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN N+ ++ C ++++ +AEK I+ M GV PN ++ L Y L ++
Sbjct: 423 LRPNHVTYNSLVKKFCE-MKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRC 481
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++ M + G ++ Y LI+ K N+ A + G+M
Sbjct: 482 FQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVIL------GDM------------ 523
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V +G + N + N++I+ +C+ L D A DEM
Sbjct: 524 VHRGVVPNAQI---YNMLIDG--------------------SCIAGKLKD-AFRFFDEMV 559
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A L Y + CK+ + EA L +I+ GL DV Y++LI ++ + Q
Sbjct: 560 AREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQ 619
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTG-------LMENHRPELMAAFL--DEVVEDPRVE 506
A L+ M+++ I +Y ++ G L+E E++ L D V+
Sbjct: 620 KALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVI------ 673
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+N++IH + + G ++ A M +P+ TY LI G+ + V +
Sbjct: 674 -----YNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNL 728
Query: 567 WHEIK 571
+++K
Sbjct: 729 VNDMK 733
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 131/358 (36%), Gaps = 83/358 (23%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P ++ N + G C + + DAEK+ + M V PN ++ L Y G E+
Sbjct: 215 PGVFVYNVVIGGLCKE-KRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFN 273
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M ++ ++SL++G + +E A R + ME F + TY
Sbjct: 274 IRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVL------EEMEVYGFVPDRFTYTT 327
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ G L+ GNV L EA + K ILD
Sbjct: 328 LFDGHLKCGNVDASITLSEEAVR---------------------------KGVQILDYT- 359
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
CS+ L A CKE +A +++ +GL ++ ++ D
Sbjct: 360 ---CSI-------LLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDIN 409
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A++ M GL NH +NS+
Sbjct: 410 KAYTTIEKMEAV--------------GLRPNHVT----------------------YNSL 433
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ FC+ +E+A++ +++M+ PN +TY +LI+GY + + + E+++K
Sbjct: 434 VKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKK 491
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 154/347 (44%), Gaps = 17/347 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P++ N + G C + DA K+ + M+ G+ P+ S+ L Y G +
Sbjct: 221 VRPSLVTFNTVVNGLCKA-GRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEA 279
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ + + M + G +V ++SLI + GNLE A + G M + T+
Sbjct: 280 LAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALV------GQMRERGLRMNEFTF 333
Query: 334 CEVVKGFLQNGNVKG--LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ GF +NG + LA + +++PS VV +V +I+ LG D+A ++
Sbjct: 334 TALIDGFCRNGFLDDALLAMKEMRECRIQPS--VVCYNV---LINGYCKLGRMDEARELI 388
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
EM A G + Y L YCK T A +L + G+ D Y +LI
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEE 448
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ A LF M + + + +Y T++ G + + + DE+++ V
Sbjct: 449 RRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKG-VLPDVVT 507
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
++ +I K+ R ++A+R L ++ + P++ Y +L++ TAE
Sbjct: 508 YSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAE 554
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 142/377 (37%), Gaps = 47/377 (12%)
Query: 214 DFMKPNIYACNAALEGCCYGLQ-----------------------------------SVS 238
D + PN+Y N + C Q V
Sbjct: 148 DGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVD 207
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
AE+++ M GVRP+ +F + G E ++ M G + V Y++L+
Sbjct: 208 AAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLV 267
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEA 356
SGY K G L A M Q + T+ ++ + GN++ L+
Sbjct: 268 SGYCKAGCLHEALAVF------AEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALV--- 318
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
++ G+ ++ +I G D A + EM C + Y + YCK
Sbjct: 319 GQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKL 378
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R EA +L+ ++ + G++ DV Y ++ D SAF L R M + + +Y
Sbjct: 379 GRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITY 438
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+++ GL E R +++++ ++ + ++I CK G ++ A MI
Sbjct: 439 SSLIRGLCEERRLGDACELFEKMLQ-LGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMI 497
Query: 537 FLQFEPNDQTYLSLING 553
P+ TY LI+G
Sbjct: 498 KKGVLPDVVTYSVLIDG 514
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 105/251 (41%), Gaps = 48/251 (19%)
Query: 379 VNLGLSD----KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD-ISSSG 433
V L LSD A +L M G + + Y ++A C + EA +V D + +G
Sbjct: 126 VLLALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAG 185
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+V Y+ L+ A + + +A L MRE + RP L+
Sbjct: 186 CAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGV------------------RPSLVT 227
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N++++ CKAGR+EDA++ M P+ +Y +L++G
Sbjct: 228 ------------------FNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSG 269
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
Y A L ++ E+ QKG+ + + ++A+ + G + + +V + +
Sbjct: 270 YCKAGCLHEALAVFAEM-------AQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMR 322
Query: 614 EMKVFVDKWKY 624
E + ++++ +
Sbjct: 323 ERGLRMNEFTF 333
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 147/355 (41%), Gaps = 51/355 (14%)
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
N SFG + G ++ L +++ EFG S +V Y++LI G K G++ A
Sbjct: 157 NAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKN-- 214
Query: 315 LLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
L C M++ ++ TY ++ GF + G + + + + SGIV +
Sbjct: 215 LFC----KMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMY---ENMNRSGIVPNAYAYN 267
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
+IS N G+ DKA + EM G + G+ Y + C+ + EA +LV ++
Sbjct: 268 CLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKV 327
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GL ++ Y+ LI +A LF ++ + + +Y T++ G + E +
Sbjct: 328 GLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGY---SKVENL 384
Query: 493 AAFLDEVVE--------------------------DPRVEVKT-----------HDWNSI 515
A LD V E D E+ + + ++ +
Sbjct: 385 AGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVL 444
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
IH C G +++A + + + + +PN Y ++I+GY + L + +E+
Sbjct: 445 IHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEM 499
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 136/339 (40%), Gaps = 19/339 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ ++GCC V A+ + M LG+ PN+ ++ L + +GLQ +
Sbjct: 189 LSPNVVIYTTLIDGCCKN-GDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREG 247
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS--KETY 333
++ MN G Y+ LIS Y G ++ A + M + + TY
Sbjct: 248 FQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVF------AEMREKGIACGVMTY 301
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G + L+ + K+ S +V ++ +I+ ++G D A + ++
Sbjct: 302 NILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI---LINGFCDVGKMDTAVRLFNQ 358
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
+ + G S L Y + Y K A A LV ++ + Y LI+A
Sbjct: 359 LKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNY 418
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN-HRPELMAAF--LDEVVEDPRVEVKTH 510
A + M ++ + +Y ++ G N + E F L E+ P +
Sbjct: 419 TDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVI--- 475
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+N++IH +CK G A R L M+ PN ++ S
Sbjct: 476 -YNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCS 513
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 39/251 (15%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN 283
N + G C G + +A K++ ++ +G+ PN ++ L + G + V L + +
Sbjct: 302 NILIGGLCRG-KKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLK 360
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESA-----------------SRTILL---------- 316
G S +V Y++LI+GY K+ NL A + TIL+
Sbjct: 361 SSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTD 420
Query: 317 --CLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSV 370
C ME+S + TY ++ G NGN+K + + L+P+ ++ +
Sbjct: 421 KACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNT-- 478
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
+I G S +A +L+EM G + + T+ C++ + EA L+ +
Sbjct: 479 ---MIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMI 535
Query: 431 SSGLQLDVGNY 441
+SGL+ V Y
Sbjct: 536 NSGLKPSVSLY 546
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 105/266 (39%), Gaps = 21/266 (7%)
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
LE G+ + + +I C G A ++ +M+ G Y + + K+
Sbjct: 184 LEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGL 243
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
E Q+ +++ SG+ + Y+ LI AF +F +MRE I +Y
Sbjct: 244 QREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNI 303
Query: 479 IMTGLMENHR---PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
++ GL + + +++V P + +N +I+ FC G+++ A R ++
Sbjct: 304 LIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVT----YNILINGFCDVGKMDTAVRLFNQL 359
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYA 595
P TY +LI GY E L + E++ + + L+DAF
Sbjct: 360 KSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTI---LIDAF--- 413
Query: 596 LVKGGFFDAVMQVVEKSQEMKVFVDK 621
A + +K+ EM ++K
Sbjct: 414 --------ARLNYTDKACEMHSLMEK 431
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 8/159 (5%)
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
CS +Y + AY H T +A + + G ++ L+ I S F A+
Sbjct: 85 CSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAW 144
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENH---RPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+F ++ + + S+ ++TG E R + A L+E P V + + ++
Sbjct: 145 WIFNVLKSKVVLNAY-SFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVI----YTTL 199
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
I CK G + AK +M L PN TY L+NG+
Sbjct: 200 IDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGF 238
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 193/436 (44%), Gaps = 61/436 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ N + G C +++A K++ M + G P++ ++G+L + GL KI
Sbjct: 279 PDAETFNDVILGLC-KFDRINEAAKMVNRMLIRGFTPDDITYGYL-----MNGLC-KIGR 331
Query: 278 LESLMNEFGFSSQ--MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+++ + F + V +++LI G+V G L+ A + +L + D TY
Sbjct: 332 VDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDA-KAVLSDMVTSYGIVPDVC--TYNS 388
Query: 336 VVKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G+ + KGL L +E + + G + ++ LG D+A+++L+EM
Sbjct: 389 LIYGYWK----KGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEM 444
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+A G + + A+CKEHR EA ++ ++ G + DV +++LI +
Sbjct: 445 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 504
Query: 455 QSAFSLFRDM-------------------------REAR--IYDL--KGS------YLTI 479
+ A L RDM +EAR + ++ +GS Y ++
Sbjct: 505 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSL 564
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ GL + + ++++ D V + N +I+ C++G +E+A + M+
Sbjct: 565 IKGLCRAGEVDKARSLFEKMLRDGLVP-SSISCNILINGLCRSGMVEEAVEFQKEMVLRG 623
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKG 599
P+ T+ SLING A + L M+ RK+ +G +N + L KG
Sbjct: 624 STPDIVTFNSLINGLCRAGRIEDGLTMF----RKLQAEGIPPDTVTYN---TLMSWLCKG 676
Query: 600 GF-FDAVMQVVEKSQE 614
GF +DA + + E ++
Sbjct: 677 GFVYDACLLLDEGIED 692
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 152/363 (41%), Gaps = 23/363 (6%)
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIALDENLDF----MKPNIYACNAALEGCCYGLQSV 237
G + D+C NS + K + +AL+ D KPN+Y+ ++G C L +
Sbjct: 378 GIVPDVCTYNSLIYGYWK--KGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFC-KLGKI 434
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+A ++ MS G++PN F L + + + VE+ M G + ++SL
Sbjct: 435 DEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 494
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
ISG ++ ++ A + + G + + TY ++ FL+ G +K L+ E
Sbjct: 495 ISGLCEVDEIKHALWLLRDMISEGVVANT----VTYNTLINAFLRRGEIKEARKLVNE-- 548
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG---CSVGLGVYVPTLKAYC 414
+ G ++D +I G DKA S+ ++M G S+ + + L C
Sbjct: 549 -MVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGL---C 604
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+ EA + ++ G D+ +++LI + + ++FR ++ I
Sbjct: 605 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 664
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+Y T+M+ L + LDE +ED V W+ ++ + L+ +RT
Sbjct: 665 TYNTLMSWLCKGGFVYDACLLLDEGIEDGFVP-NDRTWSILLQSLVPQETLD--RRTFYN 721
Query: 535 MIF 537
+F
Sbjct: 722 AVF 724
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 130/317 (41%), Gaps = 25/317 (7%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M + G + + S++ Y K G +T L L N+ + + ++Y VV L
Sbjct: 131 MKDEGIVFKESLFISIMRDYDKAG---FPGQTTRLMLEMRNVYSCEPTFKSY-NVVLEIL 186
Query: 342 QNGNV-KGLANLIIE--AQKLEPSGIVVDRSVGFGII-SACVNLGLSDKAHSILDEMNAC 397
+GN K AN+ + ++K+ P+ FG++ A + D A S+L +M
Sbjct: 187 VSGNCHKVAANVFYDMLSRKIPPTLFT------FGVVMKALCAVNEVDSALSVLRDMTKH 240
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC +Y + + K +R EA QL+ ++ G D ++ +I A
Sbjct: 241 GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 300
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+ M +Y +M GL + R + + + V +N++IH
Sbjct: 301 AKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVI-----FNTLIH 355
Query: 518 AFCKAGRLEDAKRTLRRMIF-LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
F GRL+DAK L M+ P+ TY SLI GY ++ + E+ R +
Sbjct: 356 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKK----GLVGLALEVLRDMRN 411
Query: 577 DGQKGIKFEHN-LVDAF 592
G K + + LVD F
Sbjct: 412 KGCKPNVYSYTILVDGF 428
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 134/308 (43%), Gaps = 18/308 (5%)
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT 313
PNE + + + G ++ EL M E G ++ +S+LI G + G ++ A
Sbjct: 109 PNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQ 168
Query: 314 ILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK-------LEPSGIVV 366
E+ + TY VV G + + L + +K EP V+
Sbjct: 169 F-----KSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPD--VI 221
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
S +I A DKA+ M A GC+ + Y + CK R +E +L+
Sbjct: 222 SYST---VIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELL 278
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ + G +++ +++A++ A + + + A F + ++ +Y + GL +
Sbjct: 279 LHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKA 338
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
R + L E+VE +V ++SII FCKAGR++ A RM+ + P+ T
Sbjct: 339 GRVDEAYRILLEMVES-KVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVT 397
Query: 547 YLSLINGY 554
+++L++G+
Sbjct: 398 FMTLLHGF 405
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 137/336 (40%), Gaps = 62/336 (18%)
Query: 283 NEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET-YCEVVKGFL 341
N+ GF + L++ +VK E A R + +E F E Y V+ GF
Sbjct: 68 NKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLL-----KEELEPLCFPNEIMYTTVINGFC 122
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG--C 399
+ G V L+ E ++ G+ +D + +I G D+A L++ + G C
Sbjct: 123 KAGQVDQAFELLDE---MKERGVKMDVLLHSTLIQGLCRKGRIDEA---LEQFKSMGEEC 176
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDI-----SSSGLQLDVGNYDALIEASITSQDF 454
S + Y + CK +R EA +L D+ +S G + DV +Y +I+A +Q
Sbjct: 177 SPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRV 236
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP------------------------- 489
A+ F+ MR +Y +++ GL + RP
Sbjct: 237 DKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAM 296
Query: 490 ----------ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
E F + +++ + + +N +H CKAGR+++A R L M+ +
Sbjct: 297 LHALWKNDEQEKACQFFERLLKSGK-KPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESK 355
Query: 540 FEPNDQTYLSLINGYV------TAEQYFSVLMMWHE 569
P+ TY S+I+G+ A+ F+ MM HE
Sbjct: 356 VTPDVITYSSIIDGFCKAGRMDKADDVFT-RMMVHE 390
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 16/244 (6%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+++A V ++AH +L E C +Y + +CK + +A +L+ ++ G
Sbjct: 82 LLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERG 141
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+++DV + LI+ A F+ M E ++ +Y T++ GL + +R +
Sbjct: 142 VKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVI-TYNTVVNGLCKANRIDEAL 200
Query: 494 AFLDEVVE----DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
D++ + E ++++I A CKA R++ A +RM + PN TY S
Sbjct: 201 ELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSS 260
Query: 550 LINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVD--AFLYALVKGGFFDAVMQ 607
LI+G ++ L + +K K F N++D A L+AL K + Q
Sbjct: 261 LIDGLCKVDRPSECLELLLHMKEK---------GFGINIIDFNAMLHALWKNDEQEKACQ 311
Query: 608 VVEK 611
E+
Sbjct: 312 FFER 315
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 23/149 (15%)
Query: 474 GSYLTI-MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS--------------IIHA 518
G YL + G PE+ L +V EDP V W +++A
Sbjct: 27 GPYLCRDLAGYASTVTPEVAGRVLQQV-EDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNA 85
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
F KA R E+A R L+ + PN+ Y ++ING+ A Q + E+K
Sbjct: 86 FVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMK------- 138
Query: 579 QKGIKFEHNLVDAFLYALVKGGFFDAVMQ 607
++G+K + L + L + G D ++
Sbjct: 139 ERGVKMDVLLHSTLIQGLCRKGRIDEALE 167
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 60/335 (17%), Positives = 123/335 (36%), Gaps = 44/335 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ + + ++ C Q V A + + M +G PN ++ L + +
Sbjct: 217 EPDVISYSTVIDALCKA-QRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECL 275
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
EL M E GF ++ +++++ K E A + L G TY
Sbjct: 276 ELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNV----VTYNVA 331
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V G + G V +++E + + + V+ S II G DKA + M
Sbjct: 332 VHGLCKAGRVDEAYRILLEMVESKVTPDVITYS---SIIDGFCKAGRMDKADDVFTRMMV 388
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
C ++ L + + ++ EA ++ D+ ++G + Y+ L++ + +S
Sbjct: 389 HECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVES 448
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A ++ M+ + +P+ + + +I
Sbjct: 449 ALEIYHKMKRKK------------------RQPD------------------CNTYAPLI 472
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
C+A R+++AK L M PN +L+
Sbjct: 473 QCLCRARRVDEAKEFLDVMEADNVVPNGAICHALV 507
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G Q + L+ A + ++ + A L ++ E + + Y T++ G + + +
Sbjct: 71 GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130
Query: 493 AAFLDEVVE-DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
LDE+ E +++V H +++I C+ GR+++A + M + PN TY +++
Sbjct: 131 FELLDEMKERGVKMDVLLH--STLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVV 187
Query: 552 NGYVTAEQYFSVLMMWHEIKRK 573
NG A + L ++ +++++
Sbjct: 188 NGLCKANRIDEALELFDDMEKR 209
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 161/372 (43%), Gaps = 36/372 (9%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+K ++ +CN + G + + D E V + M + P SF + G K
Sbjct: 124 LKLSVTSCNPLMSGL-VKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF------- 328
++ M G S+ ++ Y++LI GY K+G + G M ++D
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKI-------------GKMYKADAILKEMRA 229
Query: 329 -----SKETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNL 381
++ T+ ++ GF ++ NV + E Q ++P+ + + +I+ N
Sbjct: 230 DGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYN-----SLINGLCNN 284
Query: 382 GLSDKAHSILDEM-NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G ++A ++ D+M N+C + + L +CK +A +L D+ G+ +V
Sbjct: 285 GKVNEATALRDQMVNSC-LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTT 343
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y+ LI+A ++ + AF+L+R M + +Y ++ GL E + E +
Sbjct: 344 YNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSE-M 402
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+ ++ +N +I + C G ++ A R L M +P+ TY ++I+GY
Sbjct: 403 DTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNL 462
Query: 561 FSVLMMWHEIKR 572
+ L + ++++
Sbjct: 463 RAALNLRSQMEK 474
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 15/310 (4%)
Query: 176 PFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ 235
P E+ L+D K+ N A +KVF E R + KPN+ N+ + G C
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGV-------KPNVVTYNSLINGLCNN-G 285
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
V++A + + M ++PN + L + + ++ EL M + G + + Y+
Sbjct: 286 KVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYN 345
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
LI Y K N+E A + LG G D S TY ++ G + G+++ NL+ E
Sbjct: 346 ILIDAYCKDENMEDAFALYRIMLGKGVC--PDVS--TYNCLIAGLCRKGDLEAARNLVSE 401
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
++ ++ +I + N G KA +LDEM G Y + YCK
Sbjct: 402 MDTKHLKADLITYNI---LIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCK 458
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
E A L + G +V Y+ LI+ + A L +M E + + +
Sbjct: 459 EGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMT 518
Query: 476 YLTIMTGLME 485
Y + +ME
Sbjct: 519 YEIVTEEMME 528
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 148/350 (42%), Gaps = 18/350 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P + + N + G C + ++ A +IE M V GV N ++ L Y G K+
Sbjct: 159 IEPTLISFNIVINGLCK-VGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKM 217
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
+ ++++ E G V ++ LI G+ K N+ +A + N + + T
Sbjct: 218 YKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKV----FAEMNRQGVKPNVVT 273
Query: 333 YCEVVKGFLQNGNVK---GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
Y ++ G NG V L + ++ + L+P+ I+ ++ G C N + +A
Sbjct: 274 YNSLINGLCNNGKVNEATALRDQMVNSC-LKPN-IITHNALLNGF---CKN-KMVKQAGE 327
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ D+M G + + Y + AYCK+ +A L + G+ DV Y+ LI
Sbjct: 328 LFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLC 387
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
D ++A +L +M + +Y ++ L + LDE+ ++
Sbjct: 388 RKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKG-LKPSQ 446
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+N++I +CK G L A +M + N TY LI G+ ++
Sbjct: 447 LTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDK 496
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
AY K RT + S GL+L V + + L+ + + ++++M RI
Sbjct: 102 AYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEP 161
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD---WNSIIHAFCKAGRLE-- 526
S+ ++ GL + + +++ED +V + + +N++I +CK G++
Sbjct: 162 TLISFNIVINGLCKVGKLNKAG----DIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKM 217
Query: 527 -DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
A L+ M PN+ T+ LI+G+ + + + ++ E+ R+
Sbjct: 218 YKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQ 265
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+ T E TQ+++ +S + D L+ A + + F F+ A Y LK S
Sbjct: 72 YSTQEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFK---RASDYGLKLSV 128
Query: 477 LT---IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+ +M+GL++ M E++ R+E +N +I+ CK G+L A +
Sbjct: 129 TSCNPLMSGLVKVGEIGDMEFVYKEMIR-RRIEPTLISFNIVINGLCKVGKLNKAGDIIE 187
Query: 534 RMIFLQFEPNDQTYLSLINGY 554
M N TY +LI+GY
Sbjct: 188 DMKVRGVSANVITYNTLIDGY 208
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 130/325 (40%), Gaps = 12/325 (3%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G P+ ++ Y GL L LM G Y++L+ G G + A
Sbjct: 102 GFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREA 161
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDR 368
G + Y +V G G + L+ +A + EP+ +V +
Sbjct: 162 MSV----FAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYN- 216
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+I N+G + A + + M+ GCS + Y + +CK + A L
Sbjct: 217 ----ALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSR 272
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ +GL +V Y ALI+ + A+ L + M + + + + ++ L ++ R
Sbjct: 273 MVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHER 332
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
L +++ ++V + S+I CKAGR A R ++ ++ F P+ TY
Sbjct: 333 VGEAQLLLGSLIQKG-IKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYS 391
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRK 573
SLI+G ++ +++ ++ K
Sbjct: 392 SLIDGLCRQKELSEAMLVLDDMMEK 416
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 140/337 (41%), Gaps = 11/337 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++YA + G C G +AE ++ G PN + L Y G E V+
Sbjct: 177 PHVYA--TMVHGLC-GAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVD 233
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M+ G S + Y+ LISG+ K L+ A + G + + TY ++
Sbjct: 234 VFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVP----NVVTYTALI 289
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+G +G + L+ Q +E SG+V + +I A +A +L +
Sbjct: 290 QGQCSDGQLDCAYRLL---QSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQK 346
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G V VY + CK R A A +L+ + S G D Y +LI+ ++ A
Sbjct: 347 GIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEA 406
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+ DM E + +Y I+ L+ + LD+++ ++ + +
Sbjct: 407 MLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIA-AGIKPDVFTYTIFVR 465
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++C GR+EDA+ + M+ PN TY +LI GY
Sbjct: 466 SYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGY 502
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 131/326 (40%), Gaps = 32/326 (9%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y++LI+ Y G+L ++ R + L G S Y V G+ + G + L
Sbjct: 75 YTTLINAYCLAGDLPASKRHLSSLLRAGFAPDS----HAYTSFVVGYCRAGLLAHACRLF 130
Query: 354 IEAQKLEP-SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ L P G V ++ G+ +A S+ M A GC+ VY +
Sbjct: 131 V----LMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHG 186
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
C RT EA L+ D + G + +V Y+ALI+ D + A +F M D+
Sbjct: 187 LCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERM------DV 240
Query: 473 KG------SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
G +Y +++G ++ + + +V D + + ++I C G+L+
Sbjct: 241 NGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMV-DAGLVPNVVTYTALIQGQCSDGQLD 299
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEH 586
A R L+ M PN+ T LI+ E+ ++ + QKGIK
Sbjct: 300 CAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLI-------QKGIKVNE 352
Query: 587 NLVDAFLYALVKGGFF---DAVMQVV 609
+ + + L K G F D +MQ +
Sbjct: 353 IVYTSLIDGLCKAGRFAAADRLMQTL 378
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 156/357 (43%), Gaps = 39/357 (10%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ A ++G C Q + A +++++M G+ PNE + L + AL E++ E
Sbjct: 280 PNVVTYTALIQGQCSDGQ-LDCAYRLLQSMENSGLVPNEWTCSVL--IDALCK-HERVGE 335
Query: 278 LESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+ L+ G + Y+SLI G K G +A R + + G + + TY
Sbjct: 336 AQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDA----HTYS 391
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G + K L+ ++ + G+ II V +D + ILD+M
Sbjct: 392 SLIDGLCRQ---KELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKM 448
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI----EASIT 450
A G + Y +++YC E R +A +++ + G+ ++ Y+ALI +T
Sbjct: 449 IAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLT 508
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME----NHRP------------ELMAA 494
SQ AFS F+ M + SY ++ L++ N+ P + +
Sbjct: 509 SQ----AFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHG 564
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
L+E+V+ ++ + +N + + C+ RL++AK L M P++ Y S+I
Sbjct: 565 LLEEMVK-LQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSII 620
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 97/242 (40%), Gaps = 25/242 (10%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
++K+++ M G++P+ ++ Y +G E + M + G +V Y++LI
Sbjct: 441 SKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALIC 500
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN---------------- 343
GY LG A T + G ++E+Y +++ ++
Sbjct: 501 GYANLGLTSQAFSTFKHMVANG----CKPNEESYTVLLRLLIKKESSNNIPANSVSIWKI 556
Query: 344 GNVKGLANLIIEAQKLE-PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
+K L L+ E KL+ PS I + +++ + D+A +L EM + +
Sbjct: 557 AEMKYLHGLLEEMVKLQLPSEIDIYNC----FLTSLCRVDRLDEAKILLIEMQSANLTPS 612
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
VY + C+ EA V + SG + +Y +I + Q+A +F
Sbjct: 613 EDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFG 672
Query: 463 DM 464
DM
Sbjct: 673 DM 674
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 176/421 (41%), Gaps = 44/421 (10%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-QEKIV 276
P++ ACN+ L + + DA KV + M G + S L +KG+ E V
Sbjct: 168 PDVIACNSLL-SLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCIL-----VKGMCNEGKV 221
Query: 277 ELESLMNEF----GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
E+ + E G +VFY+++I GY KLG++E+A G M + ET
Sbjct: 222 EVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMP----TLET 277
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF--GIISACVNLGLS-DKAHS 389
+ ++ GF + G+ L+ E ++ G+ V SV F II A G D A S
Sbjct: 278 FGTMINGFCKEGDFVASDRLLSEVKE---RGLRV--SVWFLNNIIDAKYRHGYKVDPAES 332
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
I + A C + Y + CKE + A + + S GL + +Y LI+A
Sbjct: 333 I-GWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYC 391
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE------DP 503
S+++ A L M E +Y ++ GL +++ +D+ V D
Sbjct: 392 KSKEYDIASKLLLQMAERGCKPDIVTYGILIHGL-------VVSGHMDDAVNMKVKLIDR 444
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
V +N ++ CK GR AK M+ P+ Y +LI+G++ + +
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDF--- 501
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWK 623
E ++ S +KG+K + +A + + G D + + + E + DK+
Sbjct: 502 ----DEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557
Query: 624 Y 624
Y
Sbjct: 558 Y 558
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 115/286 (40%), Gaps = 15/286 (5%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A K++ M+ G +P+ ++G L + + G + V ++ + + G S Y+ L+S
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
G K G A L + + Y ++ GF+++G+ EA+K+
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDA----YVYATLIDGFIRSGDFD-------EARKV 507
Query: 360 ----EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
G+ VD +I G+ D+A + ++ MN Y + Y K
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
+ A A ++ + + + +V Y +LI DF+ A F++M+ + +
Sbjct: 568 QQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
Y T++ L + A + E++ + +N ++ F K
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 126/336 (37%), Gaps = 46/336 (13%)
Query: 217 KPNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
KP++ N + C G + V A ++ S G+ PN S+ L Y +
Sbjct: 342 KPDVATYNILINRLCKEGKKEV--AVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIA 399
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+L M E G +V Y LI G V G+++ A + + G + Y
Sbjct: 400 SKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDA----AIYNM 455
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + G + L ++ ++ L+ I+ D V +I + G D+A +
Sbjct: 456 LMSGLCKTG--RFLPAKLLFSEMLD-RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSV 512
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G V + + +K +C+ EA + ++ L D Y +I+ + QD
Sbjct: 513 EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMA 572
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+A +FR M + + +P ++ + S+
Sbjct: 573 TAIKIFRYMEKNKC------------------KPNVVT------------------YTSL 596
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
I+ FC G + A+ T + M PN TY +LI
Sbjct: 597 INGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 176/400 (44%), Gaps = 24/400 (6%)
Query: 227 LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG 286
+ G C GL V +A ++++ M G P ++GFL L+GL ++ + + G
Sbjct: 252 VRGMC-GLGRVREAARLVDRMMTKGCMPGVMTYGFL-----LQGLC-RVRQADEARAMLG 304
Query: 287 FSSQM--VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNG 344
++ V ++++I G + G L A+ + +G ++ TY ++ G + G
Sbjct: 305 RVPELNVVLFNTVIGGCLAEGKLAEATE-LYETMG---LKGCQPDAHTYSILMHGLCKLG 360
Query: 345 NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
+ L+ E +K + VV ++ + S C N G+ D ++L+EM+A G ++
Sbjct: 361 RIGSAVRLLREMEKKGFAPNVVTYTIV--LHSFCKN-GMWDDTRALLEEMSAKGLTLNSQ 417
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y + A CK+ R EA L+ ++ S G D+ +Y+ +I ++ + A +F ++
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
E + +Y TI+ L+ + R + E++ + +N +I A CK G
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILH-GCSLDVVSYNGLIKAMCKDGN 536
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF 584
++ + L M +PN+ +Y LI+ + L E+ +++ G
Sbjct: 537 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL----ELSKQMLNQGLAPDIV 592
Query: 585 EHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+N + L K G+ A + ++EK V D Y
Sbjct: 593 TYN---TLINGLCKMGWMHAALNLLEKLHNENVHPDIITY 629
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 17/255 (6%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G V D + +I A + G +A ++L+EM GC+ + + ++ C R EA
Sbjct: 205 GCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREA 264
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+LV + + G V Y L++ + A ++ + E + + T++ G
Sbjct: 265 ARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV----LFNTVIGG 320
Query: 483 -LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
L E E A L E + + H ++ ++H CK GR+ A R LR M F
Sbjct: 321 CLAEGKLAE--ATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFA 378
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
PN TY +++ + MW + + + KG+ + +YAL K G
Sbjct: 379 PNVVTYTIVLHSFCKNG-------MWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR 431
Query: 602 FDAVMQVVEKSQEMK 616
D M ++ QEM+
Sbjct: 432 MDEAMGLI---QEMR 443
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 159/385 (41%), Gaps = 45/385 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ + ++G C G+ + +A+ +++ M G PN ++ L Y +G EK +E
Sbjct: 366 PDVFTYSILIKGLC-GVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ S M E G ++ +S+LI GY K G +E+A + G + Y ++
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV----VAYTALI 480
Query: 338 KGFLQNGNVKGLANLIIEAQK--LEPS----GIVVDRSVGFGIISACVNLGL----SDKA 387
G ++GN K L E Q+ L P+ ++D G IS + L L +D
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTT 540
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
S +E++ CS +Y ++ C + R +A++ D+ SGL+ DV +I+
Sbjct: 541 GSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQG 600
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ + L D+ + I Y + G E+ + +F E V+ P V
Sbjct: 601 HFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQ-PLDRV 659
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+ W S T+R L + S Y+TA S +++W
Sbjct: 660 NSEPWGSY---------------TIRSRFQLCVVTEKKECHS---SYLTAFGIHSFVLLW 701
Query: 568 -----------HEIKRKISTDGQKG 581
HEI +K+ GQKG
Sbjct: 702 YFHTILKPPSPHEILKKVPFIGQKG 726
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 177/434 (40%), Gaps = 58/434 (13%)
Query: 182 GFLVDICRKNSNFVAFLKVFEE--------------------C--CRIALDENL------ 213
G L+D C + +F+ ++F+E C RI+ E++
Sbjct: 197 GTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRN 256
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
M PN+Y N ++G C + V A ++ M G+ PN +FG L + L E
Sbjct: 257 SGMLPNLYTYNTMMDGYCK-IAHVKKALELYXEMLGDGLLPNVVTFGIL--IDGLCKTDE 313
Query: 274 KIVELESL--MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
+ + L M FG + Y+ LI GY K GNL A L L +E+ + +
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA-----LSLHS-EIEKHEILPD 367
Query: 332 --TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
TY ++KG ++ L+ Q+++ G + + +I G +KA
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLL---QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ +M G + + + YCK + A L ++ GL DV Y ALI+
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHF 484
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVK 508
+ + AF L ++M+EA ++ + ++ GL ++ R + + FL + D K
Sbjct: 485 KDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDT-TGSK 543
Query: 509 THD------------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
T++ + ++I C GR+ A + M P+ T + +I G+
Sbjct: 544 TNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFR 603
Query: 557 AEQYFSVLMMWHEI 570
A V+M+ +I
Sbjct: 604 AMHLRDVMMLQADI 617
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 98/261 (37%), Gaps = 25/261 (9%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++ V G D + +M A G S + Y + C++ +A +L ++
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ V Y LI A S+FR MR + + +Y T+M G + +
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283
Query: 494 AFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
E++ D P V + +I CK + A++ L M PN Y L
Sbjct: 284 ELYXEMLGDGLLPNVVT----FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCL 339
Query: 551 INGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
I+GY A L + EI++ L D F Y+++ G V+
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEK------------HEILPDVFTYSILIKGLCG-----VD 382
Query: 611 KSQEMKVFVDKWKYKQAFMEN 631
+ +E + + K K+ F+ N
Sbjct: 383 RMEEADGLLQEMK-KKGFLPN 402
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 170/409 (41%), Gaps = 22/409 (5%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T TL+ + N+ A + M ++ + +V +C + E+
Sbjct: 300 TYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCD--------MGRIED 351
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD-AEKVIETMSVLGVRPNESSFGFL 262
+I +D KPN+Y + + G Q VS A + MS GV PN ++ L
Sbjct: 352 AWKIFIDMKKKGCKPNVYTYTSLISG-----QRVSRMAIGLFHRMSRDGVVPNTVTYNAL 406
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ + + + ++M + G Y+ LI GY +G+ E A + L G
Sbjct: 407 MNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKG-- 464
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ + TY ++KG+ +G+ +A ++E K +G D +IS +
Sbjct: 465 --RPTPTLVTYNIIIKGYCDSGDTD-VAIRVLELMK--ANGCQPDEWSYTELISGFCKIS 519
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+ A + +EM G Y + YCK+ + A +++ + SG + +V Y+
Sbjct: 520 KMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYN 579
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
LI +F A L + M E +I +Y T++ GL N L +++V+
Sbjct: 580 VLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKH 639
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+ H ++S+I A + GR+E+A+ + P++ TY+ +I
Sbjct: 640 GCLP-NLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMI 687
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 26/217 (11%)
Query: 340 FLQNGNVKGL---ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
F Q G GL L+I+ KL + V+DR H IL E
Sbjct: 184 FSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDR------------------YHQILRE--- 222
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G L +Y + A CK+ +A ++ + SG++ D Y ++I ++D S
Sbjct: 223 -GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDS 281
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
AF +F M E +Y T++ GL + R F+ E+ V H + + I
Sbjct: 282 AFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRH-GVLPTVHTFTAPI 340
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A C GR+EDA + M +PN TY SLI+G
Sbjct: 341 VALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG 377
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 110/269 (40%), Gaps = 11/269 (4%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
G ++ Y+S+I+ K GN+ A I G M+ F TY ++ G+ +N +
Sbjct: 223 GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSG-MKPDTF---TYTSMILGYCRNRD 278
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
+ + +++ G + + +I+ N G ++A + EM G +
Sbjct: 279 LDSAFEIF---NRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHT 335
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
+ + A C R +A ++ +D+ G + +V Y +LI S + A LF M
Sbjct: 336 FTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVS---RMAIGLFHRMS 392
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+ +Y +M LMEN + A + ++ T +N +I +C G
Sbjct: 393 RDGVVPNTVTYNALMNVLMENMEID-SALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDT 451
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
E A L M+ + P TY +I GY
Sbjct: 452 EKAMSMLTNMLKGRPTPTLVTYNIIIKGY 480
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 145/363 (39%), Gaps = 33/363 (9%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN A + G C + + A +++E M G RPN ++ L + + E
Sbjct: 538 PNEVTYTALISGYCKD-EKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 596
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L +M E S +V YS++I+G G + A + G + + TY ++
Sbjct: 597 LCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLP----NLHTYSSLI 652
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+ Q G V+ + E +K G++ D +I CV G D+A L EM
Sbjct: 653 QALGQEGRVEEAEEMFSELKK---QGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINA 709
Query: 398 GCSVGLGVYVPTLKAYCKE---HR-----TAEATQL---------VMDISSSGL-----Q 435
GC L Y +K E H+ A +T V+ + SS L +
Sbjct: 710 GCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFE 769
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL-MAA 494
L YDAL+ S + A +L+R M + +Y + L+ + +L M
Sbjct: 770 LSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDV 829
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
F + + D R E+ + +I C+ R ++A+ +M+ ++ + LING
Sbjct: 830 F--KHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGL 887
Query: 555 VTA 557
+ A
Sbjct: 888 LGA 890
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/409 (19%), Positives = 154/409 (37%), Gaps = 19/409 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN+ N+ + C +V DAE +I + G++P+ ++ + Y +
Sbjct: 224 LQPNLLIYNSVINALCKD-GNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSA 282
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
E+ + M+E G YS+LI+G G + A I G + + T+
Sbjct: 283 FEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLP----TVHTFTA 338
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ G ++ + I+ +K G + +IS +S A + M+
Sbjct: 339 PIVALCDMGRIEDAWKIFIDMKK---KGCKPNVYTYTSLISG---QRVSRMAIGLFHRMS 392
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G Y + + A + + G + +Y+ LI T D +
Sbjct: 393 RDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTE 452
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A S+ +M + R +Y I+ G ++ ++ L E+++ + + +
Sbjct: 453 KAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVL-ELMKANGCQPDEWSYTEL 511
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I FCK ++E A M+ PN+ TY +LI+GY E+ M +KR
Sbjct: 512 ISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKR--- 568
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
G + + ++ L K F ++ + E K+ D Y
Sbjct: 569 ----SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTY 613
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 185/483 (38%), Gaps = 99/483 (20%)
Query: 193 NFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
+FV L +E + L L P++ + + + G C + K+IE M G+
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR-FGELDKVWKLIEVMKRKGL 312
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEF------GFSSQMVFYSSLISGYVKLGN 306
+PN +G ++ GL +I +L F G V Y++LI G+ K G+
Sbjct: 313 KPNSYIYG------SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 307 LESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPS 362
+ +AS+ M D + + TY ++ GF Q G++ L E + LEP
Sbjct: 367 IRAASKFFY------EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 363 GIVVDRSV-----------GFGIISACVNLGLS-------------------DKAHSILD 392
+ + F + + + G S D A+ +L
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM G + Y + CK EA +LV + ++GL D Y L++A S
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A + ++M KG TI+T +
Sbjct: 541 EMDKAQEILKEMLG------KGLQPTIVT------------------------------F 564
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI-K 571
N +++ FC G LED ++ L M+ PN T+ SL+ Y + ++ ++
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 572 RKISTDGQ------KGIKFEHNLVDA-FLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
R + DG+ KG N+ +A FL+ +KG F + V S +K F+ + K+
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS--VSVSTYSVLIKGFLKRKKF 682
Query: 625 KQA 627
+A
Sbjct: 683 LEA 685
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 152/387 (39%), Gaps = 42/387 (10%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
+VFE+ L ++D +CN L + A V +GV N +S
Sbjct: 196 RVFEKMLNYGLVLSVD-------SCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI---- 314
+ + + G ++ L LM G++ ++ YS++++GY + G L+ + I
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 315 ----------------LLC----LGGGNMEQSDFSKE-------TYCEVVKGFLQNGNVK 347
LLC L S+ ++ Y ++ GF + G+++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
+ E + I D IIS +G +A + EM G +
Sbjct: 369 AASKFFYE---MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ YCK +A ++ + +G +V Y LI+ D SA L +M +
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+ +Y +I+ GL ++ E + E E + T + +++ A+CK+G ++
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE-FEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGY 554
A+ L+ M+ +P T+ L+NG+
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/399 (19%), Positives = 168/399 (42%), Gaps = 51/399 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ A + G C + + +A K+ M G+ P+ +F L Y G +
Sbjct: 382 ITPDVLTYTAIISGFCQ-IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ + M + G S +V Y++LI G K G+L+SA+ +L + ++ + F TY
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE-LLHEMWKIGLQPNIF---TYNS 496
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+V G ++GN++ L+ E E +G+ D ++ A G DKA IL EM
Sbjct: 497 IVNGLCKSGNIEEAVKLVGE---FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + + + +C + +L+ + + G+ + +++L++ + +
Sbjct: 554 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 613
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+A ++++DM + P + KT++ ++
Sbjct: 614 AATAIYKDMCSRGV--------------------------------GP--DGKTYE--NL 637
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
+ CKA +++A + M F + TY LI G++ +++ ++ +++R
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR--- 694
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+G+ + + D F KG D ++ +++ E
Sbjct: 695 ----EGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 176/437 (40%), Gaps = 64/437 (14%)
Query: 186 DICRKNSN-FVAFLKVFEECCRI-------ALDENLDFMKPNIYACNAALEGCCYGLQSV 237
D+C S+ F +K + C I L + FM P + + NA L+ +++
Sbjct: 128 DLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFM-PGVLSYNAVLDATIRSKRNI 186
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
S AE V + M V PN ++ L + L G + + M + G +V Y++L
Sbjct: 187 SFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTL 246
Query: 298 ISGYVKLGNLESASRTIL-LCLGG------------------GNMEQSDF---------- 328
I GY KL ++ + + L G G M++ F
Sbjct: 247 IDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGY 306
Query: 329 --SKETYCEVVKGFLQNGNVKGLANLIIEAQKLE----PSGIVVDRSVGFGIISACVNLG 382
+ TY ++KG+ + GN L++ A+ L PS I +I + G
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFH--QALVMHAEMLRHGLSPSVITYT-----SLIHSMCKAG 359
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
++A LD+M G Y + + ++ EA +++ ++ +G V Y+
Sbjct: 360 NMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYN 419
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
ALI + A ++ DM+E + SY T+++G ++ +DE +
Sbjct: 420 ALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYD-------VDEALRV 472
Query: 503 PR------VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
R ++ T ++S+I FC+ R ++A M+ + P++ TY +LIN Y
Sbjct: 473 KRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCM 532
Query: 557 AEQYFSVLMMWHEIKRK 573
+ + +E+ K
Sbjct: 533 EGDLQKAIQLHNEMVEK 549
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 164/416 (39%), Gaps = 82/416 (19%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++G C L+ + D +++ +M++ G+ PN S+ + +G ++I
Sbjct: 238 PNVVTYNTLIDGYC-KLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISF 296
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA------------SRTIL--------LC 317
+ + MN+ G+S V Y++LI GY K GN A S +++ +C
Sbjct: 297 VLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMC 356
Query: 318 LGGGNMEQSDF-----------SKETYCEVVKGFLQNG---------------------- 344
G ++F ++ TY +V GF Q G
Sbjct: 357 KAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVV 416
Query: 345 ------NVKGLANLIIEA----QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
N +A +++A + ++ G+ D ++S D+A + +M
Sbjct: 417 TYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKM 476
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
A G Y ++ +C++ RT EA L ++ GL D Y ALI A D
Sbjct: 477 VAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE-----LMAAFLDEVVED------- 502
Q A L +M E + +Y ++ GL + R L+ F +E V
Sbjct: 537 QKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 503 ----PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+E K+ S+I FC G + +A + M+ +P+ Y +I+G+
Sbjct: 597 IENCSNIEFKS--VVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGH 650
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 105/491 (21%), Positives = 188/491 (38%), Gaps = 44/491 (8%)
Query: 80 LTNNTDEAWKSFKSLTANSLFPSKPVTNSLI---AHLSSLQDNHNLKRAFASVVYVIEKN 136
L N D A + F + P+ N+LI L + D L R+ A +
Sbjct: 217 LAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMA----LKGLE 272
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVA 196
P L+ + V + G R +F L + M K Y + + + C K NF
Sbjct: 273 PNLISYNVV--INGLCREGRMKEISFVLTE-MNKRGYSLDEVTYNTLIKGYC-KEGNFHQ 328
Query: 197 FLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
L + E R L P++ + + C +++ A + ++ M V G+ PNE
Sbjct: 329 ALVMHAEMLRHGLS-------PSVITYTSLIHSMCKA-GNMNRATEFLDQMRVRGLCPNE 380
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
++ L ++ KG + + M + GFS +V Y++LI+G+ G + A +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVL-- 438
Query: 317 CLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
+M++ + + +Y V+ GF ++ +V + +K+ GI D +
Sbjct: 439 ----EDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRV---KRKMVAKGIKPDTITYSSL 491
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
I + +A + DEM G Y + AYC E +A QL ++ G+
Sbjct: 492 IQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGV 551
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM-----------TGL 483
DV Y LI + A L + +Y T++ L
Sbjct: 552 LPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
++ + M D+V E + D +N +IH C+ G + A + M+ F
Sbjct: 612 IKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGF 671
Query: 541 EPNDQTYLSLI 551
+ T ++L+
Sbjct: 672 LLHTVTVIALV 682
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 140/329 (42%), Gaps = 51/329 (15%)
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQEKIVELESLMNEFGFS 288
C GL V +A K+ M V G+ PNE ++ L G L + IV L+ ++++ G
Sbjct: 315 CKEGL--VREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ-GLV 371
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNV 346
+V Y+ ++ G K G + A + L ME++ Y ++ G N N
Sbjct: 372 PNVVTYTVMVDGLCKEGKVAVADDVLSL------MERAGVKANELLYTTLIHGHFMNKNS 425
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
+ +L+ E ++ G+ +D S+ +I + D+A S+L +M+ CG +Y
Sbjct: 426 ERALDLLNE---MKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIY 482
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ A+ K + +EA L+ I SGLQ +V Y ALI+ + A S F MRE
Sbjct: 483 TTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRE 542
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
GL DP V+V + ++I FCK G L
Sbjct: 543 --------------LGL------------------DPNVQV----YTTLIDGFCKIGSLS 566
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
A + M+ + Y SLI+G++
Sbjct: 567 KAVHLMNEMVDKGMSLDKVVYTSLIDGHM 595
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 181/419 (43%), Gaps = 21/419 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN++ N ++ C + V +A + M +G P+ ++ L Y G E++
Sbjct: 197 PNVFTFNIVIDFLCKQGELV-EARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVEL 255
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
L S M + G ++ +V Y++LI+ + K G +E A G M++ T
Sbjct: 256 LVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYF------GEMKRLGVMANVVTLST 309
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V F + G V+ L ++ G++ + ++ G D A +LDEM
Sbjct: 310 FVDAFCKEGLVREAMKLF---AQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV 366
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y + CKE + A A ++ + +G++ + Y LI +++ +
Sbjct: 367 HQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSE 426
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A L +M+ + Y T++ GL + + + + L ++ +D + T + +I
Sbjct: 427 RALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKM-DDCGLRPNTVIYTTI 485
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
+ AF KAG+ +A L ++ +PN TY +LI+G A + + + ++ R++
Sbjct: 486 MDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKM-RELG 544
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKK 634
D ++ L+D F K G + ++ + + + +DK Y + ++ H K
Sbjct: 545 LD--PNVQVYTTLIDGF----CKIGSLSKAVHLMNEMVDKGMSLDKVVY-TSLIDGHMK 596
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 127/339 (37%), Gaps = 48/339 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ ++G C V+ A+ V+ M GV+ NE + L + + + E+ ++
Sbjct: 372 PNVVTYTVMVDGLCKE-GKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALD 430
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCE 335
L + M G + Y +LI G K+ L+ A + M+ T Y
Sbjct: 431 LLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLL------HKMDDCGLRPNTVIYTT 484
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ F + G L+ K+ SG+ + +I G +A S D+M
Sbjct: 485 IMDAFFKAGKESEAVALL---HKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMR 541
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + VY + +CK ++A L+ ++ G+ LD Y +LI+ + D Q
Sbjct: 542 ELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQ 601
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
AF+L M E TGL ++ + +
Sbjct: 602 GAFALKAKMIE--------------TGL----------------------QLDLYCYTCF 625
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
I FC +++A+ L MI P+ Y LI Y
Sbjct: 626 ISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKY 664
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/475 (19%), Positives = 189/475 (39%), Gaps = 32/475 (6%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
+EA + F + +FP N L+ + L ++KR F ++ + P + T
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGAR-PTVF---T 264
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD----ICRKNSNFVAFLKV 200
+ ++ M A L + M K R +P + ++D + R + F ++
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
+ CC +P++ NA L C + + M G++PN S+
Sbjct: 324 KDMCC-----------EPDVITYNA-LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L + +G+ ++ ++ M G Y+SLI K+GNL A R G
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL------G 425
Query: 321 GNMEQS--DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
M Q +++ TY ++ G +K L K++ +G++ + + +I
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF---GKMDTAGVIPNLASYNALIHGF 482
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
V D+A +L+E+ G L +Y + C + A ++ ++ G++ +
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
Y L++A S + L +M+E I ++ ++ GL +N + +
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ D ++ + ++I CK ++E A +M+ P+ Y SL++G
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 149/364 (40%), Gaps = 20/364 (5%)
Query: 258 SFGFLAYLYALK---GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
FG L+++ G+ E+ ++ S M F + + L+ + KLG + R
Sbjct: 191 GFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF 250
Query: 315 LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
+G G + TY ++ + G+V+ L ++++ G+V D +
Sbjct: 251 KDMIGAGARP----TVFTYNIMIDCMCKEGDVEAARGLF---EEMKFRGLVPDTVTYNSM 303
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
I +G D +EM C + Y + +CK + + ++ +GL
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+ +V +Y L++A Q A + DMR + + +Y +++ L A
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA--NCKIGNLSDA 421
Query: 495 F-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
F L + VE + ++I C A R+++A+ +M PN +Y +LI+G
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
+V A+ L + +E+K +GIK + L F++ L +A V+ + +
Sbjct: 482 FVKAKNMDRALELLNELK-------GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 614 EMKV 617
E +
Sbjct: 535 ECGI 538
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 199/498 (39%), Gaps = 45/498 (9%)
Query: 71 LETNLHKSLLTNNTD--EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFAS 128
LET L N+ EA F S +L PS N L+ +L + N AF S
Sbjct: 40 LETQLRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLV---DALARSRNYGLAF-S 95
Query: 129 VVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDIC 188
V + L F ++ L+ +A F +V + K + + + L +C
Sbjct: 96 VYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLC 155
Query: 189 RKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMS 248
R F A + + E R ++ P+I + N + G C + + +A ++ M
Sbjct: 156 RNGGVFEA-MGLIREMGRKSVS-------PDIVSYNTLINGLCKA-KKLKEAVGLLLEME 206
Query: 249 VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLE 308
G PN + L G ++ +EL M + GF + +V Y +LISG+ GNL+
Sbjct: 207 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 266
Query: 309 SASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR 368
LG G + TY +V G + G K AN ++ A + GI D
Sbjct: 267 RGKELFDEMLGKG----ISANVVTYSCLVHGLCRLGQWKE-ANTVLNA--MAEHGIHPDV 319
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
G+I G + A +L+ M G Y L CKE +A +++
Sbjct: 320 VTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRM 379
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM------REARIYDLKGSYLTIMTG 482
+ G + DV Y+ L++ A LF M E ++ ++ ++ G
Sbjct: 380 MIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVF----TFNMLIGG 435
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHD------WNSIIHAFCKAGRLEDAKRTLRRMI 536
L + R L + V+ R VK +N ++ KAG++++A ++++
Sbjct: 436 LCKEGR-------LTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVL 488
Query: 537 FLQFEPNDQTYLSLINGY 554
L F PN TY LI+G+
Sbjct: 489 DLGFVPNSFTYSILIDGF 506
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 120/548 (21%), Positives = 216/548 (39%), Gaps = 65/548 (11%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTV 145
EA + + S+ P N+LI L + LK A ++ +E + T
Sbjct: 162 EAMGLIREMGRKSVSPDIVSYNTLINGLCKAK---KLKEA-VGLLLEMEAAGCFPNSVTC 217
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECC 205
TL+ + A L++ M K + L+G + C N N ++F+E
Sbjct: 218 TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCN-NGNLDRGKELFDEML 276
Query: 206 RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
+ N+ Y+C + G C L +A V+ M+ G+ P+ ++ L
Sbjct: 277 GKGISANV-----VTYSC--LVHGLCR-LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 328
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
G ++L +LM E G V Y+ L+SG K G + A + + + + G ++
Sbjct: 329 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG--KK 386
Query: 326 SDFSKETYCEVVKGFLQNGNV----KGLANLIIEAQKLEPSGIVVDRSVGFGII------ 375
+D TY ++KG G V K ++ LEP+ + +G G+
Sbjct: 387 ADVV--TYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIG-GLCKEGRLT 443
Query: 376 ------------SACVNL-------GLSDKAHSILDEMNACGCSVGLGVYVPT------- 409
+C NL G KA I + M + LG +VP
Sbjct: 444 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG-FVPNSFTYSIL 502
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ +CK A L ++ + GL + +Y+ L+ + + A SLF++M A
Sbjct: 503 IDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANC 562
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDWNSIIHAFCKAGRLEDA 528
S+ T++ G ++ + + ++VE R + T ++++I+ K G L++A
Sbjct: 563 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALT--FSTLINRLSKLGELDEA 620
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
K L RM+ F P+ Y SL+ G + ++ + H++ KG + +
Sbjct: 621 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM-------AAKGTVLDRKI 673
Query: 589 VDAFLYAL 596
V L L
Sbjct: 674 VSTILTCL 681
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 175/398 (43%), Gaps = 24/398 (6%)
Query: 229 GCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKIVELESLMNEFG 286
G C GL V +A ++++ M G P+ ++GFL L+GL + E +++
Sbjct: 256 GLC-GLGRVREAARLVDRMMTQGCMPSVVTYGFL-----LQGLCRTRQADEACAMLGRLP 309
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV 346
+V +++I G + G L A T L + G D TY ++ G + G
Sbjct: 310 -EVNVVMLNTVIRGCLTEGKLARA--TELYEMMGSKGCPPDV--HTYSILMHGLCKLGRF 364
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
++ E ++ + +V S S C N G+ D A ++LD+M A G S+ Y
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLH--SFCRN-GMWDDARAMLDQMLAKGFSMNSQGY 421
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ A CK+ + +AT+LV ++ S G + D+ Y+ +I + + A +FR++ E
Sbjct: 422 NGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIE 481
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
+ +Y T++ L+ N R + E++ ++ +N +I A CK G ++
Sbjct: 482 EGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHG-CQLDVISYNGLIKALCKEGNVD 540
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEH 586
+ L M+ +PN+ +Y LIN A + L E+ +++ G +
Sbjct: 541 RSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDAL----ELSKEMLNQGLTPDIVTY 596
Query: 587 NLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
N + L K G+ A + ++EK V D Y
Sbjct: 597 N---TLINGLCKVGWTHAALNLLEKLPNENVHPDIVTY 631
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 102/254 (40%), Gaps = 15/254 (5%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G V D + +I A V G +A +LDEM GC+ + + + C R EA
Sbjct: 207 GCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREA 266
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+LV + + G V Y L++ ++ A ++ + E + L T++ G
Sbjct: 267 ARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLN----TVIRG 322
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
+ + A L E++ H ++ ++H CK GR A R L M P
Sbjct: 323 CLTEGKLA-RATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAP 381
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFF 602
N TY +L++ + MW + + + KG + +YAL K G
Sbjct: 382 NIVTYSTLLHSFCRNG-------MWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKL 434
Query: 603 DAVMQVVEKSQEMK 616
D ++V QEMK
Sbjct: 435 DQATRLV---QEMK 445
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 142/347 (40%), Gaps = 27/347 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ + + G C L A ++++ M G PN ++ L + + G+ +
Sbjct: 346 PDVHTYSILMHGLCK-LGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARA 404
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M GFS Y+ +I K G L+ A+R + +S K C
Sbjct: 405 MLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLV-------QEMKSQGCKPDICTY- 456
Query: 338 KGFLQNGNVKGLAN--LIIEAQ----KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
N + L N L+ EA+ L G+V + +I A + G + +
Sbjct: 457 -----NTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLA 511
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
EM GC + + Y +KA CKE + L+ ++ + G++ + +Y+ LI +
Sbjct: 512 SEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKA 571
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME---NHRPELMAAFLDEVVEDPRVEVK 508
+ A L ++M + +Y T++ GL + H A L E + + V
Sbjct: 572 GKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH----AALNLLEKLPNENVHPD 627
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+N +I CK L+DA L + I PN++T+ ++ +V
Sbjct: 628 IVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFV 674
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 94/250 (37%), Gaps = 35/250 (14%)
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y V+ + G V A L+ E + G D + ++ LG +A ++D
Sbjct: 215 YQTVIHALVAQGGVAEAAMLLDEMLLM---GCAADVNTFNDLVLGLCGLGRVREAARLVD 271
Query: 393 EMNACGCSVGLGVYVPTLKAYCK-------------------------------EHRTAE 421
M GC + Y L+ C+ E + A
Sbjct: 272 RMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLAR 331
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
AT+L + S G DV Y L+ F SA + +M E +Y T++
Sbjct: 332 ATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLH 391
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
N + A LD+++ + + +N II+A CK G+L+ A R ++ M +
Sbjct: 392 SFCRNGMWDDARAMLDQMLAKG-FSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCK 450
Query: 542 PNDQTYLSLI 551
P+ TY ++I
Sbjct: 451 PDICTYNTMI 460
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 145/349 (41%), Gaps = 45/349 (12%)
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
SFG + G K L +++ EFG S +V Y++LI G K GN+ A L C
Sbjct: 160 SFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKN--LFC 217
Query: 318 LGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII 375
M++ + TY ++ GF + G + + + ++ SGIV + +I
Sbjct: 218 ----KMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMY---ENMKRSGIVPNAYAYNCLI 270
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
S N G+ DKA + EM G + G+ Y + C+ + EA +LV ++ GL
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL------------ 483
++ Y+ LI +A LF ++ + + +Y T++ G
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390
Query: 484 ---MENH--RPE------LMAAF-----------LDEVVEDPRVEVKTHDWNSIIHAFCK 521
ME P L+ AF + ++E + + ++ +IH C
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCV 450
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
G +++A + + + + +PN Y ++I+GY + L + +E+
Sbjct: 451 HGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEM 499
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 141/339 (41%), Gaps = 15/339 (4%)
Query: 216 MKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+ PN+ ++GCC YG +V A+ + M LG+ PN ++ L + +GLQ +
Sbjct: 189 LSPNVVIYTTLIDGCCKYG--NVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQRE 246
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS--KET 332
++ M G Y+ LIS Y G ++ A + M + + T
Sbjct: 247 GFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVF------AEMREKGIACGVMT 300
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++ G + L+ + K+ S +V ++ +I+ ++G D A + +
Sbjct: 301 YNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI---LINGFCDVGKMDTAVRLFN 357
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
++ + G S L Y + Y K A A LV ++ + Y LI+A
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A + M ++ + +Y ++ GL H A+ L + + + ++ + +
Sbjct: 418 YTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCV-HGNMKEASKLFKSLGEMHLQPNSVIY 476
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
N++IH +CK G A R L M+ PN ++ S I
Sbjct: 477 NTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTI 515
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 113/288 (39%), Gaps = 22/288 (7%)
Query: 336 VVKGFLQNGN-VKGLANL-IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++KG + G VKG L ++E L P+ ++ +I C G A ++ +
Sbjct: 164 MIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTT-----LIDGCCKYGNVMLAKNLFCK 218
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M+ G Y + + K+ E Q+ ++ SG+ + Y+ LI
Sbjct: 219 MDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGM 278
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
AF +F +MRE I +Y ++ GL + A L V + +N
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFG-EAVKLVHKVNKVGLSPNIVTYN 337
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+I+ FC G+++ A R ++ P TY +LI GY E L + E++ +
Sbjct: 338 ILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
+ L+DAF A + EK+ EM ++K
Sbjct: 398 CIAPSKVTYTI---LIDAF-----------ARLNYTEKACEMHSLMEK 431
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 15/213 (7%)
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
+Y + AY H T +A + + G ++ L+ I S F A+ +F ++
Sbjct: 91 LYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL 150
Query: 465 REARIYDLKGSYLTIMTGLMENH---RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
+ + D S+ ++ G E + + A L+E P V + + ++I CK
Sbjct: 151 KSKVVLDAY-SFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVI----YTTLIDGCCK 205
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKG 581
G + AK +M L PN TY L+NG+ M+ +KR G
Sbjct: 206 YGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKR-------SG 258
Query: 582 IKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
I + + GG D +V + +E
Sbjct: 259 IVPNAYAYNCLISEYCNGGMVDKAFKVFAEMRE 291
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 42/208 (20%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
+++++ A +++ M + P++ ++ L +A EK E+ SLM + G +
Sbjct: 381 VENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYT 440
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
YS LI G GN++ AS+ K L +
Sbjct: 441 YSVLIHGLCVHGNMKEASKLF--------------------------------KSLGEM- 467
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
L+P+ ++ + +I G S +A +L+EM G + + T+
Sbjct: 468 ----HLQPNSVIYNT-----MIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLL 518
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNY 441
C++ + EA L+ + +SGL+ V Y
Sbjct: 519 CRDEKWKEAELLLGQMINSGLKPSVSLY 546
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 140/339 (41%), Gaps = 13/339 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P IY N + G C V +A V + + G+RP SF L G E+
Sbjct: 246 PKIYFFNVLMHGFCKA-GDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFR 304
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L+ +M G + +S+LI+G K G L+ S G G + T+ ++
Sbjct: 305 LKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNG----VTFTTLI 360
Query: 338 KGFLQNGNVK-GLANL-IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
G + G V L N ++ AQ + P + + +I+ +G +A +++EM
Sbjct: 361 DGQCKGGKVDLALKNFQMMLAQGVRPDLVTYN-----ALINGLCKVGDLKEARRLVNEMT 415
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A G + + CK+ A ++ + G++LD + ALI
Sbjct: 416 ASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVH 475
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A + DM A +Y ++ + ++ L E+ D V +N++
Sbjct: 476 DAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVP-GVVTYNAL 534
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++ CK G++++AK L M+ + PND TY L++G+
Sbjct: 535 MNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGH 573
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 176/400 (44%), Gaps = 24/400 (6%)
Query: 227 LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG 286
+ G C GL V +A ++++ M G P ++GFL L+GL ++ + + G
Sbjct: 236 VRGMC-GLGRVREAARLVDRMMTKGCMPGVMTYGFL-----LQGLC-RVRQADEARAMLG 288
Query: 287 FSSQM--VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNG 344
++ V ++++I G + G L A+ + +G ++ TY ++ G + G
Sbjct: 289 RVPELNVVLFNTVIGGCLAEGKLAEATE-LYETMG---LKGCQPDAHTYSILMHGLCKLG 344
Query: 345 NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
+ L+ E +K + VV ++ + S C N G+ D ++L+EM+A G ++
Sbjct: 345 RIGSAVRLLREMEKKGFAPNVVTYTIV--LHSFCKN-GMWDDTRALLEEMSAKGLTLNSQ 401
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y + A CK+ R EA L+ ++ S G D+ +Y+ +I ++ + A +F ++
Sbjct: 402 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 461
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
E + +Y TI+ L+ + R + E++ + +N +I A CK G
Sbjct: 462 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILH-GCSLDVVSYNGLIKAMCKDGN 520
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF 584
++ + L M +PN+ +Y LI+ + L E+ +++ G
Sbjct: 521 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL----ELSKQMLNQGLAPDIV 576
Query: 585 EHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+N + L K G+ A + ++EK V D Y
Sbjct: 577 TYN---TLINGLCKMGWMHAALNLLEKLHNENVHPDIITY 613
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 17/255 (6%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G V D + +I A + G +A ++L+EM GC+ + + ++ C R EA
Sbjct: 189 GCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREA 248
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+LV + + G V Y L++ + A ++ + E + + T++ G
Sbjct: 249 ARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV----LFNTVIGG 304
Query: 483 -LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
L E E A L E + + H ++ ++H CK GR+ A R LR M F
Sbjct: 305 CLAEGKLAE--ATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFA 362
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
PN TY +++ + MW + + + KG+ + +YAL K G
Sbjct: 363 PNVVTYTIVLHSFCKNG-------MWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR 415
Query: 602 FDAVMQVVEKSQEMK 616
D M ++ QEM+
Sbjct: 416 MDEAMGLI---QEMR 427
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 146/340 (42%), Gaps = 14/340 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++Y C+ + C + V A +V+E M G+ PN ++ L Y +G E +
Sbjct: 224 PDVYMCSIVVNAHCQ-VGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVER 282
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF---SKETYC 334
+ LM+E G S +V + L+ GY K G ++ A + + +E+ + + Y
Sbjct: 283 VLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLL------REVEEDELLVVDERVYG 336
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+V G+ Q G ++ + E ++ G+ V+ + +I LG +A + M
Sbjct: 337 VLVDGYCQMGRMEDAVRIRDEMLRV---GLKVNMVICNTLIKGYCKLGQVCEAERVFVGM 393
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
Y L YC+E + ++A L ++ G+ V Y+ +I+ + +
Sbjct: 394 VDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSY 453
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A L+ M E + + S T++ + + E++ + T +N+
Sbjct: 454 DDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTK-STVAFNT 512
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+I CK G+L +A RM L P++ TY +L +GY
Sbjct: 513 MISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGY 552
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 168/439 (38%), Gaps = 80/439 (18%)
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
G LVD + +++ +E R+ L K N+ CN ++G C L V +AE
Sbjct: 336 GVLVDGYCQMGRMEDAVRIRDEMLRVGL-------KVNMVICNTLIKGYC-KLGQVCEAE 387
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
+V M ++P+ S+ L Y +G K L M G + +V Y+++I G
Sbjct: 388 RVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGL 447
Query: 302 VKLGNLESASRTILLCLGGG----------------NMEQSDFSKETYCEVV-KGFLQ-- 342
V +G+ + A L + G M SD + + E++ +GF +
Sbjct: 448 VDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKST 507
Query: 343 ---NGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII-----------SACVNLGLSDKAH 388
N + GL + KL +G V DR G+ C N G +A
Sbjct: 508 VAFNTMISGLCKM----GKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKN-GNVQEAF 562
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
I M S + +Y + K + + T L++++ + GL +V Y LI
Sbjct: 563 QIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGW 622
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE------- 501
Q AF L+ +M E I++ L + R LD++++
Sbjct: 623 CDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVH 682
Query: 502 ----------DPRVEV-KTHD----------------WNSIIHAFCKAGRLEDAKRTLRR 534
D +E K D +N I CK+G+L++A+ L
Sbjct: 683 NKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSV 742
Query: 535 MIFLQFEPNDQTYLSLING 553
++ F P++ TY +LI+
Sbjct: 743 LMSRGFLPDNFTYCTLIHA 761
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 148/368 (40%), Gaps = 66/368 (17%)
Query: 215 FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
F K + A N + G C + + +A V + M LG+ P+E ++ L+ Y G ++
Sbjct: 503 FTKSTV-AFNTMISGLC-KMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQE 560
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL----------------LCL 318
+++ +M S+ + Y+SLI G K+ L + ++ L
Sbjct: 561 AFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLIS 620
Query: 319 GGGNMEQSDFSKETYCEVV-KGFLQNGNV-KGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
G + ++ D + Y E++ +GF N V + + + ++ + +++D+ + F I++
Sbjct: 621 GWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILA 680
Query: 377 A---C----VNLGLSDKAHSI---LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
C V L+ +A I LD+ + C VY + CK + EA ++
Sbjct: 681 VHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVL 740
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ S G D Y LI A S + AF L +M E GL+
Sbjct: 741 SVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEK--------------GLI-- 784
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
P + + +N++I+ CK G ++ A+R ++ PN T
Sbjct: 785 ----------------PNITI----YNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVT 824
Query: 547 YLSLINGY 554
Y LI Y
Sbjct: 825 YNILIGCY 832
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 7/207 (3%)
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
RS F ++ V G A + D++ G + + + A+C+ R A +++
Sbjct: 192 RSCSF-LLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLE 250
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ GL+ +V Y+ L+ + DF+ + R M E + + +M G +
Sbjct: 251 KMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKG 310
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+ + L EV ED + V + ++ +C+ GR+EDA R M+ + + N
Sbjct: 311 KMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVIC 370
Query: 548 LSLINGYVT------AEQYFSVLMMWH 568
+LI GY AE+ F ++ W+
Sbjct: 371 NTLIKGYCKLGQVCEAERVFVGMVDWN 397
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 156/361 (43%), Gaps = 16/361 (4%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++Y + + G C G ++ A +V + M+ GV P+ + + Y G E+ +EL
Sbjct: 289 DLYTYSTLIHGLC-GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLEL 347
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEV 336
+M + G + +V Y+ LI G + ++ A L + + D + TY +
Sbjct: 348 WKVMEKEGCRT-VVSYNILIRGLFENAKVDEAISIWEL------LPEKDCCADSMTYGVL 400
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V G +NG + +++ EA+ +D +I+ G D+ +LD+M
Sbjct: 401 VHGLCKNGYLNKALSILEEAENGRGD---LDTFAYSSMINGLCREGRLDEVAGVLDQMTK 457
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
GC V + + + + +A + ++ S G V Y+ LI ++ F
Sbjct: 458 HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSE 517
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKTHDWNSI 515
A++L ++M +Y +M GL + + ++ + +E + +VK H N I
Sbjct: 518 AYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH--NII 575
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
IH C +G++EDA + M + PN T+ +L+ G+ + +W I + S
Sbjct: 576 IHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWS 635
Query: 576 T 576
+
Sbjct: 636 S 636
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 142/356 (39%), Gaps = 43/356 (12%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+AE +G+ PN ++ L + K +K EL + M E GFS + Y +LI
Sbjct: 132 EAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLI 191
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE--VVKGFLQNGNVKGLANL---I 353
+ K G + A + M + + + C ++ GF + G++ + + +
Sbjct: 192 NSLAKNGYMSDALKLF------DEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL 245
Query: 354 IEAQKLEPS----GIVVDRSVGFG--------------------------IISACVNLGL 383
++ + P+ ++++ G +I G
Sbjct: 246 LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 305
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
D A + EM G S + VY L Y + R E +L + G + V +Y+
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNI 364
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI + A S++ + E +Y ++ GL +N + L+E E+
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE-AENG 423
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
R ++ T ++S+I+ C+ GRL++ L +M +PN ++ING+V A +
Sbjct: 424 RGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASK 479
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 154/390 (39%), Gaps = 38/390 (9%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ N ++ C Q A++++ M G P+ S+G L A G
Sbjct: 145 LSPNLQTYNILIKISCRKKQ-FDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN------------- 322
++L M E G + + Y+ LI G+ K G++ +AS L G +
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263
Query: 323 -----------------MEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
M++++ ++ TY ++ G +GN+ G + E + +G
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKE---MAENG 320
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+ D V +++ + G ++ + M GC + Y ++ + + EA
Sbjct: 321 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRGLFENAKVDEAI 379
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+ + D Y L+ + A S+ + R +Y +++ GL
Sbjct: 380 SIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGL 439
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
R + +A LD++ + + H N++I+ F +A +LEDA R M+ P
Sbjct: 440 CREGRLDEVAGVLDQMTKH-GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 498
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
TY +LING AE++ + E+ K
Sbjct: 499 VVTYNTLINGLSKAERFSEAYALVKEMLHK 528
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 71/169 (42%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A S G S L Y +K C++ + +A +L+ + G DV +Y L
Sbjct: 131 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTL 190
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I + + A LF +M E + Y ++ G + + + +++ P
Sbjct: 191 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
V +N +I+ CK G+ +++ RM + + TY +LI+G
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHG 299
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 154/391 (39%), Gaps = 44/391 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ A NA L S+ A + + +M GV PN ++ L +G E+ V
Sbjct: 116 PSVPAYNAVLLA--LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVG 173
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M G + V Y++L++ + + G L+ A R + L GN + + T+ +V
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLV---TFNSMV 230
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + G ++G + E + G+ D ++S +G ++ ++ EM
Sbjct: 231 NGLCKAGRMEGARKVFDEMVR---EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR 287
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + + + A CK +A LV + GL+++ + ALI+ A
Sbjct: 288 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA 347
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+MR+ I Y ++ G + R +L + E+ E RV+ +++II
Sbjct: 348 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM-EAKRVKPDVVTYSTIIS 406
Query: 518 AFCKAG-----------------------------------RLEDAKRTLRRMIFLQFEP 542
+CK G RL DA M+ L +P
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++ TY +LI+G+ L + E+ RK
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 497
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 147/359 (40%), Gaps = 18/359 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG-VRPNESSFGFLAYLYALKGLQEKIV 276
PN N + C + + AE+V+ M G +PN +F + G E
Sbjct: 185 PNAVTYNTLVAAFCRAGE-LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 243
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
++ M G + +V Y++L+SGY K+G L + M Q + T+
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF------SEMTQRGLVPDVVTFT 297
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ + GN++ L+ + ++ G+ ++ +I G D A ++EM
Sbjct: 298 SLIHATCKAGNLEQAVALVAQMRE---RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
CG + Y + YCK R A +L+ ++ + ++ DV Y +I +
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
SAF L + M + + +Y +++ GL E R + +++ V+ + +
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ-LGVQPDEFTYTT 473
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV----TAEQYFSVLMMWHE 569
+I CK G +E A MI P+ TY LING T E + + ++HE
Sbjct: 474 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHE 532
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 160/374 (42%), Gaps = 37/374 (9%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
KVF+E R + + P++ + N L G C + + ++ V M+ G+ P+ +
Sbjct: 244 KVFDEMVR-------EGLAPDVVSYNTLLSGYC-KVGCLHESLAVFSEMTQRGLVPDVVT 295
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
F L + G E+ V L + M E G V +++LI G+ K G L+ A L
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA------LL 349
Query: 319 GGGNMEQSDFSKETYC--EVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGI 374
M + C ++ G+ + G + LI +EA++++P VV S I
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD--VVTYST---I 404
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
IS +G D A + +M G Y ++ C+E R +A +L ++ G+
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
Q D Y LI+ + + A SL +M + +Y ++ GL ++ R +
Sbjct: 465 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 524
Query: 495 FLDEVV-EDPRVEVKTHD----------WNSII---HAFCKAGRLEDAKRTLRRMIFLQF 540
L ++ EDP + +D + S++ FC G +++A + + M+ +
Sbjct: 525 LLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW 584
Query: 541 EPNDQTYLSLINGY 554
+ + Y LI+G+
Sbjct: 585 KLDGSVYSILIHGH 598
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 94/462 (20%), Positives = 171/462 (37%), Gaps = 45/462 (9%)
Query: 59 QQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQD 118
+++ + N+ + + ++ + A K F + L P N+L++ +
Sbjct: 214 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGC 273
Query: 119 NHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFE 178
H F+ + + + D T +L+ + A A ALV M + M
Sbjct: 274 LHESLAVFSEMT----QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329
Query: 179 LWGGFLVDICRKNSNFVAFLKVFE-ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSV 237
+ + C+K A L V E C I +P++ NA + G C L +
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGI---------QPSVVCYNALINGYC-KLGRM 379
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
A ++I M V+P+ ++ + Y G + +L M + G + YSSL
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 439
Query: 298 ISGYVKLGNLESASRTI--LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
I G + L A +L LG ++ +F TY ++ G + GNV+ +L E
Sbjct: 440 IRGLCEEKRLNDACELFENMLQLG---VQPDEF---TYTTLIDGHCKEGNVEKALSLHDE 493
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL---------------DEMNACGCS 400
+ G++ D +I+ + +AH +L D + C
Sbjct: 494 MIR---KGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK 550
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
V LK +C + EA ++ + +LD Y LI + + A S
Sbjct: 551 AEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSF 610
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
+ M + S ++++ GL E E M D ++D
Sbjct: 611 HKQMLRSGFSPNSTSTISLVRGLFE----EGMVVEADNAIQD 648
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 175/448 (39%), Gaps = 61/448 (13%)
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG 233
F+P E LVD RK N + + + + + P+++ NA + C
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV-------APSLFVYNALINSMCKD 368
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
+ +AE + M G+ PN+ ++ L + +G + + M E G + +
Sbjct: 369 -GKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYP 427
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
YSSLISG+ KLG L +A + G Y ++ G+ + G L N
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNV----VIYTSLISGYCKEGE---LHNAF 480
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
++ GI + +IS + +A+ + EM Y ++ +
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR--EARIYD 471
CKE T A +L+ ++ GL D Y LI ++ A D++ + ++ +
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600
Query: 472 LKGSYLTIMT-----------GLMENHRPELM----------------AAFLDEVVEDPR 504
++G ++T GLM+ + EL+ A FLD + +
Sbjct: 601 IEGCLPNVVTYTALINGLCKIGLMD--KAELLCREMLASNSLPNQNTYACFLDYLTSEGN 658
Query: 505 VE--VKTHD------------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+E ++ HD +N +I FCK GR+++A L MI P+ +Y ++
Sbjct: 659 IEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTI 718
Query: 551 INGYVTAEQYFSVLMMWHE-IKRKISTD 577
I Y + +W + R ++ D
Sbjct: 719 IYEYCRRGDLKEAIKLWESMLNRGVNPD 746
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 136/322 (42%), Gaps = 16/322 (4%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
E+++ M G P+E++ L KG +L + + +FG + + Y++LI+
Sbjct: 304 GEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALIN 363
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
K G L+ A ++ +G + +D TY ++ F + G + + + K+
Sbjct: 364 SMCKDGKLDEA-ESLFNNMGHKGLFPNDV---TYSILIDSFCKRGKLDVALHFL---GKM 416
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
GI +IS LG A S+ DEM A G + +Y + YCKE
Sbjct: 417 TEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGEL 476
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A +L +++ G+ + + ALI + A LF +M E + + +Y +
Sbjct: 477 HNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL 536
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ G + LDE+VE V T+ + +I C GR+ +A+ + + Q
Sbjct: 537 IEGHCKEGNTVRAFELLDEMVEKGLVP-DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQ 595
Query: 540 FE--------PNDQTYLSLING 553
+ PN TY +LING
Sbjct: 596 QKLNEIEGCLPNVVTYTALING 617
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
SG+ D V ++ + L +A ++ M + GC + + Y ++ CK R E
Sbjct: 209 SGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWE 268
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A ++ +S GL+ DVG Y L+ ++F++ + +M E + + ++
Sbjct: 269 AVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVD 328
Query: 482 GLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL + + + +AF L V+ V +N++I++ CK G+L++A+ M
Sbjct: 329 GLRK--KGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGL 386
Query: 541 EPNDQTYLSLINGY 554
PND TY LI+ +
Sbjct: 387 FPNDVTYSILIDSF 400
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 132/360 (36%), Gaps = 47/360 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN Y A + G C+ +++A K+ M V PNE ++ L + +G +
Sbjct: 491 ISPNTYTFTALISGLCHA-NRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRA 549
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
EL M E G Y LISG LC G E +F
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISG---------------LCSTGRVSEAREF------- 587
Query: 336 VVKGFLQNGNVKGLANLIIEAQKL-EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+ +L E QKL E G + + +I+ +GL DKA + EM
Sbjct: 588 -------------MNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREM 634
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
A Y L E +A QL D+ G + Y+ LI
Sbjct: 635 LASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRI 693
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWN 513
Q A + +M ++ I SY TI+ R +L A L E + + V T +N
Sbjct: 694 QEAAEVLVNMIDSGISPDCISYSTIIYEYCR--RGDLKEAIKLWESMLNRGVNPDTVAYN 751
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV------TAEQYFSVLMMW 567
+I+ C G L A M+ +PN TY SLI+G + YFS + W
Sbjct: 752 FLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFSCKLNW 811
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 143/369 (38%), Gaps = 68/369 (18%)
Query: 91 FKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVV-YVIEKNPKLLDFQTVHTLL 149
F + AN L P+ + SLI+ + HN R + + I N T L+
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT-----YTFTALI 502
Query: 150 GSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE------ 203
+ +AN A A L M + +P E+ L++ K N V ++ +E
Sbjct: 503 SGLCHANRMAEANKLFGEMVEWN-VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561
Query: 204 --------------CCRIALDENLDFMK----------------PNIYACNAALEGCC-Y 232
C + E +FM PN+ A + G C
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKI 621
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELESLMNEFGFSSQM 291
GL + AE + M PN++++ FL YL + +G EK ++L ++ E GF +
Sbjct: 622 GL--MDKAELLCREMLASNSLPNQNTYACFLDYLTS-EGNIEKAIQLHDVLLE-GFLANT 677
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGL 349
V Y+ LI G+ KLG ++ A+ ++ NM S S + +Y ++ + + G++K
Sbjct: 678 VTYNILIRGFCKLGRIQEAAEVLV------NMIDSGISPDCISYSTIIYEYCRRGDLK-- 729
Query: 350 ANLIIEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
EA KL S G+ D +I C G KA + D+M G
Sbjct: 730 -----EAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRAT 784
Query: 406 YVPTLKAYC 414
Y + C
Sbjct: 785 YNSLIHGTC 793
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 150/346 (43%), Gaps = 11/346 (3%)
Query: 216 MKPNIYACNAALEG-CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
M P++ + + + G CC G ++ + + M GV+P+ +F L +G +
Sbjct: 268 MIPDVISYSTLIHGFCCAG--KWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTE 325
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+L +M + G ++ Y+SLI G+ +G+L SA R + L + +E + S Y
Sbjct: 326 AKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSA-RELFLSMPSKGLEPDEIS---YT 381
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G+ + VK NL E ++ S V ++ G A + M
Sbjct: 382 TLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGT---LLKGLFQKGKVGDAKKLFGVM 438
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G S +Y L CK EA +L ++ S +L++ NY LI+ +
Sbjct: 439 KTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKL 498
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
++A+ LF + + + +Y ++ G + + + A L E +E+ +N+
Sbjct: 499 ETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVD-NANILFEKMEENGCTPDIIAYNT 557
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
++ FC+ +LE+ + L +M+ PN + +++ E+Y
Sbjct: 558 LLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKY 603
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 109/520 (20%), Positives = 205/520 (39%), Gaps = 47/520 (9%)
Query: 146 HTLLGSMRNANT----AAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
H L +RN T A AF M ++ P + L + + N ++ ++
Sbjct: 56 HPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKIN-HYSQLFSLY 114
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
E L + P+++ + L C + VS+A + + G PN
Sbjct: 115 NE-------MRLAGLSPDLFTL-SILANCLCNVNRVSEALAAMAGILRRGYIPN-----V 161
Query: 262 LAYLYALKGL--QEKIVELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
+ Y +KGL + +I E L M + G + V Y +LI G + GN+ A +
Sbjct: 162 VTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKE 221
Query: 317 CLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
L + + TY ++ G + G L ++++ G++ D +
Sbjct: 222 MLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELF---EEMKAQGMIPDVISYSTL 278
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
I G D++ + DEM G + + + CKE + EA +L+ + G+
Sbjct: 279 IHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGI 338
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
++ Y++LI+ D SA LF M + + SY T++ G + + +
Sbjct: 339 VPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMN 398
Query: 495 FLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+E+++ P V + +++ + G++ DAK+ M N Q Y +
Sbjct: 399 LYNEMLQVGKSPNVTT----YGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454
Query: 552 NGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
+G + F + +++E+K S + + I+ L+D L K G + ++ EK
Sbjct: 455 DGLCKNDCLFEAMELFNELK---SYNFKLNIENYSCLID----GLCKAGKLETAWELFEK 507
Query: 612 SQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRN--FKKME 649
+ + D Y H KV ++ N F+KME
Sbjct: 508 LSQEGLQPDVVTYNIMI---HGFCKVGQVDNANILFEKME 544
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 184/448 (41%), Gaps = 92/448 (20%)
Query: 173 YFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCY 232
+F+P F+VD RK + K F C + L M PN++ACNA ++ C
Sbjct: 295 HFVPSVASCSFMVDGLRKRGHID---KAFRLACHLG---ELG-MVPNLFACNALIDKLCK 347
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV 292
+ +AE++ M+ G+ PNE ++ L + +G+ + + + M E G +
Sbjct: 348 D-RRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVY 406
Query: 293 FYSSLISGYVKLGNLESASRTIL---------------------LCLGGGNMEQSDFSKE 331
Y+SLI+GY + N A R +L LC G + +E
Sbjct: 407 PYNSLINGYCQHDNFHQA-RGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHRE 465
Query: 332 -----------TYCEVVKGFLQNGNVKGLA------------------NLIIEA------ 356
T+ ++ GF ++GN+ A N++IE
Sbjct: 466 MARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGN 525
Query: 357 --------QKLEPSGIVVDRSVGFGIISA-CVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
++ G+ D +IS C+ LG + KA +D++ C V +
Sbjct: 526 VRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLG-AMKAKEFVDDLEN-NCVVLNSFSL 583
Query: 408 PTLK-AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
TL +CKE R E + ++ + G++LD+ ++ ++ A++ D + LFR+M+E
Sbjct: 584 TTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKE 643
Query: 467 ARIYDLKGSYLTIMTGLMENHRPE--LMAAF--LDEVVED---PRVEVKTHDWNSIIHAF 519
+ T +++ H E ++ A D+++ D P V + +I+
Sbjct: 644 KGVKPDN----VFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVT----YTVLINHL 695
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
CK+G L A+ M+ +F PN TY
Sbjct: 696 CKSGYLSSAQILCEEMLVGRFLPNSFTY 723
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 23/330 (6%)
Query: 232 YGL---QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFS 288
YGL V +A +V +M G+ +E ++ L Y + E +E+ M F
Sbjct: 238 YGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFV 297
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLC-LGGGNMEQSDFSKETYCEVV---KGFLQNG 344
+ S ++ G K G+++ A R L C LG M + F+ + + + F +
Sbjct: 298 PSVASCSFMVDGLRKRGHIDKAFR--LACHLGELGMVPNLFACNALIDKLCKDRRFREAE 355
Query: 345 NV-KGLANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVG 402
+ +G+AN + LEP+ V + I I + G+ D A + D M G V
Sbjct: 356 RLFRGMAN-----RGLEPN------EVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVT 404
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+ Y + YC+ +A L+ ++ GL +Y LI D SA L R
Sbjct: 405 VYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHR 464
Query: 463 DMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKA 522
+M + ++ T+++G ++ + A D+++ D V +N +I +C+
Sbjct: 465 EMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMI-DSSVVPNEVTFNVMIEGYCRV 523
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
G + A + +M+ P++ TY SLI+
Sbjct: 524 GNVRKAFQLYDQMVDRGLTPDNYTYRSLIS 553
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 146/377 (38%), Gaps = 25/377 (6%)
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
C+ LDE Y A + C ++++ A ++ M GV+ + + L Y
Sbjct: 189 CKFPLDE---------YVYTAGIRAYCE-IRNLDGARGLLTRMESKGVKGSAVPYNVLMY 238
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
+ VE+++ M E G + V Y +L+ G+ + LE A +M
Sbjct: 239 GLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMT------DDML 292
Query: 325 QSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
F S + +V G + G++ L A L G+V + +I
Sbjct: 293 SLHFVPSVASCSFMVDGLRKRGHIDKAFRL---ACHLGELGMVPNLFACNALIDKLCKDR 349
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+A + M G Y + + CK +A + + G+++ V Y+
Sbjct: 350 RFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYN 409
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVE 501
+LI +F A L +M E + SY ++ GL + +L +A L +
Sbjct: 410 SLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCR--KGDLASAMELHREMA 467
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
V + + ++I FCK G +++A R +MI PN+ T+ +I GY
Sbjct: 468 RNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVR 527
Query: 562 SVLMMWHE-IKRKISTD 577
++ + + R ++ D
Sbjct: 528 KAFQLYDQMVDRGLTPD 544
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 149/405 (36%), Gaps = 40/405 (9%)
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD 239
+ + +CRK + + +++ E R + + N+Y + G C ++ +
Sbjct: 443 YSPLIAGLCRK-GDLASAMELHREMAR-------NGVSGNVYTFTTLISGFCKD-GNMDE 493
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A ++ + M V PNE +F + Y G K +L M + G + Y SLIS
Sbjct: 494 AARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLIS 553
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSK--ETYCEVVK---------GFLQNGNVKG 348
+LCL G M+ +F E C V+ GF + G +
Sbjct: 554 ---------------VLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTE 598
Query: 349 LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
++ E + G+ +D I+ A + L +K + EM G +
Sbjct: 599 TYHIWDE---MRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTC 655
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ + KE +A + + G +V Y LI S SA L +M R
Sbjct: 656 MIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGR 715
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
+Y + L E ++E T +N++I FCKAG+++ A
Sbjct: 716 FLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVT--FNTLIKGFCKAGQIQGA 773
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++ F P+ +Y ++IN +W+E+ K
Sbjct: 774 IDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYK 818
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 87/246 (35%), Gaps = 34/246 (13%)
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
SGI + + I+ A + + A + DEM C + VY ++AYC+
Sbjct: 154 SGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDG 213
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A L+ + S G++ Y+ L+ + A + M E I + +Y T++
Sbjct: 214 ARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVY 273
Query: 482 GLMENHRPELMAAFLDEVVE-----------------------DPRVEVKTH-------- 510
G E+ D+++ D + H
Sbjct: 274 GFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVP 333
Query: 511 ---DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
N++I CK R +A+R R M EPN+ TY LI+ L M+
Sbjct: 334 NLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMF 393
Query: 568 HEIKRK 573
++ K
Sbjct: 394 DRMREK 399
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 76/207 (36%), Gaps = 49/207 (23%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKA-------YCKEHRTAEATQLVMDISSSGL 434
GL + H +D+ C +G VP L A CK+ R EA +L +++ GL
Sbjct: 309 GLRKRGH--IDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGL 366
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+ + Y LI + A +F MRE KG
Sbjct: 367 EPNEVTYAILIHSLCKRGMMDDALCMFDRMRE------KG-------------------- 400
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ V + +NS+I+ +C+ A+ L M+ P+ +Y LI G
Sbjct: 401 ----------IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGL 450
Query: 555 VTAEQYFSVLMMWHEIKRKISTDGQKG 581
S + E+ R+++ +G G
Sbjct: 451 CRKGDLASAM----ELHREMARNGVSG 473
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 154/346 (44%), Gaps = 15/346 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KPN+ N+ + G C + DA KV + M G+ P+ S+ L Y G +
Sbjct: 223 LKPNLVTFNSVVNGICKA-GRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEA 281
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSK--ET 332
+ + + M G +V ++SLI K GNLE A + + G M + F+ +
Sbjct: 282 LSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDG 341
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+C+ KGFL + LA + +++PS + + +I+ +G D+A ++
Sbjct: 342 FCK--KGFLDDAL---LAVREMRQCRIQPSVVCYN-----ALINGYCMVGRMDEARELVR 391
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM A G + Y L AYCK T A QL + +G+ D Y +LI +
Sbjct: 392 EMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEK 451
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
A LF++M + + +Y +++ G + E + DE+V+ V +
Sbjct: 452 RLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVK-AGVLPDVVTY 510
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+ +I+ K+ R ++A+R L ++ + P + Y +L+ AE
Sbjct: 511 SVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAE 556
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 136/337 (40%), Gaps = 44/337 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN N + C + V AE++++ M G++PN +F + G E +
Sbjct: 190 PNAVTYNTLVAAFCRAGE-VDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARK 248
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M + G + V Y++L+ GY K+G A G M T+ ++
Sbjct: 249 VFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDV----VTFTSLI 304
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+ GN++ L+ E ++ G+ ++ +I G D A + EM C
Sbjct: 305 HVMCKAGNLERAVGLVREMRE---RGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQC 361
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
+ Y + YC R EA +LV ++ + G++ DV Y ++ A + D SA
Sbjct: 362 RIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSA 421
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
F L + M E G++ P+ + ++S+I
Sbjct: 422 FQLNQQMLE--------------NGVL----PDAIT------------------YSSLIR 445
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
C+ RL DA + MI L +P++ TY SLI+G+
Sbjct: 446 VLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGH 482
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 20/218 (9%)
Query: 406 YVPTLKAY------CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
Y P++ AY + A + + S G+ +V Y+ L+ A + A S
Sbjct: 119 YAPSVLAYNAVLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 178
Query: 460 LFRDMREARIYDLKGSYLTIMTGLM---ENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
+ RDMR A +Y T++ E R E + + E P + +NS++
Sbjct: 179 VLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVT----FNSVV 234
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+ CKAGR+EDA++ M+ P+ +Y +L+ GY L ++ E+ R
Sbjct: 235 NGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTR---- 290
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
KGI + + ++ + K G + + +V + +E
Sbjct: 291 ---KGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRE 325
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++ A G +A S+L +M GC Y + A+C+ A +LV + G
Sbjct: 163 LVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGG 222
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME---NHRPE 490
L+ ++ +++++ + + A +F +M + + SY T++ G + +H E
Sbjct: 223 LKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSH--E 280
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
++ F + + +V T + S+IH CKAG LE A +R M + N+ T+ +L
Sbjct: 281 ALSVFAEMTRKGIMPDVVT--FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTAL 338
Query: 551 INGYVTAEQYFSVLMMWHEIKR 572
I+G+ L+ E+++
Sbjct: 339 IDGFCKKGFLDDALLAVREMRQ 360
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 157/350 (44%), Gaps = 33/350 (9%)
Query: 234 LQSVSDAEKVIETMSVL-GVR--PNESSFGFLAYLYALKGLQEKIVEL-ESLMNEFGFSS 289
L S+ A K+ + M++ G++ P+ + L + L +K +EL + F
Sbjct: 45 LASLCQAGKMDQAMAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVP 104
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
+ Y+++I Y K+ L+ A + L + SD T V +GF + V
Sbjct: 105 EATTYTAIIKCYCKMDRLDQARQL----LEESSCCSSDVIAIT--SVARGFCKAQRVDEA 158
Query: 350 ANLI---IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
L+ +E + +P IV + G A G +A+ +L+ + + GC Y
Sbjct: 159 YQLLLDMVEKKSAKPD-IVAWNVIIHGFCKA----GRVREAYEMLETLVSMGCVPNAVTY 213
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSG--LQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
+ +CK +EA QL +SS + +V ++ALI + + AF L + M
Sbjct: 214 TTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQM 273
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCK 521
+ + +Y T+M GL + R ++ +E++ + P V + +++HA CK
Sbjct: 274 KARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVT----YTTLVHAHCK 329
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLI-----NGYV-TAEQYFSVLM 565
AG L+DA++ +R M+ P+ TY L+ NG V TA ++F ++
Sbjct: 330 AGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKIL 379
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 102/254 (40%), Gaps = 47/254 (18%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGV-YVPTLKAYCKEHRTAEATQLVMDISSS 432
+I+ L L DKA + EM V Y +K YCK R +A QL+ + SS
Sbjct: 76 LINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SS 133
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
DV ++ +Q A+ L DM E + + +P+++
Sbjct: 134 CCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKK-----------------SAKPDIV 176
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
A WN IIH FCKAGR+ +A L ++ + PN TY +LI+
Sbjct: 177 A------------------WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218
Query: 553 GYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV--DAFLYALVKGGFFDAVMQVVE 610
G+ + L ++ + S D E N+V +A + L K + ++V+
Sbjct: 219 GFCKSGNLSEALQLFKVLS---SRDHHA----EPNVVTFNALISGLCKADRLEHAFELVK 271
Query: 611 KSQEMKVFVDKWKY 624
+ + + D + Y
Sbjct: 272 QMKARDLRADTFTY 285
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 110/260 (42%), Gaps = 14/260 (5%)
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
+V ++ +I G+ K G + A + + G + + TY ++ GF ++GN+
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNA----VTYTTLIDGFCKSGNLSEAL 230
Query: 351 NL--IIEAQ--KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
L ++ ++ EP+ + + +IS + A ++ +M A Y
Sbjct: 231 QLFKVLSSRDHHAEPNVVTFN-----ALISGLCKADRLEHAFELVKQMKARDLRADTFTY 285
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ CK+ RT+E +++ ++ G V Y L+ A + Q A + R M
Sbjct: 286 TTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVA 345
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
I +Y ++ GL EN + F ++++ + R +++++ CKA ++
Sbjct: 346 KGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRE-RCPPCAVVYSALVRGCCKAALVD 404
Query: 527 DAKRTLRRMIFLQFEPNDQT 546
+A + M+ + P+ T
Sbjct: 405 EAVKYYVEMLDRRLAPDPAT 424
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 90/213 (42%), Gaps = 4/213 (1%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
+V + + II + D+A +L+E + C S + + +CK R EA
Sbjct: 101 ALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCC--SSDVIAITSVARGFCKAQRVDEA 158
Query: 423 TQLVMD-ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
QL++D + + D+ ++ +I + + A+ + + +Y T++
Sbjct: 159 YQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218
Query: 482 GLMEN-HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
G ++ + E + F D E +N++I CKA RLE A +++M
Sbjct: 219 GFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDL 278
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ TY +L++G + V ++ E+ R+
Sbjct: 279 RADTFTYTTLMDGLCKQGRTSEVSRVFEEMLRE 311
>gi|147841962|emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]
Length = 701
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 138/315 (43%), Gaps = 15/315 (4%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
+++ AEK+ + M GV+P+ +F + + L K VE M EFG V Y
Sbjct: 190 RNLDXAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTY 249
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLII 354
S++I Y + GN++ A L E+ T+ +++ + +GN G N+
Sbjct: 250 SAMIDAYGRAGNVDMA----LKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYE 305
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
E + L G+ + + ++ A +A +I EM G + G Y L+AY
Sbjct: 306 EMKAL---GVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLSWGTYAALLRAYG 362
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR--IYD- 471
+ +A + ++ GL+L V Y+ L+ + A ++F DM+ + + D
Sbjct: 363 RARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDS 422
Query: 472 -LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
S +TI + + E M + E +P + V T S+I + KA R ++ R
Sbjct: 423 WTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLT----SLIQCYGKANRTDEVVR 478
Query: 531 TLRRMIFLQFEPNDQ 545
T R++ L P+D+
Sbjct: 479 TFDRLLELDITPDDR 493
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 153/389 (39%), Gaps = 62/389 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN + ++G C G +S+A ++ M +G RPN ++G L + G V+
Sbjct: 160 PNTVTFTSLVKGLCLG-SRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVK 218
Query: 278 L-ESLMNEFG-----FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
L E ++N G +V Y ++I K G ++ L M+ S +
Sbjct: 219 LHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFL------EMKGRGISPD 272
Query: 332 T--YCEVVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
Y ++ G G KGL N +++ + + P+ VV +V +I A G ++
Sbjct: 273 VVAYSSIIHGMCHTGRWEGAKGLFNEMVD-EGVHPN--VVTFNV---LIDALCKAGKMEE 326
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A+ +L M G S Y + +C E R +A L + + S G++ D +Y+ LI
Sbjct: 327 ANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLIN 386
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME--------------------- 485
S A L+R+M I +Y T++TGL
Sbjct: 387 GYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTP 446
Query: 486 ---------------NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
NH E M F +E+ + +N +I CKA ++E A+
Sbjct: 447 ESCTYNILLDGLCKNNHLSEAMELF--HYLENHDFQPSIQIFNCLIDGLCKARKIEIARE 504
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
R+ EPN TY +I+G + Q
Sbjct: 505 LFNRLSHEGLEPNVITYTVMIHGLCKSGQ 533
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 165/416 (39%), Gaps = 29/416 (6%)
Query: 181 GGFLVDICRKNSNFVAFLKVFEECCRIAL-DENLDF--------MKPNIYACNAALEGCC 231
GGF V I N V + + + C+ L D+ + + P++ A ++ + G C
Sbjct: 228 GGFGVTI---KPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMC 284
Query: 232 YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQM 291
+ A+ + M GV PN +F L G E+ L LM + G S
Sbjct: 285 H-TGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDT 343
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLAN 351
Y++LI G+ G ++ A R + + + +E S Y ++ G+ ++G +
Sbjct: 344 FTYNTLIDGFCLEGRIDDA-RDLFVSMESKGIETDAVS---YNVLINGYCKSGRMVEAKK 399
Query: 352 LIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
L E +++ P+ I + +++ G A ++ EM + Y
Sbjct: 400 LYREMMCKEIMPTVITYNT-----LLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNIL 454
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
L CK + +EA +L + + Q + ++ LI+ ++ + A LF + +
Sbjct: 455 LDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGL 514
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+Y ++ GL ++ + E A L +E+ +N+++ FC+ ++
Sbjct: 515 EPNVITYTVMIHGLCKSGQLE-NAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVV 573
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFE 585
L+ M F P+ T +++ E+Y L + GQ G +E
Sbjct: 574 ELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLL----PTFPAQGQTGRGYE 625
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 160/397 (40%), Gaps = 36/397 (9%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+++A +++ET S G P+ L +G + G + Y++
Sbjct: 55 LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
L++GY + G L++A R I +M TY +++G G V L+ +
Sbjct: 115 LVAGYCRYGRLDAARRLI------ASMPVPP-DAYTYTPIIRGLCDRGRVGDALALLDDM 167
Query: 357 --QKLEPSGIV-------VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
+ +PS + V +S GFG +A ++LDEM A GC+ + Y
Sbjct: 168 LQRGCQPSVVTYTVLLEAVCKSSGFG------------EAMNVLDEMRAKGCTPNIVTYN 215
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ C+E R +A +++ +SS G Q D+ +Y +++ ++ + LF +M +
Sbjct: 216 VIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK 275
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+ + ++ ++ E L ++ + T N +I+A CK GR++D
Sbjct: 276 KCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG-CTPNTTLCNIVINAICKQGRVDD 334
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN 587
A L M P+ +Y +++ G A + W K + +K
Sbjct: 335 AYDFLNNMGMYGCNPDTISYTTVLRGLCRAGR-------WEHAKELLPEMVRKNCPPNEV 387
Query: 588 LVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ F+ L + G + ++++E E V Y
Sbjct: 388 TFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTY 424
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 136/355 (38%), Gaps = 59/355 (16%)
Query: 209 LDENLDFMKP-NIYACN-------AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
+D+ DF+ +Y CN L G C A++++ M PNE +F
Sbjct: 332 VDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRA-GRWEHAKELLPEMVRKNCPPNEVTFN 390
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
+ KGL E+ ++L LM E+G S +V Y++L+ G+ G ++SA
Sbjct: 391 TFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF------ 444
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGI-ISAC 378
N + + TY ++ G + A L+ QK P +V F + +S
Sbjct: 445 -NNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLN-----AVTFNVLVSFF 498
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
G ++A ++++M GC+ L + L K+ + EA +L+ + S G+ LD
Sbjct: 499 CQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDT 558
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
Y ++++ + A +
Sbjct: 559 ITYSSVVDVLSREDRTEEAIQML------------------------------------H 582
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
V+D + K +N I+ A CK + A M+ PN+ TY+ LI G
Sbjct: 583 AVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEG 637
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 147/350 (42%), Gaps = 24/350 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEK 274
+ P+ Y + G C V DA +++ M G +P+ ++ L + G E
Sbjct: 137 VPPDAYTYTPIIRGLC-DRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEA 195
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--T 332
+ L+ M G + +V Y+ +I+G + G ++ A + + F + +
Sbjct: 196 MNVLDE-MRAKGCTPNIVTYNVIINGMCREGRVDDAKEIL------NRLSSYGFQPDIVS 248
Query: 333 YCEVVKGFLQN---GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
Y V+KG +VK L +++ +K P+ + D V F G+ ++A
Sbjct: 249 YTTVLKGLCAARRWDDVKVLFAEMVD-KKCVPNEVTFDMLVRFFCRG-----GMVERAIQ 302
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+L +M+ GC+ + + A CK+ R +A + ++ G D +Y ++
Sbjct: 303 VLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLC 362
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
+ ++ A L +M + ++ T + L + E A L E++ + V
Sbjct: 363 RAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE-QAIKLIELMPEYGCSVGI 421
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+N+++H FC GR++ A L EPN TY +L+ G AE+
Sbjct: 422 VTYNALVHGFCVQGRVDSALELFNN---LPCEPNTITYTTLLTGLCHAER 468
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 147/349 (42%), Gaps = 16/349 (4%)
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVA 196
P ++ + T+ M A A++K M +N+ P + L+D K+ N A
Sbjct: 263 PNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENK-VSPNSVTFNVLIDGFCKDENLSA 321
Query: 197 FLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
LKVFEE L KP + N+ + G C +++A+ +++ M ++PN
Sbjct: 322 ALKVFEEMQSQGL-------KPTVVTYNSLVNGLC-NEGKLNEAKVLLDEMLSSNLKPNV 373
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
++ L Y K L E+ EL + + G + ++ +++L+ GY K G +E A +
Sbjct: 374 ITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKV 433
Query: 317 CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
L G + + TY ++ GF + G ++ + NL+ E Q G+ D +IS
Sbjct: 434 MLEKGFLPNAS----TYNCLIVGFCREGKMEEVKNLLNEMQ---CRGVKADTVTYNILIS 486
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
A KA ++DEM G Y L YC E A L + G
Sbjct: 487 AWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWA 546
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+V Y+ LI+ + A L +M E + + +Y I +ME
Sbjct: 547 NVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMME 595
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 140/319 (43%), Gaps = 13/319 (4%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
E V + M + PN +F + G K ++ M +GF +V Y++LI
Sbjct: 214 VEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLID 273
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI--IE 355
GY K+G + + + M ++ S T+ ++ GF ++ N+ + ++
Sbjct: 274 GYCKMGRVGKMYKADAIL---KEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQ 330
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
+Q L+P+ + + +++ N G ++A +LDEM + + Y + YCK
Sbjct: 331 SQGLKPTVVTYN-----SLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCK 385
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
+ EA +L +I GL +V ++ L+ + AF L + M E +
Sbjct: 386 KKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAST 445
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
Y ++ G + E + L+E ++ V+ T +N +I A+C+ + A R + M
Sbjct: 446 YNCLIVGFCREGKMEEVKNLLNE-MQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEM 504
Query: 536 IFLQFEPNDQTYLSLINGY 554
+ +P+ TY L+NGY
Sbjct: 505 LDKGLKPSHLTYNILLNGY 523
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
AY + +T + +L V + + L+ A + +F ++++M +I
Sbjct: 169 AYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISP 228
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-----EVKTHDWNSIIHAFCKAGR-- 524
++ T++ GL + + L A +VV+D +V V T +N++I +CK GR
Sbjct: 229 NLITFNTVINGLCKVGK--LNKA--GDVVDDMKVWGFWPNVVT--YNTLIDGYCKMGRVG 282
Query: 525 -LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+ A L+ M+ + PN T+ LI+G+ E + L ++ E++
Sbjct: 283 KMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQ 330
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 144/351 (41%), Gaps = 49/351 (13%)
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
SFG + G K L +++ EFG S +V Y++LI G K GN+ A L C
Sbjct: 160 SFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKN--LFC 217
Query: 318 LGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII 375
M + + TY ++ GF + G + + + ++ SGIV + +I
Sbjct: 218 ----KMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMY---ENMKRSGIVPNAYAYNCLI 270
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
S N G+ DKA + EM G + G+ Y + C+ + EA +LV ++ GL
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL------------ 483
++ Y+ LI + SA LF ++ + + +Y T++ G
Sbjct: 331 PNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390
Query: 484 ---ME---------------------NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAF 519
ME NH + A + ++E + + ++ ++H
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNHTEK--ACEMHSLMEKSGLVPDVYTYSVLLHGL 448
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
C G +++A + + + + +PN Y ++I+GY + L + +E+
Sbjct: 449 CVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEM 499
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 137/369 (37%), Gaps = 48/369 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ ++GCC +V A+ + M+ LG+ PN ++ L + +GLQ +
Sbjct: 189 LSPNVVIYTTLIDGCCKD-GNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREG 247
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS--KETY 333
++ M G Y+ LIS Y G ++ A + M + + TY
Sbjct: 248 FQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVF------AEMREKGIACGVMTY 301
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G + L+ + K+ S +V ++ +I+ ++ D A + ++
Sbjct: 302 NILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI---LINGFCDVRKMDSAVRLFNQ 358
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS---------------------- 431
+ + G S L Y + Y K A A LV ++
Sbjct: 359 LKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNH 418
Query: 432 -------------SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
SGL DV Y L+ + + A LF+ + E + Y T
Sbjct: 419 TEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNT 478
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ G + L+E+V+ V + S I C+ + ++A+ L +MI
Sbjct: 479 MIHGYCKEGSSYRALRLLNEMVQSGMVP-NVASFCSTIGLLCRDEKWKEAELLLGQMINS 537
Query: 539 QFEPNDQTY 547
+P+ Y
Sbjct: 538 GLKPSVSLY 546
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 112/288 (38%), Gaps = 22/288 (7%)
Query: 336 VVKGFLQNGN-VKGLANL-IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++KG + G VKG L ++E L P+ ++ +I C G A ++ +
Sbjct: 164 MIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTT-----LIDGCCKDGNVMLAKNLFCK 218
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
MN G Y + + K+ E Q+ ++ SG+ + Y+ LI
Sbjct: 219 MNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGM 278
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
AF +F +MRE I +Y ++ GL + A L V + +N
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFG-EAVKLVHKVNKVGLSPNIVTYN 337
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+I+ FC +++ A R ++ P TY +LI GY E L + E++ +
Sbjct: 338 ILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
+ L+DAF A + EK+ EM ++K
Sbjct: 398 CIAPSKVTYTI---LIDAF-----------ARLNHTEKACEMHSLMEK 431
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 3/211 (1%)
Query: 362 SGIVVDRSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
S +V+D + FGI I C G K +L + G S + +Y + CK+
Sbjct: 152 SKVVLD-AYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
A L ++ GL + Y L+ + F ++ +M+ + I +Y ++
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
+ + + E+ E + +N +I C+ + +A + + ++ +
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREK-GIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
PN TY LING+ + S + +++++K
Sbjct: 330 SPNIVTYNILINGFCDVRKMDSAVRLFNQLK 360
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
CS +Y + AY H T +A + + G ++ L+ I S F A+
Sbjct: 85 CSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAW 144
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENH---RPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+F +++ + D S+ ++ G E + + A L+E P V + + ++
Sbjct: 145 WIFNELKSKVVLDAY-SFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVI----YTTL 199
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
I CK G + AK +M L PN TY L+NG+ M+ +KR
Sbjct: 200 IDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKR 256
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 151/379 (39%), Gaps = 55/379 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ +CN+ L ++ A V E M LG+ P+ S+ + Y +G ++
Sbjct: 219 PSLRSCNSLLSNLVQNGEAFK-ALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFN 277
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M +V Y+SLI GYV LG++ A + + L G E S TY ++
Sbjct: 278 FVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENS----RTYTLLI 333
Query: 338 KGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
KG+ + G ++ +A+KL + VD V +I A G D A I D
Sbjct: 334 KGYCKRGQME-------QAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA 386
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G + + + YCK +A ++++ + L+ D Y+ L++ +D
Sbjct: 387 MLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQED 446
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
F AF L +M KG T++T L + VE H WN
Sbjct: 447 FIKAFKLCDEMHN------KGVNFTVVT----------YNTLLKNLFHVGHVEHALHIWN 490
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++H KR + PN+ TY +L++ + + +M+W K
Sbjct: 491 -LMH-----------KRGV--------APNEVTYCTLLDAFFKVGTFDRAMMIW---KDA 527
Query: 574 ISTDGQKGIKFEHNLVDAF 592
+S K I + ++ F
Sbjct: 528 LSKGFTKSITLYNTMICGF 546
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 91/227 (40%), Gaps = 7/227 (3%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AEK+ M + +E +G L + Y G + + + M + G V +SLI+
Sbjct: 345 AEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLIN 404
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
GY KLG++ A+ +L+ + N++ + T ++ GF + + L E
Sbjct: 405 GYCKLGHVNKAAE-VLVSMKDWNLKPDSYGYNT---LLDGFCKQEDFIKAFKLCDEMHNK 460
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
+ VV + ++ ++G + A I + M+ G + Y L A+ K
Sbjct: 461 GVNFTVVTYNT---LLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTF 517
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
A + D S G + Y+ +I + A +F M+E
Sbjct: 518 DRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKE 564
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 158/351 (45%), Gaps = 21/351 (5%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
L + +A + M P S FL + + G + + + + M G + +
Sbjct: 173 LGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFT 232
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLAN 351
Y+ +I K G+LE++ R + M + S + TY ++ G+ + G+++ +A+
Sbjct: 233 YNVMIDYLCKEGDLENSRRLFV------QMREMGLSPDVVTYNSLIDGYGKVGSLEEVAS 286
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
L E + + G V D G+I+ +A EM G + Y +
Sbjct: 287 LFNEMKDV---GCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLID 343
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
A+CKE A +L+ D+ +GL + Y +LI+A+ + + A+ L DM +A +
Sbjct: 344 AFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKL 403
Query: 472 LKGSYLTIMTGLMENHR----PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+Y ++ GL + R E+ + L + + P +V T +++H + KA R+ED
Sbjct: 404 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS-PNQQVYT----ALVHGYIKAERMED 458
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK-RKISTD 577
A + L++M +P+ Y S+I G+ + + ++ E+K R IS +
Sbjct: 459 AMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN 509
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 143/344 (41%), Gaps = 13/344 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+++ N ++ C + ++ ++ M +G+ P+ ++ L Y G E++
Sbjct: 226 IAPSVFTYNVMIDYLCKE-GDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEV 284
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
L + M + G ++ Y+ LI+ Y K + A M+ + TY
Sbjct: 285 ASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYF------SEMKNNGLKPNVVTY 338
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ F + G ++G L+ + ++ +G++ + +I A G +A +L++
Sbjct: 339 STLIDAFCKEGMMQGAIKLLXDMRR---TGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G + + Y L CK R EA ++ + G+ + Y AL+ I ++
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A + + M E I Y +I+ G + E L+E+ + +
Sbjct: 456 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM-KSRGISANPVIST 514
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+II A+ KAG+ DA + M + E TY LI+G A
Sbjct: 515 TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEA 558
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 139/343 (40%), Gaps = 23/343 (6%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I N L C + + A + M G++PN ++ L + +G+ + ++
Sbjct: 298 PDIITYNG-LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIK 356
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M G Y+SLI K GNL A + + L G + TY ++
Sbjct: 357 LLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG----VKLNIVTYTALL 412
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
G + G +IEA+++ S GI ++ V ++ + + A IL +
Sbjct: 413 DGLCKAGR-------MIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQ 465
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M C L +Y + +C + + E ++ ++ S G+ + +I+A +
Sbjct: 466 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 525
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTH 510
A + F++M++ + +Y ++ GL E EL + ++ P V V T
Sbjct: 526 SSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYT- 584
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
S+I C +E AK+ M P+ + +LI+G
Sbjct: 585 ---SLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDG 624
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 138/334 (41%), Gaps = 15/334 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+K NI A L+G C + + +AE+V +M G+ PN+ + L + Y E
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMI-EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDA 459
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+++ M E ++ Y S+I G+ LE ++ IL + + + T
Sbjct: 460 MKILKQMTECNIKPDLILYGSIIWGHCSQRKLEE-TKLILEEMKSRGISANPVISTT--- 515
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ + + G N E Q + +V V +I G+ + A M
Sbjct: 516 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCV---LIDGLCEAGIVELAVDYFCRML 572
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ G + VY + C + A +L ++ G+ D+ + ALI+ ++ + Q
Sbjct: 573 SLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQ 632
Query: 456 SAFSLFRDMREARI-YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A L M E I +DL Y ++++G + F +E++E + +
Sbjct: 633 EALVLISRMTELAIEFDLH-VYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVL-CIC 690
Query: 515 IIHAFCKAGRLEDA---KRTLRRMIFLQFEPNDQ 545
++ + K G+L++A K + RM + FE + Q
Sbjct: 691 LLREYYKRGQLDEAIELKNEMERMAY-SFEFDAQ 723
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 27/279 (9%)
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
+V ++ + G+ G E A + I +G G + + TY EV+ GFL N + +
Sbjct: 456 NVVSFARCLCGF---GKFEKAYKVIHEMMGNGFVPDT----STYSEVI-GFLCNAS--RV 505
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
N ++++ +G+V D +I G+ +AH+ LDEM GC + Y
Sbjct: 506 ENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTL 565
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR-EAR 468
+ AY K + + A +L + + G +V Y ALI+ S + + A ++ MR +A
Sbjct: 566 IHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDAD 625
Query: 469 IYDLKG---------------SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
I D+ +Y ++ GL + H+ + L+ + D E T ++
Sbjct: 626 IPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDG-CEPNTIVYD 684
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++I FCKA +L++A+ +M+ + PN TY SLI+
Sbjct: 685 ALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLID 723
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 147/356 (41%), Gaps = 42/356 (11%)
Query: 221 YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
+ CNA+ V +A + + M GV P+ ++ L ++ G+ ++
Sbjct: 498 FLCNAS---------RVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 548
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
M G +V Y++LI Y+K + A+ L + G TY ++ G+
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVI----TYTALIDGY 604
Query: 341 LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
++GN++ + ++ + D + F I +++ ++ N
Sbjct: 605 CKSGNIEKACQIY---ARMRGDADIPDVDMYFKI------------KNNVAEKPNV---- 645
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
V G V L CK H+ +A L+ + G + + YDALI+ + A +
Sbjct: 646 VTYGALVDGL---CKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIH 517
F M E +Y +++ L ++ R +L+ L +++E+ P + + + +I
Sbjct: 703 FHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVI----YTEMID 758
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
K + ++A + + M +PN TY ++I+G+ A + L ++ E+ K
Sbjct: 759 GLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSK 814
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 133/358 (37%), Gaps = 48/358 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN+ A ++G C V DA ++ETM V G PN + L + ++
Sbjct: 642 KPNVVTYGALVDGLCKA-HKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQ 700
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
E+ M E G++ + YSSLI K L+ + V
Sbjct: 701 EVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLK-----------------------V 737
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ L+N N++I + +I + +D+A+ ++ M
Sbjct: 738 LSKMLENSCA---PNIVIYTE----------------MIDGLSKVAKTDEAYKLMLMMEE 778
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
GC + Y + + K + + +L ++ S G + Y LI +
Sbjct: 779 KGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDE 838
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A++L +M++ SY ++ G R +++ L E VE + +I
Sbjct: 839 AYALLEEMKQTYWPKHVSSYCKVIEGY---KREFILSLGLLEEVEKNGSAPTILLYKVLI 895
Query: 517 HAFCKAGRLEDAKRTLRRMI--FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
F KAGRLE A + +I + Y SLI + A + +++++ R
Sbjct: 896 DNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIR 953
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 143/353 (40%), Gaps = 46/353 (13%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A+ V MS LG+ +E + GF A G K E SL+ + F + Y+ +IS
Sbjct: 260 AQLVHREMSELGLSMDEFTLGFFAQALCKVG---KWREALSLIEKEDFVPNTILYNKMIS 316
Query: 300 GYVKLGNLESA-----------------SRTILLCLGGGNMEQSDFSKET---------- 332
G + E A + ILLC G N +Q K
Sbjct: 317 GLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLC-GCLNKKQLGRCKRILSMMIAEGCY 375
Query: 333 -----YCEVVKGFLQNGNVKGLANLIIEAQKLE--PSGIVVDRSVGF----GIISACVNL 381
+ +V + ++ + L+ + +K E P +V + +G G + V
Sbjct: 376 PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTF 435
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
L++KA+ +EM + G + V + C + +A +++ ++ +G D Y
Sbjct: 436 ELAEKAY---NEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTY 492
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+I + ++AF LF++M+ + +Y ++ + + +LDE+V
Sbjct: 493 SEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR 552
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
D E + ++IHA+ KA ++ A MI PN TY +LI+GY
Sbjct: 553 DG-CEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 604
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 157/434 (36%), Gaps = 53/434 (12%)
Query: 137 PKLLDFQTVHTLLGSMRNANTA---APAFALVKCM-----FKNRYFMPFELWGGFLVDIC 188
P + F+ M +A T + +C+ F+ Y + E+ G V
Sbjct: 430 PGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDT 489
Query: 189 RKNSNFVAFLKVFEECCRIALDENLDFM---------KPNIYACNAALEGCCYGLQSVSD 239
S + FL C + EN F+ P++Y ++ C +
Sbjct: 490 STYSEVIGFL------CNASRVENAFFLFKEMKGTGVVPDVYTYTILID-CFSKAGIIKQ 542
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV-ELESLMNEFGFSSQMVFYSSLI 298
A ++ M G P ++ L + Y LK + + EL LM G ++ Y++LI
Sbjct: 543 AHNWLDEMVRDGCEPTVVTYTTLIHAY-LKAKKVSVANELFELMIAKGCFPNVITYTALI 601
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
GY K GN+E A + G ++ D F NV N++
Sbjct: 602 DGYCKSGNIEKACQIYARMRGDADIPDVDMY----------FKIKNNVAEKPNVVT---- 647
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
G +VD C + D A +L+ M GC VY + +CK +
Sbjct: 648 ---YGALVD--------GLCKAHKVKD-ARDLLETMFVDGCEPNTIVYDALIDGFCKAAK 695
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
EA ++ + G +V Y +LI+ + + M E Y
Sbjct: 696 LDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTE 755
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ GL + + + A L ++E+ + + ++I F KAG+++ R M
Sbjct: 756 MIDGLSKVAKTD-EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSK 814
Query: 539 QFEPNDQTYLSLIN 552
PN TY LIN
Sbjct: 815 GCAPNFVTYTVLIN 828
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 123/311 (39%), Gaps = 33/311 (10%)
Query: 276 VELESL--MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
V LE L + +FG+ + Y++L+ +++ L++A L M + S +
Sbjct: 224 VALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQ------LVHREMSELGLSMD-- 275
Query: 334 CEVVKGFLQNGNVK----GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
E GF K A +IE + P+ I+ ++ +IS ++A
Sbjct: 276 -EFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNK-----MISGLCEASFFEEAMD 329
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
L+ M + C + Y L + + +++ + + G +++L+ A
Sbjct: 330 FLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYC 389
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLT--IMTGLM----ENHRP---ELMAAFLDEVV 500
S DF A+ L + M + + K Y+ I+ G + E P EL +E++
Sbjct: 390 KSDDFSYAYKLLKKMEKC---ECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEML 446
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
V K + S C G+ E A + + M+ F P+ TY +I A +
Sbjct: 447 SAGTVLNKV-NVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRV 505
Query: 561 FSVLMMWHEIK 571
+ ++ E+K
Sbjct: 506 ENAFFLFKEMK 516
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 161/392 (41%), Gaps = 59/392 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK--I 275
PN+ N + G V D K+ + M + NE Y + GL ++ +
Sbjct: 253 PNVKTHNIMISGLS-KCGRVDDCLKIWDRM-----KQNEREKDLYTYSSLIHGLCDEGNV 306
Query: 276 VELESLMNEFGFSS---QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD-FSKE 331
+ ES+ NE +V Y++++ G+ + G ++ + + MEQ + +
Sbjct: 307 DKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRI------MEQRNSVNIV 360
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPS-GIVVDRSV-GFGIISACVNLGLSDKAHS 389
+Y ++KG L+NG + A +I +L P+ G D + G I CVN G +KA
Sbjct: 361 SYNILIKGLLENGKIDE-ATMI---WRLMPAKGYAADNTTYGIFIHGLCVN-GYVNKALG 415
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
++ E+ + G + + Y + CK+ R EA+ LV ++S G++L+ +ALI I
Sbjct: 416 VMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-------- 501
A L R M + SY ++ GL E + +AF+ E++E
Sbjct: 476 RDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLK 535
Query: 502 -----------DPRVEVKTHDW---------------NSIIHAFCKAGRLEDAKRTLRRM 535
D ++E+ W N +IH C G+L+DA + M
Sbjct: 536 TYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
N TY +L+ GY ++W
Sbjct: 596 EHRNCTANLVTYNTLMEGYFKVRDSNRATVIW 627
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
K S+ G + L Y +K CK+ +A + + G + DV +Y +I
Sbjct: 132 KVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVI 191
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ A LF +M E R+ Y ++ G ++ ++ D+++ED V
Sbjct: 192 NDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSV 251
Query: 506 --EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
VKTH N +I K GR++D + RM + E + TY SLI+G
Sbjct: 252 YPNVKTH--NIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHG 299
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 142/390 (36%), Gaps = 53/390 (13%)
Query: 210 DENLDFMKP--NIYACNAALEGCCYGLQSVSDAEKVIETMSVL------GVRPNESSFGF 261
D LD K I+ C + L + +A++ ++ S+ GV PN ++
Sbjct: 95 DRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L + K EK + M + GF + YS++I+ K G L+ A
Sbjct: 155 LIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELF------D 208
Query: 322 NMEQSDFSKETYCE--VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
M + + + C ++ GFL+ + K L + LE S + + +IS
Sbjct: 209 EMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLW--DKLLEDSSVYPNVKTHNIMISGLS 266
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
G D I D M L Y + C E +A + ++ +DV
Sbjct: 267 KCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVV 326
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE-------LM 492
Y+ ++ + + L+R M + ++ SY ++ GL+EN + + LM
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIV-SYNILIKGLLENGKIDEATMIWRLM 385
Query: 493 AA------------FLD---------------EVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
A F+ + VE + + + SII CK RL
Sbjct: 386 PAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRL 445
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
E+A ++ M E N +LI G +
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/259 (17%), Positives = 101/259 (38%), Gaps = 43/259 (16%)
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNAC-GCSVGLGVYVPTLKAYCKEHRTAEATQL 425
D V +I + D+A + M GC G+ Y L A+ + + + L
Sbjct: 77 DEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESL 136
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
++G+ ++ Y+ LI+ S ++F+ A M + E
Sbjct: 137 FAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWK------------------E 178
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+P++ + ++++I+ K G+L+DA M + P+
Sbjct: 179 GFKPDVFS------------------YSTVINDLAKTGKLDDALELFDEMSERRVAPDVT 220
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAV 605
Y LI+G++ + + + +W ++ S +K HN++ + L K G D
Sbjct: 221 CYNILIDGFLKEKDHKMAMQLWDKLLEDSSV--YPNVK-THNIM---ISGLSKCGRVDDC 274
Query: 606 MQVVEKSQEMKVFVDKWKY 624
+++ ++ ++ + D + Y
Sbjct: 275 LKIWDRMKQNEREKDLYTY 293
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 184/483 (38%), Gaps = 110/483 (22%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T +TL+ + + AF LV CM + + +C++ S
Sbjct: 258 DLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGS-------- 309
Query: 201 FEECCRIALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
+E R+ LDE L + PN N L C + V +AE+V M GV P+ SF
Sbjct: 310 YERAKRV-LDEMLGVGLCPNAATFNPMLVESCRK-EDVWEAERVFNEMLQRGVVPDLISF 367
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR------- 312
+ +++ G + + M G V Y+ LI+GY + ++ A +
Sbjct: 368 SSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVE 427
Query: 313 -----------TIL--LCLGGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKG 348
T+L LC G + + KE T ++ G+ ++GN+
Sbjct: 428 RGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTK 487
Query: 349 LANLI--IEAQKLEPSGI------------------------VVDRSV-----GFGI-IS 376
+L + + L+P + ++ R + F I I+
Sbjct: 488 ALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILIN 547
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
+LGL +A + DEM G L +K Y + ++A + + S G+
Sbjct: 548 GFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPP 607
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
D Y+ LI + + ++F AF L +M E GL+ P L+
Sbjct: 608 DCITYNTLINSFVKEENFDRAFFLINNMEER--------------GLL----PNLVT--- 646
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+N+I+ F + GR+++A+ L +MI P+ TY SLINGYV+
Sbjct: 647 ---------------YNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVS 691
Query: 557 AEQ 559
+
Sbjct: 692 KDN 694
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 164/409 (40%), Gaps = 41/409 (10%)
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKP----NIYACNAALEGCCYGLQSV 237
GF V I N+ A +KV +A DF+K N+Y N + C +
Sbjct: 184 GFCVSINACNALLGAIVKV--GWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKD-GKL 240
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+ + M GV + ++ L Y +GL + L M G + Y++L
Sbjct: 241 DNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNAL 300
Query: 298 ISGYVKLGNLESASRTILLCLGGG---------NMEQSDFSKETYCEVVKGF---LQNGN 345
I+G K G+ E A R + LG G M KE E + F LQ G
Sbjct: 301 INGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGV 360
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
V L + S IV G+ S LG +A + ++M G +
Sbjct: 361 VPDLISF---------SSIV-------GVFSRNGELG---RALAYFEKMKGVGLVPDTVI 401
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + YC+ + A ++ ++ G +DV Y+ L+ + A LF++M
Sbjct: 402 YTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMV 461
Query: 466 EARIYDLKGSYLTIMTGLMEN-HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
E ++ + T++ G ++ + + ++ F + + +V T +N+++ FCK G
Sbjct: 462 ERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVT--YNTLMDGFCKVGE 519
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+E AK MI + P+ ++ LING+ + +W E+K K
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEK 568
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 143/348 (41%), Gaps = 15/348 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP ++ NA + G C S A++V++ M +G+ PN ++F + K E +
Sbjct: 290 LKPGLFTYNALINGLCKE-GSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRK---EDV 345
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
E E + NE G ++ +SS++ + + G L A G G + +
Sbjct: 346 WEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDT----VI 401
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++ G+ +N +V G + ++ G V+D +++ + D A +
Sbjct: 402 YTILINGYCRNDDVSGALKM---RNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFK 458
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM G + YCK+ +A L ++ L+ DV Y+ L++
Sbjct: 459 EMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVG 518
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ + A L+ DM I+ S+ ++ G DE+ E ++
Sbjct: 519 EMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKG-IKPTLVTC 577
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
N+II + +AG L A L MI P+ TY +LIN +V E +
Sbjct: 578 NTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENF 625
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 151/359 (42%), Gaps = 65/359 (18%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIET---MSVLGVRPNESSFGFLAYLYALKGLQEK 274
PN+ NA ++G C S D E I+ M G PN ++ L + G E+
Sbjct: 212 PNVAVYNALIDGYC----STGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVER 267
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS-KETY 333
+ L S M E G + +V Y++LI G G+LE A R + +ME + E
Sbjct: 268 AMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLL------HSMEACGLAPNEWT 321
Query: 334 CEV-VKGFLQNGNVKGLANLIIEAQK----LEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
C V + ++G ++ EAQ+ L GI V++ + +I A G D AH
Sbjct: 322 CLVLIDALCKHGRIE-------EAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAH 374
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+++ ++ G +Y + C+E++ EA L+ D+ SG+Q + + LI+
Sbjct: 375 NLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILID-- 432
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ +RE R + P++++ + P V
Sbjct: 433 -------------KHLREFR-----------------SDSPKMISDRMAAAGVKPDVVT- 461
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT---AEQYFSVL 564
+ I ++C+ GR+EDA+ + +MI PN TY +LI GY Q FS L
Sbjct: 462 ---YTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSL 517
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 127/328 (38%), Gaps = 35/328 (10%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y++LI+ Y G+L +A R + L G S Y V G+ + G L
Sbjct: 77 YTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDS----HAYTSFVLGYCRTGLFAHACRLF 132
Query: 354 IEAQKLEPS-GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ L P G ++ G+ +A ++ M GC+ VY +
Sbjct: 133 L----LMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHG 188
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
C R EA L+ D G +V Y+ALI+ ++ D + A +F+ M+
Sbjct: 189 LCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPN 248
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+Y ++ G ++ + E ++E P V + ++I C G LE A
Sbjct: 249 VRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVT----YTTLIQGQCSEGHLEHAF 304
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVT------AEQYFSVLMMWHEIKRKISTDGQKGIK 583
R L M PN+ T L LI+ A+Q+ L+ QKGIK
Sbjct: 305 RLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLV-------------QKGIK 351
Query: 584 FEHNLVDAFLYALVKGGFFDAVMQVVEK 611
+ + + AL K G FD +++K
Sbjct: 352 VNQVIYTSMIDALCKSGKFDGAHNLMQK 379
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 128/314 (40%), Gaps = 8/314 (2%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A++ + ++ G+ P+ ++ Y GL L LM + G + Y++L+
Sbjct: 93 AKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQ 152
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
G G + A + G + Y +V G G L+ +A
Sbjct: 153 GLCGAGMVREA----MAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMG- 207
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
G V + +V +I + G + A I M + GC + Y + +CK +
Sbjct: 208 --KGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKV 265
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A L + +GL +V Y LI+ + + AF L M + + + L +
Sbjct: 266 ERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVL 325
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ L ++ R E FL +V+ ++V + S+I A CK+G+ + A ++++I
Sbjct: 326 IDALCKHGRIEEAQQFLGSLVQK-GIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEG 384
Query: 540 FEPNDQTYLSLING 553
F P+ Y SLI+G
Sbjct: 385 FVPDAHMYSSLIDG 398
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 115/322 (35%), Gaps = 33/322 (10%)
Query: 238 SDAEKVI-ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
SD+ K+I + M+ GV+P+ ++ Y G E + M + G + Y++
Sbjct: 440 SDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNT 499
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
LI GY LG + A ++ + G + E+Y ++ L+ + L I
Sbjct: 500 LIKGYANLGLVSQAFSSLKNMIDNG----CKPNDESYTVLLGLLLKKNSYHDLVADSISL 555
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
K +VD V +L+E+ CS VY ++ K
Sbjct: 556 WK------IVDMKV----------------LEELLEEVIKLQCSSASYVYDCFIRCLSKV 593
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R EA ++ + S+ L Y +IE + + A M + SY
Sbjct: 594 DRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESY 653
Query: 477 LTIMTGLMENHRPELMAAFLDEVV--EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
I+ L E + +++ E R E+ W +I + G D R L
Sbjct: 654 RFIICALCEEGSFHTAKSIFGDILSKEYNRDEIA---WKILIDGLLQKGNTADCSRLLSF 710
Query: 535 MIFLQFEPNDQTYLSLINGYVT 556
M P Y S + G +T
Sbjct: 711 MEEQNCRPGSAIY-SRLTGEIT 731
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 143/356 (40%), Gaps = 11/356 (3%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+Y N + C Q + + + + M GV P+ ++ L Y +GL E+ EL
Sbjct: 357 NVYTLNIMINALCKN-QKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFEL 415
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M+ G + Y+++I+G K G A + L G + TY ++
Sbjct: 416 MDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT----ATYNILLV 471
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF-GIISACVNLGLSDKAHSILDEMNAC 397
+N N+ + E PS VV V F +I G D+A +M
Sbjct: 472 ECCRNDNMMDAERIFDEM----PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 527
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + +Y + +C+ +EA ++ ++ G LDV Y+ ++ + A
Sbjct: 528 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEA 587
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
LF +M E ++ ++ T++ G ++ A L E++ ++ +N++I
Sbjct: 588 DELFTEMTERGVFPDFYTFTTLINGYXKDGNMN-KAVTLFEMMIQRNLKPDVVTYNTLID 646
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
FCK +E MI + PN +Y LINGY +W E+ K
Sbjct: 647 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 702
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/535 (20%), Positives = 201/535 (37%), Gaps = 112/535 (20%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
D AW+ ++ + + + + N +I L Q N K S + +E+ D T
Sbjct: 340 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTK----SFLSDMEEKGVFPDVVT 395
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
+TL+ + AF L+ M + P +++ K ++ V +E
Sbjct: 396 YNTLINAYCRQGLLEEAFELMDSM-SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 454
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
+I M P+ N L CC ++ DAE++ + M GV P+ SF L
Sbjct: 455 LKIG-------MSPDTATYNILLVECCRN-DNMMDAERIFDEMPSQGVVPDLVSFSALIG 506
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR------------ 312
L + G ++ ++ M G + V Y+ LI G+ + G + A +
Sbjct: 507 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXL 566
Query: 313 ------TIL--LCLGGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANL- 352
TIL LC E + E T+ ++ G+ ++GN+ L
Sbjct: 567 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF 626
Query: 353 -IIEAQKLEPSGI-----------------------------VVDRSVGFGI-ISACVNL 381
++ + L+P + + + +GI I+ N+
Sbjct: 627 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 686
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G +A + DEM G + +K YC+ +A + + ++ G+ D Y
Sbjct: 687 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITY 746
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ LI I ++ AF+L M + GL+ P+++
Sbjct: 747 NTLINGFIKEENMDRAFALVNKMENS--------------GLL----PDVIT-------- 780
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+N I++ F + GR+++A+ + +MI P+ TY SLING+VT
Sbjct: 781 ----------YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVT 825
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 120/546 (21%), Positives = 213/546 (39%), Gaps = 44/546 (8%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVH 146
A +F LT L P +L L L +H + A + P +L F T
Sbjct: 135 ALSTFGKLTKLGLHPDVVTFTTL---LHGLCLDHRVSEALDLFHQICR--PDVLTFTT-- 187
Query: 147 TLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCR 206
L+ + A AL+ M +N P ++ G VD K + V+ L + +
Sbjct: 188 -LMNGLCREGRVVEAVALLDRMVENG-LQPDQITYGTFVDGMCKMGDTVSALNLLRKM-- 243
Query: 207 IALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
E + +KPN+ +A ++G C + SD+ + M G+ PN ++ + +
Sbjct: 244 ----EEISHIKPNVVIYSAIIDGLCKDGRH-SDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
+ G L M E S +V Y++LI+ +VK G A+ L G + +
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
TY ++ GF + + ++ + G D +I D
Sbjct: 359 ----ITYNSMIDGFCKQDRLDAAEDMF---YLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
+L EM G Y + +C A L + SSG+ D+ + L++
Sbjct: 412 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 471
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGS------------YLTIMTGLMENHRPELMAA 494
+ + A +F+ M+++++ DL S Y ++ GL+ N L A
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKM-DLDASHPFNGVEPDVLTYNILICGLI-NEGKFLEAE 529
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
L E + + T ++S+I CK RL++A + M F PN T+ +LINGY
Sbjct: 530 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGY 589
Query: 555 VTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
A + L ++ E+ G++GI + + +Y K G + + + ++
Sbjct: 590 CKAGRVDDGLELFCEM-------GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642
Query: 615 MKVFVD 620
V+ D
Sbjct: 643 SGVYPD 648
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 113/295 (38%), Gaps = 23/295 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ ++G C G + + D +++ M G+ N ++ L + + L G ++
Sbjct: 391 PDVFTFTTLIDGYC-GAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD 449
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA---------SRTILLCLGGGNMEQSDF 328
L M G +V ++L+ G G L+ A S+ L N + D
Sbjct: 450 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDV 509
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLS 384
TY ++ G + G +EA++L GIV D +I
Sbjct: 510 L--TYNILICGLINEGK-------FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A + M + S + + + YCK R + +L ++ G+ D Y L
Sbjct: 561 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 620
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
I + A +F++M + +Y + ++TG E A L+++
Sbjct: 621 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
L+L G+Y+ + + A LF DM +R + +M ++ RP+L+
Sbjct: 50 LKLRSGSYEI--------KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVI 101
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ L + +E ++ + + +I FC +L A T ++ L P+ T+ +L++G
Sbjct: 102 S-LYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHG 160
Query: 554 YVTAEQYFSVLMMWHEIKR 572
+ L ++H+I R
Sbjct: 161 LCLDHRVSEALDLFHQICR 179
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 153/355 (43%), Gaps = 16/355 (4%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++Y + + G C G ++ A +V + M+ GV P+ + + Y G E+ +EL
Sbjct: 289 DLYTYSTLIHGLC-GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLEL 347
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEV 336
+M + G + +V Y+ LI G + ++ A L + + D + TY +
Sbjct: 348 WKVMEKEGCRT-VVSYNILIRGLFENAKVDEAISIWEL------LPEKDCCADSMTYGVL 400
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V G +NG + +++ EA+ +D +I+ G D+ +LD+M
Sbjct: 401 VHGLCKNGYLNKALSILEEAENGRGD---LDTFAYSSMINGLCREGRLDEVAGVLDQMTK 457
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
GC V + + + + +A + ++ S G V Y+ LI ++ F
Sbjct: 458 HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSE 517
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKTHDWNSI 515
A++L ++M +Y +M GL + + ++ + +E + +VK H N I
Sbjct: 518 AYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH--NII 575
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
IH C +G++EDA + M + PN T+ +L+ G+ + +W I
Sbjct: 576 IHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 154/390 (39%), Gaps = 38/390 (9%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ N ++ C Q A++++ M G P+ S+G L A G
Sbjct: 145 LSPNLQTYNILIKISCRKKQ-FDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN------------- 322
++L M E G + + Y+ LI G+ K G++ +AS L G +
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263
Query: 323 -----------------MEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
M++++ ++ TY ++ G +GN+ G + E + +G
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKE---MAENG 320
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+ D V +++ + G ++ + M GC + Y ++ + + EA
Sbjct: 321 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRGLFENAKVDEAI 379
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+ + D Y L+ + A S+ + R +Y +++ GL
Sbjct: 380 SIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGL 439
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
R + +A LD++ + + H N++I+ F +A +LEDA R M+ P
Sbjct: 440 CREGRLDEVAGVLDQMTKH-GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 498
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
TY +LING AE++ + E+ K
Sbjct: 499 VVTYNTLINGLSKAERFSEAYALVKEMLHK 528
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 161/409 (39%), Gaps = 72/409 (17%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG-VRPNESSFGFLAYLYALKGL----- 271
PNI + N + G C K E+ + ++ NE Y + GL
Sbjct: 253 PNIPSYNVMINGLC-------KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 305
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
+ + M E G S +V Y+++++GY++ G +E CL + + + +
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEE-------CLELWKVMEKEGCRT 358
Query: 332 --TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII--SACVNLGLSDKA 387
+Y +++G +N V + I +L P S+ +G++ C N G +KA
Sbjct: 359 VVSYNILIRGLFENAKV----DEAISIWELLPEKDCCADSMTYGVLVHGLCKN-GYLNKA 413
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
SIL+E + Y + C+E R E ++ ++ G + + +A+I
Sbjct: 414 LSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVING 473
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ + + A F +M KG + T++T
Sbjct: 474 FVRASKLEDALRFFGNMVS------KGCFPTVVT-------------------------- 501
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N++I+ KA R +A ++ M+ ++PN TY L+NG ++ L +W
Sbjct: 502 ----YNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLW 557
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMK 616
+ +KG K + + + ++ L G + +Q+ + ++ K
Sbjct: 558 CQAL-------EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 71/169 (42%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A S G S L Y +K C++ + +A +L+ + G DV +Y L
Sbjct: 131 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTL 190
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I + + A LF +M E + Y ++ G + + + +++ P
Sbjct: 191 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
V +N +I+ CK G+ +++ RM + + TY +LI+G
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHG 299
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 157/348 (45%), Gaps = 21/348 (6%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ +A + M P S FL + + G + + + + M G + + Y+
Sbjct: 235 LEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNV 294
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
+I K G+LE++ R + M + S + TY ++ G+ + G+++ +A+L
Sbjct: 295 MIDYLCKEGDLENSRRLFV------QMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFN 348
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
E + + G V D G+I+ +A EM G + Y + A+C
Sbjct: 349 EMKDV---GCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFC 405
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
KE A +L +D+ +GL + Y +LI+A+ + + A+ L DM +A +
Sbjct: 406 KEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIV 465
Query: 475 SYLTIMTGLMENHR----PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+Y ++ GL + R E+ + L + + P +V T +++H + KA R+EDA +
Sbjct: 466 TYTALLDGLCKAGRMIEAEEVFRSMLKDGIS-PNQQVYT----ALVHGYIKAERMEDAMK 520
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK-RKISTD 577
L++M +P+ Y S+I G+ + + ++ E+K R IS +
Sbjct: 521 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN 568
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 147/374 (39%), Gaps = 46/374 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+++ N ++ C + ++ ++ M +G+ P+ ++ L Y G E++
Sbjct: 285 IAPSVFTYNVMIDYLCKE-GDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEV 343
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
L + M + G ++ Y+ LI+ Y K + A M+ + TY
Sbjct: 344 ASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYF------SEMKNNGLKPNVVTY 397
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ F + G ++G L ++ ++ +G++ + +I A G +A +L++
Sbjct: 398 STLIDAFCKEGMMQGAIKLFVDMRR---TGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G + + Y L CK R EA ++ + G+ + Y AL+ I ++
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV-------------- 499
+ A + + M E I Y +I+ G + E L+E+
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574
Query: 500 --------------------VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
++D VE + +I CKAG +E A RM+ L
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG 634
Query: 540 FEPNDQTYLSLING 553
+PN Y SLI+G
Sbjct: 635 LQPNVAVYTSLIDG 648
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 140/343 (40%), Gaps = 23/343 (6%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I N L C + + A + M G++PN ++ L + +G+ + ++
Sbjct: 357 PDIITYNG-LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIK 415
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M G Y+SLI K GNL A + + L G + TY ++
Sbjct: 416 LFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG----VKLNIVTYTALL 471
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
G + G +IEA+++ S GI ++ V ++ + + A IL +
Sbjct: 472 DGLCKAGR-------MIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQ 524
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M C L +Y + +C + + E ++ ++ S G+ + +I+A +
Sbjct: 525 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 584
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTH 510
A + F++M++ + +Y ++ GL + EL + ++ P V V T
Sbjct: 585 SSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYT- 643
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
S+I CK +E AK+ M P+ + +LI+G
Sbjct: 644 ---SLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDG 683
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 131/357 (36%), Gaps = 44/357 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+K NI A L+G C + + +AE+V +M G+ PN+ + L + Y E
Sbjct: 460 VKLNIVTYTALLDGLCKAGRMI-EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDA 518
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+++ M E ++ Y S+I G+ LE ++ IL + + + T
Sbjct: 519 MKILKQMTECNIKPDLILYGSIIWGHCSQRKLEE-TKLILEEMKSRGISANPVISTT--- 574
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ + + G N E Q + +V V +I G+ + A M
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCV---LIDGLCKAGIVELAVDYFCRML 631
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ G + VY + CK + A +L ++ G+ D+ + ALI+ ++ + Q
Sbjct: 632 SLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQ 691
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A L M E I E H + S+
Sbjct: 692 EALVLISRMTELAI------------------------------------EFDLHVYTSL 715
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+ F + G L A++ MI P + + L+ Y Q + + +E++R
Sbjct: 716 VSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMER 772
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
G +D L + + A F MR R S ++ L ++ +L+ F ++
Sbjct: 220 GVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFND 279
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
++ + +N +I CK G LE+++R +M + P+ TY SLI+GY
Sbjct: 280 MI-GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVG 338
Query: 559 QYFSVLMMWHEIK 571
V +++E+K
Sbjct: 339 SLEEVASLFNEMK 351
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 141/318 (44%), Gaps = 12/318 (3%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+ + V M LG+ P+ ++ + Y ++G E ++L + M +G MV Y+ LI
Sbjct: 568 EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILI 627
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
G K G +E + L G + K ++K + ++ + + +K
Sbjct: 628 GGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKF----LLKAYSRSRKADAILQI---HKK 680
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
L G+ +++ V +I+ LG++ KA+ +L EM G S + Y ++ YC
Sbjct: 681 LVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSH 740
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
+A + SG+ ++ Y+AL+E T+ + A L +MRE + +Y
Sbjct: 741 VEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNI 800
Query: 479 IMT--GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+++ G + N R + E++ + T +N +I + KAG++ A+ L M+
Sbjct: 801 LVSGHGRVGNKRDSI--KLYCEMITKGFIPT-TGTYNVLIQDYAKAGKMRQARELLNEML 857
Query: 537 FLQFEPNDQTYLSLINGY 554
PN TY LI G+
Sbjct: 858 TRGRIPNSSTYDVLICGW 875
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 162/394 (41%), Gaps = 57/394 (14%)
Query: 218 PNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P++ C++ L G C +G +++A ++ M +G+ PN S+ + G +
Sbjct: 269 PDVVTCSSILYGLCRHG--KLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAF 326
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS---RTILLCLGGGNMEQSDFSKETY 333
+S M G S +V ++++ G K G + A +TIL N+ + TY
Sbjct: 327 NHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKL----NLVPNCV---TY 379
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G + G+V+ A ++ QK+E ++ + II+ G+ +KA +L +
Sbjct: 380 TALLDGHCKVGDVE-FAETVL--QKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRK 436
Query: 394 MNACGCSVGLGVYVPTLKAYCK--EHRTA------------------------------- 420
M + VY L Y + +H A
Sbjct: 437 MVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGG 496
Query: 421 --EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
EA L+ DI S G+ LDV NY +L++ + +A S+ ++M E + +Y
Sbjct: 497 MKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNA 556
Query: 479 IMTGLME--NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+ GL+ + P+ + + + E+ P +NS+++ + G+ E+A L M
Sbjct: 557 LTKGLLRLGKYEPKSVFSRMIELGLTPDCVT----YNSVMNTYFIQGKTENALDLLNEMK 612
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
PN TY LI G V+ + HE+
Sbjct: 613 SYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEM 646
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 142/373 (38%), Gaps = 37/373 (9%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN A L+G C + V AE V++ M V PN +F + YA KG+ K VE
Sbjct: 374 PNCVTYTALLDGHC-KVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVE 432
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS-------------RTILLCLGGGNME 324
+ M + + Y+ L+ GY + G E+A+ I+ + N++
Sbjct: 433 VLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLK 492
Query: 325 QSDFSKET------------------YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
+S KE Y ++ G+ + GN +++ Q++ +
Sbjct: 493 RSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVV---QEMTEKDMQF 549
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D + + LG + S+ M G + Y + Y + +T A L+
Sbjct: 550 DVVAYNALTKGLLRLG-KYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLL 608
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
++ S G+ ++ Y+ LI + + S+ +M + ++ +
Sbjct: 609 NEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRS 668
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ + + ++V D + + +N++I C+ G + A L M+ + T
Sbjct: 669 RKADAILQIHKKLV-DMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVT 727
Query: 547 YLSLINGYVTAEQ 559
Y +LI GY T
Sbjct: 728 YNALIRGYCTGSH 740
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 87/428 (20%), Positives = 168/428 (39%), Gaps = 26/428 (6%)
Query: 222 ACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
CN ++G C GL V AE ++ + GV + L Y GL + ++L
Sbjct: 112 TCNILVKGYCQIGL--VQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVE 169
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
+ G +V Y++L++ + K G+L A + LG ++S + E G
Sbjct: 170 DGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGL 229
Query: 341 --LQNGNV------------KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
LQ V +G+ + +++ SG++ D I+ G +
Sbjct: 230 RDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTE 289
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A +L EM G Y + A K R EA + G+ +D+ +++
Sbjct: 290 AAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMD 349
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ + A +F+ + + + +Y ++ G + E L ++ E V
Sbjct: 350 GLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKM-EKEHVL 408
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
++SII+ + K G L A LR+M+ + PN Y L++GY Q+ +
Sbjct: 409 PNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGF 468
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ 626
+ E+K G++ + + D L L + G +++ +++D + Y
Sbjct: 469 YKEMK-------SWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNY-S 520
Query: 627 AFMENHKK 634
+ M+ + K
Sbjct: 521 SLMDGYFK 528
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 152/365 (41%), Gaps = 49/365 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN----ESSFGFLAYLYALKGLQE 273
PN+++ N + C KV + LG N ++ + + + +GL +
Sbjct: 43 PNVFSVNLLVHSLC----------KVGDLGLALGYLRNSVFDHVTYNTVVWGFCKRGLAD 92
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ L S M + G V + L+ GY ++G ++ A I+ L GG + T
Sbjct: 93 QGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYA-EWIMGNLVGGGVPLDAIGLNT- 150
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+V G+ + G V +L+ + K +G+ D +++A G KA S+++E
Sbjct: 151 --LVDGYCEVGLVSRALDLVEDGWK---NGVKPDIVTYNTLVNAFCKRGDLAKAESVVNE 205
Query: 394 ------------MNACGCSV--GLGVYVPT-------LKAYCKEHRTAEATQLVMDISSS 432
+N CG GL PT + AYCK + L + S
Sbjct: 206 ILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMS 265
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G+ DV +++ A L R+M + SY TI++ L+++ R +M
Sbjct: 266 GVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGR--VM 323
Query: 493 AAFLDE---VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
AF + VV +++ +++ KAG+ ++A+ + ++ L PN TY +
Sbjct: 324 EAFNHQSQMVVRGISIDLVL--CTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTA 381
Query: 550 LINGY 554
L++G+
Sbjct: 382 LLDGH 386
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 155/367 (42%), Gaps = 30/367 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ + ++G C + V A +V + M G PN ++G L Y K
Sbjct: 454 LAPNVVTYTSIIDGYC-KVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKA 512
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS--KETY 333
+ L + M E G + ++ Y++LI G K ++A R + MEQ+ + ++ Y
Sbjct: 513 MALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEM------MEQNGLTPDEQAY 566
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+ ++G + + ++ G+V+ + ++ G +D A ++++
Sbjct: 567 NVLTDALCKSGRAEEAYSFLVR------KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEK 620
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M GC L Y L+A CK+ + EA ++ ++ SG++ ++ Y +I I
Sbjct: 621 MVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGK 680
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A SLF +M + +Y ++ + R E + E+ D V +N
Sbjct: 681 HDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDG-VTPDVVTYN 739
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY---------LSLINGYVTAEQYFSVL 564
I+ G ++ A TL+RM+ EPN TY +SLIN + Y
Sbjct: 740 IFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAH-----YVDTS 794
Query: 565 MMWHEIK 571
MW+ I+
Sbjct: 795 GMWNWIE 801
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 151/358 (42%), Gaps = 59/358 (16%)
Query: 206 RIALDE-NLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
R LDE L + P+++ NA ++G C + DA + M G P++ ++ L
Sbjct: 304 RGLLDEMPLRGVVPSVWTYNAMIDGYCKS-GRMKDALGIKALMEQNGCNPDDWTYNSL-- 360
Query: 265 LYALKGLQEKIVELESLMN---EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+Y L G K+ E E L+N GF+ ++ +++LI+GY K ++ A R
Sbjct: 361 IYGLCG--GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRV------KS 412
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
NM S+ + LQ V L N++I+ +L+
Sbjct: 413 NMISSNCKLD---------LQAYGV--LINVLIKKCRLK--------------------- 440
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
+A L+EM A G + + Y + YCK A ++ + G + Y
Sbjct: 441 ----EAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTY 496
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVV 500
+LI I + A +L M+E I +Y T++ G + H E AF L E++
Sbjct: 497 GSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH--EFDNAFRLFEMM 554
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL-RRMIFLQFEPNDQTYLSLINGYVTA 557
E + +N + A CK+GR E+A L R+ + L TY SL++G+ A
Sbjct: 555 EQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVL----TKVTYTSLVDGFSKA 608
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 12/201 (5%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + AYCK+ A A + + SG+Q+D +AL+ + D + A L M
Sbjct: 182 YNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMP 241
Query: 466 EARIYDLKGSYLTIMTGLMENH--RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
+ SY ++ GL E R L+ F+ +V D + H + +I CK G
Sbjct: 242 LMGCRRNEYSYTILIQGLCEARCVREALVLVFM--MVHDG-CSLNLHTYTLLIKGLCKEG 298
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIK 583
R+ DA+ L M P+ TY ++I+GY + + L IK + +G
Sbjct: 299 RIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDAL----GIKALMEQNGCNPDD 354
Query: 584 FEHNLVDAFLYALVKGGFFDA 604
+ +N + +Y L G +A
Sbjct: 355 WTYN---SLIYGLCGGKLDEA 372
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 121/299 (40%), Gaps = 64/299 (21%)
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
+ E + +L S + + G V Y+++I Y K G+L A R L + +S
Sbjct: 159 MTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCL------LRESGMQM 212
Query: 331 ETY-CE-VVKGFLQNGNVKGLANLII-----EAQKLEPSGIVVDRSVGFGIISA-CVNLG 382
+TY C ++ G+ + +++ L++ ++ E S ++ + G+ A CV
Sbjct: 213 DTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQ----GLCEARCVREA 268
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
L + D GCS+ L Y +K CKE R +A L+ ++ G+ V Y+
Sbjct: 269 LVLVFMMVHD-----GCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYN 323
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
A+I+ S + A + LME +
Sbjct: 324 AMIDGYCKSGRMKDALGI--------------------KALMEQN--------------- 348
Query: 503 PRVEVKTHDW--NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
DW NS+I+ C G+L++A+ L I F P T+ +LINGY AE+
Sbjct: 349 ---GCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 120/326 (36%), Gaps = 70/326 (21%)
Query: 191 NSNFVAFL--KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMS 248
N++F A L K+ E C K ++Y + L+ C + +++A +++ M+
Sbjct: 610 NTDFAAVLIEKMVNEGC-----------KADLYTYSVLLQALCKQ-KKLNEALSILDQMT 657
Query: 249 VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLE 308
V GV+ N ++ + +G + L + M G Y+ IS Y K+G +E
Sbjct: 658 VSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIE 717
Query: 309 SASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNV-KGLANL------------- 352
A I G ME+ + + TY + G G + + + L
Sbjct: 718 EAEHLI------GEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCW 771
Query: 353 -------------IIEAQKLEPSGI-----------VVDRSVGFG----------IISAC 378
+I A ++ SG+ +++R + G II+
Sbjct: 772 TYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGF 831
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
++A +LD M S +Y +K C +A V D+ G Q +
Sbjct: 832 CKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQL 891
Query: 439 GNYDALIEASITSQDFQSAFSLFRDM 464
+Y LI D+ A SLF D+
Sbjct: 892 ESYHYLIVGLCDEGDYDRAKSLFCDL 917
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 137/339 (40%), Gaps = 54/339 (15%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ A V + M G P++ + +A Y G + M E G +V Y +
Sbjct: 145 IGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHA 204
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
++ GY ++G E A + + +++ S TY +VKG+ + G ++ ++
Sbjct: 205 VMDGYCRIGQTEVARKLL------HSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVK 258
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
E ++ E IV+D +I+ G + A+ + DEM G V + VY + YC
Sbjct: 259 EIKENEK--IVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYC 316
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEA----SITSQDFQSAFSLFRDMREARIY 470
K R E +L+ G+ LD +Y+ L++ ++ F++ + R+
Sbjct: 317 KLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRN------- 369
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
G+ LT +N++++ FC G ++DA +
Sbjct: 370 GFTGTTLT---------------------------------YNTLLNGFCSRGAIDDALK 396
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
M+ PN+ + +L++G+ A + L +W E
Sbjct: 397 LWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKE 435
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 88/200 (44%), Gaps = 7/200 (3%)
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
KAYC++ R A A + ++ GL +++ Y A+++ + A L ++ +
Sbjct: 172 KAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLS 231
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+Y ++ G + R E + E+ E+ ++ + + ++I+ +C+ GR+EDA R
Sbjct: 232 PNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANR 291
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVD 590
MI + N Y ++INGY L E+++ + + +G+ + +
Sbjct: 292 VRDEMIDAGVQVNMFVYNTMINGYCK-------LGRMGEVEKLLQANEYRGVNLDEYSYN 344
Query: 591 AFLYALVKGGFFDAVMQVVE 610
+ + GF + +
Sbjct: 345 TLVDGYCRKGFMTKAFETCD 364
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 142/385 (36%), Gaps = 69/385 (17%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
ENL F+ P++ N+ + G QS + +E MS G+ PN ++G L + +G
Sbjct: 507 ENLGFV-PSVEMFNSFITGLFIAKQSGKVNDIRVE-MSAKGLSPNTVTYGALIAGWCKEG 564
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT----------------- 313
L M E G + S L+S + + G ++ A+
Sbjct: 565 NLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSAST 624
Query: 314 --------ILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV 365
I+ L GGN + + K + V+ G + G V NL + L+ G +
Sbjct: 625 LNIGKVAHIIESLAGGNHQSA---KIMWNIVILGLCKLGRVADARNLF---EDLKVKGFI 678
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
D +I C G D A + DEM + + + Y + CK + A L
Sbjct: 679 PDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSL 738
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ S G+ + Y+ LI+ + AF L + M + I +Y ++ GL
Sbjct: 739 FNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGL-- 796
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
C G +E+A + L +MI +PN
Sbjct: 797 ----------------------------------CTQGYMEEAIKLLDQMIENNVDPNFI 822
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEI 570
TY +LI GY ++ +++E+
Sbjct: 823 TYWTLIQGYARCGNMKAITKLYNEM 847
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 182/431 (42%), Gaps = 37/431 (8%)
Query: 197 FLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
FLK EE + LD NL A +A ++G C + A K++ ++ V G+ PN
Sbjct: 186 FLKEMEE---MGLDVNL-------VAYHAVMDGYCR-IGQTEVARKLLHSLQVKGLSPNV 234
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF----YSSLISGYVKLGNLESASR 312
++ L Y +G E E E ++ E + ++V Y +LI+GY + G +E A+R
Sbjct: 235 VTYTLLVKGYCKEGRME---EAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANR 291
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
+ G ++ + F Y ++ G+ + G + + L+ Q E G+ +D
Sbjct: 292 VRDEMIDAG-VQVNMF---VYNTMINGYCKLGRMGEVEKLL---QANEYRGVNLDEYSYN 344
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
++ G KA D M G + Y L +C +A +L +
Sbjct: 345 TLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKR 404
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G+ + + L++ + + A +L+++ + + T++ GL +N R
Sbjct: 405 GVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMT-E 463
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
A L +++ + + ++I +CK G L A + M L F P+ + + S I
Sbjct: 464 AEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFIT 523
Query: 553 GYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVK-GGFFDAVM---QV 608
G A+Q V ++I+ ++S KG+ A + K G DA + ++
Sbjct: 524 GLFIAKQSGKV----NDIRVEMSA---KGLSPNTVTYGALIAGWCKEGNLHDACILYFEM 576
Query: 609 VEKSQEMKVFV 619
VEK + +F+
Sbjct: 577 VEKGLKPNLFI 587
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 129/314 (41%), Gaps = 51/314 (16%)
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYC 334
EL M E+ + Y +LI GY KLG+L A++ + ME F S E +
Sbjct: 466 ELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRI------EMENLGFVPSVEMFN 519
Query: 335 EVVKGFL---QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+ G Q+G V + + + A+ L P+ + + G I C L D A +
Sbjct: 520 SFITGLFIAKQSGKVNDI-RVEMSAKGLSPNTV----TYGALIAGWCKEGNLHD-ACILY 573
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEA---------TQLVMDISSSGLQLDVGNYD 442
EM G L + + + +E + EA T ++ D S+S L++G
Sbjct: 574 FEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSAS--TLNIGKVA 631
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
+IE S+ + QSA K + ++ GL + R A + ED
Sbjct: 632 HIIE-SLAGGNHQSA---------------KIMWNIVILGLCKLGR----VADARNLFED 671
Query: 503 PRVEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+V+ D ++S+IH +G ++ A M+ + PN TY SLI G +
Sbjct: 672 LKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCN 731
Query: 560 YFSVLMMWHEIKRK 573
+ ++++++ K
Sbjct: 732 VSRAVSLFNKLQSK 745
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 27/279 (9%)
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
+V ++ + G+ G E A + I +G G + + TY EV+ GFL N + +
Sbjct: 456 NVVSFARCLCGF---GKFEKAYKVIHEMMGNGFVPDT----STYSEVI-GFLCNAS--RV 505
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
N ++++ +G+V D +I G+ +AH+ LDEM GC + Y
Sbjct: 506 ENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTL 565
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR-EAR 468
+ AY K + + A +L + + G +V Y ALI+ S + + A ++ MR +A
Sbjct: 566 IHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDAD 625
Query: 469 IYDLKG---------------SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
I D+ +Y ++ GL + H+ + L+ + D E T ++
Sbjct: 626 IPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDG-CEPNTIVYD 684
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++I FCKA +L++A+ +M+ + PN TY SLI+
Sbjct: 685 ALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLID 723
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 133/358 (37%), Gaps = 48/358 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN+ A ++G C V DA ++ETM V G PN + L + ++
Sbjct: 642 KPNVVTYGALVDGLCKA-HKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQ 700
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
E+ M E G++ + YSSLI K L+ + V
Sbjct: 701 EVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLK-----------------------V 737
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ L+N N++I + +I + +D+A+ ++ M
Sbjct: 738 LSKMLENSCA---PNIVIYTE----------------MIDGLSKVAKTDEAYKLMLMMEE 778
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
GC + Y + + K + + +L ++ S G + Y LI +
Sbjct: 779 KGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDE 838
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A++L +M++ SY ++ G R +++ L E VE + +I
Sbjct: 839 AYALLEEMKQTYWPKHVSSYCKVIEGY---KREFILSLGLLEEVEKNGSAPIILLYKVLI 895
Query: 517 HAFCKAGRLEDAKRTLRRMI--FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
F KAGRLE A + +I + Y SLI + A + +++++ R
Sbjct: 896 DNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIR 953
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 147/356 (41%), Gaps = 42/356 (11%)
Query: 221 YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
+ CNA+ V +A + + M GV P+ ++ L ++ G+ ++
Sbjct: 498 FLCNAS---------RVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 548
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
M G +V Y++LI Y+K + A+ L + G TY ++ G+
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVI----TYTALIDGY 604
Query: 341 LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
++GN++ + ++ + D + F I +++ ++ N
Sbjct: 605 CKSGNIEKACQIY---ARMRGDADIPDVDMYFKI------------KNNVAEKPNV---- 645
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
V G V L CK H+ +A L+ + G + + YDALI+ + A +
Sbjct: 646 VTYGALVDGL---CKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIH 517
F M E +Y +++ L ++ R +L+ L +++E+ P + + + +I
Sbjct: 703 FHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVI----YTEMID 758
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
K + ++A + + M +PN TY ++I+G+ A + L ++ E+ K
Sbjct: 759 GLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSK 814
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 157/434 (36%), Gaps = 53/434 (12%)
Query: 137 PKLLDFQTVHTLLGSMRNANTA---APAFALVKCM-----FKNRYFMPFELWGGFLVDIC 188
P + F+ M +A T + +C+ F+ Y + E+ G V
Sbjct: 430 PGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDT 489
Query: 189 RKNSNFVAFLKVFEECCRIALDENLDFM---------KPNIYACNAALEGCCYGLQSVSD 239
S + FL C + EN F+ P++Y ++ C +
Sbjct: 490 STYSEVIGFL------CNASRVENAFFLFKEMKGTGVVPDVYTYTILID-CFSKAGIIKQ 542
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV-ELESLMNEFGFSSQMVFYSSLI 298
A ++ M G P ++ L + Y LK + + EL LM G ++ Y++LI
Sbjct: 543 AHNWLDEMVRDGCEPTVVTYTTLIHAY-LKAKKVSVANELFELMIAKGCFPNVITYTALI 601
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
GY K GN+E A + G ++ D F NV N++
Sbjct: 602 DGYCKSGNIEKACQIYARMRGDADIPDVDMY----------FKIKNNVAEKPNVVT---- 647
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
G +VD C + D A +L+ M GC VY + +CK +
Sbjct: 648 ---YGALVD--------GLCKAHKVKD-ARDLLETMFVDGCEPNTIVYDALIDGFCKAAK 695
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
EA ++ + G +V Y +LI+ + + M E Y
Sbjct: 696 LDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTE 755
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ GL + + + A L ++E+ + + ++I F KAG+++ R M
Sbjct: 756 MIDGLSKVAKTD-EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSK 814
Query: 539 QFEPNDQTYLSLIN 552
PN TY LIN
Sbjct: 815 GCAPNFVTYTVLIN 828
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 156/386 (40%), Gaps = 19/386 (4%)
Query: 193 NFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
N + L +E CR+ +PN+ ++G C + + A +++ M+ G
Sbjct: 308 NGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR-VGDLDGAVELVRKMTERGY 366
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
RPN ++ + +++ + E+ ++ +M + G + YS++ISG+ K G L A
Sbjct: 367 RPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHD 426
Query: 313 TILLCLGGGNMEQSDFSKETYC--EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
+ M + + C ++ + + L+ + ++ + VV S+
Sbjct: 427 LL------EQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSI 480
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
+I A +A S LD M C + Y + CK R +A L +
Sbjct: 481 ---LIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR 537
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
++G+ DV Y +I + + SAF + M+EA+ +Y ++ GL + +
Sbjct: 538 AAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVD 597
Query: 491 LMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
E++ P + +N++I CK ++E A L M P+ TY
Sbjct: 598 KAFDVFQEMLGCGCAPNLVT----YNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITY 653
Query: 548 LSLINGYVTAEQYFSVLMMWHEIKRK 573
LING A + + E+K K
Sbjct: 654 TCLINGLCNASRLEEAWRVLREMKDK 679
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 148/347 (42%), Gaps = 23/347 (6%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKI 275
PN+++ N L G C V +A ++E M G P+ ++Y + GL +++
Sbjct: 263 PNVFSYNTVLHGFCKA-NRVENALWLLEQMVTRGCPPD-----VVSYTTVINGLCKLDQV 316
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
E +M++ G ++ Y +L+ G+ ++G+L+ A + M + +
Sbjct: 317 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR------KMTERGYRPNA 370
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY ++ F + +++ ++ Q + +G D IIS G +AH +
Sbjct: 371 ITYNNIMHVFCRRNDMERAHQVL---QMMIQTGCPPDAINYSTIISGFCKAGKLREAHDL 427
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L++M GC + + A CK A +L+ DV Y LI A
Sbjct: 428 LEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCK 487
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
++ A S M + R Y +Y +++ GL ++ R A L + + V
Sbjct: 488 AKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRIN-DAFLLFDRMRAAGVMPDVV 546
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
++ +IH+FCK L+ A + L RM + P+ TY +LING A
Sbjct: 547 TYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKA 593
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 135/319 (42%), Gaps = 13/319 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V DA +++E M G PN ++ L + G ++ L M G S +V Y++
Sbjct: 964 VDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 1023
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK---GLANLI 353
+I G+ KLG ++ A + + GG TY ++ F + G + GL ++
Sbjct: 1024 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNV----VTYTVLLDAFCKCGKAEDAIGLVEVM 1079
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+E G V + ++ ++A +L M GC + Y +
Sbjct: 1080 VE------KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGL 1133
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK + E L+ + S+ D+ ++ +I+A + A+ LF ++E+
Sbjct: 1134 CKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNL 1193
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y +++ GL ++ R + L E+ +N++I CK+ R++ A +
Sbjct: 1194 VTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFL 1253
Query: 534 RMIFLQFEPNDQTYLSLIN 552
+M+ P+D TY +I+
Sbjct: 1254 QMLSDGLAPDDVTYSIVIS 1272
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 155/392 (39%), Gaps = 58/392 (14%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ DA +++E M G PN S+ + + + E + L M G +V Y++
Sbjct: 246 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTT 305
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI- 353
+I+G KL ++ A R + M Q TY +V GF + G++ G L+
Sbjct: 306 VINGLCKLDQVDEACRVM------DKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359
Query: 354 -IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ + P+ I + I+ ++AH +L M GC Y +
Sbjct: 360 KMTERGYRPNAITYN-----NIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISG 414
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
+CK + EA L+ + G + DV LI+A + SA L R
Sbjct: 415 FCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLR---------- 464
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+ G+ + P+++A ++ +IHA CKA RL +A+ L
Sbjct: 465 ------MSIGM--DCAPDVVA------------------YSILIHALCKAKRLPEAESWL 498
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAF 592
M+ + P+ TY S+++G + + +++ ++ G+ +
Sbjct: 499 DVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR-------AAGVMPDVVTYSIV 551
Query: 593 LYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+++ K D+ +++E+ +E K D Y
Sbjct: 552 IHSFCKDNNLDSAFKMLERMKEAKCVPDVVTY 583
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 153/368 (41%), Gaps = 38/368 (10%)
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
++ CR+ D PN+ ++ L G C + +A +++ M+ G PN ++
Sbjct: 965 DDACRLVEDMVSKGCSPNVVTYSSLLHGLCKA-GKLDEATALLQRMTRSGCSPNIVTYNT 1023
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+ + G ++ L M + G +V Y+ L+ + K G E A + + + G
Sbjct: 1024 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 1083
Query: 322 --------NMEQSDFSK----ETYCEVVKGFLQNGNVKGLA--NLIIEAQKLEPSGIVVD 367
N F K E C+++ +Q G V + N +I +G+
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI-------AGLCKA 1136
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
V G++ +L++M + C + + + A CK +R A +L
Sbjct: 1137 TKVHEGVL--------------LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN 1182
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLMEN 486
I SG ++ Y++L+ S+ F A L R+M R+ +Y T++ GL ++
Sbjct: 1183 LIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKS 1242
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
R + +++ D + ++ +I + CK +++A L M+ F+P T
Sbjct: 1243 KRVDRAYKLFLQMLSDG-LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAIT 1301
Query: 547 YLSLINGY 554
Y +LI+G+
Sbjct: 1302 YGTLIDGF 1309
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 134/340 (39%), Gaps = 30/340 (8%)
Query: 251 GVRPNESSFGFLAY-----------------LYALKGLQEKIVELESLMNEFGFSSQMVF 293
GVR +++ GF + L AL L+ L+ N+ S M
Sbjct: 820 GVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFT 879
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE--VVKGFLQNGNVKGLAN 351
++ LI G + G++ +A + M + + V+KG +
Sbjct: 880 FTILIHGLCRAGDIGTAYELL------KEMPRHGVPQNVILHNVVIKGLCSARKLDSALE 933
Query: 352 LIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
L E +E SG + I+ + V G D A ++++M + GCS + Y L
Sbjct: 934 LFKE---MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLL 990
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
CK + EAT L+ ++ SG ++ Y+ +I+ A+ L +M +
Sbjct: 991 HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ 1050
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+Y ++ + + E ++ +VE V +NS++ FCK +E A +
Sbjct: 1051 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP-NLFTYNSLLDMFCKKDEVERACQ 1109
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
L MI PN +Y ++I G A + +++ ++
Sbjct: 1110 LLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 1149
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + + + + A +L +++ GL+ G + +++ + A FR+M
Sbjct: 164 YSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS 223
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKA 522
+ D +Y T++ GL ++ R + L+E+V++ P V +N+++H FCKA
Sbjct: 224 KTCPPD-SVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNV----FSYNTVLHGFCKA 278
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGI 582
R+E+A L +M+ P+ +Y ++ING +Q + + + I Q +
Sbjct: 279 NRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRV---MDKMIQRGCQPNV 335
Query: 583 KFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
LVD F + G D +++V K E
Sbjct: 336 ITYGTLVDGF----CRVGDLDGAVELVRKMTE 363
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/284 (19%), Positives = 118/284 (41%), Gaps = 10/284 (3%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY-LYALKGLQEKI 275
+P++ + ++ C ++ A++++ + P+ ++ L + L K L E
Sbjct: 437 RPDVACLSTLIDALCKA-AAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAE 495
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L+ ++ + +V Y+S++ G K + A G M TY
Sbjct: 496 SWLDVMVKNRCYPD-VVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDV----VTYSI 550
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V+ F ++ N+ ++ ++++ + V D +I+ G DKA + EM
Sbjct: 551 VIHSFCKDNNLDSAFKML---ERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEML 607
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
CGC+ L Y + CK ++ +A +++ + D Y LI + +
Sbjct: 608 GCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLE 667
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
A+ + R+M++ + +Y T++ L + + EL+ L E+
Sbjct: 668 EAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 12/217 (5%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+IS + G A+ + DEMN G GV+ L+ C + ++A ++S +
Sbjct: 167 LISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT- 225
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
D Y+ +I S A L +M + SY T++ G + +R E
Sbjct: 226 CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENAL 285
Query: 494 AFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
L+++V P V + ++I+ CK ++++A R + +MI +PN TY +L
Sbjct: 286 WLLEQMVTRGCPPDVV----SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTL 341
Query: 551 INGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN 587
++G+ + E+ RK++ G + +N
Sbjct: 342 VDGFCRVGDLDGAV----ELVRKMTERGYRPNAITYN 374
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 160/435 (36%), Gaps = 72/435 (16%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PNI N ++G C L + +A ++E M G +PN ++ L + G E +
Sbjct: 1016 PNIVTYNTIIDGHC-KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 1074
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG--------NMEQSDFS 329
L +M E G+ + Y+SL+ + K +E A + + + G N +
Sbjct: 1075 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 1134
Query: 330 KETYCE----VVKGFLQNGNVKGLA--NLIIEA--------------QKLEPSGIVVDRS 369
K T +++ L N V + N II+A ++ SG +
Sbjct: 1135 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 1194
Query: 370 VGFGIISACVNLGLSDKAHSILDEMN-ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
++ D+A +L EM GCS + Y + CK R A +L +
Sbjct: 1195 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 1254
Query: 429 ISSSGLQLDVGNYDALIEA-------------------------SITSQDFQSAFSLFRD 463
+ S GL D Y +I + +IT F +
Sbjct: 1255 MLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGN 1314
Query: 464 MREA-RIYDL---KGSYLTIMT------GLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ +A I L KGSY ++T L + R L+ ++ V T +N
Sbjct: 1315 LDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP-DTVTYN 1373
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+++ FC A EDA M EP++ TY +L+ V + Y +L E+ +
Sbjct: 1374 TLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLA---EVSKS 1430
Query: 574 ISTDGQKGIKFEHNL 588
+ G K H L
Sbjct: 1431 MV---DTGFKLNHEL 1442
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 130/358 (36%), Gaps = 50/358 (13%)
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN 343
E + V YS+LISG+++ G + A G + K +++G
Sbjct: 154 EGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHK----SILRGLCDA 209
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
G E K P V ++ G+ + D A +L+EM G + +
Sbjct: 210 GQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKS----DRLDDAIRLLEEMVDNGFAPNV 265
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y L +CK +R A L+ + + G DV +Y +I A +
Sbjct: 266 FSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDK 325
Query: 464 MRE-----------------ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
M + R+ DL G+ + +RP +
Sbjct: 326 MIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAIT------------- 372
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+N+I+H FC+ +E A + L+ MI P+ Y ++I+G+ A + L
Sbjct: 373 -----YNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGK----LRE 423
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
H++ ++ ++G + + + + AL K D+ +++ S M D Y
Sbjct: 424 AHDLLEQMI---RRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAY 478
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 154/391 (39%), Gaps = 44/391 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ A NA L S+ A + + +M GV PN ++ L +G E+ V
Sbjct: 116 PSVPAYNAVLLA--LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVG 173
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M G + V Y++L++ + + G L+ A R + L GN + + T+ +V
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLV---TFNSMV 230
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + G ++G + E + G+ D ++S +G ++ ++ EM
Sbjct: 231 NGLCKAGRMEGARKVFDEMVR---EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR 287
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + + + A CK +A LV + GL+++ + ALI+ A
Sbjct: 288 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA 347
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+MR+ I Y ++ G + R +L + E+ E RV+ +++II
Sbjct: 348 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM-EAKRVKPDVVTYSTIIS 406
Query: 518 AFCKAG-----------------------------------RLEDAKRTLRRMIFLQFEP 542
+CK G RL DA M+ L +P
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++ TY +LI+G+ L + E+ RK
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 497
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 147/359 (40%), Gaps = 18/359 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG-VRPNESSFGFLAYLYALKGLQEKIV 276
PN N + C + + AE+V+ M G +PN +F + G E
Sbjct: 185 PNAVTYNTLVAAFCRAGE-LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 243
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
++ M G + +V Y++L+SGY K+G L + M Q + T+
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF------SEMTQRGLVPDVVTFT 297
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ + GN++ L+ + ++ G+ ++ +I G D A ++EM
Sbjct: 298 SLIHATCKAGNLEQAVALVAQMRE---RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
CG + Y + YCK R A +L+ ++ + ++ DV Y +I +
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
SAF L + M + + +Y +++ GL E R + +++ V+ + +
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ-LGVQPDEFTYTT 473
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV----TAEQYFSVLMMWHE 569
+I CK G +E A MI P+ TY LING T E + + ++HE
Sbjct: 474 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHE 532
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 164/375 (43%), Gaps = 39/375 (10%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
KVF+E R + + P++ + N L G C + + ++ V M+ G+ P+ +
Sbjct: 244 KVFDEMVR-------EGLAPDVVSYNTLLSGYCK-VGCLHESLAVFSEMTQRGLVPDVVT 295
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
F L + G E+ V L + M E G V +++LI G+ K G L+ A L
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA------LL 349
Query: 319 GGGNMEQSDFSKETYC--EVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGI 374
M + C ++ G+ + G + LI +EA++++P VV S I
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD--VVTYST---I 404
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
IS +G D A + +M G Y ++ C+E R +A +L ++ G+
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENHRPELMA 493
Q D Y LI+ + + A SL +M R+ + D+ +Y ++ GL ++ R +
Sbjct: 465 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV-TYSVLINGLSKSARTKEAH 523
Query: 494 AFLDEVV-EDPRVEVKTHD----------WNSII---HAFCKAGRLEDAKRTLRRMIFLQ 539
L ++ EDP + +D + S++ FC G +++A + + M+
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583
Query: 540 FEPNDQTYLSLINGY 554
++ + Y LI+G+
Sbjct: 584 WKLDGSVYSILIHGH 598
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 94/462 (20%), Positives = 171/462 (37%), Gaps = 45/462 (9%)
Query: 59 QQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQD 118
+++ + N+ + + ++ + A K F + L P N+L++ +
Sbjct: 214 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGC 273
Query: 119 NHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFE 178
H F+ + + + D T +L+ + A A ALV M + M
Sbjct: 274 LHESLAVFSEMT----QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329
Query: 179 LWGGFLVDICRKNSNFVAFLKVFE-ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSV 237
+ + C+K A L V E C I +P++ NA + G C L +
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGI---------QPSVVCYNALINGYCK-LGRM 379
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
A ++I M V+P+ ++ + Y G + +L M + G + YSSL
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 439
Query: 298 ISGYVKLGNLESASRTI--LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
I G + L A +L LG ++ +F TY ++ G + GNV+ +L E
Sbjct: 440 IRGLCEEKRLNDACELFENMLQLG---VQPDEF---TYTTLIDGHCKEGNVEKALSLHDE 493
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL---------------DEMNACGCS 400
+ G++ D +I+ + +AH +L D + C
Sbjct: 494 MIR---KGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK 550
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
V LK +C + EA ++ + +LD Y LI + + A S
Sbjct: 551 AEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSF 610
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
+ M + S ++++ GL E E M D ++D
Sbjct: 611 HKQMLRSGFSPNSTSTISLVRGLFE----EGMVVEADNAIQD 648
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 120/546 (21%), Positives = 213/546 (39%), Gaps = 44/546 (8%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVH 146
A +F LT L P +L L L +H + A + P +L F T
Sbjct: 135 ALSTFGKLTKLGLHPDVVTFTTL---LHGLCLDHRVSEALDLFHQICR--PDVLTFTT-- 187
Query: 147 TLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCR 206
L+ + A AL+ M +N P ++ G VD K + V+ L + +
Sbjct: 188 -LMNGLCREGRVVEAVALLDRMVENG-LQPDQITYGTFVDGMCKMGDTVSALNLLRKM-- 243
Query: 207 IALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
E + +KPN+ +A ++G C + SD+ + M G+ PN ++ + +
Sbjct: 244 ----EEISHIKPNVVIYSAIIDGLCKDGRH-SDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
+ G L M E S +V Y++LI+ +VK G A+ L G + +
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
TY ++ GF + + ++ + G D +I D
Sbjct: 359 ----ITYNSMIDGFCKQDRLDAAEDMF---YLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
+L EM G Y + +C A L + SSG+ D+ + L++
Sbjct: 412 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 471
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGS------------YLTIMTGLMENHRPELMAA 494
+ + A +F+ M+++++ DL S Y ++ GL+ N L A
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKM-DLDASHPFNGVEPDVLTYNILICGLI-NEGKFLEAE 529
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
L E + + T ++S+I CK RL++A + M F PN T+ +LINGY
Sbjct: 530 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGY 589
Query: 555 VTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
A + L ++ E+ G++GI + + +Y K G + + + ++
Sbjct: 590 CKAGRVDDGLELFCEM-------GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642
Query: 615 MKVFVD 620
V+ D
Sbjct: 643 SGVYPD 648
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 112/299 (37%), Gaps = 31/299 (10%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ ++G C G + + D +++ M G+ N ++ L + + L G ++
Sbjct: 391 PDVFTFTTLIDGYC-GAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD 449
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE------ 331
L M G +V ++L+ G G L+ A M++S +
Sbjct: 450 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF------KAMQKSKMDLDASHPFN 503
Query: 332 -------TYCEVVKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVN 380
TY ++ G + G +EA++L GIV D +I
Sbjct: 504 GVEPDVLTYNILICGLINEGK-------FLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 556
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
D+A + M + S + + + YCK R + +L ++ G+ D
Sbjct: 557 QSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII 616
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y LI + A +F++M + +Y + ++TG E A L+++
Sbjct: 617 YITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
L+L G+Y+ + + A LF DM +R + +M ++ RP+L+
Sbjct: 50 LKLRSGSYEI--------KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVI 101
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ L + +E ++ + + +I FC +L A T ++ L P+ T+ +L++G
Sbjct: 102 S-LYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHG 160
Query: 554 YVTAEQYFSVLMMWHEIKR 572
+ L ++H+I R
Sbjct: 161 LCLDHRVSEALDLFHQICR 179
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 186/433 (42%), Gaps = 36/433 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN++ N ++ C + V +A + M +G P+ ++ L Y G E++ +
Sbjct: 198 PNVFTFNIVIDFLCKEGELV-EARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQ 256
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
L S M + G ++ +V Y++LI+ + K G +E A G M++ T+
Sbjct: 257 LVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYF------GEMKRQGVVANVVTFST 310
Query: 336 VVKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
V F + G L+ EA KL G++ + ++ G D A +L
Sbjct: 311 FVDAFCKEG-------LVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLL 363
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
DEM G + Y + CKE + AEA ++ + G++ + Y LI +
Sbjct: 364 DEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMN 423
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ + A L M+ + Y T++ GL ++ + + + L ++ + T
Sbjct: 424 NNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMA-GCGLRPNTVI 482
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+ +I+ A KAG+ +A L +++ F+PN TY +LI+G A + ++++
Sbjct: 483 YTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKM- 541
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY------- 624
R++ D ++ L+D F K G + M ++ + + + +DK Y
Sbjct: 542 RELGLD--PNVQAYTALIDGF----CKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGY 595
Query: 625 -KQAFMENHKKLK 636
KQA +++ LK
Sbjct: 596 MKQANLQDAFALK 608
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 166/430 (38%), Gaps = 80/430 (18%)
Query: 132 VIEKNPKLLDFQTVHTLLGSMRNANTAAPAF---ALVKCMFKNRYFMPFELWGGFLVDIC 188
+I+ K D + V L+ MR + AA AL+ C K F E + ++
Sbjct: 241 LIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSK---FGRMEKAYSYFGEMK 297
Query: 189 RKN--SNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIET 246
R+ +N V F + C+ L V +A K+
Sbjct: 298 RQGVVANVVTFSTFVDAFCKEGL---------------------------VQEAMKLFAQ 330
Query: 247 MSVLGVRPNESSFGFLAYLYALKG-LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M V G+ PNE ++ L G L + IV L+ ++++ G +V Y+ ++ G K G
Sbjct: 331 MRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ-GLVPNVVTYTVMVDGLCKEG 389
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV 365
+ A + L GG ++ Y ++ G N N + +L+ +++ G+
Sbjct: 390 KVAEADNVLSLMERGG----VKANELLYTTLIHGHFMNNNSERALDLL---NQMKNKGME 442
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+D S+ +I D+A S+L +M CG +Y + A K + +EA L
Sbjct: 443 LDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVAL 502
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ I SG Q +V Y ALI+ + A S F MRE GL
Sbjct: 503 LHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRE--------------LGL-- 546
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
DP V+ + ++I FCK G L A + MI +
Sbjct: 547 ----------------DPNVQA----YTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKV 586
Query: 546 TYLSLINGYV 555
Y SLI+GY+
Sbjct: 587 VYTSLIDGYM 596
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 109/279 (39%), Gaps = 37/279 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ ++G C V++A+ V+ M GV+ NE + L + + + E+ ++
Sbjct: 373 PNVVTYTVMVDGLCKE-GKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALD 431
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--------- 328
L + M G + Y +LI G K ++ A +++L + G + +
Sbjct: 432 LLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEA-KSLLHKMAGCGLRPNTVIYTTIMDAL 490
Query: 329 ---SKE--------------------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV 365
KE TYC ++ G + G++ + I K+ G+
Sbjct: 491 FKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSI---SEAISHFNKMRELGLD 547
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+ +I +G +KA +++EM G S+ VY + Y K+ +A L
Sbjct: 548 PNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFAL 607
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
+ SGLQLD+ Y I Q A + +M
Sbjct: 608 KTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEM 646
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ A ++G C S+S+A M LG+ PN ++ L + G K +
Sbjct: 512 QPNVVTYCALIDGLCKA-GSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAM 570
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L + M + G S V Y+SLI GY+K NL+ A M +S + YC
Sbjct: 571 HLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFAL------KTKMIESGLQLDLYCYT 624
Query: 337 --VKGFLQNGNVKGLANLIIEAQ----KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
+ GF N++ EA+ ++ +GI D++V +I LG ++A S+
Sbjct: 625 CFISGFCN-------MNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSL 677
Query: 391 LDEMNA 396
+EM +
Sbjct: 678 QNEMES 683
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 141/334 (42%), Gaps = 24/334 (7%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y+++++GY + G LESA R + TY VV+ G + A+ +
Sbjct: 130 YNAMVAGYCRAGQLESARRL-------AAAVPVPPNAYTYFPVVRALCARGRI---ADAL 179
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
++ G + I+ A G A +L++++A GC++ +G L A
Sbjct: 180 AVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAI 239
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C + EA L+ D+ S G + DV +Y+A+++ ++ + L +M
Sbjct: 240 CDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNI 299
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
++ T+++ L N E + L ++VE P + + + +II CK G LE A
Sbjct: 300 VTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRM----YATIIDGICKEGHLEVAHE 355
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVD 590
L RM +PN Y +L+ G +AE+ W E + ++ K + +
Sbjct: 356 ILNRMPSYGLKPNVVCYNTLLKGLCSAER-------WEETEELLAEMFDKDCPLDDVTFN 408
Query: 591 AFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ + G D V++++E+ E D Y
Sbjct: 409 ILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITY 442
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 163/426 (38%), Gaps = 77/426 (18%)
Query: 204 CCRIALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
C + ++DE L ++ P++ + NA L+G C + ++++E M + PN
Sbjct: 240 CDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMA-KRWGCVQELMEEMVRMACPPN 298
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI- 314
+F L GL E++ E+ + M E G + + Y+++I G K G+LE A +
Sbjct: 299 IVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILN 358
Query: 315 ----------LLCL-----GGGNMEQSDFSKETYCE---------------VVKGFLQNG 344
++C G + E+ + ++E E +V F QNG
Sbjct: 359 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 418
Query: 345 NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
V + L+ Q LE G + D +I+ GL D+A +L M ACGC
Sbjct: 419 LVDRVIELL--EQMLE-HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTI 475
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y LK C R +A L+ + G L+ ++ LI + A L + M
Sbjct: 476 SYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 535
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV------------------------ 500
SY T++ GL + + + L+ +V
Sbjct: 536 LVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRI 595
Query: 501 ----------EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+D + +N++I + CK G E A L M+ PN+ TY L
Sbjct: 596 NKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTIL 655
Query: 551 INGYVT 556
I G +
Sbjct: 656 IRGLAS 661
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 114/233 (48%), Gaps = 14/233 (6%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
GL ++ H +L +M GC+ + +Y + CKE A +++ + S GL+ +V Y
Sbjct: 313 GLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCY 372
Query: 442 DALIEASITSQDFQSAFSLFRDM--REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
+ L++ +++ ++ L +M ++ + D+ ++ ++ +N + + L+++
Sbjct: 373 NTLLKGLCSAERWEETEELLAEMFDKDCPLDDV--TFNILVDFFCQNGLVDRVIELLEQM 430
Query: 500 VEDPRV-EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+E + +V T + ++I+ FCK G +++A L+ M +PN +Y ++ G +AE
Sbjct: 431 LEHGCMPDVIT--YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAE 488
Query: 559 QYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
+ W + + +S Q+G + + L K G + ++++++
Sbjct: 489 R-------WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 534
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 12/219 (5%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN + L+G C + V DAE ++ M G N +F L KGL E+ +
Sbjct: 471 KPNTISYTIVLKGLCSAERWV-DAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 529
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
EL M G S ++ YS++I G K G + A + + M S T Y
Sbjct: 530 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNV------MVNKGMSPNTIIYS 583
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+ + G + + + ++ + I D + +IS+ G +++A L M
Sbjct: 584 SIASALSREGRINKVIQMF---DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 640
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+ GC Y ++ E EA +++ ++ S G
Sbjct: 641 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 151/365 (41%), Gaps = 18/365 (4%)
Query: 218 PNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P + N + G C +G VSDA K+++ M + P+ S+ L Y Y G I
Sbjct: 305 PTVVTYNTIMYGLCKWG--RVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLG---NIG 359
Query: 277 ELESLMNEFGFSS---QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
E L E + S +V Y++LI G +LG+L+ A R + G D T+
Sbjct: 360 EAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHG----PDPDVFTF 415
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
V+GF + GN+ L E G+ DR I + LG KA + +E
Sbjct: 416 TTFVRGFCKMGNLPMAKELFDEMLN---RGLQPDRFAYITRIVGELKLGDPSKAFGMQEE 472
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M A G L Y + K EA++LV + +GL D Y ++I A + +
Sbjct: 473 MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 532
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A +LF +M I+ +Y ++ R +L E+ E V +N
Sbjct: 533 LRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKG-VHPNVITYN 591
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKR 572
++I+ CK +++ A M PN TY LIN + L ++ + + R
Sbjct: 592 ALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDR 651
Query: 573 KISTD 577
+I D
Sbjct: 652 EIQPD 656
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 169/451 (37%), Gaps = 55/451 (12%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P + N L+ C V +A +++ M +G PN+ ++ L + G E+ E
Sbjct: 200 PTVVTYNTMLDSFCKK-GMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKE 258
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR------------------TIL--LC 317
L M G + Y LI GY + G +E ASR TI+ LC
Sbjct: 259 LIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLC 318
Query: 318 LGGGNMEQSDFSK--------------ETYCEVVKGFLQNGNVKGLANLI---IEAQKLE 360
G SD K +Y ++ G+ + GN+ G A L+ + + L
Sbjct: 319 KWG---RVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI-GEAFLLFAELRYRSLA 374
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
PS + + +I LG D A + DEM G + + ++ +CK
Sbjct: 375 PSVVTYNT-----LIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLP 429
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
A +L ++ + GLQ D Y I + D AF + +M +Y +
Sbjct: 430 MAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI 489
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL + + + + +++ + V + SIIHA AG L A+ M+
Sbjct: 490 DGLHKLGNLKEASELVKKMLYNGLVPDHV-TYTSIIHAHLMAGHLRKARALFLEMLSKGI 548
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
P+ TY LI+ Y + ++ + E+ +KG+ +A + L K
Sbjct: 549 FPSVVTYTVLIHSYAVRGRLKLAILHFFEMH-------EKGVHPNVITYNALINGLCKVR 601
Query: 601 FFDAVMQVVEKSQEMKVFVDKWKYKQAFMEN 631
D + Q + +K+ Y EN
Sbjct: 602 KMDQAYNFFAEMQAKGISPNKYTYTILINEN 632
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D A + + M CG + Y L ++CK+ EA QL+ + + G + Y+ L
Sbjct: 184 DVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVL 243
Query: 445 IEASITSQDFQSAFSLFRDM----REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
+ S + + A L +DM E +Y +Y ++ G E + E + +E++
Sbjct: 244 VNGLSHSGEMEQAKELIQDMLRLGLEVSVY----TYDPLIRGYCEKGQIEEASRLGEEML 299
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
V +N+I++ CK GR+ DA++ L M+ P+ +Y +LI GY
Sbjct: 300 SRGAVPTVV-TYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 358
Query: 561 FSVLMMWHEIKRK 573
+++ E++ +
Sbjct: 359 GEAFLLFAELRYR 371
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 146/345 (42%), Gaps = 31/345 (8%)
Query: 132 VIEKN--PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD-IC 188
++ KN P L+ + T+ + G R N AF L + R P + L+D +C
Sbjct: 333 MVNKNLMPDLVSYNTL--IYGYTRLGNIGE-AFLLF-AELRYRSLAPSVVTYNTLIDGLC 388
Query: 189 RKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMS 248
R VA +++ +E + D P+++ + G C + ++ A+++ + M
Sbjct: 389 RLGDLDVA-MRLKDEMIKHGPD-------PDVFTFTTFVRGFC-KMGNLPMAKELFDEML 439
Query: 249 VLGVRPNESSFGFLAYLYA-LK-GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
G++P+ F ++ + LK G K ++ M GF ++ Y+ I G KLGN
Sbjct: 440 NRGLQPDR--FAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGN 497
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGI 364
L+ AS + L G + TY ++ L G+++ L +E ++ + PS
Sbjct: 498 LKEASELVKKMLYNGLVP----DHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPS-- 551
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
VV +V +I + G A EM+ G + Y + CK + +A
Sbjct: 552 VVTYTV---LIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYN 608
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ + G+ + Y LI + +Q A L++DM + I
Sbjct: 609 FFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREI 653
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 168/404 (41%), Gaps = 56/404 (13%)
Query: 209 LDENLDFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
LDE L + P + ACNA L+G +S A ++ + M G+ P+ ++ L
Sbjct: 127 LDEALYVFRRLWTLPALPACNAVLDGLVKARRSRC-AWELFDEMLRRGMVPSVVTYNTLI 185
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+G K E+ M ++ Y+S+I + G + A R + + M
Sbjct: 186 NACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAER-LFDAMKEAGM 244
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ + TY ++ G Q +V + + Q+L SG++ + V
Sbjct: 245 RPNQY---TYNVLMSGHCQGDDVN---SAFVLYQELLNSGLIPNAVV------------- 285
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
+ + +CK R +EA + D+ G+ V Y++
Sbjct: 286 ----------------------FTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNS 323
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
L++ + S D Q A SL+++M + + + ++ GL + + ++ A FL+ V ED
Sbjct: 324 LMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVRED- 382
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
V + +N++I +C+ G LE+A T RM + EPN +Y SLI+G+ +
Sbjct: 383 GVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIA 442
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQ 607
+ ++ E+ KGI+ A ++ K G DA +
Sbjct: 443 MAIYTEMV-------AKGIEPNVVTYTALIHGHAKNGGIDAAFR 479
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 100/523 (19%), Positives = 202/523 (38%), Gaps = 63/523 (12%)
Query: 130 VYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICR 189
+YV + L + +L + A + A+ L M + R +P + L++ CR
Sbjct: 131 LYVFRRLWTLPALPACNAVLDGLVKARRSRCAWELFDEMLR-RGMVPSVVTYNTLINACR 189
Query: 190 KNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
+++++ +D N+ I C EGC + DAE++ + M
Sbjct: 190 YQGAVAKAQEMWDQMVARQIDPNVITYTSMI--CVLCEEGC------IGDAERLFDAMKE 241
Query: 250 LGVRPNESSFGFLAYLYAL-KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLE 308
G+RPN+ ++ L + + V + L+N G V +++LI G+ K
Sbjct: 242 AGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNS-GLIPNAVVFTTLIDGFCKAKRFS 300
Query: 309 SASRTILLCLGGGNMEQSDFSK--ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
A +M + + Y ++ G ++G+ + +L E +L G+
Sbjct: 301 EAKDMFR------DMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRL---GLCP 351
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D ++ + G A L+ + G ++ Y + YC+ EA
Sbjct: 352 DEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATC 411
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
++ G++ +V +Y +LI+ Q A +++ +M I +Y ++ G +N
Sbjct: 412 TRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKN 471
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE----- 541
+ F E++E+ + + ++ C+ R++DA R + +++
Sbjct: 472 GGIDAAFRFHKEMIEN-GISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSF 530
Query: 542 ------------PNDQTYLSLING-YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
PN Y++LI G Y+ + Y E + S + G+ +
Sbjct: 531 FSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHY--------EAGKLFSYMRKSGM-----I 577
Query: 589 VDAFLYALVKGG------FFDAVMQVVEKSQEMKVFVDKWKYK 625
D+F Y L+ G +A+M + MK+ V +YK
Sbjct: 578 SDSFTYTLLIRGQCMLGYVLNAMMLYADM---MKIGVKPMRYK 617
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 164/386 (42%), Gaps = 43/386 (11%)
Query: 204 CCRIALDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
C R +DE L + +P++ + + G C V A ++ + M + PN
Sbjct: 337 CKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQ-GKVQQAIQLYKEMCFNRIFPN 395
Query: 256 ESSFGFLAYLYALKGLQEK------IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
SF A+ LKGL EK + +SL+ + Y+ +I GYVKLG++E
Sbjct: 396 --SF---AHSGILKGLCEKGMLSDARMYFDSLIMS-NLRPDVTLYNIMIDGYVKLGDVEE 449
Query: 310 ASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIV 365
A R + + T+ ++ GF +N V L+ I+ LEPS +
Sbjct: 450 AVRLY------KRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVT 503
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+++A G +K H +L EMN + Y +K CK+ + E+ QL
Sbjct: 504 YT-----TLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQL 558
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ D+ + GL D Y+ +I+ ++D + AF L DM + +Y ++ GL
Sbjct: 559 LEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCR 618
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
E L ++D + + + ++I A C G + A + +M+ FE + +
Sbjct: 619 YGDVEDADRVLVS-LQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIK 677
Query: 546 TYLSLINGYVT------AEQYFSVLM 565
Y ++IN A+ YF +++
Sbjct: 678 DYSAVINRLCKRCLINEAKYYFCIML 703
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 127/586 (21%), Positives = 215/586 (36%), Gaps = 94/586 (16%)
Query: 72 ETNLHKSLLTNN--------TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLK 123
E NL S+ T N TD W + + +S P T+S+I D +
Sbjct: 111 EQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIK-DSGTPQSARTSSIIV------DGLCGQ 163
Query: 124 RAFASVVYVIEKN------PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPF 177
F V + +N P ++ F T+ + + A+ A F CM +P
Sbjct: 164 SRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFF----CMMLKYGILPD 219
Query: 178 ELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSV 237
L+ + VA EE + D ++P++ +G + L +
Sbjct: 220 TYSYNILI-----HGLIVA--GSMEEALELTNDMEKQGLQPDMVTYKIVAKGF-HLLGLM 271
Query: 238 SDAEKVIETM-SVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
S A ++I+ M + G++P+ ++ L + G E+ + L + GF ++ YS
Sbjct: 272 SGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSV 331
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
L+S K G ++ A + LL N Q D TY ++ G + G V+ L E
Sbjct: 332 LLSSLCKRGQVDEALQ--LLYEMEANNLQPDLV--TYSILIHGLCKQGKVQQAIQLYKEM 387
Query: 357 ----------------QKLEPSGIVVDRSVGFG----------------IISACVNLGLS 384
+ L G++ D + F +I V LG
Sbjct: 388 CFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDV 447
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
++A + + + + + + +CK + EA +L+ I GL+ Y L
Sbjct: 448 EEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTL 507
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
+ A + L +M I +Y ++ GL + + E L ED R
Sbjct: 508 MNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLL----EDMR 563
Query: 505 VEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING---YVTAE 558
+ D +N+II FCKA + A L M+ EP TY LI+G Y E
Sbjct: 564 AKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVE 623
Query: 559 QYFSVLMMWHE-------------IKRK-ISTDGQKGIKFEHNLVD 590
VL+ + IK + D Q+ +K H +V+
Sbjct: 624 DADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVE 669
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 111/523 (21%), Positives = 206/523 (39%), Gaps = 53/523 (10%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQ 143
D AWK F + AN L P + S+I L F +EKN ++
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH----LEKNRRVPCTY 309
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
+T++ +A A++L++ + + +P + ++ RK L+VFEE
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQ-RAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEE 368
Query: 204 ------------------CCRIA-LD---ENLDFMK-----PNIYACNAALEGCCYGLQS 236
CR LD E D M+ PN+ N ++ C Q
Sbjct: 369 MKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKS-QK 427
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ +A + E M P+E +F L G + ++ M + + + Y+S
Sbjct: 428 LDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTS 487
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-----TYCEVVKGFLQNGNVKGLAN 351
LI + G E + +M + S + TY + + F KG A
Sbjct: 488 LIKNFFNHGRKEDGHKIY------KDMVNQNCSPDLQLLNTYMDCM--FKAGEPEKGRAM 539
Query: 352 LI-IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
I++++ P RS +I + G +++ + + M GC + Y +
Sbjct: 540 FEEIKSRRFVPDA----RSYSI-LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
+CK + +A QL+ ++ + G + V Y ++I+ A+ LF + + RI
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
Y +++ G + R + L+E+++ + + WNS++ A KA + +A
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG-LTPNVYTWNSLLDALVKAEEINEALV 713
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ M L+ PN TY LING ++ + W E++++
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 171/460 (37%), Gaps = 55/460 (11%)
Query: 44 KSLQQDPPNSPTQQQQQQTLTQDNIT--SLETNLHKSLLTNNTDEAWKSFKSLTANSLFP 101
KS + D + +Q + T D IT SL L K D+A+K ++ + +
Sbjct: 424 KSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGK---VGRVDDAYKIYEKMLDSDCRT 480
Query: 102 SKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPA 161
+ V SLI + NH K + + D Q ++T + M A
Sbjct: 481 NSIVYTSLIKNFF----NHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 162 FALVKCMFKNRYFMP----FELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMK 217
A+ + K+R F+P + + L+ N + F + E+ C +
Sbjct: 537 RAMFE-EIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL---------- 585
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIV 276
+ A N ++G C V+ A +++E M G P ++G + L + L E +
Sbjct: 586 -DTRAYNIVIDGFC-KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
E ++ +V YSSLI G+ K+G ++ A + + Q + Y
Sbjct: 644 LFEEAKSK-RIELNVVIYSSLIDGFGKVGRIDEAYLIL------EELMQKGLTPNVY--- 693
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIV---------VDRSVGFGI-ISACVNLGLSDK 386
L + +++A+++ + + V +GI I+ + +K
Sbjct: 694 --------TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNK 745
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A EM G Y + K AEA L ++G D Y+A+IE
Sbjct: 746 AFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIE 805
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
AFSLF + R ++ + + ++ L +N
Sbjct: 806 GLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKN 845
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 154/409 (37%), Gaps = 57/409 (13%)
Query: 208 ALDENLDFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
ALD+ L M P++ C + C + + V++ M RP S++ L
Sbjct: 116 ALDQILGEMSVAGFGPSVNTCIEMVLSCVKA-NKLREGFDVVQNMRKFKFRPAFSAYTTL 174
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
++ + ++ L M E G+ + +++LI G+ K G ++SA +
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLL------DE 228
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
M+ S + L N+ I++ FG +G
Sbjct: 229 MKSSSLDADIV---------------LYNVCIDS---------------FG------KVG 252
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
D A E+ A G Y + CK +R EA ++ + + Y+
Sbjct: 253 KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYN 312
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
+I ++ F A+SL R +Y I+T L + + + +E+ +D
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKD 372
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+ T +N +I C+AG+L+ A M PN +T +++ +++
Sbjct: 373 AAPNLST--YNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 563 VLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
++ ++ K+ T + I F +L+D L K G D ++ EK
Sbjct: 431 ACAIFEQMDYKVCTPDE--ITF-CSLID----GLGKVGRVDDAYKIYEK 472
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 82/199 (41%), Gaps = 4/199 (2%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+++ C N D IL EM+ G + + + + K ++ E +V ++
Sbjct: 107 VMARCRNF---DALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFK 163
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ Y LI A +LF+ M+E + T++ G + R +
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ LDE+ + ++ +N I +F K G+++ A + + +P++ TY S+I
Sbjct: 224 SLLDEM-KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282
Query: 554 YVTAEQYFSVLMMWHEIKR 572
A + + M+ +++
Sbjct: 283 LCKANRLDEAVEMFEHLEK 301
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 138/337 (40%), Gaps = 44/337 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ NA + G C + A +++ M RPNE ++ L ++ + K +
Sbjct: 387 PSVVTYNALIRGYCEE-GRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMT 445
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L S M E + +V Y+SLI K G+ +SA + + L G + + TY +
Sbjct: 446 LLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPD----QWTYSVFI 501
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
++ ++ +L L+ GI + + +I G D+A S+L+ M++
Sbjct: 502 DTLCKSKRMEEACDLF---NSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSE 558
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
C Y + CKE + E +V ++S G++ V Y LIE + DF A
Sbjct: 559 DCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHA 618
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+F M + H+P++ + + + IH
Sbjct: 619 NRVFNQM------------------VSFGHKPDV------------------YTYTAFIH 642
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+C +G +++A+ + RMI P+ TY LI+ Y
Sbjct: 643 TYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAY 679
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 133/326 (40%), Gaps = 15/326 (4%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
G S Y+SLI GY + ++ SA + + G ++ +Y ++ G + G
Sbjct: 244 GLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRR----NEVSYTTIIHGLCEAGR 299
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
+ +L + ++ + V +V II A + + + +EM C +
Sbjct: 300 IDEGISLFKKMREDDCYPTVRTYTV---IIHALFGNDRNLEGMDLFNEMRERSCEPNVHT 356
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + A CKE + E+ +++ ++ GL V Y+ALI ++A + M
Sbjct: 357 YTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLME 416
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+ +Y ++ G + L +++E ++ +NS+IH CKAG
Sbjct: 417 SNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLES-KLTPSLVTYNSLIHVQCKAGHF 475
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFE 585
+ A + L + P+ TY I+ +++ +++ +K +KGIK
Sbjct: 476 DSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLK-------EKGIKAN 528
Query: 586 HNLVDAFLYALVKGGFFDAVMQVVEK 611
+ A + K G D + ++E+
Sbjct: 529 EVMYTALIDGHCKAGKIDEAISLLER 554
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 13/253 (5%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
I+ C N + + A+ + + M GC Y + C+ R E L +
Sbjct: 256 ILGYCRNNDV-NSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDD 314
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
V Y +I A + LF +MRE +Y ++ + + + +
Sbjct: 315 CYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESR 374
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
L+E++E V +N++I +C+ GR+E A L M PN++TY LI G
Sbjct: 375 RILNEMMEKGLVP-SVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICG 433
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV--DAFLYALVKGGFFDAVMQVVEK 611
+ + + + ++ K +LV ++ ++ K G FD+ ++++
Sbjct: 434 FSKRKHVHKAMTLLSKMLES---------KLTPSLVTYNSLIHVQCKAGHFDSAYKLLDL 484
Query: 612 SQEMKVFVDKWKY 624
+E + D+W Y
Sbjct: 485 LKENGLVPDQWTY 497
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 113/523 (21%), Positives = 206/523 (39%), Gaps = 53/523 (10%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQ 143
D AWK F + AN L P + S+I L F +EKN ++
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH----LEKNRRVPCTY 309
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
+T++ +A A++L++ + + +P + ++ RK LKVFEE
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQ-RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE 368
Query: 204 ------------------CCRIA-LD---ENLDFMK-----PNIYACNAALEGCCYGLQS 236
CR LD E D M+ PN+ N ++ C Q
Sbjct: 369 MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS-QK 427
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ +A + E M P+E +F L G + ++ M + + + Y+S
Sbjct: 428 LDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-----TYCEVVKGFLQNGNVKGLAN 351
LI + G E + +M + S + TY + + F KG A
Sbjct: 488 LIKNFFNHGRKEDGHKIY------KDMINQNCSPDLQLLNTYMDCM--FKAGEPEKGRAM 539
Query: 352 LI-IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
I+A++ P RS +I + G +++ + + M GC + Y +
Sbjct: 540 FEEIKARRFVPDA----RSYSI-LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
+CK + +A QL+ ++ + G + V Y ++I+ A+ LF + + RI
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
Y +++ G + R + L+E+++ + + WNS++ A KA + +A
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG-LTPNLYTWNSLLDALVKAEEINEALV 713
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ M L+ PN TY LING ++ + W E++++
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 155/409 (37%), Gaps = 57/409 (13%)
Query: 208 ALDENLDFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
ALD+ L M P++ C + GC + + V++ M RP S++ L
Sbjct: 116 ALDQILGEMSVAGFGPSVNTCIEMVLGCVKA-NKLREGYDVVQMMRKFKFRPAFSAYTTL 174
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
++ + ++ L M E G+ + +++LI G+ K G ++SA +
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLL------DE 228
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
M+ S + L N+ I++ FG +G
Sbjct: 229 MKSSSLDADIV---------------LYNVCIDS---------------FG------KVG 252
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
D A E+ A G Y + CK +R EA ++ + + Y+
Sbjct: 253 KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYN 312
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
+I ++ F A+SL R +Y I+T L + + + +E+ +D
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD 372
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+ T +N +I C+AG+L+ A M PN +T +++ +++
Sbjct: 373 AAPNLST--YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 563 VLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
M+ E+ K+ T + I F +L+D L K G D +V EK
Sbjct: 431 ACAMFEEMDYKVCTPDE--ITF-CSLID----GLGKVGRVDDAYKVYEK 472
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 94/466 (20%), Positives = 170/466 (36%), Gaps = 49/466 (10%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
D A++ S+ LFP+ N ++ L Q F + Y + P + F +
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV-CTPDEITFCS 452
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNS-NFVAFLKVF-- 201
+ LG + + A ++++ L CR NS + + +K F
Sbjct: 453 LIDGLGKVGRVDDA------------------YKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 202 ----EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNES 257
E+ +I D P++ N ++ C + + E + P+
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMD-CMFKAGEPEKGRAMFEEIKARRFVPDAR 553
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
S+ L + G + EL M E G Y+ +I G+ K G + A + +
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL--- 610
Query: 318 LGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ--KLEPSGIVVDRSV-GF 372
M+ F TY V+ G + + L EA+ ++E + ++ + GF
Sbjct: 611 ---EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
G +G D+A+ IL+E+ G + L + L A K EA +
Sbjct: 668 G------KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL 721
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
+ Y LI + F AF +++M++ + SY T+++GL +
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA----KRTLRR 534
A D + V + +N++I R DA + T RR
Sbjct: 782 GALFDRFKANGGVP-DSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
>gi|357119238|ref|XP_003561352.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Brachypodium distachyon]
Length = 732
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 153/373 (41%), Gaps = 44/373 (11%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P ++ACN L G V DA K+ + MS GVRP +F + G+ E+I
Sbjct: 231 VQPQVHACNRVL-GALAAAGHVEDALKLFDEMSEGGVRPMPVTFAIIVRALGHAGMTERI 289
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+E+ M + + Y++L+ ++ G++E R + +G +E + Y
Sbjct: 290 LEMIGRMRDEVCRPDVFVYTALVKTMMRRGHIEGCIR-VWEEMGTDGVEPDAMA---YAT 345
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+V G G V+ A L E +K G++VDR+V ++ V G +L EM
Sbjct: 346 MVGGLCNAGMVEQAAKLFEEMRK---KGLLVDRTVFASLVDGYVADGRVGDGCRVLKEMV 402
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEA-------------------TQLVMDISSSGLQL 436
G LG Y + C R +A +QL++ + G +
Sbjct: 403 DAGYRADLGTYNTLIGGLCGIGREDKAYKMFQIILQEELVPSSETVSQLLVCYADKGEMI 462
Query: 437 DV-GNYDALIEASITSQDF---------------QSAFSLFRDMREARIYDLKGSYLTIM 480
+ G D L+E + + D+ A +F MR+ Y + +Y I+
Sbjct: 463 KIFGLVDKLVELRLPATDYLVDFLKLFACKDGRELKAVEVFDTMRQRGYYSVS-TYNIII 521
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
L++ + +E+ + ++ ++ +I F + G +E+A M+ ++
Sbjct: 522 ENLLKIKERKKALLLFEEMQGSDDCKPESCTYSHMIPCFVEEGNIEEACSCYNSMMKAEW 581
Query: 541 EPNDQTYLSLING 553
P+ Y SL+ G
Sbjct: 582 IPSISAYCSLVKG 594
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 118/289 (40%), Gaps = 23/289 (7%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T +TL+G + A+ + + + + E LV K F V
Sbjct: 409 DLGTYNTLIGGLCGIGREDKAYKMFQIILQEELVPSSETVSQLLVCYADKGEMIKIFGLV 468
Query: 201 --FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
E A D +DF+K ++AC E L++V +V +TM G +
Sbjct: 469 DKLVELRLPATDYLVDFLK--LFACKDGRE-----LKAV----EVFDTMRQRGYYSVSTY 517
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ L +K ++ ++ E + + YS +I +V+ GN+E A C
Sbjct: 518 NIIIENLLKIKERKKALLLFEEMQGSDDCKPESCTYSHMIPCFVEEGNIEEA------CS 571
Query: 319 GGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
+M ++++ S YC +VKG + G + +L+ + +G ++ I+
Sbjct: 572 CYNSMMKAEWIPSISAYCSLVKGLCKIGEINAAVSLVTDCLGNVENG-PMEFKYTLTILE 630
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
AC + +K ++DEM G SV ++ + +CK + EA ++
Sbjct: 631 ACRSKS-PEKVMKVVDEMIELGYSVEEIIFCAIIYGFCKYATSTEARKV 678
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 156/397 (39%), Gaps = 49/397 (12%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+PNE + L +GL +K E+ M G + Y+++I+ Y + G ++
Sbjct: 131 KPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHAS-- 188
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNG-NVKGLANLIIEAQKLEPSGIVVDRSVG 371
L L G E+ S TY V+ + G + +GL L E + GI D
Sbjct: 189 --LELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAE---MRHEGIQPDVITY 243
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
++ AC + GL D+A + MN G + Y ++ + K +R + ++L+ ++
Sbjct: 244 NTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMEC 303
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA-------------RIYDLKGSYLT 478
G D+ +Y+ L+EA + A +FR M+ A +Y G Y
Sbjct: 304 GGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDD 363
Query: 479 IMTGLME----NHRPEL-----------MAAFLDEVVE------DPRVEVKTHDWNSIIH 517
+ +E N P+ + EVV + VE + +I
Sbjct: 364 VRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIF 423
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTD 577
A K G EDAK+ L M P+ + Y +I + A Y L+M++ T
Sbjct: 424 ACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFN-------TM 476
Query: 578 GQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+ G ++ ++A +GG + ++ + E
Sbjct: 477 NEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNE 513
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 163/413 (39%), Gaps = 87/413 (21%)
Query: 189 RKNSNFVAFLKVFEECCRIALD-ENL---------DFMKPNIYACNAALEGCCY-GLQSV 237
R + + + + V C R LD E L + ++P++ N L C + GL
Sbjct: 199 RVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGD- 257
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+AE V TM+ G+ P+ +++ +L + EK+ EL M G + Y+ L
Sbjct: 258 -EAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVL 316
Query: 298 ISGYVKLGNLE-----------------SASRTILLCLGGGN--------------MEQS 326
+ Y +LG+++ +A+ ++LL L G + + +
Sbjct: 317 LEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNT 376
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
D TY +++ F + G K + L + + +EP+ + G+I AC GL
Sbjct: 377 DPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYE-----GLIFACGKGGLY 431
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
+ A IL MN G Y ++A+ + EA + ++ G V Y++L
Sbjct: 432 EDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSL 491
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I A ++ A ++ M E +GL +
Sbjct: 492 IHAFARGGLYKEAEAILSRMNE--------------SGLKRD------------------ 519
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
H +N +I AF + G+ E+A ++ M EPN+ T ++++ Y +A
Sbjct: 520 ----VHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSA 568
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 15/315 (4%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
+++ AEK+ + M GV+P+ +F + + L K VE M EFG V Y
Sbjct: 190 RNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTY 249
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLII 354
S++I Y + GN++ A L E+ T+ +++ + +GN G N+
Sbjct: 250 SAMIDAYGRAGNVDMA----LKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYE 305
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
E + L G+ + + ++ A +A +I EM G G Y L+AY
Sbjct: 306 EMKAL---GVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYG 362
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR--IYD- 471
+ +A + ++ GL+L V Y+ L+ + A ++F DM+ + + D
Sbjct: 363 RARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDS 422
Query: 472 -LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
S +TI + + E M + E +P + V T S+I + KA R ++ R
Sbjct: 423 WTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLT----SLIQCYGKANRTDEVVR 478
Query: 531 TLRRMIFLQFEPNDQ 545
T R++ L P+D+
Sbjct: 479 TFDRLLELDITPDDR 493
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 128/339 (37%), Gaps = 31/339 (9%)
Query: 294 YSSLISGYVKLGNLESASRTI---LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
Y+SL+ L + E+ + L CLG +EQ +V + N LA
Sbjct: 110 YASLVKIAESLDSCEATEEDVSQVLRCLGDKILEQDAV-------IVLNNMTNPETALLA 162
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
++L+PS V+ +V + C NL D+A + DEM G + +
Sbjct: 163 FGFFR-KRLKPSREVILYNVTLKVFRKCRNL---DRAEKLFDEMLERGVKPDNITFSTII 218
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA--R 468
+A + + G D Y A+I+A + + A L+ R R
Sbjct: 219 SCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWR 278
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLE 526
I + S L + G+ N L+ E + VK + +N+++ A +A R
Sbjct: 279 IDPVTFSTLIRIYGMSGN-----FDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPW 333
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEH 586
AK + M +P+ TY +L+ Y A L+++ E+K +KG++
Sbjct: 334 QAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMK-------EKGLELSV 386
Query: 587 NLVDAFLYALVKGGFFDAVMQVVEKSQEM-KVFVDKWKY 624
L + L G+ + + E + D W +
Sbjct: 387 VLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTF 425
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 168/433 (38%), Gaps = 103/433 (23%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN++ NA ++G C + V A +++ M GV P+ ++ L + G E
Sbjct: 332 EPNVWTYNAMVQGFC-NVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS------------------RTIL--L 316
L LM G ++ Y+ LI K G ++ A T++ L
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Query: 317 CLGGG---------NMEQSDFSKETYCEVVKGFLQN-----GNVKGLANLIIEAQK-LEP 361
C GG M + + +TY F++N G+ +GL+ + QK ++P
Sbjct: 451 CKGGKFDVACTFLEKMVSAGCAPDTY--TYSPFIENLCKTKGSREGLSFIDEMLQKDVKP 508
Query: 362 SG----IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
S IV+DR + N GL+ + I +M + GCS + Y +++AYC E
Sbjct: 509 STVNYTIVIDR------LFKERNYGLATR---IWGQMVSLGCSPDVVTYTTSVRAYCNEG 559
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEA--SITSQD---------------------- 453
R EA +VM++ G+ +D Y+ LI+ SI D
Sbjct: 560 RLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFF 619
Query: 454 ---------------------------FQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
F LF M++ + +YL I+ G E
Sbjct: 620 ILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEE 679
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
R + + + + + ED + + + S+++ FCK DA L MI F PN +
Sbjct: 680 RRLDEVTSLVSHMKED-DLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLIS 738
Query: 547 YLSLINGYVTAEQ 559
Y L++G+ Q
Sbjct: 739 YQYLLSGFTAEGQ 751
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 143/336 (42%), Gaps = 25/336 (7%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN 283
NA + C + A++ + M G RP+ +F L Y + +L M
Sbjct: 133 NALIRALCRR-ADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMP 191
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQ- 342
GFS V Y++LI G+ + G ++ A +EQ D T+ +VKG
Sbjct: 192 LRGFSQDAVSYAALIEGFCETGRVDEALELF------RELEQPDMY--THAALVKGLCDA 243
Query: 343 NGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG---C 399
+GL L QK++ G ++ +++A +L+EM G C
Sbjct: 244 RRGEEGLYML----QKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPC 299
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
+V V AYC+E R + A ++ + G + +V Y+A+++ A +
Sbjct: 300 AVTCTAVV---NAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMA 356
Query: 460 LFRDMREARIYDLKGSYLTIMTG-LMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIH 517
L MRE + +Y ++ G ++ H + +AF L ++E + + +N +I
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGH---IESAFRLLRLMEGNGLAADQYTYNVLID 413
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A CK G++++A + + PN T+ ++ING
Sbjct: 414 ALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 152/385 (39%), Gaps = 56/385 (14%)
Query: 193 NFVAFLKVFEECCRIALDENLDFMK----PNIYACNAALEGCCYGLQSVSDAEKVIETMS 248
++ A ++ F E R+ DE L+ + P++Y A ++G C + + +++ M
Sbjct: 201 SYAALIEGFCETGRV--DEALELFRELEQPDMYTHAALVKGLCDARRG-EEGLYMLQKMK 257
Query: 249 VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLG 305
LG RP ++ L L+ ++K E E ++NE G V +++++ Y + G
Sbjct: 258 ELGWRPATRAYAALVDLWCR---EQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREG 314
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV 365
+ A R ++ + + TY +V+GF
Sbjct: 315 RMSGAVRV----FESMKLKGCEPNVWTYNAMVQGF------------------------- 345
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
N+G KA ++LD+M CG + Y ++ C + A +L
Sbjct: 346 -------------CNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRL 392
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ + +GL D Y+ LI+A + A SLF + I ++ T++ GL +
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+ ++ FL+++V T+ ++ I CK + + M+ +P+
Sbjct: 453 GGKFDVACTFLEKMVS-AGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTV 511
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEI 570
Y +I+ Y +W ++
Sbjct: 512 NYTIVIDRLFKERNYGLATRIWGQM 536
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 135/332 (40%), Gaps = 13/332 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P C A + C +S A +V E+M + G PN ++ + + G K +
Sbjct: 298 PCAVTCTAVVNAYCRE-GRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMA 356
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M E G +V Y+ LI G G++ESA R LL L GN +D + TY ++
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFR--LLRLMEGNGLAAD--QYTYNVLI 412
Query: 338 KGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ G V +L +E + + P+ + + +I+ G D A + L++M
Sbjct: 413 DALCKTGKVDEACSLFDGLEYRGIRPNSVTFNT-----VINGLCKGGKFDVACTFLEKMV 467
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ GC+ Y P ++ CK + E + ++ ++ NY +I+ +++
Sbjct: 468 SAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYG 527
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A ++ M +Y T + R + E+ + + V +N++
Sbjct: 528 LATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKG-GIIVDAMAYNTL 586
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
I G+ + A L+ M + PN T+
Sbjct: 587 IDGHTSIGKTDHAVTILKHMTGVASMPNHFTF 618
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 81/187 (43%), Gaps = 5/187 (2%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D A + D+M G S Y ++ +C+ R EA +L ++ Q D+ + AL
Sbjct: 181 DVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAAL 236
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
++ ++ + + + M+E +Y ++ + E L+E+ ++
Sbjct: 237 VKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGL 296
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
V ++++A+C+ GR+ A R M EPN TY +++ G+ + + +
Sbjct: 297 VPCAV-TCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAM 355
Query: 565 MMWHEIK 571
+ +++
Sbjct: 356 ALLDQMR 362
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 70/162 (43%), Gaps = 5/162 (3%)
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
YC+ + A L + G D +Y ALIE + A LFR++ + +Y
Sbjct: 173 GYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMY- 231
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
++ ++ GL + R E ++ + +++ T + +++ +C+ + E+A++
Sbjct: 232 ---THAALVKGLCDARRGE-EGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKM 287
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
L M P T +++N Y + + ++ +K K
Sbjct: 288 LNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLK 329
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 157/355 (44%), Gaps = 12/355 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N+ + C +++ AE V+ M ++P+E ++ + + Y+ G ++ +
Sbjct: 305 PNVVTYNSIVHALCKA-RAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAK 363
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M G +V ++SL+ K + A+ G+ + D +Y ++
Sbjct: 364 MFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGH--KPDII--SYSILL 419
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G+ G + NL + +GIV D +I+A G+ D+A I EM
Sbjct: 420 HGYATEGRFVDMNNLF---HSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQ 476
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G S + Y + A C+ R A+A + + + S GL+ + Y +LI+ T D A
Sbjct: 477 GVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKA 536
Query: 458 FSLFRDMREARIYDLKGSYL-TIMTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDWNSI 515
L +M + I ++ +I+ L R + V+ R ++ T +NS+
Sbjct: 537 KELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFT--FNSL 594
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
I +C G+++ A L M+ EP+ TY +LINGY + + L+++ E+
Sbjct: 595 IDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREM 649
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 38/192 (19%)
Query: 384 SDKAHS-ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS-SSGLQLDVGNY 441
+D+A S +L M+ GC Y +K+ C R+ EA +++ ++ G DV +Y
Sbjct: 216 TDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSY 275
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+I + A +LF +M + KG ++T
Sbjct: 276 TMVIHGLFMEGEISKACNLFNEMVQ------KGVVPNVVT-------------------- 309
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
+NSI+HA CKA ++ A+ LR+M +P++ TY ++I+GY ++
Sbjct: 310 ----------YNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWK 359
Query: 562 SVLMMWHEIKRK 573
M+ E+ R+
Sbjct: 360 EAAKMFKEMTRE 371
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 168/404 (41%), Gaps = 30/404 (7%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
K+F+E R L P+I N+ ++ C +S +A ++ +++ G +P+ S
Sbjct: 363 KMFKEMTREGL-------IPDIVTFNSLMDSLCKHKRS-KEAAEIFHSIATKGHKPDIIS 414
Query: 259 FGFLAYLYALKGLQEKIVELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
+ L + YA +G + V++ +L M + G + ++ LI+ + K G ++ A L
Sbjct: 415 YSILLHGYATEG---RFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEA----L 467
Query: 316 LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII 375
L + + TY V+ + G LA+ + + ++ G+ + V +I
Sbjct: 468 LIFTEMRGQGVSPNVVTYATVIAALCRMGR---LADAMEKLSQMISIGLKPNTVVYHSLI 524
Query: 376 SACVNLGLSDKAHSILDEMNACGCS-VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
G KA ++ EM G + + + + C E R A + + G
Sbjct: 525 QGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGD 584
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+ D+ +++LI+ AF + M A +Y T++ G ++ R +
Sbjct: 585 RPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLI 644
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
E++ RV+ T ++ ++ +AGR AK+ MI + TY ++ G
Sbjct: 645 LFREMLCK-RVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGL 703
Query: 555 VTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVK 598
+ ++H++ G +KFE +++ ++AL K
Sbjct: 704 CRNNCTDEAITLFHKL-------GAMNLKFEIAILNTMIHALYK 740
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/432 (18%), Positives = 164/432 (37%), Gaps = 48/432 (11%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLD---- 141
EA K FK +T L P NSL+ L + + F S+ K P ++
Sbjct: 360 EAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHK-PDIISYSIL 418
Query: 142 ---------FQTVHTLLGSMRNANTAAPAFAL--------VKCMFKNRYFMPFELWGGFL 184
F ++ L SM + A + + M + E+ G +
Sbjct: 419 LHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGV 478
Query: 185 VDICRKNSNFVAFLKVFEECCRIA--------LDENLDF-MKPNIYACNAALEGCCYGLQ 235
+ N V + V CR+ L + + +KPN ++ ++G C
Sbjct: 479 ------SPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGD 532
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+ E V E M RPN + F + + +G ++ +L+ G + ++
Sbjct: 533 LIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFN 592
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
SLI GY +G ++ A + + G + D TY ++ G+ ++G + L E
Sbjct: 593 SLIDGYCLVGKMDKAFGVLDAMVSAGT--EPDVV--TYSTLINGYFKSGRIDDGLILFRE 648
Query: 356 --AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
++++P+ + ++ G + A + EM G ++ + Y L+
Sbjct: 649 MLCKRVKPTTVTYSL-----VLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGL 703
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C+ + T EA L + + L+ ++ + +I A + + A LF + + +
Sbjct: 704 CRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNA 763
Query: 474 GSYLTIMTGLME 485
+Y ++ L++
Sbjct: 764 STYGVMIINLLK 775
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 148/352 (42%), Gaps = 20/352 (5%)
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
++ + E + G S+ +V Y+++++GY + G +E A R I G F T+
Sbjct: 202 RVSDAERVFAALGPSATVVTYNTMVNGYCRAGRIEDARRLI----NGMPFPPDTF---TF 254
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+++ G + + + S VV S+ + C G +A ++LDE
Sbjct: 255 NPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLD--ATCKESGYR-QAMALLDE 311
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M A GC + Y + A C E EA ++ ++ S G + D Y ++++ S+
Sbjct: 312 MRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSER 371
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-EVKTHDW 512
++ L +M + ++ TI+T L + + +D + E V ++ T +
Sbjct: 372 WKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVT--Y 429
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+SI+ C GR++DA L R+ +P+ Y +++ G + EQ W +
Sbjct: 430 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQ-------WERAEE 482
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
++ + + + +L + G D ++VVE+ E D Y
Sbjct: 483 LMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTY 534
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 162/391 (41%), Gaps = 48/391 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP+ L+ C G + + E+++ M+ P+E +F + +GL ++ +
Sbjct: 353 KPDAVTYTPVLKSLC-GSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAI 411
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
E+ M+E G + +V YSS++ G +G ++ A + ++ +T Y
Sbjct: 412 EVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELL------SRLKSYGCKPDTIAYT 465
Query: 335 EVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
V+KG + L+ E P + + ++++ GL D+A +++
Sbjct: 466 TVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNT-----VVASLCQKGLVDRAIRVVE 520
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M+ GCS + Y + C E +A +L+ D+ S G + D+ ++ L++
Sbjct: 521 QMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVD 580
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN-------HRPELMAA----------- 494
++ A L +M + + ++ T++T L + ++MA
Sbjct: 581 RWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYS 640
Query: 495 -FLDEVVEDPRVEVK----------THD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
+D +++ + + T D +N++I KAG++E+A LR M+
Sbjct: 641 IVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGL 700
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
P+ TY SL G + + M ++
Sbjct: 701 CPDTTTYRSLAYGVCREDGTDRAVRMLRRVQ 731
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 18/235 (7%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP+I N L+G C G+ DAE+++ M P+E +F + KGL + +
Sbjct: 563 KPDIVTFNTLLKGLC-GVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
E +M E G YS ++ +K G ++A L L G D TY V
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAA----LELLSGMTNGTPDLI--TYNTV 675
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVD----RSVGFGIISACVNLGLSDKAHSILD 392
+ + G ++ +L+ + + +G+ D RS+ +G+ C G +D+A +L
Sbjct: 676 ISNLTKAGKMEEALDLL---RVMVSNGLCPDTTTYRSLAYGV---CREDG-TDRAVRMLR 728
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ G S Y L +C++ RT A + SSG D Y L+EA
Sbjct: 729 RVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEA 783
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/371 (18%), Positives = 144/371 (38%), Gaps = 24/371 (6%)
Query: 192 SNFVAFLKVFEECCRIA-LDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEK 242
++ V + + + C + +D+ ++ + KP+ A L+G C + AE+
Sbjct: 424 ADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLC-STEQWERAEE 482
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
++ M P+E +F + KGL ++ + + M+E G S +V Y+ +I G
Sbjct: 483 LMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLC 542
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
++ A + +++ + T+ ++KG + L+ +
Sbjct: 543 NESCIDDAMELL------SDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMR-- 594
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
S D +I++ GL +A L M GC Y + A K +
Sbjct: 595 -SNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQ 653
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
A +L+ +++ D+ Y+ +I + + A L R M + +Y ++
Sbjct: 654 AALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLA 711
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
G+ + L V +D + T +N ++ FC+ R + A M+
Sbjct: 712 YGVCREDGTDRAVRMLRRV-QDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGC 770
Query: 541 EPNDQTYLSLI 551
P++ TY+ L+
Sbjct: 771 MPDESTYVILL 781
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 154/361 (42%), Gaps = 48/361 (13%)
Query: 213 LDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL 271
+DF + PN++ NA ++ C G + +AE + + M +G+RPN+ ++ L ++ +G
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKG-RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
+ + M + G + Y+SLI+G+ K G++ +A
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA--------------------- 456
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+GF +A +I +KLEP+ +V S+ G S G +KA +
Sbjct: 457 ------EGF--------MAEMI--NKKLEPT-VVTYTSLMGGYCSK----GKINKALRLY 495
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
EM G + + + L + +A +L +++ ++ + Y+ +IE
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
D AF ++M E I SY ++ GL + F+D + E+
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG-LHKGNCELNEIC 614
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ---YFSVLMMWH 568
+ ++H FC+ G+LE+A + M+ + + Y LI+G + + +F +L H
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 569 E 569
+
Sbjct: 675 D 675
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 103/490 (21%), Positives = 191/490 (38%), Gaps = 89/490 (18%)
Query: 163 ALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFM------ 216
AL+ + K R F EL + I + ++ + + C R LD L F+
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431
Query: 217 --KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
K ++Y N+ + G C +S AE + M + P ++ L Y KG K
Sbjct: 432 GLKLSVYPYNSLINGHCK-FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKET 332
+ L M G + + +++L+SG + G + A + M + + ++ T
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF------NEMAEWNVKPNRVT 544
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y +++G+ + G++ + +++ GIV D +I G + +A +D
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFL---KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
++ C + Y L +C+E + EA + ++ G+ LD+ Y LI+ S+ +
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 453 DFQSAFSLFR-------------------------DMREA-RIYDL---------KGSYL 477
D + F L + D +EA I+DL + +Y
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721
Query: 478 TIMTGLMEN---HRPELMAA----------------FLD-----EVVEDPRVEV------ 507
++ GL + + E++ + FLD EV VE+
Sbjct: 722 AVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK 781
Query: 508 ----KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
T +N +I FC+ GR+E+A + RMI P+ TY ++IN
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 564 LMMWHEIKRK 573
+ +W+ + K
Sbjct: 842 IELWNSMTEK 851
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 1/190 (0%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
GI D + G+I + L +A ++ M A GC V + Y + CK+ + EA
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+ D++ L+ DV Y L+ Q+F+ + +M R + + +++ G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
L + + E + VV D V +N++I + CK + +A+ RM + P
Sbjct: 342 LRKRGKIEEALNLVKRVV-DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRP 400
Query: 543 NDQTYLSLIN 552
ND TY LI+
Sbjct: 401 NDVTYSILID 410
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
K + EA LV + G+ ++ Y+ALI++ + F A LF M + +
Sbjct: 344 KRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDV 403
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+Y ++ + + +FL E+V D +++ + +NS+I+ CK G + A+ +
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMV-DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE 462
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
MI + EP TY SL+ GY + + L ++HE+ K
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 148/369 (40%), Gaps = 22/369 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ + G C +Q ++++ M L P+E++ L +G E+
Sbjct: 293 LKPDVVTYCTLVYGLCK-VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEA 351
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L + +FG S + Y++LI K G + + +G + +D TY
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCK-GRKFHEAELLFDRMGKIGLRPNDV---TYSI 407
Query: 336 VVKGFLQNGNVKG----LANLIIEAQKLE--PSGIVVDRSVGFGIISACVNLGLSDKAHS 389
++ F + G + L ++ KL P +++ FG ISA A
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA---------AEG 458
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ EM + Y + YC + + +A +L +++ G+ + + L+
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
+ + A LF +M E + + +Y ++ G E FL E+ E V T
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP-DT 577
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+ + +IH C G+ +AK + + E N+ Y L++G+ + L + E
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 570 -IKRKISTD 577
++R + D
Sbjct: 638 MVQRGVDLD 646
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 171/437 (39%), Gaps = 56/437 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ N + G C V++A +I+ M G NE ++G + G +
Sbjct: 171 RPNVVTVNTLINGLCLK-GRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
+L M E + +V YS +I K GNL+ A ME + Y
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLF------NEMEMKGIKADVVAYS 283
Query: 335 EVVKGFLQNG-------------------NVKGLANLI---------IEAQKL----EPS 362
++ G +G NV + LI +EA++L
Sbjct: 284 SIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVAR 343
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
GI D +I +A+ +LD M + GC + Y + +YCK R
Sbjct: 344 GIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNG 403
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+L +ISS GL D Y+ L++ S A LF++M + +Y ++ G
Sbjct: 404 MRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDG 463
Query: 483 LMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
L +N EL A + E ++ R+ + +N IIH C A +++DA + +
Sbjct: 464 LCDNG--ELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVK 521
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN-LVDAFLYALVKGG 600
P+ TY +I G M++ RK+ DG +N L+ A L GG
Sbjct: 522 PDVLTYNVMIGGLCKKGSLSEADMLF----RKMKEDGCAPSDCTYNILIRAHL-----GG 572
Query: 601 FFDAVMQVVEKSQEMKV 617
V+ VE +EMK+
Sbjct: 573 --SGVISSVELIEEMKM 587
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 112/279 (40%), Gaps = 43/279 (15%)
Query: 332 TYCEVVKGFLQNGNVK---GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
T+ ++ GF G V L + ++E K P+ + V+ +I+ G +A
Sbjct: 141 TFSTLINGFCLEGRVSEAVALVDRMVE-MKYRPNVVTVNT-----LINGLCLKGRVTEAL 194
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
++D M GC Y P L CK TA A L + ++ V Y +I++
Sbjct: 195 VLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSL 254
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV-------- 500
+ A SLF +M I +Y +I+ GL + R + A L E++
Sbjct: 255 CKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNV 314
Query: 501 ------------EDPRVEVK--------------THDWNSIIHAFCKAGRLEDAKRTLRR 534
E +E K T ++S+I FCK RL +A + L
Sbjct: 315 VTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDL 374
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
M+ EPN TY LIN Y A++ + + ++ EI K
Sbjct: 375 MVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSK 413
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 162/392 (41%), Gaps = 64/392 (16%)
Query: 227 LEGCCYG------LQSVSDAE--KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
L CCY + +DA +V++ M GV P ++ L + G I ++
Sbjct: 166 LNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAG---DISKV 222
Query: 279 ESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
ES+ +E + + FYS++I+ Y + GN+ AS C+G G + ++ TY
Sbjct: 223 ESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNG----IEPNERTYGA 278
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ GF + G ++ L+ + Q G+ ++ + +I G+ DKA I M
Sbjct: 279 LINGFCKIGQIEAAEMLLTDMQL---RGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVME 335
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + + Y C+ +R +A +L+ ++ +G++ + +Y LI D
Sbjct: 336 RMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMV 395
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A LFRDM + KGS +++T +N +
Sbjct: 396 EARRLFRDM------EGKGSRPSVVT------------------------------YNVM 419
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I + K+G + +A+R + M P+ TY +L++G+ + L ++ E+K
Sbjct: 420 IDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMK---- 475
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQ 607
Q+G K A + L K G + Q
Sbjct: 476 ---QRGAKPNVVAYTALISGLAKEGRSEEAFQ 504
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 106/271 (39%), Gaps = 53/271 (19%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++ G D A +LDEM G + Y P L Y ++ A +++ ++ S G
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG 198
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ VG Y L++ T+ D S+F +++
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKN------------------------- 233
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
V + ++++I+A+C+AG + A + EPN++TY +LING
Sbjct: 234 -----------VAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALING 282
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQ-KGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
+ Q + M+ TD Q +G+ + + + + G D +++
Sbjct: 283 FCKIGQIEAAEMLL--------TDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVM 334
Query: 613 QEMKVFVDKWKY--------KQAFMENHKKL 635
+ M + +D + Y + ME+ KKL
Sbjct: 335 ERMGIQLDVYTYNTLACGLCRVNRMEDAKKL 365
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 122/313 (38%), Gaps = 51/313 (16%)
Query: 188 CRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETM 247
CR N +VF+EC + ++PN A + G C + + AE ++ M
Sbjct: 249 CRAG-NVRRASEVFDECVG-------NGIEPNERTYGALINGFCK-IGQIEAAEMLLTDM 299
Query: 248 SVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL 307
+ GV N+ F + Y G+ +K +E++++M G + Y++L G ++ +
Sbjct: 300 QLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRM 359
Query: 308 ESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
E A + LL + N +S++ +Y ++ + G+ ++EA++L
Sbjct: 360 EDAKK--LLHIMTENGVESNYV--SYTTLISIHSKEGD-------MVEARRL-------- 400
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+M G + Y + Y K EA +
Sbjct: 401 -----------------------FRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKK 437
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
++ GL DV Y AL+ + A LF +M++ +Y +++GL +
Sbjct: 438 EMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEG 497
Query: 488 RPELMAAFLDEVV 500
R E F D ++
Sbjct: 498 RSEEAFQFYDNML 510
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/487 (21%), Positives = 192/487 (39%), Gaps = 33/487 (6%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
++ S T ++ + D+A+ ++ + + P+ NS+IA L Q
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVL 257
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
S+V KN + + +T ++++ ++ A +K M + P + L+D
Sbjct: 258 TSMV----KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMD 312
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDAEKVIE 245
KN K+F+ + L KP I L+G Y + ++ + +++
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGL-------KPEITTYGTLLQG--YATKGALVEMHGLLD 363
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M G+ PN F L YA +G ++ + + S M + G + V Y ++I K G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423
Query: 306 NLESASR----TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
+E A R I L GN+ Y ++ LI+E +
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNI--------VYNSLIHSLCIFDKWDKAKELILE---MLD 472
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
GI +D II + G ++ + D M G + Y + YC + E
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDE 532
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
AT+L+ + S G++ D Y+ LI + A LFR+M + + +Y I+
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592
Query: 482 GLMENHRPELMAAFLDEVVED-PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL + R + E ++E+ T +N I+H CK ++A R + +
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELST--YNIILHGLCKNNLTDEALRMFQNLCLTDL 650
Query: 541 EPNDQTY 547
+ +T+
Sbjct: 651 QLETRTF 657
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 157/363 (43%), Gaps = 27/363 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N+ + C Q++ A +V+ +M GV PN ++ + + Y G ++ +
Sbjct: 232 PNVVTYNSIIAALCKA-QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIG 290
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
M+ G +V Y+SL+ K G A + +M + E TY
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF------DSMTKRGLKPEITTYGT 344
Query: 336 VVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+++G+ G + GL +L++ +GI + V +I A G D+A +
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVR------NGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN--YDALIEASIT 450
+M G + Y + CK R +A + + +L GN Y++LI +
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE--RLSPGNIVYNSLIHSLCI 456
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ A L +M + I + +I+ + R D +V R+ VK +
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV---RIGVKPN 513
Query: 511 --DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
++++I +C AG++++A + L M+ + +P+ TY +LINGY + L+++
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573
Query: 569 EIK 571
E++
Sbjct: 574 EME 576
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 95/496 (19%), Positives = 192/496 (38%), Gaps = 72/496 (14%)
Query: 121 NLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELW 180
+L +A+ + ++++ L + T ++++ ++ A A ++ M KN +
Sbjct: 214 DLDKAYGTYHEMLDRGI-LPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 181 GGFLVDICRKNS--NFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVS 238
+ C + FLK D ++P++ N+ ++ C +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHS----------DGVEPDVVTYNSLMDYLCKN-GRCT 321
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+A K+ ++M+ G++P +++G L YA KG ++ L LM G +S LI
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEA 356
Y K G ++ A M Q + +T Y V+ ++G V+ +
Sbjct: 382 CAYAKQGKVDQAMLVF------SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 357 --QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
++L P IV + I S C+ DKA ++ EM G + + + ++C
Sbjct: 436 IDERLSPGNIVYNSL----IHSLCI-FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
KE R E+ +L + G++ ++ Y LI+ + A L M
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASM---------- 540
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+ G+ +P+ + +N++I+ +CK R+EDA R
Sbjct: 541 ----VSVGM----KPDCVT------------------YNTLINGYCKISRMEDALVLFRE 574
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY 594
M P+ TY ++ G + + ++ I + G + E + + L+
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT-------ESGTQLELSTYNIILH 627
Query: 595 ALVKGGFFDAVMQVVE 610
L K D +++ +
Sbjct: 628 GLCKNNLTDEALRMFQ 643
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 109/277 (39%), Gaps = 31/277 (11%)
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL- 436
C + SD +L M GC + Y LK C E+R+ EA +L+ + G
Sbjct: 137 CADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP 196
Query: 437 -DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
DV +Y +I D A+ + +M + I +Y +I+ L + +
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEV 256
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI---- 551
L +V++ V +NSI+H +C +G+ ++A L++M EP+ TY SL+
Sbjct: 257 LTSMVKNG-VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315
Query: 552 -NGYVTAEQYFSVLMMWHEIKRKISTDG-----------------------QKGIKFEHN 587
NG T + M +K +I+T G + GI H
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 588 LVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ + A K G D M V K ++ + D Y
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 143/345 (41%), Gaps = 44/345 (12%)
Query: 227 LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-----QEKIVELESL 281
L+G C ++ + V+ M+ LG PN S+ L LKGL ++ +EL +
Sbjct: 133 LKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL-----LKGLCDENRSQEALELLQM 187
Query: 282 MNEFG--FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV-K 338
M + G +V Y+++I+G+ K G+L+ A TY E++ +
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKA-------------------YGTYHEMLDR 228
Query: 339 GFLQN-GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC----------VNLGLSDKA 387
G L N + + +AQ ++ + V+ V G++ C + G +A
Sbjct: 229 GILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
L +M++ G + Y + CK R EA ++ ++ GL+ ++ Y L++
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
T L M I+ + ++ + + + A + + +
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD-QAMLVFSKMRQQGLNP 407
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
T + ++I CK+GR+EDA R +MI + P + Y SLI+
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 146/382 (38%), Gaps = 56/382 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF---GFLAYLYALKGL--- 271
PN+++ N L+G C D + E + +L + P++ ++Y + G
Sbjct: 160 PNVFSYNILLKGLC-------DENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 272 --QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
+K M + G +V Y+S+I+ K ++ A + + G M
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC--- 269
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
TY +V G+ +G K + +K+ G+ D ++ G +A
Sbjct: 270 -RTYNSIVHGYCSSGQPKEAIGFL---KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ D M G + Y L+ Y + E L+ + +G+ + + LI A
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-------- 501
A +F MR+ + +Y T++ L ++ R E + +++++
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445
Query: 502 --------------------------DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
D + + T +NSII + CK GR+ ++++ M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505
Query: 536 IFLQFEPNDQTYLSLINGYVTA 557
+ + +PN TY +LI+GY A
Sbjct: 506 VRIGVKPNIITYSTLIDGYCLA 527
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V ++EK+ + M +GV+PN ++ L Y L G ++ +L + M G V Y++
Sbjct: 495 VIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
LI+GY K+ +E A +L ME S S + TY +++G Q L +
Sbjct: 555 LINGYCKISRMEDA--LVLF----REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
+ SG ++ S I+ L+D+A + + + + + A
Sbjct: 609 ---GITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
K R EA L +S++GL DV Y + E
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 697
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 171/437 (39%), Gaps = 50/437 (11%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA-LKGLQ 272
D + P++ + ++G C + A +++ M + GV P++ +F L + + +
Sbjct: 107 DGIAPDVVTYTSVVDGLCRD-GKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVD 165
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
E + + ++ + +V Y++LI G+ K GNLE A + + G ME
Sbjct: 166 EALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKML------GVMEGRKCVPNV 219
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY ++ G + G++ +L +++ G V + +I D A +
Sbjct: 220 VTYSSLLHGLCKAGDLDQALDLF---RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL 276
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS------------------- 431
+DEM A C Y L YC+ R EA QL ++++
Sbjct: 277 MDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCN 336
Query: 432 -----------------SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+G+ DV Y ++ ++ F A ++M +
Sbjct: 337 ASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAV 396
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+Y +++ GL + R + L +V + RVE +NS+I A C+ G +++A + L
Sbjct: 397 TYSSLIDGLCKAGRVDHAMEVLKNMV-NKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVA 455
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY 594
M EP TY +L+ G+ + ++ +++K A +
Sbjct: 456 MAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIR 515
Query: 595 ALVKGGFFDAVMQVVEK 611
L K D M VVE+
Sbjct: 516 GLCKAREIDKAMAVVEE 532
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 149/368 (40%), Gaps = 22/368 (5%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVE-LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
V PNE ++ + L K E L+ + + + +V YS++I+G+ K G ++ A
Sbjct: 37 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 96
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
+ + + TY VV G ++G + ++ ++++ G+ D+
Sbjct: 97 CEILREMVTRDGIAPDVV---TYTSVVDGLCRDGKMDRACEMV---REMKLKGVEPDKFT 150
Query: 371 GFGIISACVNLGLSDKAHSILDE-MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
+I+ N D+A + E + + + Y + +CK +A +++ +
Sbjct: 151 FSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVM 210
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+V Y +L+ + D A LFR M +Y T++ GL H+
Sbjct: 211 EGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKV 270
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+ +DE+ T +N+++ +C+ GR+E+AK+ + M P+ TY
Sbjct: 271 DAARLLMDEMTATC-CPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTC 329
Query: 550 LINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDA--VMQ 607
L+ G+ A + + +K D D Y++V G+ A ++
Sbjct: 330 LVRGFCNASRLEEARFLLENMKTAAGIDP-----------DVVTYSIVVAGYSRAKRFVE 378
Query: 608 VVEKSQEM 615
E QEM
Sbjct: 379 AAEFIQEM 386
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 153/379 (40%), Gaps = 40/379 (10%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
+F+ PN N + G C + E + E V P+ ++ + + +G +
Sbjct: 35 EFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD 94
Query: 274 KIVE-LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI----------------LL 316
+ E L ++ G + +V Y+S++ G + G ++ A + L
Sbjct: 95 RACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 154
Query: 317 CLGGGNMEQSD----FSKE------------TYCEVVKGFLQNGNVKGLANL--IIEAQK 358
G N + D KE TY ++ GF ++GN++ + ++E +K
Sbjct: 155 ITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRK 214
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
P+ +V S+ G+ A G D+A + M + GC + Y + C H+
Sbjct: 215 CVPN-VVTYSSLLHGLCKA----GDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHK 269
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
A L+ +++++ D +Y+AL++ + A LF++M + +Y
Sbjct: 270 VDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTC 329
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ G R E L+ + ++ ++ ++ + +A R +A ++ MI
Sbjct: 330 LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 389
Query: 539 QFEPNDQTYLSLINGYVTA 557
PN TY SLI+G A
Sbjct: 390 NVAPNAVTYSSLIDGLCKA 408
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 171/432 (39%), Gaps = 45/432 (10%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
DEA K +K + +S + KP + A + + NL++A ++ V+E + + T
Sbjct: 165 DEALKLYKEILTSSSW--KPDVVTYTALIDGFCKSGNLEKAM-KMLGVMEGRKCVPNVVT 221
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
+LL + A A L + M + + +C + A
Sbjct: 222 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAA-------- 273
Query: 205 CRIALDE-NLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
R+ +DE P+ + NA L+G C L + +A+++ + M+ P+ ++ L
Sbjct: 274 -RLLMDEMTATCCPPDTVSYNALLDGYCR-LGRIEEAKQLFKEMATKSCLPDRITYTCLV 331
Query: 264 YLYA-LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ L+E LE++ G +V YS +++GY + A+ I
Sbjct: 332 RGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFI------QE 385
Query: 323 MEQSDFSKE--TYCEVVKGFLQNGNV----KGLANLIIEAQKLEPSGIVVDRSVGF--GI 374
M + + TY ++ G + G V + L N++ +++EPS VG +
Sbjct: 386 MIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMV--NKRVEPS-------VGTFNSV 436
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL--VMDISSS 432
I A LG D+A +L M A G G+ Y L+ + + R A +L VM +
Sbjct: 437 IGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAK 496
Query: 433 GLQLDVG-----NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ ALI +++ A ++ ++R + L I+ GL+
Sbjct: 497 KSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAG 556
Query: 488 RPELMAAFLDEV 499
R E ++ +
Sbjct: 557 RTEEAGKLINSI 568
>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 152/354 (42%), Gaps = 20/354 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQEK 274
+KP+ + G C + + +A KV + M PN + L Y KG ++
Sbjct: 196 VKPDASTYTTMIRGFC-KVGMIDNARKVFDEMIC---EPNLITCNTLINGYCKKGDMENA 251
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+ L +M V YS+LI GY K G L A + + G + + + TY
Sbjct: 252 RIFLCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARKW----MDGMLIRGCNPNLWTYN 307
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G GNV L+ K+ +G+ + + I+ G S++A EM
Sbjct: 308 AIIYGLCLRGNVDEARRLL---TKMRLNGVKENVATHLSILKGLSVAGKSEEAIGYFSEM 364
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + + + AYCK + EA L+ ++ + G+ VG+++A++ + +
Sbjct: 365 IRKGMKLDAKEHEVVITAYCKMRKPDEAISLLKEMQAKGISRSVGSFNAVLRILVEIGEL 424
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENH-RPELMAAFLDEVVEDPRVEVKTHDWN 513
A L + ++ SY T++ GL +H R + +A +D++++D E+ ++
Sbjct: 425 DKAVLLLKQVKNMGCLPNLVSYSTVICGLCRSHGRMQEVAGLVDDMLQDG-FEMDATLYS 483
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN------GYVTAEQYF 561
++ FC+AG E A R I + N Q++ +N + AEQ F
Sbjct: 484 CLVGGFCEAGNEEMAMRAFYDSINKNYVINLQSFSFFVNLMCGKGKVIEAEQIF 537
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 133/312 (42%), Gaps = 23/312 (7%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y+++I G+ K+G +++A + + N+ + YC+ KG ++N I
Sbjct: 203 YTTMIRGFCKVGMIDNARKVFDEMICEPNLITCNTLINGYCK--KGDMENAR-------I 253
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ +E + D +I G ++A +D M GC+ L Y +
Sbjct: 254 FLCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYGL 313
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-REARIYDL 472
C EA +L+ + +G++ +V + ++++ + + A F +M R+ D
Sbjct: 314 CLRGNVDEARRLLTKMRLNGVKENVATHLSILKGLSVAGKSEEAIGYFSEMIRKGMKLDA 373
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
K + ++T + +P+ + L E+ + + +N+++ + G L+ A L
Sbjct: 374 K-EHEVVITAYCKMRKPDEAISLLKEM-QAKGISRSVGSFNAVLRILVEIGELDKAVLLL 431
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAF 592
+++ + PN +Y ++I G + E+ + Q G FE +DA
Sbjct: 432 KQVKNMGCLPNLVSYSTVICGLCRSHGRM------QEVAGLVDDMLQDG--FE---MDAT 480
Query: 593 LYALVKGGFFDA 604
LY+ + GGF +A
Sbjct: 481 LYSCLVGGFCEA 492
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI A S D +SA F ++E + S+ I+ L++ ++ + +F D++V D
Sbjct: 135 LIRAYGYSGDTKSAIFWFHKVKEIQQGKCLFSWNAILGVLVKVNQINVAKSFFDQIVNDA 194
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
V+ + ++I FCK G +++A++ MI EPN T +LINGY
Sbjct: 195 VVKPDASTYTTMIRGFCKVGMIDNARKVFDEMI---CEPNLITCNTLINGY 242
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/492 (20%), Positives = 194/492 (39%), Gaps = 31/492 (6%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
++ S T ++ + D+ + ++ + + P+ NS+IA L Q
Sbjct: 87 DVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVL 146
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
++V K+ + D T ++++ ++ A +K M ++ P + L+D
Sbjct: 147 TTMV----KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKM-RSDGVEPDVVTYNSLMD 201
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDAEKVIE 245
KN K+F+ + L KP I L+G Y + ++ + +++
Sbjct: 202 YLCKNGRCTEARKIFDSMTKRGL-------KPEITTYGTLLQG--YATKGALVEMHGLLD 252
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M G+ PN F L YA + E+ + + S M + G + V Y ++I K G
Sbjct: 253 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 312
Query: 306 NLESA----SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
+E A + I L GN+ Y ++ G + LI+E +
Sbjct: 313 RVEDAMLYFEQMIDEGLSPGNI--------VYNSLIHGLCTCNKWERAEELILE---MLD 361
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
GI ++ II + G ++ + D M G + Y + YC + E
Sbjct: 362 RGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 421
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
AT+L+ + S G++ D Y LI + A LFR+M + + +Y I+
Sbjct: 422 ATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQ 481
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
GL + R + + R +++ +N I+H CK +DA R + + + +
Sbjct: 482 GLFQTRRTAAAKELYVGITKSGR-QLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLK 540
Query: 542 PNDQTYLSLING 553
+T+ +I+
Sbjct: 541 LEARTFNIMIDA 552
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 153/363 (42%), Gaps = 23/363 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ N+ + C Q+V A +V+ TM GV P+ ++ + + + G ++
Sbjct: 119 ISPNVVTYNSIIAALCKA-QTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEA 177
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ M G +V Y+SL+ K G A + +M + E TY
Sbjct: 178 IVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIF------DSMTKRGLKPEITTY 231
Query: 334 CEVVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
+++G+ G + GL +L++ +GI + V ++ A ++A +
Sbjct: 232 GTLLQGYATKGALVEMHGLLDLMVR------NGIHPNHYVFSILVCAYAKQEKVEEAMLV 285
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+M G + Y + CK R +A + GL Y++LI T
Sbjct: 286 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 345
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
++ A L +M + I + +I+ + R D +V R+ VK
Sbjct: 346 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV---RIGVKPD 402
Query: 511 --DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
++++I +C AG++++A + L M+ + +P+ TY +LINGY + L+++
Sbjct: 403 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFR 462
Query: 569 EIK 571
E++
Sbjct: 463 EME 465
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 96/232 (41%), Gaps = 11/232 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V ++EK+ + M +GV+P+ ++ L Y L G ++ +L + M G V YS+
Sbjct: 384 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYST 443
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
LI+GY K+ ++ A +L ME S S + TY +++G Q L +
Sbjct: 444 LINGYCKISRMKDA--LVLF----REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 497
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
K SG ++ S I+ L+D A + + + + + A
Sbjct: 498 GITK---SGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALL 554
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
K R EA L + SS+GL + Y + E I + LF M +
Sbjct: 555 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 606
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 68/175 (38%), Gaps = 42/175 (24%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQL--DVGNYDALIEASITSQDFQSAFSLFRD 463
Y L C E+R+ EA +L+ ++ G DV +Y +I D +S + +
Sbjct: 54 YNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNE 113
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M + RI P V +NSII A CKA
Sbjct: 114 MLDQRI--------------------------------SPNVVT----YNSIIAALCKAQ 137
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
++ A L M+ P+ TY S+++G+ ++ Q ++ +K+ +DG
Sbjct: 138 TVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFL----KKMRSDG 188
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 141/334 (42%), Gaps = 24/334 (7%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y+++++GY + G LESA R + TY VV+ G + A+ +
Sbjct: 93 YNAMVAGYCRAGQLESARRL-------AAAVPVPPNAYTYFPVVRALCARGRI---ADAL 142
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
++ G + I+ A G A +L++++A GC++ +G L A
Sbjct: 143 AVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAI 202
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C + EA L+ D+ S G + DV +Y+A+++ ++ + L +M
Sbjct: 203 CDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNI 262
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
++ T+++ L N E + L ++VE P + + + +II CK G LE A
Sbjct: 263 VTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRM----YATIIDGICKEGHLEVAHE 318
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVD 590
L RM +PN Y +L+ G +AE+ W E + ++ K + +
Sbjct: 319 ILNRMPSYGLKPNVVCYNTLLKGLCSAER-------WEETEELLAEMFDKDCPLDDVTFN 371
Query: 591 AFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ + G D V++++E+ E D Y
Sbjct: 372 ILVDFFCQNGLVDRVIELLEQMLERGCMPDVITY 405
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 163/426 (38%), Gaps = 77/426 (18%)
Query: 204 CCRIALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
C + ++DE L ++ P++ + NA L+G C + ++++E M + PN
Sbjct: 203 CDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMA-KRWGCVQELMEEMVRMACPPN 261
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI- 314
+F L GL E++ E+ + M E G + + Y+++I G K G+LE A +
Sbjct: 262 IVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILN 321
Query: 315 ----------LLCL-----GGGNMEQSDFSKETYCE---------------VVKGFLQNG 344
++C G + E+ + ++E E +V F QNG
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 381
Query: 345 NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
V + L+ Q LE G + D +I+ GL D+A +L M ACGC
Sbjct: 382 LVDRVIELL--EQMLE-RGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTI 438
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y LK C R +A L+ + G L+ ++ LI + A L + M
Sbjct: 439 SYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 498
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV------------------------ 500
SY T++ GL + + + L+ +V
Sbjct: 499 LVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRI 558
Query: 501 ----------EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+D + +N++I + CK G E A L M+ PN+ TY L
Sbjct: 559 NKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTIL 618
Query: 551 INGYVT 556
I G +
Sbjct: 619 IRGLAS 624
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 111/232 (47%), Gaps = 12/232 (5%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
GL ++ H +L +M GC+ + +Y + CKE A +++ + S GL+ +V Y
Sbjct: 276 GLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCY 335
Query: 442 DALIEASITSQDFQSAFSLFRDM--REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
+ L++ +++ ++ L +M ++ + D+ ++ ++ +N + + L+++
Sbjct: 336 NTLLKGLCSAERWEETEELLAEMFDKDCPLDDV--TFNILVDFFCQNGLVDRVIELLEQM 393
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+E + + ++I+ FCK G +++A L+ M +PN +Y ++ G +AE+
Sbjct: 394 LERGCMP-DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 452
Query: 560 YFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
W + + +S Q+G + + L K G + ++++++
Sbjct: 453 -------WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 497
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 12/219 (5%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN + L+G C + V DAE ++ M G N +F L KGL E+ +
Sbjct: 434 KPNTISYTIVLKGLCSAERWV-DAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
EL M G S ++ YS++I G K G + A + + M S T Y
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNV------MVNKGMSPNTIIYS 546
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+ + G + + + ++ + I D + +IS+ G +++A L M
Sbjct: 547 SIASALSREGRINKVIQMF---DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 603
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+ GC Y ++ E EA +++ ++ S G
Sbjct: 604 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
Length = 938
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 156/361 (43%), Gaps = 41/361 (11%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNES 257
+VFEE L N++ P+I N G C GL V + +++ M+ G+ PN
Sbjct: 573 QVFEE----MLKANIE---PDIVTYNILASGFCKSGL--VMEVFDLLDRMADQGLEPNSL 623
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
++G + G + L +++ E G V YSS++ GY+ G + A +
Sbjct: 624 TYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRV 683
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGII 375
GN+ FS +++ + GNV+G +N+ I+ + P I + +I
Sbjct: 684 ARQGNLVDH-FSCS---KLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSK-----LI 734
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
S G DKAH +M G SV + VY + YCK R EA QL + +++ G++
Sbjct: 735 SIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIK 794
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
DV Y L++ + Q + ++ R S+L L NH L +
Sbjct: 795 PDVIAYTVLLDGHLKETLQQGWEGIAKERR---------SFL-----LRANHNKLLSS-- 838
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++D ++E + +I CKA L +A+ M+ P+ Y +LINGY
Sbjct: 839 ----MKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYC 894
Query: 556 T 556
+
Sbjct: 895 S 895
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 154/378 (40%), Gaps = 23/378 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEK 274
+ P++Y A + + + V +A +V M+ +GV+P+ + FL L
Sbjct: 338 LTPDVYT-FAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLA 396
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
V L+ + N + + Y+ ++ G K L+ A + L + S+ Y
Sbjct: 397 YVILQEI-NREKVPVEAMAYNMVMDGLCKEMRLDEAEKL----LENKARQGSNPDVYGYS 451
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+++ + + GN L N + + + GI + + ++ LG++ +A + +
Sbjct: 452 YLIRSYCKMGN---LINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKF 508
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + +Y + YCK EA +L+ ++ GL D +Y LI +
Sbjct: 509 KDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEM 568
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
Q+A +F +M +A I +Y + +G ++ + LD + D +E + +
Sbjct: 569 QNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMA-DQGLEPNSLTYGI 627
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
I FC+ G L +A+ + + + Y S++ GY+ + M++ + R
Sbjct: 628 AIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVAR-- 685
Query: 575 STDGQKGIKFEHNLVDAF 592
+ NLVD F
Sbjct: 686 ----------QGNLVDHF 693
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 129/292 (44%), Gaps = 12/292 (4%)
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
Y G + V+L + M G + + Y+ LISGY G +++A + L N+E
Sbjct: 527 YCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKA-NIEP 585
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
TY + GF ++G V + +L+ + Q LEP+ + + G I+ C L
Sbjct: 586 DIV---TYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSL----TYGIAIVGFCRGGNL 638
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
S+ A + + + G +Y + Y T A L + ++ G +D +
Sbjct: 639 SE-AEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSK 697
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI + Q A ++ + M E + SY +++ +N + + ++V+
Sbjct: 698 LINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQR- 756
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+ V + +++ +CKAGRL++A + +M L +P+ Y L++G++
Sbjct: 757 GLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHL 808
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 22/250 (8%)
Query: 221 YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
++C+ + C + +V A V + M V P+ S+ L +Y G +K
Sbjct: 693 FSCSKLINDLCR-VGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFH 751
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL---------------LCLGGGNMEQ 325
M + G S ++ Y+ L++GY K G L+ A + + + L G E
Sbjct: 752 DMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKET 811
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
E + + FL N L + + + Q +EP D +I
Sbjct: 812 LQQGWEGIAKERRSFLLRANHNKLLSSMKDMQ-IEP-----DVPCYTVLIDGKCKAEYLV 865
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A + DEM G + Y + YC + ++A L+ ++ G++ D + L
Sbjct: 866 EARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLN 925
Query: 446 EASITSQDFQ 455
++S+ S+ Q
Sbjct: 926 QSSLRSRKIQ 935
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 147/346 (42%), Gaps = 16/346 (4%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
EN M P + NA + G Q + K +E M +G+ P+ ++ L Y G
Sbjct: 329 ENEGIM-PTVVTYNAMIHGLLQSGQIEAAQAKFVE-MRAMGLLPDVITYNSLLNGYCKAG 386
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
Q++ + L + G + ++ Y+ LI GY +LG+LE A R L +EQ
Sbjct: 387 NQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARR-----LKEEMVEQGCLPD 441
Query: 331 -ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
TY ++KG + NV LA ++ G+ D I A + LG K+
Sbjct: 442 VYTYTILMKG---SHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQ 498
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ + + G S Y + CK +A +L+M + S+GLQ D Y LI A
Sbjct: 499 LREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHC 558
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF--LDEVVEDPRVEV 507
+ A F DM + +Y I+ R L +A+ +++E+ VE
Sbjct: 559 ERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCR--RGNLYSAYGWFRKMLEE-GVEP 615
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N +IHA C+ GR + A R M+ PN TY LI+G
Sbjct: 616 NEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 148/376 (39%), Gaps = 47/376 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ CN L D V M LG+ P+ ++ L ++ +G ++KI
Sbjct: 192 VAPDVKDCNKVLR-VLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKI 250
Query: 276 VELESLMNEFGFS--SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD-FSKET 332
L M G S V Y+ +I+G + G LE A+ + M S S T
Sbjct: 251 DMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVE------EMRLSKKASSFT 304
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++ G L G VK + +L +E +E GI+ +I + G + A +
Sbjct: 305 YNPLITGLLARGFVKKVDDLQLE---MENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFV 361
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM A G + Y L YCK EA L D+ +GL V Y+ LI+
Sbjct: 362 EMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLG 421
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTG-----------------LMENHRPELMA-- 493
D + A L +M E +Y +M G L + RP+ A
Sbjct: 422 DLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYN 481
Query: 494 --------------AF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+F L EV+ + T +N +I CK G L+DA+ + +MI
Sbjct: 482 TRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISN 541
Query: 539 QFEPNDQTYLSLINGY 554
+P+ TY LI+ +
Sbjct: 542 GLQPDCITYTCLIHAH 557
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 157/370 (42%), Gaps = 17/370 (4%)
Query: 257 SSFGFLAYLYAL--KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
SSF + + L +G +K+ +L+ M G +V Y+++I G ++ G +E+A
Sbjct: 301 SSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKF 360
Query: 315 LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
+ G + TY ++ G+ + GN K L + ++ + V+ ++ +
Sbjct: 361 VEMRAMGLLPDVI----TYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNI---L 413
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
I LG ++A + +EM GC + Y +K A + ++ S GL
Sbjct: 414 IDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGL 473
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+ D Y+ I A IT D +F L + I +Y ++ GL + +
Sbjct: 474 RPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEE 533
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ +++ + ++ + +IHA C+ G L +A++ MI P+ TY +I+ Y
Sbjct: 534 LMMQMISN-GLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAY 592
Query: 555 VTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+S + RK+ +G + + +N++ ++AL + G + + E
Sbjct: 593 CRRGNLYSAYGWF----RKMLEEGVEPNEITYNVL---IHALCRMGRTQLAYRHFYEMLE 645
Query: 615 MKVFVDKWKY 624
+ +K+ Y
Sbjct: 646 RGLVPNKYTY 655
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N++IH ++G++E A+ M + P+ TY SL+NGY A L+++ +++
Sbjct: 340 YNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLR 399
Query: 572 RKISTDGQKGIKFEHN-LVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFME 630
R G +N L+D + + G + ++ E+ E D + Y
Sbjct: 400 RA----GLAPTVLTYNILIDGY----CRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKG 451
Query: 631 NHKKLKVAKLRK 642
+H +A R+
Sbjct: 452 SHNVCSLAMTRE 463
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 144/357 (40%), Gaps = 34/357 (9%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PN+ L+G C +A ++ E M G++P+E ++ L G E
Sbjct: 526 DGIIPNVITYTTLLQGQC-DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAE 584
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
E S + G + V+Y++LI G+ K GN + A+ I + G S TY
Sbjct: 585 ---EAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS----YTY 637
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ + K L + ++ GI +I + G D A + +E
Sbjct: 638 SVLLHALCKQ---KRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + G Y + +YCKE R +A L++ + G+ DV Y+ LI+
Sbjct: 695 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 754
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP----------------ELMAAFLD 497
AFS + M A +Y ++ L++ + ++ L+
Sbjct: 755 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLE 814
Query: 498 EVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+V+ +P V ++S+I FCKAGRLE+A L M PN+ Y LI
Sbjct: 815 RMVKHGLNPTVTT----YSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 159/385 (41%), Gaps = 34/385 (8%)
Query: 218 PNIYACNAALEGCCYG-LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-QEKI 275
P++ NA + G Y L ++DA K+ E M G P++ ++ L Y GL +K
Sbjct: 321 PSVMTYNAMIVG--YSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY-----GLCDQKT 373
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK-- 330
E E L+N GF+ +V +++LI+GY + A R N S K
Sbjct: 374 EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRM-------KNKMMSSKCKLD 426
Query: 331 -ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
+ + +++ ++ +K L+ E + +G+V + II G D A
Sbjct: 427 LQVFGKLINSLIKKDRLKEAKELLNE---ISANGLVPNVITYTSIIDGYCKSGKVDIALE 483
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+L M GC Y + K+ + +A L+ + G+ +V Y L++
Sbjct: 484 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 543
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
DF +AF LF M + + + +Y + L + R E +F +V K
Sbjct: 544 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKV 600
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+ + ++I F KAG + A + RMI P+ TY L++ ++ L
Sbjct: 601 Y-YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEAL----P 655
Query: 570 IKRKISTDGQKGIKFEHN-LVDAFL 593
I ++S G K F + L+D L
Sbjct: 656 ILDQMSLRGIKCTIFAYTILIDEML 680
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 131/338 (38%), Gaps = 51/338 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ + ++G C V A +V++ M G +PN ++ L Y K +
Sbjct: 460 PNVITYTSIIDGYCKS-GKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMA 518
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCE 335
L + M + G ++ Y++L+ G + ++A R + MEQ+ + Y
Sbjct: 519 LLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEM------MEQNGLKPDEHAYAV 572
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ + G + + I+ G+ + + +I G +D A ++++ M
Sbjct: 573 LTDALCKAGRAEEAYSFIVR------KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMI 626
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC+ Y L A CK+ R EA ++ +S G++ + Y LI+ +
Sbjct: 627 DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHD 686
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A ++ +M + H+P +
Sbjct: 687 HAKRMYNEMTSS------------------GHKPSATT------------------YTVF 710
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
I+++CK GRLEDA+ + +M P+ TY LI+G
Sbjct: 711 INSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 156/374 (41%), Gaps = 35/374 (9%)
Query: 263 AYLYALKGL-----QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
Y +AL+ L E + + S + + G V Y+++I Y K G+L +A R L
Sbjct: 150 CYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLL 209
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL-----IIEAQKLEPSGIVVDRSVGF 372
L GG +E F+ +V G+ + G ++ L ++ Q+ E S ++ +
Sbjct: 210 LEGG-LEPETFTCNA---LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQ---- 261
Query: 373 GIISA-CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
G+ A CV KA + M GCS + + + CK R +A L +
Sbjct: 262 GLCDAKCVR-----KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ 316
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
+G+ V Y+A+I A + M + + +Y T++ GL + E
Sbjct: 317 NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEA 376
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+ V E V T + ++I+ +C A + +DA R +M+ + + + Q + LI
Sbjct: 377 EELLNNAVKEGFTPTVVT--FTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 434
Query: 552 NGYVTAEQYFSVLMMWHEIKRKISTDG-QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
N + ++ L E+ +IS +G + +++D + K G D ++V++
Sbjct: 435 NSLIKKDR----LKEAKELLNEISANGLVPNVITYTSIIDGY----CKSGKVDIALEVLK 486
Query: 611 KSQEMKVFVDKWKY 624
+ + W Y
Sbjct: 487 MMERDGCQPNAWTY 500
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A+++ M+ G +P+ +++ Y +G E +L M G + +V Y+ LI
Sbjct: 688 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 747
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNG-------NVKGLANL 352
G +G ++ A T+ +G + + TYC ++K L+ + G+ NL
Sbjct: 748 GCGHMGYIDRAFSTLKRMVGA----SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNL 803
Query: 353 IIEAQKLEPSGIVVDRSVGFGI----------ISACVNLGLSDKAHSILDEMNACGCSVG 402
I +L+ + +++R V G+ I+ G ++A +LD M G S
Sbjct: 804 I----ELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPN 859
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+Y +K C +A V +S G Q + +Y L+ DF+ SLF
Sbjct: 860 EDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFC 919
Query: 463 DMRE 466
D+ E
Sbjct: 920 DLLE 923
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 138/358 (38%), Gaps = 47/358 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P + CNA + G C + A + M ++G + NE S+ L K
Sbjct: 214 LEPETFTCNALVLGYCR-TGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKA 272
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L +M G S + ++ LISG K G +
Sbjct: 273 LVLFLMMKRDGCSPNVRAFTFLISGLCKSGRV---------------------------- 304
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
G A L+ +A + +G+V +I LG + A I + M
Sbjct: 305 ------------GDARLLFDA--MPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELME 350
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC Y + C + +T EA +L+ + G V + LI ++ F
Sbjct: 351 KNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 409
Query: 456 SAFSLFRDMREARI-YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A + M ++ DL+ + ++ L++ R + L+E+ + V + S
Sbjct: 410 DALRMKNKMMSSKCKLDLQ-VFGKLINSLIKKDRLKEAKELLNEISANGLVP-NVITYTS 467
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
II +CK+G+++ A L+ M +PN TY SL+ G V ++ + + ++++
Sbjct: 468 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 525
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 138/329 (41%), Gaps = 54/329 (16%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
GV PN ++ L +G E+ V + M G + V Y++L++ + + G L+ A
Sbjct: 5 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
R + L GN + + T+ +V G + G ++G
Sbjct: 65 ERVVSLMREEGNAKPNLV---TFNSMVNGLCKAGRMEG---------------------- 99
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
A + DEM G + + Y L YCK E+ + +++
Sbjct: 100 ----------------ARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 143
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
GL DV + +LI A+ + + + A +L MRE + + ++ ++ G +
Sbjct: 144 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK---- 199
Query: 491 LMAAFLDEV---VEDPR---VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
FLD+ VE+ R ++ +N++I+ +CK GR++ A+ +R M + +P+
Sbjct: 200 ---GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDV 256
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
TY ++I+GY S + ++ +K
Sbjct: 257 VTYSTIISGYCKVGNLDSAFQLNQKMLKK 285
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 154/360 (42%), Gaps = 16/360 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+Y N + C + +A V+ M G PN ++ L + G +
Sbjct: 8 PNVYTYNILVRALC-ARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAER 66
Query: 278 LESLMNEFGFSS-QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
+ SLM E G + +V ++S+++G K G +E A + M + + + +Y
Sbjct: 67 VVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVF------DEMVREGLAPDVVSYN 120
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G+ + G L + ++ G+V D +I A G ++A +++ +M
Sbjct: 121 TLLSGYCKVGC---LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 177
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + + + +CK+ +A V ++ G+Q V Y+ALI
Sbjct: 178 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 237
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWN 513
A L R+M R+ +Y TI++G + L +AF L++ + V ++
Sbjct: 238 DLARELIREMEAKRVKPDVVTYSTIISGYCK--VGNLDSAFQLNQKMLKKGVLPDAITYS 295
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
S+I C+ RL DA M+ L +P++ TY +LI+G+ L + E+ RK
Sbjct: 296 SLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 355
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 146/359 (40%), Gaps = 18/359 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG-VRPNESSFGFLAYLYALKGLQEKIV 276
PN N + C + + AE+V+ M G +PN +F + G E
Sbjct: 43 PNAVTYNTLVAAFCRAGE-LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 101
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
++ M G + +V Y++L+SGY K+G L + M Q + T+
Sbjct: 102 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF------SEMTQRGLVPDVVTFT 155
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ + GN++ L+ ++ G+ ++ +I G D A ++EM
Sbjct: 156 SLIHATCKAGNLEQAVALV---AQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 212
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
CG + Y + YCK R A +L+ ++ + ++ DV Y +I +
Sbjct: 213 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 272
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
SAF L + M + + +Y +++ GL E R + +++ V+ + +
Sbjct: 273 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ-LGVQPDEFTYTT 331
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV----TAEQYFSVLMMWHE 569
+I CK G +E A MI P+ TY LING T E + + ++HE
Sbjct: 332 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHE 390
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 164/375 (43%), Gaps = 39/375 (10%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
KVF+E R + + P++ + N L G C + + ++ V M+ G+ P+ +
Sbjct: 102 KVFDEMVR-------EGLAPDVVSYNTLLSGYCK-VGCLHESLAVFSEMTQRGLVPDVVT 153
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
F L + G E+ V L + M E G V +++LI G+ K G L+ A +
Sbjct: 154 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV---- 209
Query: 319 GGGNMEQSDFSKETYC--EVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGI 374
M + C ++ G+ + G + LI +EA++++P VV S I
Sbjct: 210 --EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD--VVTYST---I 262
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
IS +G D A + +M G Y ++ C+E R +A +L ++ G+
Sbjct: 263 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 322
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENHRPELMA 493
Q D Y LI+ + + A SL +M R+ + D+ +Y ++ GL ++ R +
Sbjct: 323 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV-TYSVLINGLSKSARTKEAH 381
Query: 494 AFLDEVV-EDPRVEVKTHD----------WNSII---HAFCKAGRLEDAKRTLRRMIFLQ 539
L ++ EDP + +D + S++ FC G +++A + + M+
Sbjct: 382 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 441
Query: 540 FEPNDQTYLSLINGY 554
++ + Y LI+G+
Sbjct: 442 WKLDGSVYSILIHGH 456
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 94/462 (20%), Positives = 171/462 (37%), Gaps = 45/462 (9%)
Query: 59 QQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQD 118
+++ + N+ + + ++ + A K F + L P N+L++ +
Sbjct: 72 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGC 131
Query: 119 NHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFE 178
H F+ + + + D T +L+ + A A ALV M + M
Sbjct: 132 LHESLAVFSEMT----QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187
Query: 179 LWGGFLVDICRKNSNFVAFLKVFE-ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSV 237
+ + C+K A L V E C I +P++ NA + G C L +
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGI---------QPSVVCYNALINGYCK-LGRM 237
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
A ++I M V+P+ ++ + Y G + +L M + G + YSSL
Sbjct: 238 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 297
Query: 298 ISGYVKLGNLESASRTI--LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
I G + L A +L LG ++ +F TY ++ G + GNV+ +L E
Sbjct: 298 IRGLCEEKRLNDACELFENMLQLG---VQPDEF---TYTTLIDGHCKEGNVEKALSLHDE 351
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL---------------DEMNACGCS 400
+ G++ D +I+ + +AH +L D + C
Sbjct: 352 MIR---KGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK 408
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
V LK +C + EA ++ + +LD Y LI + + A S
Sbjct: 409 AEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSF 468
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
+ M + S ++++ GL E E M D ++D
Sbjct: 469 HKQMLRSGFSPNSTSTISLVRGLFE----EGMVVEADNAIQD 506
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 200/512 (39%), Gaps = 81/512 (15%)
Query: 77 KSLLTNNTDEAWKSFKSLT-ANSLF-----------PSKPVTNSLIAHLSSLQDNHNLKR 124
K LL N++ A SL+ A SLF PS+P ++LI DN R
Sbjct: 4 KRLLNNSSSIAHTQPHSLSDAVSLFHRTIDNDPTSPPSEPACSTLI-------DNLRKAR 56
Query: 125 AFASVVYVIEKNPKLL---DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWG 181
+ +VV V K L F ++ L S N + + AF+++ M K + +
Sbjct: 57 QYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLN 116
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
L CR A + +F + + N D + P+ N + G C + +++A
Sbjct: 117 LVLKGFCRSGQCDKA-MSLFSQ-----MKRNYDCVVPDCVTYNTLVNGFCKA-KRLAEAR 169
Query: 242 KVIETMSVLG-VRPNESSFGFLAYLYALKG-LQEKIVELESLMNEFGFSSQMVFYSSLIS 299
+ E M G RPN ++ L Y G + E + LE + E G + + YSSLIS
Sbjct: 170 VLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMERE-GLKADVFVYSSLIS 228
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI--IE 355
+ G++E+ M + S TY +++G + G + + ++ +
Sbjct: 229 AFCGEGDIETGRELF------DEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMT 282
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
A+ + P +V + G+ C N G + A +LD M G G Y + CK
Sbjct: 283 ARGVRPD-VVAYTVLADGL---CKN-GRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCK 337
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
E R +A +V + G + D Y+ L++ + A L++ + + +
Sbjct: 338 EDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFH----- 392
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
V+ N++I CK GR+ DA R M
Sbjct: 393 -----------------------------VKPDVFTCNNLIQGLCKEGRVHDAARIHSSM 423
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+ + + N TY LI GY+ A + L +W
Sbjct: 424 VEMGLQGNIVTYNFLIEGYLAARKLIEALKLW 455
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 122/320 (38%), Gaps = 14/320 (4%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+A ++++ M+ GVRP+ ++ LA G +++ LM + G + Y+ ++
Sbjct: 273 EASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVV 332
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL----II 354
+G K ++ A + + + G + TY ++KG G + +L +
Sbjct: 333 NGLCKEDRMDDAFGVVEMMVKKGKKPDA----VTYNTLLKGLCGAGKIHEAMDLWKLLLS 388
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
E ++P + +I G A I M G + Y ++ Y
Sbjct: 389 EKFHVKPDVFTCNN-----LIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYL 443
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+ EA +L SG + Y +I Q A LF M+++ I
Sbjct: 444 AARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVI 503
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
Y +MT L E + E+ + V +N II KAG ++ AK L
Sbjct: 504 DYNALMTSLCREDSLEQARSLFQEM-RNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSE 562
Query: 535 MIFLQFEPNDQTYLSLINGY 554
M + P+ T+ LIN +
Sbjct: 563 MFMMDLVPDAVTFSILINRF 582
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 41/256 (16%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL--AYLYALKGLQE 273
+KP+++ CN ++G C V DA ++ +M +G++ N ++ FL YL A K ++
Sbjct: 393 VKPDVFTCNNLIQGLCKE-GRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEA 451
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG--------NMEQ 325
++L E GFS + YS +I+G K+ L A G N
Sbjct: 452 --LKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALM 509
Query: 326 SDFSKETYCE-----------------------VVKGFLQNGNVKGLANLIIEAQKLEPS 362
+ +E E ++ G L+ G+VK L+ E ++
Sbjct: 510 TSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMD-- 567
Query: 363 GIVVDRSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
+V +V F I I+ LG+ D+A + ++M +CG G+ V+ LK Y + T +
Sbjct: 568 --LVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEK 625
Query: 422 ATQLVMDISSSGLQLD 437
L+ ++ + LD
Sbjct: 626 IISLLHQMADKDVVLD 641
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 101/487 (20%), Positives = 187/487 (38%), Gaps = 53/487 (10%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T +TL+ A A A L + M K P + L+D K+ L +
Sbjct: 148 DCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGL 207
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
EE R L K +++ ++ + C G + ++ + M V PN ++
Sbjct: 208 LEEMEREGL-------KADVFVYSSLISAFC-GEGDIETGRELFDEMLRRKVSPNVVTYS 259
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L G + E+ M G +V Y+ L G K G A + + L +
Sbjct: 260 CLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQK 319
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVK---GLANLIIEAQKLEPSGIVVDRSV----GFG 373
G + TY VV G + + G+ ++++ K +P + + + G G
Sbjct: 320 GE----EPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGK-KPDAVTYNTLLKGLCGAG 374
Query: 374 IISACVNLG---LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
I ++L LS+K H D GL CKE R +A ++ +
Sbjct: 375 KIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGL----------CKEGRVHDAARIHSSMV 424
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
GLQ ++ Y+ LIE + ++ A L++ E+ +Y ++ GL +
Sbjct: 425 EMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLS 484
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+ + ++D + D+N+++ + C+ LE A+ + M + + ++ +
Sbjct: 485 VARGLFCK-MKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNII 543
Query: 551 INGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV-DAFLYALV-----KGGFFDA 604
I+G + A S + E+ F +LV DA ++++ K G D
Sbjct: 544 IDGTLKAGDVKSAKELLSEM-------------FMMDLVPDAVTFSILINRFSKLGMLDE 590
Query: 605 VMQVVEK 611
M + EK
Sbjct: 591 AMGLYEK 597
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 157/363 (43%), Gaps = 13/363 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ ++G C Q V A+ V + M GVRPN ++ L + Y G +++V+
Sbjct: 200 PNVVTYTTVIDGLCKA-QMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQ 258
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M+ G V Y+ L+ K G A R I L ++ Y ++
Sbjct: 259 MLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEA-RNIFDSLIRKGIKPH---VTIYGILL 314
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G+ G + + + + + +G+ D + + +A + D+A I D+M
Sbjct: 315 HGYATEGALSEMHSFL---DLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQ 371
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
S G+ Y + A CK R +A + + G+ D+ + +L+ T ++ A
Sbjct: 372 WLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKA 431
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH--DWNSI 515
LF ++ + I + +M L R +D ++ RV+V+ +N++
Sbjct: 432 EKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLML---RVDVRPDVISYNTL 488
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
+ C GR+++A + L M+ + +P++ TY +L++GY A + ++ E+ K
Sbjct: 489 VDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGL 548
Query: 576 TDG 578
T G
Sbjct: 549 TPG 551
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 155/370 (41%), Gaps = 50/370 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQ-SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+KP++ L G Y + ++S+ ++ M GV P+ F + YA K + ++
Sbjct: 303 IKPHVTIYGILLHG--YATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDE 360
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA------------SRTIL----LCL 318
+ + M + S +V Y +LI KLG ++ A + I L
Sbjct: 361 AMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVY 420
Query: 319 GGGNMEQSDFSKETYCEVV-KGFLQNG---NVKGLANL-----IIEAQKLEPSGIVVDRS 369
G +++ + +++ + EV+ +G N N+ + NL ++EAQ+L + VD
Sbjct: 421 GLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNIL-MCNLCREGRVMEAQRLIDLMLRVD-- 477
Query: 370 VGFGIIS-------ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
V +IS C+ G D+A +LD M + G Y L YCK R +A
Sbjct: 478 VRPDVISYNTLVDGHCLT-GRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDA 536
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM----REARIYDLKGSYLT 478
L ++ GL V Y+ ++ F A L+ +M R+ IY +Y
Sbjct: 537 YSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIY----TYTI 592
Query: 479 IMTGLMENH-RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
I+ GL N+ E F +D ++++ T N +I A K GR EDA +
Sbjct: 593 ILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFT--INIMIGALLKGGRKEDAMDLFATISA 650
Query: 538 LQFEPNDQTY 547
P+ +TY
Sbjct: 651 YGLVPDVETY 660
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 127/301 (42%), Gaps = 36/301 (11%)
Query: 329 SKETYCEVVKGFLQNGNVK-GLA--NLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLS 384
S TY ++ F + G +K G A LI++ +G ++ +V FG ++ +
Sbjct: 91 SSCTYTILIGCFCRMGRLKHGFAAFGLILK------TGWSLNNTVIFGQLLKGLCDAKRV 144
Query: 385 DKAHSIL-DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG---LQLDVGN 440
D+A IL M GC++ + Y LK C E R EA +L+ ++ G +V
Sbjct: 145 DEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVT 204
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y +I+ +Q A +F+ M + + +Y ++ G + + + + L
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQ--- 261
Query: 501 EDPRVEVKTHDW--NSIIHA-----FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
E+ TH + +I+A CK GR +A+ +I +P+ Y L++G
Sbjct: 262 -----EMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHG 316
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
Y T E S E+ + + G+ +H++ + A K D M + +K +
Sbjct: 317 YAT-EGALS------EMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMR 369
Query: 614 E 614
+
Sbjct: 370 Q 370
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/366 (18%), Positives = 150/366 (40%), Gaps = 21/366 (5%)
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
++A + +++ G++P+ + +G L + YA +G ++ LM G S ++ +
Sbjct: 289 TEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIM 348
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIE 355
+ Y K ++ A M Q S Y ++ + G V + +++
Sbjct: 349 FNAYAKKAMIDEAMHIF------DKMRQQWLSPGVVNYGALIDALCKLGRVD---DAVLK 399
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
++ G+ D V ++ + +KA + E+ G + + + C+
Sbjct: 400 FNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCR 459
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
E R EA +L+ + ++ DV +Y+ L++ + A L M + + +
Sbjct: 460 EGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFT 519
Query: 476 YLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
Y T++ G + R + + F + +++ V T +N+I+H + GR +AK
Sbjct: 520 YNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVT--YNTILHGLFQIGRFCEAKELYLN 577
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY 594
MI + + + TY ++NG M+ + K ++ + ++ +
Sbjct: 578 MINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSL-------CSKDLQLDIFTINIMIG 630
Query: 595 ALVKGG 600
AL+KGG
Sbjct: 631 ALLKGG 636
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 155/373 (41%), Gaps = 47/373 (12%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ A NA L S++ A + ++M GV PN ++ L +G +++ +
Sbjct: 114 PSVLAYNAVLLA--LSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALS 171
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M G +V Y++L++ + + G ++ A R + + L GG + T+ +V
Sbjct: 172 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKP----NLVTFNSMV 227
Query: 338 KGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
G + G ++ + E + L P G+ + VG G A G S +A S+ EM
Sbjct: 228 NGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVG-GYCKA----GCSHEALSVFAEMT 282
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + + + CK A LV + GLQ++ + ALI+
Sbjct: 283 QKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD 342
Query: 456 SAFSLFRDMREARIYDLKGSYLTI-----MTGLMENHR------------PELM------ 492
A R MR+ RI Y + M G M+ R P+++
Sbjct: 343 DALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 402
Query: 493 ----------AAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
+AF L++ + + V ++S+I C+ RL DA + MI L +
Sbjct: 403 SAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQ 462
Query: 542 PNDQTYLSLINGY 554
P++ TY SLI+G+
Sbjct: 463 PDEFTYTSLIDGH 475
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 156/348 (44%), Gaps = 19/348 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KPN+ N+ + G C + DA KV + M G+ P+ S+ L Y G +
Sbjct: 216 LKPNLVTFNSMVNGMCKA-GKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEA 274
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSK--ET 332
+ + + M + G +V ++SLI K GNLE A + + G M + F+ +
Sbjct: 275 LSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDG 334
Query: 333 YCEVVKGFLQNG--NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
+C+ KGFL + V+G+ +++PS + + +I+ +G D+A +
Sbjct: 335 FCK--KGFLDDALLAVRGMRQC-----RIKPSVVCYN-----ALINGYCMVGRMDEAREL 382
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L EM A G + Y + AYCK T A +L + G+ D Y +LI
Sbjct: 383 LHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCE 442
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ A LF++M + + + +Y +++ G + E + D++V+ V
Sbjct: 443 EKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVK-AGVLPDVV 501
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
++ +I+ K+ R +A++ L ++ + P + Y +L++ AE
Sbjct: 502 TYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAE 549
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 22/219 (10%)
Query: 406 YVPTLKAY------CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
YVP++ AY + A + + S G+ +V Y+ LI A + A S
Sbjct: 112 YVPSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALS 171
Query: 460 LFRDMREARIYDLKGSYLTIMTGLME----NHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+ RDMR A +Y T++ + L+ LD ++ V +NS+
Sbjct: 172 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVT-----FNSM 226
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
++ CKAG++EDA++ M+ P+ +Y +L+ GY A L ++ E+
Sbjct: 227 VNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT---- 282
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
QKGI + + ++ + K G + + +V + +E
Sbjct: 283 ---QKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRE 318
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 138/307 (44%), Gaps = 15/307 (4%)
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS-DFSKETYCEVVKGFLQ 342
+ G + + ++ L+ +V+LG L SA + M +S + T+ ++ G +
Sbjct: 179 DAGMAPETRLFNVLMRDFVRLGELVSARKVF------DEMRRSVQPTVVTFNTLISGMCR 232
Query: 343 NGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
++ + L E + G+ D +I G + A + +EM G +
Sbjct: 233 ARDLDAVDGLYKEMSDV---GVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPN 289
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
V+ + A+CKE L D+ G+ D+ Y+AL+ +++ ++A S+
Sbjct: 290 AVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVE 349
Query: 463 DMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKA 522
+M+ A + K +Y T++ G ++ + + MA + + + + V + + ++I KA
Sbjct: 350 EMKNAGLKPDKVTYTTLIDGCCKDGKLD-MAMDIKQKMAEKEVSLDEVTYTALISGLSKA 408
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGI 582
GR DA+R LR M+ EP++ TY +I+ + + + E++ K G+K
Sbjct: 409 GRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNK----GKKPG 464
Query: 583 KFEHNLV 589
+N++
Sbjct: 465 VVTYNVI 471
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 145/348 (41%), Gaps = 44/348 (12%)
Query: 206 RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
R DE ++P + N + G C + + + + + MS +GV+P+ ++G L
Sbjct: 206 RKVFDEMRRSVQPTVVTFNTLISGMCRA-RDLDAVDGLYKEMSDVGVKPDVYTYGALIKG 264
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
+ G E V++ + M + G + V +++LI + K GN+ + G M
Sbjct: 265 FCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVM-- 322
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
D Y +V G + N+K +++ ++++ +G+ D+ +I C G D
Sbjct: 323 PDLV--AYNALVNGLCRARNLKAAESIV---EEMKNAGLKPDKVTYTTLIDGCCKDGKLD 377
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
A I +M S+ Y + K R +A +++ ++ + L+ D Y +I
Sbjct: 378 MAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVI 437
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+A D ++ F L ++M+ KG ++T
Sbjct: 438 DAFCRKGDVKTGFKLLKEMQN------KGKKPGVVT------------------------ 467
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N I++ CK G++++A L M+ + P+D TY L++G
Sbjct: 468 ------YNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDG 509
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 140/345 (40%), Gaps = 31/345 (8%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ--MVFYSSLISGYVKLGNLE 308
G+ P F L + G ++V + +E S Q +V +++LISG + +L+
Sbjct: 181 GMAPETRLFNVLMRDFVRLG---ELVSARKVFDEMRRSVQPTVVTFNTLISGMCRARDLD 237
Query: 309 SASRTILLCLGGGNMEQSDFSKE----TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
+ + G E SD + TY ++KGF + G ++ + E + +G+
Sbjct: 238 A--------VDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRD---TGV 286
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ V +I A G + + +M G L Y + C+ A
Sbjct: 287 NPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAES 346
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
+V ++ ++GL+ D Y LI+ A + + M E + + +Y +++GL
Sbjct: 347 IVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLS 406
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
+ RP L E++E +E + +I AFC+ G ++ + L+ M +P
Sbjct: 407 KAGRPVDAERVLREMME-AALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGV 465
Query: 545 QTYLSLINGYVTAEQYFSVLMMWH----------EIKRKISTDGQ 579
TY ++NG Q + M+ H +I I DGQ
Sbjct: 466 VTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQ 510
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 8/199 (4%)
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
V D +Q V ++ LI ++D + L+++M + + +Y ++ G
Sbjct: 208 VFDEMRRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCR 267
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
R E +E+ D V + ++I A CK G + + M P+
Sbjct: 268 TGRMENAVKMFNEM-RDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLV 326
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAV 605
Y +L+NG A + + E+K G+K + + K G D
Sbjct: 327 AYNALVNGLCRARNLKAAESIVEEMK-------NAGLKPDKVTYTTLIDGCCKDGKLDMA 379
Query: 606 MQVVEKSQEMKVFVDKWKY 624
M + +K E +V +D+ Y
Sbjct: 380 MDIKQKMAEKEVSLDEVTY 398
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 168/392 (42%), Gaps = 23/392 (5%)
Query: 193 NFVAFLKVFEECCRIA--LDENLDF-------MKPNIYACNAALEGCCYGLQSVSDAEKV 243
N AF KV C+ L+ L M N++ N + G C + + +A ++
Sbjct: 186 NLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR-LPEAVRL 244
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGL-QEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
++ M V P+ ++ L K + QE + L +MN+ G Y+++I GY
Sbjct: 245 VDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ-GCLPDDFTYNTIIDGYC 302
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
K+ ++ A+ + + G + + TYC ++ G G+V+ L EAQ
Sbjct: 303 KISMVQEATELLKDAVFKGFVPD----QVTYCSLINGLCAEGDVERALELFNEAQA---K 355
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
GI D V ++ GL A +++EM GC + Y + CK ++A
Sbjct: 356 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 415
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
T ++ D G DV ++ LI+ SA L M E I +Y +++ G
Sbjct: 416 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 475
Query: 483 LMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
L + + E+ F + +++ T +N +I FC++ ++E+A + + +M
Sbjct: 476 LCKAGKVNEVNETFQEMILKGCHPNPIT--YNILIENFCRSNKMEEASKVIVKMSQEGLH 533
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
P+ ++ +LI G+ +++ +++ K
Sbjct: 534 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 565
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/339 (19%), Positives = 143/339 (42%), Gaps = 11/339 (3%)
Query: 233 GLQSVSDAEKVIETMS---VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
GL + D E+ +E + G++P+ + L L+GL +++ + M E G
Sbjct: 335 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 394
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
+ Y+ +I+G K+GN+ A+ + + G + T+ ++ G+ + +
Sbjct: 395 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV----FTFNTLIDGYCKRLKLDSA 450
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
L+ +++ GI D +++ G ++ + EM GC Y
Sbjct: 451 LQLV---ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 507
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ +C+ ++ EA+++++ +S GL D +++ LI + D + A+ LF+ + E
Sbjct: 508 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 567
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
++ T++ + DE++ ++ + +I CK ++ A
Sbjct: 568 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH-RADSYTYRVLIDGSCKTANVDRAY 626
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
L MI F P+ T+ +IN + F + + H
Sbjct: 627 MHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 665
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 9/243 (3%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G + A + D+M L + L A CK EA L+ + G+ +++ Y
Sbjct: 166 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTY 225
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ I + A L MR + D+ +Y T++ GL + P+ +L ++
Sbjct: 226 NIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVV-TYNTLIRGLCKKSMPQEAMHYLRRMMN 284
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
+ +N+II +CK +++A L+ +F F P+ TY SLING
Sbjct: 285 QGCLP-DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 343
Query: 562 SVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
L +++E + KGIK + + ++ + L G +QV+ + E D
Sbjct: 344 RALELFNEAQ-------AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDI 396
Query: 622 WKY 624
Y
Sbjct: 397 QTY 399
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 94/241 (39%), Gaps = 27/241 (11%)
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+ +A L M GC Y + YCK EAT+L+ D G D Y
Sbjct: 271 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 330
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN----HRPELMAAFLDE 498
+LI D + A LF + + I Y +++ GL H ++M +E
Sbjct: 331 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 390
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
P ++ +N +I+ CK G + DA + I + P+ T+ +LI+GY
Sbjct: 391 GCH-PDIQT----YNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL 445
Query: 559 QYFSVLM----MWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+ S L MW + GI + ++ L L K G V +V E QE
Sbjct: 446 KLDSALQLVERMW-----------EYGIAPDTITYNSVLNGLCKAG---KVNEVNETFQE 491
Query: 615 M 615
M
Sbjct: 492 M 492
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
I+ A V+ D+AH + M A G S L + L+++C R A +L+ +
Sbjct: 91 AIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR 150
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G Y ++ A LF M ++ ++ ++ L + R +++
Sbjct: 151 G----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCK--RGDVL 204
Query: 493 AA--FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
A L +V++ + + +N I C+AGRL +A R + M P+ TY +L
Sbjct: 205 EAGLLLGKVIQR-GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTL 262
Query: 551 ING 553
I G
Sbjct: 263 IRG 265
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 158/364 (43%), Gaps = 61/364 (16%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE--KI 275
PN++ N ++G C +++A ++++ + G+ P+ ++ L + GL + K+
Sbjct: 249 PNLFTVNIFIQGFCQ-RAMLNEAIRLLDGVG-RGLTPDVITYNTL-----ICGLCKNFKV 301
Query: 276 VE----LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
VE L ++NE G+ Y+S+I GY KLG +++A + L G + +
Sbjct: 302 VEAEHYLRKMVNE-GYEPDGFTYNSIIDGYCKLGMMQNADQI----LRDGAFKGFVPDES 356
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
TYC ++ G Q+G++ N+ EA + L+P+ ++ + ++ GL +A
Sbjct: 357 TYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNT-----LVKGLSQQGLILQALK 411
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+++EM+ GCS + Y + CK ++A LV+D + G DV ++ LI+
Sbjct: 412 LMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYC 471
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
+A + M + P+++
Sbjct: 472 KKLKLDNAIEIVDRMWNHGV------------------SPDVIT---------------- 497
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+NSI++ CKAG+ ED T + M+ PN TY L + A + L + E
Sbjct: 498 --YNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEE 555
Query: 570 IKRK 573
++ K
Sbjct: 556 MQNK 559
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 9/239 (3%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+AH + +EM G + + + C++ E+ +L+ + G+ ++ + I
Sbjct: 199 EAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFI 258
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ A L + D+ +Y T++ GL +N + +L ++V +
Sbjct: 259 QGFCQRAMLNEAIRLLDGVGRGLTPDVI-TYNTLICGLCKNFKVVEAEHYLRKMVNEG-Y 316
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
E +NSII +CK G +++A + LR F F P++ TY SLING +
Sbjct: 317 EPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAIN 376
Query: 566 MWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+++E +KG+K L + + L + G ++++ + E D W Y
Sbjct: 377 VFNEAM-------EKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTY 428
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 144/341 (42%), Gaps = 14/341 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+ + N+ ++G C L + +A++++ + G P+ES++ L G ++ +
Sbjct: 317 EPDGFTYNSIIDGYC-KLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAI 375
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
+ + E G +V ++L+ G + G + A + + M ++ S + TY
Sbjct: 376 NVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLM------NEMSENGCSPDIWTYN 429
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA-CVNLGLSDKAHSILDE 393
V+ G + G V NL+I+A G + D +I C L L D A I+D
Sbjct: 430 LVINGLCKIGCVSDADNLVIDAI---AKGHLPDVFTFNTLIDGYCKKLKL-DNAIEIVDR 485
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G S + Y L CK + + + G ++ Y+ L E+ ++
Sbjct: 486 MWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARK 545
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A +L +M+ + ++ T+M G +N + V E + +N
Sbjct: 546 VEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYN 605
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+I+AF + A++ +M F P+ TY +I+G+
Sbjct: 606 IMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGF 646
>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
Length = 820
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 156/361 (43%), Gaps = 41/361 (11%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNES 257
+VFEE L N++ P+I N G C GL V + +++ M+ G+ PN
Sbjct: 455 QVFEE----MLKANIE---PDIVTYNILASGFCKSGL--VMEVFDLLDRMADQGLEPNSL 505
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
++G + G + L +++ E G V YSS++ GY+ G + A +
Sbjct: 506 TYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRV 565
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGII 375
GN+ FS +++ + GNV+G +N+ I+ + P I + +I
Sbjct: 566 ARQGNLVDH-FSCS---KLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSK-----LI 616
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
S G DKAH +M G SV + VY + YCK R EA QL + +++ G++
Sbjct: 617 SIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIK 676
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
DV Y L++ + Q + ++ R S+L L NH L +
Sbjct: 677 PDVIAYTVLLDGHLKETLQQGWEGIAKERR---------SFL-----LRANHNKLLSS-- 720
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++D ++E + +I CKA L +A+ M+ P+ Y +LINGY
Sbjct: 721 ----MKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYC 776
Query: 556 T 556
+
Sbjct: 777 S 777
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 154/378 (40%), Gaps = 23/378 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEK 274
+ P++Y A + + + V +A +V M+ +GV+P+ + FL L
Sbjct: 220 LTPDVYT-FAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLA 278
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
V L+ + N + + Y+ ++ G K L+ A + L + S+ Y
Sbjct: 279 YVILQEI-NREKVPVEAMAYNMVMDGLCKEMRLDEAEKL----LENKARQGSNPDVYGYS 333
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+++ + + GN L N + + + GI + + ++ LG++ +A + +
Sbjct: 334 YLIRSYCKMGN---LINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKF 390
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + +Y + YCK EA +L+ ++ GL D +Y LI +
Sbjct: 391 KDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEM 450
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
Q+A +F +M +A I +Y + +G ++ + LD + D +E + +
Sbjct: 451 QNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMA-DQGLEPNSLTYGI 509
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
I FC+ G L +A+ + + + Y S++ GY+ + M++ + R
Sbjct: 510 AIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVAR-- 567
Query: 575 STDGQKGIKFEHNLVDAF 592
+ NLVD F
Sbjct: 568 ----------QGNLVDHF 575
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 129/292 (44%), Gaps = 12/292 (4%)
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
Y G + V+L + M G + + Y+ LISGY G +++A + L N+E
Sbjct: 409 YCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKA-NIEP 467
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
TY + GF ++G V + +L+ + Q LEP+ + + G I+ C L
Sbjct: 468 DIV---TYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSL----TYGIAIVGFCRGGNL 520
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
S+ A + + + G +Y + Y T A L + ++ G +D +
Sbjct: 521 SE-AEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSK 579
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI + Q A ++ + M E + SY +++ +N + + ++V+
Sbjct: 580 LINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRG 639
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+ V + +++ +CKAGRL++A + +M L +P+ Y L++G++
Sbjct: 640 -LSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHL 690
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 22/250 (8%)
Query: 221 YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
++C+ + C + +V A V + M V P+ S+ L +Y G +K
Sbjct: 575 FSCSKLINDLCR-VGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFH 633
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL---------------LCLGGGNMEQ 325
M + G S ++ Y+ L++GY K G L+ A + + + L G E
Sbjct: 634 DMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKET 693
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
E + + FL N L + + + Q +EP D +I
Sbjct: 694 LQQGWEGIAKERRSFLLRANHNKLLSSMKDMQ-IEP-----DVPCYTVLIDGKCKAEYLV 747
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A + DEM G + Y + YC + ++A L+ ++ G++ D + L
Sbjct: 748 EARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLN 807
Query: 446 EASITSQDFQ 455
++S+ S+ Q
Sbjct: 808 QSSLRSRKIQ 817
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 152/351 (43%), Gaps = 23/351 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ A + + G C S DA ++ M+ G P+ ++ + +G+ E+
Sbjct: 41 VTPSTVAYTSLIHGLCMA-NSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEA 99
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+L M E G +V Y++++ G K G +E A LL ++ ++
Sbjct: 100 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEA----LLLFNEMERLGCTPNRRSHNT 155
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGI-ISACVNLGLSDKAHSILD 392
++ G Q + + +EA+ + P S +GI I G ++A+ +
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEARDIPPD------SWSYGILIDGLAKAGKLNEAYKLFR 209
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M G + Y + C + EA +L + S G + ++ LI+A
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG 269
Query: 453 DFQSAFSLFRDMRE-ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVK 508
AF L + M + + D+ +Y T+++GL R + L+++V+ P V +
Sbjct: 270 KMDEAFRLLKRMTDDGHVPDVV-TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQ 328
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
N++IH CKAGR+++A+ L M+ P+ TY +L++G+ A Q
Sbjct: 329 ----NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 169/402 (42%), Gaps = 25/402 (6%)
Query: 175 MPFELWG-GFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG 233
+P + W G L+D K K+F R LD + P+ N + G C
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLF----RRMLDSGI---TPSAVTYNVVIHGMCLA 233
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
++ +A ++ ++M G RP+ +F L + +G ++ L M + G +V
Sbjct: 234 Y-TLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVT 292
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
YS+LISG + ++ A R +L + + + ++ T ++ G + G +K A +
Sbjct: 293 YSTLISGLCSIARVDDA-RHLLEDMVKRQCKPTVVTQNT---LIHGLCKAGRIKE-AREV 347
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
++A + SG D ++ G +++A +L +M A G + + Y +
Sbjct: 348 LDA--MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK +R EA + + SSG ++ Y ALI ++ LF +M A I
Sbjct: 406 CKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDH 465
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFC-----KAGRLEDA 528
Y T+ L ++ R +A E++ + R +++ W ++ F AG++E A
Sbjct: 466 VVYGTLAAELCKSGR----SARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMA 521
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+R M+ P + SL+ G + Q + EI
Sbjct: 522 LGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 130/311 (41%), Gaps = 20/311 (6%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
V P+ S+G L A G +L + G + V Y+SLI G + + A
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA- 64
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
R + + N S TY ++ + G ++ +LI +K+ G V D
Sbjct: 65 RELFADM---NRRGCPPSPVTYNVIIDASCKRGMLEEACDLI---KKMIEDGHVPDVVTY 118
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
++ G ++A + +EM GC+ + + C++ + +A Q+ ++ +
Sbjct: 119 NTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEA 178
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
+ D +Y LI+ + A+ LFR M ++ I +Y ++ G+
Sbjct: 179 RDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGM-------C 231
Query: 492 MAAFLDEVVE------DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+A LDE +E +N +I A CK G++++A R L+RM P+
Sbjct: 232 LAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVV 291
Query: 546 TYLSLINGYVT 556
TY +LI+G +
Sbjct: 292 TYSTLISGLCS 302
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 106/261 (40%), Gaps = 9/261 (3%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+Y ++ G + G + +L QKL SG+ +I D A +
Sbjct: 12 SYGILIDGLAKAGKLNDARDLF---QKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+MN GC Y + A CK EA L+ + G DV Y+ +++ S
Sbjct: 69 ADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ A LF +M + S+ TI+ GL + + + E +E + +
Sbjct: 129 GRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHE-MEARDIPPDSWS 187
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+ +I KAG+L +A + RRM+ P+ TY +I+G A L ++ ++
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 572 RKISTDGQKGIKFEHN-LVDA 591
K G + +F N L+DA
Sbjct: 248 SK----GCRPSRFTFNILIDA 264
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 139/353 (39%), Gaps = 41/353 (11%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+A+ V++ M +G+ PN S+ + G+ L LM G V Y++L+
Sbjct: 253 EAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLL 312
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY-CEVV-KGFLQNGNVKGLANLIIEA 356
GY G + A+ + M + S Y C ++ + G + L+
Sbjct: 313 HGYCHTGKVSEANNVLR------EMMRDGCSPNNYTCNILLYSLWKEGRISEAEELL--- 363
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG------------------ 398
QK+ G V+D +I N G DKA I++ M G
Sbjct: 364 QKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDS 423
Query: 399 -----CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
C L Y + CK R EA + +++ LQ D YD I +
Sbjct: 424 DSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGK 483
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTH 510
SAF + +DM + +Y +++ GL ++ + +DE+ E P V +
Sbjct: 484 ISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSI--- 540
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+N+++ + C+ GR++DA L M+ PN ++ LI + A + +V
Sbjct: 541 -YNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAV 592
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 118/289 (40%), Gaps = 48/289 (16%)
Query: 372 FGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
FGI + G + K +L EM G S VY + ++CKE +T +A +LV ++
Sbjct: 94 FGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMR 153
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT--------- 481
GL DV ++A I A +S A +FRDM+ + L +
Sbjct: 154 KDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKE 213
Query: 482 GLMENHRP----------------------------ELMAA--FLDEVVEDPRVEVKTHD 511
G++E R +L+ A L E+V D +E +
Sbjct: 214 GMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMV-DMGMEPNVYS 272
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N ++ CK G L DA+ +R M P+ TY +L++GY + + +
Sbjct: 273 YNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEA----NNVL 328
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
R++ DG + N++ LY+L K G ++++K E +D
Sbjct: 329 REMMRDGCSPNNYTCNIL---LYSLWKEGRISEAEELLQKMNEKGYVID 374
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 158/429 (36%), Gaps = 95/429 (22%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ DA ++ + M G PNE SFG L Y G K +EL M GFS V Y++
Sbjct: 72 LDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNT 131
Query: 297 LISGYVKLGNLESA--------------------SRTILLCLGGGNMEQSDFSKE----- 331
LIS + K G + A +R LC G +E S ++
Sbjct: 132 LISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDE 191
Query: 332 ----------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
TY ++ GF + G ++ L +K++ S +++R + V +
Sbjct: 192 VLGLPQPNIITYNLMLGGFCKEGMLEEARALF---EKMKVSENLMNRESYNIWLLGLVRI 248
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G +A +L EM G + Y + CK +A L+ ++SSG+ D Y
Sbjct: 249 GKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTY 308
Query: 442 DALIEASITSQDFQSAFSLFRDM--------------------REARIYDL--------- 472
L+ + A ++ R+M +E RI +
Sbjct: 309 TTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNE 368
Query: 473 KGSYLTIMT------GLMENHRPELMAAFLD------------------EVVEDPRVEVK 508
KG + +T GL N + + ++ +V+D K
Sbjct: 369 KGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKK 428
Query: 509 TH----DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+++II CKAGR+ +AK+ M+ +P+ Y I+ + + S
Sbjct: 429 CMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAF 488
Query: 565 MMWHEIKRK 573
+ ++++K
Sbjct: 489 RVLKDMEKK 497
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 171/474 (36%), Gaps = 64/474 (13%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQ 143
TD+A K + + L P N+ I+ L S R F + +
Sbjct: 142 TDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNII 201
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T + +LG A AL + M + M E + +L+ + R K+ E
Sbjct: 202 TYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVR-------IGKLLEA 254
Query: 204 CCRIALDENLDF-MKPNIYACNAALEGCC------------------------------- 231
++ L E +D M+PN+Y+ N ++G C
Sbjct: 255 --QLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLL 312
Query: 232 YG---LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFS 288
+G VS+A V+ M G PN + L Y +G + EL MNE G+
Sbjct: 313 HGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYV 372
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKG 348
V + +I G G L+ A + T+ G L N + G
Sbjct: 373 IDTVTCNIVIDGLCNNGKLDKAIEIV-------------NGMWTHGSAALGNLGNSYI-G 418
Query: 349 LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
L + +K P I IIS G +A EM +Y
Sbjct: 419 LVDDSDSRKKCMPDLISYST-----IISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDV 473
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ ++CKE + + A +++ D+ G + Y++LI + + L +MRE
Sbjct: 474 FIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERG 533
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKA 522
+ Y +++ L E R + + LDE+++ + ++ +I AFCKA
Sbjct: 534 VSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKG-ISPNISSFSILIKAFCKA 586
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 148/351 (42%), Gaps = 47/351 (13%)
Query: 206 RIALDENLD-FMKPNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
R LDE ++ + P++ NA ++G C G+ V A+++++ M PNE ++ L
Sbjct: 129 RRILDEMVEKGLVPSVPTYNALIDGYCKEGM--VEAAQEILDLMHSNSCNPNERTYNELI 186
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+ K + + L S M E + +V Y+SLI G K+G L+SA R LL L N
Sbjct: 187 CGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYR--LLNLMNENG 244
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
D + TY + + G ++ AN++ + L+ GI + + +I G
Sbjct: 245 VVPD--QWTYSVFIDTLCKKGRIEE-ANVLFNS--LKEKGIKANEVIYTALIDGYCKAGK 299
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
D A+S+LD M C Y + CKE + EA L+ + GL+ V Y
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI A + DF A + M + ++P++
Sbjct: 360 LIVAMLKEGDFDYAHRILDQMVSS------------------GYQPDV------------ 389
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ + + IHAFC G +++A+ + M P+ TY +I+ Y
Sbjct: 390 ------YIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAY 434
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 145/366 (39%), Gaps = 48/366 (13%)
Query: 280 SLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVV 337
++M + G V Y++LI G ++G ++ M + D + TY +V
Sbjct: 28 NMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIF------KKMREDDCYPTVRTYTVIV 81
Query: 338 KGFLQNGNVKGLANLIIEAQ----------------------KLEPSGIVVDRSVGFGII 375
++G NL E + KLE ++D V G++
Sbjct: 82 HALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLV 141
Query: 376 SACVNL----------GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+ G+ + A ILD M++ C+ Y + +C++ A L
Sbjct: 142 PSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMAL 201
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ + S L V Y++LI SA+ L M E + + +Y + L +
Sbjct: 202 LSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCK 261
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
R E A L +++ ++ + ++I +CKAG+++DA L RM+ PN
Sbjct: 262 KGRIE-EANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSS 320
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAV 605
TY +LI+G + L++ + QKG+K + A++K G FD
Sbjct: 321 TYNALIDGLCKERKVQEALLLMESMI-------QKGLKCTVPTYTILIVAMLKEGDFDYA 373
Query: 606 MQVVEK 611
+++++
Sbjct: 374 HRILDQ 379
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 131/328 (39%), Gaps = 32/328 (9%)
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFS-------------KETYCEVVKGFLQN 343
+++GY KLGNL A+ N S FS + +Y ++ G +
Sbjct: 1 MVNGYCKLGNLVEANLN--------NDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEV 52
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
G V N+ + ++ + V +V I+ A G +A ++ EM GC +
Sbjct: 53 GRVDEGINIFKKMREDDCYPTVRTYTV---IVHALFESGRRMEAINLFSEMRERGCEPNI 109
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y + A CKE + E +++ ++ GL V Y+ALI+ ++A +
Sbjct: 110 HTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDL 169
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M + +Y ++ G A L +++E R+ +NS+IH CK G
Sbjct: 170 MHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLES-RLTPSVVTYNSLIHGQCKIG 228
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIK 583
L+ A R L M P+ TY I+ + ++++ +K +KGIK
Sbjct: 229 YLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLK-------EKGIK 281
Query: 584 FEHNLVDAFLYALVKGGFFDAVMQVVEK 611
+ A + K G D ++++
Sbjct: 282 ANEVIYTALIDGYCKAGKMDDANSLLDR 309
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 97/242 (40%), Gaps = 12/242 (4%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
+ A S+ + M GC Y + C+ R E + + V Y +
Sbjct: 21 NSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVI 80
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
+ A S A +LF +MRE +Y ++ + + + E LDE+VE
Sbjct: 81 VHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGL 140
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
V +N++I +CK G +E A+ L M PN++TY LI G+ + +
Sbjct: 141 VP-SVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAM 199
Query: 565 MMWHEIKRKISTDGQKGIKFEHNLV--DAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKW 622
+ ++ + ++V ++ ++ K G+ D+ +++ E V D+W
Sbjct: 200 ALLSKMLES---------RLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQW 250
Query: 623 KY 624
Y
Sbjct: 251 TY 252
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 115/318 (36%), Gaps = 22/318 (6%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A ++++ M G +P+ + + + +G ++ ++ S+M E G + Y+ +I
Sbjct: 373 AHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVID 432
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
Y LG L A + G D S TY ++K L+ K N+ +
Sbjct: 433 AYGGLGLLNPAFDVLKRMFDTG----CDPSHHTYSCLIKHLLKEELTKKYKNVALCDSI- 487
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
+V F ++ + + A + ++M GCS + Y + CK R
Sbjct: 488 --------PNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRL 539
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A +L ++ G+ Y++L+ + A L M E L S +
Sbjct: 540 GVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVL 599
Query: 480 MTGLMENHRPELMAAFLDEVVE----DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
GL E E +++ D V W +I K G + L M
Sbjct: 600 FCGLYEEGSKEKAKVVFSNLLQCGYNDDEVA-----WKILIDGLLKNGLSDGCSELLGVM 654
Query: 536 IFLQFEPNDQTYLSLING 553
+ + QTY LI G
Sbjct: 655 EARGCQIHPQTYRMLIEG 672
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 167/407 (41%), Gaps = 54/407 (13%)
Query: 169 FKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIA--------LDENLDF-MKPN 219
F +R ++ WG N +AF F+ I LD+ L + +
Sbjct: 175 FTHRLIYTYKYWG----------PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVT 224
Query: 220 IYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELE 279
+ +CNA L + + E I+ G+ N +S+ + Y G K+ E
Sbjct: 225 VDSCNAFLSRIANNSEGI---EMAIKVFCEYGISWNTTSYNIIIYSLCRLG---KVKEAH 278
Query: 280 SLMNEFGFSS---QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY--- 333
L+ + F S +V YS++I GY LG L+ A + + +M+ Y
Sbjct: 279 RLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM------DDMQIKGLKPNRYTYN 332
Query: 334 ------CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
C++ K F ++ + +QK+ P +V +I LG A
Sbjct: 333 SIILLLCKIGKSFEAEKVLREMM-----SQKIIPDNVVYT-----TLIHGFFKLGHVRTA 382
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ DEM + S Y ++ + + + E L ++ S GL+ D Y LI+
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ + +AFSL +M + + +Y ++ GL ++ + LDE + +++
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE-MRKKGLQL 501
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+NS+++ CKAG +E A + ++ M +P+ TY ++I+ Y
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 168/414 (40%), Gaps = 58/414 (14%)
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
+E R+ + + P++ + + ++G C+ L + A K+++ M + G++PN ++
Sbjct: 275 KEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH-LGELKKALKLMDDMQIKGLKPNRYTYNS 333
Query: 262 LAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ L G K E E ++ E V Y++LI G+ KLG++ +A++
Sbjct: 334 IILLLCKIG---KSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWF---- 386
Query: 319 GGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSV---- 370
M S + TY +++GF Q G V NL E ++ L+P + +
Sbjct: 387 --DEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444
Query: 371 -------GFGIISACVNLGLS-------------------DKAHSILDEMNACGCSVGLG 404
F + + V +G++ D A+ +LDEM G + +
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
+Y + CK +A +L+ ++ +G+ D Y +I+A D A L ++M
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564
Query: 465 REARIYDLKGSYLTIMTGL----MENHRPELMAAFLDE-VVEDPRVEVKTHDWNSIIHAF 519
+ + ++ +M G M L+ L++ +V D +N+++
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAIT------YNTLMKQH 618
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
C + + +RM P+ TY LI G+ A ++ E+ K
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 113/301 (37%), Gaps = 69/301 (22%)
Query: 234 LQSVSDAEKVIETMSVL------GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGF 287
+Q KVIE ++ G++P+E ++ L +Y G L + M + G
Sbjct: 405 IQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464
Query: 288 SSQMVFYSSLISGYVKLGNLESASR----------TILLCL---------GGGNMEQS-- 326
+ +V Y +LI G K G L++A+ + +C+ GN+EQ+
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524
Query: 327 ----------DFSKETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVV-------- 366
D TY V+ + + G++ L+ E + L+P+ +
Sbjct: 525 LMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC 584
Query: 367 --------DRSVGF----GIISACVNLGLSDKAHSILDEMNAC----------GCSVGLG 404
DR +G+ GI+ + K H I + MN G +
Sbjct: 585 MLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSN 644
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y +K +CK EA L ++ G V +Y+ALI+ + A LF +M
Sbjct: 645 TYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEM 704
Query: 465 R 465
R
Sbjct: 705 R 705
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
T +N II++ C+ G++++A R L +M F P+ +Y ++I+GY + L +
Sbjct: 258 TTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMD 317
Query: 569 EIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAF 628
+++ K G K ++ +N + L + G F+A +V+ + K+ D Y
Sbjct: 318 DMQIK----GLKPNRYTYNSIILLLCKI--GKSFEA-EKVLREMMSQKIIPDNVVYTTLI 370
Query: 629 MENHKKLKVAKLRKRN 644
H K+ +R N
Sbjct: 371 ---HGFFKLGHVRTAN 383
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 144/357 (40%), Gaps = 34/357 (9%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PN+ L+G C +A ++ E M G++P+E ++ L G E
Sbjct: 526 DGIIPNVITYTTLLQGQC-DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAE 584
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
E S + G + V+Y++LI G+ K GN + A+ I + G S TY
Sbjct: 585 ---EAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS----YTY 637
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ + K L + ++ GI +I + G D A + +E
Sbjct: 638 SVLLHALCKQ---KRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + G Y + +YCKE R +A L++ + G+ DV Y+ LI+
Sbjct: 695 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 754
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP----------------ELMAAFLD 497
AFS + M A +Y ++ L++ + ++ L+
Sbjct: 755 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLE 814
Query: 498 EVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+V+ +P V ++S+I FCKAGRLE+A L M PN+ Y LI
Sbjct: 815 RMVKHGLNPTVTT----YSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 159/385 (41%), Gaps = 34/385 (8%)
Query: 218 PNIYACNAALEGCCYG-LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-QEKI 275
P++ NA + G Y L ++DA K+ E M G P++ ++ L Y GL +K
Sbjct: 321 PSVMTYNAMIVG--YSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY-----GLCDQKT 373
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK-- 330
E E L+N GF+ +V +++LI+GY + A R N S K
Sbjct: 374 EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRM-------KNKMMSSKCKLD 426
Query: 331 -ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
+ + +++ ++ +K L+ E + +G+V + II G D A
Sbjct: 427 LQVFGKLINSLIKKDRLKEAKELLNE---ISANGLVPNVITYTSIIDGYCKSGKVDIALE 483
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+L M GC Y + K+ + +A L+ + G+ +V Y L++
Sbjct: 484 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 543
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
DF +AF LF M + + + +Y + L + R E +F +V K
Sbjct: 544 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKV 600
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+ + ++I F KAG + A + RMI P+ TY L++ ++ L
Sbjct: 601 Y-YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEAL----P 655
Query: 570 IKRKISTDGQKGIKFEHN-LVDAFL 593
I ++S G K F + L+D L
Sbjct: 656 ILDQMSLRGIKCTIFAYTILIDEML 680
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 131/338 (38%), Gaps = 51/338 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ + ++G C V A +V++ M G +PN ++ L Y K +
Sbjct: 460 PNVITYTSIIDGYCKS-GKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMA 518
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCE 335
L + M + G ++ Y++L+ G + ++A R + MEQ+ + Y
Sbjct: 519 LLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEM------MEQNGLKPDEHAYAV 572
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ + G + + I+ G+ + + +I G +D A ++++ M
Sbjct: 573 LTDALCKAGRAEEAYSFIVR------KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMI 626
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC+ Y L A CK+ R EA ++ +S G++ + Y LI+ +
Sbjct: 627 DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHD 686
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A ++ +M + H+P +
Sbjct: 687 HAKRMYNEMTSS------------------GHKPSATT------------------YTVF 710
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
I+++CK GRLEDA+ + +M P+ TY LI+G
Sbjct: 711 INSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 156/374 (41%), Gaps = 35/374 (9%)
Query: 263 AYLYALKGL-----QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
Y +AL+ L E + + S + + G V Y+++I Y K G+L +A R L
Sbjct: 150 CYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLL 209
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL-----IIEAQKLEPSGIVVDRSVGF 372
L GG +E F+ +V G+ + G ++ L ++ Q+ E S ++ +
Sbjct: 210 LEGG-LEPETFTCNA---LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQ---- 261
Query: 373 GIISA-CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
G+ A CV +A + M GCS + + + CK R +A L +
Sbjct: 262 GLCEAKCVR-----EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ 316
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
+G+ V Y+A+I A + M + + +Y T++ GL + E
Sbjct: 317 NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEA 376
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+ V E V T + ++I+ +C A + +DA R +M+ + + + Q + LI
Sbjct: 377 EELLNNAVKEGFTPTVVT--FTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 434
Query: 552 NGYVTAEQYFSVLMMWHEIKRKISTDG-QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
N + ++ L E+ +IS +G + +++D + K G D ++V++
Sbjct: 435 NSLIKKDR----LKEAKELLNEISANGLVPNVITYTSIIDGY----CKSGKVDIALEVLK 486
Query: 611 KSQEMKVFVDKWKY 624
+ + W Y
Sbjct: 487 MMERDGCQPNAWTY 500
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 156/398 (39%), Gaps = 57/398 (14%)
Query: 182 GFLVDICRKNSNFVAFLK-----VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQS 236
G L D N+ ++ K C R+ L+ L+ P + CNA + G C
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLE---PETFTCNALVLGYCR-TGE 233
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAY-LYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+ A + M ++G + NE S+ L L K ++E +V L +M G S + ++
Sbjct: 234 LRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALV-LFLMMKRDGCSPNVRAFT 292
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
LISG K G + G A L+ +
Sbjct: 293 FLISGLCKSGRV----------------------------------------GDARLLFD 312
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
A + +G+V +I LG + A I + M GC Y + C
Sbjct: 313 A--MPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC- 369
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI-YDLKG 474
+ +T EA +L+ + G V + LI ++ F A + M ++ DL+
Sbjct: 370 DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQ- 428
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+ ++ L++ R + L+E+ + V + SII +CK+G+++ A L+
Sbjct: 429 VFGKLINSLIKKDRLKEAKELLNEISANGLVP-NVITYTSIIDGYCKSGKVDIALEVLKM 487
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
M +PN TY SL+ G V ++ + + ++++
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 525
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A+++ M+ G +P+ +++ Y +G E +L M G + +V Y+ LI
Sbjct: 688 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 747
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNG-------NVKGLANL 352
G +G ++ A T+ +G + + TYC ++K L+ + G+ NL
Sbjct: 748 GCGHMGYIDRAFSTLKRMVGA----SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNL 803
Query: 353 IIEAQKLEPSGIVVDRSVGFGI----------ISACVNLGLSDKAHSILDEMNACGCSVG 402
I +L+ + +++R V G+ I+ G ++A +LD M G S
Sbjct: 804 I----ELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPN 859
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+Y +K C +A V +S G Q + +Y L+ DF+ SLF
Sbjct: 860 EDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFC 919
Query: 463 DMRE 466
D+ E
Sbjct: 920 DLLE 923
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 150/374 (40%), Gaps = 57/374 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ Y N L G C G + DAE ++ M PNE +F + GL ++
Sbjct: 208 VAPDTYTYNTVLMGLC-GARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRA 266
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLGGGNMEQSDFSKETY 333
V+L M ++G + +V YS+L++G+ + G ++ A + +LC T
Sbjct: 267 VQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGMLC-----------KPNTI 315
Query: 334 C--EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV-NLGLSDKAHSI 390
C +KG + + LI+E + + + F ++++C+ GL D A +
Sbjct: 316 CYNAALKGLCIAQRWEDVGQLIVEMVRKD----CLPNEATFSMLTSCLCQNGLVDCAMEV 371
Query: 391 LDEMNACGCSVGLGVY----------------------VP----------TLKAYCKEHR 418
L++M+ GC +Y +P LK C+ R
Sbjct: 372 LEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCSPDVISFNAALKGLCRAER 431
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
+A +L++ + L ++ LI++ + +A +F M + +Y +
Sbjct: 432 WDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSS 491
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ GL E E + P + +N+++ C+A R EDA + M
Sbjct: 492 LINGLSEQGLVESAIELFQSMPCKPDI----FGYNAVLKGLCRAARWEDAGELISNMARK 547
Query: 539 QFEPNDQTYLSLIN 552
PN+ T+ LIN
Sbjct: 548 DCPPNEITFNILIN 561
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 156/380 (41%), Gaps = 30/380 (7%)
Query: 215 FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
KPN NAAL+G C Q D ++I M PNE++F L GL +
Sbjct: 309 LCKPNTICYNAALKGLCIA-QRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDC 367
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+E+ M+++G V Y++LI + + G ++ A + + N ++
Sbjct: 368 AMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLL-------NSMPCSPDVISFN 420
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+KG + LI+ Q L +++ + I S C N G + A + ++M
Sbjct: 421 AALKGLCRAERWDDAEELIV--QMLREDCPLIEMTFNILIDSLCQN-GRVNNAIEVFEQM 477
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
GC+ + Y + ++ A +L S + D+ Y+A+++ + +
Sbjct: 478 PKYGCTPDIVTYSSLINGLSEQGLVESAIEL---FQSMPCKPDIFGYNAVLKGLCRAARW 534
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD---EVVEDPRVEVKTHD 511
+ A L +M + ++ ++ L + +D EV E T D
Sbjct: 535 EDAGELISNMARKDCPPNEITFNILINSLCQK-------GLVDRAIEVFEQMPKYGSTPD 587
Query: 512 ---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+N++I+ F + GRL+DA+R L M +P+ +Y S + G AE++ +
Sbjct: 588 IFTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVA 644
Query: 569 EIKRKISTDGQKGIKFEHNL 588
E+ R + K+ + L
Sbjct: 645 EMLRMKCPPNEVTFKYANRL 664
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 159/397 (40%), Gaps = 26/397 (6%)
Query: 175 MPFELWGGFLVDICRKNS-NFVAFLKVFEECCRIALDENLDFMK--------PNIYACNA 225
+ FE++ + D C NS + A + C L+E +D ++ P ++A
Sbjct: 255 LAFEMFDRMVKDGCDPNSVTYSALINGL--CSEGRLEEAMDMLEEMIDKGIEPTVHAYTI 312
Query: 226 ALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF 285
+ C +S +A K++ M G PN ++ L + G E + + M
Sbjct: 313 PIVSLCDAGRSC-EAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD 371
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
G V YS+LI+ G E+A L ++ + ETY ++KGF G
Sbjct: 372 GLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNT----ETYNVIIKGFCSIGY 427
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
++ + + K PS V+ ++ II G + A +L+ M G +
Sbjct: 428 IQKATAIFDQMLKAGPSPNVITYNI---IIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWT 484
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + + + + A L ++ G+ +V Y+A+I +T A +LF M
Sbjct: 485 YANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMV 544
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKA 522
E+ G+Y +++G + +R F ++V+ P V T S I CK
Sbjct: 545 ESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYT----SFIDGLCKN 600
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
GR A + M + PN TY SLI+G Q
Sbjct: 601 GRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQ 637
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 142/337 (42%), Gaps = 25/337 (7%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNE---FGFSSQMVFYSSLISGYVKLGNL 307
G+RPN +F + + KG K+ E E +M +G Y+SLI G+ K GNL
Sbjct: 197 GIRPNLFTFNAMIKILCNKG---KVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNL 253
Query: 308 ESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIV 365
+ A + G D + TY ++ G G ++ +++ E + +EP+
Sbjct: 254 DLAFEMFDRMVKDG----CDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPT--- 306
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+ I+S C + G S +A +L +M GC + Y + ++ + A +
Sbjct: 307 -VHAYTIPIVSLC-DAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGV 364
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ + GL Y ALI F++A ++F M +Y I+ G
Sbjct: 365 YHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCS 424
Query: 486 NHRPELMAAFLDEVVE-DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
+ A D++++ P V T +N IIH + K G + +A R L M + +
Sbjct: 425 IGYIQKATAIFDQMLKAGPSPNVIT--YNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDT 482
Query: 545 QTYLSLINGYVTA---EQYFSVL--MMWHEIKRKIST 576
TY +LI+G+ E FS+ M+ H I + T
Sbjct: 483 WTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVT 519
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 103/259 (39%), Gaps = 38/259 (14%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+++A +++E M G++ + ++ L ++ G E L + M E G S +V Y++
Sbjct: 463 MNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNA 522
Query: 297 LISGYVKLGNLESASRTILLCLGGGN--------MEQSDFSKE----------------- 331
+I+GY+ + ++ A + GN M S FSK
Sbjct: 523 IINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQG 582
Query: 332 ------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
TY + G +NG + E +K + + S +I G ++
Sbjct: 583 LLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYS---SLIDGLCQEGQAE 639
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
A +LD+ GC + Y ++ C + R EA QLV + GLQ Y AL+
Sbjct: 640 DAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALL 695
Query: 446 EASITSQDFQSAFSLFRDM 464
+ + +SA +F M
Sbjct: 696 VGQCKNLEVESALKIFDSM 714
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 110/286 (38%), Gaps = 22/286 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ NA + G + V DA + M G P+ ++ + ++ +I
Sbjct: 513 ISPNVVTYNAIINGY-LTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSK---TNRI 568
Query: 276 VELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
E E+ M + G ++ Y+S I G K G A + M++ D+
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIF------HEMKKRDYFPNL 622
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY ++ G Q G + +A++L G + ++ G +A +
Sbjct: 623 CTYSSLIDGLCQEGQAE-------DAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQL 675
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
++ M G +Y L CK A ++ + ++G Q + +Y ALI A
Sbjct: 676 VESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCK 735
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
+ Q A +F+ M + + + ++ GL++ +L L
Sbjct: 736 ANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELL 781
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 156/375 (41%), Gaps = 52/375 (13%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVL---GVRPNESSFGFLAYLYALKGLQEKI 275
N+Y N + C EKV +S + GV P+ ++ L Y+ +GL E+
Sbjct: 224 NVYTLNIMVNALCKD----GKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEA 279
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS------------------RTILL- 316
EL M GFS + Y+++I+G K G E A R++L+
Sbjct: 280 FELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 339
Query: 317 -CLGG---------GNMEQSDFSKETYC--EVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
C G +M D + C ++ F ++GN L ++ ++ +G+
Sbjct: 340 ACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGN---LDKALMYFNSVKEAGL 396
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ D + +I G+ +A ++ +EM GC++ + Y L CK EA +
Sbjct: 397 IPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 456
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L +++ GL D LI+ + Q+A LF+ M+E RI +Y T++ G
Sbjct: 457 LFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFG 516
Query: 485 E----NHRPELMAAFLD-EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ + E+ A + E++ P ++ +++A C G L +A R MI
Sbjct: 517 KVGDIDTAKEIWADMVSKEILPTP------ISFSILVNALCSKGHLSEAFRVWDEMISKS 570
Query: 540 FEPNDQTYLSLINGY 554
+P S+I GY
Sbjct: 571 IKPTVMICNSMIKGY 585
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 148/363 (40%), Gaps = 80/363 (22%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ N L G C + + +A+K+ M+ G+ P+ + L + G + +EL
Sbjct: 434 DVVTYNTILHGLC-KRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMEL 492
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M E +V Y++L+ G+ K+G++++A KE + ++V
Sbjct: 493 FKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTA-------------------KEIWADMV- 532
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNLGLSDKAHSILDEMNAC 397
++++ P+ I F I ++A + G +A + DEM +
Sbjct: 533 -----------------SKEILPTPI------SFSILVNALCSKGHLSEAFRVWDEMISK 569
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
+ + +K YC+ ++ + + S G D +Y+ LI + ++ A
Sbjct: 570 SIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKA 629
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
F L + M E + GL+ P++ +NSI+H
Sbjct: 630 FGLVKKMEEKQ------------GGLV----PDVFT------------------YNSILH 655
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKIST 576
FC+ ++++A+ LR+MI P+ TY SLING+V+ + E ++R S
Sbjct: 656 GFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715
Query: 577 DGQ 579
D +
Sbjct: 716 DDK 718
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 156/392 (39%), Gaps = 48/392 (12%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
+I ACNA L G + V A ++ + +S GV N + + G EK+
Sbjct: 189 SIDACNA-LIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTF 247
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEV 336
S + E G +V Y++LIS Y G +E A + M FS TY V
Sbjct: 248 LSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELM------HAMPSKGFSPGVYTYNTV 301
Query: 337 VKGFLQNGNVK------------GLA-------NLIIEAQK-------------LEPSGI 364
+ G ++G + GL+ +L++EA K + +
Sbjct: 302 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDV 361
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
V D ++S G DKA + + G +Y ++ YC++ +EA
Sbjct: 362 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMN 421
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L ++ G +DV Y+ ++ + A LF +M E ++ SY +T L+
Sbjct: 422 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLF--PDSY--TLTILI 477
Query: 485 ENH--RPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
+ H L A L + +++ R+++ +N+++ F K G ++ AK M+ +
Sbjct: 478 DGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 537
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
P ++ L+N + +W E+ K
Sbjct: 538 PTPISFSILVNALCSKGHLSEAFRVWDEMISK 569
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 128/314 (40%), Gaps = 37/314 (11%)
Query: 43 RKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPS 102
RK + + N + QQ ++ + T LH EA K F +T LFP
Sbjct: 412 RKGMISEAMNLRNEMLQQGCAM--DVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPD 469
Query: 103 KPVTNSLIAHLSSLQDNH----NLKRAFASVVYVIEKNPKLLDFQTVHTLL---GSMRNA 155
LI D H NL+ A + EK KL D T +TLL G + +
Sbjct: 470 SYTLTILI-------DGHCKLGNLQNAMELFKKMKEKRIKL-DVVTYNTLLDGFGKVGDI 521
Query: 156 NTAAPAFALVKCMFKNRYFMPFELWGGFLVD-ICRKNSNFVAFLKVFEECCRIALDENLD 214
+TA +A + ++ +P + LV+ +C K AF +V++E ++
Sbjct: 522 DTAKEIWADMV----SKEILPTPISFSILVNALCSKGHLSEAF-RVWDEMISKSI----- 571
Query: 215 FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
KP + CN+ ++G C + SD E +E M G P+ S+ L Y + + K
Sbjct: 572 --KPTVMICNSMIKGYCRS-GNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSK 628
Query: 275 IVELESLMNE--FGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
L M E G + Y+S++ G+ + ++ A + + G + + T
Sbjct: 629 AFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERG----VNPDRST 684
Query: 333 YCEVVKGFLQNGNV 346
Y ++ GF+ N+
Sbjct: 685 YTSLINGFVSQDNL 698
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 147/342 (42%), Gaps = 9/342 (2%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++Y + C + V + + V+ M G PN ++ + G ++ +E
Sbjct: 230 PDVYTYTNLINAYCR-VGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALE 288
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L+ M G Y++LI G+ + + +++L + ++ + Y ++
Sbjct: 289 LKRSMANKGLLPDNYIYATLIDGFCRQKR-STEGKSMLDEMYTMGLKPDHVA---YTALI 344
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
GF++ ++ G + +++ I ++ + +I +G +KA + EM
Sbjct: 345 NGFVKQSDIGGAFQV---KEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMM 401
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + Y ++ Y K +A +L+++I L + A++ D A
Sbjct: 402 GIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRA 461
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
LF++M + Y TI+ GL++ R E L V++D + +N++I
Sbjct: 462 NELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILG-VMKDQGLSPDVFCYNTVII 520
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
FCKAG++E+ K L MI +PN TY + I+GY A +
Sbjct: 521 GFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGE 562
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 205/490 (41%), Gaps = 43/490 (8%)
Query: 74 NLHKSLLTNNTDEA-WKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYV 132
+L K LL N E WK +K + ++ P +LI + K V++
Sbjct: 203 SLSKDLLKGNRVELFWKVYKGMLG-AIVPDVYTYTNLINAYCRVGKVEEGKH----VLFD 257
Query: 133 IEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD-ICRKN 191
+E+ + + T ++ + A A L + M N+ +P L+D CR+
Sbjct: 258 MEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSM-ANKGLLPDNYIYATLIDGFCRQK 316
Query: 192 SNFVAFLKVFEECCRIALDENLDF-MKPNIYACNAALEGCCYGLQS-VSDAEKVIETMSV 249
+ + LDE +KP+ A A + G + QS + A +V E M
Sbjct: 317 RSTEG---------KSMLDEMYTMGLKPDHVAYTALING--FVKQSDIGGAFQVKEEMFA 365
Query: 250 LGVRPNESSFGFLAYLYAL--KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL 307
++ N +F + A ++ L G EK +L S M G + Y+ LI GY K+ N+
Sbjct: 366 RKIKLN--TFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNM 423
Query: 308 ESASRTILLCLGGGNMEQSDFSKETY-C-EVVKGFLQNGNVKGLANLIIE--AQKLEPSG 363
E A ++ +++ + + Y C +V G G++ L E + L+P+
Sbjct: 424 EKAYELLI------EIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNI 477
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
++ I+ V G ++A IL M G S + Y + +CK + E
Sbjct: 478 VIYTT-----IVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGK 532
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
++++ + GL+ +V Y A I + + Q+A F +M ++ I ++ G
Sbjct: 533 SYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGY 592
Query: 484 MEN-HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
++ + + A F + + +V+TH + +IH K G+L++A ++ P
Sbjct: 593 CKDGNTTKAFAKFRCMLDQGVLPDVQTH--SVLIHGLSKNGKLQEAMGVFSELLDKGLVP 650
Query: 543 NDQTYLSLIN 552
+ TY SLI+
Sbjct: 651 DVFTYTSLIS 660
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 144/364 (39%), Gaps = 13/364 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KPN+Y A + G C + + IE + G+ PN+ L Y G K
Sbjct: 543 LKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDS-GIAPNDVICTDLIDGYCKDGNTTKA 601
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
M + G + +S LI G K G L+ A L G + F TY
Sbjct: 602 FAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG-LVPDVF---TYTS 657
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ + G++K L + K GI + +I+ LG KA + D +
Sbjct: 658 LISNLCKEGDLKAAFELHDDMCK---KGINPNIVTYNALINGLCKLGEIAKARELFDGIP 714
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y + YCK EA QL + G+ D Y ALI+ + + +
Sbjct: 715 EKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTE 774
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNS 514
A SLF M E I ++ ++ G + +L+ A+ L E + D + +
Sbjct: 775 KALSLFLGMVEEGIASTP-AFNALIDGFFK--LGKLIEAYQLVEDMVDNHITPNHVTYTI 831
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRK 573
+I C G +++A++ M PN TY SL++GY + + ++ E + R
Sbjct: 832 LIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARG 891
Query: 574 ISTD 577
I D
Sbjct: 892 IKPD 895
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 3/213 (1%)
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
IV D +I+A +G ++ +L +M GC L Y + C+ E
Sbjct: 226 GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDE 285
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A +L +++ GL D Y LI+ + S+ +M + +Y ++
Sbjct: 286 ALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALIN 345
Query: 482 GLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
G ++ + ++ AF + E + ++++ T + ++IH CK G LE A+ M +
Sbjct: 346 GFVK--QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGI 403
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+P+ QTY LI GY + + EIK++
Sbjct: 404 KPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKE 436
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 155/385 (40%), Gaps = 26/385 (6%)
Query: 234 LQSVSDAEKVIETMSVL------GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGF 287
+ +S K+ E M V G+ P+ ++ L +G + EL M + G
Sbjct: 624 IHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGI 683
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK 347
+ +V Y++LI+G KLG + A R + + + ++ TY ++ G+ ++ N+
Sbjct: 684 NPNIVTYNALINGLCKLGEIAKA-RELFDGIPEKGLARNSV---TYSTIIAGYCKSANLT 739
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
L ++ G+ D V +I C G ++KA S+ M G + +
Sbjct: 740 EAFQLF---HGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA-STPAFN 795
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ + K + EA QLV D+ + + + Y LIE T + + A LF +M++
Sbjct: 796 ALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKR 855
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD--WNSIIHAFCKAGRL 525
+ +Y +++ G R M + DE+V +K D W+ ++ A K G
Sbjct: 856 NVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARG---IKPDDLAWSVMVDAHLKEGNW 912
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFE 585
A + + M+ Y LI+ VL + E+++ +G K
Sbjct: 913 IKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEK-------QGSKLS 965
Query: 586 HNLVDAFLYALVKGGFFDAVMQVVE 610
+ + G D ++V+E
Sbjct: 966 LATCGTLVCCFHRAGRTDEALRVLE 990
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 85/408 (20%), Positives = 156/408 (38%), Gaps = 76/408 (18%)
Query: 83 NTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDF 142
NT +A+ F+ + + P T+S++ H L N L+ A +++K + D
Sbjct: 597 NTTKAFAKFRCMLDQGVLPDVQ-THSVLIH--GLSKNGKLQEAMGVFSELLDKGL-VPDV 652
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRK--NSNFVAFLKV 200
T +L+ ++ AF L D+C+K N N V + +
Sbjct: 653 FTYTSLISNLCKEGDLKAAFELHD-------------------DMCKKGINPNIVTYNAL 693
Query: 201 FEECCRIA----LDENLDFMKPNIYACNAA-----LEGCCYGLQSVSDAEKVIETMSVLG 251
C++ E D + A N+ + G C ++++A ++ M ++G
Sbjct: 694 INGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKS-ANLTEAFQLFHGMKLVG 752
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
V P+ + L G EK + L M E G +S F ++LI G+ KLG L A
Sbjct: 753 VPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAF-NALIDGFFKLGKLIEAY 811
Query: 312 RTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQK----------- 358
+ + +M + + TY +++ GN+K L +E QK
Sbjct: 812 QLV------EDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYT 865
Query: 359 --LEPSGIVVDRSVGFGIISACVNLGLSD-------------------KAHSILDEMNAC 397
L + RS F + V G+ KA ++D+M +
Sbjct: 866 SLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSE 925
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
G +V +Y + A CK + +E +++ ++ G +L + L+
Sbjct: 926 GVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLV 973
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 126/599 (21%), Positives = 228/599 (38%), Gaps = 81/599 (13%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEK---NPKLL 140
D+A + F+ + + P+ N++I L N L AF +EK P L+
Sbjct: 213 VDDAIELFRKMEKVGVAPNVVTYNNII---HGLCKNGRLDEAF-QFKEKMEKERVKPSLV 268
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFK---NRYFMPFELWGGFLVDICRKNSNFVAF 197
+ G + N F C+ K +R + P + L+D + N
Sbjct: 269 TY-------GVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTA 321
Query: 198 LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNES 257
L++ + D + + PN CN+ ++G C Q + AE ++E M G N+
Sbjct: 322 LQIRD-------DMISNGISPNSVTCNSLIQGYCKSNQ-MEHAEHLLEEMLTGGGVINQG 373
Query: 258 SFGFLAYLYALK-----------------------------------GLQEKIVELESLM 282
+F + + LK G Q + +EL +
Sbjct: 374 TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL 433
Query: 283 NEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQ 342
E GF++ V ++LI G + G+ E A++ + L G + S +Y ++ +
Sbjct: 434 LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSI----SYNTLILACCK 489
Query: 343 NGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
G V+ L +++ GI D ++ N+G ++A + E G
Sbjct: 490 EGKVEEGFKL---KEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPD 546
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
Y + YCK +R E +L ++ + ++ + Y LI A + + + AF L
Sbjct: 547 AYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRD 606
Query: 463 DMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAF 519
DMR I +Y +++ GL + LDE+ ++ P V + ++I +
Sbjct: 607 DMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVC----YTALIGGY 662
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQ 579
CK G++ L+ M PN TY +ING+ + + +E+ Q
Sbjct: 663 CKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEM-------AQ 715
Query: 580 KGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVA 638
KGI + +A K G + ++V + + +D Y HK L V+
Sbjct: 716 KGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHKPLTVS 774
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 155/393 (39%), Gaps = 29/393 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++Y + + C G V DA ++ M +GV PN ++ + + G ++
Sbjct: 193 VTPDVYLFSTMVNAFCTG-GRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEA 251
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF----SKE 331
+ + M + +V Y LI+G VKL + A+ + E SD +
Sbjct: 252 FQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCIL--------KEMSDRGYAPNNV 303
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
Y ++ G+ + GN+ + + +GI + +I + A +L
Sbjct: 304 VYNTLIDGYCRIGNISTALQI---RDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLL 360
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+EM G + G + + C + R A +M++ + + G L+ +
Sbjct: 361 EEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQN 420
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
A L+ + E + ++ GL E E A L E++E V + +
Sbjct: 421 GKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLV-LDSIS 479
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N++I A CK G++E+ + M+ +P+ TY L++G + +WHE K
Sbjct: 480 YNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK 539
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDA 604
+ N DA+ Y ++ G+ A
Sbjct: 540 KN------------GNFPDAYTYGIMIDGYCKA 560
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/438 (19%), Positives = 164/438 (37%), Gaps = 96/438 (21%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ CN L V + +V + M GV P+ F + + G + +E
Sbjct: 160 PSLKTCNFLLSSLVKA-NEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIE 218
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M + G + +V Y+++I G K G L+ A + F ++
Sbjct: 219 LFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQ---------------FKEK------ 257
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNLGLSDKAHSILDEMNA 396
+E ++++PS V +G+ I+ V L D+A+ IL EM+
Sbjct: 258 ----------------MEKERVKPS------LVTYGVLINGLVKLERFDEANCILKEMSD 295
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + VY + YC+ + A Q+ D+ S+G+ + ++LI+ S +
Sbjct: 296 RGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEH 355
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A L +M L G + + + S+I
Sbjct: 356 AEHLLEEM-------LTGGGV-----------------------------INQGTFTSVI 379
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
H C R + A + M+ F+PND L++G + + +W+ + K
Sbjct: 380 HRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEK--- 436
Query: 577 DGQKGIKFEHNLV--DAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKK 634
F N V +A ++ L + G + +++++ E + +D Y + K+
Sbjct: 437 ------GFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKE 490
Query: 635 LKVAKLRKRNFKKMEALI 652
KV + FK E ++
Sbjct: 491 GKV----EEGFKLKEEMV 504
>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 139/308 (45%), Gaps = 30/308 (9%)
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
G+ K EL + + + G S +V Y++LI G K G++ A + + +G N+ + +
Sbjct: 166 GVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVRRA-KLLFNKMGEVNLVANQY- 223
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
TY ++ GF + G K L +K++ G+ + +I+ N G KA+
Sbjct: 224 --TYTVLINGFFKKGLRKDGFELF---EKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYE 278
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ DEM G + Y + C++ R EA +LV + +G + GN+ + +
Sbjct: 279 LFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYS-NGGNWVDVTD--- 334
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG----LMENHRPELMAAFLDEVVEDPRV 505
L R+M E I K +Y TI+T L + + + +++V P V
Sbjct: 335 ----------LVREMEERGISPSKVTY-TILTNAHVRLGDMEKAFHFYSSMEKVGLVPDV 383
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
H + ++H C G +++A + R M ++ EPN+ Y ++INGY A F L
Sbjct: 384 ----HIYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALR 439
Query: 566 MWHEIKRK 573
E++ K
Sbjct: 440 FLKEMEDK 447
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 37/258 (14%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
++F+E C+ + N + N + G C + + +AEK+++ M G
Sbjct: 278 ELFDEMCKRGVVSN-------VVTYNTLISGLCRKTR-IWEAEKLVDQMKRAG------- 322
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
Y+ G + +L M E G S V Y+ L + +V+LG++E A
Sbjct: 323 -------YSNGGNWVDVTDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAFHFY---- 371
Query: 319 GGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGI 374
+ME+ + Y ++ G GN+K + L + KLEP+ +V + +
Sbjct: 372 --SSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNT-----M 424
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
I+ G S +A L EM + Y T+ CK+ + EA L+ + SGL
Sbjct: 425 INGYCKAGNSFRALRFLKEMEDKRLVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGL 484
Query: 435 QLDVGNYDALIEASITSQ 452
+ V Y+ + +A + +
Sbjct: 485 EPSVSIYNIISKAKYSKE 502
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 109/249 (43%), Gaps = 11/249 (4%)
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++ ++Q+G+++ LA ++ ++ G+V + ++ ++ + V +K + +
Sbjct: 86 YESIISVYIQSGSIE-LA--VLYFNQMVDKGLVFEPNIFNTLLDSLVKSKCFEKLWFVFN 142
Query: 393 EMNACGCSVGLGVYV--PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
E+ + L VY +K C+ + +L+ D+ GL +V Y LI+
Sbjct: 143 EVKG---KIELDVYTYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCK 199
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH-RPELMAAFLDEVVEDPRVEVKT 509
+ D + A LF M E + + +Y ++ G + R + F E ++ V
Sbjct: 200 NGDVRRAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELF--EKMQLDGVFPNL 257
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+ +N +I+ FC G+L A M N TY +LI+G + + + +
Sbjct: 258 YTYNCMINEFCNEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQ 317
Query: 570 IKRKISTDG 578
+KR ++G
Sbjct: 318 MKRAGYSNG 326
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 139/314 (44%), Gaps = 14/314 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KPN+ NA ++ C G + A ++ + M GV+P+ +F L + GL E
Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAA 310
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
L S M G + Y++L+ K G ++ A + + M + TY
Sbjct: 311 RNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIM------SEMPRKHIMPNVVTY 364
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
V+ G+ + G + NL E ++ + I +DR ++S LG ++A ++ E
Sbjct: 365 STVIDGYAKAGRLDEALNLFNE---MKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKE 421
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + G Y L Y K+ + E ++ ++ + + ++ Y LI+
Sbjct: 422 MESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGL 481
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV-EDPRVEVKTHDW 512
+Q A +FR+ ++A + Y ++ L +N E +FLDE+ E R V T +
Sbjct: 482 YQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVT--Y 539
Query: 513 NSIIHAFCKAGRLE 526
NSII AF ++G E
Sbjct: 540 NSIIDAFGRSGSAE 553
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 128/289 (44%), Gaps = 20/289 (6%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+IS LG + A ++ + G + + + AY + EA ++ + SSG
Sbjct: 191 MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG 250
Query: 434 LQLDVGNYDALIEA-SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT-----GLMENH 487
L+ ++ Y+A+I+A DF A +F +M + + ++ +++ GL E
Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAA 310
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
R L + L +E +N+++ A CK G+++ A + + M PN TY
Sbjct: 311 R-NLFSEMLYRGIEQ-----DIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTY 364
Query: 548 LSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQ 607
++I+GY A + L +++E+ K ++ G + + + L K G F+ +
Sbjct: 365 STVIDGYAKAGRLDEALNLFNEM--KFASIGLDRVSY-----NTLLSIYAKLGRFEEALN 417
Query: 608 VVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKN 656
V ++ + + D Y A + + K + KR F++M+A F N
Sbjct: 418 VCKEMESSGIKKDAVTY-NALLGGYGKQGKYEEVKRVFEEMKAERIFPN 465
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/453 (20%), Positives = 180/453 (39%), Gaps = 62/453 (13%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
++H LL S+ +APAFAL +++ R + + L +C V L++ +
Sbjct: 87 SLHPLLSSL----PSAPAFALFADIYRLRLPLCTTTFNIMLRHLC-ATGKPVRALELLRQ 141
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
R PN N + G C + + E + E G+ P++ ++ L
Sbjct: 142 MPR-----------PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLI 190
Query: 264 YLYALKGLQEKIVEL-ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ G E V++ + ++ + + V Y++LI GY +G L+ A + +
Sbjct: 191 SGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQY------RED 244
Query: 323 MEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
M Q + TY ++ + ++ E QK +G D +I+
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQK---NGFSPDVFTYNILINGYCK 301
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G KA + +EM+ G Y + + ++ + E +L G++ DV
Sbjct: 302 EGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVM 361
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y+ALI + T D + A+ + +M + RI +Y T+M G R + +DE+
Sbjct: 362 YNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMT 421
Query: 501 E---------------------DPRVEVKTHD-------------WNSIIHAFCKAGRLE 526
+ D + ++ D +N++I CK + +
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGD 481
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
DA+ ++ M+ P+D TY+SLI G T ++
Sbjct: 482 DAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 89/258 (34%), Gaps = 53/258 (20%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE-AR 468
L+ C + A +L+ + + Y+ +I Q+A + R+MRE
Sbjct: 123 LRHLCATGKPVRALELLRQMPRP----NAVTYNTVIAGFCARGRVQAALEVMREMRERGG 178
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE-- 526
I K +Y T+++G + R E DE++ V +N++I +C G+L+
Sbjct: 179 IAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVA 238
Query: 527 ---------------------------------DAKRTLRRMIFLQFEPNDQTYLSLING 553
DA L M F P+ TY LING
Sbjct: 239 LQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILING 298
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
Y L ++ E+ QKG++ + +Y + G QV E +
Sbjct: 299 YCKEGNEKKALEVFEEMS-------QKGVRATAVTYTSLIYVFSRKG------QVQETDR 345
Query: 614 EMKVFVDKWKYKQAFMEN 631
V V K M N
Sbjct: 346 LFNVAVKKGIRPDVVMYN 363
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 168/392 (42%), Gaps = 23/392 (5%)
Query: 193 NFVAFLKVFEECCRIA--LDENLDF-------MKPNIYACNAALEGCCYGLQSVSDAEKV 243
N AF KV C+ L+ L M N++ N + G C + + +A ++
Sbjct: 185 NLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR-LPEAVRL 243
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGL-QEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
++ M V P+ ++ L K + QE + L +MN+ G Y+++I GY
Sbjct: 244 VDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ-GCLPDDFTYNTIIDGYC 301
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
K+ ++ A+ + + G + + TYC ++ G G+V+ L EAQ
Sbjct: 302 KISMVQEATELLKDAVFKGFVPD----QVTYCSLINGLCAEGDVERALELFNEAQA---K 354
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
GI D V ++ GL A +++EM GC + Y + CK ++A
Sbjct: 355 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 414
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
T ++ D G DV ++ LI+ SA L M E I +Y +++ G
Sbjct: 415 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 474
Query: 483 LMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
L + + E+ F + +++ T +N +I FC++ ++E+A + + +M
Sbjct: 475 LCKAGKVNEVNETFQEMILKGCHPNPIT--YNILIENFCRSNKMEEASKVIVKMSQEGLH 532
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
P+ ++ +LI G+ +++ +++ K
Sbjct: 533 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 564
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/339 (19%), Positives = 143/339 (42%), Gaps = 11/339 (3%)
Query: 233 GLQSVSDAEKVIETMS---VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
GL + D E+ +E + G++P+ + L L+GL +++ + M E G
Sbjct: 334 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 393
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
+ Y+ +I+G K+GN+ A+ + + G + T+ ++ G+ + +
Sbjct: 394 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV----FTFNTLIDGYCKRLKLDSA 449
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
L+ +++ GI D +++ G ++ + EM GC Y
Sbjct: 450 LQLV---ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 506
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ +C+ ++ EA+++++ +S GL D +++ LI + D + A+ LF+ + E
Sbjct: 507 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 566
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
++ T++ + DE++ ++ + +I CK ++ A
Sbjct: 567 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH-RADSYTYRVLIDGSCKTANVDRAY 625
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
L MI F P+ T+ +IN + F + + H
Sbjct: 626 MHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 664
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 9/243 (3%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G + A + D+M L + L A CK EA L+ + G+ +++ Y
Sbjct: 165 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTY 224
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ I + A L MR + D+ +Y T++ GL + P+ +L ++
Sbjct: 225 NIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVV-TYNTLIRGLCKKSMPQEAMHYLRRMMN 283
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
+ +N+II +CK +++A L+ +F F P+ TY SLING
Sbjct: 284 QGCLP-DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 342
Query: 562 SVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
L +++E + KGIK + + ++ + L G +QV+ + E D
Sbjct: 343 RALELFNEAQ-------AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDI 395
Query: 622 WKY 624
Y
Sbjct: 396 QTY 398
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 94/241 (39%), Gaps = 27/241 (11%)
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+ +A L M GC Y + YCK EAT+L+ D G D Y
Sbjct: 270 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 329
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN----HRPELMAAFLDE 498
+LI D + A LF + + I Y +++ GL H ++M +E
Sbjct: 330 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 389
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
P ++ +N +I+ CK G + DA + I + P+ T+ +LI+GY
Sbjct: 390 GCH-PDIQT----YNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL 444
Query: 559 QYFSVLM----MWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+ S L MW + GI + ++ L L K G V +V E QE
Sbjct: 445 KLDSALQLVERMW-----------EYGIAPDTITYNSVLNGLCKAG---KVNEVNETFQE 490
Query: 615 M 615
M
Sbjct: 491 M 491
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
I+ A V+ D+AH + M A G S L + L+++C R A +L+ +
Sbjct: 90 AIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR 149
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G Y ++ A LF M ++ ++ ++ L + R +++
Sbjct: 150 G----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCK--RGDVL 203
Query: 493 AA--FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
A L +V++ + + +N I C+AGRL +A R + M P+ TY +L
Sbjct: 204 EAGLLLGKVIQR-GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTL 261
Query: 551 ING 553
I G
Sbjct: 262 IRG 264
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 187/486 (38%), Gaps = 69/486 (14%)
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
F ++ L +R+ A +AL++ R P + G LV+ K L+V
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVR---PDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETM--SVLGVRPNESSF 259
+ R LD ++P++ N ++G C V +A +E SV G PN ++
Sbjct: 196 DGMSRQDLD-----IRPDVVTLNTVVDGLCKS-GRVQEALAFVEQRMSSVHGCPPNTVTY 249
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-----SRTI 314
L + G EL M G +V ++++ G + G +A +
Sbjct: 250 NCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT 309
Query: 315 LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
+ G GN TY +V L NV G+A + + E G D + F +
Sbjct: 310 VWPEGKGN-------AVTYSTLVGALLHTNNV-GMAMELFHEKMSE--GHSPDAIMYFTM 359
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
IS G + A S+ M G + Y + +C++ R EA +L+ ++ G+
Sbjct: 360 ISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI 419
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+ DV Y+ L+ S + DF + L M + G +++T
Sbjct: 420 RPDVCTYNTLLSGSCKAGDFAAVDELLGKMID------DGCQPSVIT------------- 460
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ +++H +CK G++++A R LR M PN+ Y +LI+
Sbjct: 461 -----------------FGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFL 503
Query: 555 VTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+ ++ E+K +K + +A L L + +++++ +E
Sbjct: 504 CKRGDVDLAIELFDEMK-------EKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMRE 556
Query: 615 MKVFVD 620
+ F D
Sbjct: 557 ERCFPD 562
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 167/407 (41%), Gaps = 54/407 (13%)
Query: 169 FKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIA--------LDENLDF-MKPN 219
F +R ++ WG N +AF F+ I LD+ L + +
Sbjct: 175 FTHRLIYTYKYWG----------PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVT 224
Query: 220 IYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELE 279
+ +CNA L + + E I+ G+ N +S+ + Y G K+ E
Sbjct: 225 VDSCNAFLSRIANNSEGI---EMAIKVFCEYGISWNTTSYNIIIYSLCRLG---KVKEAH 278
Query: 280 SLMNEFGFSS---QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY--- 333
L+ + F S +V YS++I GY LG L+ A + + +M+ Y
Sbjct: 279 RLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM------DDMQIKGLKPNRYTYN 332
Query: 334 ------CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
C++ K F ++ + +QK+ P +V +I LG A
Sbjct: 333 SIILLLCKIGKSFEAEKVLREMM-----SQKIIPDNVVYT-----TLIHGFFKLGHVRTA 382
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ DEM + S Y ++ + + + E L ++ S GL+ D Y LI+
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ + +AFSL +M + + +Y ++ GL ++ + LDE + +++
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE-MRKKGLQL 501
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+NS+++ CKAG +E A + ++ M +P+ TY ++I+ Y
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 168/414 (40%), Gaps = 58/414 (14%)
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
+E R+ + + P++ + + ++G C+ L + A K+++ M + G++PN ++
Sbjct: 275 KEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH-LGELKKALKLMDDMQIKGLKPNRYTYNS 333
Query: 262 LAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ L G K E E ++ E V Y++LI G+ KLG++ +A++
Sbjct: 334 IILLLCKIG---KSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWF---- 386
Query: 319 GGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSV---- 370
M S + TY +++GF Q G V NL E ++ L+P + +
Sbjct: 387 --DEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444
Query: 371 -------GFGIISACVNLGLS-------------------DKAHSILDEMNACGCSVGLG 404
F + + V +G++ D A+ +LDEM G + +
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
+Y + CK +A +L+ ++ +G+ D Y +I+A D A L ++M
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564
Query: 465 REARIYDLKGSYLTIMTGL----MENHRPELMAAFLDE-VVEDPRVEVKTHDWNSIIHAF 519
+ + ++ +M G M L+ L++ +V D +N+++
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAIT------YNTLMKQH 618
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
C + + +RM P+ TY LI G+ A ++ E+ K
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 114/301 (37%), Gaps = 69/301 (22%)
Query: 234 LQSVSDAEKVIETMSVL------GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGF 287
+Q KVIE ++ G++P+E ++ L +Y G L + M + G
Sbjct: 405 IQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464
Query: 288 SSQMVFYSSLISGYVKLGNLESASR----------TILLCL---------GGGNMEQS-- 326
+ +V Y +LI G K G L++A+ + +C+ GN+EQ+
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524
Query: 327 ----------DFSKETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVV-------- 366
D TY V+ + + G++ L+ E + L+P+ +
Sbjct: 525 LMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC 584
Query: 367 --------DRSVGF----GIISACVNLGLSDKAHSILDEMNAC----------GCSVGLG 404
DR +G+ GI+ + K H I + MN G +
Sbjct: 585 MLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSN 644
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y +K +CK EA L ++ G V +Y+ALI+ + F A LF +M
Sbjct: 645 TYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEM 704
Query: 465 R 465
R
Sbjct: 705 R 705
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
T +N II++ C+ G++++A R L +M F P+ +Y ++I+GY + L +
Sbjct: 258 TTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMD 317
Query: 569 EIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAF 628
+++ K G K ++ +N + L + G F+A +V+ + K+ D Y
Sbjct: 318 DMQIK----GLKPNRYTYNSIILLLCKI--GKSFEA-EKVLREMMSQKIIPDNVVYTTLI 370
Query: 629 MENHKKLKVAKLRKRN 644
H K+ +R N
Sbjct: 371 ---HGFFKLGHVRTAN 383
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 191/462 (41%), Gaps = 83/462 (17%)
Query: 110 IAHLSSLQDNHNLKRAFASVVYVIEK------NPKLLDFQTVHTLLGSMRNANTAAPAFA 163
I LSSL + + + + V ++++ P + F +TL+ + N A+ A A
Sbjct: 151 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF---NTLIHGLFLHNKASEAMA 207
Query: 164 LVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAF--LKVFEECCRIALDENLDFMKPNIY 221
L+ M +G + +C++ +AF L E+ ++P +
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ----------GKLEPGVL 257
Query: 222 ACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESL 281
N ++G C + + DA + + M G+RPN
Sbjct: 258 IYNTIIDGLC-KYKHMDDALNLFKEMETKGIRPN-------------------------- 290
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKG 339
+V YSSLIS G ASR + +M + + + T+ ++
Sbjct: 291 ---------VVTYSSLISCLCNYGRWSDASRLL------SDMIERKINPDVFTFSALIDA 335
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA-------CVNLGLSDKAHSILD 392
F++ G ++EA+KL +V RS+ I++ C++ L D+A + +
Sbjct: 336 FVKEGK-------LVEAEKLYDE--MVKRSIDPSIVTYSSLINGFCMHDRL-DEAKQMFE 385
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M + C + Y +K +CK R E ++ ++S GL + Y+ LI+ +
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
D A +F++M + +Y T++ GL +N + E A + E ++ ++E + +
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE-KAMVVFEYLQRSKMEPTIYTY 504
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
N +I CKAG++ED + +P+ Y ++I+G+
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 146/375 (38%), Gaps = 42/375 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PNI ++ L G C+ + +S+A +++ M V G +PN +F L + L + +
Sbjct: 148 EPNIVTLSSLLNGYCHS-KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
L M G +V Y +++G K G+ + A + MEQ Y
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL------NKMEQGKLEPGVLIYN 260
Query: 335 EVVKGFLQNGNVKGLANLI--IEAQKLEPSGI------------------------VVDR 368
++ G + ++ NL +E + + P+ + +++R
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 369 SVG------FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
+ +I A V G +A + DEM + Y + +C R EA
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
Q+ + S DV Y+ LI+ + + +FR+M + + +Y ++ G
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
L + ++ E+V D V +N+++ CK G+LE A + + EP
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 543 NDQTYLSLINGYVTA 557
TY +I G A
Sbjct: 500 TIYTYNIMIEGMCKA 514
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 155/371 (41%), Gaps = 23/371 (6%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
E M LG+ N ++ L + + + + M + G+ +V SSL++GY
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKETYCEVVKG-FLQNGNVKGLANLIIEAQKLEPSG 363
+ A + G + T+ ++ G FL N + +A + ++ G
Sbjct: 165 KRISEAVALVDQMFVTGYQPNT----VTFNTLIHGLFLHNKASEAMALI----DRMVAKG 216
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
D +++ G +D A ++L++M G+ +Y + CK +A
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
L ++ + G++ +V Y +LI + A L DM E +I ++ ++
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 484 MENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
++ + DE+V+ DP + ++S+I+ FC RL++AK+ M+
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVT----YSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
P+ TY +LI G+ ++ + E+ R++S G G +N++ + L + G
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGM----EVFREMSQRGLVGNTVTYNIL---IQGLFQAG 445
Query: 601 FFDAVMQVVEK 611
D ++ ++
Sbjct: 446 DCDMAQEIFKE 456
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 17/237 (7%)
Query: 80 LTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL 139
+ + DEA + F+ + + FP N+LI KR + E + +
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC------KYKRVEEGMEVFREMSQRG 426
Query: 140 LDFQTV--HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAF 197
L TV + L+ + A A + K M + + L +C KN
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC-KNGKLEKA 485
Query: 198 LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNES 257
+ VFE R M+P IY N +EG C V D + +S+ GV+P+
Sbjct: 486 MVVFEYLQRSK-------MEPTIYTYNIMIEGMCKA-GKVEDGWDLFCNLSLKGVKPDVV 537
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
++ + + KG +E+ L M E G Y++LI ++ G+ E+++ I
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A +LF +M ++R + + +++ + + ++ +++ + L E +++ + + ++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVIS-LGEQMQNLGIPHNHYTYS 120
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+I+ FC+ +L A L +M+ L +EPN T SL+NGY +++
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 8/215 (3%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+K CK + EA + ++D++ G Q D+ Y A ++ I Q+ A LF+D+
Sbjct: 436 VKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGY 495
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+Y ++ GL + R L E+ E V +N++I CK LE+A
Sbjct: 496 CPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAV-TYNTLIDGLCKTDHLEEAM 554
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
L MI + EPN TY +LING A + L++W+E+ RK T
Sbjct: 555 LFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYM------ 608
Query: 590 DAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
AF++ L G + + + + +E ++ D + Y
Sbjct: 609 -AFIHGLSNCGRPNEALVYLREMEEREMKPDTYVY 642
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 7/186 (3%)
Query: 376 SACVNLGL-----SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
SAC++ GL D+A + ++ A G + Y +K CK R AEA L+ ++
Sbjct: 468 SACLD-GLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEME 526
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
GL Y+ LI+ + + A M E +Y T++ GL RP+
Sbjct: 527 EKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPD 586
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+E+ + + + IH GR +A LR M + +P+ Y+ L
Sbjct: 587 DALVLWNEMGRK-GCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGL 645
Query: 551 INGYVT 556
+N ++
Sbjct: 646 LNAFLV 651
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 53/267 (19%)
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
E C+ +D + +P+I A +A L+G +Q V A K+ + + G P+ +
Sbjct: 447 EACKFLVDMAEEGFQPDIVAYSACLDG-LIKIQEVDQALKLFQDICAQGYCPD-----VI 500
Query: 263 AYLYALKGL--QEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
AY +KGL ++I E ++L++E G V Y++LI G K +LE A
Sbjct: 501 AYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAML----- 555
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
FL +++IE ++ EP+ I +I+
Sbjct: 556 ----------------------FL---------SMMIEKER-EPNVITYST-----LING 578
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
N G D A + +EM GC+ Y+ + R EA + ++ ++ D
Sbjct: 579 LCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPD 638
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDM 464
Y L+ A + + AF + ++M
Sbjct: 639 TYVYVGLLNAFLVDSNQPLAFEILQEM 665
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 149/369 (40%), Gaps = 69/369 (18%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ A N ++G + +A KV++ M P E ++G L G E+ E
Sbjct: 258 PDAIAYNTMIDGLAKAGHA-QEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
L +M GF V Y+SLI G+ K G ++ A C M ++ + + T+
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA------CSLFDEMVEAGYRPDVITHTV 370
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G ++GN + A E + VV + II +G A I+ M
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTT---IIQGLSKIGRVANAFRIMKGMI 427
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI----SSSGLQLDVGNYDALIEASITS 451
A GC Y+ L +CK R EA QL+ ++ SS LQL
Sbjct: 428 AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQL--------------- 472
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
Y +++ GL + E LD++ E + +T D
Sbjct: 473 ------------------------YSSLVNGLCDGGSVE---KTLDDLFEQSKAAAETLD 505
Query: 512 WN---SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA-----EQYFSV 563
SII CK GRL++A R +RM+ +P+ TY LING + E+ F++
Sbjct: 506 PGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFAL 565
Query: 564 LMMWHEIKR 572
L H++++
Sbjct: 566 L---HDLEK 571
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 169/409 (41%), Gaps = 36/409 (8%)
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG 233
+ P + ++D K+ NF K FEE R KPN+ ++G
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGC-------KPNVVTYTTIIQGL-SK 412
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
+ V++A ++++ M G P+ ++ L + G ++ +L +++ S +
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQL 472
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY-----CEVVKGFLQNGNVKG 348
YSSL++G G++E + EQS + ET C ++ G + G +
Sbjct: 473 YSSLVNGLCDGGSVEKTLDDLF--------EQSKAAAETLDPGLCCSIIVGLCKTGRLDE 524
Query: 349 LANLIIEAQKLEPSGIVVDRSVGFGIISACVNL--GLSDKAHSILDEMNACGCSVGLGVY 406
+ Q++ G D + +I+ ++A ++L ++ G Y
Sbjct: 525 ACRIF---QRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTY 581
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-R 465
P CK A +++ + SS G DV Y AL A SLF++M R
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV---EDPRVEVKTHDWNSIIHAFCKA 522
+ D +Y I+ GL++ + E F DE++ + P V + +++ A C A
Sbjct: 642 QGGAPD-AAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVAT----YTALVQALCHA 696
Query: 523 GRLEDAKRTLRRMIFL-QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
G +++A M+ + + Y +LI+G+ A + + L ++ ++
Sbjct: 697 GNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDM 745
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 126/316 (39%), Gaps = 19/316 (6%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
E M G+ PN SF L +A + V +M + + L+ K
Sbjct: 143 EEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKA 202
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
G E A + G + + + +V+ L+ VK + ++E G
Sbjct: 203 GMDEKAFEVFHEMMAMGFVPPD---RALHTAMVRTLLKAKRVKEAREVF---GQMEKCGF 256
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC---SVGLGVYVPTLKAYCKEHRTAE 421
D +I G + +A +LD M A C V G+ V +L CK
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSL---CKAGTLER 313
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A +L +++SG + + Y +LI S + A SLF +M EA ++ ++
Sbjct: 314 AEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID 373
Query: 482 GLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
GL ++ E A +E++ P V + +II K GR+ +A R ++ MI
Sbjct: 374 GLCKSGNFEQAAKSFEEMMRGGCKPNVVT----YTTIIQGLSKIGRVANAFRIMKGMIAH 429
Query: 539 QFEPNDQTYLSLINGY 554
P+ TY+ L++G+
Sbjct: 430 GCFPDSVTYICLLDGF 445
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 2/188 (1%)
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG-LQLDVGNYD 442
+D A + + M C L ++ + CK +A ++ ++ + G + D +
Sbjct: 170 ADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHT 229
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
A++ + ++ + A +F M + +Y T++ GL + + LD ++
Sbjct: 230 AMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
V + + ++++ CKAG LE A+ R M F PN Y SLI+G+ + +
Sbjct: 290 ACVPTEV-TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKE 348
Query: 563 VLMMWHEI 570
++ E+
Sbjct: 349 ACSLFDEM 356
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 83/203 (40%), Gaps = 3/203 (1%)
Query: 372 FGIISACV-NLGLSDKAHSILDEMNACG-CSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
F I+ C+ G+ +KA + EM A G ++ ++ K R EA ++ +
Sbjct: 192 FLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQM 251
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
G D Y+ +I+ + Q A + +M + +Y ++ L +
Sbjct: 252 EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTL 311
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
E A L V+ + + S+IH F K+GR+++A M+ + P+ T+
Sbjct: 312 E-RAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370
Query: 550 LINGYVTAEQYFSVLMMWHEIKR 572
+I+G + + + E+ R
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMR 393
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 149/385 (38%), Gaps = 32/385 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M+P + + ++G + + DA V++ M+ G PN + L + G K
Sbjct: 326 MEPTLITYSILVKGLTRA-KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG-GGNMEQSDFSKETYC 334
+E++ LM G S Y++LI GY K G ++A R + L G N+ Q F+ C
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT-SVIC 443
Query: 335 EVVK----------------------GFLQNGNVKGLANLIIEAQKLE------PSGIVV 366
+ G L + GL ++ LE G VV
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D ++ G D+A I E+ GC + Y + C + + EA +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
++ GL+ D Y LI + A + D + + +Y ++ G +
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
R E F DE++ V+ T +N +I A+C++GRL A M PN T
Sbjct: 624 ERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIK 571
Y SLI G + +++ E++
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEMR 707
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 158/382 (41%), Gaps = 54/382 (14%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
F++CC A D + P++Y A+ C G V +A K+ M GV PN +F
Sbjct: 242 FQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKG-GKVEEAVKLFSKMEEAGVAPNVVTFN 299
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
+ + G ++ + M E G ++ YS L+ G L A R +G
Sbjct: 300 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG------LTRAKR-----IGD 348
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
+ +K KGF P ++V + +I + +
Sbjct: 349 AYFVLKEMTK-------KGF--------------------PPNVIVYNN----LIDSFIE 377
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G +KA I D M + G S+ Y +K YCK + A +L+ ++ S G ++ G+
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP----ELMAAFL 496
+ ++I + F SA +M + G T+++GL ++ + EL FL
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
++ V T N+++H C+AG+L++A R + ++ + +Y +LI+G
Sbjct: 498 NK-----GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 557 AEQYFSVLMMWHE-IKRKISTD 577
++ M E +KR + D
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPD 574
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 86/232 (37%), Gaps = 44/232 (18%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I C +++ DEM + VY ++AYC+ R + A +L D+ G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ + Y +LI+ + A LF +MR M GL
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMR--------------MEGL---------- 711
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+P V + ++I + K G++ + LR M PN TY +I G
Sbjct: 712 --------EPNV----FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVK-GGFFDA 604
Y + +E++ +KGI + F+Y +K GG +A
Sbjct: 760 YARDGNVTEASRLLNEMR-------EKGIVPDSITYKEFIYGYLKQGGVLEA 804
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 134/302 (44%), Gaps = 13/302 (4%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+PNE + + + +GL EK E+ M G + + +++LI+ Y + G +S+
Sbjct: 143 KPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSS-- 200
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNG-NVKGLANLIIEAQKLEPSGIVVDRSVG 371
L L E+ S TY V+ + G + + L L + + GI D
Sbjct: 201 --LELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQ---MRHEGIQADIVTY 255
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
++SAC GL D+A + MN G + Y ++ + K +R + ++L+ ++ S
Sbjct: 256 NTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMES 315
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH--RP 489
G D+ +Y+ L+EA S + A +FR M+ A +Y +I+ L H
Sbjct: 316 GGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATY-SILLNLYGRHGRYD 374
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
++ FL+ V + E +N +I+ F + G ++ M+ EPN +TY
Sbjct: 375 DVRDLFLEMKVSN--TEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEG 432
Query: 550 LI 551
LI
Sbjct: 433 LI 434
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/417 (19%), Positives = 169/417 (40%), Gaps = 54/417 (12%)
Query: 189 RKNSNFVAFLKVFEECCRIALD-ENL---------DFMKPNIYACNAALEGCCY-GLQSV 237
R + + + + V C R LD E L + ++ +I N L C GL
Sbjct: 211 RVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGD- 269
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+AE V TM+ G+ P+ +++ +L + EK+ EL M G + Y+ L
Sbjct: 270 -EAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVL 328
Query: 298 ISGYVKLGNLE-----------------SASRTILLCLGGGNMEQSDF------------ 328
+ + + G+++ +A+ +ILL L G + D
Sbjct: 329 LEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNT 388
Query: 329 --SKETYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLS 384
+ TY ++ F + G K + L + + +EP+ + G+I AC GL
Sbjct: 389 EPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYE-----GLIFACGKGGLH 443
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
+ A IL MN G Y ++AY + EA ++ G + V Y++L
Sbjct: 444 EDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSL 503
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDP 503
I+ ++ + ++ M ++ + + ++ ++ + + E + A+++ +E
Sbjct: 504 IQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVE--MEKA 561
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
R + +++ +C AG +E+++ + L P+ Y ++ Y A+++
Sbjct: 562 RCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRW 618
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 109/281 (38%), Gaps = 7/281 (2%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
V PN ++ L + GL E ++ MNE G Y+ +I Y + E A
Sbjct: 423 VEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEA- 481
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
L+ N S + ETY +++ F + G K +++ K+ SG+ +R
Sbjct: 482 ---LVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILL---KMGQSGVARNRDTF 535
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
G+I A G ++A EM C L YC E+ + +I +
Sbjct: 536 NGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKA 595
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
G+ V Y ++ + + A L +M R+ ++ ++ G ++
Sbjct: 596 LGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQ 655
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
M ++ E ++ + +N+++ A G+ E A R L
Sbjct: 656 MVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVL 696
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 121/315 (38%), Gaps = 60/315 (19%)
Query: 181 GGFLVDICRKNSNFVAFLKVFEECCRI-ALDENLDFMK-----PNIYACNAALEGCCYGL 234
GG L DI + + ++ F + R+ + E L M+ P+I + N LE
Sbjct: 281 GGILPDI----TTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQS- 335
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG---------LQEKIVELES----- 280
S+ +A V M G PN +++ L LY G L+ K+ E
Sbjct: 336 GSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATY 395
Query: 281 --LMNEFG----FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
L+N FG F + + ++ V+ N+E+ I C GG E +
Sbjct: 396 NILINVFGEGGYFKEVVTLFHDMVEENVE-PNMETYEGLIFACGKGGLHEDA-------- 446
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF-GIISACVNLGLSDKAHSILDE 393
K L + N KG VV S + G+I A L ++A +
Sbjct: 447 ---KKILLHMNEKG----------------VVPSSKAYTGVIEAYGQAALYEEALVAFNT 487
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
MN G + Y ++ + K E+ +++ + SG+ + ++ +IEA
Sbjct: 488 MNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQ 547
Query: 454 FQSAFSLFRDMREAR 468
F+ A + +M +AR
Sbjct: 548 FEEAIKAYVEMEKAR 562
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 149/385 (38%), Gaps = 32/385 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M+P + + ++G + + DA V++ M+ G PN + L + G K
Sbjct: 339 MEPTLITYSILVKGLTRA-KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 397
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG-GGNMEQSDFSKETYC 334
+E++ LM G S Y++LI GY K G ++A R + L G N+ Q F+ C
Sbjct: 398 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT-SVIC 456
Query: 335 EVVK----------------------GFLQNGNVKGLANLIIEAQKLE------PSGIVV 366
+ G L + GL ++ LE G VV
Sbjct: 457 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 516
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D ++ G D+A I E+ GC + Y + C + + EA +
Sbjct: 517 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 576
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
++ GL+ D Y LI + A + D + + +Y ++ G +
Sbjct: 577 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 636
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
R E F DE++ V+ T +N +I A+C++GRL A M PN T
Sbjct: 637 ERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 695
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIK 571
Y SLI G + +++ E++
Sbjct: 696 YTSLIKGMSIISRVEEAKLLFEEMR 720
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 158/382 (41%), Gaps = 54/382 (14%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
F++CC A D + P++Y A+ C G V +A K+ M GV PN +F
Sbjct: 255 FQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKG-GKVEEAVKLFSKMEEAGVAPNVVTFN 312
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
+ + G ++ + M E G ++ YS L+ G L A R +G
Sbjct: 313 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG------LTRAKR-----IGD 361
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
+ +K KGF P ++V + +I + +
Sbjct: 362 AYFVLKEMTK-------KGF--------------------PPNVIVYNN----LIDSFIE 390
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G +KA I D M + G S+ Y +K YCK + A +L+ ++ S G ++ G+
Sbjct: 391 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 450
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP----ELMAAFL 496
+ ++I + F SA +M + G T+++GL ++ + EL FL
Sbjct: 451 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 510
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
++ V T N+++H C+AG+L++A R + ++ + +Y +LI+G
Sbjct: 511 NK-----GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 565
Query: 557 AEQYFSVLMMWHE-IKRKISTD 577
++ M E +KR + D
Sbjct: 566 KKKLDEAFMFLDEMVKRGLKPD 587
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 86/232 (37%), Gaps = 44/232 (18%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I C +++ DEM + VY ++AYC+ R + A +L D+ G
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 688
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ + Y +LI+ + A LF +MR M GL
Sbjct: 689 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMR--------------MEGL---------- 724
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+P V + ++I + K G++ + LR M PN TY +I G
Sbjct: 725 --------EPNV----FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 772
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVK-GGFFDA 604
Y + +E++ +KGI + F+Y +K GG +A
Sbjct: 773 YARDGNVTEASRLLNEMR-------EKGIVPDSITYKEFIYGYLKQGGVLEA 817
>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 660
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 152/343 (44%), Gaps = 27/343 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I+ACN ++ C + DA +++E M G P+ ++ + + V
Sbjct: 258 PDIWACNIYIDCLCKQ-NRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVG 316
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA----SRTILLCLGGGNMEQSDFSKETY 333
L M + G +V +LI G K +E A SR + L N+E S Y
Sbjct: 317 LWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSL-----NIE---LSVSIY 368
Query: 334 CEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ GF + G++ +I + EP VV ++ +++ +G+ +KA +++
Sbjct: 369 NALISGFWRAGSIDKAYTIISFMRTNGCEPG--VVTYNI---LLNHYCTIGMMEKAENLI 423
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+M G + Y LK CK H+ +A V D G D+ + + LI+A
Sbjct: 424 TKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKV 483
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVK 508
+ +SA LF++M + +Y T++ GL L +++++ DP V +
Sbjct: 484 KKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNL- 542
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+N ++H CK G L+ A++ MI + P+ TY +LI
Sbjct: 543 ---YNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLI 582
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 142/353 (40%), Gaps = 20/353 (5%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T T++G + N + A L + M K G + +C KNS +
Sbjct: 294 DVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLC-KNSKVE---EA 349
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
FE R+ L N++ + +IY NA + G + S+ A +I M G P ++
Sbjct: 350 FELASRM-LSLNIE-LSVSIY--NALISGF-WRAGSIDKAYTIISFMRTNGCEPGVVTYN 404
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L Y G+ EK L + M G + Y+ L+ G K L+ A +
Sbjct: 405 ILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFV-----S 459
Query: 321 GNMEQSDFSKETYCEV-VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISAC 378
+ME F C + + F + VK L ++++ G+ D +V +G +I+
Sbjct: 460 DHMEVGGFCDIVSCNILIDAFCKVKKVKSALELF---KEMDYKGMQAD-AVTYGTLINGL 515
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
++G + A + ++M + +Y L CK A ++ + + + D+
Sbjct: 516 FSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDI 575
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
Y+ LI + A LF+DMR + ++ ++ GL++ R L
Sbjct: 576 VTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTL 628
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 13/217 (5%)
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
+Y+ L CK++R +A Q+V + G DV Y ++ ++ F A L+ +M
Sbjct: 265 IYIDCL---CKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEM 321
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
+ + + ++ GL +N + E AF L + +E+ +N++I F +AG
Sbjct: 322 VKMGLKPDVVACGALIFGLCKNSKVE--EAFELASRMLSLNIELSVSIYNALISGFWRAG 379
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIK 583
++ A + M EP TY L+N Y T ++ + K+ T G +
Sbjct: 380 SIDKAYTIISFMRTNGCEPGVVTYNILLNHYCT----IGMMEKAENLITKMETSGVNPDR 435
Query: 584 FEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
+ +N L L K D V E+ F D
Sbjct: 436 YSYN---QLLKGLCKTHQLDKAFAFVSDHMEVGGFCD 469
>gi|145524846|ref|XP_001448245.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415789|emb|CAK80848.1| unnamed protein product [Paramecium tetraurelia]
Length = 967
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 107/525 (20%), Positives = 213/525 (40%), Gaps = 67/525 (12%)
Query: 65 QDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKR 124
Q I ++ T + + N D+AWK+F++L S P +LI L + DN +L+
Sbjct: 299 QPTIVTINTMIDQYFKNNQKDKAWKTFENLKLTSTKPDNFTYTTLINGLKN-SDNMDLRL 357
Query: 125 AFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFL 184
AF ++ K D + LL + NA F L+ M +++ E+ L
Sbjct: 358 AFQ--LFEEYKQYNQPDQIIYNCLLDACINAGDLNRGFQLLNEMKQSQSIQLDEITYNTL 415
Query: 185 VDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVI 244
+ C + + +FEE +I + KPN + N+ L+ C ++ A +
Sbjct: 416 IKGCGRKKRLNEAISLFEEMKQIGI-------KPNRISFNSLLDSCV-KCNKMNVAWRYF 467
Query: 245 ETM-SVLGVRPNESSFGFLAYLYALKG-------LQEKIVELESLMNEFGFSSQMVFYSS 296
E M G+ P+ ++ L + +K L I LE + F + Y+S
Sbjct: 468 EEMRKQYGIFPDNFTYSIL--VNGIKTNHSNRDELLRAITLLEQIQETGQFKPDEILYNS 525
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE- 355
LI VK ++ + + + ++E S TY ++K + + ++ G + E
Sbjct: 526 LIDACVKFNEIQKGMQ-LFKEMKNKSIEPSSV---TYGILIKAYGKMNDLNGAFRMFEEM 581
Query: 356 AQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
QK P V +G ++ ACV D+A +++M + + +Y +K +C
Sbjct: 582 KQKKIPIN-----DVTYGCLVDACVRNDRLDQALQFIEQMKSQNLPINTVLYTTIIKGFC 636
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
K ++T EA + FSL + + R Y
Sbjct: 637 KLNQTEEAMKY--------------------------------FSLMK--QNQRTYPNLI 662
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+Y +++ GL++N E+VE ++ +++++ C+ G ++ T++
Sbjct: 663 TYNSLLDGLVKNGLMNQADKLFQELVEST-IKPDLITFSTLLKGHCRRGNMKRLNETVQT 721
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQ 579
M+ Q P++ ++ + +QY + + ++ + + +I Q
Sbjct: 722 MLHYQINPDESLLQLILESCLNQQQYHNGVQIYDQFQHQIPQSTQ 766
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 130/298 (43%), Gaps = 25/298 (8%)
Query: 332 TYCEVVKGFLQNGNVK-GLANLIIEAQKL--EPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY ++ G + N+ LA + E K +P I+ + ++ AC+N G ++
Sbjct: 339 TYTTLINGLKNSDNMDLRLAFQLFEEYKQYNQPDQIIYN-----CLLDACINAGDLNRGF 393
Query: 389 SILDEMNACGCSVGLG--VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
+L+EM S+ L Y +K ++ R EA L ++ G++ + ++++L++
Sbjct: 394 QLLNEMKQSQ-SIQLDEITYNTLIKGCGRKKRLNEAISLFEEMKQIGIKPNRISFNSLLD 452
Query: 447 ASITSQDFQSAFSLFRDMREAR-IYDLKGSYLTIMTGLMENH--RPELMAA--FLDEVVE 501
+ + A+ F +MR+ I+ +Y ++ G+ NH R EL+ A L+++ E
Sbjct: 453 SCVKCNKMNVAWRYFEEMRKQYGIFPDNFTYSILVNGIKTNHSNRDELLRAITLLEQIQE 512
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
+ + +NS+I A K ++ + + M EP+ TY LI Y
Sbjct: 513 TGQFKPDEILYNSLIDACVKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGKMNDLN 572
Query: 562 SVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE--KSQEMKV 617
M+ E+K QK I + A V+ D +Q +E KSQ + +
Sbjct: 573 GAFRMFEEMK-------QKKIPINDVTYGCLVDACVRNDRLDQALQFIEQMKSQNLPI 623
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 203/504 (40%), Gaps = 43/504 (8%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVH 146
A +F +T L P VT + + H ++D + F ++ P ++ F T
Sbjct: 133 ALSTFGKITKLGLHPDV-VTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTT-- 189
Query: 147 TLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD-ICRKNSNFVAF--LKVFEE 203
L+ + A AL+ M ++ P ++ G +VD +C+K A L+ EE
Sbjct: 190 -LMNGLCREGRIVEAVALLDRMMEDG-LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
I PN+ +A ++ C + SDA+ + M G+ P+ ++ +
Sbjct: 248 VSHII---------PNVVIYSAIIDSLCKDGRH-SDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+ G +L M E S +V Y++LI+ +VK G A L G +
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNL 381
+ TY ++ GF + + ++ ++ + P+ I + +I
Sbjct: 358 PNT----ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT-----LIDGYCGA 408
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
D +L EM G Y + + A L+ ++ SSGL D+
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGS------------YLTIMTGLMENHRP 489
D L++ + + A +F+ M++++ DL S Y +++GL+ N
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSK-KDLDASHPFNGVEPDVQTYNILISGLI-NEGK 526
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
L A L E + + T ++S+I CK RL++A + M F PN T+ +
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 550 LINGYVTAEQYFSVLMMWHEIKRK 573
LINGY A + L ++ E+ R+
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRR 610
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 117/295 (39%), Gaps = 23/295 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++G C G + + D +++ M+ G+ + +++ L + + L G ++
Sbjct: 393 PNLITFNTLIDGYC-GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA---------SRTILLCLGGGNMEQSDF 328
L M G +V +L+ G G L+ A S+ L N + D
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLS 384
+TY ++ G + G +EA++L GIV D +I
Sbjct: 512 --QTYNILISGLINEGK-------FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A + D M + S + + + YCK R + +L ++ G+ + Y L
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
I + A +F++M + +Y + ++TGL + A L+++
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A LF DM +R + +M ++ RP+L+ + L + +E ++ + +N
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVIS-LYQKMERKQIRCDIYSFN 118
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+I FC +L A T ++ L P+ T+ +L++G ++ L +H++
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 153/361 (42%), Gaps = 24/361 (6%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKI 275
PN+++ N L G C V +A ++E M + G P+ ++Y + GL +++
Sbjct: 77 PNVFSYNTVLHGFCKA-NRVENALWLLEQMVMRGCPPD-----VVSYTTVINGLCKLDQV 130
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
E +M++ G ++ Y +L+ G+ ++G+L+ A + M + +
Sbjct: 131 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR------KMTERGYRPNA 184
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHS 389
TY ++ G + L E +E SG + I+ + V G D A
Sbjct: 185 ITYNNIMHGLCSGRKLDSALQLFKE---MEESGSCPPDVFTYSTIVDSLVKSGKVDDACR 241
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+++ M + GCS + Y L CK + EAT L+ ++ SG ++ Y+ +I+
Sbjct: 242 LVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHC 301
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
A+ L +M + +Y ++ + + E ++ +VE V
Sbjct: 302 KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP-NL 360
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+NS++ FCK +E A + L MI PN +Y ++I G A + +++ +
Sbjct: 361 FTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQ 420
Query: 570 I 570
+
Sbjct: 421 M 421
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 135/319 (42%), Gaps = 13/319 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V DA +++E M G PN ++ L + G ++ L M G S +V Y++
Sbjct: 236 VDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 295
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK---GLANLI 353
+I G+ KLG ++ A + + GG TY ++ F + G + GL ++
Sbjct: 296 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNV----VTYTVLLDAFCKCGKAEDAIGLVEVM 351
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+E G V + ++ ++A +L M GC + Y +
Sbjct: 352 VE------KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGL 405
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK + E L+ + S+ D+ ++ +I+A + A+ LF ++E+
Sbjct: 406 CKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNL 465
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y +++ GL ++ R + L E+ +N++I CK+ R++ A +
Sbjct: 466 VTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFL 525
Query: 534 RMIFLQFEPNDQTYLSLIN 552
+M+ P+D TY +I+
Sbjct: 526 QMLSDGLAPDDVTYSIVIS 544
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 161/435 (37%), Gaps = 72/435 (16%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PNI N ++G C L + +A ++E M G +PN ++ L + G E +
Sbjct: 288 PNIVTYNTIIDGHCK-LGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 346
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG--------NMEQSDFS 329
L +M E G+ + Y+SL+ + K +E A + + + G N +
Sbjct: 347 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 406
Query: 330 KETYCE----VVKGFLQNGNVKGLA--NLIIEA--------------QKLEPSGIVVDRS 369
K T +++ L N V + N II+A ++ SG +
Sbjct: 407 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 466
Query: 370 VGFGIISACVNLGLSDKAHSILDEMN-ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
++ D+A +L EM GCS + Y + CK R A +L +
Sbjct: 467 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 526
Query: 429 ISSSGLQLDVGNYDALIEA-------------------------SITSQDFQSAFSLFRD 463
+ S GL D Y +I + +IT F +
Sbjct: 527 MLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGN 586
Query: 464 MREA-RIYDL---KGSYLTIMT------GLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ +A I L KGSY ++T L + R L+ ++ V T +N
Sbjct: 587 LDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP-DTVTYN 645
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+++ FC A R EDA M EP++ TY +L+ V + Y +L E+ +
Sbjct: 646 TLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLA---EVSKS 702
Query: 574 ISTDGQKGIKFEHNL 588
+ G K H L
Sbjct: 703 MV---DTGFKLNHEL 714
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 137/302 (45%), Gaps = 13/302 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V A V+ M G RPN +F L Y L G + V L +M G +V Y++
Sbjct: 298 VELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNT 357
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE---TYCEVVKGFLQNGNVKGLANLI 353
L++G GNL A + +C G ME+ F + TY +V GF++ G+++G + +
Sbjct: 358 LLNGLCCSGNLAEA---VDVC---GRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEV- 410
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
K+ G+ + V ++ + D+A+ ++D M GC + + +K
Sbjct: 411 --WNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGL 468
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C R A ++V + G D Y+ L++ + + + A L R++ E ++
Sbjct: 469 CCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNL 528
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y T+M G + + E + L ++ + V+ N +I+A+ K G++ A + L
Sbjct: 529 VTYNTVMYGFSSHGKEEWVLQVLGRMLVNG-VKPDAITVNVVIYAYSKLGKVRTAIQFLD 587
Query: 534 RM 535
R+
Sbjct: 588 RI 589
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 178/447 (39%), Gaps = 56/447 (12%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
++ M + + ++ SF + Y GL ++ +++ + EFG + Y+ L+ +
Sbjct: 95 ILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALL 154
Query: 303 -KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
+ GN + + G ME + F TY ++K +NG + G L++E K
Sbjct: 155 GESGNKFHMIGAVYENMRGEGMEPNVF---TYNVLLKALCKNGKLDGACKLLVEMSK--- 208
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
G V D +++A G ++A + A G + V + C+E R E
Sbjct: 209 RGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGV---VSVCNALICGLCREGRVGE 265
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM--REAR--IYD----LK 473
L+ ++ +G+ +V +Y ++I + + A ++ M R R ++ +K
Sbjct: 266 VFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMK 325
Query: 474 GSYLTIMTG---------LMENHRPELM-----------AAFLDEVVE-------DPRVE 506
G +L G ++E RP ++ + L E V+ D
Sbjct: 326 GYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCR 385
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+++++H F KAG L+ A +M+ PN Y S+++ V + S+
Sbjct: 386 PNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVD--VLCKN--SMFDQ 441
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ 626
+ + ++TDG N F+ L GG M+VV++ Q D Y +
Sbjct: 442 AYRLIDNMATDGCPPTVVTFN---TFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNE 498
Query: 627 ----AFMENHKKLKVAKLRKRNFKKME 649
F N K +R+ +K+E
Sbjct: 499 LLDGLFSVNELKEACELIRELEERKVE 525
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 133/330 (40%), Gaps = 18/330 (5%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
V M G+ P+ +F FL E + +M +V Y+++I GY
Sbjct: 212 VWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYC 271
Query: 303 KLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
K GN + A +ME+ + K TY +++ GN +L Q++E
Sbjct: 272 KAGNTKKAMEKFT------DMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLY---QEME 322
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
G+ + +I G + + S+ + MN GC + +Y + AY K
Sbjct: 323 ERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVN 382
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
EA L + G + D Y ++ S A F ++ + Y +++
Sbjct: 383 EAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLI 442
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL + R + F +E+VE ++ +N++I A K+G++E+A +RM +
Sbjct: 443 DGLGKAGRVDEAEKFFEEMVER-GCPQDSYCYNALIDALAKSGKMEEALVLFKRM---EK 498
Query: 541 EPNDQ---TYLSLINGYVTAEQYFSVLMMW 567
E DQ TY LI+G + L +W
Sbjct: 499 EGCDQTVYTYTILISGLFKEHRNEEALKLW 528
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 157/405 (38%), Gaps = 41/405 (10%)
Query: 182 GFLVDICRKNSNFVAF--LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD 239
GFL+ + NS +F L + EE + ++P++Y N L G + +
Sbjct: 185 GFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSM-FIES 243
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AE+V E M + P+ S+ + Y G +K +E + M + + Y +LI
Sbjct: 244 AERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQ 303
Query: 300 GYVKLGNLES------------------ASRTIL--LCLGGGNMEQSDFSKE-------- 331
GN +S A ++ LC G +E S +
Sbjct: 304 ACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKA 363
Query: 332 ---TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII-SACVNLGLSDKA 387
Y ++ + +NGNV NL ++++ G D V +G+I + G D+A
Sbjct: 364 NVAIYTALIDAYGKNGNVNEAINLF---ERMKGEGFEPD-DVTYGVIVNGLCKSGRLDEA 419
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ +V Y + K R EA + ++ G D Y+ALI+A
Sbjct: 420 VEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDA 479
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
S + A LF+ M + +Y +++GL + HR E D ++ D +
Sbjct: 480 LAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMI-DKGITP 538
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
T + ++ C +G++ A + L + + P + + +IN
Sbjct: 539 TTASFRALSVGLCLSGKVARACKILDELAPMGVIP-ETAFEDMIN 582
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAF 519
++R M+E+ I ++ ++ GL+ + E A + EV+E ++ +N++I +
Sbjct: 212 VWRRMKESGIEPSLYTFNFLLNGLVNSMFIE-SAERVFEVMECGKIGPDVVSYNTMIKGY 270
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQ 579
CKAG + A M EP+ TYL+LI + + S L ++ E++ +
Sbjct: 271 CKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEME-------E 323
Query: 580 KGIKFEHNLVDAFLYALVKGGF 601
+G++ + Y+LV GG
Sbjct: 324 RGLE-----IPPHAYSLVIGGL 340
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 149/385 (38%), Gaps = 32/385 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M+P + + ++G + + DA V++ M+ G PN + L + G K
Sbjct: 315 MEPTLITYSILVKGLTRA-KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 373
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG-GGNMEQSDFSKETYC 334
+E++ LM G S Y++LI GY K G ++A R + L G N+ Q F+ C
Sbjct: 374 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT-SVIC 432
Query: 335 EVVK----------------------GFLQNGNVKGLANLIIEAQKLE------PSGIVV 366
+ G L + GL ++ LE G VV
Sbjct: 433 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 492
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D ++ G D+A I E+ GC + Y + C + + EA +
Sbjct: 493 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 552
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
++ GL+ D Y LI + A + D + + +Y ++ G +
Sbjct: 553 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 612
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
R E F DE++ V+ T +N +I A+C++GRL A M PN T
Sbjct: 613 ERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 671
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIK 571
Y SLI G + +++ E++
Sbjct: 672 YTSLIKGMSIISRVEEAKLLFEEMR 696
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 158/382 (41%), Gaps = 54/382 (14%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
F++CC A D + P++Y A+ C G V +A K+ M GV PN +F
Sbjct: 231 FQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKG-GKVEEAVKLFSKMEEAGVAPNVVTFN 288
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
+ + G ++ + M E G ++ YS L+ G L A R +G
Sbjct: 289 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG------LTRAKR-----IGD 337
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
+ +K KGF P ++V + +I + +
Sbjct: 338 AYFVLKEMTK-------KGF--------------------PPNVIVYNN----LIDSFIE 366
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G +KA I D M + G S+ Y +K YCK + A +L+ ++ S G ++ G+
Sbjct: 367 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 426
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP----ELMAAFL 496
+ ++I + F SA +M + G T+++GL ++ + EL FL
Sbjct: 427 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 486
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
++ V T N+++H C+AG+L++A R + ++ + +Y +LI+G
Sbjct: 487 NK-----GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 541
Query: 557 AEQYFSVLMMWHE-IKRKISTD 577
++ M E +KR + D
Sbjct: 542 KKKLDEAFMFLDEMVKRGLKPD 563
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 86/232 (37%), Gaps = 44/232 (18%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I C +++ DEM + VY ++AYC+ R + A +L D+ G
Sbjct: 605 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 664
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ + Y +LI+ + A LF +MR M GL
Sbjct: 665 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMR--------------MEGL---------- 700
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+P V + ++I + K G++ + LR M PN TY +I G
Sbjct: 701 --------EPNV----FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 748
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVK-GGFFDA 604
Y + +E++ +KGI + F+Y +K GG +A
Sbjct: 749 YARDGNVTEASRLLNEMR-------EKGIVPDSITYKEFIYGYLKQGGVLEA 793
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 142/346 (41%), Gaps = 24/346 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF----GFLAYLYALKGL 271
+KP+I N+ ++G C L + DA ++I + G P++ S+ GFL
Sbjct: 301 IKPDIVTYNSLIKGYC-DLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCK------- 352
Query: 272 QEKIVELESLMNEFGFSSQM----VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
++KI E++ LM + ++S + V Y++LI K G+ + A L L +
Sbjct: 353 EKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDA----LAFLKEAQDKGFH 408
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
K Y +V F Q G + +L+I+ + G D I+ LG D+A
Sbjct: 409 IDKVGYSAIVHSFCQKGRMDEAKSLVID---MYSRGCNPDVVTYTAIVDGFCRLGRIDEA 465
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
IL +M GC Y L C ++ EA +++ + Y A++
Sbjct: 466 KKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHG 525
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
A L R+M E + ++ L +N + +L+E + + +
Sbjct: 526 LRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECL-NKGCAI 584
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
++ ++IH FC+ G +E A L M P+ TY +L +
Sbjct: 585 NVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDA 630
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 126/311 (40%), Gaps = 15/311 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ +A +V+ M GV P+ S Y+ G EK ++ M G +V Y+S
Sbjct: 251 LRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNS 310
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL----QNGNVKGLANL 352
LI GY L +E A L + G + K +Y V+ GFL + VK L
Sbjct: 311 LIKGYCDLNRIEDA----LELIAGLPSKGCPPDKVSYYTVM-GFLCKEKKIEEVKCLMEK 365
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
++ L P + + +I G +D A + L E G + Y + +
Sbjct: 366 MVWNSNLIPDQVTYNT-----LIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHS 420
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
+C++ R EA LV+D+ S G DV Y A+++ A + + M +
Sbjct: 421 FCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPN 480
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
SY ++ GL + + L A + V E+ + +++H + G+L +A
Sbjct: 481 TVSYTALLNGLCHSGK-SLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLT 539
Query: 533 RRMIFLQFEPN 543
R M+ F P
Sbjct: 540 REMVEKGFFPT 550
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 118/272 (43%), Gaps = 9/272 (3%)
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN 343
++ +S V Y +++ K + A R + L G + E + V+ + +
Sbjct: 193 QWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRG----IECPPEAFGYVMVSYSRA 248
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
G ++ ++ QK +G+ S+ I V G +KA L+ M G +
Sbjct: 249 GKLRNALRVLTLMQK---AGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDI 305
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y +K YC +R +A +L+ + S G D +Y ++ + + L
Sbjct: 306 VTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEK 365
Query: 464 MR-EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKA 522
M + + + +Y T++ L ++ + AFL E +D + +++I+H+FC+
Sbjct: 366 MVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEA-QDKGFHIDKVGYSAIVHSFCQK 424
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
GR+++AK + M P+ TY ++++G+
Sbjct: 425 GRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGF 456
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 121/316 (38%), Gaps = 46/316 (14%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A +V+ M+ G+ +FG++ Y+ G + + +LM + G + ++ I
Sbjct: 219 ARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIY 278
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
VK G LE A + FL+ V G+ I+ L
Sbjct: 279 VLVKGGKLEKALK---------------------------FLERMQVTGIKPDIVTYNSL 311
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
I +L + A ++ + + GC Y + CKE +
Sbjct: 312 ---------------IKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKI 356
Query: 420 AEATQLVMD-ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
E L+ + +S L D Y+ LI A + ++ ++ + K Y
Sbjct: 357 EEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSA 416
Query: 479 IMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
I+ + R E + +D +V T + +I+ FC+ GR+++AK+ L++M
Sbjct: 417 IVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVT--YTAIVDGFCRLGRIDEAKKILQQMYK 474
Query: 538 LQFEPNDQTYLSLING 553
+PN +Y +L+NG
Sbjct: 475 HGCKPNTVSYTALLNG 490
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 134/338 (39%), Gaps = 46/338 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ A ++G C L + +A+K+++ M G +PN S+ L G + E
Sbjct: 444 PDVVTYTAIVDGFCR-LGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEARE 502
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ ++ E ++ + Y +++ G + G L E D ++E V
Sbjct: 503 MINVSEEHWWTPNAITYGAVMHGLRREGKLS---------------EACDLTREM---VE 544
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
KGF P+ + + I S C N + + A L+E
Sbjct: 545 KGFF-------------------PTPV----EINLLIQSLCQNQKVVE-AKKYLEECLNK 580
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC++ + + + +C+ A ++ D+ SG D Y AL +A A
Sbjct: 581 GCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEA 640
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
L M + +Y +++ + R + M L+++++ R +T +N +I
Sbjct: 641 AELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLK--RQPFRT-VYNQVIE 697
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
C G LE+A++ L +++ + + T L+ Y+
Sbjct: 698 KLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYL 735
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 141/306 (46%), Gaps = 23/306 (7%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T +T++ A A AL+K M R P E+ L+D ++ N A KVFEE
Sbjct: 266 TYNTIIDGYCKAGKMFKADALLKEMVAKR-IHPNEITFNILIDGFCRDENVTAAKKVFEE 324
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
R L +PN+ N+ + G C + +A + + MS +G++PN ++ L
Sbjct: 325 MQRQGL-------QPNVVTYNSLINGLCSN-GKLDEALGLQDKMSGMGLKPNVVTYNALI 376
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--SRTILLCLGGG 321
+ K + ++ E+ + + G + ++ +++LI Y K G ++ A R+++L G
Sbjct: 377 NGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC 436
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
+ TY ++ GF + GNVK L A+++E +G+ D ++ A
Sbjct: 437 P------NVSTYNCLIVGFCREGNVKEARKL---AKEMEGNGLKADLVTYNILVDALCKK 487
Query: 382 GLSDKAHSILDEMNAC---GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
G + KA +LDEM G + Y +K +C + + EA +L+ ++ GL +
Sbjct: 488 GETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNR 547
Query: 439 GNYDAL 444
YD L
Sbjct: 548 TTYDIL 553
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 128/306 (41%), Gaps = 50/306 (16%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M +GFS ++ Y+++I GY K G + A +L + + ++ T+ ++ GF
Sbjct: 255 MKAWGFSPSVITYNTIIDGYCKAGKMFKAD-ALLKEMVAKRIHPNEI---TFNILIDGFC 310
Query: 342 QNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
++ NV + E Q+ L+P+ + + +I+ + G D+A + D+M+ G
Sbjct: 311 RDENVTAAKKVFEEMQRQGLQPNVVTYN-----SLINGLCSNGKLDEALGLQDKMSGMGL 365
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
+ Y + +CK+ EA +++ DI GL +V ++ LI+A + AF
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF- 424
Query: 460 LFRDM--------------------------REAR--IYDLKG--------SYLTIMTGL 483
L R M +EAR +++G +Y ++ L
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484
Query: 484 MENHRPELMAAFLDE--VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
+ LDE ++E +N +I FC G+LE+A R L M+
Sbjct: 485 CKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLI 544
Query: 542 PNDQTY 547
PN TY
Sbjct: 545 PNRTTY 550
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 10/192 (5%)
Query: 364 IVVDRSVGFGIISACVNLGLS--DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
I+VD V + + ++L L D+A ++A C+ P L + KE R
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCN-------PMLVSLVKEGRIGV 212
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
+ ++ + ++V +D +I FQ A + DM+ +Y TI+
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
G + + A L E+V R+ +N +I FC+ + AK+ M +
Sbjct: 273 GYCKAGKMFKADALLKEMVAK-RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331
Query: 542 PNDQTYLSLING 553
PN TY SLING
Sbjct: 332 PNVVTYNSLING 343
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 153/355 (43%), Gaps = 16/355 (4%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++Y + + G C G ++ A +V + M+ GV P+ + + Y G E+ +EL
Sbjct: 264 DLYTYSTLIHGLC-GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLEL 322
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEV 336
+M + G + +V Y+ LI G + ++ A L + + D + TY +
Sbjct: 323 WKVMEKEGCRT-VVSYNILIRGLFENAKVDEAISIWEL------LPEKDCCADSMTYGVL 375
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V G +NG + +++ EA+ +D +I+ G D+ +LD+M
Sbjct: 376 VHGLCKNGYLNKALSILEEAENGRGD---LDTFAYSSMINGLCREGRLDEVAGVLDQMTK 432
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
GC V + + + + +A + ++ S G V Y+ LI ++ F
Sbjct: 433 HGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSE 492
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKTHDWNSI 515
A++L ++M + +Y +M GL + + ++ + +E + +VK H N I
Sbjct: 493 AYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH--NII 550
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
IH C +G++EDA + M PN T+ +L+ G+ + +W I
Sbjct: 551 IHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 605
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 155/390 (39%), Gaps = 38/390 (9%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ N ++ C Q A++++ M G P+ S+G L A G
Sbjct: 120 LSPNLQTYNILIKISCRKKQ-FDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDA 178
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN------------- 322
++L M E G + + Y+ LI G+ K G++ +AS L G +
Sbjct: 179 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 238
Query: 323 -----------------MEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
M++++ ++ TY ++ G +GN+ G + E + +G
Sbjct: 239 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKE---MAENG 295
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+ D V +++ + G ++ + M GC + Y ++ + + EA
Sbjct: 296 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRGLFENAKVDEAI 354
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+ + D Y L+ + A S+ + R +Y +++ GL
Sbjct: 355 SIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGL 414
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
R + +A LD++ + + + N++I+ F +A +LEDA R M+ P
Sbjct: 415 CREGRLDEVAGVLDQMTKH-GCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 473
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
TY +LING AE++ + E+ +K
Sbjct: 474 VVTYNTLINGLSKAERFSEAYALVKEMLQK 503
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/407 (19%), Positives = 160/407 (39%), Gaps = 72/407 (17%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG-VRPNESSFGFLAYLYALKGL----- 271
PNI + N + G C K E+ + ++ NE Y + GL
Sbjct: 228 PNIPSYNVMINGLC-------KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 280
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
+ + M E G S +V Y+++++GY++ G +E CL + + + +
Sbjct: 281 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEE-------CLELWKVMEKEGCRT 333
Query: 332 --TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII--SACVNLGLSDKA 387
+Y +++G +N V + I +L P S+ +G++ C N G +KA
Sbjct: 334 VVSYNILIRGLFENAKV----DEAISIWELLPEKDCCADSMTYGVLVHGLCKN-GYLNKA 388
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
SIL+E + Y + C+E R E ++ ++ G + + +A+I
Sbjct: 389 LSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVING 448
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ + + A F +M KG + T++T
Sbjct: 449 FVRASKLEDALRFFGNMVS------KGCFPTVVT-------------------------- 476
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N++I+ KA R +A ++ M+ ++PN TY L+NG ++ L +W
Sbjct: 477 ----YNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLW 532
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+ +KG K + + + ++ L G + +Q+ + ++
Sbjct: 533 CQAL-------EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQ 572
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 71/169 (42%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A S G S L Y +K C++ + +A +L+ + G DV +Y L
Sbjct: 106 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTL 165
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I + + A LF +M E + Y ++ G + + + +++ P
Sbjct: 166 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 225
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
V +N +I+ CK G+ +++ RM + + TY +LI+G
Sbjct: 226 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHG 274
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 94/243 (38%), Gaps = 18/243 (7%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ--EK 274
KPN Y CNA + G + DA + M G P ++ L + GL E+
Sbjct: 436 KPNPYVCNAVINGFVRA-SKLEDALRFFGNMVSKGCFPTVVTYNTL-----INGLSKAER 489
Query: 275 IVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
E +L+ E G+ M+ YS L++G + L+ A L C + D
Sbjct: 490 FSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALN--LWCQALEKGFKPDVKMH 547
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ G +G V+ L E ++ +V + ++ + ++A I
Sbjct: 548 NI--IIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNT---LMEGFYKVRDFERASKIW 602
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
D + G + Y TLK C HR ++A + D G+ ++ L++ +
Sbjct: 603 DHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLAL 662
Query: 452 QDF 454
+ +
Sbjct: 663 KGY 665
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 156/350 (44%), Gaps = 33/350 (9%)
Query: 234 LQSVSDAEKVIETMSVL-GVR--PNESSFGFLAYLYALKGLQEKIVEL-ESLMNEFGFSS 289
L S+ A + + M++ G++ P+ + L + L +K +EL + F
Sbjct: 45 LASLCQAGTMDQAMAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVP 104
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
+ Y+++I Y K+ L+ A + L + SD T V +GF + V
Sbjct: 105 EATTYTAIIKCYCKMDRLDQARQL----LEESSCCSSDVIAIT--SVARGFCKAQRVDEA 158
Query: 350 ANLI---IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
L+ +E + +P IV + G A G +A+ +L+ + + GC Y
Sbjct: 159 YQLLLDMVEKKSAKPD-IVAWNVIIHGFCKA----GRVREAYEMLETLVSMGCVPNAVTY 213
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSG--LQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
+ +CK +EA QL +SS + +V ++ALI + + AF L + M
Sbjct: 214 TTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQM 273
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCK 521
+ + +Y T+M GL + R ++ +E++ + P V + +++HA CK
Sbjct: 274 KARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVT----YTTLVHAHCK 329
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLI-----NGYV-TAEQYFSVLM 565
AG L+DA++ +R M+ P+ TY L+ NG V TA ++F ++
Sbjct: 330 AGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKIL 379
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 102/254 (40%), Gaps = 47/254 (18%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGV-YVPTLKAYCKEHRTAEATQLVMDISSS 432
+I+ L L DKA + EM V Y +K YCK R +A QL+ + SS
Sbjct: 76 LINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SS 133
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
DV ++ +Q A+ L DM E + + +P+++
Sbjct: 134 CCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKK-----------------SAKPDIV 176
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
A WN IIH FCKAGR+ +A L ++ + PN TY +LI+
Sbjct: 177 A------------------WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218
Query: 553 GYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV--DAFLYALVKGGFFDAVMQVVE 610
G+ + L ++ + S D E N+V +A + L K + ++V+
Sbjct: 219 GFCKSGNLSEALQLFKVLS---SRDHHA----EPNVVTFNALISGLCKADRLEHAFELVK 271
Query: 611 KSQEMKVFVDKWKY 624
+ + + D + Y
Sbjct: 272 QMKARDLRADTFTY 285
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 110/260 (42%), Gaps = 14/260 (5%)
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
+V ++ +I G+ K G + A + + G + + TY ++ GF ++GN+
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNA----VTYTTLIDGFCKSGNLSEAL 230
Query: 351 NL--IIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
L ++ ++ EP+ + + +IS + A ++ +M A Y
Sbjct: 231 QLFKVLSSRDHHAEPNVVTFN-----ALISGLCKADRLEHAFELVKQMKARDLRADTFTY 285
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ CK+ RT+E +++ ++ G V Y L+ A + Q A + R M
Sbjct: 286 TTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVA 345
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
I +Y ++ GL EN + F ++++ + R +++++ CKA ++
Sbjct: 346 KGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRE-RCPPCAVVYSALVRGCCKAALVD 404
Query: 527 DAKRTLRRMIFLQFEPNDQT 546
+A + M+ + P+ T
Sbjct: 405 EAVKYYVEMLDRRLAPDPAT 424
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 90/213 (42%), Gaps = 4/213 (1%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
+V + + II + D+A +L+E + C S + + +CK R EA
Sbjct: 101 ALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCC--SSDVIAITSVARGFCKAQRVDEA 158
Query: 423 TQLVMD-ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
QL++D + + D+ ++ +I + + A+ + + +Y T++
Sbjct: 159 YQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218
Query: 482 GLMEN-HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
G ++ + E + F D E +N++I CKA RLE A +++M
Sbjct: 219 GFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDL 278
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ TY +L++G + V ++ E+ R+
Sbjct: 279 RADTFTYTTLMDGLCKQGRTSEVSRVFEEMLRE 311
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/476 (19%), Positives = 191/476 (40%), Gaps = 34/476 (7%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
+EA + F + +FP N L+ + L ++KR F ++ + P + T
Sbjct: 77 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGAR-PTVF---T 132
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD----ICRKNSNFVAFLKV 200
+ ++ M A L + M K R +P + ++D + R + F ++
Sbjct: 133 YNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 191
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSF 259
+ CC +P++ NA + C +G + + M G++PN S+
Sbjct: 192 KDMCC-----------EPDVITYNALINCFCKFGKLPI--GLEFYREMKGNGLKPNVVSY 238
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
L + +G+ ++ ++ M G Y+SLI K+GNL A R
Sbjct: 239 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL------ 292
Query: 320 GGNMEQS--DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
G M Q +++ TY ++ G +K L K++ +G++ + + +I
Sbjct: 293 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF---GKMDTAGVIPNLASYNALIHG 349
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
V D+A +L+E+ G L +Y + C + A ++ ++ G++ +
Sbjct: 350 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 409
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
Y L++A S + L +M+E I ++ ++ GL +N + +
Sbjct: 410 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 469
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ D ++ + ++I CK ++E A +M+ P+ Y SL++G
Sbjct: 470 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 525
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 152/371 (40%), Gaps = 20/371 (5%)
Query: 258 SFGFLAYLYALK---GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
FG L+++ G+ E+ ++ S M F + + L+ + KLG + R
Sbjct: 59 GFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF 118
Query: 315 LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
+G G + F TY ++ + G+V+ L ++++ G+V D +
Sbjct: 119 KDMIGAG-ARPTVF---TYNIMIDCMCKEGDVEAARGLF---EEMKFRGLVPDTVTYNSM 171
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
I +G D +EM C + Y + +CK + + ++ +GL
Sbjct: 172 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 231
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+ +V +Y L++A Q A + DMR + + +Y +++ L A
Sbjct: 232 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA--NCKIGNLSDA 289
Query: 495 F-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
F L + VE + ++I C A R+++A+ +M PN +Y +LI+G
Sbjct: 290 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 349
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
+V A+ L + +E+K +GIK + L F++ L +A V+ + +
Sbjct: 350 FVKAKNMDRALELLNELK-------GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 402
Query: 614 EMKVFVDKWKY 624
E + + Y
Sbjct: 403 ECGIKANSLIY 413
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 111/521 (21%), Positives = 204/521 (39%), Gaps = 79/521 (15%)
Query: 69 TSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNL-----K 123
+S+ T H + N+ +A+ F L + P N ++ L + H + +
Sbjct: 45 SSISTTFHNN---NDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQ 101
Query: 124 RAFASVVYVIEKNPKLLDFQTVHTLLGSMRNA---NTAAPAFALVKCMFKNRYFMPFELW 180
F + NP L FQ H L+G N T L + + F +
Sbjct: 102 MEFEGI------NPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVA 155
Query: 181 GGFLVDICRKNSNFVAFLKVFEECCRIALDENLD--FMKPNIYACNAALEGCCYGLQSVS 238
GF +D + KV E + L +D ++PN+ + ++G C + V+
Sbjct: 156 MGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKD-KHVN 214
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
DA + M G+ PN +V YS+LI
Sbjct: 215 DAFDLYSEMVSKGISPN-----------------------------------VVTYSALI 239
Query: 299 SGYVKLGNLESA----SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL-- 352
SG+ +G L+ A ++ IL E T+ +V GF ++G +K +
Sbjct: 240 SGFFTVGQLKDAIDLFNKMIL--------ENIKPDVYTFNILVDGFCKDGKMKEGKTVFA 291
Query: 353 IIEAQKLEPSGIVVDRSV--GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
++ Q ++P+ +V S+ G+ ++ +KA SIL M+ G + + Y +
Sbjct: 292 MMMKQGIKPN-VVTYCSLMDGYCLVKEV------NKAKSILYTMSQRGVNPDIQSYNILI 344
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
+CK + EA L ++ + DV Y++LI+ A L +M + +
Sbjct: 345 DGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP 404
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+Y +I+ L +NH+ + A L + ++D + + + +I CK GRLEDA
Sbjct: 405 PDIITYSSILDALCKNHQVDKAIALLTK-LKDQGIRPNMYTYTILIDGLCKGGRLEDAHN 463
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
++ + TY +I+G+ + L + ++K
Sbjct: 464 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMK 504
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 165/436 (37%), Gaps = 61/436 (13%)
Query: 249 VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLE 308
++G PN +F L LKG + + + GF V Y +LI G K+G E
Sbjct: 120 LMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVG--E 177
Query: 309 SASRTILLCLGGGNMEQS----------------------DFSKE-----------TYCE 335
+ + LL GN+ Q D E TY
Sbjct: 178 TRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSA 237
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHS 389
++ GF G +K +L + + ++P I+VD GF C + G + +
Sbjct: 238 LISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVD---GF-----CKD-GKMKEGKT 288
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ M G + Y + YC +A ++ +S G+ D+ +Y+ LI+
Sbjct: 289 VFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFC 348
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
+ A +LF++M I +Y +++ GL + + +DE + D V
Sbjct: 349 KIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDE-MHDRGVPPDI 407
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
++SI+ A CK +++ A L ++ PN TY LI+G + L H
Sbjct: 408 ITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGR----LEDAHN 463
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYK---Q 626
I + KG N ++ G FD + ++ K ++ D Y+ +
Sbjct: 464 IFEDLLV---KGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIR 520
Query: 627 AFMENHKKLKVAKLRK 642
+ + + K KLR+
Sbjct: 521 SLFDKDENDKAEKLRE 536
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 100/256 (39%), Gaps = 12/256 (4%)
Query: 213 LDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
L+ +KP++Y N ++G C + + + V M G++PN ++ L Y L
Sbjct: 260 LENIKPDVYTFNILVDGFCKD-GKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEV 318
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
K + M++ G + + Y+ LI G+ K+ ++ A M +
Sbjct: 319 NKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLF------KEMHHKHIIPDV 372
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY ++ G + G + L+ E + G+ D I+ A DKA ++
Sbjct: 373 VTYNSLIDGLCKLGKISYALKLVDE---MHDRGVPPDIITYSSILDALCKNHQVDKAIAL 429
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L ++ G + Y + CK R +A + D+ G + V Y +I
Sbjct: 430 LTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCN 489
Query: 451 SQDFQSAFSLFRDMRE 466
F A +L M++
Sbjct: 490 KGLFDEALALLSKMKD 505
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 191/462 (41%), Gaps = 83/462 (17%)
Query: 110 IAHLSSLQDNHNLKRAFASVVYVIEK------NPKLLDFQTVHTLLGSMRNANTAAPAFA 163
I LSSL + + + + V ++++ P + F +TL+ + N A+ A A
Sbjct: 765 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF---NTLIHGLFLHNKASEAMA 821
Query: 164 LVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAF--LKVFEECCRIALDENLDFMKPNIY 221
L+ M +G + +C++ +AF L E+ ++P +
Sbjct: 822 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ----------GKLEPGVL 871
Query: 222 ACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESL 281
N ++G C + + DA + + M G+RPN
Sbjct: 872 IYNTIIDGLC-KYKHMDDALNLFKEMETKGIRPN-------------------------- 904
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKG 339
+V YSSLIS G ASR + +M + + + T+ ++
Sbjct: 905 ---------VVTYSSLISCLCNYGRWSDASRLL------SDMIERKINPDVFTFSALIDA 949
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA-------CVNLGLSDKAHSILD 392
F++ G ++EA+KL +V RS+ I++ C++ L D+A + +
Sbjct: 950 FVKEGK-------LVEAEKLYDE--MVKRSIDPSIVTYSSLINGFCMHDRL-DEAKQMFE 999
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M + C + Y +K +CK R E ++ ++S GL + Y+ LI+ +
Sbjct: 1000 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 1059
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
D A +F++M + +Y T++ GL +N + E A + E ++ ++E + +
Sbjct: 1060 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE-KAMVVFEYLQRSKMEPTIYTY 1118
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
N +I CKAG++ED + +P+ Y ++I+G+
Sbjct: 1119 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 1160
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 146/375 (38%), Gaps = 42/375 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PNI ++ L G C+ + +S+A +++ M V G +PN +F L + L + +
Sbjct: 762 EPNIVTLSSLLNGYCHS-KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 820
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
L M G +V Y +++G K G+ + A + MEQ Y
Sbjct: 821 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL------NKMEQGKLEPGVLIYN 874
Query: 335 EVVKGFLQNGNVKGLANLI--IEAQKLEPSGI------------------------VVDR 368
++ G + ++ NL +E + + P+ + +++R
Sbjct: 875 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 934
Query: 369 SVG------FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
+ +I A V G +A + DEM + Y + +C R EA
Sbjct: 935 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 994
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
Q+ + S DV Y+ LI+ + + +FR+M + + +Y ++ G
Sbjct: 995 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 1054
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
L + ++ E+V D V +N+++ CK G+LE A + + EP
Sbjct: 1055 LFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 1113
Query: 543 NDQTYLSLINGYVTA 557
TY +I G A
Sbjct: 1114 TIYTYNIMIEGMCKA 1128
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 154/364 (42%), Gaps = 23/364 (6%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEK 274
+P+ + + G C VSDA +++ M +G +P+ +AY + L ++
Sbjct: 255 EPDRVTIGSLVNGFCR-RNRVSDAVSLVDKMVEIGYKPD-----IVAYNAIIDSLCKTKR 308
Query: 275 IVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
+ + E G +V Y++L++G A+R + +M + +
Sbjct: 309 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL------SDMIKKKITPN 362
Query: 332 --TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
TY ++ F++NG V L E ++ +V S +I+ D+A+
Sbjct: 363 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS---SLINGLCLHDRIDEANQ 419
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ D M + GC + Y + +CK R + +L ++S GL + Y+ LI+
Sbjct: 420 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 479
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
+ D A F M I +Y ++ GL +N E A + E ++ +++
Sbjct: 480 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE-KALVIFEDMQKREMDLDI 538
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+ ++I CK G++E+A + +P+ TY ++++G T V ++ +
Sbjct: 539 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 598
Query: 570 IKRK 573
+K++
Sbjct: 599 MKQE 602
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A SIL +M G + +C+ +R ++A LV + G + D+ Y+A+I+
Sbjct: 242 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 301
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ ++ AF F+++ I +Y ++ GL + R A L ++++ ++
Sbjct: 302 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK-KKIT 360
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+++++ AF K G++ +AK M+ + +P+ TY SLING
Sbjct: 361 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 153/368 (41%), Gaps = 23/368 (6%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
E M LG+ N ++ L + + + + M + G+ +V SSL++GY
Sbjct: 719 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 778
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKETYCEVVKG-FLQNGNVKGLANLIIEAQKLEPSG 363
+ A + G + T+ ++ G FL N + +A + ++ G
Sbjct: 779 KRISEAVALVDQMFVTGYQPNT----VTFNTLIHGLFLHNKASEAMALI----DRMVAKG 830
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
D +++ G +D A ++L++M G+ +Y + CK +A
Sbjct: 831 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 890
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
L ++ + G++ +V Y +LI + A L DM E +I ++ ++
Sbjct: 891 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 950
Query: 484 MENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
++ + DE+V+ DP + ++S+I+ FC RL++AK+ M+
Sbjct: 951 VKEGKLVEAEKLYDEMVKRSIDPSIVT----YSSLINGFCMHDRLDEAKQMFEFMVSKHC 1006
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
P+ TY +LI G+ ++ + E+ R++S G G +N++ + L + G
Sbjct: 1007 FPDVVTYNTLIKGFCKYKRVEEGM----EVFREMSQRGLVGNTVTYNIL---IQGLFQAG 1059
Query: 601 FFDAVMQV 608
D ++
Sbjct: 1060 DCDMAQEI 1067
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 194/472 (41%), Gaps = 55/472 (11%)
Query: 133 IEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNS 192
IE+ + T L+ + N++ + A L+ M K + P + L+D KN
Sbjct: 319 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK-ITPNVITYSALLDAFVKNG 377
Query: 193 NFVAFLKVFEECCRIALDENL-----------------------DFMK-----PNIYACN 224
+ ++FEE R+++D ++ D M ++ + N
Sbjct: 378 KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYN 437
Query: 225 AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE 284
+ G C + V D K+ MS G+ N ++ L + G +K E S M+
Sbjct: 438 TLINGFCKA-KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 496
Query: 285 FGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNG 344
FG S + Y+ L+ G G LE A L+ + D TY V++G + G
Sbjct: 497 FGISPDIWTYNILLGGLCDNGELEKA----LVIFEDMQKREMDLDIVTYTTVIRGMCKTG 552
Query: 345 NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG-----C 399
V+ +L L G+ D ++S GL + ++ +M G C
Sbjct: 553 KVEEAWSLFCS---LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 609
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISS-------SGLQLDVG--NYD---ALIEA 447
++ G + + K A L+ DI S S L+ G +YD L
Sbjct: 610 TLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRN 669
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
++ A +LF +M ++R + + +++ + + ++ +++ + L E +++ +
Sbjct: 670 GLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVIS-LGEQMQNLGIPH 728
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ ++ +I+ FC+ +L A L +M+ L +EPN T SL+NGY +++
Sbjct: 729 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 780
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 92/232 (39%), Gaps = 17/232 (7%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
DEA + F+ + + FP N+LI KR + E + + L T
Sbjct: 992 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFC------KYKRVEEGMEVFREMSQRGLVGNT 1045
Query: 145 V--HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE 202
V + L+ + A A + K M + + L +C KN + VFE
Sbjct: 1046 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC-KNGKLEKAMVVFE 1104
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
R M+P IY N +EG C V D + +S+ GV+P+ ++ +
Sbjct: 1105 YLQRSK-------MEPTIYTYNIMIEGMCKA-GKVEDGWDLFCNLSLKGVKPDVVAYNTM 1156
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
+ KG +E+ L M E G Y++LI ++ G+ E+++ I
Sbjct: 1157 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 1208
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 146/354 (41%), Gaps = 14/354 (3%)
Query: 205 CRIALDENLDFM-----KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
C+I + + L ++ +P+I N + G C V +AE+++E G+ PN+ S+
Sbjct: 325 CKIEVGKTLRWITENGCEPDITTYNTLISGSCRD-GKVHEAEELLEHAIKRGLSPNKLSY 383
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
L ++Y +G + +L M E G +V Y +L+ G V G ++ A +
Sbjct: 384 TPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVE 443
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
G + ++ Y ++ G + G + L++E + + +D V ++ +
Sbjct: 444 RGVLPDAN----VYNVLMNGLCKKGRLSAAKLLLVE---MLHQNLSLDAFVSATLVDGFI 496
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
G D+A + + A G G+ Y +K YCK +A V + D
Sbjct: 497 RHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEF 556
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y +I+ + D +A LF M + + +Y +++ G +E
Sbjct: 557 TYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEE- 615
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ ++ + +I FCK G++ A M+ + PND T+ LING
Sbjct: 616 MRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLING 669
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 168/429 (39%), Gaps = 85/429 (19%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKI 275
P++ ACNA L + V A KV E M + + + ++GL + K+
Sbjct: 168 PDVIACNALLNALIQQ-KKVEIARKVYEEMV-----KRDGCWDNYSVCIMVRGLCKERKV 221
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SK 330
E L+N+ G +VFY++L+ GY K G++E A+ ++ F +
Sbjct: 222 EEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLF------KELKMKGFLPTT 275
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQK------LEPSGIVVDRSVGFG----------- 373
ETY ++ G + N K + L++E ++ ++ +VD + G
Sbjct: 276 ETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRW 335
Query: 374 ---------------IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+IS G +A +L+ G S Y P + YCK+ +
Sbjct: 336 ITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGK 395
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
A L + ++ G LD+ Y AL+ + + + A ++ M E + Y
Sbjct: 396 CLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNV 455
Query: 479 IMTGLMEN--------------HRPELMAAFLDEVVEDPRVEVKTHD------------- 511
+M GL + H+ + AF+ + D + D
Sbjct: 456 LMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKG 515
Query: 512 -------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+N++I +CK G + DA ++RM P++ TY ++I+GYV + L
Sbjct: 516 MDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNAL 575
Query: 565 MMWHEIKRK 573
++ ++ ++
Sbjct: 576 KLFGQMVKQ 584
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 187/486 (38%), Gaps = 69/486 (14%)
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
F ++ L +R+ A +AL++ R P + G LV+ K L+V
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVR---PDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETM--SVLGVRPNESSF 259
+ R LD ++P++ N ++G C V +A +E SV G PN ++
Sbjct: 196 DGMSRQDLD-----IRPDVVTLNTVVDGLCKS-GRVQEALAFVEQRMSSVHGCPPNTVTY 249
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-----SRTI 314
L + G EL M G +V ++++ G + G +A +
Sbjct: 250 NCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT 309
Query: 315 LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
+ G GN TY +V L NV G+A + + E G D + F +
Sbjct: 310 VWPEGKGN-------AVTYSTLVGALLHTNNV-GMAMELFHEKMSE--GHSPDAIMYFTM 359
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
IS G + A S+ M G + Y + +C++ R EA +L+ ++ G+
Sbjct: 360 ISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI 419
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+ DV Y+ L+ S + DF + L M + G +++T
Sbjct: 420 RPDVCTYNTLLSGSCKAGDFAAVDELLGKMID------DGCQPSVIT------------- 460
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ +++H +CK G++++A R LR M PN+ Y +LI+
Sbjct: 461 -----------------FGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFL 503
Query: 555 VTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+ ++ E+K +K + +A L L + +++++ +E
Sbjct: 504 CKRGDVDLAIELFDEMK-------EKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMRE 556
Query: 615 MKVFVD 620
+ F D
Sbjct: 557 ERCFPD 562
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 158/364 (43%), Gaps = 18/364 (4%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
F+E ++ + +KPN+ NA ++ C G ++ E M GV+P+ ++
Sbjct: 238 FDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYN 297
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L + + GL E L + M + G + Y++L+ K G ++ A I+L + G
Sbjct: 298 SLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYE-IMLEMPG 356
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
+ + TY + G+ + G ++ NL E + L GI +DR ++S
Sbjct: 357 KKILPNVV---TYSTMADGYAKAGRLEDALNLYNEMKFL---GIGLDRVSYNTLLSIYAK 410
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
LG + A + EM + G + Y L Y K+ + E T++ ++ + ++
Sbjct: 411 LGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLT 470
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y LI+ ++ A +FR+ ++A + Y ++ L +N + LDE+
Sbjct: 471 YSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMT 530
Query: 501 -EDPRVEVKTHDWNSIIHAFCKAGRLE--------DAKRTLRRMIFLQFEPNDQTYLSLI 551
E R V T +NSII AF ++ E +R F+ E D++ ++
Sbjct: 531 KEGIRPNVVT--YNSIIDAFGRSTTAEFLVDGVGASNERQSESPTFMLIEGVDESEINWD 588
Query: 552 NGYV 555
+G+V
Sbjct: 589 DGHV 592
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 156/362 (43%), Gaps = 28/362 (7%)
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
S+ G L + KG+ E+ ++E G+ + + +S+LIS Y K G + A +
Sbjct: 195 STLGRLGKVELAKGV------FETALSE-GYGNTVFAFSALISAYGKSGYFDEAIKVF-- 245
Query: 317 CLGGGNMEQSDFSKE--TYCEVVKGFLQNG-NVKGLANLIIEAQKLEPSGIVVDRSVGFG 373
+M+ S TY V+ + G K + + E + +G+ DR
Sbjct: 246 ----ESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLR---NGVQPDRITYNS 298
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+++ C GL + A ++ +EM G + Y L A CK + A ++++++
Sbjct: 299 LLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKK 358
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ +V Y + + + + A +L+ +M+ I + SY T+++ + R E
Sbjct: 359 ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDAL 418
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
E+ V+ +N+++ + K G+ + R + M + PN TY +LI+
Sbjct: 419 KVCKEM-GSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDV 477
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFD-AVMQVVEKS 612
Y Y + ++ E K Q G+K + L + AL K G D AV+ + E +
Sbjct: 478 YSKGSLYEEAMEVFREFK-------QAGLKADVVLYSELINALCKNGLVDSAVLLLDEMT 530
Query: 613 QE 614
+E
Sbjct: 531 KE 532
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 121/284 (42%), Gaps = 10/284 (3%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+IS LG + A + + + G + + + AY K EA ++ + SG
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252
Query: 434 LQLDVGNYDALIEA-SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
L+ ++ Y+A+I+A +F+ +F +M + + +Y +++ E
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+E++ D ++ +N+++ A CK G+++ A + M + PN TY ++ +
Sbjct: 313 RNLFNEMI-DRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMAD 371
Query: 553 GYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
GY A + L +++E+K GI + + L K G F+ ++V ++
Sbjct: 372 GYAKAGRLEDALNLYNEMKF-------LGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEM 424
Query: 613 QEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKN 656
V D Y A ++ + K R FK+M+ F N
Sbjct: 425 GSSGVKKDVVTY-NALLDGYGKQGKFNEVTRVFKEMKKDRVFPN 467
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 125/566 (22%), Positives = 216/566 (38%), Gaps = 77/566 (13%)
Query: 32 SFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSF 91
L ++ +L R + PPN+ T L ++ + L AW+ F
Sbjct: 142 GLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSEL---------------AWRLF 186
Query: 92 KSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFA------SVVY--VIEKNPKLLDFQ 143
+ L A ++F + + L + L R A V Y +I+ K + +
Sbjct: 187 EQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELE 246
Query: 144 TVHTLLGSMRNANTAAPAF---ALVKCMFKNRYFMPFELWGGFLVDICRKN--SNFVAFL 198
V L+G MR ALV C K F E + ++ R+ +N V F
Sbjct: 247 EVEKLVGEMRGCGCRPDVVTYNALVNCFCK---FGRMERAYSYFAEMKREGVMANVVTFS 303
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
+ C+ + V +A K+ M + G++PNE +
Sbjct: 304 TFVDAFCKNGM---------------------------VREAMKLFAQMRMKGMKPNEVT 336
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ L G + + L + M + G +V Y+ L+ G K G + A L
Sbjct: 337 YTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRL-- 394
Query: 319 GGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
ME++ Y ++ G N + +L+ E ++ G+ +D S+ +I
Sbjct: 395 ----MERAGIRANELLYTTLIHGHFVYKNSERALSLLSE---MKDKGMELDVSLYGALIW 447
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
NL D+A S+L++M+ CG +Y + A K + +EA L+ + SG +
Sbjct: 448 GLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRP 507
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
++ Y AL++ + A S F M + + +Y ++ GL +N R + L
Sbjct: 508 NIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLL 567
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
DE++ D + + S++ K G L+DA +MI N L L GY
Sbjct: 568 DEMI-DKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMI------NSGLQLDLY-GYTC 619
Query: 557 AEQYFSVLMMWHEIKRKISTDGQKGI 582
F L M E + +S + GI
Sbjct: 620 FVWGFCNLNMIQEAREVLSEMIENGI 645
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 156/393 (39%), Gaps = 30/393 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSD-AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+ PN CN L C + S+ A ++ E + PN +F + +G +
Sbjct: 159 VPPNTRTCNHIL--LCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAE 212
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--T 332
L + M G S +V Y+SLI GY K G LE + + G M + T
Sbjct: 213 ARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLV------GEMRGCGCRPDVVT 266
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y +V F + G ++ + E ++ G++ + + A G+ +A +
Sbjct: 267 YNALVNCFCKFGRMERAYSYFAEMKR---EGVMANVVTFSTFVDAFCKNGMVREAMKLFA 323
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M G Y + CK R +A L ++ G+ L+V Y L++
Sbjct: 324 QMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEG 383
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
A +FR M A I + Y T++ G E + L E ++D +E+ +
Sbjct: 384 KVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSE-MKDKGMELDVSLY 442
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
++I C +L++AK L +M +PN+ Y ++++ A + + + +
Sbjct: 443 GALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALL----Q 498
Query: 573 KISTDGQKGIKFEHNLVD--AFLYALVKGGFFD 603
K+ G F N+V A + L K G D
Sbjct: 499 KMMDSG-----FRPNIVTYCALVDGLCKAGSID 526
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 96/233 (41%), Gaps = 8/233 (3%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G ++ ++ EM CGC + Y + +CK R A ++ G+ +V +
Sbjct: 243 GELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTF 302
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
++A + + A LF MR + + +Y ++ G + R + +E+V+
Sbjct: 303 STFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQ 362
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
V + + ++ CK G++ +A+ R M N+ Y +LI+G+ +
Sbjct: 363 QG-VPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSE 421
Query: 562 SVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
L + E+K KG++ + +L A ++ L D ++ K E
Sbjct: 422 RALSLLSEMK-------DKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDE 467
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 161/381 (42%), Gaps = 34/381 (8%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD-AEKVIETMSVLGVRPNESSF 259
EE C + ++ + P+ A N ++G G +D A + + M G+ PN ++
Sbjct: 373 LEEACEVFVEMKENNCSPDAIAYNTLIDG--LGKAGEADMACGLFKEMKDRGLVPNLRTY 430
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLC 317
+ + G Q + +L + E G + Y++LI K G ++ I ++
Sbjct: 431 NIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVE 490
Query: 318 LGG-------------GNMEQSDFSKE------------TYCEVVKGFLQNGNVKGLANL 352
GG G +E +D + E TY ++ F+ NG+V L
Sbjct: 491 KGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKL 550
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ +K E VV + ++ G D+A S+L EM GC + Y + +
Sbjct: 551 LEVMKKHECIPTVVTYTT---LVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMAS 607
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
+ K + E+ L ++ G DV Y +I S D A +F M+E + L
Sbjct: 608 FYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPL 667
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
G+Y T+++ L+++ + + +E+ E V T +N +++ K+ R+++A + +
Sbjct: 668 LGNYKTLLSSLVKDEKIDFALQIFNELQESSLVP-DTFVYNIMVNGLVKSNRVDEACKLV 726
Query: 533 RRMIFLQFEPNDQTYLSLING 553
M P+ TY SL++G
Sbjct: 727 DSMKNQNILPDLFTYTSLLDG 747
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 140/355 (39%), Gaps = 43/355 (12%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
++P+ +F + + G + E M + G + ++ LI VK GN++ A
Sbjct: 283 IQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEAC 342
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRS 369
+ G N+ S + TY +V G + G ++ + +E ++ P I +
Sbjct: 343 K---FFNGMKNLRCSP-NVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNT- 397
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
+I G +D A + EM G L Y + K R EA QL D+
Sbjct: 398 ----LIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL 453
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE-------------ARIYDLKGSY 476
G DV Y+ LI+ ++ ++M E ++G+
Sbjct: 454 KEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGAD 513
Query: 477 LTI------MTGLMENHRPELMAAFL-----DEVVEDPRVEVKTHD-------WNSIIHA 518
T+ L E LM+AF+ DE V+ V +K H+ + +++
Sbjct: 514 RTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEV-MKKHECIPTVVTYTTLVDG 572
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
KAGRL++A LR M EP+ TY SL+ + +Q L ++ E+ RK
Sbjct: 573 LGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRK 627
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 135/687 (19%), Positives = 248/687 (36%), Gaps = 126/687 (18%)
Query: 44 KSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSK 103
+S + DP P Q+ + + + + + + + N DEA K F + P+
Sbjct: 299 RSGRLDPAAEPIQEMIKSGI-DPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNV 357
Query: 104 PVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKN--PKLLDFQTVHTLLGSMRNANTAAPA 161
+L+ + L L+ A V + E N P + + +TL+ + A A A
Sbjct: 358 VTYTTLV---NGLAKAGRLEEACEVFVEMKENNCSPDAIAY---NTLIDGLGKAGEADMA 411
Query: 162 FALVKCMFKNRYFMPF------------------ELWGGF-----------------LVD 186
L K M K+R +P E W F L+D
Sbjct: 412 CGLFKEM-KDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLID 470
Query: 187 ICRKNSNFVAFLKVFEEC------CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDA 240
+ K L + +E C I+ D N A EG ++ A
Sbjct: 471 VLGKGGQMDKVLAIIKEMVEKGGECIISRDSN------------AGHEG------TIEGA 512
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
++ +E S+ E ++ L + G ++ V+L +M + +V Y++L+ G
Sbjct: 513 DRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDG 572
Query: 301 YVKLGNLESASRTILLCLGGGNMEQS--DFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
K G L+ A + ME+ + S TY ++ F + + +L E +
Sbjct: 573 LGKAGRLDEAVSLLR------EMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVR 626
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
G V D S +I+ D+A + M G LG Y L + K+ +
Sbjct: 627 ---KGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEK 683
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
A Q+ ++ S L D Y+ ++ + S A L M+ I +Y +
Sbjct: 684 IDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTS 743
Query: 479 IMTGL-----------------MENHRPELMA--AFLD---------------EVVEDPR 504
++ GL E H P+++A + +D + R
Sbjct: 744 LLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKR 803
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
++S+I + K GR+E+A I PN Y SLI+ + L
Sbjct: 804 CVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRAL 863
Query: 565 MMWHEIKRKISTDGQKGIKFEHNLV--DAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKW 622
++ E++R+ + N+V + L L K G + +++E+ +++ D
Sbjct: 864 ELFEEMQRR---------QCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLV 914
Query: 623 KYKQAFMENHKKLKVAKLRKRNFKKME 649
Y ++ K+ + + FK+M+
Sbjct: 915 TY-NILIDGVGKMGMVDEAESYFKRMK 940
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 141/371 (38%), Gaps = 29/371 (7%)
Query: 210 DENLDF------------MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNES 257
DE +DF + P+ + N + G V +A K++++M + P+
Sbjct: 681 DEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKS-NRVDEACKLVDSMKNQNILPDLF 739
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
++ L G E+ + + M E G +V Y+SL+ K G L A L+
Sbjct: 740 TYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHA----LII 795
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
++ TY ++ + G V+ EA + I + G+ S+
Sbjct: 796 FRAMAKKRCVPDVVTYSSLIDSLGKEGRVE-------EAYYFFENSISKGCTPNVGVYSS 848
Query: 378 CVN----LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++ G+ D+A + +EM C + Y L K R A +L+ ++ G
Sbjct: 849 LIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG 908
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
D+ Y+ LI+ A S F+ M+E I ++ +++ L + + L A
Sbjct: 909 CVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKL-LEA 967
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
L + +E+ +N +I +AG++ +A M P+ T +
Sbjct: 968 CELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRI 1027
Query: 554 YVTAEQYFSVL 564
EQ F L
Sbjct: 1028 LSVREQQFHAL 1038
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 110/262 (41%), Gaps = 10/262 (3%)
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+E+ + M FG + Y+ ++ VK G SA ++ G + +T+
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSA----VIVFGKLGQFRIQPDAQTFRI 292
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V F ++G + A I Q++ SGI +I A V G D+A + M
Sbjct: 293 FVHSFNRSGRLDPAAEPI---QEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMK 349
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
CS + Y + K R EA ++ +++ + D Y+ LI+ + +
Sbjct: 350 NLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEAD 409
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNS 514
A LF++M++ + +Y +++ L + R PE F D + +V T +N+
Sbjct: 410 MACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFT--YNT 467
Query: 515 IIHAFCKAGRLEDAKRTLRRMI 536
+I K G+++ ++ M+
Sbjct: 468 LIDVLGKGGQMDKVLAIIKEMV 489
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 165/404 (40%), Gaps = 57/404 (14%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+I ++ L G C+G + +SDA +++ M +G RP+ +F L + L + V
Sbjct: 152 EPSIVTLSSLLNGYCHG-KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L M + G +V TY V
Sbjct: 211 ALVDRMVQRGCQPNLV---------------------------------------TYGVV 231
Query: 337 VKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
V G + G++ NL+ +EA K+E + ++ +I + D A ++ EM
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST-----VIDSLCKYRHEDDALNLFTEM 286
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + Y + C R ++A++L+ D+ + +V ++ALI+A +
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGL-MENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A L+ +M + I +Y +++ G M + E F + +D V T +N
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--YN 404
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++I+ FCKA R+++ R M N TY +LI+G+ A + M++ K+
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF---KQM 461
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
+S I + L+D L K G + M V E Q K+
Sbjct: 462 VSDGVHPNIMTYNTLLD----GLCKNGKLEKAMVVFEYLQRSKM 501
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 145/345 (42%), Gaps = 40/345 (11%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
E M LG+ N ++ L + + + L M + G+ +V SSL++GY
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKG-FLQNGNVKGLANLIIEAQKLEP 361
+ A + M + + +T + ++ G FL N + +A
Sbjct: 169 KRISDAVALV------DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA----------- 211
Query: 362 SGIVVDRSVGFG----------IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
+VDR V G +++ G D A ++L++M A + +Y +
Sbjct: 212 ---LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
+ CK +A L ++ + G++ +V Y +LI + + A L DM E +I
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDA 528
++ ++ ++ + DE+++ DP + ++S+I+ FC RL++A
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI----FTYSSLINGFCMHDRLDEA 384
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
K MI PN TY +LING+ A++ + ++ E+ ++
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 130/292 (44%), Gaps = 26/292 (8%)
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
++ + L + M G ++ YSSLIS ASR + +M + +
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL------SDMIERKINPN 329
Query: 332 --TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA-------CVNLG 382
T+ ++ F++ G ++EA+KL ++ RS+ I + C++
Sbjct: 330 VVTFNALIDAFVKEGK-------LVEAEKLYDE--MIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
L D+A + + M + C + Y + +CK R E +L ++S GL + Y
Sbjct: 381 L-DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
LI ++D +A +F+ M ++ +Y T++ GL +N + E A + E ++
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE-KAMVVFEYLQR 498
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++E + +N +I CKAG++ED + +P+ Y ++I+G+
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 161/423 (38%), Gaps = 75/423 (17%)
Query: 110 IAHLSSLQDNHNLKRAFASVVYVIEKNPKL---LDFQTVHTLLGSMRNANTAAPAFALVK 166
I LSSL + + + + V ++++ ++ D T TL+ + N A+ A ALV
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 167 CMFKNRYFMPFELWGGFLVD-ICRKN------------------SNFVAFLKVFEECCRI 207
M + R P + G +V+ +C++ +N V + V + C+
Sbjct: 215 RMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKY 273
Query: 208 AL-DENLDF--------MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
D+ L+ ++PN+ ++L C + SDA +++ M + PN +
Sbjct: 274 RHEDDALNLFTEMENKGVRPNVIT-YSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTIL 315
F L + +G K+VE E L +E + YSSLI+G+ L+ A
Sbjct: 333 FNALIDAFVKEG---KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 316 LCLGGGNMEQSDFSKETYCEVVKGFLQN-------------------GNVKGLANLI--- 353
L + TY ++ GF + GN LI
Sbjct: 390 LMISKDCFPNV----VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 354 IEAQKLEPSGIVVDRSVGFGI----------ISACVNLGLSDKAHSILDEMNACGCSVGL 403
+A+ + + +V + V G+ + G +KA + + + +
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y ++ CK + + L +S G++ DV Y+ +I + A +LFR
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 464 MRE 466
MRE
Sbjct: 566 MRE 568
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
G+Y ++ + S A LF M ++R + +++ + + + +L+ + L E
Sbjct: 51 GDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVIS-LGE 109
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
++ + + +N +I+ FC+ ++ A L +M+ L +EP+ T SL+NGY +
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 559 Q 559
+
Sbjct: 170 R 170
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 152/362 (41%), Gaps = 22/362 (6%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN++ + C + DA+K++ M G+ P+ ++ L Y KGL +
Sbjct: 341 QPNVHTYTVLICSLCED-SNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASAL 399
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
E+ SLM S Y+ LI G+ + N+ A + M + TY
Sbjct: 400 EILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLL------HKMLERKLQPNVVTYN 453
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G + G++ L+ + SG+V D I GL ++A S+ + +
Sbjct: 454 ILIHGQCKEGDLGSAYKLL---SLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESL 510
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G +Y + YCK + ++ L+ + S+G + Y++LI+ ++F
Sbjct: 511 KEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNF 570
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV---EDPRVEVKTHD 511
+ A L M + I +Y ++ L+++ + D+++ P V + T
Sbjct: 571 KEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYT-- 628
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY---VTAEQYFSVLMMWH 568
+ IHA+C GRL+DA+ + +M P+ Y I+ Y + + F +L H
Sbjct: 629 --AFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMH 686
Query: 569 EI 570
E+
Sbjct: 687 EV 688
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 22/259 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN+ N + G C + A K++ M+ G+ P+E ++ +GL E+
Sbjct: 445 LQPNVVTYNILIHGQCKE-GDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEA 503
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L + E G + V YS+LI GY K+G + + L G + S TY
Sbjct: 504 RSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNS----ITYNS 559
Query: 336 VVKGFLQNGNVKG---LANLIIEAQKLEPSG----IVVDRSVGFGIISACVNLGLSDKAH 388
++ G+ + N K L +++I+ + +EP+ I++D + D+AH
Sbjct: 560 LIDGYCKEKNFKEARLLVDIMIK-RDIEPAADTYTILIDNLLKDDEF---------DQAH 609
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+ D+M + G + +Y + AYC R +A L+ +++ G+ D Y I+A
Sbjct: 610 DMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAY 669
Query: 449 ITSQDFQSAFSLFRDMREA 467
AF + + M E
Sbjct: 670 GRFGSIDGAFGILKRMHEV 688
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 161/396 (40%), Gaps = 43/396 (10%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PNI+ N + G C L +V +AE + + G+ + ++ L Y +
Sbjct: 198 DMVTPNIFTLNTMVNGYC-KLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVD 256
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-----------------SRTIL- 315
+ M G V Y++LI G+ + ++ A + T++
Sbjct: 257 AANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVII 316
Query: 316 --LCLGGGNMEQSDFSKE-----------TYCEVVKGFLQNGN---VKGLANLIIEAQKL 359
LC G E + KE TY ++ ++ N K + N ++E + L
Sbjct: 317 FALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLE-KGL 375
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
PS + + +I GLS A IL M + CS Y + +C+
Sbjct: 376 IPSVVTYN-----ALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNI 430
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
+A L+ + LQ +V Y+ LI D SA+ L M E+ + + +Y
Sbjct: 431 HKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVF 490
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ L + E A L E +++ ++ ++++I +CK G++ D + L +M+
Sbjct: 491 IDTLCKRGLVE-EARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG 549
Query: 540 FEPNDQTYLSLINGYVTAEQYFSV-LMMWHEIKRKI 574
PN TY SLI+GY + + L++ IKR I
Sbjct: 550 CVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDI 585
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 154/375 (41%), Gaps = 30/375 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PNIY + + C+ L V A V+ + LG +P+ ++F L ++G +
Sbjct: 92 IPPNIYTLHILINSFCH-LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEA 150
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--Y 333
+ L M GF +V Y +LI+G K+GN +A R + G+M Q + Y
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLL------GSMVQKNCQPNVFAY 204
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ ++ V NL E + GI D +I A NL ++L+E
Sbjct: 205 NTIIDSLCKDRQVTEAFNLFSE---MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNE 261
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + + + A CKE + EA +V + G++ +V Y AL++ +
Sbjct: 262 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE 321
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE-------LMAAFLDEVVEDPRVE 506
A +F M SY T++ G + R + LM + D V+
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVK 381
Query: 507 V-----------KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
V +N++I+ +CK R++ A M + P+ TY +LI+G
Sbjct: 382 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 441
Query: 556 TAEQYFSVLMMWHEI 570
E+ + ++HE+
Sbjct: 442 HVERLQDAIALFHEM 456
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 152/362 (41%), Gaps = 40/362 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN++A N ++ C Q V++A + M G+ P+ F + + ++AL L E
Sbjct: 198 QPNVFAYNTIIDSLCKDRQ-VTEAFNLFSEMVTKGISPD--IFTYNSLIHALCNLCEW-K 253
Query: 277 ELESLMNEFGFSSQM---VFYSSLISGYVKLGNLESASRTILLCLGGG---NMEQSDFSK 330
+ +L+NE S M V +++++ K G + A + + G N+
Sbjct: 254 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALM 313
Query: 331 ETYC------EVVKGF---LQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGII--S 376
+ +C E VK F + G NV LI K++ +D+++ + +
Sbjct: 314 DGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR----IDKAIHYTXLMDX 369
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
C L + D+A + D M GC + Y + YCK R +A L ++ L
Sbjct: 370 XCCYLNM-DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIP 428
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN-HRPELMAAF 495
D Y LI + Q A +LF +M +Y ++ L +N + E MA
Sbjct: 429 DTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMA-- 486
Query: 496 LDEVVE----DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
L + +E DP ++V N I C+AG LE A+ + +P+ TY +I
Sbjct: 487 LLKAIEGSNLDPDIQVN----NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 542
Query: 552 NG 553
NG
Sbjct: 543 NG 544
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 169/422 (40%), Gaps = 25/422 (5%)
Query: 148 LLGSMRNANTAAPAFA---LVKCMFKNRYFM-PFELWG-----GFLVDICRKNSNFVAFL 198
LLGSM N FA ++ + K+R F L+ G DI NS A
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 247
Query: 199 KVFE-ECCRIALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
+ E + L+E +D + P++ + N ++ C V++A V++ M GV PN
Sbjct: 248 NLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE-GKVTEAHDVVDKMIQRGVEPNV 306
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR-TIL 315
++ L + L ++ V++ M G ++ Y++LI+GY K+ ++ A T L
Sbjct: 307 VTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXL 366
Query: 316 LCLGGGNMEQSDFSKETYCEVVKGFLQNG-NVKGLANLIIEAQKLEPS----------GI 364
+ + + K V KG + N + L N + Q+++ + +
Sbjct: 367 MDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL 426
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ D +I ++ A ++ EM AC L Y L CK AEA
Sbjct: 427 IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMA 486
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L+ I S L D+ + I+ + + ++A LF ++ + +Y ++ GL
Sbjct: 487 LLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLC 546
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
+ + E+ E+ + +N+I F + A + L+ M+ F +
Sbjct: 547 RRGLLDEASKLFREMDENG-CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADA 605
Query: 545 QT 546
T
Sbjct: 606 ST 607
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 91/225 (40%), Gaps = 21/225 (9%)
Query: 83 NTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDF 142
N DEA K F ++ P+ N+LI +Q F + E P + +
Sbjct: 375 NMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQ-ELIPDTVTY 433
Query: 143 QT-VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKN---SNFVAFL 198
T +H L R + A +V C +P + L+D KN + +A L
Sbjct: 434 STLIHGLCHVERLQDAIALFHEMVAC-----SQIPNLVTYRILLDYLCKNRYLAEAMALL 488
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
K E NLD P+I N A++G C + A + +S G++P+ +
Sbjct: 489 KAIE-------GSNLD---PDIQVNNIAIDGMCRA-GELEAARDLFSNLSSKGLQPDVWT 537
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+ + +GL ++ +L M+E G + Y+++ G+++
Sbjct: 538 YSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 582
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 134/335 (40%), Gaps = 19/335 (5%)
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
K++ V+ +P +G L YA G + M + Y+SLI Y
Sbjct: 118 KIVNAFQVID-KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAY 176
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKL 359
+ ++E A L G ++ +C ++ G+ GN + + +A+ L
Sbjct: 177 AEARDMEGAVACTEEMLSQG----IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENL 232
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
P GIV + I+ A G + ++L +M G LG+Y L + +
Sbjct: 233 VPGGIVYN-----SIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDE 287
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
+ + + GL Y +++ + + A + +M + + K Y I
Sbjct: 288 EKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMI 347
Query: 480 MTGLMENHRPELMAAFL---DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
M G + AAF D V + ++ T +N ++HAFCKAGR++ A L +
Sbjct: 348 MDGYARG--GDFTAAFKVWEDMVSAGLKPDIVT--YNILVHAFCKAGRMDKALGVLENIQ 403
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+ P +TY S+++GYV L ++ IK
Sbjct: 404 ANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIK 438
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 159/397 (40%), Gaps = 26/397 (6%)
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
G LVD ++ + VA FE +KPN++ + + + D E
Sbjct: 135 GLLVDFYARHGDKVAARATFEAM-------RASHIKPNVHIYTSLI----HAYAEARDME 183
Query: 242 KVI---ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+ E M G++ NE+ F + YA G E + Y+S++
Sbjct: 184 GAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIV 243
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEA 356
Y + GN+E+ + ME+ F Y V+ GF + ++ +
Sbjct: 244 QAYCQAGNMETVEALL------AQMEEEGFQGNLGLYTTVLNGFAE---IRDEEKCLSFF 294
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+L+ G+ + I+ G KA IL+EM+ G S +Y + Y +
Sbjct: 295 HRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARG 354
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
A ++ D+ S+GL+ D+ Y+ L+ A + A + +++ R+ +Y
Sbjct: 355 GDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETY 414
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+I+ G ++ + D + + + +NS++ KA ++E+A+ L M+
Sbjct: 415 TSILDGYVKGGHIQKALEVFDRI-KTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEML 473
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
PN+++Y +L GY A M+ +K++
Sbjct: 474 ANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKE 510
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 168/402 (41%), Gaps = 51/402 (12%)
Query: 233 GLQSVSDAEKVI---ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
G + D EK + + G+ P +++G + L+ G K +++ M++ G S
Sbjct: 280 GFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSP 339
Query: 290 QMVFYSSLISGYVKLGNLESA-----------------SRTILL---CLGG------GNM 323
+ Y+ ++ GY + G+ +A + IL+ C G G +
Sbjct: 340 NKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVL 399
Query: 324 EQSDFSK-----ETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIIS 376
E ++ ETY ++ G+++ G+++ + I+ L P G+V S ++S
Sbjct: 400 ENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRP-GVVSYNS----LLS 454
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
+ A +LDEM A G Y + Y + +A + + L +
Sbjct: 455 GLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAI 514
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF- 495
D+ Y AL++A S Q A +F+ + +A + + +Y T++ G + EL A
Sbjct: 515 DIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWA--RKGELSKARD 572
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
L + ++ + T + S I A ++G E+ TL M + E N +TY +LI+G++
Sbjct: 573 LLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWL 632
Query: 556 TAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALV 597
A + + + K G++ + L + L L+
Sbjct: 633 AAADPDQAISCYEQAK-------ASGLQLDSALSNCLLSGLI 667
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 131/315 (41%), Gaps = 15/315 (4%)
Query: 176 PFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ 235
P ++ ++D + +F A KV+E+ L KP+I N + C +
Sbjct: 339 PNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGL-------KPDIVTYNILVHAFCKAGR 391
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+ A V+E + + P ++ + Y G +K +E+ + G +V Y+
Sbjct: 392 -MDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYN 450
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
SL+SG K +E+A + L G + ++ +Y + +G+ + G+V+ +
Sbjct: 451 SLLSGLAKARQMENARLMLDEMLANGVVP----NERSYTALTEGYARAGDVEKAFGMF-- 504
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
Q+++ + +D ++ AC G +A + ++ G Y L + +
Sbjct: 505 -QRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWAR 563
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
+ ++A L+ D+ G LD Y + I+A S D + MRE ++ +
Sbjct: 564 KGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNART 623
Query: 476 YLTIMTGLMENHRPE 490
Y T++ G + P+
Sbjct: 624 YTTLIHGWLAAADPD 638
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 119/310 (38%), Gaps = 16/310 (5%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T + L+ + A A +++ + NR E + L D K + L+V
Sbjct: 375 DIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSIL-DGYVKGGHIQKALEV 433
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
F+ L +P + + N+ L G Q + +A +++ M GV PNE S+
Sbjct: 434 FDRIKTAGL-------RPGVVSYNSLLSGLAKARQ-MENARLMLDEMLANGVVPNERSYT 485
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L YA G EK + M + + +V Y +L+ K G ++ A
Sbjct: 486 ALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDA 545
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
G ++ TYC ++ G+ + G + +L+ + QK G +D I AC
Sbjct: 546 G----LKHNRITYCTMLDGWARKGELSKARDLLKDMQK---HGFHLDTICYTSFIKACFR 598
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G +++ L M V Y + + +A +SGLQLD
Sbjct: 599 SGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSAL 658
Query: 441 YDALIEASIT 450
+ L+ I+
Sbjct: 659 SNCLLSGLIS 668
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 144/357 (40%), Gaps = 34/357 (9%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PN+ L+G C +A ++ E M G++P+E ++ L G E
Sbjct: 411 DGIIPNVITYTTLLQGQC-DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAE 469
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
E S + G + V+Y++LI G+ K GN + A+ I + G S TY
Sbjct: 470 ---EAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS----YTY 522
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ + K L + ++ GI +I + G D A + +E
Sbjct: 523 SVLLHALCKQ---KRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 579
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + G Y + +YCKE R +A L++ + G+ DV Y+ LI+
Sbjct: 580 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 639
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP----------------ELMAAFLD 497
AFS + M A +Y ++ L++ + ++ L+
Sbjct: 640 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLE 699
Query: 498 EVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+V+ +P V ++S+I FCKAGRLE+A L M PN+ Y LI
Sbjct: 700 RMVKHGLNPTVTT----YSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 752
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 144/344 (41%), Gaps = 29/344 (8%)
Query: 218 PNIYACNAALEGCCYG-LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-QEKI 275
P++ NA + G Y L ++DA K+ E M G P++ ++ L Y GL +K
Sbjct: 206 PSVMTYNAMIVG--YSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY-----GLCDQKT 258
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK-- 330
E E L+N GF+ +V +++LI+GY + A R N S K
Sbjct: 259 EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRM-------KNKMMSSKCKLD 311
Query: 331 -ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
+ + +++ ++ +K L+ E + +G+V + II G D A
Sbjct: 312 LQVFGKLINSLIKKDRLKEAKELLNE---ISANGLVPNVITYTSIIDGYCKSGKVDIALE 368
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+L M GC Y + K+ + +A L+ + G+ +V Y L++
Sbjct: 369 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 428
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
DF +AF LF M + + + +Y + L + R E +F +V K
Sbjct: 429 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKV 485
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ + ++I F KAG + A + RMI P+ TY L++
Sbjct: 486 Y-YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHA 528
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 131/338 (38%), Gaps = 51/338 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ + ++G C V A +V++ M G +PN ++ L Y K +
Sbjct: 345 PNVITYTSIIDGYCKS-GKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMA 403
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCE 335
L + M + G ++ Y++L+ G + ++A R + MEQ+ + Y
Sbjct: 404 LLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEM------MEQNGLKPDEHAYAV 457
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ + G + + I+ G+ + + +I G +D A ++++ M
Sbjct: 458 LTDALCKAGRAEEAYSFIVR------KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMI 511
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC+ Y L A CK+ R EA ++ +S G++ + Y LI+ +
Sbjct: 512 DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHD 571
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A ++ +M + H+P +
Sbjct: 572 HAKRMYNEMTSS------------------GHKPSATT------------------YTVF 595
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
I+++CK GRLEDA+ + +M P+ TY LI+G
Sbjct: 596 INSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 633
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 156/374 (41%), Gaps = 35/374 (9%)
Query: 263 AYLYALKGL-----QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
Y +AL+ L E + + S + + G V Y+++I Y K G+L +A R L
Sbjct: 35 CYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLL 94
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL-----IIEAQKLEPSGIVVDRSVGF 372
L GG +E F+ +V G+ + G ++ L ++ Q+ E S ++ +
Sbjct: 95 LEGG-LEPETFTCNA---LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQ---- 146
Query: 373 GIISA-CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
G+ A CV KA + M GCS + + + CK R +A L +
Sbjct: 147 GLCDAKCVR-----KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ 201
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
+G+ V Y+A+I A + M + + +Y T++ GL + E
Sbjct: 202 NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEA 261
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+ V E V T + ++I+ +C A + +DA R +M+ + + + Q + LI
Sbjct: 262 EELLNNAVKEGFTPTVVT--FTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 319
Query: 552 NGYVTAEQYFSVLMMWHEIKRKISTDG-QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
N + ++ L E+ +IS +G + +++D + K G D ++V++
Sbjct: 320 NSLIKKDR----LKEAKELLNEISANGLVPNVITYTSIIDGY----CKSGKVDIALEVLK 371
Query: 611 KSQEMKVFVDKWKY 624
+ + W Y
Sbjct: 372 MMERDGCQPNAWTY 385
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A+++ M+ G +P+ +++ Y +G E +L M G + +V Y+ LI
Sbjct: 573 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 632
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNG-------NVKGLANL 352
G +G ++ A T+ +G + + TYC ++K L+ + G+ NL
Sbjct: 633 GCGHMGYIDRAFSTLKRMVGA----SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNL 688
Query: 353 IIEAQKLEPSGIVVDRSVGFGI----------ISACVNLGLSDKAHSILDEMNACGCSVG 402
I +L+ + +++R V G+ I+ G ++A +LD M G S
Sbjct: 689 I----ELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPN 744
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+Y +K C +A V +S G Q + +Y L+ DF+ SLF
Sbjct: 745 EDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFC 804
Query: 463 DMRE 466
D+ E
Sbjct: 805 DLLE 808
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 138/358 (38%), Gaps = 47/358 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P + CNA + G C + A + M ++G + NE S+ L K
Sbjct: 99 LEPETFTCNALVLGYCR-TGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKA 157
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L +M G S + ++ LISG K G +
Sbjct: 158 LVLFLMMKRDGCSPNVRAFTFLISGLCKSGRV---------------------------- 189
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
G A L+ +A + +G+V +I LG + A I + M
Sbjct: 190 ------------GDARLLFDA--MPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELME 235
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC Y + C + +T EA +L+ + G V + LI ++ F
Sbjct: 236 KNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 294
Query: 456 SAFSLFRDMREARI-YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A + M ++ DL+ + ++ L++ R + L+E+ + V + S
Sbjct: 295 DALRMKNKMMSSKCKLDLQ-VFGKLINSLIKKDRLKEAKELLNEISANGLVP-NVITYTS 352
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
II +CK+G+++ A L+ M +PN TY SL+ G V ++ + + ++++
Sbjct: 353 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 410
>gi|218191264|gb|EEC73691.1| hypothetical protein OsI_08267 [Oryza sativa Indica Group]
Length = 751
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 156/361 (43%), Gaps = 41/361 (11%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNES 257
+VFEE L N++ P+I N G C GL V + +++ M+ G+ PN
Sbjct: 386 QVFEE----MLKANIE---PDIVTYNILASGFCKSGL--VMEVFDLLDRMADQGLEPNSL 436
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
++G + G + L +++ E G V YSS++ GY+ G + A +
Sbjct: 437 TYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRV 496
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGII 375
GN+ FS +++ + GNV+G +N+ I+ + P I + +I
Sbjct: 497 ARQGNLVDH-FSCS---KLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSK-----LI 547
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
S G DKAH +M G S+ + VY + YCK R EA QL + +++ G++
Sbjct: 548 SIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIK 607
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
DV Y L++ + Q + ++ R S+L L NH L +
Sbjct: 608 PDVIAYTVLLDGHLKETLQQGWEGIAKERR---------SFL-----LRANHNKLLSS-- 651
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++D ++E + +I CKA L +A+ M+ P+ Y +LINGY
Sbjct: 652 ----MKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYC 707
Query: 556 T 556
+
Sbjct: 708 S 708
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 147/354 (41%), Gaps = 27/354 (7%)
Query: 222 ACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESL 281
A N ++G C ++ + +AEK++E + G P+ + +L Y G K V+
Sbjct: 275 AYNMVMDGLCKEMR-LDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 333
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL------LCLGGGNMEQSDFSKE---- 331
M G + S L+ + KLG L L L G M+ + E
Sbjct: 334 MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKGEMQNAQQVFEEMLK 393
Query: 332 --------TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNL 381
TY + GF ++G V + +L+ + Q LEP+ + + G I+ C
Sbjct: 394 ANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSL----TYGIAIVGFCRGG 449
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
LS+ A + + + G +Y + Y T A L + ++ G +D +
Sbjct: 450 NLSE-AEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSC 508
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
LI + Q A ++ + M E + SY +++ +N + + ++V+
Sbjct: 509 SKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQ 568
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+ + + +++ +CKAGRL++A + +M L +P+ Y L++G++
Sbjct: 569 RG-LSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHL 621
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 29/195 (14%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D A+ IL E+N V Y + CKE R EA +L+ + + G DV Y L
Sbjct: 255 DLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYL 314
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-----PELMAAFL--- 496
I++ + A D EA + + I++ L++ R E++A FL
Sbjct: 315 IQSYCKMGNLIKAV----DHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFK 370
Query: 497 --------------DEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+V E+ +E +N + FCK+G + + L RM
Sbjct: 371 DSGLHLDKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQG 430
Query: 540 FEPNDQTYLSLINGY 554
EPN TY I G+
Sbjct: 431 LEPNSLTYGIAIVGF 445
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 154/404 (38%), Gaps = 65/404 (16%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+Y N + C Q + + + + M GV P+ ++ L Y +GL E+ EL
Sbjct: 253 NVYTLNIMINALCKN-QKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFEL 311
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNL-----------------ESASRTILL--CLG 319
M+ G + Y+++I+G K G ++A+ ILL C
Sbjct: 312 MDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCR 371
Query: 320 GGNMEQSD--FSKETYCEVVKGFLQNGNVKGLAN---LIIEAQK----LEPSGIVVDRSV 370
NM ++ F + VV + + GL + + +A K ++ +G+ D +
Sbjct: 372 NDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 431
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
+I G+ +A + DEM GC + + Y L CKE +EA +L +++
Sbjct: 432 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMT 491
Query: 431 SSG-----------------------------------LQLDVGNYDALIEASITSQDFQ 455
G L+ DV Y+ LI+ + +
Sbjct: 492 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME 551
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
L+ DM RIY SY ++ G DE+VE E N+I
Sbjct: 552 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG-FEATIITCNTI 610
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ +C+AG A L M+ P+ TY +LING++ E
Sbjct: 611 VKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 654
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 110/535 (20%), Positives = 201/535 (37%), Gaps = 112/535 (20%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
D AW+ ++ + + + + N +I L Q N K S + +E+ D T
Sbjct: 236 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTK----SFLSDMEEKGVFPDVVT 291
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
+TL+ + AF L+ M + P +++ K ++ V +E
Sbjct: 292 YNTLINAYCRQGLLEEAFELMDSM-SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 350
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
+I M P+ N L CC ++ DAE++ + M GV P+ SF L
Sbjct: 351 LKIG-------MSPDTATYNILLVECCRN-DNMMDAERIFDEMPSQGVVPDLVSFSALIG 402
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR------------ 312
L + G ++ ++ M G + V Y+ LI G+ + G + A +
Sbjct: 403 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 462
Query: 313 ------TIL--LCLGGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANL- 352
TIL LC E + E T+ ++ G+ ++GN+ L
Sbjct: 463 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 522
Query: 353 -IIEAQKLEPSGI-----------------------------VVDRSVGFGI-ISACVNL 381
++ + L+P + + + +GI I+ N+
Sbjct: 523 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 582
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G +A + DEM G + +K YC+ +A + + ++ G+ D Y
Sbjct: 583 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITY 642
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ LI I ++ AF+L M + GL+ P+++
Sbjct: 643 NTLINGFIKEENMDRAFALVNKMENS--------------GLL----PDVIT-------- 676
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+N I++ F + GR+++A+ + +MI P+ TY SLING+VT
Sbjct: 677 ----------YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVT 721
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 166/386 (43%), Gaps = 38/386 (9%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+ Y N + G C G S+A V+E M G P+ ++ L + ++
Sbjct: 162 VEPDAYTYNTLIRGLC-GRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQA 220
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++L M++ G + +V Y+ +++G + G +E A L L E + S Y
Sbjct: 221 MKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAME-FLKNLPSYGCEPNTVS---YNI 276
Query: 336 VVKGFLQNGNVKGLANLIIE-AQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDE 393
V+KG + L+ E A K P +V F +IS GL + A +L++
Sbjct: 277 VLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT-----FNMLISFLCRRGLVEPAMEVLEQ 331
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M GC+ Y P L A+CK+ + +A + V + S G D+ +Y+ L+ A + +
Sbjct: 332 MPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGE 391
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A L +++ + SY T++ GL + + + LDE+ ++ ++
Sbjct: 392 VDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSK-GLQPDIITYS 450
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+I C+ R+E+A RT ++ + P TA Y ++L+ KR+
Sbjct: 451 TIASGLCREDRIEEAVRTFCKVQDMGIRP-------------TAALYNAILLGL--CKRR 495
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKG 599
+ HN +D F Y + G
Sbjct: 496 ET----------HNAIDLFAYMISSG 511
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 153/371 (41%), Gaps = 37/371 (9%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T +TL+ + + A A+++ MF+ R +P + L++ K S + +K+
Sbjct: 165 DAYTYNTLIRGLCGRGRTSNALAVLEDMFR-RGCLPDVVTYTILLEATCKRSGYKQAMKL 223
Query: 201 FEE--------------------CCRIALDENLDFMK--------PNIYACNAALEGCCY 232
+E C +++ ++F+K PN + N L+G +
Sbjct: 224 LDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL-F 282
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV 292
+ DAEK++E M+ G PN +F L +GL E +E+ M ++G + +
Sbjct: 283 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSL 342
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL 352
Y+ L+ + K + A + L + G D +Y ++ +NG V L
Sbjct: 343 SYNPLLHAFCKQKKIHKAMEFVELMVSRGCY--PDIV--SYNTLLTALCRNGEVDVAIEL 398
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ + + S +++ + +I G + +A +LDEM + G + Y
Sbjct: 399 LHQLKDKGCSPVLISYNT---VIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASG 455
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
C+E R EA + + G++ Y+A++ ++ +A LF M +
Sbjct: 456 LCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPN 515
Query: 473 KGSYLTIMTGL 483
+ +Y ++ GL
Sbjct: 516 ESTYTILVEGL 526
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/352 (19%), Positives = 150/352 (42%), Gaps = 44/352 (12%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ DA +++++++ L P+ ++ G A L + + ++ G ++ Y++
Sbjct: 83 LDDALRLVDSLAGLN-PPSPAAVGPCAALIKKLCASGRTADARRVLAASG--PDVMVYNA 139
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE----TYCEVVKGFLQNGNVKGLANL 352
+++GY G L++A R + +D E TY +++G G +N
Sbjct: 140 MVAGYCGAGQLDAARRLV-----------ADMPVEPDAYTYNTLIRGLCGRGRT---SNA 185
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ + + G + D ++ A +A +LDEM+ GC+ + Y L
Sbjct: 186 LAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNG 245
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
C+E R +A + + ++ S G + + +Y+ +++ T++ ++ A L +M
Sbjct: 246 ICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAH------ 299
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV-----------KTHDWNSIIHAFCK 521
KG ++T M L++ + +P +EV + +N ++HAFCK
Sbjct: 300 KGCPPNVVTFNM------LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCK 353
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++ A + M+ P+ +Y +L+ + + + H++K K
Sbjct: 354 QKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDK 405
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 87/230 (37%), Gaps = 43/230 (18%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ C RT+ A ++ D+ G DV Y L+EA+ ++ A L +M +
Sbjct: 173 IRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHD--- 229
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
KG I+T +N +++ C+ GR+EDA
Sbjct: 230 ---KGCAPDIVT------------------------------YNVVLNGICQEGRVEDAM 256
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
L+ + EPN +Y ++ G TAE+ W + ++ + KG
Sbjct: 257 EFLKNLPSYGCEPNTVSYNIVLKGLFTAER-------WEDAEKLMEEMAHKGCPPNVVTF 309
Query: 590 DAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAK 639
+ + L + G + M+V+E+ + + Y K+ K+ K
Sbjct: 310 NMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHK 359
>gi|125569816|gb|EAZ11331.1| hypothetical protein OsJ_01195 [Oryza sativa Japonica Group]
Length = 943
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 148/347 (42%), Gaps = 38/347 (10%)
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
++A +++ M G+ + +G L + Y GL K + +M + G ++ +V Y+++
Sbjct: 74 TEAAQLVREMEGKGLVGDAVLYGSLVHGYMSSGLLMKGLREHRVMLDKGIAADVVSYTTV 133
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
I G + E + ++ L N + + TY ++ GF + + +++ +
Sbjct: 134 IDGLCR----ERSVEKVMGFLDEMNRRDAKPNLITYTSLIGGFCKRNRLDDAFSIV---R 186
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
KLE +G+VVD V +I G D+A S+L+EM+ G +G+ Y + CK
Sbjct: 187 KLEQTGVVVDEYVYSILIDNLCKKGYLDRAFSLLEEMDKKGIKIGIVTYNSVINGLCKVG 246
Query: 418 RTAEATQL--------------------------VMDI----SSSGLQLDVGNYDALIEA 447
T +A ++ VM I SSG+ +DV + LI+A
Sbjct: 247 HTKKAVEIYEGIAADNFTYSTLLHGHIKVEDATGVMAIKGRLESSGVTIDVVTCNVLIKA 306
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ A SLF M E R+ +Y T++ + + + D+ ED
Sbjct: 307 LFMIKKVDDACSLFLRMPEMRLRPNIVTYHTVIDMMCKLGETDRALQLFDDYKEDILFS- 365
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
T N +I A C G++ A++ +I P+ TY LI+ +
Sbjct: 366 STIVHNCLIIALCNGGKVNMAEQIFNDLIQRNLRPDSCTYKKLIHTH 412
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 113/280 (40%), Gaps = 24/280 (8%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQN 343
G+S + YS L+ G K G LE A + LC +M++ + V+ G Q
Sbjct: 569 GYSVDLAMYSILVEGLCKSGYLEKA---LDLC---ESMKEEGIQPNIVIHNSVLNGLCQQ 622
Query: 344 GNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
G + L +E+ ++ P+ +V S+ +I+A G D AH + +M+ G
Sbjct: 623 GCLTEAFRLFDYLESSEVLPT--LVTYSI---LIAALCREGFLDDAHELFQKMSTKGIKP 677
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
VY + YC T +A +L+ L D A+I D +SA F
Sbjct: 678 TTRVYNLLISGYCNYGLTEKALELISHFEEIFLFPDAITIGAIINGHCLKGDIESALGFF 737
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV---------EVKTHDW 512
+ + +++++ GL R E + L E+ + V +++ +
Sbjct: 738 SEYYHKEMVPDFVGFMSLVKGLYAKGRMEESRSILREMFQCKEVAEFINSVGDKIQAESF 797
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++ + C+ GR+++ L + + +D S ++
Sbjct: 798 VGLLFSACEQGRIDEVVTILNEVALMSVSSSDSNNCSTLS 837
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 22/282 (7%)
Query: 192 SNFVAFLKVFEECCRIA--------LDE-NLDFMKPNIYACNAALEGCCYGLQSVSDAEK 242
++ V++ V + CR LDE N KPN+ + + G C + DA
Sbjct: 125 ADVVSYTTVIDGLCRERSVEKVMGFLDEMNRRDAKPNLITYTSLIGGFC-KRNRLDDAFS 183
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
++ + GV +E + L KG ++ L M++ G +V Y+S+I+G
Sbjct: 184 IVRKLEQTGVVVDEYVYSILIDNLCKKGYLDRAFSLLEEMDKKGIKIGIVTYNSVINGLC 243
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
K+G+ + A I + N TY ++ G ++ + G+ + +LE S
Sbjct: 244 KVGHTKKAVE-IYEGIAADNF--------TYSTLLHGHIKVEDATGVMAI---KGRLESS 291
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G+ +D +I A + D A S+ M + Y + CK T A
Sbjct: 292 GVTIDVVTCNVLIKALFMIKKVDDACSLFLRMPEMRLRPNIVTYHTVIDMMCKLGETDRA 351
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
QL D L ++ LI A A +F D+
Sbjct: 352 LQLFDDYKEDILFSSTIVHNCLIIALCNGGKVNMAEQIFNDL 393
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ DA ++ + MS G++P + L Y GL EK +EL S E + +
Sbjct: 660 LDDAHELFQKMSTKGIKPTTRVYNLLISGYCNYGLTEKALELISHFEEIFLFPDAITIGA 719
Query: 297 LISGYVKLGNLESA 310
+I+G+ G++ESA
Sbjct: 720 IINGHCLKGDIESA 733
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 142/328 (43%), Gaps = 31/328 (9%)
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG------NLESASRTILLCLGGGNM 323
G+ + L L+N F + + F S+ + +K G L + + + C G +
Sbjct: 123 GVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFC---GEI 179
Query: 324 EQS------------DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
+++ + +Y ++ G + G K +A L+ +KLE + D +
Sbjct: 180 KRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLL---RKLEGHSVKPDVVMY 236
Query: 372 FGIISA-CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
II C N + D A + EM G S + Y + +C EA L+ ++
Sbjct: 237 TTIIHCLCKNKRVGD-ACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMK 295
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
+ DV ++ LI+A A SLF +M+ ++ +Y +++ GL +NH E
Sbjct: 296 LKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLE 355
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
A ++ E ++ + + ++ A CK GRLE+AK+ + ++ + N +TY +
Sbjct: 356 RAIALCKKMKEQ-GIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVM 414
Query: 551 INGYVTAEQYFSVLMMWHEIKRKISTDG 578
ING A + V+ ++K K+ G
Sbjct: 415 INGLCKAGLFGDVM----DLKSKMEGKG 438
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 83/214 (38%), Gaps = 35/214 (16%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN++ N + G C + ++ +A ++ M + + P+ +F L +G ++
Sbjct: 264 ISPNVFTYNTLIYGFCI-MGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEA 322
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-----------------SRTILL-- 316
+ L M +V Y+SLI G K +LE A S TILL
Sbjct: 323 ISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDA 382
Query: 317 CLGGGNMEQS------------DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
GG +E + + TY ++ G + G + +L K+E G
Sbjct: 383 LCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL---KSKMEGKGC 439
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
+ D II A +DKA L EM A G
Sbjct: 440 MPDAITFKTIICALFEKDENDKAEKFLREMIARG 473
>gi|356520039|ref|XP_003528673.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 585
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 54/352 (15%)
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
SFG + G K L +++ EFGFS +V Y++LI G K G++ A + L C
Sbjct: 203 SFGIMIKGRCEAGDLMKGFRLLAMLEEFGFSLNVVIYTTLIYGCCKSGDVRLAKK--LFC 260
Query: 318 LGGGNMEQSDFSKETY-CEVV-KGFLQNG-NVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
M++ + C V+ GF + G +G + ++PSGIV + +
Sbjct: 261 ----TMDRLGLVANHHSCGVLMNGFFKQGLQREGFX----MYENMKPSGIVPNAYAYNCV 312
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
IS N + DKA ++ EM G + G+ Y C+ + EA ++V ++ GL
Sbjct: 313 ISEYCNARMVDKALNVFAEMREKGIAYGVITY--NXGGLCRGKKFGEAVKIVHQVNKVGL 370
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
++ Y+ LI +A LF ++ + +Y T++ G + E +A
Sbjct: 371 SPNIVTYNILINGFCDVGKIDTAVRLFNQLKSNGLSPTLVTYNTLIAGY---SKVENLAG 427
Query: 495 FLDEVVE-----DPRVEV----------------KTHDWNS---------------IIHA 518
LD V E P +V KT + +S +IH
Sbjct: 428 ALDLVKEMEERCIPPSKVTYXILIDAFARLNYTKKTCEMHSLMEKSGLVSDVXHSVLIHG 487
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
C G +++A + L+ + L EPN Y ++I+GY + L +++E+
Sbjct: 488 LCMNGNMKEASKLLKSLGELHLEPNSVIYNTMIHGYCKEGSSYRALRLFNEM 539
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 13/231 (5%)
Query: 229 GCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFS 288
G C G + +A K++ ++ +G+ PN ++ L + G + V L + + G S
Sbjct: 348 GLCRG-KKFGEAVKIVHQVNKVGLSPNIVTYNILINGFCDVGKIDTAVRLFNQLKSNGLS 406
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNV 346
+V Y++LI+GY K+ NL A + ME+ SK TY ++ F +
Sbjct: 407 PTLVTYNTLIAGYSKVENLAGALDLV------KEMEERCIPPSKVTYXILIDAFARLNYT 460
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
K + +E SG+V D I C+N G +A +L + +Y
Sbjct: 461 KKTCEM---HSLMEKSGLVSDVXHSVLIHGLCMN-GNMKEASKLLKSLGELHLEPNSVIY 516
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
+ YCKE + A +L ++ S + +V ++ + I + +Q A
Sbjct: 517 NTMIHGYCKEGSSYRALRLFNEMVHSRMVPNVASFCSTIGLLCRDEKWQEA 567
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 96/242 (39%), Gaps = 14/242 (5%)
Query: 336 VVKGFLQNGNV-KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG---LSDKAHSIL 391
++KG + G++ KG L + LE G ++ + +I C G L+ K +
Sbjct: 207 MIKGRCEAGDLMKGFRLLAM----LEEFGFSLNVVIYTTLIYGCCKSGDVRLAKKLFCTM 262
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
D + GV + + K+ E + ++ SG+ + Y+ +I +
Sbjct: 263 DRLGLVANHHSCGVL---MNGFFKQGLQREGFXMYENMKPSGIVPNAYAYNCVISEYCNA 319
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ A ++F +MRE I +T G + + A + V +
Sbjct: 320 RMVDKALNVFAEMREKGI---AYGVITYNXGGLCRGKKFGEAVKIVHQVNKVGLSPNIVT 376
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N +I+ FC G+++ A R ++ P TY +LI GY E L + E++
Sbjct: 377 YNILINGFCDVGKIDTAVRLFNQLKSNGLSPTLVTYNTLIAGYSKVENLAGALDLVKEME 436
Query: 572 RK 573
+
Sbjct: 437 ER 438
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 161/421 (38%), Gaps = 54/421 (12%)
Query: 193 NFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
+FV L E + L L P++ + + + G C + K+IE M G+
Sbjct: 677 HFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR-FGELDKVWKLIEKMKQKGL 735
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEF------GFSSQMVFYSSLISGYVKLGN 306
+PN ++G ++ GL +I +L F G + Y++L+ G+ K G+
Sbjct: 736 KPNSYTYG------SIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGD 789
Query: 307 LESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPS 362
+ +AS+ M D + + TY ++ GF Q G++ L E + LEP
Sbjct: 790 IRAASKFFY------EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPD 843
Query: 363 GIVVDRSV-----------GFGIISACVNLGLS-------------------DKAHSILD 392
I + F + + + G S D A+ +L
Sbjct: 844 IITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 903
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM G + Y + CK EA +LV + ++GL D Y L++A S
Sbjct: 904 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 963
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A + +M + ++ +M G + E L+ ++ + +
Sbjct: 964 EMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTF 1022
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
N ++ +C L+ A + M EP+ +TY +L+ G+ A ++ E+K
Sbjct: 1023 NCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKG 1082
Query: 573 K 573
K
Sbjct: 1083 K 1083
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 151/391 (38%), Gaps = 50/391 (12%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
KVFE+ L ++D +CN L + A V +GV N +S
Sbjct: 619 KVFEKMLNYGLVLSVD-------SCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVAS 671
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI---- 314
+ + + G + L LM G++ ++ YS++I+GY + G L+ + I
Sbjct: 672 YNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMK 731
Query: 315 ----------------LLC---------------LGGGNMEQSDFSKETYCEVVKGFLQN 343
LLC +G G + + Y +V GF +
Sbjct: 732 QKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI----VYTTLVDGFCKR 787
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
G+++ + E + I D IIS +G +A + EM G +
Sbjct: 788 GDIRAASKFFYEMHSRD---ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDI 844
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
+ + YCK +A ++ + +G +V Y LI+ D SA L +
Sbjct: 845 ITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 904
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M + + +Y +I+ GL ++ E + E E + T + +++ A+CK+G
Sbjct: 905 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE-FEAAGLNADTVTYTTLMDAYCKSG 963
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++ A+ L M+ +P T+ L+NG+
Sbjct: 964 EMDKAQEILTEMLGKGLQPTIVTFNVLMNGF 994
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/399 (19%), Positives = 162/399 (40%), Gaps = 51/399 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ A + G C + + +A K+ M G+ P+ +F L Y G +
Sbjct: 805 ITPDVLTYTAIISGFCQ-IGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDA 863
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ + M + G S +V Y++LI G K G+L+SA+ +L + ++ + F TY
Sbjct: 864 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE-LLHEMWKIGLQPNIF---TYNS 919
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+V G ++GN++ L+ E E +G+ D ++ A G DKA IL EM
Sbjct: 920 IVNGLCKSGNIEEAVKLVGE---FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEML 976
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + + + +C + +L+ + + G+ + ++ L++ + +
Sbjct: 977 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLK 1036
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+A ++++DM +G VE + ++
Sbjct: 1037 AATAIYKDMCS------RG------------------------------VEPDGKTYENL 1060
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
+ C A +++A + M F + TY LI G+ +++ ++ +++R
Sbjct: 1061 VKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRR--- 1117
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
G+ + + D F KG D ++ +++ E
Sbjct: 1118 ----DGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1152
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 127/276 (46%), Gaps = 14/276 (5%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M +GFS ++ Y+++I GY K G + A +L + + ++ T+ ++ GF
Sbjct: 255 MKAWGFSPSVITYNTIIDGYCKAGKMFKAD-ALLKEMVAKRIHPNEI---TFNILIDGFC 310
Query: 342 QNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
++ NV + E Q+ L+P+ + + +I+ + G D+A + D+M+ G
Sbjct: 311 RDENVTAAKKVFEEMQRQGLQPNVVTYN-----SLINGLCSNGKLDEALGLQDKMSGMGL 365
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
+ Y + +CK+ EA +++ DI GL +V ++ LI+A + AF
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFL 425
Query: 460 LFRDMREARIYDLKGSYLTIMTGL-MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
L M + + +Y ++ G E + E A L + +E ++ +N ++ A
Sbjct: 426 LRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE--ARKLAKEMEGNGLKADLVTYNILVDA 483
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
CK G A R L M + P+ TY +LI+GY
Sbjct: 484 LCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGY 519
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 130/332 (39%), Gaps = 44/332 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN N ++G C ++V+ A+KV E M G++PN ++ L G ++
Sbjct: 295 IHPNEITFNILIDGFCRD-ENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEA 353
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L+ M+ G +V Y++LI+G+ K L+ A + D K
Sbjct: 354 LGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML-----------DDIGK----- 397
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+GLA +I L I A G D A + M
Sbjct: 398 -----------RGLAPNVITFNTL---------------IDAYGKAGRMDDAFLLRSMML 431
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y + +C+E EA +L ++ +GL+ D+ Y+ L++A + +
Sbjct: 432 DTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETR 491
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A L +M E + +Y ++ G A + ++E +N +
Sbjct: 492 KAVRLLDEMFEVGLNPSHLTYNALIDGYFREGN-STAALNVRTLMEKKGRRANIVTYNVL 550
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
I FC G+LE+A R L M+ PN TY
Sbjct: 551 IKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 582
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 134/331 (40%), Gaps = 41/331 (12%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T +T++ A A AL+K M R P E+ L+D ++ N A KVFEE
Sbjct: 266 TYNTIIDGYCKAGKMFKADALLKEMVAKR-IHPNEITFNILIDGFCRDENVTAAKKVFEE 324
Query: 204 --------------------CCRIALDENLDF--------MKPNIYACNAALEGCCYGLQ 235
C LDE L +KPN+ NA + G C +
Sbjct: 325 MQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKK-K 383
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+ +A ++++ + G+ PN +F L Y G + L S+M + G + Y+
Sbjct: 384 MLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYN 443
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
LI G+ + GN++ A + L GN ++D TY +V + G + L+ E
Sbjct: 444 CLIVGFCREGNVKEARK--LAKEMEGNGLKADLV--TYNILVDALCKKGETRKAVRLLDE 499
Query: 356 AQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ L PS + + +I G S A ++ M G + Y +K +
Sbjct: 500 MFEVGLNPSHLTYN-----ALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGF 554
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
C + + EA +L+ ++ GL + YD L
Sbjct: 555 CNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 10/192 (5%)
Query: 364 IVVDRSVGFGIISACVNLGLS--DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
I+VD V + + ++L L D+A ++A C+ P L + KE R
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCN-------PMLVSLVKEGRIGV 212
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
+ ++ + ++V +D +I FQ A + DM+ +Y TI+
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
G + + A L E+V R+ +N +I FC+ + AK+ M +
Sbjct: 273 GYCKAGKMFKADALLKEMVAK-RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331
Query: 542 PNDQTYLSLING 553
PN TY SLING
Sbjct: 332 PNVVTYNSLING 343
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 171/384 (44%), Gaps = 56/384 (14%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ + + TM G++PN S+ L YA G+ ++ + + + + GF +V Y+S
Sbjct: 355 IENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTS 414
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
L++ Y K G E A M+ + + +C
Sbjct: 415 LLNAYGKSGKPEKA------------MKVFELMRRNHC---------------------- 440
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+P+ + + +I A + GL +A IL EM G + V + TL A C
Sbjct: 441 ---KPNLVSYN-----ALIDAYGSKGLLTEAVEILHEMERNGVQPNI-VSICTLLAACG- 490
Query: 417 HRTAEATQLVMDISSS---GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
R + ++ +S++ G++L+ Y++ I + ++ ++ A SL+R MR ++
Sbjct: 491 -RCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDP 549
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y +++G + + FLDE++ D ++ + ++S+I A+ K G++ +A+
Sbjct: 550 VTYNVLISGCCKMSKYGEALGFLDEMM-DLKIPLSKEVYSSVICAYSKQGQVTEAESMFT 608
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
+M + P+ TY ++I+ Y AE + ++ E++ TD ++ + + +
Sbjct: 609 KMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEME----TD---DVQPDSIACSSLM 661
Query: 594 YALVKGGFFDAVMQVVEKSQEMKV 617
A KGG V+ + E +E K+
Sbjct: 662 RAFNKGGQPAKVLVLAEFMREKKI 685
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 140/369 (37%), Gaps = 49/369 (13%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A KV E M +PN S+ L Y KGL + VE+ M G +V +L++
Sbjct: 428 AMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLA 487
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQ 357
+ G I L + + Y + +L G +L + +
Sbjct: 488 ACGRCGQ----KVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTK 543
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
K++P + + +IS C + +A LDEM + VY + AY K+
Sbjct: 544 KVKPDPVTYNV-----LISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQG 598
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+ EA + + G + DV Y A+I A +++++ A +LF +M + +
Sbjct: 599 QVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACS 658
Query: 478 TIMTGLMENHRPE---LMAAFLDEV------------------------------VEDPR 504
++M + +P ++A F+ E + +P
Sbjct: 659 SLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPS 718
Query: 505 VEVKTHDW-NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA---EQY 560
+ V + N ++H K+G++E + +++ E N TY L+ + A +Y
Sbjct: 719 ISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWRKY 778
Query: 561 FSVLMMWHE 569
VL W E
Sbjct: 779 IEVL-QWME 786
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 202/504 (40%), Gaps = 43/504 (8%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVH 146
A +F LT L P N+L+ H ++D + ++ P ++ F T
Sbjct: 133 ALSTFGKLTKLGLHPDVVTFNTLL-HGLCVEDRVSEALNLFHQMFETTCRPNVVTFTT-- 189
Query: 147 TLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD-ICRKNSNFVAF--LKVFEE 203
L+ + A AL+ M ++ P ++ G +VD +C+K A L+ EE
Sbjct: 190 -LMNGLCREGRIVEAVALLDRMMEDG-LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
I PN+ +A ++ C + SDA+ + M G+ P+ ++ +
Sbjct: 248 VSHII---------PNVVIYSAIIDSLCKDGRH-SDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+ G +L M E S +V Y++LI+ +VK G A L G +
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNL 381
+ TY ++ GF + + ++ ++ + P+ I + +I
Sbjct: 358 PNT----ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT-----LIDGYCGA 408
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
D +L EM G Y + + A L+ ++ SSGL D+
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGS------------YLTIMTGLMENHRP 489
D L++ + + A +F+ M++++ DL S Y +++GL+ N
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSK-KDLDASHPFNGVEPDVQTYNILISGLI-NEGK 526
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
L A L E + + T ++S+I CK RL++A + M F PN T+ +
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 550 LINGYVTAEQYFSVLMMWHEIKRK 573
LINGY A + L ++ E+ R+
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRR 610
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 117/295 (39%), Gaps = 23/295 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++G C G + + D +++ M+ G+ + +++ L + + L G ++
Sbjct: 393 PNLITFNTLIDGYC-GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA---------SRTILLCLGGGNMEQSDF 328
L M G +V +L+ G G L+ A S+ L N + D
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLS 384
+TY ++ G + G +EA++L GIV D +I
Sbjct: 512 --QTYNILISGLINEGK-------FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A + D M + S + + + YCK R + +L ++ G+ + Y L
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
I + A +F++M + +Y + ++TGL + A L+++
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 120/305 (39%), Gaps = 51/305 (16%)
Query: 341 LQNG--NVKGLAN---LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
LQ+G +KGL + L + + P VVD G++ V + D S+ +M
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVV---VRMERPDLVISLYQKME 106
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ + +K +C + A ++ GL DV ++ L+
Sbjct: 107 RKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVS 166
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP------------ 503
A +LF M E ++ T+M GL R A LD ++ED
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 504 -----------------RVEVKTH------DWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
++E +H +++II + CK GR DA+ M
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTDGQKGIKFEHNLVDAFLYALVKG 599
P+ TY S+I G+ ++ ++ + E ++RKIS D + + L++AF+ +G
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD----VVTYNALINAFVK---EG 339
Query: 600 GFFDA 604
FF+A
Sbjct: 340 KFFEA 344
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 151/381 (39%), Gaps = 57/381 (14%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEK------VIETMSVLGVRPNESSFGFLAYLYALK 269
+ P++ CN + L+++ DA + V E M LG+ P+ ++ L + +
Sbjct: 165 VAPDVKDCN-------HVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKE 217
Query: 270 GLQEKIVELESLMNEFGFS--SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
G ++K+ L M G V Y+ +I+G + G+LE A+ + G
Sbjct: 218 GRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELV-----EGMRLSKK 272
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
S TY ++ G L G VK + +L +E +E GI+ +I + GL + A
Sbjct: 273 ASSFTYNPLITGLLARGCVKKVYDLQLE---MENEGIMPTVVTYNAMIHGLLQSGLVEAA 329
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
EM A G + Y L YCK EA L D+ +GL V Y+ I+
Sbjct: 330 QVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDG 389
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE------ 501
D + A L +M E +Y +M G + + F DE++
Sbjct: 390 YCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPD 449
Query: 502 ----DPRV----------------EV--------KTHDWNSIIHAFCKAGRLEDAKRTLR 533
+ R+ EV T +N +IH CK G L+DAK
Sbjct: 450 CFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQM 509
Query: 534 RMIFLQFEPNDQTYLSLINGY 554
+M+ +P+ TY LI+ +
Sbjct: 510 KMVSNGLQPDCITYTCLIHAH 530
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 145/356 (40%), Gaps = 36/356 (10%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQS--VSDAEKVIETMSVLGVRPNESSFGFLAYLYAL 268
EN M P + NA + G LQS V A+ M +G+ P+ ++ L Y
Sbjct: 302 ENEGIM-PTVVTYNAMIHGL---LQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCK 357
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
G ++ + L + G + ++ Y+ I GY +LG+LE A R + +G EQ
Sbjct: 358 AGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEA-RILKEEMG----EQGCL 412
Query: 329 SKE-TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
TY ++KG L ++ E ++ L+P + + C L L D
Sbjct: 413 PNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRI-------CAELILGD 465
Query: 386 KAHSI-LDEMNAC-GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
A ++ L E+ G S Y + CK +A +L M + S+GLQ D Y
Sbjct: 466 IARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTC 525
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF------LD 497
LI A + A +F +M + ++ I+ R L +A+ L+
Sbjct: 526 LIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCR--RGNLYSAYGWFRKMLE 583
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
E VE + +N +IHA C+ GR + A M+ N TY LI+G
Sbjct: 584 EGVEPNEIT-----YNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDG 634
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 12/194 (6%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV--MDISSSGLQLDVGNYD 442
D ++ +EM G + Y L ++ KE R + L+ M+ SG + Y+
Sbjct: 186 DDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYN 245
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT---IMTGLMENHRPELMAAF-LDE 498
+I D + A L MR ++ K S T ++TGL+ R + + L
Sbjct: 246 VVITGLTRKGDLEEAAELVEGMRLSK----KASSFTYNPLITGLLA--RGCVKKVYDLQL 299
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+E+ + +N++IH ++G +E A+ M + P+ TY SL+NGY A
Sbjct: 300 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAG 359
Query: 559 QYFSVLMMWHEIKR 572
L+++ +++R
Sbjct: 360 NLKEALLLFGDLRR 373
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 176/430 (40%), Gaps = 39/430 (9%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++ +Y N+ + CC + A + M +G+ PN +S+ + KG
Sbjct: 403 VRMTVYPYNSLINCCCKK-DDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGA 461
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETY 333
VEL M E G + +++LI+G+ K ++ ASR M +S+ ++ T+
Sbjct: 462 VELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLF------NKMTESNLEPNEVTF 515
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA-CVNLGLSDKAHSILD 392
V++G+ G+++ L ++ G+ D +IS C+ G S + D
Sbjct: 516 NAVIEGYCLVGDIRKAFQLY---DQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVAD 572
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
N C + L +C+E R EA + +++ G +LD+ ++ ++ A++
Sbjct: 573 LENNCSVLNKFSL-TALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQH 631
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA-FLDEVVEDPRVEVKTHD 511
D + + LFR+M+E + + T M + + A DE++ D + T
Sbjct: 632 DSEKSCVLFREMKEKGVRP-DNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLP-NTVT 689
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT-------AEQYFSVL 564
+ ++++ CK+ L A+ + M+ F PN T+ ++ + T + YF++L
Sbjct: 690 YTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAML 749
Query: 565 MMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+G V+ + K G + ++ +S E F D Y
Sbjct: 750 ---------------QGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISY 794
Query: 625 KQAFMENHKK 634
E KK
Sbjct: 795 STVIHELCKK 804
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 129/327 (39%), Gaps = 48/327 (14%)
Query: 232 YGL---QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFS 288
YGL Q V +A V +M GV +E + L Y + + +E+ M GF
Sbjct: 240 YGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFV 299
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKG 348
S ++ G K G +E A R L C Q G ++
Sbjct: 300 PSEANCSFMLDGLRKKGRVEEAFR--LAC------------------------QLGELRM 333
Query: 349 LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
+ N+ L + C N G+ +A +++EM+ G Y
Sbjct: 334 VPNIFAYNALLN---------------NMCKN-GMFSEADRLVNEMSDKGLEPNEVTYAI 377
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ + CK +A ++ + G+++ V Y++LI D A +M E
Sbjct: 378 LIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIG 437
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+ SY ++ GL + +L A L + + V T+ + ++I+ FCKA ++++
Sbjct: 438 LTPNAASYSPVIAGLCR--KGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDE 495
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGY 554
A R +M EPN+ T+ ++I GY
Sbjct: 496 ASRLFNKMTESNLEPNEVTFNAVIEGY 522
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 138/376 (36%), Gaps = 52/376 (13%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N Y A + G C + + +A ++ M+ + PNE +F + Y L G K +L
Sbjct: 476 NTYTFTALINGFCKA-KKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQL 534
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK--ETYCEV 336
M G + Y SLISG LCL G + +F E C V
Sbjct: 535 YDQMMCRGLTPDNYTYRSLISG---------------LCLTDGASKAKEFVADLENNCSV 579
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG---------IISACVNLGLSDKA 387
+ F + G E + E + + ++ G I+ A + S+K+
Sbjct: 580 LNKFSLTALLHGFCR---EGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKS 636
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ EM G + + Y KE +A ++ + G + Y AL+
Sbjct: 637 CVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNN 696
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSY-------LTIMTGLMENHRP---ELMAAFLD 497
S SA L ++M + L SY G +E + ++ FL
Sbjct: 697 LCKSWHLSSAELLCKEMLASHF--LPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLA 754
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+V N++I FCK G++++A + R F P+ +Y ++I+
Sbjct: 755 NIVS----------VNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKK 804
Query: 558 EQYFSVLMMWHEIKRK 573
+ +W+E+ K
Sbjct: 805 GDINEAIELWNEMLYK 820
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 107/265 (40%), Gaps = 12/265 (4%)
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
+GI D+ I+ + V + A + D M G + VY ++AYC+
Sbjct: 156 AGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDG 215
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A LV + G ++ Y+ LI +Q + A + M + + + T++
Sbjct: 216 AKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVY 275
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS--IIHAFCKAGRLEDAKRTLRRMIFLQ 539
G R E + L+ + R+ + N ++ K GR+E+A R ++ L+
Sbjct: 276 GFC---RTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELR 332
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKG 599
PN Y +L+N M+ E R ++ KG++ +++L K
Sbjct: 333 MVPNIFAYNALLNNMCKNG-------MFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKR 385
Query: 600 GFFDAVMQVVEKSQEMKVFVDKWKY 624
G D + ++++ +E V + + Y
Sbjct: 386 GMMDDALCMLDRMREKGVRMTVYPY 410
>gi|56783835|dbj|BAD81247.1| fertility restorer -like [Oryza sativa Japonica Group]
Length = 1090
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 148/347 (42%), Gaps = 38/347 (10%)
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
++A +++ M G+ + +G L + Y GL K + +M + G ++ +V Y+++
Sbjct: 221 TEAAQLVREMEGKGLVGDAVLYGSLVHGYMSSGLLMKGLREHRVMLDKGIAADVVSYTTV 280
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
I G + E + ++ L N + + TY ++ GF + + +++ +
Sbjct: 281 IDGLCR----ERSVEKVMGFLDEMNRRDAKPNLITYTSLIGGFCKRNRLDDAFSIV---R 333
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
KLE +G+VVD V +I G D+A S+L+EM+ G +G+ Y + CK
Sbjct: 334 KLEQTGVVVDEYVYSILIDNLCKKGYLDRAFSLLEEMDKKGIKIGIVTYNSVINGLCKVG 393
Query: 418 RTAEATQL--------------------------VMDI----SSSGLQLDVGNYDALIEA 447
T +A ++ VM I SSG+ +DV + LI+A
Sbjct: 394 HTKKAVEIYEGIAADNFTYSTLLHGHIKVEDATGVMAIKGRLESSGVTIDVVTCNVLIKA 453
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ A SLF M E R+ +Y T++ + + + D+ ED
Sbjct: 454 LFMIKKVDDACSLFLRMPEMRLRPNIVTYHTVIDMMCKLGETDRALQLFDDYKEDILFS- 512
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
T N +I A C G++ A++ +I P+ TY LI+ +
Sbjct: 513 STIVHNCLIIALCNGGKVNMAEQIFNDLIQRNLRPDSCTYKKLIHTH 559
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 116/281 (41%), Gaps = 26/281 (9%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQN 343
G+S + YS L+ G K G LE A + LC +M++ + V+ G Q
Sbjct: 716 GYSVDLAMYSILVEGLCKSGYLEKA---LDLC---ESMKEEGIQPNIVIHNSVLNGLCQQ 769
Query: 344 GNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
G + L +E+ ++ P+ +V S+ +I+A G D AH + +M+ G
Sbjct: 770 GCLTEAFRLFDYLESSEVLPT--LVTYSI---LIAALCREGFLDDAHELFQKMSTKGIKP 824
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
VY + YC T +A +L+ L D A+I D +SA F
Sbjct: 825 TTRVYNLLISGYCNYGLTEKALELISHFEEIFLFPDAITIGAIINGHCLKGDIESALGFF 884
Query: 462 RD-MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV---------EVKTHD 511
+ + + D G +++++ GL R E + L E+ + V +++
Sbjct: 885 SEYYHKEMVPDFVG-FMSLVKGLYAKGRMEESRSILREMFQCKEVAEFINSVGDKIQAES 943
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+ ++ + C+ GR+++ L + + +D S ++
Sbjct: 944 FVGLLFSACEQGRIDEVVTILNEVALMSVSSSDSNNCSTLS 984
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 22/282 (7%)
Query: 192 SNFVAFLKVFEECCRIA--------LDE-NLDFMKPNIYACNAALEGCCYGLQSVSDAEK 242
++ V++ V + CR LDE N KPN+ + + G C + DA
Sbjct: 272 ADVVSYTTVIDGLCRERSVEKVMGFLDEMNRRDAKPNLITYTSLIGGFCK-RNRLDDAFS 330
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
++ + GV +E + L KG ++ L M++ G +V Y+S+I+G
Sbjct: 331 IVRKLEQTGVVVDEYVYSILIDNLCKKGYLDRAFSLLEEMDKKGIKIGIVTYNSVINGLC 390
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
K+G+ + A I + N TY ++ G ++ + G+ + +LE S
Sbjct: 391 KVGHTKKAVE-IYEGIAADNF--------TYSTLLHGHIKVEDATGVMAI---KGRLESS 438
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G+ +D +I A + D A S+ M + Y + CK T A
Sbjct: 439 GVTIDVVTCNVLIKALFMIKKVDDACSLFLRMPEMRLRPNIVTYHTVIDMMCKLGETDRA 498
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
QL D L ++ LI A A +F D+
Sbjct: 499 LQLFDDYKEDILFSSTIVHNCLIIALCNGGKVNMAEQIFNDL 540
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ DA ++ + MS G++P + L Y GL EK +EL S E + +
Sbjct: 807 LDDAHELFQKMSTKGIKPTTRVYNLLISGYCNYGLTEKALELISHFEEIFLFPDAITIGA 866
Query: 297 LISGYVKLGNLESA 310
+I+G+ G++ESA
Sbjct: 867 IINGHCLKGDIESA 880
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 171/384 (44%), Gaps = 56/384 (14%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ + + TM G++PN S+ L YA G+ ++ + + + + GF +V Y+S
Sbjct: 355 IENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTS 414
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
L++ Y K G E A M+ + + +C
Sbjct: 415 LLNAYGKSGKPEKA------------MKVFELMRRNHC---------------------- 440
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+P+ + + +I A + GL +A IL EM G + V + TL A C
Sbjct: 441 ---KPNLVSYN-----ALIDAYGSKGLLTEAVEILHEMERNGVQPNI-VSICTLLAACG- 490
Query: 417 HRTAEATQLVMDISSS---GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
R + ++ +S++ G++L+ Y++ I + ++ ++ A SL+R MR ++
Sbjct: 491 -RCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDP 549
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y +++G + + FLDE++ D ++ + ++S+I A+ K G++ +A+
Sbjct: 550 VTYNVLISGCCKMSKYGEALGFLDEMM-DLKIPLSKEVYSSVICAYSKQGQVTEAESMFT 608
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
+M + P+ TY ++I+ Y AE + ++ E++ TD ++ + + +
Sbjct: 609 KMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEME----TD---DVQPDSIACSSLM 661
Query: 594 YALVKGGFFDAVMQVVEKSQEMKV 617
A KGG V+ + E +E K+
Sbjct: 662 RAFNKGGQPAKVLVLAEFMREKKI 685
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 140/369 (37%), Gaps = 49/369 (13%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A KV E M +PN S+ L Y KGL + VE+ M G +V +L++
Sbjct: 428 AMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLA 487
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQ 357
+ G I L + + Y + +L G +L + +
Sbjct: 488 ACGRCGQ----KVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTK 543
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
K++P + + +IS C + +A LDEM + VY + AY K+
Sbjct: 544 KVKPDPVTYNV-----LISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQG 598
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+ EA + + G + DV Y A+I A +++++ A +LF +M + +
Sbjct: 599 QVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACS 658
Query: 478 TIMTGLMENHRPE---LMAAFLDEV------------------------------VEDPR 504
++M + +P ++A F+ E + +P
Sbjct: 659 SLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPS 718
Query: 505 VEVKTHDW-NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA---EQY 560
+ V + N ++H K+G++E + +++ E N TY L+ + A +Y
Sbjct: 719 ISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWRKY 778
Query: 561 FSVLMMWHE 569
VL W E
Sbjct: 779 IEVL-QWME 786
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 169/427 (39%), Gaps = 58/427 (13%)
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG 233
F+P E LVD RK N + + + + + P+++ NA + C
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV-------APSLFVYNALINSMCKD 368
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
+ +AE + M G+ PN+ ++ L + +G + + M E G + +
Sbjct: 369 -GKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYP 427
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
YSSLISG+ KLG L +A K + E++
Sbjct: 428 YSSLISGHCKLGKLRAA-------------------KSLFDEMI---------------- 452
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
A L+P+ ++ +IS G A + EM G S + +
Sbjct: 453 --ANGLKPNVVIYT-----SLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C +R AEA +L ++ + + Y+ LIE + AF L +M E +
Sbjct: 506 CHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDT 565
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y +++GL R F+++ ++ + ++ +++++H +CK GRL+DA R
Sbjct: 566 YTYRPLISGLCSTGRVSEAREFMND-LQGEQQKLNEMCFSALLHGYCKEGRLDDALDACR 624
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
M+ + Y LI G + + S++ + ++ +G++ ++ L +
Sbjct: 625 EMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMH-------DQGLRPDNVLYTTMI 677
Query: 594 YALVKGG 600
A K G
Sbjct: 678 DANAKAG 684
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 136/315 (43%), Gaps = 8/315 (2%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
E+++ M G P+E++ L KG +L + + +FG + + Y++LI+
Sbjct: 304 GEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALIN 363
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
K G L+ A ++ +G + +D TY ++ F + G + + + K+
Sbjct: 364 SMCKDGKLDEAE-SLFNNMGHKGLFPNDV---TYSILIDSFCKRGKLDVALHFL---GKM 416
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
GI +IS LG A S+ DEM A G + +Y + YCKE
Sbjct: 417 TEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGEL 476
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A +L +++ G+ + + ALI + A LF +M E + + +Y +
Sbjct: 477 HNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL 536
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ G + LDE+VE V T+ + +I C GR+ +A+ + + Q
Sbjct: 537 IEGHCKEGNTVRAFELLDEMVEKGLVP-DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQ 595
Query: 540 FEPNDQTYLSLINGY 554
+ N+ + +L++GY
Sbjct: 596 QKLNEMCFSALLHGY 610
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 170/452 (37%), Gaps = 87/452 (19%)
Query: 204 CCRIALDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
C R LD L F+ K +Y ++ + G C L + A+ + + M G++PN
Sbjct: 401 CKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHC-KLGKLRAAKSLFDEMIANGLKPN 459
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
+ L Y +G L M G S +++LISG + A++
Sbjct: 460 VVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANK--- 516
Query: 316 LCLGGGNMEQSDFSKE-TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
L G +E + E TY +++G + GN L+ E + G+V D +
Sbjct: 517 --LFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE---MVEKGLVPDTYTYRPL 571
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
IS + G +A ++++ + + L YCKE R +A ++ G+
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMRE-----------------ARIYDLKG--- 474
+D+ Y LI + QD +S L + M + A+ +LK
Sbjct: 632 AMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFG 691
Query: 475 ---------------SYLTIMTGLME---NHRPELM----------------AAFLDEVV 500
+Y ++ GL + + EL+ A FLD +
Sbjct: 692 LWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLT 751
Query: 501 EDPRVE--VKTHD------------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ +E ++ HD +N +I FCK GR+++A L MI P+ +
Sbjct: 752 SEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCIS 811
Query: 547 YLSLINGYVTAEQYFSVLMMWHE-IKRKISTD 577
Y ++I Y + +W + R ++ D
Sbjct: 812 YSTIIYEYCRRGDLKEAIKLWESMLNRGVNPD 843
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
SG+ D V ++ + L +A ++ M + GC + + Y ++ CK R E
Sbjct: 209 SGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWE 268
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A ++ +S GL+ DVG Y L+ ++F++ + +M E + + ++
Sbjct: 269 AVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVD 328
Query: 482 GLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL + + + +AF L V+ V +N++I++ CK G+L++A+ M
Sbjct: 329 GLRK--KGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGL 386
Query: 541 EPNDQTYLSLINGY 554
PND TY LI+ +
Sbjct: 387 FPNDVTYSILIDSF 400
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 136/345 (39%), Gaps = 28/345 (8%)
Query: 239 DAEKVIETMSVLGVRPNESSF-GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
D V+ M G+ P + G L L ++ + + + +++ G + Y+++
Sbjct: 163 DGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSS-GLRPDVYVYTAV 221
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQS--DFSKETYCEVVKGFLQNGNVKGLANLIIE 355
+ +L + A I G ME S D S TY ++G +N V +
Sbjct: 222 VRSLCELKDFIRAREVI------GRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEI--- 272
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC- 414
L G+ D ++ + + +++EM G +VP+ A
Sbjct: 273 KNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFG-------FVPSEAAVSN 325
Query: 415 ------KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
K+ A LV + G+ + Y+ALI + A SLF +M
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKG 385
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
++ +Y ++ + + ++ FL ++ E ++ + ++S+I CK G+L A
Sbjct: 386 LFPNDVTYSILIDSFCKRGKLDVALHFLGKMTE-VGIKATVYPYSSLISGHCKLGKLRAA 444
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
K MI +PN Y SLI+GY + + ++HE+ K
Sbjct: 445 KSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGK 489
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 181/468 (38%), Gaps = 32/468 (6%)
Query: 91 FKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVV-YVIEKNPKLLDFQTVHTLL 149
F + AN L P+ + SLI+ + HN R + + I N T L+
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT-----YTFTALI 502
Query: 150 GSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIAL 209
+ +AN A A L M + +P E+ L++ K N V ++ +E L
Sbjct: 503 SGLCHANRMAEANKLFGEMVEWN-VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561
Query: 210 DENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALK 269
P+ Y + G C VS+A + + + + NE F L + Y +
Sbjct: 562 -------VPDTYTYRPLISGLC-STGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKE 613
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
G + ++ M G + +V YS LI G ++ + R+I+ L + +
Sbjct: 614 GRLDDALDACREMLGRGVAMDLVCYSVLIYGILR----QQDRRSIIDLLKQMHDQGLRPD 669
Query: 330 KETYCEVVKGFLQNGNVK---GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
Y ++ + GN+K GL ++++ G + + +I+ +GL DK
Sbjct: 670 NVLYTTMIDANAKAGNLKMAFGLWDIMVS------EGCLPNVVTYTALINGLCKIGLMDK 723
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + EM A Y L E +A QL D+ G + Y+ LI
Sbjct: 724 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIR 782
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRV 505
Q A + +M ++ I SY TI+ R +L A L E + + V
Sbjct: 783 GFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCR--RGDLKEAIKLWESMLNRGV 840
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
T +N +I+ C G L A M+ +PN TY SLI+G
Sbjct: 841 NPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 136/340 (40%), Gaps = 47/340 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN+ N ++ C G + A + E M GV P+ +F L + + L E
Sbjct: 266 KPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQ 325
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
+ + M G + Y++LI K G +E A+ + +M + S TY
Sbjct: 326 RVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIM------SSMRLKNISPNVVTYS 379
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G+ G + I ++ SG+ DR +I LG D A + +M
Sbjct: 380 TMIDGY---GKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDM 436
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + Y + AY K+ + +A L + + GL +V Y ALI+A +
Sbjct: 437 ERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMH 496
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
Q A S+F + + A + +P+++ ++S
Sbjct: 497 QDATSIFVEFKRAGL------------------KPDVVL------------------YSS 520
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+I + CK G +EDA L+ M +PN TY SLI+ Y
Sbjct: 521 LIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY 560
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 142/333 (42%), Gaps = 23/333 (6%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQN 343
GF + + YS+++S Y + G A + M+++ TY ++ +
Sbjct: 229 GFGNNVYAYSAMVSAYGRSGRCREALKVFQA------MKKAGCKPNLITYNTIIDACGKG 282
Query: 344 G-NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
G ++K ++ E QK G+ DR +I+ C L + + + EM G
Sbjct: 283 GVDLKKALDIFEEMQK---EGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQD 339
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+ Y + A CK + A ++ + + +V Y +I+ F+ A L+
Sbjct: 340 IFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYH 399
Query: 463 DMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
DM+E+ + + SY T++ + R + + A D + +V T+ N++I A+ K
Sbjct: 400 DMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTY--NALIDAYGK 457
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKG 581
G+ +DA +M PN TY +LI+ Y A + ++ E KR G
Sbjct: 458 QGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKR-------AG 510
Query: 582 IKFEHNLVDAFLYALVKGGFF-DAVMQVVEKSQ 613
+K + L + + + K G DAV+ + E +Q
Sbjct: 511 LKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQ 543
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 134/331 (40%), Gaps = 34/331 (10%)
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+D E V + M ++PN +F + G K ++ M +G S +V Y++L
Sbjct: 205 ADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTL 264
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSD-FSKE-----------TYCEVVKGFLQNGN 345
I GY KLG G G M ++D KE T+ ++ GF ++ N
Sbjct: 265 IDGYCKLG-------------GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDN 311
Query: 346 VKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
+ G + E Q ++P+ I + +I+ N G +A S+ D+M + G L
Sbjct: 312 LPGSMKVFKEMLDQDVKPNVISYN-----SLINGLCNGGKISEAISMRDKMVSAGVQPNL 366
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y + +CK EA + + G Y+ LI+A F+L +
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M I G+Y ++ GL N E D++ ++ T ++ ++ +C+ G
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVT--FHILMEGYCRKG 484
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
A L+ M + +P TY ++ GY
Sbjct: 485 ESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 145/368 (39%), Gaps = 43/368 (11%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN++ N + C ++ A V+E M V G PN S+ L Y G K+
Sbjct: 219 IQPNVFTFNVVINALC-KTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTIL----------------- 315
+ ++++ E S + ++ LI G+ K NL + +
Sbjct: 278 YKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337
Query: 316 ---LCLGGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLI--IEAQKL 359
LC GG E + TY ++ GF +N +K ++ ++ Q
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
P+ + + +I A LG D ++ +EM G +G Y + C+
Sbjct: 398 VPTTRMYNM-----LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A +L ++S GL D+ + L+E + + A L ++M + + +Y +
Sbjct: 453 EAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIV 511
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
M G + + ++ ++ R+ + +N ++ + + G+LEDA L M+
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571
Query: 540 FEPNDQTY 547
PN TY
Sbjct: 572 LVPNRITY 579
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 95/225 (42%), Gaps = 48/225 (21%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK---EHRTAEATQLVMDIS 430
+I+A G +KA ++++M GCS + Y + YCK + +A ++ ++
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
+ + ++ ++ LI+ + + +F++M L ++ +P
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM------------------LDQDVKPN 330
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+++ +NS+I+ C G++ +A +M+ +PN TY +L
Sbjct: 331 VIS------------------YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 551 INGYVTAEQYFSVLMMWHEIKRKISTDGQKGI---KFEHNLVDAF 592
ING+ + L M+ +K GQ + + + L+DA+
Sbjct: 373 INGFCKNDMLKEALDMFGSVK------GQGAVPTTRMYNMLIDAY 411
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 144/339 (42%), Gaps = 20/339 (5%)
Query: 222 ACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESL 281
+CN L + A +V S +GV N S+ + +L G K+ E SL
Sbjct: 218 SCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLG---KVKEAHSL 274
Query: 282 MNEFGFSS---QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
+ + F +V YS ++ GY ++ L + ++ L ++ + + TY ++
Sbjct: 275 LIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLK-LMEELQRKGLKPNQY---TYNSIIS 330
Query: 339 GFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSILDEMN 395
+ G V + +++ Q++ P +V + GFG G + + DEM
Sbjct: 331 FLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFG------KSGNVSVEYKLFDEMK 384
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
Y + C+ + EA +L ++ S GL+ D Y ALI+ + + +
Sbjct: 385 RKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMK 444
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
AFSL M E + +Y ++ GL + ++ L E+ E ++ +N++
Sbjct: 445 EAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG-LQPNVCTYNAL 503
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
I+ CK G +E A + + M F P+ TY ++++ Y
Sbjct: 504 INGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAY 542
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
I+ LG +AHS+L +M G + Y + YC+ + + +L+ ++ G
Sbjct: 258 ILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKG 317
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
L+ + Y+++I + A + R M+ RI+ Y T+++G ++ +
Sbjct: 318 LKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEY 377
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
DE+ + ++ + S+IH C+AG++ +A++ M+ +P++ TY +LI+G
Sbjct: 378 KLFDEM-KRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDG 436
Query: 554 YVTA 557
Y A
Sbjct: 437 YCKA 440
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 182/459 (39%), Gaps = 72/459 (15%)
Query: 198 LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE- 256
LK+ EE R L KPN Y N+ + C V +AE+V+ M + P+
Sbjct: 307 LKLMEELQRKGL-------KPNQYTYNSIISFLC-KTGRVVEAEQVLRVMKNQRIFPDNV 358
Query: 257 ------SSFG-----------------------FLAYLYALKGLQE--KIVELESLMNEF 285
S FG F+ Y + GL + K+VE L +E
Sbjct: 359 VYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM 418
Query: 286 ---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGF 340
G V Y++LI GY K G ++ A M + + TY +V G
Sbjct: 419 LSKGLKPDEVTYTALIDGYCKAGEMKEAFSL------HNQMVEKGLTPNVVTYTALVDGL 472
Query: 341 LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
+ G V +AN ++ ++ G+ + +I+ +G ++A +++EM+ G
Sbjct: 473 CKCGEVD-IANELL--HEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFF 529
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
Y + AYCK A+A +L+ + GLQ + ++ L+ S + L
Sbjct: 530 PDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERL 589
Query: 461 FRDMREARIYDLKGSYLTIMTG--LMENHRPEL---MAAFLDEVVEDPRVEVKTHDWNSI 515
+ M + I ++ ++M + N R + VV D T+ +N +
Sbjct: 590 IKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPD------TNTYNIL 643
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I CKA +++A + M+ F +Y SLI G+ +++ ++ E++
Sbjct: 644 IKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMR---- 699
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
G E + D F+ + G ++ +++ +++ E
Sbjct: 700 ---THGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIE 735
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
T +N I+H C+ G++++A L +M F P+ +Y +++GY EQ VL +
Sbjct: 252 TVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLME 311
Query: 569 EIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
E++RK G K ++ +N + +F L K G QV+ + ++F D Y
Sbjct: 312 ELQRK----GLKPNQYTYNSIISF---LCKTGRVVEAEQVLRVMKNQRIFPDNVVY 360
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Query: 181 GGFLVDICRKNSNFVAFLKVFE-----ECCRIALDENLDFMKPNIYACNAALEGCCYGLQ 235
GF D + A+ K+ E E RI LD+ L +P I N + G C
Sbjct: 526 AGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGL---QPTIVTFNVLMNGFCMS-G 581
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+ D E++I+ M G+ PN ++F L Y ++ +E+ M+ G Y+
Sbjct: 582 MLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYN 641
Query: 296 SLISGYVKLGNLESA 310
LI G+ K N++ A
Sbjct: 642 ILIKGHCKARNMKEA 656
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 28/348 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL---- 271
M N + CN + G C G + +A ++E+M + P+ ++ L ++GL
Sbjct: 146 MSVNKFTCNIWIRGLCEG-GRLEEAVALVESMDAY-IAPDVVTYNTL-----MRGLCKDS 198
Query: 272 --QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
QE L +MN+ G Y+++I GY K L+ A+ + + G +
Sbjct: 199 KVQEAAQYLRRMMNQ-GCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPD---- 253
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQ--KLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
+ TYC ++ G G+V+ L EAQ L+P +V + ++ GL A
Sbjct: 254 RVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYN-----SLVKGLCRQGLILHA 308
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+++EM GC + Y + CK ++A ++ D G DV ++ +I+
Sbjct: 309 LQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDG 368
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP-ELMAAFLDEVVEDPRVE 506
SA L M I +Y +++ GL + + E+ F + +++ R
Sbjct: 369 YCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN 428
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
T +N +I FCK +LE+A + RM P+ ++ +LI+G+
Sbjct: 429 AIT--YNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGF 474
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 9/216 (4%)
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
L A C++ E+ L+ + G+ ++ + I + A +L M +A
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAY 179
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
I +Y T+M GL ++ + + A +L ++ + +N+II +CK L++A
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIP-DDFTYNTIIDGYCKRDMLQEA 238
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
L+ IF F P+ TY SLING L +++E + K +K + +
Sbjct: 239 TELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQ-------AKDLKPDLVV 291
Query: 589 VDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
++ + L + G +QV+ + E D W Y
Sbjct: 292 YNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTY 327
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/430 (19%), Positives = 163/430 (37%), Gaps = 66/430 (15%)
Query: 207 IALDENLD-FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
+AL E++D ++ P++ N + G C V +A + + M G P++ ++ +
Sbjct: 170 VALVESMDAYIAPDVVTYNTLMRGLCKD-SKVQEAAQYLRRMMNQGCIPDDFTYNTIIDG 228
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------------- 310
Y + + ++ EL GF V Y SLI+G G++E A
Sbjct: 229 YCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPD 288
Query: 311 -----SRTILLCLGGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLA---- 350
S LC G + E TY V+ G + GN+ A
Sbjct: 289 LVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMN 348
Query: 351 --------------NLIIEAQ----KLEPSGIVVDRSVGFGI----------ISACVNLG 382
N +I+ KL+ + +V+R +GI ++ G
Sbjct: 349 DAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAG 408
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+ + + +EM GC Y ++ +CK ++ EA+ +++ +S GL D +++
Sbjct: 409 KAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFN 468
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
LI + D A+ LF+ + E + Y I+ G + MA + +
Sbjct: 469 TLIHGFCRNGDLDGAYLLFQKLDE-KGYSATADTFNILIGAYSSKLNMQMAEKIFGEMIS 527
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+ + + ++ CKA ++ A L M+ F P+ T+ ++N +
Sbjct: 528 KGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSE 587
Query: 563 VLMMWHEIKR 572
+ + H + R
Sbjct: 588 AVAIIHIMVR 597
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 104/487 (21%), Positives = 189/487 (38%), Gaps = 71/487 (14%)
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
F ++ L +R+ A +AL++ R P + G LV+ K L+V
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVR---PDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETM--SVLGVRPNESSF 259
+ R LD ++P++ N ++G C + V +A +E SV G PN ++
Sbjct: 196 DGMSRQDLD-----IRPDVVTLNTVVDGLCKSGR-VQEALAFVEQRMSSVHGCPPNTVTY 249
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA------SRT 313
L + G EL M G +V ++++ G + G +A RT
Sbjct: 250 NCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT 309
Query: 314 ILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG 373
+ G GN TY +V L NV G+A + + E G D + F
Sbjct: 310 VWP-EGKGN-------AVTYSTLVGALLHTNNV-GMAMELFHEKMSE--GHSPDAIMYFT 358
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+IS G + A S+ M G + Y + +C++ R EA +L+ ++ G
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ DV Y+ L+ S + DF + L M + G +++T
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMID------DGCQPSVIT------------ 460
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ +++H +CK G++++A R LR M PN+ Y +LI+
Sbjct: 461 ------------------FGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDF 502
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
+ ++ E+K +K + +A L L + +++++ +
Sbjct: 503 LCKRGDVDLAIELFDEMK-------EKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMR 555
Query: 614 EMKVFVD 620
E + F D
Sbjct: 556 EERCFPD 562
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 135/344 (39%), Gaps = 62/344 (18%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESAS--------RTILLCLGGGNMEQSDFSKETYCEVV 337
G +VFY++LI GY K G+ E A+ + L + + F K+ EVV
Sbjct: 202 GCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVV 261
Query: 338 KGFLQNGNVKGLA------NLIIEAQKLEPSGIVVDRSVGFGIISAC------------- 378
L + +GL N II+AQ I +VG+ I S C
Sbjct: 262 DKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITG 321
Query: 379 -VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
+ G KA +L++ G Y P + YCK+ A L++ +S G + D
Sbjct: 322 SCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPD 381
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR----PELMA 493
+ Y ALI I + + A ++ M E + Y +M+GL + R L+A
Sbjct: 382 LVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLA 441
Query: 494 AFLDE-VVEDPRVEVKTHD-----------------------------WNSIIHAFCKAG 523
LD+ V D + D +N++I +CK G
Sbjct: 442 EMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFG 501
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
++DA +RMI P++ TY ++I+GY+ L M+
Sbjct: 502 MMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMF 545
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 142/360 (39%), Gaps = 18/360 (5%)
Query: 201 FEECCRIALDENLDFM-----KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
F+ CRI + + +M P++ N + G C V AE+++E G+ PN
Sbjct: 288 FKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSC-SCGEVHKAEQLLEQAIKRGLLPN 346
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
+ S+ L + Y +G + ++L M+E G +V Y++LI G + G ++ A
Sbjct: 347 KVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRN 406
Query: 316 LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFG 373
+ G + ++ Y ++ G + G + L+ E Q + P D +
Sbjct: 407 KMVEKGVLPDANI----YNVLMSGLCKKGRLPAAKVLLAEMLDQNVAP-----DAFITAT 457
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++ + G ++A + + G G+ Y +K YCK +A +
Sbjct: 458 LVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGL 517
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
D Y +I+ I D A +F M + +Y ++ G +
Sbjct: 518 HSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAE 577
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+++ R++ + +I FCK L A +M+ + PND TY L+NG
Sbjct: 578 KTFKQMLS-LRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNG 636
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 158/375 (42%), Gaps = 30/375 (8%)
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF-YSS 296
S+ E +++ M + P +F + ++A GL ++ +E + VF +S
Sbjct: 83 SEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNS 142
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE----TYCEVVKGFLQNGNVKGLANL 352
L++ VK G +E A + E D + E T C +VKG + G V+ L
Sbjct: 143 LLNVLVKHGKVEIACKVY--------DEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKL 194
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
I +K G + + +I G +++A+ + E+ G + Y +
Sbjct: 195 I---EKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIING 251
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
+CK+ + +L++++S GL + + Y+ +I+A A M ++
Sbjct: 252 FCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPD 311
Query: 473 KGSYLTIMTG---LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+Y ++TG E H+ E L++ ++ + K + +IH +CK G A
Sbjct: 312 MATYNILITGSCSCGEVHKAE---QLLEQAIKRGLLPNKV-SYTPLIHNYCKQGEYLRAL 367
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
L +M +P+ TY +LI+G + A + L + +++ +KG+ + N+
Sbjct: 368 DLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMV-------EKGVLPDANIY 420
Query: 590 DAFLYALVKGGFFDA 604
+ + L K G A
Sbjct: 421 NVLMSGLCKKGRLPA 435
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 127/552 (23%), Positives = 222/552 (40%), Gaps = 81/552 (14%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLI-AHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQ 143
++A + F + A L PS N+LI + + + K IE P L+ F
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIE--PSLITF- 287
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
+TLL + A A ++K M K+ F+P L D N A L V+E
Sbjct: 288 --NTLLKGLFKAGMVEDAENVLKEM-KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE- 343
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
A+D + K N Y C+ L C + AE+++ G+ PNE + +
Sbjct: 344 ---TAVDSGV---KMNAYTCSILLNALCKE-GKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 264 YLYALKG-LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI-------- 314
Y KG L +++E+ M + G + Y+ LI + +LG +E+A + +
Sbjct: 397 DGYCRKGDLVGARMKIEA-MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455
Query: 315 ------LLCLGGGNMEQSDFSKETYC-EVVKGFLQNG---NVKGLANLI---------IE 355
L GG + +F K C +++K NG NV LI +E
Sbjct: 456 SPSVETYNILIGGYGRKYEFDK---CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 356 AQ----KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
AQ +E G+ + +I C + G + A EM G + L Y +
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
+ +EA L+++IS GL+ DV Y++LI + + Q +L+ +M+ + I
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Query: 472 LKGSYLTIMT-----GLMENHR--------PELMA----------------AF-LDEVVE 501
+Y +++ G+ R P+L+ AF L + +
Sbjct: 633 TLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMI 692
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
+ + + +NS+I K G+L + + + M + EP TY ++ G+ + Y
Sbjct: 693 EKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYM 752
Query: 562 SVLMMWHEIKRK 573
S + + E++ K
Sbjct: 753 SAYVWYREMQEK 764
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
+ A + DEM A L Y + YCK ++ ++ + + ++ + ++ L
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
++ + + A ++ ++M++ ++ + G N + E + V D
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV-DSG 349
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
V++ + + +++A CK G++E A+ L R + PN+ Y ++I+GY
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 565 MMWHEIKRKISTDGQKGIKFEH 586
M KI ++G+K +H
Sbjct: 410 M-------KIEAMEKQGMKPDH 424
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 142/350 (40%), Gaps = 30/350 (8%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+ + NA L G G + V AEK + V P+ +F + G K
Sbjct: 153 RPSTSSVNALLAGL-VGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF-------- 328
++ + +G + + Y+SLI GY K G G GNM D
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKG-------------GAGNMYHVDMLLKEMVEA 258
Query: 329 ----SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
+ T+ ++ G+ +N N + ++++ GI +IS + G
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVF---EEMKQQGIAASVVTYNSLISGLCSEGKV 315
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
++ +++EM G S + LK +CK+ A+A + ++ ++ DV Y+ L
Sbjct: 316 EEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNIL 375
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I+ + A ++ M + I +Y ++TG + + LDE+ E
Sbjct: 376 IDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK-G 434
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+E +N +I A C G + A + L M + EPN TY ++I G+
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 160/381 (41%), Gaps = 29/381 (7%)
Query: 189 RKNSNFVAFLKVFEECCRIA-LDENLDFMK--------PNIYACNAALEGCCY--GLQSV 237
R + + F V CRI L + D K P++ N+ ++G C G ++
Sbjct: 186 RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNM 245
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+ +++ M G+ P +FG L Y V + M + G ++ +V Y+SL
Sbjct: 246 YHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSL 305
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI-- 353
ISG G +E + + ME S T+ V+KGF + G + + I
Sbjct: 306 ISGLCSEGKVEEGVKLM------EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ + +EP ++ + +I LG + A ++ + M G S + Y + +
Sbjct: 360 MTERNVEPDVVIYNI-----LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
+ A+ L+ ++ G++ DV Y+ LI A + + A L +M E +
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNH 474
Query: 474 GSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+Y TI+ G + + + +A+ + +E R +N I FC+ G++++A L
Sbjct: 475 LTYNTIIQGFCD--KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLL 532
Query: 533 RRMIFLQFEPNDQTYLSLING 553
M+ PN TY ++ G
Sbjct: 533 NEMLDKCLVPNGITYETIKEG 553
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 139/331 (41%), Gaps = 20/331 (6%)
Query: 176 PFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ 235
P + G L++ KNSN A ++VFEE + + ++ N+ + G C
Sbjct: 262 PTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGI-------AASVVTYNSLISGLC-SEG 313
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
V + K++E M LG+ PNE +FG + + KG+ + M E +V Y+
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYN 373
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI 353
LI Y +LG +E A M + S TY ++ GF ++G+ + + L+
Sbjct: 374 ILIDVYRRLGKMEDAMAV------KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
E ++ GI D +I A G KA +LDEM+ G Y ++ +
Sbjct: 428 DE---MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C + A ++ + + +V Y+ I+ A L +M + +
Sbjct: 485 CDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNG 544
Query: 474 GSYLTIMTGLME-NHRPELMAAFLDEVVEDP 503
+Y TI G+ME + P++ + + E+P
Sbjct: 545 ITYETIKEGMMEKGYTPDIRGCTVSQASENP 575
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 133/329 (40%), Gaps = 32/329 (9%)
Query: 332 TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
T+ V+ G + G ++ ++ I+A L PS + S+ I C G + H
Sbjct: 193 TFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPS-VATYNSL---IDGYCKKGGAGNMYHV 248
Query: 390 --ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+L EM G S + + YCK TA A ++ ++ G+ V Y++LI
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ + L +M + + + ++ ++ G + ++D + E VE
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER-NVEP 367
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N +I + + G++EDA M PN TY LI G+ + + S +
Sbjct: 368 DVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV---------- 617
E+K +KGI+ + + + AL G ++++++ E+ +
Sbjct: 428 DEMK-------EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Query: 618 ---FVDKWKYKQAFMENHKKLKVAKLRKR 643
F DK K A+ + ++ K RKR
Sbjct: 481 IQGFCDKGNIKSAY---EIRTRMEKCRKR 506
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 96/463 (20%), Positives = 193/463 (41%), Gaps = 46/463 (9%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T TL+ + + A L+ M ++R P + L+ C K F ++V
Sbjct: 192 DRITYSTLMCGLAKQDRLDHALDLLDEMPRSR-VQPDVVCYNALLGGCFKAGEFEKVMRV 250
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
++ ++ D +PN+ N L+G C + +V E M ++P+ ++G
Sbjct: 251 WD---KLVKDPG---ARPNLATYNVMLDGLC-KFGRFKEVGEVWERMVANNLQPDVITYG 303
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA---------- 310
L + G + + S + + G Y+SL+ G+ + G ++ A
Sbjct: 304 ILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFA 363
Query: 311 ----SRTILLCLGG----GNMEQSD-----FSKETYC--------EVVKGFLQNGNVKGL 349
RT + + G G ++++ K+ C ++ G QNG
Sbjct: 364 GLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKA 423
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
+ EA+ SG +D +I+ N+G A + ++M+ GC +Y
Sbjct: 424 FTIFEEARV---SGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ +C+ +RT++A ++ ++ +G V Y+ LI+ ++ +Q A S+ R+M E
Sbjct: 481 ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGF 540
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVV-EDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
+Y +++ GL + + + + +++ + +V+V H N +IH C AG++++A
Sbjct: 541 TPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMH--NILIHGLCSAGKVDEA 598
Query: 529 KRTLRRMIFLQ-FEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
M + PN TY +L++G +W I
Sbjct: 599 LHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSI 641
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 93/242 (38%), Gaps = 52/242 (21%)
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG----LQLDVGNYDALIEASITSQD 453
GC+ G+ + L A+ + R ++A +S + ++ Y+ ++ + D
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE--------------- 498
A +LF +R ++ + +Y T+M GL + R + LDE
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233
Query: 499 --------------------VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+V+DP +N ++ CK GR ++ RM+
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY-ALV 597
+P+ TY LI+G + ++ EI + G+ ++DA +Y +LV
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK-------TGL-----VIDAAMYNSLV 341
Query: 598 KG 599
KG
Sbjct: 342 KG 343
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 98/249 (39%), Gaps = 21/249 (8%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-- 271
D KPN + NA + G C + SDA ++ M+ G P ++ L + GL
Sbjct: 468 DGCKPNSHIYNALISGFCQ-VYRTSDAVRIYSKMADNGCSPTVITYNTL-----IDGLCK 521
Query: 272 QEKIVELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
EK E S+ M E GF+ + Y SLI G ++ A L G + D
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG--LKVDV 579
Query: 329 SKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
++ G G V ++ ++ +K P +V ++ G+ G DK
Sbjct: 580 MMHNI--LIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYET----GYIDK 633
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A ++ + G + Y +K C R E QL+ ++ S G+ V ++ L+
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVR 693
Query: 447 ASITSQDFQ 455
A I Q
Sbjct: 694 AVIKYGPIQ 702
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/415 (20%), Positives = 171/415 (41%), Gaps = 23/415 (5%)
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
E C + + + PN+ N+ + C ++V A+ ++ M GV+P+ ++ L
Sbjct: 229 EACDLFHEMTQQGVPPNVVTYNSVIHALCKA-RAVDKAQGILRQMVGNGVQPDNVTYNTL 287
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ Y+ G ++ V + M G V S+ ++ K G +E A L G+
Sbjct: 288 IHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGH 347
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ +Y ++ G+ G + ++NL + GIV ++ V +++ G
Sbjct: 348 ----KLNIISYSTLLHGYATAGCLVDMSNLF---NLMVRDGIVPNQHVFNILVNGYAKCG 400
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+ +A I ++M G + + Y+ + A+C+ +A + G++ + Y
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQ 460
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
LI+ T D A L ++R + S+ +++ L + R D ++
Sbjct: 461 CLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRT 520
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+ + + S+I +C G++ +A R M+ + EP+ TY +L+NG +
Sbjct: 521 GE-KADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDD 579
Query: 563 VLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS--QEM 615
L+++ E+ KG+K F Y ++ G F A K QEM
Sbjct: 580 GLILFRELL-------HKGVK-----PTTFTYGIILDGLFHAGRTAAAKEMFQEM 622
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 149/384 (38%), Gaps = 25/384 (6%)
Query: 204 CCRIA-LDENLDF--------MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
CCR LD F MK ++ ++ L G C ++ + + M LG P
Sbjct: 113 CCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVP 172
Query: 255 NESSFGFLAYLYALKGLQEKIVEL--ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+ S+ + G + +++ ++ G +V YS+++ G K G + A
Sbjct: 173 DAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEA-- 230
Query: 313 TILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
C M Q TY V+ + V ++ +++ +G+ D
Sbjct: 231 ----CDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGIL---RQMVGNGVQPDNVT 283
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY-CKEHRTAEATQLVMDI 429
+I LG +A + EM + G + V T A+ CK R EA + +
Sbjct: 284 YNTLIHGYSTLGQWKQAVRMFKEMTSRGV-IPNTVTCSTFVAFLCKHGRIEEAREFFDSM 342
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+ G +L++ +Y L+ T+ +LF M I + + ++ G +
Sbjct: 343 LAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMV 402
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
A F+ E ++ + + ++IHAFC+ G ++DA MI EPN Y
Sbjct: 403 R-EAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQC 461
Query: 550 LINGYVTAEQYFSVLMMWHEIKRK 573
LI G+ T + +EI+ K
Sbjct: 462 LIQGFCTHGDLVKAEELVYEIRNK 485
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 135/339 (39%), Gaps = 15/339 (4%)
Query: 218 PNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
PN C+ + C +G + +A + ++M G + N S+ L + YA G +
Sbjct: 314 PNTVTCSTFVAFLCKHG--RIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMS 371
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
L +LM G ++ L++GY K G + A +M++ + + TY
Sbjct: 372 NLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIF------EDMQKRGLNPDVLTYL 425
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
V+ F + G+ + + + + + G+ + +V +I G KA ++ E+
Sbjct: 426 AVIHAFCRMGS---MDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEI 482
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + + + CKE R EA ++ I +G + DV + +LI+
Sbjct: 483 RNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKM 542
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
AF + M I +Y T++ G +N R + E++ V+ T +
Sbjct: 543 SEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKG-VKPTTFTYGI 601
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
I+ AGR AK + MI TY L+ G
Sbjct: 602 ILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTG 640
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 99/507 (19%), Positives = 187/507 (36%), Gaps = 32/507 (6%)
Query: 44 KSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSK 103
K+ D +Q + DN+T T +H +A + FK +T+ + P+
Sbjct: 258 KARAVDKAQGILRQMVGNGVQPDNVT-YNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNT 316
Query: 104 PVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFA 163
++ +A L + F S+ + K KL + + TLL A
Sbjct: 317 VTCSTFVAFLCKHGRIEEAREFFDSM---LAKGHKL-NIISYSTLLHGYATAGCLVDMSN 372
Query: 164 LVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYAC 223
L M ++ +P + LV+ K + +FE+ + L+ P++
Sbjct: 373 LFNLMVRDG-IVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLN-------PDVLTY 424
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN 283
A + C + S+ DA M GV PN + + L + G K EL +
Sbjct: 425 LAVIHAFCR-MGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIR 483
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN 343
G ++ ++SLI+ K G + A R + + G E++D + + ++ G+
Sbjct: 484 NKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTG--EKADVN--IFTSLIDGYCLI 539
Query: 344 GNVKGLANLIIEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
G + EA ++ + GI D +++ C G D + E+ G
Sbjct: 540 GKMS-------EAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGV 592
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
Y L RTA A ++ ++ SG+ + + Y L+ + + A +
Sbjct: 593 KPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAIT 652
Query: 460 LFRDMREARI-YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
+F+ + + +D+ L IM M R A L + D + + ++
Sbjct: 653 VFQKLCAMNVKFDI--VILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMEN 710
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
K G +E+A+ M+ P
Sbjct: 711 LIKEGSVEEAEGVFSVMLKSGLSPTSH 737
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 152/346 (43%), Gaps = 19/346 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ CN+ ++G C +Q++ AE V++ M + PN +++ L + Y G +
Sbjct: 283 IPPNVVTCNSVIDGLCK-VQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEA 341
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD--FSKETY 333
V + M+ G +V YS LI K G L + +R I +M QS + TY
Sbjct: 342 VRILKEMSRDGQRPNVVTYSMLIDCLCKSG-LHAEAREIF-----NSMIQSGQKPNASTY 395
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNLGLSDKAHSILD 392
++ G+ GN+ + N+ + +G+ R V F I I A G D+A +
Sbjct: 396 GSLLHGYATEGNLVDMNNV---KDLMVQNGMRPGRHV-FNIEIYAYCKCGRLDEASLTFN 451
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M G + Y + CK R +A + GL D+ ++ LI
Sbjct: 452 KMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHG 511
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH-- 510
++ A LF +M + I ++ +++ L + + D + PR K +
Sbjct: 512 KWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLM---PRAGAKPNVV 568
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+N++IH + AG + + + L M+ + +P T+ +L++G V+
Sbjct: 569 SYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVS 614
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 17/217 (7%)
Query: 372 FGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD-I 429
FGI IS C + G + + L ++ G + P L+ C E RT++A +V+ +
Sbjct: 147 FGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRM 206
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA--RIYDLKGSYLTIMTGLME-- 485
G DV +Y L++ + + A L M E SY T++ G +
Sbjct: 207 PELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEG 266
Query: 486 --NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
L LD + P V NS+I CK ++ A+ L++MI PN
Sbjct: 267 DVGKAYTLFCKMLDHGIP-PNVVT----CNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 321
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQK 580
TY SLI+GY+++ Q+ + + E+ R DGQ+
Sbjct: 322 CTTYNSLIHGYLSSGQWTEAVRILKEMSR----DGQR 354
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 114/273 (41%), Gaps = 8/273 (2%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTI-LLCLGGGNMEQSDFSKETYCEVVKGF 340
M E G + + Y++L+ G E A+ I ++ G N + S Y V+ GF
Sbjct: 206 MPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVS---YTTVIHGF 262
Query: 341 LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
+ G+V L K+ GI + +I + DKA ++L +M
Sbjct: 263 FKEGDVGKAYTLFC---KMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 319
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
Y + Y + EA +++ ++S G + +V Y LI+ S A +
Sbjct: 320 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREI 379
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFC 520
F M ++ +Y +++ G M D +V++ + H +N I+A+C
Sbjct: 380 FNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQN-GMRPGRHVFNIEIYAYC 438
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
K GRL++A T +M F P+ Y ++I+G
Sbjct: 439 KCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDG 471
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 107/284 (37%), Gaps = 45/284 (15%)
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG--LQ 435
C SD + +L M GC+ + Y LK C E + EA +L+ ++ G
Sbjct: 190 CAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCP 249
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
+V +Y +I D A++LF M + I + +++ GL + + A
Sbjct: 250 PNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAV 309
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAF-----------------------------------C 520
L +++ D + +NS+IH + C
Sbjct: 310 LQQMI-DEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLC 368
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQK 580
K+G +A+ MI +PN TY SL++GY T L+ + +K + Q
Sbjct: 369 KSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGN----LVDMNNVKDLMV---QN 421
Query: 581 GIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
G++ ++ + +YA K G D K Q+ D Y
Sbjct: 422 GMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAY 465
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 88/445 (19%), Positives = 174/445 (39%), Gaps = 62/445 (13%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
N+ S T +H + +A+ F + + + P+ NS+I L +Q + +A
Sbjct: 251 NVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQ---AMDKAE 307
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
A + +I+++ + + T ++L+ ++ A ++K M ++ P + L+D
Sbjct: 308 AVLQQMIDEH-IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQ-RPNVVTYSMLID 365
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDAEKVIE 245
K+ ++F + KPN + L G Y + ++ D V +
Sbjct: 366 CLCKSGLHAEAREIFNSMIQSG-------QKPNASTYGSLLHG--YATEGNLVDMNNVKD 416
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M G+RP F Y Y G ++ + M + GF +V Y+++I G K+G
Sbjct: 417 LMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIG 476
Query: 306 NLESA-SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
L+ A SR +C+++ GL+ II L
Sbjct: 477 RLDDAMSR--------------------FCQMID--------DGLSPDIITFNTLIH--- 505
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
GF + G +KA + EM G + + + KE + EA +
Sbjct: 506 ------GFAL------HGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARK 553
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L + +G + +V +Y+ +I + + L DM + ++ T++ G++
Sbjct: 554 LFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMV 613
Query: 485 E-NHRPELMAA--FLDEVVEDPRVE 506
+P+++ +D ED R+E
Sbjct: 614 SMGLKPDVVTCKTLIDSCCEDGRIE 638
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 153/360 (42%), Gaps = 12/360 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P++ N+ ++ C +++ AE V+ M GV P+ ++ + + Y+ G ++
Sbjct: 295 VEPDVVTYNSIVDALCKA-RAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKES 353
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++ M G +V ++S +S K G + A G+M +Y
Sbjct: 354 AKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPD----LVSYSI 409
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ G + NL + GIV + +ISA G+ D+A + EM
Sbjct: 410 LLHGYATEGRFADMNNLF---HSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQ 466
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y + A+C+ R A+A + + S GL+ + Y +LI D
Sbjct: 467 GQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLV 526
Query: 456 SAFSLFRDMREARIYDLKGSYLT-IMTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDWN 513
A L +M I + + I+ L R + V+ R + T +N
Sbjct: 527 KAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVT--FN 584
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
S+I +C G++E A L M+ + EP+ TY +L++GY + + L+++ E+ K
Sbjct: 585 SLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHK 644
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 147/343 (42%), Gaps = 30/343 (8%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELESLM 282
N L+ C+ ++ + ++ MS LG PN S+ + L QE + ++ +
Sbjct: 195 NTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMA 254
Query: 283 NEFG-FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKG 339
E G S +V ++++I G+ K G + A I M Q + TY +V
Sbjct: 255 KEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLI------NEMVQKGVEPDVVTYNSIVDA 308
Query: 340 FLQNGNVKGLANLIIEA---QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
L A L++ + +EP G+ II G ++ + +M +
Sbjct: 309 -LCKARAMDKAELVLRQMVDKGVEPDGLTYT-----AIIHGYSCSGHWKESAKMFRKMTS 362
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G G+ + + + CK R+ +A ++ +++ G D+ +Y L+ T F
Sbjct: 363 KGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFAD 422
Query: 457 AFSLFRDMREARIYDLKGSYLTIMT-----GLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+LF M + I + +++ G+M+ E M F + + R +V T
Sbjct: 423 MNNLFHSMADKGIVANCHCFNILISAHAKRGMMD----EAMLVFTEMQGQGVRPDVVT-- 476
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++++I AFC+ GRL DA +MI + EPN Y SLI+G+
Sbjct: 477 YSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGF 519
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 8/251 (3%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PNI ++ + C V DA V + +G RP +F L Y L G EK
Sbjct: 542 RPNIVFFSSIIHSLC-NEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAF 600
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+ M G +V Y++L+SGY K G ++ L+ ++ + TY V
Sbjct: 601 GVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDG----LILFREMLHKKVKPTTVTYSIV 656
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ G G + E + SG VD ++ L+D+A ++ ++ A
Sbjct: 657 LDGLFHAGRTSAAKKMFHE---MIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGA 713
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
C + + + A K R EA L IS+SGL +V Y +I + +
Sbjct: 714 MDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEE 773
Query: 457 AFSLFRDMREA 467
A ++F M ++
Sbjct: 774 ADTMFSSMEKS 784
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 119/292 (40%), Gaps = 9/292 (3%)
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+D + +M+ G+ N F L +A +G+ ++ + + + M G +V YS+L
Sbjct: 421 ADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTL 480
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
IS + ++G L A + G +E + Y ++ GF +G++ L+ E
Sbjct: 481 ISAFCRMGRLADAMEKFSQMISIG-LEPNTV---VYHSLIHGFCMHGDLVKAKELVSE-- 534
Query: 358 KLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+ GI V F II + N G AH + + + G + + + YC
Sbjct: 535 -MMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLV 593
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+ +A ++ + S G++ DV Y+ L+ S LFR+M ++ +Y
Sbjct: 594 GKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTY 653
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
++ GL R E++ D V + ++ C+ ++A
Sbjct: 654 SIVLDGLFHAGRTSAAKKMFHEMI-DSGTAVDIDTYKILLKGLCRNDLTDEA 704
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 11/194 (5%)
Query: 410 LKAYCKEHRTAEATQLVMD-ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE-- 466
LK C RT EA +++ +S G + +Y+ +I++ Q A + + M +
Sbjct: 198 LKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEG 257
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
R S+ T++ G + ++E+V+ VE +NSI+ A CKA ++
Sbjct: 258 GRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKG-VEPDVVTYNSIVDALCKARAMD 316
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEH 586
A+ LR+M+ EP+ TY ++I+GY + W E + KG+
Sbjct: 317 KAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGH-------WKESAKMFRKMTSKGLIPGI 369
Query: 587 NLVDAFLYALVKGG 600
++F+ +L K G
Sbjct: 370 VTFNSFMSSLCKHG 383
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 134/331 (40%), Gaps = 34/331 (10%)
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+D E + + M ++PN +F + G K ++ M +G+S +V Y++L
Sbjct: 205 ADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTL 264
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSD-FSKE-----------TYCEVVKGFLQNGN 345
I GY KLG G G M ++D KE T+ ++ GF ++ N
Sbjct: 265 IDGYCKLG-------------GNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDN 311
Query: 346 VKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
+ G + E Q + P+ I + +I+ N G ++A + D+M + G L
Sbjct: 312 LPGSLKVFKEMLDQDVIPNVITYN-----SLINGLCNGGKINEAIGMRDKMVSAGVQPNL 366
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y + +CK EA + + G + Y+ LI+A F+L +
Sbjct: 367 ITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M I G+Y ++ GL N E D++ ++ T ++ ++ +C G
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLPDLVT--FHILMEGYCSRG 484
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
A L+ M + +P TY ++ GY
Sbjct: 485 ESRKAAMLLKEMSKMGLKPRHLTYNIMMKGY 515
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 147/368 (39%), Gaps = 43/368 (11%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN++ N + C ++ A V+E M V G PN S+ L Y G K+
Sbjct: 219 IQPNVFTFNVVINALC-KTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTIL----------------- 315
+ ++++ E S + ++ LI G+ K NL + +
Sbjct: 278 YKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSL 337
Query: 316 ---LCLGGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLI--IEAQKL 359
LC GG E + TY ++ GF +NG +K ++ ++ Q
Sbjct: 338 INGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGT 397
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
P+ + + +I A LG D ++ +EM G +G Y + C+
Sbjct: 398 RPTTRMYNM-----LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A +L +++ GL D+ + L+E + + + A L ++M + + +Y +
Sbjct: 453 EAAKKLFDQLTNKGLP-DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIM 511
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
M G + + ++ ++ R+ + +N ++ + + G+LEDA L M+
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571
Query: 540 FEPNDQTY 547
PN TY
Sbjct: 572 LVPNRITY 579
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 13/220 (5%)
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT---SQDFQSAFSLFRDMR 465
+ A CK + +A ++ D+ G +V +Y+ LI+ + A ++ ++M
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288
Query: 466 EARIYDLKGSYLTIMTGL-MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
E + ++ ++ G +++ P + F + + +D V T +NS+I+ C G+
Sbjct: 289 ENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVIT--YNSLINGLCNGGK 346
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF 584
+ +A +M+ +PN TY SLING+ L M+ +K GQ G +
Sbjct: 347 INEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVK------GQ-GTRP 399
Query: 585 EHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ + + A K G D + E+ + + D Y
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY 439
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 169/456 (37%), Gaps = 62/456 (13%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
++H LL S+ APAF L +F+ R + + L +C A E
Sbjct: 87 SLHPLLSSL----PPAPAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRAL-----E 137
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
R PN N + G C + + E + E G+ P++ ++ +
Sbjct: 138 LLR-------QMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVI 190
Query: 264 YLYALKGLQEKIVEL-ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ G E ++ + ++ E V Y++LI GY GNLE A R G
Sbjct: 191 SGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRY------RGE 244
Query: 323 MEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
M S TY V G L+ +++ G+ D +I+
Sbjct: 245 MVDRGVSMTVATYNLFVHTLFMEGRAAEAHALV---EEMGEKGLAPDAFTYNILINGYCK 301
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G KA + + M G + Y + A + E +L D G++ D+
Sbjct: 302 EGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFM 361
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y+ALI + T D AF + +M + RI +Y T+M GL R + ++E+
Sbjct: 362 YNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMT 421
Query: 501 E---------------------DPRVEVKTHD-------------WNSIIHAFCKAGRLE 526
+ D + VK D +N++I C G+
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGG 481
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
DA+ ++ M+ P+D TY+SLI G T ++ +
Sbjct: 482 DAEDLVKEMVGNGITPDDSTYISLIEGLTTEDERLA 517
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 134/353 (37%), Gaps = 14/353 (3%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
L + ++ T SV G RP+ +S + L +L L L L++ + V
Sbjct: 46 LAATPSLPHLLLTASVAG-RPHTTSLSLYSRLKSLS-LPIPTASLHPLLSSLPPAPAFVL 103
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-------TYCEVVKGFLQNGNV 346
++ + + L LC G + + ++ TY V+ GF G V
Sbjct: 104 FADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPSPNAVTYNTVIAGFCARGRV 163
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG-CSVGLGV 405
+ A + I + E GI D+ +IS +G + A + DEM G +
Sbjct: 164 Q--AGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVM 221
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + YC + A + ++ G+ + V Y+ + A +L +M
Sbjct: 222 YNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMG 281
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
E + +Y ++ G + + E A + EV+ + + S+IHA G +
Sbjct: 282 EKGLAPDAFTYNILINGYCKEGK-EKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMV 340
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI-KRKISTD 577
++ R + P+ Y +LIN + T + E+ K++I+ D
Sbjct: 341 QETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPD 393
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 143/336 (42%), Gaps = 9/336 (2%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN N + G C L+ + +A +VIE M+ G+ P+ ++ + +G ++ V
Sbjct: 279 PNRNTYNILVHGYC-KLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVR 337
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M F +V Y++LI G + ++A + + G E T+ ++
Sbjct: 338 LRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENG----VTHNIMI 393
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
K F G + +N+++ K+ SG D +I+ G +A+ ++DEM
Sbjct: 394 KWFCTEGKIDEASNVMV---KMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRK 450
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + L C E + +A L M G LD Y LI + A
Sbjct: 451 GLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRA 510
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
L+ +M+E I +Y TI+ GL + + + L+E++E V ++ N IIH
Sbjct: 511 LKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTS-NIIIH 569
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+C G +E A + +M+ +P+ T L+ G
Sbjct: 570 GYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRG 605
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 173/414 (41%), Gaps = 19/414 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N ++GC + + A K++E M GV+ N + + + +G ++
Sbjct: 349 PDVVTYNTLIDGC-FEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASN 407
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M E GFS Y+++I+GY K G + A + ++ +G ++ F+ T ++
Sbjct: 408 VMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYK-MMDEMGRKGLKLDTFTLNT---LL 463
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+ L ++A+K G ++D +I +D+A + +EM
Sbjct: 464 HTMCLEKQLDDAYTLTMKARK---RGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKET 520
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + Y ++ C +T +A + ++ GL D + +I + A
Sbjct: 521 GIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKA 580
Query: 458 FSLFRDMREARIYDLKGSYLT---IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
F M E + LK T ++ GL E + + + + T +N
Sbjct: 581 FQFHNKMVE---HSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGK-PMDTVTYNI 636
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA---EQYFSVLMMWHEIK 571
II +FCK RLEDA + M EP+ TY +++ G A E+ + + + E
Sbjct: 637 IISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKG 696
Query: 572 RKIST-DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+++ T D + + + +L G + M++ +++++ V ++K+ Y
Sbjct: 697 QQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTY 750
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 156/415 (37%), Gaps = 87/415 (20%)
Query: 217 KPNIYACNAALEGCCYG--LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+PN+ CN L S+ + +V + LGV+PN ++F L + Y E+
Sbjct: 170 RPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEE 229
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+ L + M E+G V TY
Sbjct: 230 ALRLINQMGEYGCCPDNV---------------------------------------TYN 250
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
V+ + + + +L+++ ++ SG+ +R+ ++ L +A +++ M
Sbjct: 251 TVLTALCKRSQLTQVRDLLLQ---MKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELM 307
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + Y ++ C E + EA +L + S L DV Y+ LI+ +
Sbjct: 308 TGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGS 367
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
+AF L +M+ AR G+ EN TH N
Sbjct: 368 DAAFKLVEEMK-AR-------------GVKENG--------------------VTH--NI 391
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+I FC G++++A + +M+ F P+ TY ++INGY A + M E+
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEM---- 447
Query: 575 STDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFM 629
G+KG+K + ++ L+ + D + K+++ +D+ Y M
Sbjct: 448 ---GRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIM 499
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 109/509 (21%), Positives = 197/509 (38%), Gaps = 59/509 (11%)
Query: 97 NSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNAN 156
+ LFP++ N L+ L+ LK A A V+ ++ L D T +T++ + +
Sbjct: 275 SGLFPNRNTYNILVHGYCKLK---WLKEA-AEVIELMTGKGMLPDVWTYNTMVRGLCDEG 330
Query: 157 TAAPAFALVKCM--FKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE----------- 203
A L M FK +P + L+D C ++ A K+ EE
Sbjct: 331 KIDEAVRLRDKMESFK---LVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGV 387
Query: 204 ---------CCRIALDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKVIET 246
C +DE + M P+ + N + G C +++A K+++
Sbjct: 388 THNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKA-GKMAEAYKMMDE 446
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
M G++ + + L + L+ + L + G+ V Y +LI GY K
Sbjct: 447 MGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKD-- 504
Query: 307 LESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
E A R + L M+++ TY +++G +G + + E L G+
Sbjct: 505 -EQADRALKL---WEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNE---LLEKGL 557
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
V D S II G +KA ++M + L+ C+E +
Sbjct: 558 VPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLT 617
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L S G +D Y+ +I + + + AF L +M + + +Y I+TGL
Sbjct: 618 LFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLT 677
Query: 485 ENHRPE----LMAAFLDE----VVEDPRVEVKTHD--WNSIIHAFCKAGRLEDAKRTLRR 534
+ R E L F ++ +D E+ T D ++ I + C G+ +DA + ++
Sbjct: 678 KAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQ 737
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
N TY+ L++G + + F+
Sbjct: 738 AEQKGVSLNKYTYIKLMDGLLKRRKSFTT 766
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 164/402 (40%), Gaps = 44/402 (10%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PNI N+ ++G C Q++ AE V++ M F KG E+ V
Sbjct: 172 PNIVTYNSVIDGLCKA-QAMDKAEAVLQQM-----------FD--------KGQLEEAVR 211
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL--LCLGGGNMEQSDFSKETYCE 335
L M+ G +V YS LI Y K+G A R I + G N + TY
Sbjct: 212 LLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEA-RNIFDSMVRRGQNPDAY-----TYRT 265
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ G + + +L+ + GI ++ V +I A DKA + EM
Sbjct: 266 LLHGYATKGALVDMHDLL---ALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMR 322
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G S + Y + CK R +A + S GL D+ + +LI T +++
Sbjct: 323 QKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWK 382
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
L +M I+ TIM L + R F D+++ V+ + +
Sbjct: 383 KVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIH-VGVKPDVVSYTIL 441
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I +C G+++++ + L RM+ + P++ TY +L+NGY + L ++ E+ S
Sbjct: 442 IDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREM---FS 498
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
D + +A Y ++ G F A V + MK+
Sbjct: 499 KDVKP---------NAITYNIILHGLFHAGRVVAAREFYMKI 531
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 140/341 (41%), Gaps = 19/341 (5%)
Query: 218 PNIYACNAALEGCCYGLQ-SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P+ Y L G Y + ++ D ++ M G+ + F L YA +K +
Sbjct: 258 PDAYTYRTLLHG--YATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAM 315
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
M + GFS +V Y+++I K G +E A M S + T+
Sbjct: 316 TAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHF------SQMVSEGLSPDIITFT 369
Query: 335 EVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ G G K + L E + + P+ I ++ I+ + G +AH D
Sbjct: 370 SLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNT-----IMDSLCKEGRVLEAHDFFD 424
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
++ G + Y + YC + + E+ +L+ + S GL+ D Y AL+ +
Sbjct: 425 QIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNG 484
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
A +L+R+M + +Y I+ GL R F ++V D +++ + +
Sbjct: 485 RVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIV-DSGIQLGINTY 543
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
N ++ C+ +++A R + + +F+ +T+ +I G
Sbjct: 544 NIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVG 584
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 143/375 (38%), Gaps = 13/375 (3%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
EE R+ + ++P++ + ++ C + ++A + ++M G P+ ++
Sbjct: 206 LEEAVRLLKKMSGGGLQPDVVTYSLLIDYYC-KIGRCTEARNIFDSMVRRGQNPDAYTYR 264
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L + YA KG + +L +LM + G + ++ LI Y K L+ A +
Sbjct: 265 TLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFI----- 319
Query: 321 GNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
M Q FS TY V+ + G V+ + + ++ G+ D +I
Sbjct: 320 -EMRQKGFSPNVVTYTTVIDILCKAGRVE---DAVSHFSQMVSEGLSPDIITFTSLIHGL 375
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
+G K + EM G + + CKE R EA I G++ DV
Sbjct: 376 CTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDV 435
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
+Y LI+ + L M + +Y ++ G +N R + A E
Sbjct: 436 VSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYRE 495
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+ V+ +N I+H AGR+ A+ +++ + TY ++ G
Sbjct: 496 MFSKD-VKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENS 554
Query: 559 QYFSVLMMWHEIKRK 573
L M+ ++ K
Sbjct: 555 FVDEALRMFQGLRSK 569
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 109/294 (37%), Gaps = 68/294 (23%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH---------------- 417
+I+ G DKA+++ EM G + Y + CK
Sbjct: 145 VINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKG 204
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-REARIYDLKGSY 476
+ EA +L+ +S GLQ DV Y LI+ A ++F M R + D +Y
Sbjct: 205 QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAY-TY 263
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAF----------------- 519
T++ G M L +++D + ++ H +N +I A+
Sbjct: 264 RTLLHGYATKGALVDMHDLLALMIQDG-IPLEDHVFNILIRAYAKNETLDKAMTAFIEMR 322
Query: 520 ------------------CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
CKAGR+EDA +M+ P+ T+ SLI+G T +
Sbjct: 323 QKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGE-- 380
Query: 562 SVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG-------FFDAVMQV 608
W ++++ +GI ++ + +L K G FFD ++ V
Sbjct: 381 -----WKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHV 429
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 102/263 (38%), Gaps = 32/263 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN N ++ C V +A + + +GV+P+ S+ L Y L G ++
Sbjct: 396 IHPNAIFLNTIMDSLCKE-GRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDES 454
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE---- 331
++L M G V YS+L++GY K G ++ A + + FSK+
Sbjct: 455 IKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALA----------LYREMFSKDVKPN 504
Query: 332 --TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG------L 383
TY ++ G G V ++ +VD + GI + + LG
Sbjct: 505 AITYNIILHGLFHAGRVVAAREFYMK---------IVDSGIQLGINTYNIVLGGLCENSF 555
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
D+A + + + + + + + K R +A L I SGL D Y
Sbjct: 556 VDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGL 615
Query: 444 LIEASITSQDFQSAFSLFRDMRE 466
+I++ I + + LF M +
Sbjct: 616 MIQSHIEEGLLEESDELFLSMEK 638
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 174/418 (41%), Gaps = 16/418 (3%)
Query: 207 IALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
+ LD + + PN N + G C L + +A +VI+ M+ V P+ ++ L
Sbjct: 269 LLLDMKNNGLLPNRNTFNILVSGYC-KLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGL 327
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
G ++ L+ M +V Y++LI+G + I G G +
Sbjct: 328 CKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNA 387
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
TY VVK +++ G + N E +K+E SG D +I+ G +
Sbjct: 388 ----VTYNVVVKWYVKEGKMDNAGN---ELRKMEESGFSPDCVTFNTLINGYCKAGRLSE 440
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A ++DEM+ G + L C E + +A +L+ S G +D +Y LI
Sbjct: 441 AFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIM 500
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
A L+ +M+E I +Y T++ GL + + + L+E++E V
Sbjct: 501 GYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVP 560
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+T +N+II +C+ G++E A + +M+ F+P+ T L+ G T L +
Sbjct: 561 DET-TYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKL 619
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
++ T KG + + + L K F+ ++ + +E K+ D + Y
Sbjct: 620 FN-------TWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTY 670
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 8/256 (3%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
I+ G ++A +L +M G + + YCK EA Q++ ++ +
Sbjct: 253 ILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNN 312
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ DV Y+ LI AF L +M ++ +Y T++ G + L
Sbjct: 313 VLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFD-CSSSLKG 371
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
L + +E V+ +N ++ + K G++++A LR+M F P+ T+ +LING
Sbjct: 372 FELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLING 431
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
Y A + M E+ RK G+K ++ L+ L D +++ +
Sbjct: 432 YCKAGRLSEAFRMMDEMSRK-------GLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 484
Query: 614 EMKVFVDKWKYKQAFM 629
+ FVD+ Y M
Sbjct: 485 KRGYFVDEVSYGTLIM 500
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 135/348 (38%), Gaps = 23/348 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+K N N L C G + + DA K++ + S G +E S+G L Y G +
Sbjct: 453 LKMNSVTLNTILHTLC-GERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEA 511
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++L M E ++ Y+++I G G + + + L G + + TY
Sbjct: 512 MKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPD----ETTYNT 567
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ + G V+ K+ D ++ G+ DKA + +
Sbjct: 568 IILGYCREGQVEKAFQF---HNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWI 624
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ G ++ Y + CKE R EA L+ ++ L D Y+A++ A + +
Sbjct: 625 SKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMK 684
Query: 456 SAFSLF-RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A R + + ++ D S ++ ++ ++ DP + ++
Sbjct: 685 EAEEFMSRIVEQGKLQDQTISL----------NKRKIESSSETSQESDPN----SVTFSE 730
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
I+ C G+ +DA ++ + TY+SL+ G + + S
Sbjct: 731 QINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRKSIS 778
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 158/364 (43%), Gaps = 18/364 (4%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
F+E ++ + +KPN+ NA ++ C G ++ E M GV+P+ ++
Sbjct: 238 FDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYN 297
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L + + GL E L + M + G + Y++L+ K G ++ A I+L + G
Sbjct: 298 SLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYE-IMLEMPG 356
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
+ + TY + G+ + G ++ NL E + L GI +DR ++S
Sbjct: 357 KKILPNVV---TYSTMADGYAKAGRLEDALNLYNEMKFL---GIGLDRVSYNTLLSIYAK 410
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
LG + A + EM + G + Y L Y K+ + E T++ ++ + ++
Sbjct: 411 LGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLT 470
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y LI+ ++ A +FR+ ++A + Y ++ L +N + LDE+
Sbjct: 471 YSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMT 530
Query: 501 -EDPRVEVKTHDWNSIIHAFCKAGRLE--------DAKRTLRRMIFLQFEPNDQTYLSLI 551
E R V T +NSII AF ++ E +R F+ E D++ ++
Sbjct: 531 KEGIRPNVVT--YNSIIDAFGRSTTAEFLVDGVGASNERQSESPSFMLIEGVDESEINWD 588
Query: 552 NGYV 555
+G+V
Sbjct: 589 DGHV 592
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 156/362 (43%), Gaps = 28/362 (7%)
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
S+ G L + KG+ E+ ++E G+ + + +S+LIS Y K G + A +
Sbjct: 195 STLGRLGKVELAKGV------FETALSE-GYGNTVFAFSALISAYGKSGYFDEAIKVF-- 245
Query: 317 CLGGGNMEQSDFSKE--TYCEVVKGFLQNG-NVKGLANLIIEAQKLEPSGIVVDRSVGFG 373
+M+ S TY V+ + G K + + E + +G+ DR
Sbjct: 246 ----ESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLR---NGVQPDRITYNS 298
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+++ C GL + A ++ +EM G + Y L A CK + A ++++++
Sbjct: 299 LLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKK 358
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ +V Y + + + + A +L+ +M+ I + SY T+++ + R E
Sbjct: 359 ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDAL 418
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
E+ V+ +N+++ + K G+ + R + M + PN TY +LI+
Sbjct: 419 KVCKEMGSSG-VKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDV 477
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFD-AVMQVVEKS 612
Y Y + ++ E K Q G+K + L + AL K G D AV+ + E +
Sbjct: 478 YSKGSLYEEAMEVFREFK-------QAGLKADVVLYSELINALCKNGLVDSAVLLLDEMT 530
Query: 613 QE 614
+E
Sbjct: 531 KE 532
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 121/284 (42%), Gaps = 10/284 (3%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+IS LG + A + + + G + + + AY K EA ++ + SG
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252
Query: 434 LQLDVGNYDALIEA-SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
L+ ++ Y+A+I+A +F+ +F +M + + +Y +++ E
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+E++ D ++ +N+++ A CK G+++ A + M + PN TY ++ +
Sbjct: 313 RNLFNEMI-DRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMAD 371
Query: 553 GYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
GY A + L +++E+K GI + + L K G F+ ++V ++
Sbjct: 372 GYAKAGRLEDALNLYNEMKF-------LGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEM 424
Query: 613 QEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKN 656
V D Y A ++ + K R FK+M+ F N
Sbjct: 425 GSSGVKKDVVTY-NALLDGYGKQGKFNEVTRVFKEMKKDRVFPN 467
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 144/353 (40%), Gaps = 63/353 (17%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMS--------VLGVRPNESSFGFLAYLYA 267
++PN+ + C + V DA +V+E MS + V P+ + Y
Sbjct: 336 IQPNVVTFGILINHMCK-FRRVDDALEVLEKMSGGKESGGISVSVEPD-----VVIYNTL 389
Query: 268 LKGL------QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+ GL QE + +E + ++ G + + Y+ LI G+ K G +E
Sbjct: 390 IDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKE----LFDEM 445
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
N E + T +V G + G V N +EAQ+ G+ D +I+A N+
Sbjct: 446 NKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQR---RGMKGDAVTYTALINAFCNV 502
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
+KA + +EM GCS VY + + + R A+A+ ++ ++ G++ D Y
Sbjct: 503 NNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCY 562
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ LI + F F + ++M EA GL +P+
Sbjct: 563 NTLIGGFCRTNKFHRVFEMLKEMEEA--------------GL----KPD----------- 593
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
T +N++I K G L+ A++ +R+MI P TY ++IN Y
Sbjct: 594 -------TITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAY 639
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 122/293 (41%), Gaps = 13/293 (4%)
Query: 212 NLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL 271
N + + PN+ N + G C VS A G++ + ++ L +
Sbjct: 446 NKEGVAPNVVTVNTLVGGMCR-TGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNN 504
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
EK +EL + M + G S + Y +LISG+ + G + AS + +++ +
Sbjct: 505 FEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVL------AELKKLGIRPD 558
Query: 332 TYC--EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
T C ++ GF + + ++ E +E +G+ D +I+ G A
Sbjct: 559 TVCYNTLIGGFCRTNKFHRVFEMLKE---MEEAGLKPDTITYNTLIAYASKNGDLKFAQK 615
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI-SSSGLQLDVGNYDALIEAS 448
++ +M G + Y + AYC EA ++ D+ ++S + + Y+ LI +
Sbjct: 616 VMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSL 675
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ +SA SL DM+ + +Y I GL + E + F+D ++E
Sbjct: 676 CKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE 728
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 115/289 (39%), Gaps = 34/289 (11%)
Query: 370 VGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYV-PTLKAY-------CKEHRTA 420
V FGI I+ D A +L++M+ S G+ V V P + Y CK R
Sbjct: 341 VTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQ 400
Query: 421 EATQLVMDI-SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
E L+ + S G D Y+ LI+ + + + LF +M + + + T+
Sbjct: 401 EGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTL 460
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIF 537
+ G+ R F VE R +K + ++I+AFC E A M+
Sbjct: 461 VGGMCRTGRVSSAVNFF---VEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLK 517
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALV 597
P+ Y +LI+G+ A + + E+K+ GI+ D Y +
Sbjct: 518 SGCSPDAIVYYTLISGFSQAGRMADASFVLAELKK-------LGIR-----PDTVCYNTL 565
Query: 598 KGGF-----FDAVMQVVEKSQEMKVFVDKWKYKQ--AFMENHKKLKVAK 639
GGF F V +++++ +E + D Y A+ + LK A+
Sbjct: 566 IGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQ 614
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 142/350 (40%), Gaps = 30/350 (8%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+ + NA L G G + V AEK + V P+ +F + G K
Sbjct: 153 RPSTSSVNALLAGL-VGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF-------- 328
++ + +G + + Y+SLI GY K G G GNM D
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKG-------------GAGNMYHVDMLLKEMVEA 258
Query: 329 ----SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
+ T+ ++ G+ +N N + ++++ GI +IS + G
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVF---EEMKQQGIAASVVTYNSLISGLCSEGKV 315
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
++ +++EM G S + LK +CK+ A+A + ++ ++ DV Y+ L
Sbjct: 316 EEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNIL 375
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I+ + A ++ M + I +Y ++TG + + LDE+ E
Sbjct: 376 IDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK-G 434
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+E +N +I A C G + A + L M + EPN TY ++I G+
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 160/381 (41%), Gaps = 29/381 (7%)
Query: 189 RKNSNFVAFLKVFEECCRIA-LDENLDFMK--------PNIYACNAALEGCCY--GLQSV 237
R + + F V CRI L + D K P++ N+ ++G C G ++
Sbjct: 186 RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNM 245
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+ +++ M G+ P +FG L Y V + M + G ++ +V Y+SL
Sbjct: 246 YHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSL 305
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI-- 353
ISG G +E + + ME S T+ V+KGF + G + + I
Sbjct: 306 ISGLCSEGKVEEGVKLM------EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ + +EP ++ + +I LG + A ++ + M G S + Y + +
Sbjct: 360 MTERNVEPDVVIYNI-----LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
+ A+ L+ ++ G++ DV Y+ LI A + + A L +M E +
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNH 474
Query: 474 GSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+Y TI+ G + + + +A+ + +E R +N I FC+ G++++A L
Sbjct: 475 LTYNTIIQGFCD--KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLL 532
Query: 533 RRMIFLQFEPNDQTYLSLING 553
M+ PN TY ++ G
Sbjct: 533 NEMLDKCLVPNGITYETIKEG 553
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 134/319 (42%), Gaps = 20/319 (6%)
Query: 176 PFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ 235
P + G L++ KNSN A ++VFEE + + ++ N+ + G C
Sbjct: 262 PTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGI-------AASVVTYNSLISGLC-SEG 313
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
V + K++E M LG+ PNE +FG + + KG+ + M E +V Y+
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYN 373
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI 353
LI Y +LG +E A M + S TY ++ GF ++G+ + + L+
Sbjct: 374 ILIDVYRRLGKMEDAMAV------KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
E ++ GI D +I A G KA +LDEM+ G Y ++ +
Sbjct: 428 DE---MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C + A ++ + + +V Y+ I+ A L +M + +
Sbjct: 485 CDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNG 544
Query: 474 GSYLTIMTGLME-NHRPEL 491
+Y TI G+ME + P++
Sbjct: 545 ITYETIKEGMMEKGYTPDI 563
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 133/329 (40%), Gaps = 32/329 (9%)
Query: 332 TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
T+ V+ G + G ++ ++ I+A L PS + S+ I C G + H
Sbjct: 193 TFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPS-VATYNSL---IDGYCKKGGAGNMYHV 248
Query: 390 --ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+L EM G S + + YCK TA A ++ ++ G+ V Y++LI
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ + L +M + + + ++ ++ G + ++D + E VE
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER-NVEP 367
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N +I + + G++EDA M PN TY LI G+ + + S +
Sbjct: 368 DVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV---------- 617
E+K +KGI+ + + + AL G ++++++ E+ +
Sbjct: 428 DEMK-------EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Query: 618 ---FVDKWKYKQAFMENHKKLKVAKLRKR 643
F DK K A+ + ++ K RKR
Sbjct: 481 IQGFCDKGNIKSAY---EIRTRMEKCRKR 506
>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 145/341 (42%), Gaps = 49/341 (14%)
Query: 212 NLDFM-----KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
+L+FM KP+++ L C + + A KV+E M G+ P+ +S+ FL
Sbjct: 84 HLEFMVEKGQKPDVFQATQLLYDLCKTCK-MRKAIKVMEMMIGSGIIPDAASYTFLVSSL 142
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
KG ++L M E+G+ + Y+SL+ G LC+ G N+ QS
Sbjct: 143 CRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRG---------------LCMHG-NLTQS 186
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
+++ +Q G L P+ + F + +A G +D+
Sbjct: 187 -------LQLLDRLIQKG--------------LVPNAY----TYSFLLEAAYKERG-ADE 220
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A +LDE+ A G L Y L CKE RT +A QL ++ S G +V +Y+ L+
Sbjct: 221 ASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLR 280
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ ++ A L +M +Y ++ L + R E L+E++ R +
Sbjct: 281 SLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIR-ARFK 339
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+N II CK +++ + L +M++ PN+ TY
Sbjct: 340 PTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTY 380
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 140/345 (40%), Gaps = 25/345 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN Y + LE Y + +A K+++ + G +PN S+ L +G E ++
Sbjct: 200 PNAYTYSFLLEAA-YKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQ 258
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L + GFS +V Y+ L+ G E A+ +LL G+ E+S S TY ++
Sbjct: 259 LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEAN--VLLAEMDGD-ERSP-STVTYNILI 314
Query: 338 KGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+G + ++ E + +P+ S II+ D LD+M
Sbjct: 315 GSLTLHGRTEHALEVLEEMIRARFKPTA-----SSYNPIIARLCKDRKVDLVVKCLDQMM 369
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
C+ G Y + C+E EA ++ + + Y +I + +
Sbjct: 370 YRHCNPNEGTY-NAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTY 428
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-----DPRVEVKTH 510
AF L +M + +Y +++ GL M L+E +E + +++ T
Sbjct: 429 PAFQLLYEMTKYGFTPDSFTYSSLIRGL-------CMEGMLNEAIEIFSVMEENIKLDTE 481
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++NS+I CK+ R + A M+ + N+ TY L+ G +
Sbjct: 482 NYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGII 526
>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 145/341 (42%), Gaps = 49/341 (14%)
Query: 212 NLDFM-----KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
+L+FM KP+++ L C + + A KV+E M G+ P+ +S+ FL
Sbjct: 84 HLEFMVEKGQKPDVFQATQLLYDLCKTCK-MRKAIKVMEMMIGSGIIPDAASYTFLVSSL 142
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
KG ++L M E+G+ + Y+SL+ G LC+ G N+ QS
Sbjct: 143 CRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRG---------------LCMHG-NLTQS 186
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
+++ +Q G L P+ + F + +A G +D+
Sbjct: 187 -------LQLLDRLIQKG--------------LVPNAY----TYSFLLEAAYKERG-ADE 220
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A +LDE+ A G L Y L CKE RT +A QL ++ S G +V +Y+ L+
Sbjct: 221 ASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLR 280
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ ++ A L +M +Y ++ L + R E L+E++ R +
Sbjct: 281 SLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIR-ARFK 339
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+N II CK +++ + L +M++ PN+ TY
Sbjct: 340 PTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTY 380
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 140/345 (40%), Gaps = 25/345 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN Y + LE Y + +A K+++ + G +PN S+ L +G E ++
Sbjct: 200 PNAYTYSFLLEAA-YKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQ 258
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L + GFS +V Y+ L+ G E A+ +LL G+ E+S S TY ++
Sbjct: 259 LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEAN--VLLAEMDGD-ERSP-STVTYNILI 314
Query: 338 KGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+G + ++ E + +P+ S II+ D LD+M
Sbjct: 315 GSLTLHGRTEHALEVLEEMIRARFKPTA-----SSYNPIIARLCKDRKVDLVVKCLDQMM 369
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
C+ G Y + C+E EA ++ + + Y +I + +
Sbjct: 370 YRHCNPNEGTY-NAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTY 428
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-----DPRVEVKTH 510
AF L +M + +Y +++ GL M L+E +E + +++ T
Sbjct: 429 PAFQLLYEMTKYGFTPDSFTYSSLIRGL-------CMEGMLNEAIEIFSVMEENIKLDTE 481
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++NS+I CK+ R + A M+ + N+ TY L+ G +
Sbjct: 482 NYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGII 526
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 16/314 (5%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G+ PN S+ + + K ++ M + GF+ V ++ L+ GY K G++E+A
Sbjct: 397 GISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENA 456
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV---KGLANLIIEAQKLEPSGIVVD 367
+I + N+ +D T ++KG + G + L N + +Q P+ + +
Sbjct: 457 F-SIFHRMKDANILPTD---TTLGIIIKGLCKAGRSFEGRDLFNKFV-SQGFVPTCMPYN 511
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+ I +NL A ++ EM G + Y + +CK + A +L+
Sbjct: 512 TIIDGFIKEGNINL-----ASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLN 566
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME-N 486
D+ GL++D+ Y LI+ +D +SA L ++R A + + Y +++TG N
Sbjct: 567 DMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMN 626
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ E + + V E ++KT + S+I K+GRL A M+ P+D+
Sbjct: 627 NVEEAIDLYKKMVNEGIPCDLKT--YTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRA 684
Query: 547 YLSLINGYVTAEQY 560
+ LING Q+
Sbjct: 685 HTVLINGLCNKGQF 698
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 159/387 (41%), Gaps = 45/387 (11%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A ++ M G P E +F + +G + + L+ M G S + +SL+
Sbjct: 212 ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMK 271
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNV----------- 346
GY GNL SA + + +S +K TY ++ G +NGN+
Sbjct: 272 GYCMQGNLRSALVLV------NEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMK 325
Query: 347 -KGLA------NLIIEA----QKLEPSGIVVDRSVGFGI---------ISACVNLGLSDK 386
KG+ N I+E Q + + + + ++ G+ +S G ++
Sbjct: 326 TKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNE 385
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A ++ DE+ A G S + Y + +C++ A ++ ++ +G + + L++
Sbjct: 386 ACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMD 445
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
D ++AFS+F M++A I + I+ GL + R ++ V V
Sbjct: 446 GYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVP 505
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+N+II F K G + A R M + P+ TY SLI+G+ L +
Sbjct: 506 T-CMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKL 564
Query: 567 WHEIKRKISTDGQK-GIKFEHNLVDAF 592
+++KRK G K IK L+D F
Sbjct: 565 LNDMKRK----GLKMDIKAYGTLIDGF 587
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 118/279 (42%), Gaps = 15/279 (5%)
Query: 169 FKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALE 228
F ++ F+P + ++D K N V+ E C + + P+ + ++
Sbjct: 498 FVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI-------TPSTVTYTSLID 550
Query: 229 GCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFS 288
G C G ++ A K++ M G++ + ++G L + + + EL + + G S
Sbjct: 551 GFCKG-NNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLS 609
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKG 348
Y+S+I+G+ + N+E A + E +TY ++ G L++G +
Sbjct: 610 PNRFIYNSMITGFKNMNNVEEAIDLYKKMVN----EGIPCDLKTYTSLIDGLLKSGRLLY 665
Query: 349 LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
+++ E + GI+ D +I+ N G + A IL++MN + +Y
Sbjct: 666 ASDIHTE---MLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNT 722
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ + KE EA +L ++ GL D YD L+
Sbjct: 723 LIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 110/283 (38%), Gaps = 47/283 (16%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKG 339
M E G + V Y+SLI G+ K N++ A + + +M++ + Y ++ G
Sbjct: 533 MCEVGITPSTVTYTSLIDGFCKGNNIDLALKLL------NDMKRKGLKMDIKAYGTLIDG 586
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
F + ++K L+ E L +G+ +R + +I+ N+ ++A + +M G
Sbjct: 587 FCKRRDMKSAHELLNE---LRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI 643
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
L Y + K R A+ + ++ S G+ D + LI F++A
Sbjct: 644 PCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARK 703
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAF 519
+ DM +N P ++ +N++I
Sbjct: 704 ILEDMNG------------------KNMIPSVLI------------------YNTLIAGH 727
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
K G L++A R M+ P++ TY L+NG + FS
Sbjct: 728 FKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDGNFS 770
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 62/159 (38%), Gaps = 1/159 (0%)
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+E EA Q + + G++LD Y + + A SL R+MR A +G
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
++ +++T ++ D++V + + S++ +C G L A +
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGK-SMNLAVATSLMKGYCMQGNLRSALVLVNE 288
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ PN TY LI+G + E+K K
Sbjct: 289 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTK 327
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 163/420 (38%), Gaps = 83/420 (19%)
Query: 191 NSNFVAFLKVFEECCRIALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEK 242
N N V + E+ C +DE ++ ++ P+I + NA L+G C + D E+
Sbjct: 180 NCNLVVS-AICEQGC---VDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMA-KRWDDVEE 234
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
++ M +G PN ++F L GL E++ E S M E G + + Y+++I G
Sbjct: 235 LMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGIC 294
Query: 303 KLGNLESAS------------------RTIL--LCLGGGNMEQSDFSKETYCE------- 335
K G+ E A+ T+L LC E D E + E
Sbjct: 295 KDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDV 354
Query: 336 ----VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+V F QNG V + L+ Q LE G + D +I+ GL D+A +L
Sbjct: 355 TFNILVDFFCQNGLVDRVIELL--EQMLE-HGCIPDVITYTTVINGFCKEGLVDEAVMLL 411
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
M+ACGC Y LK C+ R +A +L+ + G + ++ LI
Sbjct: 412 KNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKK 471
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ A L + M L+ P+L++
Sbjct: 472 GLVEQAIELLKQM------------------LVNGCSPDLIS------------------ 495
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
++++I KAG+ E+A L MI PN Y S+ + + ++ M+ I+
Sbjct: 496 YSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQ 555
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 108/231 (46%), Gaps = 10/231 (4%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
GL ++ H L +M GC+ L +Y + CK+ A ++ + S GL+ +V Y
Sbjct: 262 GLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCY 321
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ +++ +++ ++ A L +M + ++ ++ +N + + L++++E
Sbjct: 322 NTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 381
Query: 502 DPRV-EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+ +V T + ++I+ FCK G +++A L+ M +PN +Y ++ G AE+
Sbjct: 382 HGCIPDVIT--YTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAER- 438
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
W + + IS Q+G + + + K G + ++++++
Sbjct: 439 ------WVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQ 483
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 104/287 (36%), Gaps = 41/287 (14%)
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
F I+ + GL A ++LDEM GC+ + L+A C+ A + + + +
Sbjct: 112 FPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHA 171
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR--- 488
G LD GN + ++ A L R + SY ++ GL R
Sbjct: 172 KGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDD 231
Query: 489 -------------PELMAAF-----------LDEVVEDPRVEVKTHD-------WNSIIH 517
P +A F L E V + ++ H + +II
Sbjct: 232 VEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIID 291
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTD 577
CK G E A L RM +PN Y +++ G +AE+ W E + ++
Sbjct: 292 GICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAER-------WEEAEDLLAEM 344
Query: 578 GQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
Q+ + + + + G D V++++E+ E D Y
Sbjct: 345 FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITY 391
>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 766
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 179/443 (40%), Gaps = 66/443 (14%)
Query: 152 MRN-ANTAAPAF-ALVKCMFKNR---------------YFMPFELWGGFLVDICRKNSNF 194
M+N A AP F AL+ C+ +N P + G L++ K+
Sbjct: 286 MKNKAPLEAPPFNALLSCLGRNMNIGRMNALVLKMDEMKIRPDVVTLGILINTLCKSRRV 345
Query: 195 VAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
L+VFE+ C D+ + +K + N ++G C + + +AE+++ M
Sbjct: 346 DEALQVFEQMCGKRTDDG-NVIKADSIHFNTLIDGLC-KVGRLKEAEELLVRMK------ 397
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
++E+ V V Y+ LI GY + G LE+A +
Sbjct: 398 ----------------MEERCV------------PNTVTYNCLIDGYCRAGKLETAKEVV 429
Query: 315 LLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
M++ + T +V G ++ GL ++ +E G+ +
Sbjct: 430 ------SRMKEDGIKPDVVTVNTIVGGMCRH---HGLNMAVLFFMDMEKEGVKGNVVTYM 480
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
+I AC +L +KA D+M GCS +Y + C+ R +A ++V +
Sbjct: 481 TLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREG 540
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G LD+ Y+ LI + + + + DM + + +Y T+++ ++ E +
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESV 600
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM-IFLQFEPNDQTYLSLI 551
++++ ED ++ + ++I A+C G L +A + + M + + PN Y LI
Sbjct: 601 ERMMEQMRED-ELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNILI 659
Query: 552 NGYVTAEQYFSVLMMWHEIKRKI 574
N + + L + E+K K+
Sbjct: 660 NAFSKLGNFGQALSLKEEMKMKM 682
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 118/300 (39%), Gaps = 40/300 (13%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D TV+T++G M + A +FM E G N V ++ +
Sbjct: 440 DVVTVNTIVGGMCRHHGLNMAVL---------FFMDMEKEG--------VKGNVVTYMTL 482
Query: 201 FEECCRIALDEN----LDFM-----KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG 251
CC ++ E D M P+ A + G C ++ DA +V+E + G
Sbjct: 483 IHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQ-VRRDHDAIRVVEKLREGG 541
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
+ ++ L L+ K EK+ E+ + M + G + Y++LIS + K + ES
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVE 601
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA---QKLEPSGIVVDR 368
R + ++ D + TY V++ + G + L + K+ P+ ++ +
Sbjct: 602 RM----MEQMREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNI 657
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+I+A LG +A S+ +EM + Y K KE AE +MD
Sbjct: 658 -----LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL-KEKNQAETLLKLMD 711
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 165/389 (42%), Gaps = 24/389 (6%)
Query: 183 FLVDICRKN--SNFVAFLKVFEECCRIAL-DENLDFM--------KPNIYACNAALEGCC 231
FL+D+ +K ++ V + + CR L E + M KP ++ NA + G C
Sbjct: 207 FLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLC 266
Query: 232 YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQM 291
+ V A+ V M +G+ P+ +++ L + ++ S M G S +
Sbjct: 267 KKGRYVR-AKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDL 325
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGL 349
+ +SSLI + G+L+ A +M+ S + Y ++ G+ +NG +
Sbjct: 326 ISFSSLIGVSSRNGHLDQALMYFR------DMKTSGLVPDNVIYTILINGYCRNGMMS-- 377
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
L I + LE G +D I++ L A+++ DEM G +
Sbjct: 378 EALEIRDKMLE-QGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTL 436
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ +CKE +A L ++ ++ D+ Y+ LI+ + + + A L+ +M +I
Sbjct: 437 IHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKI 496
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+ SY ++ G DE++ ++ N++I +C++G L A
Sbjct: 497 FPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKG-IKPTLVTCNTVIKGYCRSGDLSKAD 555
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
L +MI P+ TY +LING+V E
Sbjct: 556 EFLGKMISEGVGPDSITYNTLINGFVKGE 584
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 137/342 (40%), Gaps = 81/342 (23%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ A N L G C + ++DA + + M GV P+ +F L + + +G K + L
Sbjct: 394 DVVAYNTILNGLCKK-KLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSL 452
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
+M + +V Y+ LI G+ K +E A+ E + E++
Sbjct: 453 FGIMTQKNIKPDIVTYNILIDGFCKTTEMEKAN-------------------ELWNEMI- 492
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNLGLSDKAHSILDEMNAC 397
++K+ P+ I + I ++ NLG +A + DEM
Sbjct: 493 -----------------SRKIFPNHI------SYAILVNGYCNLGFVSEAFRLWDEMIRK 529
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G L +K YC+ ++A + + + S G+ D Y+ LI + + A
Sbjct: 530 GIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKA 589
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
F L M + KG ++T +N I++
Sbjct: 590 FFLINKM------ETKGLQPDVVT------------------------------YNVILN 613
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
FC+ GR+++A+ LR+MI +P+ TY +LINGYV+ +
Sbjct: 614 GFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDN 655
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 160/429 (37%), Gaps = 81/429 (18%)
Query: 182 GFLVDICRKNSNFVAFLK---------VFEECCRIALDENLDFMKPNIYACNAALEGCCY 232
GFLV I NS +K V+ E R ++ N+Y N + C
Sbjct: 145 GFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIE-------LNVYTLNIMVNALCK 197
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV 292
+ D + + M G+ + ++ L Y +GL + E+ + M+ G +
Sbjct: 198 D-HKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLF 256
Query: 293 FYSSLISGYVKLGNLESAS------------------RTILL--CLGGGNMEQSD-FSKE 331
Y+++I+G K G A T+L+ C +E D FS
Sbjct: 257 TYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDM 316
Query: 332 TYCEVVKGFLQNGNVKGLAN-------LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
+ V + ++ G+++ ++ + ++ SG+V D + +I+ G+
Sbjct: 317 LHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMM 376
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
+A I D+M GC++ + Y L CK+ A+A L ++ G+ D + L
Sbjct: 377 SEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTL 436
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I + A SLF IMT +N +P+++
Sbjct: 437 IHGHCKEGNMGKALSLF----------------GIMT--QKNIKPDIVT----------- 467
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+N +I FCK +E A MI + PN +Y L+NGY
Sbjct: 468 -------YNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAF 520
Query: 565 MMWHEIKRK 573
+W E+ RK
Sbjct: 521 RLWDEMIRK 529
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 103/267 (38%), Gaps = 65/267 (24%)
Query: 335 EVVKGFLQNGNVKGLANLI--------IEAQKLE--PSGIVVDRSVGFGI-ISAC----- 378
E+V+ + + G+ NL+ ++A+KL + R GF + I+AC
Sbjct: 99 EIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLG 158
Query: 379 --VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
V +G D A + +E+ G + + + A CK+H+ + ++D+ G+
Sbjct: 159 GLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFA 218
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
D+ Y+ LI A AF + M KG T+ T
Sbjct: 219 DIVTYNTLINAYCREGLLGEAFEVMNSMSG------KGLKPTLFT--------------- 257
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI----- 551
+N++I+ CK GR AK M+ + P+ TY +L+
Sbjct: 258 ---------------YNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCR 302
Query: 552 -NGYVTAEQYFSVLMMWHEIKRKISTD 577
N ++ A+ FS ++ R +S D
Sbjct: 303 NNNFLEAKDIFSDML-----HRGVSPD 324
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 192/487 (39%), Gaps = 33/487 (6%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
++ S T ++ + D+A+ ++ + + P+ +S+IA L Q
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
S+V KN + + +T ++++ ++ A +K M + P + L+D
Sbjct: 258 TSMV----KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMD 312
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDAEKVIE 245
KN K+F+ + L KP I L+G Y + ++ + +++
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGL-------KPEITTYGTLLQG--YATKGALVEMHGLLD 363
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M G+ PN F L YA +G ++ + + S M + G + V Y ++I K G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423
Query: 306 NLESASR----TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
+E A R I L GN+ Y ++ LI+E +
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNI--------VYNSLIHSLCIFDKWDKAKELILE---MLD 472
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
GI +D II + G ++ + D M G + Y + YC + E
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
AT+L+ + S G++ D Y+ LI + A LFR+M + + +Y I+
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592
Query: 482 GLMENHRPELMAAFLDEVVED-PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL + R + E ++E+ T +N I+H CK ++A R + +
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELST--YNIILHGLCKNNLTDEALRMFQNLCLTDL 650
Query: 541 EPNDQTY 547
+ +T+
Sbjct: 651 QLETRTF 657
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 159/401 (39%), Gaps = 59/401 (14%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D ++P++ N+ ++ C ++A K+ ++M+ G++P +++G L YA KG
Sbjct: 298 DGVEPDVVTYNSLMDYLCKN-GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET- 332
++ L LM G +S LI Y K G ++ A M Q + +T
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF------SKMRQQGLNPDTV 410
Query: 333 -YCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
Y V+ ++G V+ + ++L P IV + I S C+ DKA
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL----IHSLCI-FDKWDKAKE 465
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
++ EM G + + + ++CKE R E+ +L + G++ D+ Y LI+
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
+ A L M + G+ +P+ +
Sbjct: 526 LAGKMDEATKLLASM--------------VSVGM----KPDCVT---------------- 551
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+N++I+ +CK R+EDA R M P+ TY ++ G + + ++
Sbjct: 552 --YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
I + G + E + + L+ L K D +++ +
Sbjct: 610 IT-------ESGTQLELSTYNIILHGLCKNNLTDEALRMFQ 643
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 156/363 (42%), Gaps = 27/363 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ ++ + C Q++ A +V+ +M GV PN ++ + + Y G ++ +
Sbjct: 232 PNVVTYSSIIAALCKA-QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIG 290
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
M+ G +V Y+SL+ K G A + +M + E TY
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF------DSMTKRGLKPEITTYGT 344
Query: 336 VVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+++G+ G + GL +L++ +GI + V +I A G D+A +
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVR------NGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN--YDALIEASIT 450
+M G + Y + CK R +A + + +L GN Y++LI +
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE--RLSPGNIVYNSLIHSLCI 456
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ A L +M + I + +I+ + R D +V R+ VK
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV---RIGVKPD 513
Query: 511 --DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
++++I +C AG++++A + L M+ + +P+ TY +LINGY + L+++
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573
Query: 569 EIK 571
E++
Sbjct: 574 EME 576
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 143/345 (41%), Gaps = 44/345 (12%)
Query: 227 LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-----QEKIVELESL 281
L+G C ++ + V+ M+ LG PN S+ L LKGL ++ +EL +
Sbjct: 133 LKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL-----LKGLCDDNRSQEALELLQM 187
Query: 282 MNEFG--FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV-K 338
M + G +V Y+++I+G+ K G+L+ A TY E++ +
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKA-------------------YGTYHEMLDR 228
Query: 339 GFLQN-GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC----------VNLGLSDKA 387
G L N + + +AQ ++ + V+ V G++ C + G +A
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
L +M++ G + Y + CK R EA ++ ++ GL+ ++ Y L++
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
T L M I+ + ++ + + + A + + +
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD-QAMLVFSKMRQQGLNP 407
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
T + ++I CK+GR+EDA R +MI + P + Y SLI+
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 170/442 (38%), Gaps = 66/442 (14%)
Query: 167 CMFKNRYFMPFELWG-----GFLVDICRKNSNFVAFLKVFEECC-----RIALDENLDFM 216
C R + F G GF+VD +AF + + C A+D L M
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFIVDA-------IAFTPMLKGLCADKRTSDAMDIVLRRM 153
Query: 217 K-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG--VRPNESSFGFLAYLYALK 269
PN+++ N L+G C +S +A ++++ M G P+ S+ + + +
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDDNRS-QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
G +K M + G +V YSS+I+ K ++ A + + G M
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC--- 269
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
TY +V G+ +G K + +K+ G+ D ++ G +A
Sbjct: 270 -RTYNSIVHGYCSSGQPKEAIGFL---KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ D M G + Y L+ Y + E L+ + +G+ + + LI A
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-------- 501
A +F MR+ + +Y T++ L ++ R E + +++++
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445
Query: 502 --------------------------DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
D + + T +NSII + CK GR+ ++++ M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505
Query: 536 IFLQFEPNDQTYLSLINGYVTA 557
+ + +P+ TY +LI+GY A
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLA 527
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 52/244 (21%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V ++EK+ + M +GV+P+ ++ L Y L G ++ +L + M G V Y++
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
LI+GY K+ +E A +L ME S S + TY +++G Q L +
Sbjct: 555 LINGYCKISRMEDA--LVLF----REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
GI + L LS Y L C
Sbjct: 609 ------------------GITESGTQLELS--------------------TYNIILHGLC 630
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT------SQDFQSAFSLFRDMREAR 468
K + T EA ++ ++ + LQL+ ++ +I A + ++D +A S + + R
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 469 IYDL 472
Y L
Sbjct: 691 TYSL 694
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 192/487 (39%), Gaps = 33/487 (6%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
++ S T ++ + D+A+ ++ + + P+ +S+IA L Q
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
S+V KN + + +T ++++ ++ A +K M + P + L+D
Sbjct: 258 TSMV----KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMD 312
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDAEKVIE 245
KN K+F+ + L KP I L+G Y + ++ + +++
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGL-------KPEITTYGTLLQG--YATKGALVEMHGLLD 363
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M G+ PN F L YA +G ++ + + S M + G + V Y ++I K G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423
Query: 306 NLESASR----TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
+E A R I L GN+ Y ++ LI+E +
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNI--------VYNSLIHSLCIFDKWDKAKELILE---MLD 472
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
GI +D II + G ++ + D M G + Y + YC + E
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
AT+L+ + S G++ D Y+ LI + A LFR+M + + +Y I+
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592
Query: 482 GLMENHRPELMAAFLDEVVED-PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL + R + E ++E+ T +N I+H CK ++A R + +
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELST--YNIILHGLCKNNLTDEALRMFQNLCLTDL 650
Query: 541 EPNDQTY 547
+ +T+
Sbjct: 651 QLETRTF 657
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 96/496 (19%), Positives = 192/496 (38%), Gaps = 72/496 (14%)
Query: 121 NLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELW 180
+L +A+ + ++++ L + T +++ ++ A A ++ M KN +
Sbjct: 214 DLDKAYGTYHEMLDRGI-LPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 181 GGFLVDICRKNS--NFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVS 238
+ C + FLK D ++P++ N+ ++ C + +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHS----------DGVEPDVVTYNSLMDYLCKNGR-CT 321
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+A K+ ++M+ G++P +++G L YA KG ++ L LM G +S LI
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEA 356
Y K G ++ A M Q + +T Y V+ ++G V+ +
Sbjct: 382 CAYAKQGKVDQAMLVF------SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 357 --QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
++L P IV + I S C+ DKA ++ EM G + + + ++C
Sbjct: 436 IDERLSPGNIVYNSL----IHSLCI-FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
KE R E+ +L + G++ D+ Y LI+ + A L M
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM---------- 540
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+ G+ +P+ + +N++I+ +CK R+EDA R
Sbjct: 541 ----VSVGM----KPDCVT------------------YNTLINGYCKISRMEDALVLFRE 574
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY 594
M P+ TY ++ G + + ++ I + G + E + + L+
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT-------ESGTQLELSTYNIILH 627
Query: 595 ALVKGGFFDAVMQVVE 610
L K D +++ +
Sbjct: 628 GLCKNNLTDEALRMFQ 643
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 109/277 (39%), Gaps = 31/277 (11%)
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL- 436
C + SD +L M GC + Y LK C E+R+ EA +L+ + G
Sbjct: 137 CADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP 196
Query: 437 -DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
DV +Y +I D A+ + +M + I +Y +I+ L + +
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEV 256
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI---- 551
L +V++ V +NSI+H +C +G+ ++A L++M EP+ TY SL+
Sbjct: 257 LTSMVKNG-VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315
Query: 552 -NGYVTAEQYFSVLMMWHEIKRKISTDG-----------------------QKGIKFEHN 587
NG T + M +K +I+T G + GI H
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 588 LVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ + A K G D M V K ++ + D Y
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 143/345 (41%), Gaps = 44/345 (12%)
Query: 227 LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-----QEKIVELESL 281
L+G C ++ + V+ M+ LG PN S+ L LKGL ++ +EL +
Sbjct: 133 LKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL-----LKGLCDENRSQEALELLQM 187
Query: 282 MNEFG--FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV-K 338
M + G +V Y+++I+G+ K G+L+ A TY E++ +
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKA-------------------YGTYHEMLDR 228
Query: 339 GFLQN-GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC----------VNLGLSDKA 387
G L N + + +AQ ++ + V+ V G++ C + G +A
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
L +M++ G + Y + CK R EA ++ ++ GL+ ++ Y L++
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
T L M I+ + ++ + + + A + + +
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD-QAMLVFSKMRQQGLNP 407
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
T + ++I CK+GR+EDA R +MI + P + Y SLI+
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 146/382 (38%), Gaps = 56/382 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS---FGFLAYLYALKGL--- 271
PN+++ N L+G C D + E + +L + P++ ++Y + G
Sbjct: 160 PNVFSYNILLKGLC-------DENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 272 --QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
+K M + G +V YSS+I+ K ++ A + + G M
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC--- 269
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
TY +V G+ +G K + +K+ G+ D ++ G +A
Sbjct: 270 -RTYNSIVHGYCSSGQPKEAIGFL---KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ D M G + Y L+ Y + E L+ + +G+ + + LI A
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-------- 501
A +F MR+ + +Y T++ L ++ R E + +++++
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445
Query: 502 --------------------------DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
D + + T +NSII + CK GR+ ++++ M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505
Query: 536 IFLQFEPNDQTYLSLINGYVTA 557
+ + +P+ TY +LI+GY A
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLA 527
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 52/244 (21%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V ++EK+ + M +GV+P+ ++ L Y L G ++ +L + M G V Y++
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
LI+GY K+ +E A +L ME S S + TY +++G Q L +
Sbjct: 555 LINGYCKISRMEDA--LVLF----REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
GI + L LS Y L C
Sbjct: 609 ------------------GITESGTQLELS--------------------TYNIILHGLC 630
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT------SQDFQSAFSLFRDMREAR 468
K + T EA ++ ++ + LQL+ ++ +I A + ++D +A S + + R
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 469 IYDL 472
Y L
Sbjct: 691 TYSL 694
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 147/358 (41%), Gaps = 15/358 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP A NA L+G + S+ +AE+V++ MS GV P+E+++ L Y G E
Sbjct: 288 IKPRTRAYNALLKGYV-KIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 346
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L M G +S +++G+ G + A + G F Y
Sbjct: 347 RILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHF----YNV 402
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ F G L + + ++ GI D +I A G D+A + DEM
Sbjct: 403 MIDTF---GKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMR 459
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
C +G Y + +E R ++ ++ GL ++ Y L++ S F+
Sbjct: 460 ESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFK 519
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR---VEVKTHDW 512
A D EA D T+ L+ + +A VV+ R +E T
Sbjct: 520 EAV----DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVL 575
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
NS+I+AF + R+ +A L+ M P+ TY +L+ + EQ+ V +++ E+
Sbjct: 576 NSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEM 633
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 4/214 (1%)
Query: 362 SGIVVDRSVGF-GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
+G + R+ + ++ V +G A +LDEM+ CG + Y + AY + R
Sbjct: 285 AGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWE 344
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY-LTI 479
A L+ ++ + G++ + ++ ++Q AF++ R+M + + + Y + I
Sbjct: 345 SARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMI 404
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
T N M AF D + E+ +E WN++I A CK GR + A M
Sbjct: 405 DTFGKYNCLGHAMDAF-DRMREE-GIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN 462
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
TY +IN +++ V M E+K +
Sbjct: 463 CPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQ 496
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 158/433 (36%), Gaps = 53/433 (12%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
D A + S A L P +LI+ L S + + F E P+ +
Sbjct: 238 DAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNA 297
Query: 145 V---HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
+ + +GS++NA + +C P E LVD + +
Sbjct: 298 LLKGYVKIGSLKNAEQVLDEMS--QCGVA-----PDEATYSLLVDAYTRAGRW------- 343
Query: 202 EECCRIALDE-NLDFMKPNIYACNAALEGCCYGLQSVSDAEK---VIETMSVLGVRPNES 257
E RI L E D +KP+ Y + L G + + +K V+ M GVRP+
Sbjct: 344 -ESARILLKEMEADGVKPSSYVFSRILAG----FRDRGEWQKAFAVLREMHASGVRPDRH 398
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
+ + + ++ M E G +V +++LI + K G + A
Sbjct: 399 FYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRA------- 451
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE----------PSGIVVD 367
+E D +E+ C L + NL+ E Q+ E G+V +
Sbjct: 452 -----IELFDEMRESNCP-----LGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPN 501
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
++ G +A ++ M A G +Y + AY + A +V
Sbjct: 502 IITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVK 561
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ + GL+ ++LI A + AFS+ + M+E + +Y T+M L+
Sbjct: 562 AMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVE 621
Query: 488 RPELMAAFLDEVV 500
+ E + +E++
Sbjct: 622 QFEKVPVIYEEMI 634
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 140/372 (37%), Gaps = 71/372 (19%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PN+Y N + C G +A ++ M G PN ++ L + G +
Sbjct: 184 DGVAPNVYTYNILVRALC-GRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVD 242
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR------------------TIL 315
L +M E G +V ++S+++G K G +E A + T++
Sbjct: 243 GAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLV 302
Query: 316 --LCLGGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
C G + E E T+ ++ + GN++ L+ +++
Sbjct: 303 GGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLV---RQMRER 359
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G+ ++ +I G D A + M C + Y + YC R EA
Sbjct: 360 GLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEA 419
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+L+ ++ + GL+ DV Y +I A + D SAF L + M E KG +T
Sbjct: 420 RELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE------KGVLPDAIT- 472
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
++S+I C RL DA + MI L +P
Sbjct: 473 -----------------------------YSSLIRVLCGEKRLSDAHVLFKNMIKLGLQP 503
Query: 543 NDQTYLSLINGY 554
++ TY SLI+G+
Sbjct: 504 DEFTYTSLIDGH 515
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 139/343 (40%), Gaps = 54/343 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KPN+ N+ + G C + DA KV + M G+ P+ S+ L Y G +
Sbjct: 256 LKPNLVTFNSMVNGMCKA-GKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEA 314
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSK--ET 332
+ + + M + G +V ++SLI K GNLE A + + G M + F+ +
Sbjct: 315 LSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDG 374
Query: 333 YCEVVKGFLQNG--NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
+C+ KGFL + V+G+ +++PS + + +I+ +G D+A +
Sbjct: 375 FCK--KGFLDDALLAVRGMKQC-----RIKPSVVCYN-----ALINGYCMVGRMDEAREL 422
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L EM A G + Y + AYCK T A +L + G+ D Y +LI
Sbjct: 423 LHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCG 482
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ A LF++M I GL DE
Sbjct: 483 EKRLSDAHVLFKNM--------------IKLGLQP-----------DEFT---------- 507
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ S+I CK G +E A +M+ P+ TY LING
Sbjct: 508 -YTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLING 549
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 137/356 (38%), Gaps = 80/356 (22%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ A NA L S++ A + ++M GV PN ++ L +G +++ +
Sbjct: 154 PSVLAYNAVLLA--LSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 211
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M G +V Y++L++ + + G ++ A R +
Sbjct: 212 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLV----------------------- 248
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G ++ G +K +V S+ G+ A G + A + DEM
Sbjct: 249 -GMMREGGLK--------------PNLVTFNSMVNGMCKA----GKMEDARKVFDEMVRE 289
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + Y + YCK + EA + +++ G+ DV + +LI + + + A
Sbjct: 290 GLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERA 349
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+L R MRE GL N EV + ++I
Sbjct: 350 VTLVRQMRE--------------RGLQMN-----------EVT-----------FTALID 373
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
FCK G L+DA +R M + +P+ Y +LINGY + + HE++ K
Sbjct: 374 GFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK 429
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 20/218 (9%)
Query: 406 YVPTLKAY------CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
YVP++ AY + A + + S G+ +V Y+ L+ A + A S
Sbjct: 152 YVPSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 211
Query: 460 LFRDMREARIYDLKGSYLTIMTGLM---ENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
+ RDMR A +Y T++ E E + + E P + +NS++
Sbjct: 212 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVT----FNSMV 267
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+ CKAG++EDA++ M+ P+ +Y +L+ GY A L ++ E+
Sbjct: 268 NGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT----- 322
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
QKGI + + ++ + K G + + +V + +E
Sbjct: 323 --QKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRE 358
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 211/507 (41%), Gaps = 60/507 (11%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLS---------SLQDNHNLKRAFASVV------ 130
EA+ F+ A P+ N++I L +L D+ + F V
Sbjct: 48 EAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTL 107
Query: 131 -------YVIEKNPKLLDFQ----------TVHTLLGSMRNANTAAPAFALVKCMFKNRY 173
+ ++K KLL+ T +TL+ ++ + AF+L++ M N
Sbjct: 108 IDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAAN-- 165
Query: 174 FMPFEL--WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCC 231
P EL +G + +C++ AF +V +E I + P++ N+ L+G C
Sbjct: 166 GCPPELITFGLIIKGLCKEGEIEAAF-RVVDEMFMIE-----SGLSPDVITFNSVLDGLC 219
Query: 232 YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQM 291
Q + DA V + G RPN ++ L + ++ ++L + M E G +
Sbjct: 220 KE-QRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANT 278
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK---G 348
V YS+++ G +K+G +E A + G + + TY ++ GF + ++ G
Sbjct: 279 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDA----VTYNTLIDGFFKRQRLREAVG 334
Query: 349 LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
L ++EA PS +V ++ G+ + G D+A ILD M A GC+ Y
Sbjct: 335 LLREMLEA-GFHPS-VVTYTTLCHGLCRS----GRFDEAVEILDYMAARGCAPNAITYSS 388
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGL-QLDVGNYDALIEASITSQDFQSAFS-LFRDMRE 466
+ CK R EA ++ + V Y ALI+ + A+ L R +R
Sbjct: 389 IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRA 448
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
RI D+ ++ ++ GL + R + + E V + +++ C+A R++
Sbjct: 449 GRIPDVV-TFSILINGLCDAGRIDTGLELFRGMAERGCVP-DMVTYATLVDRLCRASRVD 506
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLING 553
+A ++M P+ T ++I+G
Sbjct: 507 EAFDLFQQMRSDGLSPDRSTRRTMIHG 533
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 153/394 (38%), Gaps = 45/394 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P + + ++G C V K++E M+ G PN ++ L +G ++
Sbjct: 98 RPTVVTYSTLIDGLCRD-HEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAF 156
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
L M G +++ + +I G K G +E+A R + M +S S + T+
Sbjct: 157 SLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMF----MIESGLSPDVITFN 212
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
V+ G + + N+ A + VV S +I + D+A +L +M
Sbjct: 213 SVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST---LIDGLSKMAKMDEALQLLAKM 269
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
GC Y + K R +A ++ + +G D Y+ LI+ Q
Sbjct: 270 VELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRL 329
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-------PELMAA------------- 494
+ A L R+M EA + +Y T+ GL + R + MAA
Sbjct: 330 REAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSI 389
Query: 495 ---------------FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ +++ D V ++++I CKAG++++A L RMI
Sbjct: 390 VDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAG 449
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
P+ T+ LING A + + L ++ + +
Sbjct: 450 RIPDVVTFSILINGLCDAGRIDTGLELFRGMAER 483
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 100/263 (38%), Gaps = 8/263 (3%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ DA V+ M G P+ ++ L + + + V L M E GF +V Y++
Sbjct: 294 MEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTT 353
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
L G + G + A + G + TY +V G + G V
Sbjct: 354 LCHGLCRSGRFDEAVEILDYMAARGCAPNA----ITYSSIVDGLCKAGRVTEALGYF--- 406
Query: 357 QKLEPSGIVVDRSVGF-GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
+K+ +V + + +I G D+A+ L+ M G + + + C
Sbjct: 407 EKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCD 466
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
R +L ++ G D+ Y L++ + AF LF+ MR + + +
Sbjct: 467 AGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRST 526
Query: 476 YLTIMTGLMENHRPELMAAFLDE 498
T++ GL+E +R E DE
Sbjct: 527 RRTMIHGLLEVNRDEDAKRIQDE 549
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 3/158 (1%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ CK + +A L + + DV Y ALI+ + + A+ LF + R
Sbjct: 2 IDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGC 61
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+ +Y T++ GL + R E D++ ++++I C+ ++
Sbjct: 62 HPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGC 121
Query: 530 RTLRRMIFLQFEPNDQTYLSLIN---GYVTAEQYFSVL 564
+ L M PN TY +L+N G +++ FS+L
Sbjct: 122 KLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLL 159
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 178/416 (42%), Gaps = 30/416 (7%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALK-------GL 271
NIY+ N ++ C +S + ++ LG +P+ +F L + L+ L
Sbjct: 140 NIYSFNILIK-CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALAL 198
Query: 272 QEKIVELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
+VE SL M E G + ++ +++LI+G G + A+ + +G G
Sbjct: 199 FGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG----LHI 254
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY +V G + G+ K NL+ K+E + I D + II G A
Sbjct: 255 DVVTYGTIVNGMCKMGDTKSALNLL---SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 311
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+ EM G + + Y + +C R ++A +L+ D+ + DV ++ALI AS
Sbjct: 312 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 371
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ A L +M I+ +Y +++ G +++R + D ++ P V
Sbjct: 372 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD-LMASPDVVT- 429
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+N+II +C+A R+++ + LR + N TY +LI+G+ + + ++
Sbjct: 430 ---FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 486
Query: 569 EIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
E+ IS G+ + + LY + + +++ E Q K+ +D Y
Sbjct: 487 EM---IS----HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 535
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ YC+ R E QL+ +IS GL + Y+ LI + +A LF++M +
Sbjct: 434 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 493
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+ ++ G EN + E A L EV++ ++++ T +N IIH CK ++++A
Sbjct: 494 CPDTITCNILLYGFCENEKLE-EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 552
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
+ EP+ QTY +I+G+ +++H++K G + +++
Sbjct: 553 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK-------DNGHEPDNSTY 605
Query: 590 DAFLYALVKGGFFDAVMQVVEK 611
+ + +K G D ++++ +
Sbjct: 606 NTLIRGCLKAGEIDKSIELISE 627
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 116/545 (21%), Positives = 202/545 (37%), Gaps = 91/545 (16%)
Query: 63 LTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSS---LQDN 119
L +D + E L + L N DEA + KS++ L PS+ N LI L L+D
Sbjct: 242 LAKDVLLKTEEELGTATL--NVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDA 299
Query: 120 HNLKRAFASVVYVIEKNPKLL--DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPF 177
+L ++E N L D L+ + A A LV M + + +
Sbjct: 300 KSL---------LVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDP 350
Query: 178 ELWGGFLVDICRKNS---------------------NFVAFLKVF--EECCRIALDENLD 214
++ F+ + ++ + + + ++ F E+ R + ++
Sbjct: 351 MMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVE 410
Query: 215 FMKPNI----YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
K NI Y A++G C + A +++ M G RPN + L + K
Sbjct: 411 IKKRNIVISPYTYGTAVKGMCSS-GDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKS 469
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
V + M E G + Y+SLI G K ++ A R+ LL M ++ F
Sbjct: 470 RFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEA-RSFLL-----EMVENGFKP 523
Query: 331 E--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
+ TY + G+++ G A
Sbjct: 524 DAFTYGAFISGYIEAGEFA--------------------------------------SAD 545
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+ EM CG + + YCK+ + EA + G+ D Y L+
Sbjct: 546 KYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGL 605
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ + A +F +MR I SY T++ G + + ++ DE+V+ +
Sbjct: 606 VKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQ-AGLTSN 664
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+N ++ FC++G +E AK L M F PN TY ++I+GY + ++
Sbjct: 665 VIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFD 724
Query: 569 EIKRK 573
E+K K
Sbjct: 725 EMKLK 729
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 149/360 (41%), Gaps = 53/360 (14%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V+DAE++ M G+ P+ S+G L ++ G +K + M + G +S ++ Y+
Sbjct: 611 VNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNM 670
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
L+ G+ + G +E A + G G + TYC ++ G+ ++G++ L E
Sbjct: 671 LLGGFCRSGEIEKAKELLDEMSGKGFPPNA----VTYCTIIDGYCKSGDLAEAFQLFDE- 725
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC---SVGLGVYVPTLKAY 413
++ G+V D V ++ C L ++A +I E N GC S + + +
Sbjct: 726 --MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKF 782
Query: 414 CKEHRTAEATQLVMDISSS--GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
K T + +MD S G DV Y+ +I+ + ++A LF M++A +
Sbjct: 783 GKTELTTDMINRLMDGSFDKFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHHMQKANLMP 841
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVE------------------------------ 501
+Y +++ G + R M + DEV+
Sbjct: 842 TVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLL 901
Query: 502 ---------DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
D ++ +++ F K G +E A++ + M+ L++ P+ T + LIN
Sbjct: 902 DQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELIN 961
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 145/344 (42%), Gaps = 18/344 (5%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP+ + A + G + S A+K ++ M GV PN+ L Y KG K++
Sbjct: 522 KPDAFTYGAFISGYIEAGEFAS-ADKYVKEMLECGVIPNKVLCTGLINEYCKKG---KVI 577
Query: 277 ELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
E S M E G Y+ L++G VK G + A I + G + FS Y
Sbjct: 578 EACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEE-IFHEMRGKGIAPDVFS---Y 633
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ GF + GN++ +++ E + +G+ + + ++ G +KA +LDE
Sbjct: 634 GTLIDGFSKLGNMQKASSIFDE---MVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDE 690
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M+ G Y + YCK AEA QL ++ GL D Y L++ D
Sbjct: 691 MSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLND 750
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTH 510
+ A ++F + E + ++ + + + EL ++ +++ D +
Sbjct: 751 VERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDV 809
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N +I CK G LE AK M P TY SL+NGY
Sbjct: 810 TYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGY 853
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 103/265 (38%), Gaps = 21/265 (7%)
Query: 328 FSKETYCEVVKGFLQNGNVK-------------GLANL-IIEAQKLEPS----GIVVDR- 368
F ++Y ++ ++GNV+ G A L + EA +L+ S G+V R
Sbjct: 222 FDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQ 281
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
S I C L D A S+L EMN+ G Y + K A LV +
Sbjct: 282 SYNLLIDGLCKQKRLED-AKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHE 340
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ S G +D YD I + A +LF M + +Y +++ G
Sbjct: 341 MVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKN 400
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
L E ++ + + + + + + C +G L+ A ++ M PN Y
Sbjct: 401 VRKGYELLVE-IKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYT 459
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRK 573
+LI ++ ++ + + E++ +
Sbjct: 460 TLIKTFLQKSRFGDAVRVLKEMREQ 484
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 17/325 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ + N + G C Q + A V + M G+ P+ ++ L Y G K+
Sbjct: 184 VSPDKFTFNIVISGLCKTGQ-LRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKM 242
Query: 276 VELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
++ L MN+ G S +V ++ LI+GY K N+ +A + M Q
Sbjct: 243 YHVDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVF------EEMRQHGIPANM 296
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY +V G + G V+ L+ E ++L + + SV ++ G+ +A
Sbjct: 297 VTYTSLVSGLCREGKVEDSMKLVEEMEELGLATLPTLNSV----LNGFCKKGMMVEAEGW 352
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+D M G + Y + Y + + EAT ++ G+ DV Y+ LI T
Sbjct: 353 VDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTT 412
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
S D++S L +M+E + +Y ++ L LDE+VE +E K
Sbjct: 413 STDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVE-VGLEPKHR 471
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRM 535
+N+II+ FC+ G + A RM
Sbjct: 472 TYNAIINGFCEKGDAKGAHDIRIRM 496
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 80/182 (43%), Gaps = 2/182 (1%)
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+L EMN G S + + + YCKE A ++ ++ G+ ++ Y +L+
Sbjct: 248 LLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLC 307
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
+ + L +M E + L + +++ G + ++D + + ++
Sbjct: 308 REGKVEDSMKLVEEMEELGLATLP-TLNSVLNGFCKKGMMVEAEGWVDGMAQK-GMKPNV 365
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+N++I + + G++++A M P+ +TY LI G+ T+ + SV + E
Sbjct: 366 VTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDE 425
Query: 570 IK 571
+K
Sbjct: 426 MK 427
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 97/263 (36%), Gaps = 62/263 (23%)
Query: 190 KNSNFVAFLKVFEECCRIALDENL-----------------DFMK----------PNIYA 222
K SN A +KVFEE + + N+ D MK +
Sbjct: 273 KESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLATLPT 332
Query: 223 CNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLM 282
N+ L G C V +AE ++ M+ G++PN ++ L Y G ++ + M
Sbjct: 333 LNSVLNGFCKKGMMV-EAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAM 391
Query: 283 NEFGFSSQMVFYSSLISGYVKLGNLESASRTI--------------------LLCLGGGN 322
G S + Y+ LI+G+ + S S + LC G
Sbjct: 392 AGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEV 451
Query: 323 MEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
+ E TY ++ GF + G+ KG ++ I +K + VV +V
Sbjct: 452 RKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNV- 510
Query: 372 FGIISACVNLGLSDKAHSILDEM 394
+ +G D+A+ +L+EM
Sbjct: 511 --FLKYFCKMGKMDEANVVLNEM 531
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 192/487 (39%), Gaps = 33/487 (6%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
++ S T ++ + D+A+ ++ + + P+ +S+IA L Q
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
S+V KN + + +T ++++ ++ A +K M + P + L+D
Sbjct: 258 TSMV----KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMD 312
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDAEKVIE 245
KN K+F+ + L KP I L+G Y + ++ + +++
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGL-------KPEITTYGTLLQG--YATKGALVEMHGLLD 363
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M G+ PN F L YA +G ++ + + S M + G + V Y ++I K G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423
Query: 306 NLESASR----TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
+E A R I L GN+ Y ++ LI+E +
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNI--------VYNSLIHSLCIFDKWDKAKELILE---MLD 472
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
GI +D II + G ++ + D M G + Y + YC + E
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
AT+L+ + S G++ D Y+ LI + A LFR+M + + +Y I+
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592
Query: 482 GLMENHRPELMAAFLDEVVED-PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL + R + E ++E+ T +N I+H CK ++A R + +
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELST--YNIILHGLCKNNLTDEALRMFQNLCLTDL 650
Query: 541 EPNDQTY 547
+ +T+
Sbjct: 651 QLETRTF 657
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 159/401 (39%), Gaps = 59/401 (14%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D ++P++ N+ ++ C ++A K+ ++M+ G++P +++G L YA KG
Sbjct: 298 DGVEPDVVTYNSLMDYLCKN-GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET- 332
++ L LM G +S LI Y K G ++ A M Q + +T
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF------SKMRQQGLNPDTV 410
Query: 333 -YCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
Y V+ ++G V+ + ++L P IV + I S C+ DKA
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL----IHSLCI-FDKWDKAKE 465
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
++ EM G + + + ++CKE R E+ +L + G++ D+ Y LI+
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
+ A L M + G+ +P+ +
Sbjct: 526 LAGKMDEATKLLASM--------------VSVGM----KPDCVT---------------- 551
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+N++I+ +CK R+EDA R M P+ TY ++ G + + ++
Sbjct: 552 --YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
I + G + E + + L+ L K D +++ +
Sbjct: 610 IT-------ESGTQLELSTYNIILHGLCKNNLTDEALRMFQ 643
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 156/363 (42%), Gaps = 27/363 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ ++ + C Q++ A +V+ +M GV PN ++ + + Y G ++ +
Sbjct: 232 PNVVTYSSIIAALCKA-QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIG 290
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
M+ G +V Y+SL+ K G A + +M + E TY
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF------DSMTKRGLKPEITTYGT 344
Query: 336 VVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+++G+ G + GL +L++ +GI + V +I A G D+A +
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVR------NGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN--YDALIEASIT 450
+M G + Y + CK R +A + + +L GN Y++LI +
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE--RLSPGNIVYNSLIHSLCI 456
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ A L +M + I + +I+ + R D +V R+ VK
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV---RIGVKPD 513
Query: 511 --DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
++++I +C AG++++A + L M+ + +P+ TY +LINGY + L+++
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573
Query: 569 EIK 571
E++
Sbjct: 574 EME 576
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 109/277 (39%), Gaps = 31/277 (11%)
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL- 436
C + SD +L M GC + Y LK C E+R+ EA +L+ + G
Sbjct: 137 CADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP 196
Query: 437 -DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
DV +Y +I D A+ + +M + I +Y +I+ L + +
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEV 256
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI---- 551
L +V++ V +NSI+H +C +G+ ++A L++M EP+ TY SL+
Sbjct: 257 LTSMVKNG-VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315
Query: 552 -NGYVTAEQYFSVLMMWHEIKRKISTDG-----------------------QKGIKFEHN 587
NG T + M +K +I+T G + GI H
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 588 LVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ + A K G D M V K ++ + D Y
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 143/345 (41%), Gaps = 44/345 (12%)
Query: 227 LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-----QEKIVELESL 281
L+G C ++ + V+ M+ LG PN S+ L LKGL ++ +EL +
Sbjct: 133 LKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL-----LKGLCDENRSQEALELLQM 187
Query: 282 MNEFG--FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV-K 338
M + G +V Y+++I+G+ K G+L+ A TY E++ +
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKA-------------------YGTYHEMLDR 228
Query: 339 GFLQN-GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC----------VNLGLSDKA 387
G L N + + +AQ ++ + V+ V G++ C + G +A
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
L +M++ G + Y + CK R EA ++ ++ GL+ ++ Y L++
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
T L M I+ + ++ + + + A + + +
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD-QAMLVFSKMRQQGLNP 407
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
T + ++I CK+GR+EDA R +MI + P + Y SLI+
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 146/382 (38%), Gaps = 56/382 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF---GFLAYLYALKGL--- 271
PN+++ N L+G C D + E + +L + P++ ++Y + G
Sbjct: 160 PNVFSYNILLKGLC-------DENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 272 --QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
+K M + G +V YSS+I+ K ++ A + + G M
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC--- 269
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
TY +V G+ +G K + +K+ G+ D ++ G +A
Sbjct: 270 -RTYNSIVHGYCSSGQPKEAIGFL---KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ D M G + Y L+ Y + E L+ + +G+ + + LI A
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-------- 501
A +F MR+ + +Y T++ L ++ R E + +++++
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445
Query: 502 --------------------------DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
D + + T +NSII + CK GR+ ++++ M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505
Query: 536 IFLQFEPNDQTYLSLINGYVTA 557
+ + +P+ TY +LI+GY A
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLA 527
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 52/244 (21%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V ++EK+ + M +GV+P+ ++ L Y L G ++ +L + M G V Y++
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
LI+GY K+ +E A +L ME S S + TY +++G Q L +
Sbjct: 555 LINGYCKISRMEDA--LVLF----REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
GI + L LS Y L C
Sbjct: 609 ------------------GITESGTQLELS--------------------TYNIILHGLC 630
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT------SQDFQSAFSLFRDMREAR 468
K + T EA ++ ++ + LQL+ ++ +I A + ++D +A S + + R
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 469 IYDL 472
Y L
Sbjct: 691 TYSL 694
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 148/341 (43%), Gaps = 9/341 (2%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ A ++ ++M G+ PNE + L + + +E+ + M + + + Y+
Sbjct: 142 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNV 201
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
LI G K G++E+A L G + D TY ++ GF + GN ++ + A
Sbjct: 202 LIDGLCKSGDVEAARAFFDEMLEAGC--KPDVY--TYNILISGFCKAGNTDAASHSL--A 255
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
Q+ +G +D I+ ++A ++++++ A GC+ + Y L CK
Sbjct: 256 QETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKM 315
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R EA L+ I +G DV Y +LI+ + A+ LF++M + Y
Sbjct: 316 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCY 375
Query: 477 LTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
++ L++ + P+ + + +V T +++I KAGR+ A R + M
Sbjct: 376 TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVT--LSTMIDGLSKAGRIGAAVRIFKSM 433
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
PN+ Y +LI+G A + L M ++K+ T
Sbjct: 434 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 474
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 106/508 (20%), Positives = 198/508 (38%), Gaps = 33/508 (6%)
Query: 73 TNLHKSLL-TNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVY 131
T L + LL T +A +K++T++ P +++I LS R F S+
Sbjct: 95 TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 154
Query: 132 VIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKN 191
+++ +H L + R + A A K + P + L+D K+
Sbjct: 155 RGLAPNEVVYSALIHGLCKA-RKMDCALEMLA----QMKKAFCTPDTITYNVLIDGLCKS 209
Query: 192 SNFVAFLKVFEECCRIALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVL 250
+ E R DE L+ KP++Y N + G C + + + + + ++
Sbjct: 210 GDV--------EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTIN 261
Query: 251 GVRPNESSF-GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G + ++ + +L K ++E + +E + G + + Y++L++G K+G LE
Sbjct: 262 GCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITAN-GCTPTIATYNALLNGLCKMGRLEE 320
Query: 310 ASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL----EPSGIV 365
A + + G TY ++ G G EA KL G+
Sbjct: 321 AIDLLRKIVDNGCTPDV----VTYTSLIDGL-------GKEKRSFEAYKLFKEMALRGLA 369
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+D +I + G +A S+ M + GC + + K R A ++
Sbjct: 370 LDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 429
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ + GL + Y ALI ++ A + M++A +Y ++ GL +
Sbjct: 430 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 489
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+ E AF DE++E + + +N +I FCKAG + A M + N
Sbjct: 490 SGDVEAARAFFDEMLE-AGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVV 548
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRK 573
TY +LI+G Q + + +K +
Sbjct: 549 TYGALISGLCKRRQLTKASLYFQHMKER 576
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 3/193 (1%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
++A ++++++ A GC+ + Y L CK R EA L+ I +G DV Y +L
Sbjct: 3 EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDP 503
I+ + A+ LF++M + Y ++ L++ + P+ + +
Sbjct: 63 IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+V T +++I KAGR+ A R + M PN+ Y +LI+G A +
Sbjct: 123 VPDVVT--LSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 564 LMMWHEIKRKIST 576
L M ++K+ T
Sbjct: 181 LEMLAQMKKAFCT 193
>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
Length = 526
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 156/361 (43%), Gaps = 41/361 (11%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNES 257
+VFEE L N++ P+I N G C GL V + +++ M+ G+ PN
Sbjct: 161 QVFEE----MLKANIE---PDIVTYNILASGFCKSGL--VMEVFDLLDRMADHGLEPNSL 211
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
++G + G + L +++ E G V YSS++ GY+ G + A +
Sbjct: 212 TYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRV 271
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGII 375
GN+ FS +++ + GNV+G +N+ I+ + P I + +I
Sbjct: 272 ARQGNLVDH-FSCS---KLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSK-----LI 322
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
S G DKAH +M G S+ + VY + YCK R EA QL + +++ G++
Sbjct: 323 SIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIK 382
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
DV Y L++ + Q + ++ R S+L L NH L +
Sbjct: 383 PDVIAYTVLLDGHLKETLQQGWEGIAKERR---------SFL-----LRANHNKLLSS-- 426
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++D ++E + +I CKA L +A+ M+ P+ Y +LINGY
Sbjct: 427 ----MKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYC 482
Query: 556 T 556
+
Sbjct: 483 S 483
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 127/337 (37%), Gaps = 62/337 (18%)
Query: 262 LAYLYALKGL--QEKIVELESLMN---EFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
+AY + GL + ++ E E L+ G + + YS LI Y K+GNL A
Sbjct: 1 MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60
Query: 317 CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGII 375
+ G ET C +V LQ G+ + +I K + SG+ +D+ +
Sbjct: 61 MVSHG--------IETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVI----- 107
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
Y + YCK EA +L+ ++ GL
Sbjct: 108 ------------------------------YNIAMDTYCKNGNMNEAVKLLNEMKCGGLT 137
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
D +Y LI + Q+A +F +M +A I +Y + +G ++ +
Sbjct: 138 PDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDL 197
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
LD + D +E + + I FC+ G L +A+ + + + Y S++ GY+
Sbjct: 198 LDRMA-DHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYL 256
Query: 556 TAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAF 592
+ M++ + R + NLVD F
Sbjct: 257 LSGWTDHAYMLFVRVAR------------QGNLVDHF 281
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 129/294 (43%), Gaps = 16/294 (5%)
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
Y G + V+L + M G + + Y+ LI+GY G +++A + M +
Sbjct: 115 YCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVF------EEMLK 168
Query: 326 SDFSKE--TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNL 381
++ + TY + GF ++G V + +L+ + LEP+ + + G I+ C
Sbjct: 169 ANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLEPNSL----TYGIAIVGFCRGG 224
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
LS+ A + + + G +Y + Y T A L + ++ G +D +
Sbjct: 225 NLSE-AEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSC 283
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
LI + Q A ++ + M E + SY +++ +N + + ++V+
Sbjct: 284 SKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQ 343
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+ + + +++ +CKAGRL++A + +M L +P+ Y L++G++
Sbjct: 344 RG-LSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHL 396
>gi|449461209|ref|XP_004148334.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Cucumis sativus]
Length = 1085
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 156/398 (39%), Gaps = 86/398 (21%)
Query: 210 DENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG-VRPNESSF----GFLAY 264
DEN+++ N + C++ + G C + A K E LG ++PN ++ G L
Sbjct: 177 DENVNYPFDN-FVCSSVISGFC-NIGKPELALKFFENAKTLGNLKPNLVTYTAVIGALCK 234
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL----------------- 307
L+ + + + + E+E F +VFYS I GY+ G L
Sbjct: 235 LHRVNQVSDLVCEMEKENLAF----DVVFYSCWICGYIAEGMLLDAFKRNREMVQKGIRP 290
Query: 308 ESASRTILL--CLGGGNMEQS------------DFSKETYCEVVKGFLQNGNVKGLANLI 353
++ S TIL+ GN+E++ + S TY ++ GF + G ++ +L
Sbjct: 291 DTISCTILIYGLSKLGNVEKAFGVLERMRKSGLELSSVTYTVIMLGFCKKGKLEEAFSLF 350
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ LE + VD + +I C G D+ +LDEM G + Y +
Sbjct: 351 EMVKGLE---MEVDEFMYATLIDGCCRKGDFDRVFGLLDEMETRGMKSSIVTYNTVINGL 407
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK RT+EA +L S GL DV Y L+ I Q+
Sbjct: 408 CKWGRTSEADRL-----SKGLHGDVITYSTLLHGYIQEQN-------------------- 442
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+TG+ E R +ED + + N +I A G EDA +
Sbjct: 443 ------ITGIFETKRR----------LEDAGISLDVIMCNVLIKALFMVGAYEDAYILYK 486
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
RM + N TY +LINGY + +++E K
Sbjct: 487 RMPEIGLAANSVTYHTLINGYCNICRIDEAFEIFNEFK 524
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
K KE R +A LVM ++ L DV +Y L+ A + + +
Sbjct: 707 FKRLVKEKRFFDAYNLVMKRGNNLLLGDVFDYSTLVHGLCKGGQMSEALDICVSAKTNGM 766
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
Y ++ GL R L+ AF L + +E + + ++I + C+ G LEDA
Sbjct: 767 KLNIICYNIVIKGLCLQSR--LIQAFQLFDSLERLGLIPTEITYGTLIDSLCREGYLEDA 824
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
++ RMI +PN Y SLI+GY+ Q + HE++
Sbjct: 825 RQLFERMIPKGLKPNTHIYNSLIDGYIRIGQIEEAFKLLHELR 867
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 20/240 (8%)
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGF 261
E I + + MK NI N ++G C LQS + A ++ +++ LG+ P E ++G
Sbjct: 753 EALDICVSAKTNGMKLNIICYNIVIKGLC--LQSRLIQAFQLFDSLERLGLIPTEITYGT 810
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L +G E +L M G Y+SLI GY+++G +E A + +L L G
Sbjct: 811 LIDSLCREGYLEDARQLFERMIPKGLKPNTHIYNSLIDGYIRIGQIEEAFK-LLHELRTG 869
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
+FS + +K + Q G+++G + E + GI D +I
Sbjct: 870 AFNPDEFSVSS---AIKAYCQKGDMEGALSFFFE---FKNEGISPDFLGFLYLIRGLCAK 923
Query: 382 GLSDKAHSILDE----------MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
G ++A IL E +N + L C+E R EA ++ ++ +
Sbjct: 924 GRMEEARDILRETIQSQSVMELINKVDTEIEAESIGSALTHLCEEGRILEAYTILNEVGT 983
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 148/397 (37%), Gaps = 102/397 (25%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
++P+ +C + YGL + + EK V+E M G+ + ++ + + KG
Sbjct: 288 IRPDTISCTILI----YGLSKLGNVEKAFGVLERMRKSGLELSSVTYTVIMLGFCKKGKL 343
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL--------ESASR----------TI 314
E+ L ++ Y++LI G + G+ E +R T+
Sbjct: 344 EEAFSLFEMVKGLEMEVDEFMYATLIDGCCRKGDFDRVFGLLDEMETRGMKSSIVTYNTV 403
Query: 315 L--LCLGGGNMEQSDFSKE------TYCEVVKGFLQNGNVKG------------------ 348
+ LC G E SK TY ++ G++Q N+ G
Sbjct: 404 INGLCKWGRTSEADRLSKGLHGDVITYSTLLHGYIQEQNITGIFETKRRLEDAGISLDVI 463
Query: 349 LANLIIEA--------------QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+ N++I+A +++ G+ + +I+ N+ D+A I +E
Sbjct: 464 MCNVLIKALFMVGAYEDAYILYKRMPEIGLAANSVTYHTLINGYCNICRIDEAFEIFNEF 523
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
C + VY +KA C+E R +A ++ ++++ + L LDVG LI
Sbjct: 524 KLASCD-SVAVYNSIIKALCREGRGEKAFEVFIELNLNVLTLDVGVCKMLIRT------- 575
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
I++ KG+ GL E A + E VE +V + N
Sbjct: 576 --------------IFEEKGA-----AGLCE-------ALYGMEKVEQ---DVYNNTCND 606
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
I CK G E A RM+ + +T+ LI
Sbjct: 607 AIRFLCKRGFSEMASEFYSRMMRTRLLLEKKTFYFLI 643
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 78/174 (44%), Gaps = 4/174 (2%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + CK + +EA + + ++G++L++ Y+ +I+ AF LF +
Sbjct: 738 YSTLVHGLCKGGQMSEALDICVSAKTNGMKLNIICYNIVIKGLCLQSRLIQAFQLFDSLE 797
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR-VEVKTHDWNSIIHAFCKAGR 524
+ + +Y T++ L E + ++ P+ ++ TH +NS+I + + G+
Sbjct: 798 RLGLIPTEITYGTLIDSLCREGYLEDARQLFERMI--PKGLKPNTHIYNSLIDGYIRIGQ 855
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK-ISTD 577
+E+A + L + F P++ + S I Y L + E K + IS D
Sbjct: 856 IEEAFKLLHELRTGAFNPDEFSVSSAIKAYCQKGDMEGALSFFFEFKNEGISPD 909
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 67/167 (40%), Gaps = 7/167 (4%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A + D + G Y + + C+E +A QL + GL+ + Y++LI
Sbjct: 788 QAFQLFDSLERLGLIPTEITYGTLIDSLCREGYLEDARQLFERMIPKGLKPNTHIYNSLI 847
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ I + AF L ++R + S + + + E +F E ++ +
Sbjct: 848 DGYIRIGQIEEAFKLLHELRTGAFNPDEFSVSSAIKAYCQKGDMEGALSFFFE-FKNEGI 906
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+ +I C GR+E+A+ LR I Q+ + LIN
Sbjct: 907 SPDFLGFLYLIRGLCAKGRMEEARDILRETI------QSQSVMELIN 947
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 164/387 (42%), Gaps = 39/387 (10%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ N L+G C + +V E M ++P+ ++G L + G +
Sbjct: 261 RPNLATYNVMLDGLC-KFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAA 319
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------------SRTILLCLGG-- 320
+ S + + G Y+SL+ G+ + G ++ A RT + + G
Sbjct: 320 RVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLF 379
Query: 321 --GNMEQSD-----FSKETYC--------EVVKGFLQNGNVKGLANLIIEAQKLEPSGIV 365
G ++++ K+ C ++ G QNG + EA+ SG
Sbjct: 380 DSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARV---SGKQ 436
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+D +I+ N+G A + ++M+ GC +Y + +C+ +RT++A ++
Sbjct: 437 LDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRI 496
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
++ +G V Y+ LI+ ++ +Q A S+ R+M E +Y +++ GL
Sbjct: 497 YSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFS 556
Query: 486 NHRPELMAAFLDEVV-EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ-FEPN 543
+ + + + +++ + +V+V H N +IH C AG++++A M + PN
Sbjct: 557 DKKIDDALSIWKQILYKGLKVDVMMH--NILIHGLCSAGKVDEALHVFSDMKEKKNCPPN 614
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEI 570
TY +L++G +W I
Sbjct: 615 LVTYNTLMDGLYETGYIDKAATLWTSI 641
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 167/425 (39%), Gaps = 41/425 (9%)
Query: 209 LDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVL----GVRPNE 256
LD LD + +P++ NA L GC + EKV+ L G RPN
Sbjct: 209 LDHALDLLDEMPRSGVQPDVVCYNALLGGCF----KAGEFEKVMRVWDKLVKDPGARPNL 264
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
+++ + G +++ E+ M ++ Y LI G + G+++ A+R
Sbjct: 265 ATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSE 324
Query: 317 CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS----GIVVDRSVGF 372
+ G + Y +VKGF Q G V+ EA K S G+ R+
Sbjct: 325 IIKTGLV----IDAAMYNSLVKGFCQAGRVQ-------EAWKFWDSAGFAGLRNLRTYNI 373
Query: 373 GIISACVNLGLSDKAHSILDEMNA-CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
+I + G+ D+A + D + C + + C+ +A + +
Sbjct: 374 -MIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARV 432
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
SG QLDV +Y ++I A ++ M + Y +++G + +R
Sbjct: 433 SGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTS- 491
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
A + + D +N++I CKA + ++A R M+ F P+ TY SLI
Sbjct: 492 DAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLI 551
Query: 552 NGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
G + ++ L +W +I KG+K + + + ++ L G D + V
Sbjct: 552 RGLFSDKKIDDALSIWKQIL-------YKGLKVDVMMHNILIHGLCSAGKVDEALHVFSD 604
Query: 612 SQEMK 616
+E K
Sbjct: 605 MKEKK 609
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 92/242 (38%), Gaps = 52/242 (21%)
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG----LQLDVGNYDALIEASITSQD 453
GC+ G+ + L A+ + R ++A +S + ++ Y+ ++ + D
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE--------------- 498
A +LF +R ++ +Y T+M GL + R + LDE
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233
Query: 499 --------------------VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+V+DP +N ++ CK GR ++ RM+
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY-ALV 597
+P+ TY LI+G + ++ EI + G+ ++DA +Y +LV
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK-------TGL-----VIDAAMYNSLV 341
Query: 598 KG 599
KG
Sbjct: 342 KG 343
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 108/269 (40%), Gaps = 28/269 (10%)
Query: 194 FVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR 253
V +KV+E+ +D+ D KPN + NA + G C + SDA ++ M+ G
Sbjct: 455 LVDAVKVYEK-----MDK--DGCKPNSHIYNALISGFCQ-VYRTSDAVRIYSKMADNGCS 506
Query: 254 PNESSFGFLAYLYALKGL--QEKIVELESL---MNEFGFSSQMVFYSSLISGYVKLGNLE 308
P ++ L + GL EK E S+ M E GF+ + Y SLI G ++
Sbjct: 507 PTVITYNTL-----IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561
Query: 309 SASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVV 366
A L G + D ++ G G V ++ ++ +K P +V
Sbjct: 562 DALSIWKQILYKG--LKVDVMMHNI--LIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVT 617
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
++ G+ G DKA ++ + G + Y +K C R E QL+
Sbjct: 618 YNTLMDGLYET----GYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLL 673
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQ 455
++ S G+ V ++ L+ A I Q
Sbjct: 674 DEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 157/397 (39%), Gaps = 56/397 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG------- 270
P++ + G C L + +A K+++ M GV PN + + + L KG
Sbjct: 289 PDVVTYGILIHGHC-ALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALR 347
Query: 271 -----LQEKIVELESL-----------------------MNEFGFSSQMVFYSSLISGYV 302
+Q K++ E+L M G ++ V Y+++I+G
Sbjct: 348 VVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLC 407
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
+ LE A + + + D + TY ++ G+ + G + A+ +
Sbjct: 408 RAVELEEAEKLLQEMWA----RRLDVDEVTYTVLIDGYCKRGKM---------AEAFQMH 454
Query: 363 GIVVDRSVGFGIIS-ACVNLGLSDK-----AHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+V R V +++ + GL + A+ +L EM+ G + Y + CK
Sbjct: 455 NAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKA 514
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+A + + D+ ++ L+ DV Y LI+A S D A SL ++M + I +Y
Sbjct: 515 GYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTY 574
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+M G + R E LD ++E + +NS++ +C ++ + M
Sbjct: 575 NVLMNGFCMSGRVEGGKKLLDWMLEK-NIHPNAATYNSLMKQYCIENNMKSTTEIYKGMR 633
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
PN+ TY LI G+ A L E+ +K
Sbjct: 634 SRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQK 670
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 101/264 (38%), Gaps = 18/264 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ A +G C V A +++ MS G+ N ++ L G E+
Sbjct: 462 VTPNVVTYTALTDGLCKQ-GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQA 520
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ + M+ + Y++LI K G+L+ A + L G + TY
Sbjct: 521 MRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKP----TIVTYNV 576
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ GF +G V+G L+ + + + P+ + + C+ + I
Sbjct: 577 LMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMK----QYCIENNMKSTT-EIYKG 631
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + Y +K +CK EA ++ G +L +Y ALI +
Sbjct: 632 MRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKK 691
Query: 454 FQSAFSLFRDMR------EARIYD 471
F A LF DMR E+ +YD
Sbjct: 692 FVEARELFHDMRKEGLTAESDVYD 715
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 147/343 (42%), Gaps = 25/343 (7%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN 283
NA + C + A++ + M G RP+ +F L Y E +L M
Sbjct: 133 NALIRALCRR-ADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMP 191
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN 343
GFS V Y++LI G+ + G ++ A M Q D T+ +VKG
Sbjct: 192 FRGFSQDAVSYAALIEGFCEAGRIDEALELF------REMTQPDMY--THAALVKGLCDA 243
Query: 344 G-NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG---C 399
G +GL L QK++ G ++ +++A IL+EM G C
Sbjct: 244 GRGEEGLCML----QKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPC 299
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
V + V AYC+E R + A ++ + G + +V Y+A+++ + A +
Sbjct: 300 VVTCTIVV---NAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMA 356
Query: 460 LFRDMREARIYDLKGSYLTIMTG-LMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIH 517
L MRE + +Y ++ G ++ H + +AF L ++E + + +N +I
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGH---IGSAFRLLRLMEGNGLAADQYTYNVLID 413
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
A CK G++++A + + PN T+ ++ING A ++
Sbjct: 414 ALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKF 456
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 96/489 (19%), Positives = 181/489 (37%), Gaps = 71/489 (14%)
Query: 175 MPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMK----PNIYACNAALEGC 230
MPF GF D ++ A ++ F E RI DE L+ + P++Y A ++G
Sbjct: 190 MPFR---GFSQDAV----SYAALIEGFCEAGRI--DEALELFREMTQPDMYTHAALVKGL 240
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GF 287
C + + +++ M LG RP ++ L L+ ++K E E ++NE G
Sbjct: 241 CDAGRG-EEGLCMLQKMKELGWRPTTRAYAALVDLWCR---EQKAEEAEKILNEMFDSGL 296
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK 347
+V + +++ Y + G + A R + + + TY +V+GF G V
Sbjct: 297 MPCVVTCTIVVNAYCREGRMSGAVRV----FESMRFKGCEPNVWTYNAIVQGFCNAGKVY 352
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
KA ++LD+M CG + Y
Sbjct: 353 --------------------------------------KAMALLDQMRECGVEPDVVTYN 374
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
++ C + A +L+ + +GL D Y+ LI+A + A SLF +
Sbjct: 375 LLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYR 434
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
I ++ T++ GL + + ++ FL+ ++ T+ ++ I CK ++
Sbjct: 435 GIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAP-DTYTYSPFIENLCKTKGSQE 493
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN 587
+ M+ +P+ Y +IN Y +W ++ +G +
Sbjct: 494 GLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMV-------SQGCSPDVV 546
Query: 588 LVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKK 647
+ A G D VV + ++ + VD Y ++ H + K
Sbjct: 547 TYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAY-NTLIDGHTSIGQTDRAVTILKH 605
Query: 648 MEALIAFKN 656
M + + N
Sbjct: 606 MTGVASMPN 614
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 132/334 (39%), Gaps = 13/334 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P + C + C +S A +V E+M G PN ++ + + G K
Sbjct: 296 LMPCVVTCTIVVNAYCRE-GRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKA 354
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L M E G +V Y+ LI G G++ SA R LL L GN +D + TY
Sbjct: 355 MALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFR--LLRLMEGNGLAAD--QYTYNV 410
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ + G V +L +E + + P+ + + +I+ G D A + L+
Sbjct: 411 LIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNT-----VINGLCKAGKFDVACTFLEN 465
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + G + Y P ++ CK + E + ++ ++ NY +I ++
Sbjct: 466 MISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERN 525
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A ++ M +Y T + R + + E ++ R V +N
Sbjct: 526 YGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTE-MKKCRTIVDAMAYN 584
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
++I G+ + A L+ M + PN T+
Sbjct: 585 TLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTF 618
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 154/394 (39%), Gaps = 58/394 (14%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN++ NA ++G C V A +++ M GV P+ ++ L + G
Sbjct: 332 EPNVWTYNAIVQGFC-NAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAF 390
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS------------------RTIL--L 316
L LM G ++ Y+ LI K G ++ A T++ L
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Query: 317 CLGGG---------NMEQSDFSKETYCEVVKGFLQN-----GNVKGLANLIIEAQK-LEP 361
C G NM + ++ +TY F++N G+ +GL + QK ++P
Sbjct: 451 CKAGKFDVACTFLENMISAGYAPDTY--TYSPFIENLCKTKGSQEGLFFIDEMLQKDVKP 508
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
S V+ ++ + N GL+ + I +M + GCS + Y +++AYC E R E
Sbjct: 509 S--TVNYTIVINRLFNERNYGLATR---IWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDE 563
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL---- 477
A +V ++ +D Y+ LI+ + A ++ + M ++
Sbjct: 564 AENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLR 623
Query: 478 TIMTGLMENHRP----------ELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
++ + H P EL F L E+++ V + SI+ F + RL+
Sbjct: 624 HLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLD 683
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+ + M N+ Y +L+N + Y
Sbjct: 684 EVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMY 717
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 161/392 (41%), Gaps = 59/392 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE--KI 275
PN+ N + G V D K+ E M + NE Y + GL + +
Sbjct: 253 PNVKTHNIMISGLS-KCGRVDDCLKIWERM-----KQNEREKDLYTYSSLIHGLCDAGNV 306
Query: 276 VELESLMNEFG---FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD-FSKE 331
+ ES+ NE S +V Y++++ G+ + G ++ + + ME + +
Sbjct: 307 DKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRI------MEHKNSVNIV 360
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPS-GIVVDRSV-GFGIISACVNLGLSDKAHS 389
+Y ++KG L+NG + A +I +L P+ G D++ G I CVN G +KA
Sbjct: 361 SYNILIKGLLENGKIDE-ATMI---WRLMPAKGYAADKTTYGIFIHGLCVN-GYVNKALG 415
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
++ E+ + G + + Y + CK+ R EA+ LV ++S G++L+ +ALI I
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-------- 501
A R+M + SY ++ GL + + +AF+ E++E
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 502 -----------DPRVEVKTHDW---------------NSIIHAFCKAGRLEDAKRTLRRM 535
D ++++ W N +IH C G+L+DA + M
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
N TY +L+ G+ ++W
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 154/391 (39%), Gaps = 55/391 (14%)
Query: 210 DENLDFMKP--NIYACNAALEGCCYGLQSVSDAEKVIETMSVL------GVRPNESSFGF 261
D+ LD K I+ C A+ L + +A++ ++ S+ GV PN ++
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L + K EK M + GF + YS++I+ K G L+ A
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELF------D 208
Query: 322 NMEQSDFSKETYCE--VVKGFLQNGNVKG---LANLIIEAQKLEPS----GIVVDRSVGF 372
M + + + C ++ GFL+ + K L + ++E + P+ I++
Sbjct: 209 EMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKC 268
Query: 373 GIISACVNL--------------------------GLSDKAHSILDEMNACGCSVGLGVY 406
G + C+ + G DKA S+ +E++ S+ + Y
Sbjct: 269 GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTY 328
Query: 407 VPTLKAYCKEHRTAEATQL--VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
L +C+ + E+ +L +M+ +S +++ +Y+ LI+ + + A ++R M
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIMEHKNS---VNIVSYNILIKGLLENGKIDEATMIWRLM 385
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
K +Y + GL N + E VE + + + SII CK R
Sbjct: 386 PAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE-VESSGGHLDVYAYASIIDCLCKKKR 444
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
LE+A ++ M E N +LI G +
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 5/195 (2%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
K S+ G + L Y +K CK+ +A + + G + DV +Y +I
Sbjct: 132 KVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVI 191
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ A LF +M E + Y ++ G ++ + D ++ED V
Sbjct: 192 NDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV 251
Query: 506 --EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
VKTH N +I K GR++D + RM + E + TY SLI+G A
Sbjct: 252 YPNVKTH--NIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
Query: 564 LMMWHEI-KRKISTD 577
+++E+ +RK S D
Sbjct: 310 ESVFNELDERKASID 324
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 143/357 (40%), Gaps = 48/357 (13%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++Y ++G C V +A ++ + M G PN + L Y LKG + EL
Sbjct: 254 SVYVFTVLIDGLCKNGMLV-EAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMAREL 312
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI-LLCLGGGNMEQSDFSKETYCEVV 337
+ E+GF + Y+ I GY K+G + A R +C E + TY ++
Sbjct: 313 FDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMC-----REGVVPNIVTYNSLI 367
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+ G V G ++ + + SG+ D I++ C+
Sbjct: 368 DCLCKAGEVSGAWEIV---KTMHRSGLTPD------IVTCCI------------------ 400
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
L CK R +A L + SGL DV +Y LI TS+ A
Sbjct: 401 -----------LLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEA 449
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKTHDWNSII 516
+L RDM + +Y ++ GL + R L+E+ V+ P + T ++ ++
Sbjct: 450 MNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTIT--YSILL 507
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
A K L++A +MI EP+ Y +I+GY +E+ + ++ E+ K
Sbjct: 508 DALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMK 564
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 124/351 (35%), Gaps = 42/351 (11%)
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
K +E + GFS V Y LI+G + G + A +L + ++ D
Sbjct: 125 KALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAV-NLLRMIEKEKEKEKD------ 177
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
GF GNV + IV+D C N G D+ +E
Sbjct: 178 -----GFFVKGNVVMYS-------------IVID--------CLCRN-GFVDEGFEFYNE 210
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G Y ++ C + E LV ++ GL + V + LI+ +
Sbjct: 211 MMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGM 270
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A +F +M R Y+ T + G MA L + + + + +N
Sbjct: 271 LVEAREMFDEMVN-RGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYN 329
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
IH +CK GR+ DA R M PN TY SLI+ A + V W +K
Sbjct: 330 VFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGE---VSGAWEIVK-- 384
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
T + G+ + L L K D + + + E + D W Y
Sbjct: 385 --TMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSY 433
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 102/257 (39%), Gaps = 21/257 (8%)
Query: 198 LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN-E 256
++VF+E CR + + PNI N+ ++ C VS A ++++TM G+ P+
Sbjct: 345 VRVFDEMCR-------EGVVPNIVTYNSLIDCLCKA-GEVSGAWEIVKTMHRSGLTPDIV 396
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
+ L L K L + I+ L+ E G + + Y+ LI G + A +
Sbjct: 397 TCCILLDGLCKSKRLDQAILLFNQLV-ESGLTPDVWSYTILIHGCCTSRRMGEAMNLL-- 453
Query: 317 CLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
+M + TY ++ G ++G + L+ E P + S+ +
Sbjct: 454 ----RDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSI---L 506
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
+ A D+A + ++M G + Y + YCK R EA L ++ L
Sbjct: 507 LDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNL 566
Query: 435 QLDVGNYDALIEASITS 451
D+ Y L A S
Sbjct: 567 VPDIVTYTILFNAVFKS 583
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 156/407 (38%), Gaps = 65/407 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++ N+Y N + C Q + + + + M GV P+ ++ L Y +GL E+
Sbjct: 93 VQVNVYTLNIMINALCKN-QKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 151
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNL-----------------ESASRTILL-- 316
EL M+ G + Y+++I+G K G ++A+ ILL
Sbjct: 152 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 211
Query: 317 CLGGGNMEQSD--FSKETYCEVVKGFLQNGNVKGLAN---LIIEAQK----LEPSGIVVD 367
C NM ++ F + VV + + GL + + +A K ++ +G+ D
Sbjct: 212 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 271
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+ +I G+ +A + DEM GC + + Y L CKE +EA +L
Sbjct: 272 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFT 331
Query: 428 DISSSG-----------------------------------LQLDVGNYDALIEASITSQ 452
+++ G L+ DV Y+ LI+
Sbjct: 332 EMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGS 391
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ + L+ DM RIY SY ++ G DE+VE E
Sbjct: 392 EMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG-FEATIITC 450
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
N+I+ +C+AG A L M+ P+ TY +LING++ E
Sbjct: 451 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 497
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 109/536 (20%), Positives = 200/536 (37%), Gaps = 112/536 (20%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQ 143
D AW+ ++ + + + + N +I L Q N K + +E+ D
Sbjct: 78 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSD----MEEKGVFPDVV 133
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T +TL+ + AF L+ M + P +++ K ++ V +E
Sbjct: 134 TYNTLINAYCRQGLLEEAFELMDSM-SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 192
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
+I M P+ N L CC ++ DAE++ + M GV P+ SF L
Sbjct: 193 MLKIG-------MSPDTATYNILLVECCRN-DNMMDAERIFDEMPSQGVVPDLVSFSALI 244
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR----------- 312
L + G ++ ++ M G + V Y+ LI G+ + G + A +
Sbjct: 245 GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCV 304
Query: 313 -------TIL--LCLGGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANL 352
TIL LC E + E T+ ++ G+ ++GN+ L
Sbjct: 305 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTL 364
Query: 353 --IIEAQKLEPSGI-----------------------------VVDRSVGFGI-ISACVN 380
++ + L+P + + + +GI I+ N
Sbjct: 365 FEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCN 424
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
+G +A + DEM G + +K YC+ +A + + ++ G+ D
Sbjct: 425 MGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGIT 484
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y+ LI I ++ AF+L M + GL+ P+++
Sbjct: 485 YNTLINGFIKEENMDRAFALVNKMENS--------------GLL----PDVIT------- 519
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+N I++ F + GR+++A+ + +MI P+ TY SLING+VT
Sbjct: 520 -----------YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVT 564
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 155/372 (41%), Gaps = 30/372 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M PN+Y N ++G C + V A ++ + M G+ PN +FG L + L E +
Sbjct: 259 MLPNLYTYNTMMDGYC-KIAHVKKALELYQEMLGDGLLPNVVTFGIL--IDGLCKTDEMV 315
Query: 276 VELESL--MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-- 331
+ L M FG + Y+ LI GY K GNL A +E+ + +
Sbjct: 316 SARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL------HSEIEKHEILPDVF 369
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
TY ++KG ++ L+ Q+++ G + + +I G +KA +
Sbjct: 370 TYSILIKGLCGVDRMEEADGLL---QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+M G + + + YCK + A L ++ GL DV Y ALI+
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTH 510
+ + AF L ++M+EA ++ + ++ GL ++ R + + FL + D KT+
Sbjct: 487 GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDT-TGSKTN 545
Query: 511 D------------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+ + ++I C GR+ A + M P+ T + +I G+ A
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAM 605
Query: 559 QYFSVLMMWHEI 570
V+M+ +I
Sbjct: 606 HLRDVMMLQADI 617
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 15/279 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ + ++G C G+ + +A+ +++ M G PN ++ L Y +G EK +E
Sbjct: 366 PDVFTYSILIKGLC-GVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ S M E G ++ +S+LI GY K G +E+A + G + Y ++
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV----VAYTALI 480
Query: 338 KGFLQNGNVKGLANLIIEAQK--LEPS----GIVVDRSVGFGIISACVNLGL----SDKA 387
G ++GN K L E Q+ L P+ ++D G IS + L L +D
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTT 540
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
S +E++ CS +Y ++ C + R +A++ D+ SGL+ DV +I+
Sbjct: 541 GSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQG 600
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ + L D+ + I Y + G E+
Sbjct: 601 HFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEES 639
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 98/261 (37%), Gaps = 25/261 (9%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++ V G D + +M A G S + Y + C++ +A +L ++
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ V Y LI A S+FR MR + + +Y T+M G + +
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283
Query: 494 AFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
E++ D P V + +I CK + A++ L M PN Y L
Sbjct: 284 ELYQEMLGDGLLPNVVT----FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCL 339
Query: 551 INGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
I+GY A L + EI++ L D F Y+++ G V+
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEK------------HEILPDVFTYSILIKGLCG-----VD 382
Query: 611 KSQEMKVFVDKWKYKQAFMEN 631
+ +E + + K K+ F+ N
Sbjct: 383 RMEEADGLLQEMK-KKGFLPN 402
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 17/288 (5%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+++ G+ DR +++AC +G + A ++ DEM G + Y + A CK
Sbjct: 41 RQMLKDGLCPDRKTFNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKC 100
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
A Q+++D+ + G++ +V Y LI+ + ++ A L M+ RI + Y
Sbjct: 101 GNMELAMQVLLDMEAKGVKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCY 160
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
T++ ++ + +A DE +E+ +E T +NS+I+ + K GRL+ ++ M
Sbjct: 161 NTLLAIYVKAGKYAEIANVCDE-MEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMR 219
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYAL 596
P+ TY +LI+ Y A + ++ + K + G+K + L +F+ L
Sbjct: 220 KRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFK-------ESGLKPDVVLFSSFIDTL 272
Query: 597 VKGGFFDAVMQVVEKSQEMKV---------FVDKWKYKQAFMENHKKL 635
K G + + ++ EM + +D + + ME+ ++
Sbjct: 273 AKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGKSKVMMEDDSEV 320
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 124/309 (40%), Gaps = 12/309 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P + NA ++ C G + M G+ P+ +F L + G E
Sbjct: 12 LRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAACSRVGHLEDA 71
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ M G + Y++ I K GN+E A + +L +ME TY
Sbjct: 72 RAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLL------DMEAKGVKPNVVTY 125
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G+ ++ + +K++ I +DR +++ V G + ++ DE
Sbjct: 126 STLIDGY---SKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDE 182
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G Y + Y K+ R + LV D+ G+ V Y LI+ +
Sbjct: 183 MEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGM 242
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
AF+++ D +E+ + + + + L +N E + L+++ E ++ +N
Sbjct: 243 HGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTE-MGIKPNVVTYN 301
Query: 514 SIIHAFCKA 522
+II AF K+
Sbjct: 302 AIIDAFGKS 310
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 12/236 (5%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
E ++ LD +KPN+ + ++G L+ +A K+ E M + ++ + +
Sbjct: 103 MELAMQVLLDMEAKGVKPNVVTYSTLIDGYSK-LEKYEEALKLCEKMKSMRIQLDRVCYN 161
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L +Y G +I + M E G V Y+SLI+GY K G L+ S +
Sbjct: 162 TLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILV------ 215
Query: 321 GNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
+M + + TY ++ + + G N+ ++ + SG+ D + I
Sbjct: 216 QDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLD---FKESGLKPDVVLFSSFIDTL 272
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
GL + A S+L++M G + Y + A+ K E V D+ G+
Sbjct: 273 AKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGKSKVMMEDDSEVGDMGIVGV 328
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 148/388 (38%), Gaps = 56/388 (14%)
Query: 210 DENL-DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL 268
DE L D + N+ A + + G C VS A + + M G PN +F L +
Sbjct: 328 DEMLSDGISMNVVAATSLITGHCKNNDLVS-ALVLFDKMEKEGPSPNSVTFSVLIEWFRK 386
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
G EK +E M G + + ++I G++K E A + D
Sbjct: 387 NGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLF------------DE 434
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
S ET GLAN+ V I+S G +D+A
Sbjct: 435 SFET---------------GLANVF----------------VCNTILSWLCKQGKTDEAT 463
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+L +M + G + Y + +C++ A + +I GL+ + Y LI+
Sbjct: 464 ELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC 523
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ D Q+A + M + I Y TI+ GL + + L ++E+ R+ V
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+NSII F K G ++ A M PN TY SL+NG + L M
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 569 EIKRKISTDGQKGIKFE----HNLVDAF 592
E+K KG+K + L+D F
Sbjct: 644 EMK-------NKGVKLDIPAYGALIDGF 664
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 165/379 (43%), Gaps = 25/379 (6%)
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
EE ++ DE+ + N++ CN L C ++ +A +++ M G+ PN S+
Sbjct: 426 EEALKL-FDESFETGLANVFVCNTILSWLCKQGKT-DEATELLSKMESRGIGPNVVSYNN 483
Query: 262 LAYLYALKGLQEKIVELESL----MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
+ L ++K ++L + + E G YS LI G + + E + ++
Sbjct: 484 VM----LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFR-NHDEQNALEVVNH 538
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
+ N+E + Y ++ G + G L+ A +E + V II
Sbjct: 539 MTSSNIEVNGV---VYQTIINGLCKVGQTSKARELL--ANMIEEKRLCVSCMSYNSIIDG 593
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
G D A + +EM G S + Y + CK +R +A ++ ++ + G++LD
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
+ Y ALI+ + +SA +LF ++ E + + Y ++++G M A LD
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN---MVAALD 710
Query: 498 ---EVVEDP-RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
++++D R ++ T + ++I K G L A M + P++ Y ++NG
Sbjct: 711 LYKKMLKDGLRCDLGT--YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNG 768
Query: 554 YVTAEQYFSVLMMWHEIKR 572
Q+ V+ M+ E+K+
Sbjct: 769 LSKKGQFVKVVKMFEEMKK 787
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 140/342 (40%), Gaps = 16/342 (4%)
Query: 119 NHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFE 178
NH+ + A V ++ N ++ + T++ + + A L+ M + +
Sbjct: 526 NHDEQNALEVVNHMTSSNIEV-NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC 584
Query: 179 LWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVS 238
+ ++D K + + +EE C + + PN+ + + G C +
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCG-------NGISPNVITYTSLMNGLCKN-NRMD 636
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
A ++ + M GV+ + ++G L + + E L S + E G + Y+SLI
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
SG+ LGN+ +A L G + D TY ++ G L++GN+ + L E Q
Sbjct: 697 SGFRNLGNMVAALDLYKKMLKDG--LRCDLG--TYTTLIDGLLKDGNLILASELYTEMQA 752
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+ G+V D + I++ G K + +EM + + +Y + + +E
Sbjct: 753 V---GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 809
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
EA +L ++ G+ D +D L+ + + A SL
Sbjct: 810 LDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 147/358 (41%), Gaps = 15/358 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP A NA L+G + S+ +AE+V++ MS GV P+E+++ L Y G E
Sbjct: 288 IKPRTRAYNALLKGYV-KIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 346
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L M G +S +++G+ G + A + G F Y
Sbjct: 347 RILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHF----YNV 402
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ F G L + + ++ GI D +I A G D+A + DEM
Sbjct: 403 MIDTF---GKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMR 459
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
C +G Y + +E R ++ ++ GL ++ Y L++ S F+
Sbjct: 460 ESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFK 519
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR---VEVKTHDW 512
A D EA D T+ L+ + +A VV+ R +E T
Sbjct: 520 EAV----DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVL 575
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
NS+I+AF + R+ +A L+ M P+ TY +L+ + EQ+ V +++ E+
Sbjct: 576 NSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEM 633
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 4/214 (1%)
Query: 362 SGIVVDRSVGF-GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
+G + R+ + ++ V +G A +LDEM+ CG + Y + AY + R
Sbjct: 285 AGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWE 344
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY-LTI 479
A L+ ++ + G++ + ++ ++Q AF++ R+M + + + Y + I
Sbjct: 345 SARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMI 404
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
T N M AF D + E+ +E WN++I A CK GR + A M
Sbjct: 405 DTFGKYNCLGHAMDAF-DRMREE-GIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN 462
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
TY +IN +++ V M E+K +
Sbjct: 463 CPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQ 496
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 158/433 (36%), Gaps = 53/433 (12%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
D A + S A L P +LI+ L S + + F E P+ +
Sbjct: 238 DAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNA 297
Query: 145 V---HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
+ + +GS++NA + +C P E LVD + +
Sbjct: 298 LLKGYVKIGSLKNAEQVLDEMS--QCGVA-----PDEATYSLLVDAYTRAGRW------- 343
Query: 202 EECCRIALDE-NLDFMKPNIYACNAALEGCCYGLQSVSDAEK---VIETMSVLGVRPNES 257
E RI L E D +KP+ Y + L G + + +K V+ M GVRP+
Sbjct: 344 -ESARILLKEMEADGVKPSSYVFSRILAG----FRDRGEWQKAFAVLREMHASGVRPDRH 398
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
+ + + ++ M E G +V +++LI + K G + A
Sbjct: 399 FYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRA------- 451
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE----------PSGIVVD 367
+E D +E+ C L + NL+ E Q+ E G+V +
Sbjct: 452 -----IELFDEMRESNCP-----LGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPN 501
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
++ G +A ++ M A G +Y + AY + A +V
Sbjct: 502 IITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVK 561
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ + GL+ ++LI A + AFS+ + M+E + +Y T+M L+
Sbjct: 562 AMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVE 621
Query: 488 RPELMAAFLDEVV 500
+ E + +E++
Sbjct: 622 QFEKVPVIYEEMI 634
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 99/491 (20%), Positives = 195/491 (39%), Gaps = 31/491 (6%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
++ S T ++ ++D+A+ ++ + + P NS+IA L Q
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
++V KN + D T +++L ++ A +K M ++ P + L+D
Sbjct: 255 NTMV----KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMD 309
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDAEKVIE 245
KN + K+F+ + L KP I L+G Y + ++ + +++
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGL-------KPEITTYGTLLQG--YATKGALVEMHGLLD 360
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M G+ P+ F L YA +G ++ + + S M + G + V Y ++I K G
Sbjct: 361 LMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Query: 306 NLESA----SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
+E A + I L GN+ Y ++ G + LI+E +
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNI--------VYNSLIHGLCTCNKWERAEELILE---MLD 469
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
GI ++ II + G ++ + + M G + Y + YC + E
Sbjct: 470 RGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDE 529
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A +L+ + S GL+ + Y LI + A LF++M + + +Y I+
Sbjct: 530 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
GL + R + E +++ +N I+H CK +DA + + + + +
Sbjct: 590 GLFQTRRTAAAKELYVRITESG-TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Query: 542 PNDQTYLSLIN 552
+T+ +I+
Sbjct: 649 LEARTFNIMID 659
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 158/364 (43%), Gaps = 29/364 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N+ + C Q++ A +V+ TM GV P+ ++ + + Y G ++ +
Sbjct: 229 PDVVTYNSIIAALCKA-QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 287
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
M G +V YS L+ K G A + +M + E TY
Sbjct: 288 FLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF------DSMTKRGLKPEITTYGT 341
Query: 336 VVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+++G+ G + GL +L++ +GI D V +I A G D+A +
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVR------NGIHPDHYVFSILICAYAKQGKVDQAMLVFS 395
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M G + Y + CK R +A + GL Y++LI T
Sbjct: 396 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 455
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIM--TGLMENHRPELMAAFLDEVVE-DPRVEVKT 509
++ A L +M + +G L + ++++H E +++ E R+ VK
Sbjct: 456 KWERAEELILEMLD------RGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 510 H--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+ +N++I+ +C AG++++A + L M+ + +PN TY +LINGY + L+++
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569
Query: 568 HEIK 571
E++
Sbjct: 570 KEME 573
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 101/534 (18%), Positives = 202/534 (37%), Gaps = 70/534 (13%)
Query: 82 NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLD 141
N + EA + + + S P S ++ + +A+++ ++++ L D
Sbjct: 172 NRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGI-LPD 230
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNS--NFVAFLK 199
T ++++ ++ A A ++ M KN + L C + FLK
Sbjct: 231 VVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK 290
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
D ++P++ + ++ C + + +A K+ ++M+ G++P +++
Sbjct: 291 KMRS----------DGVEPDVVTYSLLMDYLCKNGRCM-EARKIFDSMTKRGLKPEITTY 339
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
G L YA KG ++ L LM G +S LI Y K G ++ A +L
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA----MLVFS 395
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA---QKLEPSGIVVDRSVGFGIIS 376
+ + + TY V+ ++G V+ A L E + L P IV + +I
Sbjct: 396 KMRQQGLNPNAVTYGAVIGILCKSGRVED-AMLYFEQMIDEGLSPGNIVYN-----SLIH 449
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
++A ++ EM G + + + ++CKE R E+ +L + G++
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
+V Y+ LI + A L M + GL N
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGM--------------VSVGLKPN---------- 545
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
T ++++I+ +CK R+EDA + M P+ TY ++ G
Sbjct: 546 ------------TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Query: 557 AEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
+ + ++ I + G + E + + L+ L K D +Q+ +
Sbjct: 594 TRRTAAAKELYVRIT-------ESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 640
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 32/268 (11%)
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV---MDISSSGL 434
C + SD +L M GC + Y LK C E+R+ EA +L+ D G
Sbjct: 133 CADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGS 192
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
DV +Y +I D A+S + +M + I +Y +I+ L + +
Sbjct: 193 PPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAME 252
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI--- 551
L+ +V++ V +NSI+H +C +G+ ++A L++M EP+ TY L+
Sbjct: 253 VLNTMVKNG-VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 552 --NGYVTAEQYFSVLMMWHEIKRKISTDG-----------------------QKGIKFEH 586
NG + M +K +I+T G + GI +H
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371
Query: 587 NLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+ + A K G D M V K ++
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQ 399
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 144/354 (40%), Gaps = 45/354 (12%)
Query: 227 LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL------QEKIVELES 280
L+G C ++ + V+ M+ LG PN S+ L LKGL QE + L
Sbjct: 129 LKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNIL-----LKGLCDENRSQEALELLHM 183
Query: 281 LMNEFGFSS--QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV- 337
+ ++ G S +V Y+++I+G+ K G+ SD + TY E++
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGD-------------------SDKAYSTYHEMLD 224
Query: 338 KGFLQN-GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL----------GLSDK 386
+G L + + + +AQ ++ + V++ V G++ C+ G +
Sbjct: 225 RGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 284
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A L +M + G + Y + CK R EA ++ ++ GL+ ++ Y L++
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQ 344
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
T L M I+ + ++ + + + A + + +
Sbjct: 345 GYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD-QAMLVFSKMRQQGLN 403
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+ ++I CK+GR+EDA +MI P + Y SLI+G T ++
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 11/232 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V ++EK+ E M +GV+PN ++ L Y L G ++ ++L S M G V YS+
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
LI+GY K+ +E A +L ME S S + TY +++G Q L +
Sbjct: 552 LINGYCKISRMEDA--LVLF----KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 605
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
++ SG ++ S I+ L+D A + + + + + A
Sbjct: 606 ---RITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
K R EA L + SS+GL + Y + E I + LF M +
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 146/354 (41%), Gaps = 21/354 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ C ++G C +S A ++ M LG PN + L G + +E
Sbjct: 405 PDVVTCTTLVKGLCMK-HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALE 463
Query: 278 LESLM----NEFGFSSQ--MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
L M + +G + + + YS +I G K G E +R + + + S
Sbjct: 464 LHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGR-EDEARELFKEMKALGVIPDVIS-- 520
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
Y ++ GF ++G K L E + G+ D + +I G +A+ +L
Sbjct: 521 -YTSLIHGFCRSGKWKDAKYLFNEMVDI---GVQPDVTTFSVLIDMLCKEGKVIEANELL 576
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+ M GC Y +K C R +EATQL M + G DV Y L++ +
Sbjct: 577 EVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQT 636
Query: 452 QDFQSAFSLFRDM-REARIYDLK-----GSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ ++A L + M + Y SY I+ GL ++ R + E ++ V
Sbjct: 637 GNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKE-MKALGV 695
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ S+IH FC++G+LEDAK M+ + N TY +I+G+ Q
Sbjct: 696 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQ 749
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 144/331 (43%), Gaps = 26/331 (7%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLM----NEFGFSSQ-- 290
+S+A ++ +M LG RP+ ++G L G + L M +++G +
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN---VK 347
+V YS +I G K E +R + + M S Y ++ GF ++G K
Sbjct: 121 LVSYSIIIDGLCK-DRREDEARELFKEMKAQGMMPDVIS---YTSLIHGFCRSGKWEKAK 176
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
L N +++ GI D + +I G +A+ +L+ M GC + + Y
Sbjct: 177 CLFNEMLDV------GIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYS 230
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-RE 466
+K C +HR +EAT+L M + G + D Y L++ + + +A L ++M +
Sbjct: 231 TLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLND 290
Query: 467 ARIYDLKG-----SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
Y +K SY I+ GL ++ R + E ++ + + ++IH FC
Sbjct: 291 TGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKE-MKAQGIMPDVISYTTLIHGFCL 349
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+G+ E AK M+ + +P+ T LI+
Sbjct: 350 SGKWEKAKCLFNEMLDVGIQPDVTTSSVLID 380
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 142/331 (42%), Gaps = 26/331 (7%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL-ESLMNEFG-----FSSQ 290
+S+A ++ +M LG RP+ ++G L G ++L + ++N+ G
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN---VK 347
++ YS +I G K E +R + + + S Y ++ GF +G K
Sbjct: 302 LISYSIIIDGLCK-DRREDEARELFKEMKAQGIMPDVIS---YTTLIHGFCLSGKWEKAK 357
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
L N +++ GI D + +I G +A+ +L+ + GC +
Sbjct: 358 CLFNEMLDV------GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCT 411
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-RE 466
+K C +HR ++ATQL + + G +V L++ S + + A L ++M +
Sbjct: 412 TLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSD 471
Query: 467 ARIYDLKG-----SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
Y + SY I+ GL + R + E ++ V + S+IH FC+
Sbjct: 472 TSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKE-MKALGVIPDVISYTSLIHGFCR 530
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+G+ +DAK M+ + +P+ T+ LI+
Sbjct: 531 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLID 561
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A+ +L+ M GC + + Y +K C +HR +EATQL M + G + D Y L+
Sbjct: 28 EANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLM 87
Query: 446 EASITSQDFQSAFSLFRDM-REARIYDLKG-----SYLTIMTGLMENHRPELMAAFLDEV 499
+ + A L ++M + Y +K SY I+ GL ++ R + E+
Sbjct: 88 KGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEM 147
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+ + S+IH FC++G+ E AK M+ + + T LI+
Sbjct: 148 KAQGMMP-DVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLID 199
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 5/163 (3%)
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
+CKE + EA +L+ + G LD+ Y LI+ A LF M++
Sbjct: 20 FCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPD 79
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDP-----RVEVKTHDWNSIIHAFCKAGRLED 527
+Y T+M GL + + + E++ D + + ++ II CK R ++
Sbjct: 80 AIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDE 139
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
A+ + M P+ +Y SLI+G+ + ++ +++E+
Sbjct: 140 ARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEM 182
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 217 KPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
KP++ + + ++G C +G + +A ++ + M LGV PN S+ L + + G E
Sbjct: 661 KPDVISYSIIIDGLCKHGRED--EARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 718
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
L + M + G V YS +I G+ K G ++ A
Sbjct: 719 KHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 16/314 (5%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G+ PN S+ + + K ++ M + GF+ V ++ L+ GY K G++E+A
Sbjct: 279 GISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENA 338
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV---KGLANLIIEAQKLEPSGIVVD 367
+I + N+ +D T ++KG + G + L N + +Q P+ + +
Sbjct: 339 F-SIFHRMKDANILPTD---TTLGIIIKGLCKAGRSFEGRDLFNKFV-SQGFVPTCMPYN 393
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
II + G + A ++ EM G + Y + +CK + A +L+
Sbjct: 394 T-----IIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLN 448
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME-N 486
D+ GL++D+ Y LI+ +D +SA L ++R A + + Y +++TG N
Sbjct: 449 DMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMN 508
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ E + + V E ++KT + S+I K+GRL A M+ P+D+
Sbjct: 509 NVEEAIDLYKKMVNEGIPCDLKT--YTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRA 566
Query: 547 YLSLINGYVTAEQY 560
+ LING Q+
Sbjct: 567 HTVLINGLCNKGQF 580
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 159/387 (41%), Gaps = 45/387 (11%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A ++ M G P E +F + +G + + L+ M G S + +SL+
Sbjct: 94 ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMK 153
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNV----------- 346
GY GNL SA + + +S +K TY ++ G +NGN+
Sbjct: 154 GYCMQGNLRSALVLV------NEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMK 207
Query: 347 -KGLA------NLIIEA----QKLEPSGIVVDRSVGFGI---------ISACVNLGLSDK 386
KG+ N I+E Q + + + + ++ G+ +S G ++
Sbjct: 208 TKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNE 267
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A ++ DE+ A G S + Y + +C++ A ++ ++ +G + + L++
Sbjct: 268 ACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMD 327
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
D ++AFS+F M++A I + I+ GL + R ++ V V
Sbjct: 328 GYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVP 387
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+N+II F K G + A R M + P+ TY SLI+G+ L +
Sbjct: 388 T-CMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKL 446
Query: 567 WHEIKRKISTDGQK-GIKFEHNLVDAF 592
+++KRK G K IK L+D F
Sbjct: 447 LNDMKRK----GLKMDIKAYGTLIDGF 469
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 118/279 (42%), Gaps = 15/279 (5%)
Query: 169 FKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALE 228
F ++ F+P + ++D K N V+ E C + + P+ + ++
Sbjct: 380 FVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI-------TPSTVTYTSLID 432
Query: 229 GCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFS 288
G C G ++ A K++ M G++ + ++G L + + + EL + + G S
Sbjct: 433 GFCKG-NNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLS 491
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKG 348
Y+S+I+G+ + N+E A + E +TY ++ G L++G +
Sbjct: 492 PNRFIYNSMITGFKNMNNVEEAIDLYKKMVN----EGIPCDLKTYTSLIDGLLKSGRLLY 547
Query: 349 LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
+++ E + GI+ D +I+ N G + A IL++MN + +Y
Sbjct: 548 ASDIHTE---MLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNT 604
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ + KE EA +L ++ GL D YD L+
Sbjct: 605 LIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 110/283 (38%), Gaps = 47/283 (16%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKG 339
M E G + V Y+SLI G+ K N++ A + + +M++ + Y ++ G
Sbjct: 415 MCEVGITPSTVTYTSLIDGFCKGNNIDLALKLL------NDMKRKGLKMDIKAYGTLIDG 468
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
F + ++K L+ E L +G+ +R + +I+ N+ ++A + +M G
Sbjct: 469 FCKRRDMKSAHELLNE---LRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI 525
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
L Y + K R A+ + ++ S G+ D + LI F++A
Sbjct: 526 PCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARK 585
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAF 519
+ DM +N P ++ +N++I
Sbjct: 586 ILEDMNG------------------KNMIPSVLI------------------YNTLIAGH 609
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
K G L++A R M+ P++ TY L+NG + FS
Sbjct: 610 FKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDGNFS 652
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 65/164 (39%), Gaps = 1/164 (0%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
L+A KE EA Q + + G++LD Y + + A SL R+MR A
Sbjct: 47 LRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGW 106
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+G++ +++T ++ D++V + + S++ +C G L A
Sbjct: 107 IPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGK-SMNLAVATSLMKGYCMQGNLRSAL 165
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ + PN TY LI+G + E+K K
Sbjct: 166 VLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTK 209
>gi|449507432|ref|XP_004163031.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Cucumis sativus]
Length = 1061
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 156/398 (39%), Gaps = 86/398 (21%)
Query: 210 DENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG-VRPNESSF----GFLAY 264
DEN+++ N + C++ + G C + A K E LG ++PN ++ G L
Sbjct: 177 DENVNYPFDN-FVCSSVISGFC-NIGKPELALKFFENAKTLGNLKPNLVTYTAVIGALCK 234
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL----------------- 307
L+ + + + + E+E F +VFYS I GY+ G L
Sbjct: 235 LHRVNQVSDLVCEMEKENLAF----DVVFYSCWICGYIAEGMLLDAFKRNREMVQKGIRP 290
Query: 308 ESASRTILL--CLGGGNMEQS------------DFSKETYCEVVKGFLQNGNVKGLANLI 353
++ S TIL+ GN+E++ + S TY ++ GF + G ++ +L
Sbjct: 291 DTISCTILIYGLSKLGNVEKAFGVLERMRKSGLELSSVTYTVIMLGFCKKGKLEEAFSLF 350
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ LE + VD + +I C G D+ +LDEM G + Y +
Sbjct: 351 EMVKGLE---MEVDEFMYATLIDGCCRKGDFDRVFGLLDEMETRGMKSSIVTYNTVINGL 407
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK RT+EA +L S GL DV Y L+ I Q+
Sbjct: 408 CKWGRTSEADRL-----SKGLHGDVITYSTLLHGYIQEQN-------------------- 442
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+TG+ E R +ED + + N +I A G EDA +
Sbjct: 443 ------ITGIFETKRR----------LEDAGISLDVIMCNVLIKALFMVGAYEDAYILYK 486
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
RM + N TY +LINGY + +++E K
Sbjct: 487 RMPEIGLAANSVTYHTLINGYCNICRIDEAFEIFNEFK 524
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 20/240 (8%)
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGF 261
E I + + MK NI N ++G C LQS + A ++ +++ LG+ P E ++G
Sbjct: 729 EALDICVSAKTNGMKLNIICYNIVIKGLC--LQSRLIQAFQLFDSLERLGLIPTEITYGT 786
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L +G E +L M G Y+SLI GY+++G +E A + +L L G
Sbjct: 787 LIDSLCREGYLEDARQLFERMIPKGLKPNTHIYNSLIDGYIRIGQIEEAFK-LLHELRTG 845
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
+FS + +K + Q G+++G + E + GI D +I
Sbjct: 846 AFNPDEFSVSS---AIKAYCQKGDMEGALSFFFE---FKNEGISPDFLGFLYLIRGLCAK 899
Query: 382 GLSDKAHSILDE----------MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
G ++A IL E +N + L C+E R EA ++ ++ +
Sbjct: 900 GRMEEARDILRETIQSQSVMELINKVDTEIEAESIGSALTHLCEEGRILEAYTILNEVGT 959
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 78/174 (44%), Gaps = 4/174 (2%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + CK + +EA + + ++G++L++ Y+ +I+ AF LF +
Sbjct: 714 YSTLVHGLCKGGQMSEALDICVSAKTNGMKLNIICYNIVIKGLCLQSRLIQAFQLFDSLE 773
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR-VEVKTHDWNSIIHAFCKAGR 524
+ + +Y T++ L E + ++ P+ ++ TH +NS+I + + G+
Sbjct: 774 RLGLIPTEITYGTLIDSLCREGYLEDARQLFERMI--PKGLKPNTHIYNSLIDGYIRIGQ 831
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK-ISTD 577
+E+A + L + F P++ + S I Y L + E K + IS D
Sbjct: 832 IEEAFKLLHELRTGAFNPDEFSVSSAIKAYCQKGDMEGALSFFFEFKNEGISPD 885
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 148/397 (37%), Gaps = 102/397 (25%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
++P+ +C + YGL + + EK V+E M G+ + ++ + + KG
Sbjct: 288 IRPDTISCTILI----YGLSKLGNVEKAFGVLERMRKSGLELSSVTYTVIMLGFCKKGKL 343
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL--------ESASR----------TI 314
E+ L ++ Y++LI G + G+ E +R T+
Sbjct: 344 EEAFSLFEMVKGLEMEVDEFMYATLIDGCCRKGDFDRVFGLLDEMETRGMKSSIVTYNTV 403
Query: 315 L--LCLGGGNMEQSDFSKE------TYCEVVKGFLQNGNVKG------------------ 348
+ LC G E SK TY ++ G++Q N+ G
Sbjct: 404 INGLCKWGRTSEADRLSKGLHGDVITYSTLLHGYIQEQNITGIFETKRRLEDAGISLDVI 463
Query: 349 LANLIIEA--------------QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+ N++I+A +++ G+ + +I+ N+ D+A I +E
Sbjct: 464 MCNVLIKALFMVGAYEDAYILYKRMPEIGLAANSVTYHTLINGYCNICRIDEAFEIFNEF 523
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
C + VY +KA C+E R +A ++ ++++ + L LDVG LI
Sbjct: 524 KLASCD-SVAVYNSIIKALCREGRGEKAFEVFIELNLNVLTLDVGVCKMLIRT------- 575
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
I++ KG+ GL E A + E VE +V + N
Sbjct: 576 --------------IFEEKGA-----AGLCE-------ALYGMEKVEQ---DVYNNTCND 606
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
I CK G E A RM+ + +T+ LI
Sbjct: 607 AIRFLCKRGFSEMASEFYSRMMRTRLLLEKKTFYFLI 643
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 67/167 (40%), Gaps = 7/167 (4%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A + D + G Y + + C+E +A QL + GL+ + Y++LI
Sbjct: 764 QAFQLFDSLERLGLIPTEITYGTLIDSLCREGYLEDARQLFERMIPKGLKPNTHIYNSLI 823
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ I + AF L ++R + S + + + E +F E ++ +
Sbjct: 824 DGYIRIGQIEEAFKLLHELRTGAFNPDEFSVSSAIKAYCQKGDMEGALSFFFE-FKNEGI 882
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+ +I C GR+E+A+ LR I Q+ + LIN
Sbjct: 883 SPDFLGFLYLIRGLCAKGRMEEARDILRETI------QSQSVMELIN 923
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 154/354 (43%), Gaps = 29/354 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ A + + G C S DA ++ M+ G P+ ++ + +G+ E+
Sbjct: 41 VTPSTVAYTSLIHGLCMA-NSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEA 99
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+L M E G +V Y++++ G K +E A LL ++ ++
Sbjct: 100 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA----LLLFNEMERLGCTPNRRSHNT 155
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHS 389
++ G Q + + +EA+ + P GI++D G+ A G ++A+
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILID-----GLAKA----GKLNEAYK 206
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ M G + Y + C + EA +L + S G + ++ LI+A
Sbjct: 207 LFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHC 266
Query: 450 TSQDFQSAFSLFRDMRE-ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRV 505
AF L + M + + D+ +Y T+++GL R + L+++V+ P V
Sbjct: 267 KRGKLDEAFRLLKRMTDDGHVPDVV-TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 325
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ N++IH CKAGR+++A+ L M+ P+ TY +L++G+ A Q
Sbjct: 326 VTQ----NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 170/402 (42%), Gaps = 25/402 (6%)
Query: 175 MPFELWG-GFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG 233
+P + W G L+D K K+F+ LD + P+ N + G C
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQR----MLDSGI---TPSAVTYNVVIHGMCLA 233
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
++ +A ++ ++M G RP+ +F L + +G ++ L M + G +V
Sbjct: 234 Y-TLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVT 292
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
YS+LISG + ++ A R +L + + + ++ T ++ G + G +K A +
Sbjct: 293 YSTLISGLCSIARVDDA-RHLLEDMVKRQCKPTVVTQNT---LIHGLCKAGRIKE-AREV 347
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
++A + SG D ++ G +++A +L +M A G + + Y +
Sbjct: 348 LDA--MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK +R EA + + SSG ++ Y ALI ++ LF +M A I
Sbjct: 406 CKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDH 465
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFC-----KAGRLEDA 528
Y T+ L ++ R +A E++ + R +++ W ++ F +AG++E A
Sbjct: 466 VVYGTLAAELCKSGR----SARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMA 521
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+R M+ P + SL+ G + Q + EI
Sbjct: 522 LGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 114/281 (40%), Gaps = 13/281 (4%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+Y ++ G + G + NL QKL SG+ +I D A +
Sbjct: 12 SYGILIDGLAKAGKLNDARNLF---QKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+MN GC Y + A CK EA L+ + G DV Y+ +++ S
Sbjct: 69 ADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ A LF +M + S+ TI+ GL + + + E +E + +
Sbjct: 129 SRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHE-MEAKDIPPDSWS 187
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+ +I KAG+L +A + +RM+ P+ TY +I+G A L ++ ++
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 572 RKISTDGQKGIKFEHN-LVDAFLYALVKGGFFDAVMQVVEK 611
K G + +F N L+DA K G D +++++
Sbjct: 248 SK----GCRPSRFTFNILIDAH----CKRGKLDEAFRLLKR 280
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 128/311 (41%), Gaps = 20/311 (6%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
V P+ S+G L A G L + G + V Y+SLI G + + A
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA- 64
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
R + + N S TY ++ + G ++ +LI +K+ G V D
Sbjct: 65 RELFADM---NRRGCPPSPVTYNVMIDASCKRGMLEEACDLI---KKMIEDGHVPDVVTY 118
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
++ ++A + +EM GC+ + + C++ + +A Q+ ++ +
Sbjct: 119 NTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEA 178
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
+ D +Y LI+ + A+ LF+ M ++ I +Y ++ G+
Sbjct: 179 KDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGM-------C 231
Query: 492 MAAFLDEVVE------DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+A LDE +E +N +I A CK G+L++A R L+RM P+
Sbjct: 232 LAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVV 291
Query: 546 TYLSLINGYVT 556
TY +LI+G +
Sbjct: 292 TYSTLISGLCS 302
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 141/350 (40%), Gaps = 30/350 (8%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+ + NA L G G + V AEK + V P+ +F + G K
Sbjct: 153 RPSTSSVNALLAGL-VGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF-------- 328
++ + +G + + Y+SLI GY K G G GNM D
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKG-------------GAGNMYHVDMLLKEMVEA 258
Query: 329 ----SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
+ T+ ++ G+ +N N + ++++ GI +IS + G
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVF---EEMKQQGIAASVVTYNSLISGLCSEGKV 315
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
++ +++EM G S + LK +CK+ A+A + ++ ++ DV Y L
Sbjct: 316 EEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTIL 375
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I+ + A ++ M + I +Y ++TG + + LDE+ E
Sbjct: 376 IDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK-G 434
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+E +N +I A C G + A + L M + EPN TY ++I G+
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 140/331 (42%), Gaps = 20/331 (6%)
Query: 176 PFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ 235
P + G L++ KNSN A ++VFEE + + ++ N+ + G C
Sbjct: 262 PTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGI-------AASVVTYNSLISGLC-SEG 313
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
V + K++E M LG+ PNE +FG + + KG+ + M E +V Y+
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYT 373
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI 353
LI GY +LG +E A M + S TY ++ GF ++G+ + + L+
Sbjct: 374 ILIDGYRRLGKMEDAMAV------KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
E ++ GI D +I A G KA +LDEM+ G Y ++ +
Sbjct: 428 DE---MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C + A ++ + + +V Y+ I+ A L +M + +
Sbjct: 485 CDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNG 544
Query: 474 GSYLTIMTGLME-NHRPELMAAFLDEVVEDP 503
+Y TI G+ME + P++ + + E+P
Sbjct: 545 ITYETIKEGMMEKGYTPDIRGCTVSQASENP 575
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 161/381 (42%), Gaps = 29/381 (7%)
Query: 189 RKNSNFVAFLKVFEECCRIA-LDENLDFMK--------PNIYACNAALEGCCY--GLQSV 237
R + + F V CRI L + D K P++ N+ ++G C G ++
Sbjct: 186 RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNM 245
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+ +++ M G+ P +FG L Y V + M + G ++ +V Y+SL
Sbjct: 246 YHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSL 305
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI-- 353
ISG G +E + + ME S T+ V+KGF + G + + I
Sbjct: 306 ISGLCSEGKVEEGVKLM------EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ + +EP VV ++ +I LG + A ++ + M G S + Y + +
Sbjct: 360 MTERNVEPD--VVIYTI---LIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
+ A+ L+ ++ G++ DV Y+ LI A + + A L +M E +
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNH 474
Query: 474 GSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+Y TI+ G + + + +A+ + +E R +N I FC+ G++++A L
Sbjct: 475 LTYNTIIQGFCD--KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLL 532
Query: 533 RRMIFLQFEPNDQTYLSLING 553
M+ PN TY ++ G
Sbjct: 533 NEMLDKCLVPNGITYETIKEG 553
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 132/329 (40%), Gaps = 32/329 (9%)
Query: 332 TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
T+ V+ G + G ++ ++ I+A L PS + S+ I C G + H
Sbjct: 193 TFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPS-VATYNSL---IDGYCKKGGAGNMYHV 248
Query: 390 --ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+L EM G S + + YCK TA A ++ ++ G+ V Y++LI
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ + L +M + + + ++ ++ G + ++D + E VE
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER-NVEP 367
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+ +I + + G++EDA M PN TY LI G+ + + S +
Sbjct: 368 DVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV---------- 617
E+K +KGI+ + + + AL G ++++++ E+ +
Sbjct: 428 DEMK-------EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Query: 618 ---FVDKWKYKQAFMENHKKLKVAKLRKR 643
F DK K A+ + ++ K RKR
Sbjct: 481 IQGFCDKGNIKSAY---EIRTRMEKCRKR 506
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 169/427 (39%), Gaps = 53/427 (12%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N+ ++ C +++ AE V+ M GV P+ ++ + + Y+ G ++ +
Sbjct: 265 PDVGTYNSIVDALCKA-RAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAK 323
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M G V +SS +S K G + A G+M +Y ++
Sbjct: 324 MFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDI----VSYSILL 379
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G+ G + NL + GIV + +ISA G+ D+A + EM
Sbjct: 380 HGYATEGRFADMNNLF---HSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQ 436
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + Y + A+C+ R A+A + + S G++ + Y +LI D A
Sbjct: 437 GVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKA 496
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD------ 511
+M + GL HRP ++ F ++ +E + D
Sbjct: 497 KEFISEM--------------MSKGL---HRPNIV--FFSSIIHSLCIEGRVMDAQDVFN 537
Query: 512 -------------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+NS+I +C G++E A L M+ + EP+ T +L++GY +
Sbjct: 538 LVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSG 597
Query: 559 QYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVF 618
+ L+++ E+ K K +N+V L L++ G A ++ + +
Sbjct: 598 KIDDGLILFREMLHK----KVKPTTVTYNIV---LDGLLRAGRTSAAKKMFHEMIDSGTA 650
Query: 619 VDKWKYK 625
VD YK
Sbjct: 651 VDIDTYK 657
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 149/357 (41%), Gaps = 36/357 (10%)
Query: 227 LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELESLMNEF 285
L+ C+ ++ + ++ MS L P+ S+ + L QE + ++ + E
Sbjct: 166 LKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEG 225
Query: 286 G-FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQ 342
G S +V ++++I G+ K G + A C M Q + TY +V L
Sbjct: 226 GRCSPDVVSFNTVIHGFFKQGEVSKA------CNLFNEMVQKGVVPDVGTYNSIVDA-LC 278
Query: 343 NGNVKGLANLIIEA---QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
A ++ + +EP G+ + II G ++ + +M + G
Sbjct: 279 KARAMDKAEFVLRQMVDKGVEPDGVTYN-----AIIHGYSCSGHWKESAKMFRKMTSKGL 333
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
+ + + CK R+ +A ++ +++ G D+ +Y L+ T F +
Sbjct: 334 IPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNN 393
Query: 460 LFRDMREARIYDLKGSYLTIMT-----GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
LF M + I +++ G+M+ E M F + + R V T +++
Sbjct: 394 LFHSMADKGIVSNCHCINILISAHAKRGMMD----EAMLVFTEMQGQGVRPNVVT--YST 447
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY------VTAEQYFSVLM 565
+I AFC+ GRL DA +MI + EPN Y SLI+G+ V A+++ S +M
Sbjct: 448 LISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMM 504
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 13/195 (6%)
Query: 410 LKAYCKEHRTAEATQLVMD-ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE-- 466
LK C RT EA +++ +S D +Y+ +I++ Q A + + M +
Sbjct: 166 LKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEG 225
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-EVKTHDWNSIIHAFCKAGRL 525
R S+ T++ G + +E+V+ V +V T +NSI+ A CKA +
Sbjct: 226 GRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGT--YNSIVDALCKARAM 283
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFE 585
+ A+ LR+M+ EP+ TY ++I+GY + W E + KG+ +
Sbjct: 284 DKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGH-------WKESAKMFRKMTSKGLIPD 336
Query: 586 HNLVDAFLYALVKGG 600
+F+ +L K G
Sbjct: 337 TVTFSSFMSSLCKHG 351
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 147/361 (40%), Gaps = 16/361 (4%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
DAE++ + M+ G P+ S+ L + YA +G + L M + G S + LI
Sbjct: 355 DAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILI 414
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
S + K G ++ A G G TY ++ F + G LA+ + + +
Sbjct: 415 SAHAKRGMMDEAMLVFTEMQGQGVRPNV----VTYSTLISAFCRMGR---LADAMEKFSQ 467
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL-KAYCKEH 417
+ GI + +V +I G KA + EM + G V+ ++ + C E
Sbjct: 468 MISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEG 527
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
R +A + + G + + +++LI+ + AF + M I +
Sbjct: 528 RVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNN 587
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
T+++G ++ + + E++ +V+ T +N ++ +AGR AK+ MI
Sbjct: 588 TLVSGYCKSGKIDDGLILFREMLHK-KVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMID 646
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALV 597
+ TY L+ G + + ++H++ G KF+ +++ + AL
Sbjct: 647 SGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL-------GAMDCKFDITILNTMINALY 699
Query: 598 K 598
K
Sbjct: 700 K 700
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 105/248 (42%), Gaps = 11/248 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN ++ + G C V E + E MS RPN F + + ++G
Sbjct: 473 IEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDA 532
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++ +L+ G +V ++SLI GY +G +E A +L + +E + T
Sbjct: 533 QDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAF-GVLDAMVSVGIEPDVVTNNT--- 588
Query: 336 VVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+V G+ ++G + L E +K++P+ + + ++ + G + A + E
Sbjct: 589 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNI-----VLDGLLRAGRTSAAKKMFHE 643
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G +V + Y LK C+ T EA L + + + D+ + +I A +
Sbjct: 644 MIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRR 703
Query: 454 FQSAFSLF 461
+ A LF
Sbjct: 704 REEANDLF 711
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 187/479 (39%), Gaps = 108/479 (22%)
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIA-LDENLDFMK----------PNIYACNAALEGC 230
G LV + F A+ K + C LDE L ++ P+ ++ N + G
Sbjct: 147 GLLVAAGARPDTF-AWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGL 205
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
+ SDA KV + M GV PN+ ++ + + G E L M + G
Sbjct: 206 WRSGKG-SDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPN 264
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
+V Y+ L+SG + G ++ +R ++ + +M F TY + G + G+ + +
Sbjct: 265 VVTYNVLLSGLCRAGRMDE-TRALMDEMTSYSMLPDGF---TYSILFDGLTRTGDSRTML 320
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
+L E+ K G+++ A CS+ L
Sbjct: 321 SLFGESLK---KGVII----------------------------GAYTCSI-------LL 342
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
CK+ + A+A Q++ + +GL Y+ LI +D Q AFS+F M+ I
Sbjct: 343 NGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIR 402
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVE------DPRVE------------------ 506
+Y ++ GL + E++ D V+E DP VE
Sbjct: 403 PDHITYNALINGLC---KMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKC 459
Query: 507 -----------VKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+K++ + S++ AFCK G++ +A L MI PN Q Y S+I+
Sbjct: 460 FTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDA 519
Query: 554 YVTA---EQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVV 609
Y+ + EQ F ++ K+ + G F +NL L L K D +++
Sbjct: 520 YIESGGTEQAFLLV-------EKMKSSGVSASIFTYNL---LLKGLCKNSQIDEAEELI 568
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 140/335 (41%), Gaps = 54/335 (16%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKI 275
P N + G C ++ + A + E M +RP+ ++ L + GL E I
Sbjct: 368 PTTAIYNTLINGYCQ-VRDLQGAFSIFEQMKSRHIRPDHITYNAL-----INGLCKMEMI 421
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
E E L+ E G + +++LI Y + G LE T+L + ++ + S
Sbjct: 422 TEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCF-TVLSDMQDKGIKSNVIS--- 477
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+ VVK F +NG + ++ + +V + V II A + G +++A +++
Sbjct: 478 FGSVVKAFCKNGKIPEAVAIL---DDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVE 534
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M + G S + Y LK CK + EA +L+ ++++ GL+ DV +Y+ +I A
Sbjct: 535 KMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKG 594
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
D A L ++M + YD+ RP L +
Sbjct: 595 DTDRALELLQEMHK---YDI---------------RPTL------------------RTY 618
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+ ++ A AGR+ D + + M+ EP+ Y
Sbjct: 619 HPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY 653
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 135/307 (43%), Gaps = 23/307 (7%)
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
E+++E+ + G Y++LI+GY ++ +L+ A M+ +
Sbjct: 355 EQVLEM---LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIF------EQMKSRHIRPDH 405
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY ++ G + + +L++E +E SG+ +I A G +K ++
Sbjct: 406 ITYNALINGLCKMEMITEAEDLVME---MEKSGVDPSVETFNTLIDAYGRAGQLEKCFTV 462
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L +M G + + +KA+CK + EA ++ D+ + + Y+++I+A I
Sbjct: 463 LSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIE 522
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR----PELMAAFLDEVVEDPRVE 506
S + AF L M+ + + +Y ++ GL +N + EL+ ++ + R +
Sbjct: 523 SGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGL---RPD 579
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
V + +N+II A C G + A L+ M P +TY L++ +A + + +
Sbjct: 580 VVS--YNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECL 637
Query: 567 WHEIKRK 573
+ + K
Sbjct: 638 YQHMVHK 644
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 168/417 (40%), Gaps = 47/417 (11%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V +A++++ M+ G++PN ++ + +G +E+ + S +V Y+S
Sbjct: 332 VGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTS 391
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
L+ Y GN+ +A+R + M Q + TY +++ + G L+
Sbjct: 392 LLHAYCSKGNIAAANRIL------DEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLL- 444
Query: 355 EAQKLEPSGIVVDRSVGFGII--SACVNLGLSDKAHSILDEM--NACGCSVGLG------ 404
+++ G +D + G II C N L D A I+D M G LG
Sbjct: 445 --ERMNEKGYSLD-TAGCNIIIDGLCRNSRL-DVAMDIVDGMWEEGSGALGRLGNSFLSV 500
Query: 405 ---------------VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
Y + A CKE R EA + ++++ + D YD I
Sbjct: 501 VSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYC 560
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
A + RDM + +Y ++ G E H+ E + + E+ E +
Sbjct: 561 KHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKG-ISPNV 619
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+NS+I +FC+ G + A L M+ + PN ++ LI Y + S M++
Sbjct: 620 MTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDA 679
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ 626
R T GQK + + + Y G + +A ++E + EM+V + + YKQ
Sbjct: 680 ALR---TCGQKEVLYCLMCTELTTY----GKWIEA-KNILEMALEMRVSIQSFPYKQ 728
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 139/602 (23%), Positives = 241/602 (40%), Gaps = 109/602 (18%)
Query: 4 RKEASFMLIRKKFFCSSSSTSPETPSLYSFL------QPS---IFSLKRKSLQQDPPNSP 54
R AS + + F SS+ P P SFL P+ + L + + P SP
Sbjct: 16 RNAASPAVALRLFLHLSSAACPPPPRSTSFLARLVAEHPAADALLPLLHRHILSFPDPSP 75
Query: 55 TQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLS 114
L+ ++ L + A++S ++LT+ + P+ PV N LI L+
Sbjct: 76 ---HLLALLSCSDVLPLRLAI----------PAFRSLRALTS-APPPTTPVYNRLI--LA 119
Query: 115 SLQDNH-NLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRY 173
+L+++ +L A + + P D T + LL ++ +A A + M
Sbjct: 120 ALRESRLDLVEALYKDLLLSGAQP---DVFTRNLLLQALCDAGRMELAQRVFDAMPARNE 176
Query: 174 FMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKP-NIYACNAALEGCCY 232
F L G+ CR + A LKV LD M N+ CN + G C
Sbjct: 177 FSFGILARGY----CRAGRSIDA-LKV------------LDGMPSMNLVVCNTVVAGFCK 219
Query: 233 -GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE---FGFS 288
GL V +AE+++E M V G+ PN +F G + M E G
Sbjct: 220 EGL--VEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLP 277
Query: 289 -SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV- 346
V + ++SG+ G ++ A + + GG + + E+Y + G ++NG V
Sbjct: 278 RPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRV----ESYNRWLSGLVRNGRVG 333
Query: 347 -----------KGLA------NLII----------EAQKLE---PSGIVVDRSVGF-GII 375
+G+ N+I+ +A+++E SG++ V + ++
Sbjct: 334 EAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLL 393
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
A + G A+ ILDEM GC+ Y L++ + RT EA +L+ ++ G
Sbjct: 394 HAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYS 453
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMRE---ARIYDLKGSYLTIMTGLMENHRPELM 492
LD + +I+ + A + M E + L S+L++++ + R
Sbjct: 454 LDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQR---- 509
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
D++ ++ +I A CK GR ++AK+ L MI P+ Y + I+
Sbjct: 510 -CLPDQIT-----------YSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIH 557
Query: 553 GY 554
GY
Sbjct: 558 GY 559
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 82/207 (39%), Gaps = 14/207 (6%)
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
VY + A +E R L D+ SG Q DV + L++A + + A +F M
Sbjct: 112 VYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAM 171
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
+ S+ + G R LD + P + + N+++ FCK G
Sbjct: 172 PARNEF----SFGILARGYCRAGRSIDALKVLDGM---PSMNLVV--CNTVVAGFCKEGL 222
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF 584
+E+A+R + RM PN T+ + I+ A + ++ +++ D Q G+
Sbjct: 223 VEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQE----DWQHGLPR 278
Query: 585 EHNLV-DAFLYALVKGGFFDAVMQVVE 610
+ D L GF D +V+
Sbjct: 279 PDQVTFDVMLSGFCDAGFVDEARVLVD 305
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 155/375 (41%), Gaps = 52/375 (13%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVL---GVRPNESSFGFLAYLYALKGLQEKI 275
N+Y N + C EKV +S + GV P+ ++ L Y+ KGL E+
Sbjct: 234 NVYTLNIMVNALCKD----GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS------------------RTILL- 316
EL + M GFS + Y+++I+G K G E A R++L+
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 317 -CLGG---------GNMEQSDFSKETYC--EVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
C G +M D + C ++ F ++GN L ++ ++ +G+
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN---LDKALMYFNSVKEAGL 406
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ D + +I G+ A ++ +EM GC++ + Y L CK EA +
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L +++ L D LI+ + Q+A LF+ M+E RI +Y T++ G
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 485 E----NHRPELMAAFLD-EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ + E+ A + E++ P ++ +++A C G L +A R MI
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTP------ISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 540 FEPNDQTYLSLINGY 554
+P S+I GY
Sbjct: 581 IKPTVMICNSMIKGY 595
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 148/362 (40%), Gaps = 78/362 (21%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ N L G C + + +A+K+ M+ + P+ + L + G + +EL
Sbjct: 444 DVVTYNTILHGLC-KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M E +V Y++L+ G+ K+G++++A KE + ++V
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA-------------------KEIWADMV- 542
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
++++ P+ I S+ +++A + G +A + DEM +
Sbjct: 543 -----------------SKEILPTPI--SYSI---LVNALCSKGHLAEAFRVWDEMISKN 580
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ + +K YC+ ++ + + S G D +Y+ LI + ++ AF
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
L + M E + GL+ P++ +NSI+H
Sbjct: 641 GLVKKMEEEQ------------GGLV----PDVFT------------------YNSILHG 666
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTD 577
FC+ ++++A+ LR+MI P+ TY +ING+V+ + + E ++R S D
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Query: 578 GQ 579
+
Sbjct: 727 DK 728
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 154/392 (39%), Gaps = 48/392 (12%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
+I ACNA L G + V A V + +S GV N + + G EK+
Sbjct: 199 SIDACNA-LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTF 257
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEV 336
S + E G +V Y++LIS Y G +E A + G G FS TY V
Sbjct: 258 LSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG------FSPGVYTYNTV 311
Query: 337 VKGFLQNGNVK------------GLA-------NLIIEAQK-------------LEPSGI 364
+ G ++G + GL+ +L++EA K + +
Sbjct: 312 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
V D ++S G DKA + + G +Y ++ YC++ + A
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L ++ G +DV Y+ ++ + A LF +M E ++ SY +T L+
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF--PDSY--TLTILI 487
Query: 485 ENH--RPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
+ H L A L + +++ R+ + +N+++ F K G ++ AK M+ +
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
P +Y L+N + +W E+ K
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 36/297 (12%)
Query: 60 QQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDN 119
QQ D +T T LH EA K F +T +LFP LI D
Sbjct: 438 QQGCAMDVVT-YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI-------DG 489
Query: 120 H----NLKRAFASVVYVIEKNPKLLDFQTVHTLL---GSMRNANTAAPAFALVKCMFKNR 172
H NL+ A + EK +L D T +TLL G + + +TA +A + ++
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRL-DVVTYNTLLDGFGKVGDIDTAKEIWADMV----SK 544
Query: 173 YFMPFELWGGFLVD-ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCC 231
+P + LV+ +C K AF +V++E + +N+ KP + CN+ ++G C
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAF-RVWDE----MISKNI---KPTVMICNSMIKGYC 596
Query: 232 YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE--FGFSS 289
+ SD E +E M G P+ S+ L Y + + K L M E G
Sbjct: 597 RS-GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV 346
+ Y+S++ G+ + ++ A + + G + + TY ++ GF+ N+
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERG----VNPDRSTYTCMINGFVSQDNL 708
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 69/357 (19%), Positives = 134/357 (37%), Gaps = 49/357 (13%)
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
N+S F L Y + E +L+ GF+ + ++LI V++G +E A
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 315 LLCLGGGNMEQSDFSKETYCE--VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
+ +S Y +V ++G ++ + + + Q+ G+ D
Sbjct: 224 ------QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE---KGVYPDIVTYN 274
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
+ISA + GL ++A +++ M G S G+ Y + CK + A ++ ++ S
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMR--------------------------- 465
GL D Y +L+ + D +F DMR
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 466 --------EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKTHDWNSII 516
EA + Y ++ G + +E+++ ++V T +N+I+
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT--YNTIL 452
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
H CK L +A + M P+ T LI+G+ + + ++ ++K K
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 153/367 (41%), Gaps = 23/367 (6%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ + + G C + S A V + M G +PN ++ + L +
Sbjct: 195 EPNVISYTTVINGLC-KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
E S M E G + Y+S++ G+ LG L A+R +G M + T+ +
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNT----VTFTIL 309
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V G + G V A L+ E + G+ D S ++ L ++A + + M
Sbjct: 310 VDGLCKEGMVSE-ARLVFET--MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIR 366
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
GC+ G Y + YCK R EA L+ ++ L D Y L++ +
Sbjct: 367 KGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKE 426
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMEN-HRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A +LF++M + +Y+ ++ G ++ H E A L + +++ ++E + +
Sbjct: 427 ALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDE--ALKLLKSMKEKKLEPNIVHYTIL 484
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY----VTAEQYFSVLMMWHEIK 571
I AG+LE AK ++ P+ +TY +I G ++ E Y ++
Sbjct: 485 IEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAY--------DLF 536
Query: 572 RKISTDG 578
RK+ DG
Sbjct: 537 RKMEDDG 543
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 176/458 (38%), Gaps = 50/458 (10%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+Y+ N + C L V + V+ M LG+ P+ +F L +G ++ VEL
Sbjct: 127 NVYSLNILINCLCR-LNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVEL 185
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS------------------RTIL--LCL 318
+ M + G ++ Y+++I+G K GN A TI+ LC
Sbjct: 186 FNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCK 245
Query: 319 GGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
+ +F E TY +V GF G + L E + V+
Sbjct: 246 DRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD----VMP 301
Query: 368 RSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+V F I + G+ +A + + M G + Y + YC + EA ++
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVF 361
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ G +Y+ LI S+ A SL +M + +Y T+M GL +
Sbjct: 362 EIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQL 421
Query: 487 HRP-ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
RP E + F + P + T + ++ FCK G L++A + L+ M + EPN
Sbjct: 422 GRPKEALNLFKEMCSYGPHPNLVT--YVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIV 479
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAV 605
Y LI G A + L + E+ K+ DG + + + L+K G D
Sbjct: 480 HYTILIEGMFIAGK----LEVAKELFSKLFGDGTRP---DIRTYTVMIKGLLKEGLSDEA 532
Query: 606 MQVVEKSQEMKVFVDKWKYK---QAFMENHKKLKVAKL 640
+ K ++ + Y Q F++N +L
Sbjct: 533 YDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 570
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 129/326 (39%), Gaps = 14/326 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V DA M + RP+ FG +A K +V L + M+ F + + +
Sbjct: 74 VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
LI+ +L +++ + + G M + + T+ ++ G G +K L
Sbjct: 134 LINCLCRLNHVDFSVSVL------GKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFN 187
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
E K V+ + +I+ G + A + +M GC + Y + + C
Sbjct: 188 EMVKRGHEPNVISYTT---VINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLC 244
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
K+ +A + + ++ G+ +V Y++++ A LF++M +
Sbjct: 245 KDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTV 304
Query: 475 SYLTIMTGLM-ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
++ ++ GL E E F E + + VE +N+++ +C + +AK+
Sbjct: 305 TFTILVDGLCKEGMVSEARLVF--ETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFE 362
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQ 559
MI P +Y LINGY + +
Sbjct: 363 IMIRKGCAPGAHSYNILINGYCKSRR 388
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 114/286 (39%), Gaps = 14/286 (4%)
Query: 218 PNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
PN ++G C G+ VS+A V ETM+ GV P+ S++ L Y L+ L +
Sbjct: 301 PNTVTFTILVDGLCKEGM--VSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAK 358
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
++ +M G + Y+ LI+GY K ++ A + M + + TY
Sbjct: 359 KVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLL------AEMYHKALNPDTVTYS 412
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+++G Q G K NL E P +V + ++ G D+A +L M
Sbjct: 413 TLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVI---LLDGFCKHGHLDEALKLLKSM 469
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ Y ++ + A +L + G + D+ Y +I+ +
Sbjct: 470 KEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLS 529
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
A+ LFR M + SY ++ G ++N +DE+V
Sbjct: 530 DEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 575
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 170/426 (39%), Gaps = 61/426 (14%)
Query: 65 QDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKR 124
+ N+ S T ++ T NT A FK + N P+ VT S I + SL + +
Sbjct: 195 EPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNV-VTYSTI--IDSLCKDRLVND 251
Query: 125 AFASVVYVIEKN--PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGG 182
A + ++E+ P + + ++ ++ N A F + R MP +
Sbjct: 252 AMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMV----GRDVMPNTVTFT 307
Query: 183 FLVD-ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSV-SDA 240
LVD +C++ A L VFE ++ P+I NA ++G C LQ + ++A
Sbjct: 308 ILVDGLCKEGMVSEARL-VFETMTEKGVE-------PDISTYNALMDGYC--LQRLMNEA 357
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
+KV E M G P S+ L Y ++ L + M + V YS+L+ G
Sbjct: 358 KKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 417
Query: 301 YVKLGNLESASRTIL-LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQ 357
+LG + A +C G + TY ++ GF ++G++ L+ ++ +
Sbjct: 418 LCQLGRPKEALNLFKEMCSYGPHPNLV-----TYVILLDGFCKHGHLDEALKLLKSMKEK 472
Query: 358 KLEPS------------------------------GIVVDRSVGFGIISACVNLGLSDKA 387
KLEP+ G D +I + GLSD+A
Sbjct: 473 KLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEA 532
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ + +M G Y ++ + + ++ A +L+ ++ +++ + L++
Sbjct: 533 YDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD- 591
Query: 448 SITSQD 453
+ SQD
Sbjct: 592 -LESQD 596
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 111/504 (22%), Positives = 202/504 (40%), Gaps = 43/504 (8%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVH 146
A +F +T L P N+L+ H ++D + ++ P ++ F T
Sbjct: 133 ALSTFGKITKLGLHPDVVTFNTLL-HGLCVEDRVSEALNLFHQMFETTCRPNVVTFTT-- 189
Query: 147 TLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD-ICRKNSNFVAF--LKVFEE 203
L+ + A AL+ M ++ P ++ G +VD +C+K A L+ EE
Sbjct: 190 -LMNGLCREGRIVEAVALLDRMMEDG-LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
I PN+ +A ++ C + SDA+ + M G+ P+ ++ +
Sbjct: 248 VSHII---------PNVVIYSAIIDSLCKDGRH-SDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+ G +L M E S +V Y++LI+ +VK G A L G +
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNL 381
+ TY ++ GF + + ++ ++ + P+ I + +I
Sbjct: 358 PNT----ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT-----LIDGYCGA 408
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
D +L EM G Y + + A L+ ++ SSGL D+
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGS------------YLTIMTGLMENHRP 489
D L++ + + A +F+ M++++ DL S Y +++GL+ N
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSK-KDLDASHPFNGVEPDVQTYNILISGLI-NEGK 526
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
L A L E + + T ++S+I CK RL++A + M F PN T+ +
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 550 LINGYVTAEQYFSVLMMWHEIKRK 573
LINGY A + L ++ E+ R+
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRR 610
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 109/523 (20%), Positives = 207/523 (39%), Gaps = 47/523 (8%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
++ + T LH + + EA F + + P+ +L ++ L + A
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTL---MNGLCREGRIVEAV 204
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
A + ++E + T T++ M A L++ M + + +P + ++D
Sbjct: 205 ALLDRMMEDGLQPTQI-TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIET 246
K+ +F E + E F P+++ N+ + G C SDAE++++
Sbjct: 264 SLCKDGRHSDAQNLFTE-----MQEKGIF--PDLFTYNSMIVGFCSS-GRWSDAEQLLQE 315
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVK 303
M + P+ ++ L + +G K E E L +E G + YSS+I G+ K
Sbjct: 316 MLERKISPDVVTYNALINAFVKEG---KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
L++A L M S T+ ++ G+ + L+ ++
Sbjct: 373 QNRLDAAEHMFYL------MATKGCSPNLITFNTLIDGYCGAKRIDDGMELL---HEMTE 423
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
+G+V D + +I +G + A +L EM + G + L C + +
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Query: 422 ATQL--VM-----DISSS----GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
A ++ VM D+ +S G++ DV Y+ LI I F A L+ +M I
Sbjct: 484 ALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 543
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLED 527
+Y +++ GL + R + D + P V + ++I+ +CKAGR++D
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT----FTTLINGYCKAGRVDD 599
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
M N TY++LI G+ L ++ E+
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 117/295 (39%), Gaps = 23/295 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++G C G + + D +++ M+ G+ + +++ L + + L G ++
Sbjct: 393 PNLITFNTLIDGYC-GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA---------SRTILLCLGGGNMEQSDF 328
L M G +V +L+ G G L+ A S+ L N + D
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLS 384
+TY ++ G + G +EA++L GIV D +I
Sbjct: 512 --QTYNILISGLINEGK-------FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A + D M + S + + + YCK R + +L ++ G+ + Y L
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
I + A +F++M + +Y + ++TGL + A L+++
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 120/305 (39%), Gaps = 51/305 (16%)
Query: 341 LQNG--NVKGLAN---LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
LQ+G +KGL + L + + P VVD G++ V + D S+ +M
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVV---VRMERPDLVISLYQKME 106
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ + +K +C + A I+ GL DV ++ L+
Sbjct: 107 RKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVS 166
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP------------ 503
A +LF M E ++ T+M GL R A LD ++ED
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 504 -----------------RVEVKTH------DWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
++E +H +++II + CK GR DA+ M
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTDGQKGIKFEHNLVDAFLYALVKG 599
P+ TY S+I G+ ++ ++ + E ++RKIS D + + L++AF+ +G
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD----VVTYNALINAFVK---EG 339
Query: 600 GFFDA 604
FF+A
Sbjct: 340 KFFEA 344
>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 669
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 143/370 (38%), Gaps = 49/370 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ Y N L+G C G + AE+++E M PNE +F + GL +
Sbjct: 206 VAPDTYTYNTVLKGLC-GAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHA 264
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V+L M +G + +V YS+L++G+ + G ++ A +LL N + Y
Sbjct: 265 VQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDA--LVLL-----NTMLCKPNTVCYNA 317
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV-NLGLSDKAHSILDEM 394
+KG K + LI E + + F ++++C+ GL D A ++++M
Sbjct: 318 ALKGLCMAERWKDVGELIAEMVRKD----CPPNEATFSMLTSCLCQHGLVDCAMEVVEQM 373
Query: 395 NACGCSVGLGVY--------------------------------VPTLKAYCKEHRTAEA 422
GC + +Y LKA C+ R +
Sbjct: 374 QKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLCNPDTISFNAALKALCRTERWYDV 433
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+L+ + L ++ LI++ A +F M + R +Y +++ G
Sbjct: 434 EELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLING 493
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
E E + P + +N+++ C+A R EDA + M P
Sbjct: 494 FSEQGLVESAIELFQSMPCKPDI----FSYNAVLKGLCRAARWEDAGELIANMARKDCPP 549
Query: 543 NDQTYLSLIN 552
N+ T+ LIN
Sbjct: 550 NEITFNILIN 559
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 163/385 (42%), Gaps = 34/385 (8%)
Query: 212 NLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL 271
N KPN NAAL+G C + D ++I M PNE++F L GL
Sbjct: 304 NTMLCKPNTVCYNAALKGLCMA-ERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGL 362
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLGGGNMEQSDFS 329
+ +E+ M ++G +V Y++LI+ + + G ++ A + +LC N + F+
Sbjct: 363 VDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLC----NPDTISFN 418
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
+K + + LI AQ L +++ + I S C + GL + A
Sbjct: 419 A-----ALKALCRTERWYDVEELI--AQMLREDCPLIEMTFNILIDSLCQH-GLVNHAIE 470
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ ++M C+ + Y + + ++ A +L S + D+ +Y+A+++
Sbjct: 471 VFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIEL---FQSMPCKPDIFSYNAVLKGLC 527
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK- 508
+ ++ A L +M + ++ ++ L + F D +E + +
Sbjct: 528 RAARWEDAGELIANMARKDCPPNEITFNILINSLCQK-------GFADRAIEVFKQMPEY 580
Query: 509 --THD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
T D +N++I+ F + GRL+DA L M +P+ +Y S + G AE++
Sbjct: 581 GSTPDIFTYNALINGFSEQGRLDDALNLLSTM---SCKPDAISYNSTLKGLCRAERWKEA 637
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNL 588
+ E+ RK + K+ + L
Sbjct: 638 EEIVAEMLRKKCPPNEVTFKYANQL 662
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 126/347 (36%), Gaps = 31/347 (8%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTV 145
E WK L A + P + + L+S H L VV ++K D
Sbjct: 326 ERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIY 385
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECC 205
+TL+ A L+ M N + F L +CR + EE
Sbjct: 386 NTLINYFSEQGRVDDALMLLDSMLCNPDTISF---NAALKALCRTERWY-----DVEELI 437
Query: 206 RIALDENLDFMKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
L E+ ++ N ++ C +GL V+ A +V E M P+ ++ L
Sbjct: 438 AQMLREDCPLIEMTF---NILIDSLCQHGL--VNHAIEVFEQMPKYRCTPDIVTYSSLIN 492
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
++ +GL E +E L + Y++++ G + E A I NM
Sbjct: 493 GFSEQGLVESAIE---LFQSMPCKPDIFSYNAVLKGLCRAARWEDAGELI------ANMA 543
Query: 325 QSDFSKETYCEVVKGFLQNGNV-KGLANLIIEAQKLEPS-GIVVDRSVGFGIISACVNLG 382
+ D E+ L N KG A+ IE K P G D +I+ G
Sbjct: 544 RKDCPPN---EITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQG 600
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
D A ++L M+ C Y TLK C+ R EA ++V ++
Sbjct: 601 RLDDALNLLSTMS---CKPDAISYNSTLKGLCRAERWKEAEEIVAEM 644
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 62/343 (18%), Positives = 129/343 (37%), Gaps = 31/343 (9%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKIVELESLMNEF--GFSS 289
L+ + E + + ++G P+ +A +K L ++ + E +++ S+
Sbjct: 83 LRRLVQLEDLDAALRLVGSMPSSEPPAVIACNILIKKLCAHRRLADAERVLDALKESGSA 142
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE----TYCEVVKGFLQNGN 345
V +++L++GY + G L A R +E + S TY ++ G+ ++G
Sbjct: 143 DAVSHNTLVAGYCRDGRLADAERV---------LEAAKVSGAANVVTYTALINGYCRSGR 193
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
+ NLI + D ++ +KA +++EM C
Sbjct: 194 LADALNLIASMP------VAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVT 247
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
+ ++++C+ A QL+ + G DV Y L+ A L M
Sbjct: 248 FATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTM- 306
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD--WNSIIHAFCKAG 523
Y + GL R + + + E+V R + ++ ++ + C+ G
Sbjct: 307 --LCKPNTVCYNAALKGLCMAERWKDVGELIAEMV---RKDCPPNEATFSMLTSCLCQHG 361
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
++ A + +M P+ Y +LIN + + LM+
Sbjct: 362 LVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALML 404
>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
Length = 595
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 156/361 (43%), Gaps = 41/361 (11%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNES 257
+VFEE L N++ P+I N G C GL V + +++ M+ G+ PN
Sbjct: 161 QVFEE----MLKANIE---PDIVTYNILASGFCKSGL--VMEVFDLLDRMADQGLEPNSL 211
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
++G + G + L +++ E G V YSS++ GY+ G + A +
Sbjct: 212 TYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRV 271
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGII 375
GN+ FS +++ + GNV+G +N+ I+ + P I + +I
Sbjct: 272 ARQGNL-VDHFSCS---KLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSK-----LI 322
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
S G DKAH +M G S+ + VY + YCK R EA QL + +++ G++
Sbjct: 323 SIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIK 382
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
DV Y L++ + Q + ++ R S+L L NH L +
Sbjct: 383 PDVIAYTVLLDGHLKETLQQGWEGIAKERR---------SFL-----LRANHNKLLSS-- 426
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++D ++E + +I CKA L +A+ M+ P+ Y +LINGY
Sbjct: 427 ----MKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYC 482
Query: 556 T 556
+
Sbjct: 483 S 483
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 129/292 (44%), Gaps = 12/292 (4%)
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
Y G + V+L + M G + + Y+ LI+GY G +++A + L N+E
Sbjct: 115 YCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKA-NIEP 173
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
TY + GF ++G V + +L+ + Q LEP+ + + G I+ C L
Sbjct: 174 DIV---TYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSL----TYGIAIVGFCRGGNL 226
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
S+ A + + + G +Y + Y T A L + ++ G +D +
Sbjct: 227 SE-AEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSK 285
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI + Q A ++ + M E + SY +++ +N + + ++V+
Sbjct: 286 LINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRG 345
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+ + + +++ +CKAGRL++A + +M L +P+ Y L++G++
Sbjct: 346 -LSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHL 396
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 127/337 (37%), Gaps = 62/337 (18%)
Query: 262 LAYLYALKGL--QEKIVELESLMN---EFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
+AY + GL + ++ E E L+ G + + YS LI Y K+GNL A
Sbjct: 1 MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60
Query: 317 CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGII 375
+ G ET C +V LQ G+ + +I K + SG+ +D+ +
Sbjct: 61 MVSHG--------IETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVI----- 107
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
Y + YCK EA +L+ ++ GL
Sbjct: 108 ------------------------------YNIAMDTYCKNGNMNEAVKLLNEMKCGGLT 137
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
D +Y LI + Q+A +F +M +A I +Y + +G ++ +
Sbjct: 138 PDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDL 197
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
LD + D +E + + I FC+ G L +A+ + + + Y S++ GY+
Sbjct: 198 LDRMA-DQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYL 256
Query: 556 TAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAF 592
+ M++ + R + NLVD F
Sbjct: 257 LSGWTDHAYMLFVRVAR------------QGNLVDHF 281
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 163/393 (41%), Gaps = 49/393 (12%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLM- 282
N L+G C G + + +++ M LG P+ S+ L + + E+ +EL +M
Sbjct: 137 NQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMA 196
Query: 283 NEFGFSS--QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
N+ G S +V Y+++I G K + A + G +D TY ++ G+
Sbjct: 197 NDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNND----TYNCLIHGY 252
Query: 341 LQNGNVKGLANLI--IEAQKLEP---------------------------SGIVVDRSVG 371
L G K + ++ + A+ L+P +G+ D +
Sbjct: 253 LSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIF 312
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
SA G+ DKA I ++M G S + Y + A CK R +A + +
Sbjct: 313 NIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMIN 372
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL------ME 485
G+ ++ +++L+ T ++ A L +M + I + T++ L ME
Sbjct: 373 EGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVME 432
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
R L +++E V + +I +C AGR ++A++ M+ + P +
Sbjct: 433 GRR-------LIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEV 485
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
TY +L++GY +A + ++ E+ RK T G
Sbjct: 486 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPG 518
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 142/339 (41%), Gaps = 18/339 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP+ Y + L C ++S+ ++ M G+ P+ F YA G+ +K
Sbjct: 273 LKPDCYTYGSLLNYLC----ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKA 328
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+++ + M + G S +V Y +LI KLG ++ A + G + +
Sbjct: 329 MDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTP----NIVVFNS 384
Query: 336 VVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+V G + L+ E Q + P+ + + +I N+G + ++D
Sbjct: 385 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNT-----LICNLCNVGRVMEGRRLIDL 439
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G Y P + YC RT EA ++ + S GL Y+ L+ ++
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 499
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDW 512
A+ LFR+M + +Y TI+ GL + R E +L+ + + ++ T +
Sbjct: 500 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYT--Y 557
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
N I++ CK+ +++A + + + + N T+ +I
Sbjct: 558 NIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMI 596
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 90/231 (38%), Gaps = 9/231 (3%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V + ++I+ M +GVRP+ S+ L Y L G ++ ++ M G S V Y++
Sbjct: 430 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNT 489
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQS-DFSKETYCEVVKGFLQNGNVKGLANLIIE 355
L+ GY ++ A CL + + TY ++ G Q L +
Sbjct: 490 LLHGYCSASRIDDA-----YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYL- 543
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
+ SG D I++ D+A + + + G + + + + A K
Sbjct: 544 --NMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLK 601
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
R +A L I ++GL +V Y + E I + SLF M +
Sbjct: 602 GGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEK 652
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 27/339 (7%)
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
K++ V+ +P +G L YA G + M + Y+SLI Y
Sbjct: 4 KIVNAFQVID-KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAY 62
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKL 359
+ ++E A L G ++ +C ++ G+ GN + + +A+ L
Sbjct: 63 AEARDMEGAVACTEEMLSQG----IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENL 118
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
P GIV + I+ A G + ++L +M G LG+Y L + +
Sbjct: 119 VPGGIVYN-----SIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDE 173
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
+ + + GL Y +++ + + A + +M + + K Y I
Sbjct: 174 EKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMI 233
Query: 480 MTGLMENHRPELMAAFLDEVVED-------PRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
M G + AAF +V ED P + + +N ++HAFCKAGR++ A L
Sbjct: 234 MDGYARG--GDFTAAF--KVWEDMVSAGLKPDIVI----YNILVHAFCKAGRMDKALGVL 285
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+ + P +TY S+++GYV L ++ IK
Sbjct: 286 ENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIK 324
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 158/397 (39%), Gaps = 26/397 (6%)
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
G LVD ++ + VA FE +KPN++ + + + D E
Sbjct: 21 GLLVDFYARHGDKVAARATFEAM-------RASHIKPNVHIYTSLI----HAYAEARDME 69
Query: 242 KVI---ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+ E M G++ NE+ F + YA G E + Y+S++
Sbjct: 70 GAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIV 129
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEA 356
Y + GN+E+ + ME+ F Y V+ GF + ++ +
Sbjct: 130 QAYCQAGNMETVEALL------AQMEEEGFQGNLGLYTTVLNGFAE---IRDEEKCLSFF 180
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+L+ G+ + I+ G KA IL+EM+ G S +Y + Y +
Sbjct: 181 HRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARG 240
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
A ++ D+ S+GL+ D+ Y+ L+ A + A + ++ R+ +Y
Sbjct: 241 GDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETY 300
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+I+ G ++ + D + + + +NS++ KA ++E+A+ L M+
Sbjct: 301 TSILDGYVKGGNIQKALEVFDRI-KTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEML 359
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
PN+++Y +L GY A M+ +K++
Sbjct: 360 ANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKE 396
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 167/401 (41%), Gaps = 49/401 (12%)
Query: 233 GLQSVSDAEKVI---ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
G + D EK + + G+ P +++G + L+ G K +++ M++ G S
Sbjct: 166 GFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSP 225
Query: 290 QMVFYSSLISGYVKLGNLESASRT-----------------ILL---CLGG------GNM 323
+ Y+ ++ GY + G+ +A + IL+ C G G +
Sbjct: 226 NKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVL 285
Query: 324 EQSDFSK-----ETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIIS 376
E + ++ ETY ++ G+++ GN++ + I+ L P G+V S+ G+
Sbjct: 286 ENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRP-GVVSYNSLLSGLAK 344
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
A + A +L+EM A G Y + Y + +A + + L +
Sbjct: 345 A----RQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAI 400
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
D+ Y AL++A S Q A +F+ + +A + + +Y T++ G L
Sbjct: 401 DIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLL 460
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+++ + + T + S I A ++G E+ TL M + E N +TY +LI+G++
Sbjct: 461 NDM-QKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLA 519
Query: 557 AEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALV 597
A + + + K G++ + L + L L+
Sbjct: 520 AADPDQAISCYEQAK-------ASGLQLDSALSNCLLSGLI 553
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 131/315 (41%), Gaps = 15/315 (4%)
Query: 176 PFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ 235
P ++ ++D + +F A KV+E+ L KP+I N + C +
Sbjct: 225 PNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGL-------KPDIVIYNILVHAFCKAGR 277
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+ A V+E + + P ++ + Y G +K +E+ + G +V Y+
Sbjct: 278 -MDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYN 336
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
SL+SG K +E+A + L G + ++ +Y + +G+ + G+V+ +
Sbjct: 337 SLLSGLAKARQMENARLMLNEMLANGVVP----NERSYTALTEGYARAGDVEKAFGMF-- 390
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
Q+++ + +D ++ AC G +A + ++ G Y L + +
Sbjct: 391 -QRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWAR 449
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
+ ++A L+ D+ G LD Y + I+A S D + MRE ++ +
Sbjct: 450 KGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNART 509
Query: 476 YLTIMTGLMENHRPE 490
Y T++ G + P+
Sbjct: 510 YTTLIHGWLAAADPD 524
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 118/310 (38%), Gaps = 16/310 (5%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D + L+ + A A +++ + NR E + L D K N L+V
Sbjct: 261 DIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSIL-DGYVKGGNIQKALEV 319
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
F+ L +P + + N+ L G Q + +A ++ M GV PNE S+
Sbjct: 320 FDRIKTAGL-------RPGVVSYNSLLSGLAKARQ-MENARLMLNEMLANGVVPNERSYT 371
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L YA G EK + M + + +V Y +L+ K G ++ A+
Sbjct: 372 ALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDA 431
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
G ++ TYC ++ G+ + G + +L+ + QK G +D I AC
Sbjct: 432 G----LKHNRITYCTMLDGWARKGELSKARDLLNDMQK---HGFHLDTICYTSFIKACFR 484
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G +++ L M V Y + + +A +SGLQLD
Sbjct: 485 SGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSAL 544
Query: 441 YDALIEASIT 450
+ L+ I+
Sbjct: 545 SNCLLSGLIS 554
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 159/362 (43%), Gaps = 21/362 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ +ACN + C G + DA +++E M++ G P+ ++ + + V
Sbjct: 263 PDFWACNIYVHYLC-GHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVG 321
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNL----ESASRTILLCLGGGNMEQSDFSKETY 333
L M G +V +LI G K + E ASR + L + Y
Sbjct: 322 LWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTL--------DIQLNVSIY 373
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ GF + G+++ + Q+ EP VV ++ +++ ++G++DKA +++
Sbjct: 374 NALISGFWRAGSIEKAYKTVSFMQRNGCEPD--VVTYNI---LLNHYCSIGMTDKAENLI 428
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+M G + Y LK CK H+ +A V D G D+ + + LI+A +
Sbjct: 429 RKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRA 488
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ SA +LF++M I +Y ++ GL L D+++ + ++ +
Sbjct: 489 KKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQML-NTKIVPNVNV 547
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N ++H CK G + A++ +M + P+ T+ +LI + + L ++ E++
Sbjct: 548 YNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMR 607
Query: 572 RK 573
K
Sbjct: 608 TK 609
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 125/319 (39%), Gaps = 37/319 (11%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ AC A + G C Q V +A ++ M L ++ N S + L + G EK
Sbjct: 331 LKPDVVACGALIFGLCKN-QKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKA 389
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLG-----------------NLESASRTILL-- 316
+ S M G +V Y+ L++ Y +G N + S ILL
Sbjct: 390 YKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKG 449
Query: 317 -----------CLGGGNMEQSDFSKETYCEV-VKGFLQNGNVKGLANLIIEAQKLEPSGI 364
+ME F C + + F + V NL +++ GI
Sbjct: 450 LCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLF---KEMGYKGI 506
Query: 365 VVDRSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
D +V +GI I+ +G S+ A + D+M + VY L CK A
Sbjct: 507 QAD-AVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQ 565
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
++ ++ + D ++ LI S A LF++MR + ++ I++GL
Sbjct: 566 KIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGL 625
Query: 484 MENHRPELMAAFLDEVVED 502
++ + L + ++E+
Sbjct: 626 LDEGKATLAYEIWEYMMEN 644
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 159/362 (43%), Gaps = 21/362 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ +ACN + C G + DA +++E M++ G P+ ++ + + V
Sbjct: 263 PDFWACNIYVHYLC-GHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVG 321
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNL----ESASRTILLCLGGGNMEQSDFSKETY 333
L M G +V +LI G K + E ASR + L + Y
Sbjct: 322 LWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTL--------DIQLNVSIY 373
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ GF + G+++ + Q+ EP VV ++ +++ ++G++DKA +++
Sbjct: 374 NALISGFWRAGSIEKAYKTVSFMQRNGCEPD--VVTYNI---LLNHYCSIGMTDKAENLI 428
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+M G + Y LK CK H+ +A V D G D+ + + LI+A +
Sbjct: 429 RKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRA 488
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ SA +LF++M I +Y ++ GL L D+++ + ++ +
Sbjct: 489 KKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQML-NTKIVPNVNV 547
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N ++H CK G + A++ +M + P+ T+ +LI + + L ++ E++
Sbjct: 548 YNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMR 607
Query: 572 RK 573
K
Sbjct: 608 TK 609
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 125/319 (39%), Gaps = 37/319 (11%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ AC A + G C Q V +A ++ M L ++ N S + L + G EK
Sbjct: 331 LKPDVVACGALIFGLCKN-QKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKA 389
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLG-----------------NLESASRTILL-- 316
+ S M G +V Y+ L++ Y +G N + S ILL
Sbjct: 390 YKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKG 449
Query: 317 -----------CLGGGNMEQSDFSKETYCEV-VKGFLQNGNVKGLANLIIEAQKLEPSGI 364
+ME F C + + F + V NL +++ GI
Sbjct: 450 LCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLF---KEMGYKGI 506
Query: 365 VVDRSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
D +V +GI I+ +G S+ A + D+M + VY L CK A
Sbjct: 507 QAD-AVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQ 565
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
++ ++ + D ++ LI S A LF++MR + ++ I++GL
Sbjct: 566 KIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGL 625
Query: 484 MENHRPELMAAFLDEVVED 502
++ + L + ++E+
Sbjct: 626 LDEGKATLAYEIWEYMMEN 644
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 143/362 (39%), Gaps = 46/362 (12%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN 283
NA + C ++ A + + M G RP+ +F L Y + +L M
Sbjct: 15 NAVIRSLCR-RADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN 343
GF+ +V Y++LI G+ + G ++ A G M+Q D Y +VKG +
Sbjct: 74 LRGFAQDVVSYAALIEGFCETGRIDEAVELF------GEMDQPDM--HMYAALVKGLCKA 125
Query: 344 GNVKGLANLIIEAQKLE----PSGIVVDRSVGF--------------------------- 372
G +G L++ + E PS V F
Sbjct: 126 G--RGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVV 183
Query: 373 ---GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
+I+A G A +L+ M GC + Y ++ +C E + +A L+ +
Sbjct: 184 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKM 243
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
G+ D Y+ LI +SAF L R M + + +Y ++ L ++ R
Sbjct: 244 RVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 303
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+ + D +E ++ +NS+I+ CK+G+++ A + L +M+ P+ TY S
Sbjct: 304 DQACSLFDS-LETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSS 362
Query: 550 LI 551
I
Sbjct: 363 FI 364
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 143/342 (41%), Gaps = 13/342 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P + C A + C +SDA +V+E M + G +PN ++ L + +G K
Sbjct: 178 LAPCVVTCTAVINAYCKE-GRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 236
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L + M G + V Y+ LI G G++ESA R + L G G + + TY
Sbjct: 237 MALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIAD----QYTYNA 292
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ ++G +L +E + ++P+ + + +I+ G D A L++
Sbjct: 293 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFN-----SLINGLCKSGKVDIAWKFLEK 347
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + GC+ Y ++ CK + E + ++ ++ NY +I + ++
Sbjct: 348 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 407
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ + +M + +Y T M R L E+ ++ V V T +N
Sbjct: 408 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG-VTVDTMAYN 466
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+++ G+ + A L++M + PN TY L+ V
Sbjct: 467 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV 508
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 169/430 (39%), Gaps = 96/430 (22%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN++ NA ++G C V A ++ M V GV P+ ++ L + G E
Sbjct: 214 KPNVWTYNALVQGFC-NEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAF 272
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------SRTIL------------L 316
L LM G + Y++LI+ K G + A +R I L
Sbjct: 273 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 332
Query: 317 CLGGG---------NMEQSDFSKETYCEVVKGFLQN-----GNVKGLANLIIEAQK-LEP 361
C G M + + +TY F+++ G+ +GL+ + QK ++P
Sbjct: 333 CKSGKVDIAWKFLEKMVSAGCTPDTY--TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 390
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
S V+ ++ + N GL + EM + GC+ + Y +++AYC E R E
Sbjct: 391 S--TVNYTIVIHKLLKERNYGLVARTWG---EMVSSGCNPDVVTYTTSMRAYCIEGRLNE 445
Query: 422 ATQLVMDISSSGLQLDVGNYDALIE---------------------ASITSQ-------- 452
A ++M++S +G+ +D Y+ L++ AS+ +Q
Sbjct: 446 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 505
Query: 453 -----------------------DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+ F LF M++ G+Y +I+ G E+ R
Sbjct: 506 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 565
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
E + + + ED + + + +++ FCK+ R DA + MI F P+ +Y
Sbjct: 566 EEATSLVSLMKEDS-ISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQH 624
Query: 550 LINGYVTAEQ 559
L++G + Q
Sbjct: 625 LLSGLICEGQ 634
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 159/403 (39%), Gaps = 63/403 (15%)
Query: 175 MPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFM----KPNIYACNAALEGC 230
MP GF D+ ++ A ++ F E RI DE ++ +P+++ A ++G
Sbjct: 72 MPLR---GFAQDVV----SYAALIEGFCETGRI--DEAVELFGEMDQPDMHMYAALVKGL 122
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GF 287
C + + ++ M LG RP+ ++ A + + + K E E ++ E G
Sbjct: 123 CKAGRG-EEGLLMLRRMKELGWRPSTRAY---AAVVDFRCWERKAKEAEEMLQEMFEKGL 178
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK 347
+ +V +++I+ Y K G + A R + L + + TY +V+GF G V
Sbjct: 179 APCVVTCTAVINAYCKEGRMSDALRVLELM----KLRGCKPNVWTYNALVQGFCNEGKVH 234
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
KA ++L++M CG + Y
Sbjct: 235 --------------------------------------KAMALLNKMRVCGVNPDAVTYN 256
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
++ C + A +L+ + GL D Y+ALI A A SLF +
Sbjct: 257 LLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR 316
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
I ++ +++ GL ++ + ++ FL+++V T+ ++S I CK ++
Sbjct: 317 GIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVS-AGCTPDTYTYSSFIEHLCKMKGSQE 375
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+ M+ +P+ Y +I+ + Y V W E+
Sbjct: 376 GLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 418
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D A + D+M G + + Y ++ +C+ R EA +L ++ Q D+ Y AL
Sbjct: 63 DVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAAL 118
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED-- 502
++ + + + R M+E +Y ++ + + L E+ E
Sbjct: 119 VKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGL 178
Query: 503 -PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
P V T ++I+A+CK GR+ DA R L M +PN TY +L+ G+ +
Sbjct: 179 APCVVTCT----AVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 234
Query: 562 SVLMMWHEIK 571
+ + ++++
Sbjct: 235 KAMALLNKMR 244
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
G Y L+ + ++ RT EAT LV + + L+ Y AL+ S+ + A+ L
Sbjct: 550 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCS 609
Query: 464 MREARIYDLKGSYLTIMTGLM-ENHRPELMAAFLDEVVED--PRVEVKTHDWNSIIHAFC 520
M + SY +++GL+ E + F++ +D P V W II
Sbjct: 610 MIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIV----WKVIIDGLI 665
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
K G + ++ + + + P+ QTY L
Sbjct: 666 KKGHSDISREMIIMLERMNCRPSHQTYAML 695
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/502 (21%), Positives = 208/502 (41%), Gaps = 36/502 (7%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTV 145
EA K + N+ P N L+A H+ A + P + + TV
Sbjct: 361 EALNILKEMEDNNCEPDAITYNELVAAYVR-AGFHDEGAAVIDTMASKGVMPNAITYTTV 419
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF--EE 203
G +A+ A F +K EL G + ++C N+ V K E+
Sbjct: 420 INAYGKAGDADKALEVFGQMK-----------EL--GCVPNVCTYNNVLVLLGKRSRSED 466
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
+I D L+ P+ N L C G Q +V+ M G P++ +F L
Sbjct: 467 MIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKF--VSQVLREMKNCGFEPDKETFNTL 524
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
Y G + + ++ M GF+ + Y++L++ + GN ++A +L +
Sbjct: 525 ISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVL------D 578
Query: 323 MEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISAC 378
M + F ++ +Y ++ + + GNV+GL + +E + PS +++ V C
Sbjct: 579 MRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNY--KC 636
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
L ++A ++ G + + V L + + + +A +++ I SGLQ ++
Sbjct: 637 RQLKGMERA---FHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNL 693
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
Y++LI+ D A + +D++ + I SY T++ G + + L E
Sbjct: 694 VTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSE 753
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+ + V+ +N+ + + G +A +R MI PN+ TY +I+GY+ A+
Sbjct: 754 MTANG-VQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAK 812
Query: 559 QYFSVLMMWHEIKR-KISTDGQ 579
++ + +IK IS D Q
Sbjct: 813 KHKEAMDFVSKIKEIDISFDDQ 834
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 127/313 (40%), Gaps = 19/313 (6%)
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+ YA G ++ +E+ M E G +V Y+ ++ Y K+G S +L + +
Sbjct: 245 HAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGL 304
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK----LEPSGIVVDRSVGFGIISACV 379
E +F+ T G ++ EA++ L+ +G + ++
Sbjct: 305 EFDEFTCTTVISAC----------GREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFG 354
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
G+ +A +IL EM C Y + AY + E ++ ++S G+ +
Sbjct: 355 KAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAI 414
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y +I A + D A +F M+E +Y ++ L + R E M L ++
Sbjct: 415 TYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDM 474
Query: 500 VED--PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ P + WN+++ + G+ + + LR M FEP+ +T+ +LI+ Y
Sbjct: 475 KLNGCPPDRIT---WNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRC 531
Query: 558 EQYFSVLMMWHEI 570
V M+ E+
Sbjct: 532 GSEVDVAKMYGEM 544
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 158/379 (41%), Gaps = 30/379 (7%)
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN 343
E+GF ++ +Y+ LI+ + K G++ A + I + + + S T ++ G ++
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDA-KLIFNEIRKRGLRPTTVSFNT---LINGLCKS 271
Query: 344 GNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
N+ L +E ++ P V SV +I G D A + DEM G
Sbjct: 272 RNLDEGFRLKKTMEENRIYPD--VFTYSV---LIHGLCKEGRLDVAEQLFDEMQQRGLRP 326
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ + C+ R A + + G++ D+ Y+ L+ D A L
Sbjct: 327 NGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLV 386
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
+MR + K +Y T++ G + E A + + + + V + + ++I FC+
Sbjct: 387 DEMRMVGMKPDKITYTTLIDGYCKEGDLE-SAMEIRKGMNEEGVVLDNVAFTALISGFCR 445
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKG 581
GR+ DA+RTLR M+ +P+D TY +I+GY + M ++ +++ +G K
Sbjct: 446 DGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGN----VKMGFKLLKEMQINGHKP 501
Query: 582 IKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLR 641
+N++ + L K G ++E + V D Y +E H K
Sbjct: 502 GVITYNVL---MNGLCKQGQMKNANMLLEAMLNLGVTPDDITY-NILLEGHCK------- 550
Query: 642 KRNFKKMEALIAFKNWAGL 660
K E L+ +N GL
Sbjct: 551 ---NGKAEDLLKLRNEKGL 566
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 140/338 (41%), Gaps = 16/338 (4%)
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAY-LYALKGLQEKIVELESLMNEFGFSSQMVFY 294
S+ DA+ + + G+RP SF L L + L E L+ M E + Y
Sbjct: 238 SIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGF-RLKKTMEENRIYPDVFTY 296
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANL 352
S LI G K G L+ A + M+Q T+ ++ G ++ + N
Sbjct: 297 SVLIHGLCKEGRLDVAEQLF------DEMQQRGLRPNGITFTALIDGQCRSRRIDSAMN- 349
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
++ G+ D + +++ +G +KA ++DEM G Y +
Sbjct: 350 --TYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDG 407
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
YCKE A ++ ++ G+ LD + ALI + A R+M EA +
Sbjct: 408 YCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPD 467
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
+Y ++ G + ++ L E+ + + V T +N +++ CK G++++A
Sbjct: 468 DATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVIT--YNVLMNGLCKQGQMKNANML 525
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
L M+ L P+D TY L+ G+ + +L + +E
Sbjct: 526 LEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 145/336 (43%), Gaps = 41/336 (12%)
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKN----- 191
P + F T+ L RN + F L K M +NR + + + +C++
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEG---FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVA 312
Query: 192 -------------SNFVAFLKVFEECCRIA-LDENLDF--------MKPNIYACNAALEG 229
N + F + + CR +D ++ +KP++ N L G
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNG 372
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
C + V+ A K+++ M ++G++P++ ++ L Y +G E +E+ MNE G
Sbjct: 373 LC-KVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVL 431
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
V +++LISG+ + G + A RT+ + G M+ D TY V+ G+ + GNVK
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAG-MKPDD---ATYTMVIDGYCKKGNVKMG 487
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
L+ E Q V+ +V +++ G A+ +L+ M G + Y
Sbjct: 488 FKLLKEMQINGHKPGVITYNV---LMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNIL 544
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
L+ +CK + + +L + GL +D Y +L+
Sbjct: 545 LEGHCKNGKAEDLLKLR---NEKGLIVDYAYYTSLV 577
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP + N + G C Q + +A ++E M LGV P++ ++ L + G E ++
Sbjct: 500 KPGVITYNVLMNGLCKQGQ-MKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 558
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVK 303
+L NE G +Y+SL+S Y K
Sbjct: 559 KLR---NEKGLIVDYAYYTSLVSEYNK 582
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 167/392 (42%), Gaps = 23/392 (5%)
Query: 193 NFVAFLKVFEECCRIA--LDENLDF-------MKPNIYACNAALEGCCYGLQSVSDAEKV 243
N AF KV C+ L+ L M N++ N + G C + +A ++
Sbjct: 188 NLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEA-GRLPEAVRL 246
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGL-QEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
++ M V P+ ++ L K + QE + L +MN+ G Y+++I GY
Sbjct: 247 VDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ-GCLPDDFTYNTIIDGYC 304
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
K+ ++ A+ + + G + + TYC ++ G G+V+ L EAQ
Sbjct: 305 KISMVQEATELLKDAVFKGFVP----DQVTYCSLINGLCAEGDVERALELFNEAQA---K 357
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
GI D V ++ GL A +++EM GC + Y + CK ++A
Sbjct: 358 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 417
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
T ++ D G DV ++ LI+ SA L M E I +Y +++ G
Sbjct: 418 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 477
Query: 483 LMENHRP-ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
L + + E+ F + +++ T +N +I FC++ ++E+A + + +M
Sbjct: 478 LCKAGKVNEVNETFQEMILKGCHPNPIT--YNILIENFCRSNKMEEASKVIVKMSQEGLH 535
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
P+ ++ +LI G+ +++ +++ K
Sbjct: 536 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 567
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/339 (19%), Positives = 143/339 (42%), Gaps = 11/339 (3%)
Query: 233 GLQSVSDAEKVIETMS---VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
GL + D E+ +E + G++P+ + L L+GL +++ + M E G
Sbjct: 337 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 396
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
+ Y+ +I+G K+GN+ A+ + + M+ T+ ++ G+ + +
Sbjct: 397 DIQTYNIVINGLCKMGNISDAT----VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 452
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
L+ +++ GI D +++ G ++ + EM GC Y
Sbjct: 453 LQLV---ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 509
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ +C+ ++ EA+++++ +S GL D +++ LI + D + A+ LF+ + E
Sbjct: 510 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 569
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
++ T++ + DE++ ++ + +I CK ++ A
Sbjct: 570 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH-RADSYTYRVLIDGSCKTANVDRAY 628
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
L MI F P+ T+ +IN + F + + H
Sbjct: 629 MHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 667
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 9/243 (3%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G + A + D+M L + L A CK EA L+ + G+ +++ Y
Sbjct: 168 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTY 227
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ I + A L MR + D+ +Y T++ GL + P+ +L ++
Sbjct: 228 NIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVV-TYNTLIRGLCKKSMPQEAMHYLRRMMN 286
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
+ +N+II +CK +++A L+ +F F P+ TY SLING
Sbjct: 287 QGCLP-DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 345
Query: 562 SVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
L +++E + KGIK + + ++ + L G +QV+ + E D
Sbjct: 346 RALELFNEAQ-------AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDI 398
Query: 622 WKY 624
Y
Sbjct: 399 QTY 401
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 94/240 (39%), Gaps = 25/240 (10%)
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+ +A L M GC Y + YCK EAT+L+ D G D Y
Sbjct: 273 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 332
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
+LI D + A LF + + I Y +++ GL ++E+ E+
Sbjct: 333 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 392
Query: 503 ---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
P ++ +N +I+ CK G + DA + I + P+ T+ +LI+GY +
Sbjct: 393 GCHPDIQT----YNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 448
Query: 560 YFSVLM----MWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEM 615
S L MW + GI + ++ L L K G V +V E QEM
Sbjct: 449 LDSALQLVERMW-----------EYGIAPDTITYNSVLNGLCKAG---KVNEVNETFQEM 494
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
I+ A V+ D+AH + M A G S L + L+++C R A +L+ +
Sbjct: 93 AIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR 152
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G Y ++ A LF M ++ ++ ++ L + R +++
Sbjct: 153 G----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCK--RGDVL 206
Query: 493 AA--FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
A L +V++ + + +N I C+AGRL +A R + M P+ TY +L
Sbjct: 207 EAGLLLGKVIQRG-MSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTL 264
Query: 551 ING 553
I G
Sbjct: 265 IRG 267
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 140/338 (41%), Gaps = 46/338 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+I ++ L G C+G + +SDA +++ M +G RP+ +F L + L + V
Sbjct: 114 EPSIVTLSSLLNGYCHG-KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 172
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L M + G +V Y +++G K G+ + A
Sbjct: 173 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA-------------------------- 206
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
NL+ K+E + I D + II + D A ++ EM
Sbjct: 207 -------------LNLL---NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 250
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + Y + C R ++A+QL+ D+ + ++ ++ALI+A + F
Sbjct: 251 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 310
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV-EDPRVEVKTHDWNSI 515
A L+ DM + I +Y +++ G + R + + +V +D +V T +N++
Sbjct: 311 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT--YNTL 368
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
I FCK+ R+ED R M + TY +LI G
Sbjct: 369 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 406
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 190/475 (40%), Gaps = 65/475 (13%)
Query: 110 IAHLSSLQDNHNLKRAFASVVYVIEKNPKL---LDFQTVHTLLGSMRNANTAAPAFALVK 166
I LSSL + + + + V ++++ ++ D T TL+ + N A+ A ALV
Sbjct: 117 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 176
Query: 167 CMFKNRYFMPFELWGGFLVD-ICRKNSNFVAF-LKVFEECCRIALDENLDFMKPNIYACN 224
M + R P + G +V+ +C++ +A L E +I D + N
Sbjct: 177 RMVQ-RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD---------VVIFN 226
Query: 225 AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE 284
++ C + V DA + + M G+RPN ++ L G +L S M E
Sbjct: 227 TIIDSLC-KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 285
Query: 285 FGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS-DFSKETYCEVVKGFLQN 343
+ +V +++LI +VK G A + L +++S D TY +V GF +
Sbjct: 286 KKINPNLVTFNALIDAFVKEGKFVEAEK-----LYDDMIKRSIDPDIFTYNSLVNGFCMH 340
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
+ DKA + + M + C +
Sbjct: 341 DRL--------------------------------------DKAKQMFEFMVSKDCFPDV 362
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y +K +CK R + T+L ++S GL D Y LI+ D +A +F+
Sbjct: 363 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 422
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M + +Y ++ GL N + E D ++ +++ + + ++I CKAG
Sbjct: 423 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQKSEIKLDIYIYTTMIEGMCKAG 481
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
+++D + +PN TY ++I+G + +L + + +K+ DG
Sbjct: 482 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR----LLQEAYALLKKMKEDG 532
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 125/316 (39%), Gaps = 22/316 (6%)
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
L+D K FV K++++ + ++D P+I+ N+ + G C + A+++
Sbjct: 298 LIDAFVKEGKFVEAEKLYDDMIKRSID-------PDIFTYNSLVNGFCMH-DRLDKAKQM 349
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
E M P+ ++ L + E EL M+ G V Y++LI G
Sbjct: 350 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 409
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
G+ ++A + + G D TY ++ G NG ++ + QK E
Sbjct: 410 DGDCDNAQKVFKQMVSDG--VPPDIM--TYSILLDGLCNNGKLEKALEVFDYMQKSE--- 462
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
I +D + +I G D + ++ G + Y + C + EA
Sbjct: 463 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 522
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
L+ + G + G Y+ LI A + D ++ L R+MR R G TI GL
Sbjct: 523 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV---GDASTI--GL 577
Query: 484 MEN--HRPELMAAFLD 497
+ N H L +FLD
Sbjct: 578 VANMLHDGRLDKSFLD 593
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 160/392 (40%), Gaps = 26/392 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ N+ ++G C + V +E+V+E M G+RPN ++ L Y Y+ G+ ++
Sbjct: 188 VSPDVVTYNSLIDGLCKTKEMVK-SERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKES 246
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI-LLCLGGGNMEQSDFSKETYC 334
V + M+ G +V +S I + ++ A + L G +S +
Sbjct: 247 VRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHG 306
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+G N N L NL++ GIV + +I+A G+ DKA I ++M
Sbjct: 307 YAAEGCFANMN--SLVNLMVS------KGIVPNHRFFNILINAYARCGMMDKAMLIFEDM 358
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + + + C+ R +A + G+ Y LI+ +
Sbjct: 359 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGEL 418
Query: 455 QSAFSLFRDMREARIYDLKGSYLT-IMTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDW 512
A L +M I Y + I+ L + R +D +V+ R V T +
Sbjct: 419 VKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVT--F 476
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
NS++ +C G +E+A L M + EPN Y +L++GY + L ++ ++
Sbjct: 477 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML- 535
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGFFDA 604
KG+K + LY ++ G F A
Sbjct: 536 ------HKGVK-----PTSVLYNIILHGLFQA 556
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 104/508 (20%), Positives = 196/508 (38%), Gaps = 47/508 (9%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYV-IEKNPKLLDF 142
D+A++ F + S+ P NSLI L ++ +R +V I N K
Sbjct: 173 VDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNK---- 228
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE 202
T ++L+ A + + K M + F+ +CR N +
Sbjct: 229 -TYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNR--------IK 279
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSV-SDAEKVIETMSVLGVRPNESSFGF 261
E I L KPNI + + L G Y + ++ ++ M G+ PN F
Sbjct: 280 EAKDIFDSMVLKGPKPNIISYSTLLHG--YAAEGCFANMNSLVNLMVSKGIVPNHRFFNI 337
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA----------- 310
L YA G+ +K + + M G V ++++IS ++G L+ A
Sbjct: 338 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 397
Query: 311 ---SRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLI---IEAQKLEPS 362
S + CL G + +KE E++ + VK +++I + ++
Sbjct: 398 VPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEG 457
Query: 363 GIVVDRSVGFG----------IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
++D V G ++ +G ++A ++LD M + G +Y +
Sbjct: 458 KDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 517
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
YCK R +A + D+ G++ Y+ ++ ++ +A +F +M E+
Sbjct: 518 YCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVS 577
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+Y ++ GL N+ + L+++ V+ +N +I A K GR ++AK
Sbjct: 578 IQTYGVVLGGLCRNNCTDEANMLLEKLFA-MNVKFDIITFNIVISAMLKVGRRQEAKELF 636
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+ P TY +I+ + E Y
Sbjct: 637 AAISTYGLVPTVHTYNLMISNLIKEESY 664
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 7/225 (3%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V++ + +++ M G RPN +F L Y L G E+ L M G Y +
Sbjct: 454 VAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 513
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
L+ GY K G ++ A L G S Y ++ G Q + E
Sbjct: 514 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL----YNIILHGLFQARRTTAAKKMFHEM 569
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+E V ++ G + C N +D+A+ +L+++ A + + + A K
Sbjct: 570 --IESGTTVSIQTYGVVLGGLCRN-NCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKV 626
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
R EA +L IS+ GL V Y+ +I I + ++ A +LF
Sbjct: 627 GRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLF 671
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 43/243 (17%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G DKA+ + +M S + Y + CK ++ +++ + +G++ + Y
Sbjct: 171 GEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTY 230
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
++LI T+ ++ + +F++M +GL+
Sbjct: 231 NSLIYGYSTAGMWKESVRVFKEMSS--------------SGLI----------------- 259
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
P V + NS IHA C+ R+++AK M+ +PN +Y +L++GY AE F
Sbjct: 260 -PCVV----NCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGY-AAEGCF 313
Query: 562 SVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
+ + ++ KGI H + + A + G D M + E Q + D
Sbjct: 314 A------NMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 367
Query: 622 WKY 624
+
Sbjct: 368 VTF 370
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 43/189 (22%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ Y + HR A + + +GL DV +Y+ LI+ + A+ LF M E +
Sbjct: 129 IDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSV 188
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
P+++ +NS+I CK + ++
Sbjct: 189 ------------------SPDVVT------------------YNSLIDGLCKTKEMVKSE 212
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
R L +M+ PN++TY SLI GY TA MW E R G+
Sbjct: 213 RVLEQMVDAGIRPNNKTYNSLIYGYSTAG-------MWKESVRVFKEMSSSGLIPCVVNC 265
Query: 590 DAFLYALVK 598
++F++AL +
Sbjct: 266 NSFIHALCR 274
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 144/354 (40%), Gaps = 28/354 (7%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + P + ++G C +A ++ E M G+ P+E ++ L G E
Sbjct: 526 DGITPGVITYTTLIQGQCKK-HEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAE 584
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
E S + + G V Y+SL+ G+ K GN E A+ I + G S TY
Sbjct: 585 ---EAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADS----HTY 637
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+++ + + +++ + G +V ++ IIS + G D A S+ +E
Sbjct: 638 SVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTI---IISEMIKEGKHDHAKSMFNE 694
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + G Y + +YCK R EA L+ ++ +G+ DV Y+ I
Sbjct: 695 MISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGY 754
Query: 454 FQSAFSLFRDMREARI----------------YDLKGSYLTIMTGLMENHRPELMAAFLD 497
AFS + M +A L ++ +G+ + + + L+
Sbjct: 755 MDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLE 814
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+V+ + ++SII FCKA RLE+A L M+ PN++ Y LI
Sbjct: 815 RMVKHG-LNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLI 867
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 166/410 (40%), Gaps = 79/410 (19%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL------------- 262
M+ + Y CNA L G C + A ++ M ++G R NE S+ L
Sbjct: 214 MEMDTYTCNALLLGYCR-TGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREA 272
Query: 263 -----------------AYLYALKGL--QEKIVELESLMNEF---GFSSQMVFYSSLISG 300
Y ++GL + +I + L++E G + Y+++I G
Sbjct: 273 LVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDG 332
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF----------LQNGNV-KGL 349
Y K G L+ A L G G D+ TY ++ G L NG + +G
Sbjct: 333 YCKSGRLKDALGIKTLMEGNG-CNPDDW---TYNSLIHGLCGGKPDEAEELLNGAIARGF 388
Query: 350 ANLII----------EAQKLEPS----GIVVDRSV-----GFGI-ISACVNLGLSDKAHS 389
+ +I +A+K++ + I++ +G+ IS + +A
Sbjct: 389 SPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKD 448
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
L+E+ A G S + +Y + AYCK + A ++ G + + Y +LI I
Sbjct: 449 TLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLI 508
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVK 508
Q A +L M+E I +Y T++ G + H E AF L E++E +
Sbjct: 509 QDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH--EFDNAFRLFEMMEQNGLTPD 566
Query: 509 THDWNSIIHAFCKAGRLEDAKRTL-RRMIFLQFEPNDQTYLSLINGYVTA 557
+N + A CK+GR E+A L ++ + L TY SL++G+ A
Sbjct: 567 EQAYNVLTDALCKSGRAEEAYSFLVKKGVVL----TKVTYTSLVDGFSKA 612
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 145/339 (42%), Gaps = 14/339 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++Y N + C+ L + A V+ + LG +P+ ++F L ++G
Sbjct: 100 IPPDVYTLNILINSFCH-LNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDA 158
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ L M GF +V Y +LI+G K+GN +A R + +MEQ + + Y
Sbjct: 159 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLL------RSMEQGNCQPDVVVY 212
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ ++ V NL K+ GI D +I + NL ++L++
Sbjct: 213 TSIIDSLCKDRQVTEAFNLF---SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQ 269
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + ++ + A CKE + EA +V + G++ +V Y+AL++ +
Sbjct: 270 MINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSE 329
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A +F M SY T++ G + R + +E+ + + T +N
Sbjct: 330 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP-NTVTYN 388
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+++H C GRL+DA M+ P+ TY L++
Sbjct: 389 TLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLD 426
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/330 (19%), Positives = 141/330 (42%), Gaps = 16/330 (4%)
Query: 249 VLGVRPNESSFGFLAYLYALKGLQE--KIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
+L + P S+ F L ++ ++ + L + M+ FG + + LI+ + L
Sbjct: 60 MLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNR 119
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGI 364
L A + L G+ Q D + T+ +++G G + +L + + +P+
Sbjct: 120 LGFAFSVLAKILKLGH--QPDTA--TFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPN-- 173
Query: 365 VVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
V +G +I+ +G ++ A +L M C + VY + + CK+ + EA
Sbjct: 174 ----VVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
L + G+ D+ Y +LI + +++ +L M ++I + T++ L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+ + +D ++ VE +N+++ C +++A + M+ + PN
Sbjct: 290 CKEGKITEAHDVVDMMIIR-GVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 348
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+Y +LINGY ++ ++ E+ +K
Sbjct: 349 VISYNTLINGYCKIQRMDKATYLFEEMCQK 378
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 103/250 (41%), Gaps = 8/250 (3%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+++A V++ M + GV PN ++ L + L+ ++ V++ M G++ ++ Y++
Sbjct: 295 ITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT 354
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
LI+GY K+ ++ A+ M Q + T + +V L + I
Sbjct: 355 LINGYCKIQRMDKATYLF------EEMCQKELIPNTV--TYNTLMHXCHVGRLQDAIALF 406
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
++ G + D + ++ D+A ++L + + +Y + C+
Sbjct: 407 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 466
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
A + ++SS GL+ +V Y +I A LF +M +Y
Sbjct: 467 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 526
Query: 477 LTIMTGLMEN 486
TI GL++N
Sbjct: 527 NTITQGLLQN 536
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 93/229 (40%), Gaps = 9/229 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ + N + G C +Q + A + E M + PN ++ L + + LQ+ I
Sbjct: 347 PNVISYNTLINGYC-KIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIAL 405
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
++ G + Y L+ K +L+ A +L + G NM D + Y V+
Sbjct: 406 FHEMVAH-GQIPDLATYRILLDYLCKKSHLDEA-MALLKTIEGSNM---DPDIQIYTIVI 460
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + G ++ ++ L G+ + +I+ GL D+A+ + EM+
Sbjct: 461 DGMCRAGELEAARDIF---SNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGN 517
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
GCS Y + + A QL+ ++ + G DV L+E
Sbjct: 518 GCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 566
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 177/441 (40%), Gaps = 43/441 (9%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF-GFLAYLYALKGLQEK 274
+ PN+ N + G C + V A ++ M G P++ +F F+ L + +++
Sbjct: 431 LSPNLVTYNTLIHGLCKA-RVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQA 489
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
ESL + +++ + Y++LI GY K A L G S T+
Sbjct: 490 HQVFESLKEKHAEANEFL-YTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSI----TFN 544
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G + G V+ +L+ K + V ++ +I + D+A+ LD+M
Sbjct: 545 VLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTI---LIEEILRESDFDRANMFLDQM 601
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ GC + Y +KAYC++ R EA ++V+ I G+ LD YD L+ A
Sbjct: 602 ISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQL 661
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLM-ENHRPELMAAFLDEV---VEDPRVEVKTH 510
SAF + M + + +Y ++ L+ E + E M L+ V++ +
Sbjct: 662 DSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANI----- 716
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
W K E +M+ PN TY LI G E +++ +
Sbjct: 717 -W--------KIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHM 767
Query: 571 KRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFME 630
K + GI N+ ++ L + K G + +++++ E A +E
Sbjct: 768 K-------ESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYN--------HLAHLE 812
Query: 631 NHKKLKVAKLRKRNFKKMEAL 651
++K L + N +K E +
Sbjct: 813 SYKLLVCGLFEQGNQEKAEEI 833
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 129/305 (42%), Gaps = 14/305 (4%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESL---MNEFGFSSQMVFYSSLISGYVKLGNL 307
GV PN SF + + G +V ++ + +FGF Y+SLI GY K+ L
Sbjct: 185 GVEPNLISFNTMVNAHCKIG---NVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHEL 241
Query: 308 ESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A + + G + ++ +Y ++ GF + G + L + ++ G D
Sbjct: 242 GDAYKVFEIMPQEGCLR----NEVSYTNLIHGFCEVGKIDEALELFFQMKE---DGCFPD 294
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+++A +G +A +EM G + Y + +CK + E +++
Sbjct: 295 VPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLS 354
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ GL V ++ALI+ + A + M+ ++ +Y ++ G
Sbjct: 355 TMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKK 414
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+ A L+++ E+ ++ +N++IH CKA ++ A R MI F P+ +T+
Sbjct: 415 SMDRAMALLNKMYEN-KLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTF 473
Query: 548 LSLIN 552
+ I+
Sbjct: 474 CAFID 478
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 2/181 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
I+ C L D A+ + + M GC Y + +C+ + EA +L + G
Sbjct: 232 ILGYCKIHELGD-AYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDG 290
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
DV Y L+ A A F +M E I +Y ++ + + +
Sbjct: 291 CFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGM 350
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
L ++E V +N++I +CK G +EDA L M + PN +TY LI G
Sbjct: 351 EMLSTMLEKGLVS-SVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICG 409
Query: 554 Y 554
+
Sbjct: 410 F 410
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 159/364 (43%), Gaps = 29/364 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N+ + C Q++ A +V+ TM GV P+ ++ + + Y G ++ +
Sbjct: 229 PDVVTYNSIIAALCKA-QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 287
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
M G +V YS L+ K G A + +M + E TY
Sbjct: 288 FLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF------DSMTKRGLKPEITTYGT 341
Query: 336 VVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+++G+ G + GL +L++ +GI D V +I A N G D+A +
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVR------NGIHPDHYVFSILICAYANQGKVDQAMLVFS 395
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M G + Y + CK R +A + GL Y++LI T
Sbjct: 396 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 455
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIM--TGLMENHRPELMAAFLDEVVE-DPRVEVKT 509
++ A L +M + +G L + ++++H E +++ E R+ VK
Sbjct: 456 KWERAEELILEMLD------RGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 510 H--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+ +N++I+ +C AG++++A + L M+ + +PN TY +LINGY + L+++
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569
Query: 568 HEIK 571
E++
Sbjct: 570 KEME 573
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/491 (20%), Positives = 195/491 (39%), Gaps = 31/491 (6%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
++ S T ++ ++D+A+ ++ + + P NS+IA L Q
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
++V KN + D T +++L ++ A +K M ++ P + L+D
Sbjct: 255 NTMV----KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMD 309
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDAEKVIE 245
KN + K+F+ + L KP I L+G Y + ++ + +++
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGL-------KPEITTYGTLLQG--YATKGALVEMHGLLD 360
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M G+ P+ F L YA +G ++ + + S M + G + V Y ++I K G
Sbjct: 361 LMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Query: 306 NLESA----SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
+E A + I L GN+ Y ++ G + LI+E +
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNI--------VYNSLIHGLCTCNKWERAEELILE---MLD 469
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
GI ++ II + G ++ + + M G + Y + YC + E
Sbjct: 470 RGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDE 529
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A +L+ + S GL+ + Y LI + A LF++M + + +Y I+
Sbjct: 530 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
GL + R + E +++ +N I+H CK +DA + + + + +
Sbjct: 590 GLFQTRRTAAAKELYVRITESG-TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Query: 542 PNDQTYLSLIN 552
+T+ +I+
Sbjct: 649 LEARTFNIMID 659
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 100/534 (18%), Positives = 201/534 (37%), Gaps = 70/534 (13%)
Query: 82 NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLD 141
N + EA + + + S P S ++ + +A+++ ++++ L D
Sbjct: 172 NRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGI-LPD 230
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNS--NFVAFLK 199
T ++++ ++ A A ++ M KN + L C + FLK
Sbjct: 231 VVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK 290
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
D ++P++ + ++ C + + +A K+ ++M+ G++P +++
Sbjct: 291 KMRS----------DGVEPDVVTYSLLMDYLCKNGRCM-EARKIFDSMTKRGLKPEITTY 339
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
G L YA KG ++ L LM G +S LI Y G ++ A +L
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQA----MLVFS 395
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA---QKLEPSGIVVDRSVGFGIIS 376
+ + + TY V+ ++G V+ A L E + L P IV + +I
Sbjct: 396 KMRQQGLNPNAVTYGAVIGILCKSGRVED-AMLYFEQMIDEGLSPGNIVYN-----SLIH 449
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
++A ++ EM G + + + ++CKE R E+ +L + G++
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
+V Y+ LI + A L M + GL N
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGM--------------VSVGLKPN---------- 545
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
T ++++I+ +CK R+EDA + M P+ TY ++ G
Sbjct: 546 ------------TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Query: 557 AEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
+ + ++ I + G + E + + L+ L K D +Q+ +
Sbjct: 594 TRRTAAAKELYVRIT-------ESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 640
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 45/354 (12%)
Query: 227 LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL------QEKIVELES 280
L+G C ++ + V+ M+ LG PN S+ L LKGL QE + L
Sbjct: 129 LKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNIL-----LKGLCDENRSQEALELLHM 183
Query: 281 LMNEFGFSS--QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV- 337
+ ++ G S +V Y+++I+G+ K G+ SD + TY E++
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGD-------------------SDKAYSTYHEMLD 224
Query: 338 KGFLQN-GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL----------GLSDK 386
+G L + + + +AQ ++ + V++ V G++ C+ G +
Sbjct: 225 RGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 284
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A L +M + G + Y + CK R EA ++ ++ GL+ ++ Y L++
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQ 344
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
T L M I+ +I+ N A + + +
Sbjct: 345 GYATKGALVEMHGLLDLMVRNGIHP-DHYVFSILICAYANQGKVDQAMLVFSKMRQQGLN 403
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+ ++I CK+GR+EDA +MI P + Y SLI+G T ++
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 11/232 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V ++EK+ E M +GV+PN ++ L Y L G ++ ++L S M G V YS+
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
LI+GY K+ +E A +L ME S S + TY +++G Q L +
Sbjct: 552 LINGYCKISRMEDA--LVLF----KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 605
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
++ SG ++ S I+ L+D A + + + + + A
Sbjct: 606 ---RITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
K R EA L + SS+GL + Y + E I + LF M +
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 168/417 (40%), Gaps = 63/417 (15%)
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GF 287
CY Q D +V E + ++ E++ G L I ++E+L NE
Sbjct: 221 CYVRQK--DDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNV 278
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK 347
+ Y+++I+ Y + GN+ A++ + C+G G + ++ TY ++ GF + G ++
Sbjct: 279 VGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNG----VEPNERTYGVLINGFCKIGQME 334
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
L+ + Q G+ +++ + +I G+ D A I M G + + Y
Sbjct: 335 AAEMLLADMQG---QGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYN 391
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
C+ +R EA L+ + G+ + Y LI D A LFR+M E
Sbjct: 392 TLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAE- 450
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
KG+ +++T +N +I + K G + +
Sbjct: 451 -----KGATPSVVT------------------------------YNVMIDGYTKKGSIRE 475
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN 587
A+R + M F P+ TY SL++G+ + L ++ E+K Q+G E N
Sbjct: 476 AERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMK-------QRGT--EPN 526
Query: 588 LV--DAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYK----QAFMENHKKLKVA 638
+V A + L K G +A Q+ + + + D Y +N K +KV+
Sbjct: 527 VVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDVKVS 583
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 107/242 (44%), Gaps = 8/242 (3%)
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
L+D A + + +C SV + CK R +A +L+ D+ G+ L+ Y+
Sbjct: 157 LADAAGLLERALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYN 216
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
+L++ + +D + M I G+Y ++ L + A +E+ +
Sbjct: 217 SLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKAN 276
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
V + + ++I+A+C+AG + A + L + EPN++TY LING+ Q +
Sbjct: 277 -NVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEA 335
Query: 563 VLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKW 622
M+ +++ GQ G+ + + + + G D +++ ++M V +D +
Sbjct: 336 AEMLLADMQ------GQ-GVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIY 388
Query: 623 KY 624
Y
Sbjct: 389 TY 390
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 114/282 (40%), Gaps = 20/282 (7%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++Y A + C ++ A KV++ GV PNE ++G L + G E L
Sbjct: 281 DVYLYTAVINAYCRA-GNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEML 339
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEV 336
+ M G + ++++I GY + G ++ A + ME+ + TY +
Sbjct: 340 LADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKI------KAAMEKMGVELDIYTYNTL 393
Query: 337 VKGFLQNGNV---KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
G + + K L +++IE G+V + +IS G +A + E
Sbjct: 394 ACGLCRVNRLDEAKTLLHIMIEM------GVVPNYVTYTTLISIHCKDGDMVEARRLFRE 447
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G + + Y + Y K+ EA + ++ G DV Y +L+ +
Sbjct: 448 MAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGK 507
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
A LF +M++ +Y +++GL + R E AAF
Sbjct: 508 VDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSE--AAF 547
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 85/229 (37%), Gaps = 47/229 (20%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
+IY N G C + + +A+ ++ M +GV PN ++ L ++ G + L
Sbjct: 386 DIYTYNTLACGLCR-VNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRL 444
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEV 336
M E G + +V Y+ +I GY K G++ A R ME+ F + TY +
Sbjct: 445 FREMAEKGATPSVVTYNVMIDGYTKKGSIREAERF------RKEMEKKGFVPDVYTYASL 498
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V G NG V D A + +EM
Sbjct: 499 VHGHCVNGKV--------------------------------------DVALKLFEEMKQ 520
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
G + Y + KE R+ A QL D+ +GL D Y AL+
Sbjct: 521 RGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 569
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 148/345 (42%), Gaps = 58/345 (16%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ NA ++G C + DA + M G P++ ++ L +Y L G EK E
Sbjct: 228 PSVWTYNAMIDGYCKS-GRMKDALGIKALMERNGCNPDDWTYNIL--IYGLCG--EKPDE 282
Query: 278 LESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
E L+N+ GF+ ++ ++++I+GY K ++ A R
Sbjct: 283 AEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALR---------------------- 320
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
VK + + N K L+ G++++ +I C +A + EM
Sbjct: 321 --VKTSMLSSNCK---------LDLQAYGVLINV-----LIKKC----RFKEAKETVSEM 360
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
A G + + +Y + YCK + A ++ + G + + Y +LI I Q
Sbjct: 361 FANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKL 420
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWN 513
A +L M+E I +Y T++ G + H E AF L E++E + +N
Sbjct: 421 HKAMALITKMQEDGITPGVITYTTLIQGQCKKH--EFDNAFRLFEMMEQNGLTPDEQAYN 478
Query: 514 SIIHAFCKAGRLEDAKRTL-RRMIFLQFEPNDQTYLSLINGYVTA 557
+ HA CK+GR E+A L R+ + L TY SL++G+ A
Sbjct: 479 VLTHALCKSGRAEEAYSFLVRKGVVL----TKVTYTSLVDGFSKA 519
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 151/362 (41%), Gaps = 20/362 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ + ++G C + V A +V M G RPN ++ L Y K
Sbjct: 365 LAPNVVIYTSIIDGYC-KVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKA 423
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS--KETY 333
+ L + M E G + ++ Y++LI G K ++A R + MEQ+ + ++ Y
Sbjct: 424 MALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEM------MEQNGLTPDEQAY 477
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+ ++G + + ++ G+V+ + ++ G +D A ++++
Sbjct: 478 NVLTHALCKSGRAEEAYSFLVR------KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEK 531
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M GC Y L+A CK+ + EA ++ ++ SG++ ++ Y +I I
Sbjct: 532 MVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGK 591
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A S+F +M + +Y ++ + + E + E+ D V +N
Sbjct: 592 HDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG-VAPDVVTYN 650
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY----VTAEQYFSVLMMWHE 569
I+ G ++ A TL+RMI EPN TY L+ + + Y MW+
Sbjct: 651 VFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNW 710
Query: 570 IK 571
I+
Sbjct: 711 IE 712
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 2/155 (1%)
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GCS+ L Y +K CKE R A +++ ++ G+ V Y+A+I+ S + A
Sbjct: 190 GCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDA 249
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+ M +Y ++ GL E D +V V T + +II+
Sbjct: 250 LGIKALMERNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVIT--FTNIIN 307
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+CKA R++DA R M+ + + Q Y LIN
Sbjct: 308 GYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLIN 342
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 140/352 (39%), Gaps = 63/352 (17%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFG-FSSQMVFYSSLISGYVKLGNLESAS 311
RPN ++ + + +G + +E+ M E G + Y++LISG+ K+G +E A+
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAA 203
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
+ L G + S Y ++ G+ G L + Q E +V R V
Sbjct: 204 KVFDEMLTQGEVAPSAV---MYNALIGGYCDRGK------LDVALQYRED---MVQRGVA 251
Query: 372 FGI------ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+ + A G + A+++L+EM G S + Y + YCKE +A ++
Sbjct: 252 MTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEV 311
Query: 426 VMDIS-----------------------------------SSGLQLDVGNYDALIEASIT 450
++S G++ DV Y+ALI +
Sbjct: 312 FEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCA 371
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
D + AF + +M + RI +Y T++ G R + +DE+ T
Sbjct: 372 GGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEM---------TK 422
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
CK G+ +DA+ ++ M+ P+D TY+SLI G T ++ S
Sbjct: 423 RGIQPDLGLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGLTTVDEQMS 474
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 133/339 (39%), Gaps = 19/339 (5%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
RP+ +S F A L +L + + L L++ + ++ + + L
Sbjct: 62 AARPHATSLRFYAQLKSLS-VPIPVASLHPLLSSLPSAPAFALFADIYRLRLPLCTTTFN 120
Query: 311 SRTILLCLGGGNMEQSDFSKE-------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
LC G + + ++ TY V+ GF G V+ ++ E + E G
Sbjct: 121 IMLRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMR--ERGG 178
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV-YVPTLKAYCKEHRTAEA 422
I D+ +IS +G + A + DEM G V Y + YC + A
Sbjct: 179 IAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVA 238
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
Q D+ G+ + V Y+ L+ A A+++ +M+ + +Y ++ G
Sbjct: 239 LQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILING 298
Query: 483 LM-ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
E + + + F E + V + S+I+AF + G++++ R + +
Sbjct: 299 YCKEGNEKKALEVF--EEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIR 356
Query: 542 PNDQTYLSLINGYVTA---EQYFSVLMMWHEIKRKISTD 577
P+ Y +LIN + E+ F + M K++I D
Sbjct: 357 PDVVMYNALINSHCAGGDMERAFEI--MAEMEKKRIPPD 393
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 21/223 (9%)
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
SDA V+E M G+ P+ ++ L Y +G ++K +E+ M+ G + V Y+SL
Sbjct: 271 SDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSL 330
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
I + + G ++ R + + G + D Y ++ G+++ ++ E +
Sbjct: 331 IYAFSRKGQVQETDRLFKVAVKKGI--RPDVV--MYNALINSHCAGGDMERAFEIMAEME 386
Query: 358 K--LEPSGIVVDRSV-GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
K + P + + + GF C+ LG D+A ++DEM G LG+ C
Sbjct: 387 KKRIPPDDVTYNTLIRGF-----CL-LGRLDEARGLIDEMTKRGIQPDLGL--------C 432
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
K + +A L+ ++ G+ D Y +LIE T + SA
Sbjct: 433 KNGQGDDAENLMKEMVGKGITPDDSTYISLIEGLTTVDEQMSA 475
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 91/258 (35%), Gaps = 53/258 (20%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE-AR 468
L+ C + A +L+ + + Y+ +I Q+A + R+MRE
Sbjct: 123 LRHLCATGKPVRALELLRQMPRP----NAVTYNTVIAGFCARGRVQAALEVMREMRERGG 178
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE-- 526
I K +Y T+++G + R E A DE++ V +N++I +C G+L+
Sbjct: 179 IAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVA 238
Query: 527 ---------------------------------DAKRTLRRMIFLQFEPNDQTYLSLING 553
DA L M P+ TY LING
Sbjct: 239 LQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILING 298
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
Y L ++ E+ R KG++ + +YA + G QV E +
Sbjct: 299 YCKEGNEKKALEVFEEMSR-------KGVRATAVTYTSLIYAFSRKG------QVQETDR 345
Query: 614 EMKVFVDKWKYKQAFMEN 631
KV V K M N
Sbjct: 346 LFKVAVKKGIRPDVVMYN 363
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 7/195 (3%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
E M GV +++ L + + G + M G S + Y+ LI+GY K
Sbjct: 243 EDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKE 302
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
GN + A L + + + TY ++ F + G V+ L A K GI
Sbjct: 303 GNEKKA----LEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVK---KGI 355
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
D + +I++ G ++A I+ EM Y ++ +C R EA
Sbjct: 356 RPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARG 415
Query: 425 LVMDISSSGLQLDVG 439
L+ +++ G+Q D+G
Sbjct: 416 LIDEMTKRGIQPDLG 430
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 118/549 (21%), Positives = 216/549 (39%), Gaps = 46/549 (8%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVH 146
A +F +T L P VT + + H ++D + F ++ P ++ F T
Sbjct: 133 ALSTFGKITKLGLHPDV-VTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTT-- 189
Query: 147 TLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD-ICRKNSNFVAF--LKVFEE 203
L+ + A AL+ M ++ P ++ G +VD +C+K A L+ EE
Sbjct: 190 -LMNGLCREGRIVEAVALLDRMMEDG-LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
I PN+ +A ++ C + SDA+ + M G+ P+ ++ +
Sbjct: 248 VSHII---------PNVVIYSAIIDSLCKDGRH-SDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+ G +L M E S +V Y++LI+ +VK G A+ L G +
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 357
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ TY ++ GF + + ++ + G D +I
Sbjct: 358 PNT----ITYNSMIDGFCKQDRLDAAEDMF---YLMATKGCSPDVFTFTTLIDGYCGAKR 410
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
D +L EM G Y + +C A L + SSG+ D+ +
Sbjct: 411 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 470
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGS------------YLTIMTGLMENHRPEL 491
L++ + + A +F+ M+++++ DL S Y ++ GL+ N L
Sbjct: 471 LLDGLCDNGKLKDALEMFKAMQKSKM-DLDASHPFNGVEPDVLTYNILICGLI-NEGKFL 528
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
A L E + + T ++S+I CK RL++A + M F PN T+ +LI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 588
Query: 552 NGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
NGY A + L ++ E+ G++GI + + +Y K G + + + ++
Sbjct: 589 NGYCKAGRVDDGLELFCEM-------GRRGIVADAIIYITLIYGFRKVGNINGALDIFQE 641
Query: 612 SQEMKVFVD 620
V+ D
Sbjct: 642 MISSGVYPD 650
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 113/295 (38%), Gaps = 23/295 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ ++G C G + + D +++ M G+ N ++ L + + L G ++
Sbjct: 393 PDVFTFTTLIDGYC-GAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD 451
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA---------SRTILLCLGGGNMEQSDF 328
L M G +V ++L+ G G L+ A S+ L N + D
Sbjct: 452 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDV 511
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLS 384
TY ++ G + G +EA++L GIV D +I
Sbjct: 512 L--TYNILICGLINEGK-------FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A + M + S + + + YCK R + +L ++ G+ D Y L
Sbjct: 563 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 622
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
I + A +F++M + +Y + ++TG E A L+++
Sbjct: 623 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A LF DM +R + +M ++ RP+L+ + L + +E ++ + +N
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVIS-LYQKMERKQIRCDIYSFN 118
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+I FC +L A T ++ L P+ T+ +L++G ++ L +H++
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 185/463 (39%), Gaps = 42/463 (9%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
DEA K + +T L P NS I+ L R F + E + T
Sbjct: 236 DEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVT 295
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
+ +L A +LV+ M K F+ E + +L+ + R K+ E
Sbjct: 296 FNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNG-------KLLEG- 347
Query: 205 CRIALDENLD-FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
R LDE ++ ++PNIY+ N ++G C + DA ++++ M GV P+ ++ L
Sbjct: 348 -RSVLDEMVENGIEPNIYSYNIVMDGLCRN-HMMLDARRLMDLMVSNGVYPDTVTYTTLL 405
Query: 264 YLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLG--------------- 305
+ Y KG K+ E ++++NE G ++L++ K G
Sbjct: 406 HGYCSKG---KVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEK 462
Query: 306 --NLESASRTIL---LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
L++ + I+ LC G + S+ E + + + V GL N I
Sbjct: 463 SYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNV 522
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
P I +I+ +G ++A EM A Y + +CK+ + +
Sbjct: 523 PDVITYTT-----LINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKIS 577
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
A +++ D+ +G + Y++LI + + L +MRE I+ +Y ++
Sbjct: 578 SALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMI 637
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
L E + + + L E+++ V + +I AFCK+G
Sbjct: 638 NCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSG 680
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLE----PSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+V+GF + G K Q LE G V+R V ++S+ ++D+A ++
Sbjct: 192 LVRGFCRAGRTK---------QALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLV 242
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG-LQL---DVGNYDALIEA 447
+ M G + + + A C+ + EA+++ D+ G L L +V ++ +++
Sbjct: 243 ERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKG 302
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ A SL M++ + SY T + GL+ N + + LDE+VE+ +E
Sbjct: 303 FCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENG-IEP 361
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+ +N ++ C+ + DA+R + M+ P+ TY +L++GY + + F +
Sbjct: 362 NIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAIL 421
Query: 568 HEIKRK 573
+E+ RK
Sbjct: 422 NEMIRK 427
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 108/526 (20%), Positives = 210/526 (39%), Gaps = 71/526 (13%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHL--SSLQDN--HNLKRAFASVVYVIEKNPKLL 140
D A+ FKSL + FPS P+ L L SSLQ N H + + ++ NP+
Sbjct: 96 DFAFSHFKSLRTH--FPSTPLPLQLYHLLLRSSLQQNRPHYVTSLYTDMIQT-GVNPETY 152
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLV-DICRK--------- 190
F + L+ S+ +N A L M + P + G LV CR
Sbjct: 153 TF---NLLIQSLCESNALDHARELFDKM-SEKGCQPNKFTVGILVRGFCRAGRTKQALEF 208
Query: 191 -------NSNFVAFLKVFEECCRIALDENLD---------FMKPNIYACNAALEGCCYGL 234
N N V + + C+ +++ + + P++ N+ + C
Sbjct: 209 VDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRA- 267
Query: 235 QSVSDAEKVIETMSVLG----VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
V +A ++ M + G +PN +F + + +G+ E+ L M + G
Sbjct: 268 GKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVS 327
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
+ Y++ + G ++ G L R++L + +E + +S Y V+ G +N
Sbjct: 328 LESYNTWLLGLLRNGKLLEG-RSVLDEMVENGIEPNIYS---YNIVMDGLCRN------- 376
Query: 351 NLIIEAQKLE----PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
+++++A++L +G+ D ++ + G +A +IL+EM GC
Sbjct: 377 HMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTC 436
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
L + KE R +EA +++ ++ QLD + ++ + + + A + +M
Sbjct: 437 NTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWT 496
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
L EN L+ + + P V + ++I+ CK G+LE
Sbjct: 497 DGTNSLG----------KENPVAGLVNSIHNVSTNVPDVIT----YTTLINGLCKVGKLE 542
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+AK+ M+ P+ TY + + + + S L + +++R
Sbjct: 543 EAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMER 588
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 101/507 (19%), Positives = 180/507 (35%), Gaps = 116/507 (22%)
Query: 81 TNNTDEAWKSFKSL-----------------TANSLFPSKPVTNSLIAHLSSLQDNHNLK 123
TNN AW FK + + L P+ +T L+ H + NH +
Sbjct: 16 TNNPKLAWHLFKRILSSSPSSSSSSSSSSSSHHHHLIPT--ITRILLRHNMDNEINHLFQ 73
Query: 124 -----RAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALV------KCMFKNR 172
+ S++ ++ ++P LDF H S+R + P + + +NR
Sbjct: 74 LTTSHHSHISILNILSQSPHHLDFAFSH--FKSLRTHFPSTPLPLQLYHLLLRSSLQQNR 131
Query: 173 YFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCY 232
L+ D+ + N P Y N ++ C
Sbjct: 132 PHYVTSLY----TDMIQTGVN------------------------PETYTFNLLIQSLCE 163
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV 292
++ A ++ + MS G +PN+ + G L + G ++ LE + + G + V
Sbjct: 164 S-NALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQ--ALEFVDGKMGGNVNRV 220
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL 352
Y++L+S + K + A + +
Sbjct: 221 VYNTLVSSFCKQDMNDEAEKLV-------------------------------------- 242
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT--- 409
+++ G++ D ISA G +A I +M G LG+ P
Sbjct: 243 ----ERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDG---ELGLPKPNVVT 295
Query: 410 ----LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
LK +C+E EA LV + G + + +Y+ + + + S+ +M
Sbjct: 296 FNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMV 355
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
E I SY +M GL NH +D +V + V T + +++H +C G++
Sbjct: 356 ENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNG-VYPDTVTYTTLLHGYCSKGKV 414
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+AK L MI PN T +L+N
Sbjct: 415 FEAKAILNEMIRKGCHPNTYTCNTLLN 441
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 142/319 (44%), Gaps = 13/319 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ + + + C + +V + V M V G RPN +F L + ++G
Sbjct: 275 VDPNVISYSTVI-SCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDA 333
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
V L +LM G S +V Y++LI G GN++ A ME+ TY
Sbjct: 334 VGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISV------WNQMEKDSIRPNVTTY 387
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ GF ++G+ L + K+ G + V ++ + + D+A ++D
Sbjct: 388 STIIYGFAKSGD---LVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDN 444
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + GC + + +K C+ R A ++ + ++ Y+ L++ +
Sbjct: 445 MISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANA 504
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
F+ A L R++ E ++ +Y TIM G N + + L +++ + +++ T N
Sbjct: 505 FREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNG-IKLDTITVN 563
Query: 514 SIIHAFCKAGRLEDAKRTL 532
+ ++A+CK G+++ A + L
Sbjct: 564 TTVNAYCKLGKVKTAIKVL 582
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 134/328 (40%), Gaps = 13/328 (3%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+++ M + V ++ F F+ Y L E+ +++ + EFG + Y+ ++ +
Sbjct: 96 LLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALL 155
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
NL + + +E + F TY ++K QNG V G L++E +
Sbjct: 156 S-QNLFKMINALYNNMKSEGLEPNVF---TYNVLLKALCQNGKVDGACKLLVE---MSNK 208
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G D +IS+ LG DKA + + + VY + CKE R EA
Sbjct: 209 GCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPV-----VPVYNALIHGVCKECRFKEA 263
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
L+ ++ G+ +V +Y +I + + + ++F M ++ +++ G
Sbjct: 264 FDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKG 323
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
R + ++ + V +N++IH C G +++A +M P
Sbjct: 324 FFVRGRVGDAVGLWNLMIREG-VSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRP 382
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEI 570
N TY ++I G+ + S W+++
Sbjct: 383 NVTTYSTIIYGFAKSGDLVSACETWNKM 410
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 165/429 (38%), Gaps = 87/429 (20%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN++ N L+ C V A K++ MS G P++ S+ + G +K
Sbjct: 175 LEPNVFTYNVLLKALCQN-GKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA 233
Query: 276 VELE---------------------------SLMNEF---GFSSQMVFYSSLISGYVKLG 305
EL LMNE G ++ YS++IS +G
Sbjct: 234 RELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMG 293
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK---GLANLIIEAQKLEPS 362
N+E + L G + + +T+ ++KGF G V GL NL+I + + P+
Sbjct: 294 NVELS----LAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIR-EGVSPN 348
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
+V ++ G+ S G D+A S+ ++M + Y + + K A
Sbjct: 349 -VVAYNTLIHGLCSD----GNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSA 403
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+ + + G + +V Y +++ F AF L +M I D G T++T
Sbjct: 404 CETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNM----ISD--GCPPTVIT- 456
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
+N+ I C+AGR+E A L +M + P
Sbjct: 457 -----------------------------FNNFIKGLCRAGRVEWAMNVLDQMEKYECLP 487
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFF 602
N +TY L++G A + + E++ ++ ++F+ + +Y G
Sbjct: 488 NIRTYNELLDGLFRANAFREACGLIRELE-------ERKVEFDCVTYNTIMYGFSFNGMH 540
Query: 603 DAVMQVVEK 611
V+Q++ K
Sbjct: 541 QQVLQLLGK 549
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 97/235 (41%), Gaps = 13/235 (5%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++ A ++ L +++ + M + G + Y LKA C+ + A +L++++S+ G
Sbjct: 150 VLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKG 209
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
D +Y +I + D A L + + Y ++ G+ + R +
Sbjct: 210 CDPDDVSYTTVISSMCKLGDVDKAREL-----AMKFEPVVPVYNALIHGVCKECRFKEAF 264
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
++E+V D V+ ++++I G +E + RM PN QT+ SLI G
Sbjct: 265 DLMNEMV-DRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKG 323
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQV 608
+ + + +W+ + R +G+ + ++ L G D + V
Sbjct: 324 FFVRGRVGDAVGLWNLMIR-------EGVSPNVVAYNTLIHGLCSDGNMDEAISV 371
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 138/372 (37%), Gaps = 67/372 (18%)
Query: 101 PSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEK--NPKLLDFQTVHTLLGSMRNANTA 158
P PV N+LI + K AF + ++++ +P ++ + TV + L M N +
Sbjct: 242 PVVPVYNALIHGVCK---ECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELS 298
Query: 159 APAFALVKCMFKNRYFMPFELWGGFLVDICRKN-SNFVAFLKVFEECCRIALDENL---- 213
F G V CR N F + +K F R+ L
Sbjct: 299 LAVF------------------GRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLM 340
Query: 214 --DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL 271
+ + PN+ A N + G C ++ +A V M +RPN +++ + Y +A G
Sbjct: 341 IREGVSPNVVAYNTLIHGLCSD-GNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGD 399
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
E + M G +V Y+ ++ ++ + A I + G +
Sbjct: 400 LVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDG----CPPTVI 455
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLE-----------------------PSGIVVD- 367
T+ +KG + G V+ N++ + +K E G++ +
Sbjct: 456 TFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIREL 515
Query: 368 --RSVGFGIISACVNL------GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
R V F ++ + G+ + +L +M G + T+ AYCK +
Sbjct: 516 EERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKV 575
Query: 420 AEATQLVMDISS 431
A +++ +IS+
Sbjct: 576 KTAIKVLDNISA 587
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/487 (20%), Positives = 191/487 (39%), Gaps = 33/487 (6%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
++ S T ++ + D+A+ ++ + + P+ +S+IA L Q
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
S+V KN + + +T ++++ ++ A +K M + + +
Sbjct: 258 TSMV----KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDAEKVIE 245
+C KN K+F+ + L KP I L+G Y + ++ + +++
Sbjct: 314 LC-KNGRCTEARKMFDSMTKRGL-------KPEITTYGTLLQG--YATKGALVEMHGLLD 363
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M G+ PN F L YA +G ++ + + S M + G + V Y ++I K G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423
Query: 306 NLESASR----TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
+E A R I L GN+ Y ++ LI+E +
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNI--------VYNSLIHSLCIFDKWDKAKELILE---MLD 472
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
GI +D II + G ++ + D M G + Y + YC + E
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
AT+L+ + S G++ D Y+ LI + A LFR+M + + +Y I+
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592
Query: 482 GLMENHRPELMAAFLDEVVED-PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL + R + E ++E+ T +N I+H CK ++A R + +
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELST--YNIILHGLCKNNLTDEALRMFQNLCLTDL 650
Query: 541 EPNDQTY 547
+ +T+
Sbjct: 651 QLETRTF 657
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/496 (19%), Positives = 192/496 (38%), Gaps = 72/496 (14%)
Query: 121 NLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELW 180
+L +A+ + ++++ L + T +++ ++ A A ++ M KN +
Sbjct: 214 DLDKAYGTYHEMLDRGI-LPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 181 GGFLVDICRKNS--NFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVS 238
+ C + FLK D ++P++ N+ ++ C + +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHS----------DGVEPDVVTYNSLMDYLCKNGR-CT 321
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+A K+ ++M+ G++P +++G L YA KG ++ L LM G +S LI
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEA 356
Y K G ++ A M Q + +T Y V+ ++G V+ +
Sbjct: 382 CAYAKQGKVDQAMLVF------SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 357 --QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
++L P IV + I S C+ DKA ++ EM G + + + ++C
Sbjct: 436 IDERLSPGNIVYNSL----IHSLCI-FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
KE R E+ +L + G++ D+ Y LI+ + A L M
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM---------- 540
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+ G+ +P+ + +N++I+ +CK R+EDA R
Sbjct: 541 ----VSVGM----KPDCVT------------------YNTLINGYCKISRMEDALVLFRE 574
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY 594
M P+ TY ++ G + + ++ I + G + E + + L+
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT-------ESGTQLELSTYNIILH 627
Query: 595 ALVKGGFFDAVMQVVE 610
L K D +++ +
Sbjct: 628 GLCKNNLTDEALRMFQ 643
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 109/277 (39%), Gaps = 31/277 (11%)
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL- 436
C + SD +L M GC + Y LK C E+R+ EA +L+ + G
Sbjct: 137 CADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP 196
Query: 437 -DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
DV +Y +I D A+ + +M + I +Y +I+ L + +
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEV 256
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI---- 551
L +V++ V +NSI+H +C +G+ ++A L++M EP+ TY SL+
Sbjct: 257 LTSMVKNG-VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315
Query: 552 -NGYVTAEQYFSVLMMWHEIKRKISTDG-----------------------QKGIKFEHN 587
NG T + M +K +I+T G + GI H
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 588 LVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ + A K G D M V K ++ + D Y
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 143/345 (41%), Gaps = 44/345 (12%)
Query: 227 LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-----QEKIVELESL 281
L+G C ++ + V+ M+ LG PN S+ L LKGL ++ +EL +
Sbjct: 133 LKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL-----LKGLCDENRSQEALELLQM 187
Query: 282 MNEFG--FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV-K 338
M + G +V Y+++I+G+ K G+L+ A TY E++ +
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKA-------------------YGTYHEMLDR 228
Query: 339 GFLQN-GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC----------VNLGLSDKA 387
G L N + + +AQ ++ + V+ V G++ C + G +A
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
L +M++ G + Y + CK R EA ++ ++ GL+ ++ Y L++
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
T L M I+ + ++ + + + A + + +
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD-QAMLVFSKMRQQGLNP 407
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
T + ++I CK+GR+EDA R +MI + P + Y SLI+
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 146/382 (38%), Gaps = 56/382 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF---GFLAYLYALKGL--- 271
PN+++ N L+G C D + E + +L + P++ ++Y + G
Sbjct: 160 PNVFSYNILLKGLC-------DENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 272 --QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
+K M + G +V YSS+I+ K ++ A + + G M
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC--- 269
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
TY +V G+ +G K + +K+ G+ D ++ G +A
Sbjct: 270 -RTYNSIVHGYCSSGQPKEAIGFL---KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ D M G + Y L+ Y + E L+ + +G+ + + LI A
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-------- 501
A +F MR+ + +Y T++ L ++ R E + +++++
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445
Query: 502 --------------------------DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
D + + T +NSII + CK GR+ ++++ M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505
Query: 536 IFLQFEPNDQTYLSLINGYVTA 557
+ + +P+ TY +LI+GY A
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLA 527
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 52/244 (21%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V ++EK+ + M +GV+P+ ++ L Y L G ++ +L + M G V Y++
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
LI+GY K+ +E A +L ME S S + TY +++G Q L +
Sbjct: 555 LINGYCKISRMEDA--LVLF----REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
GI + L LS Y L C
Sbjct: 609 ------------------GITESGTQLELS--------------------TYNIILHGLC 630
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT------SQDFQSAFSLFRDMREAR 468
K + T EA ++ ++ + LQL+ ++ +I A + ++D +A S + + R
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 469 IYDL 472
Y L
Sbjct: 691 TYSL 694
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 155/379 (40%), Gaps = 23/379 (6%)
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
LG +P+ + L LKG +K + + GF V Y +L++G K+G
Sbjct: 74 LGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRC 133
Query: 310 ASRTILLCLGGGNMEQSDFSKET---YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
A + + M + ++ Y ++ G ++ V +L E ++ GI
Sbjct: 134 AVKLL-------RMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSE---MDARGIFP 183
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D +I LG A S+LDEM + G+ +Y + A CKE EA L+
Sbjct: 184 DAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLL 243
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
++ G++ V Y L++ + Q+A +F M + + SY ++ GL +
Sbjct: 244 AVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKC 303
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND-Q 545
R + L E++ V T +NS+I CK+GR+ A + M + +P D
Sbjct: 304 KRVDEAMNLLREMLHKNMVP-DTVTYNSLIDGLCKSGRITSALNLMNEM-HHRGQPADVV 361
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAV 605
TY SL++ + ++ ++K ++GI+ A + L KGG
Sbjct: 362 TYTSLLDALCKNQNLDKATALFMKMK-------ERGIQPTMYTYTALIDGLCKGGRLKNA 414
Query: 606 MQVVEKSQEMKVFVDKWKY 624
++ + +D W Y
Sbjct: 415 QELFQHLLVKGCCIDVWTY 433
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 121/294 (41%), Gaps = 11/294 (3%)
Query: 209 LDEN-LDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
LDE L + P +Y N + C +V +A+ ++ M+ G++P ++ L Y
Sbjct: 208 LDEMILKNINPGVYIYNILINALCKE-GNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYC 266
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
L G + ++ M + G + + Y+ +I+G K ++ A +L + NM
Sbjct: 267 LVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA-MNLLREMLHKNMVPDT 325
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQ-KLEPSGIVVDRSVGFGIISACVNLGLSDK 386
TY ++ G ++G + NL+ E + +P+ +V S+ + + C N L DK
Sbjct: 326 V---TYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL---LDALCKNQNL-DK 378
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A ++ +M G + Y + CK R A +L + G +DV Y +I
Sbjct: 379 ATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMIS 438
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
F A ++ M + ++ I+ L E + L E++
Sbjct: 439 GLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMI 492
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE--KI 275
PN+Y+ N + G C + V +A ++ M + P+ ++ L + GL + +I
Sbjct: 288 PNVYSYNIMINGLC-KCKRVDEAMNLLREMLHKNMVPDTVTYNSL-----IDGLCKSGRI 341
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SK 330
+LMNE G + +V Y+SL+ K NL+ A+ + M++ +
Sbjct: 342 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFM------KMKERGIQPTM 395
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY ++ G + G +K L Q L G +D +IS G+ D+A +I
Sbjct: 396 YTYTALIDGLCKGGRLKNAQELF---QHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAI 452
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
+M GC + +++ ++ +A +L+ ++ + GL
Sbjct: 453 KSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 144/372 (38%), Gaps = 90/372 (24%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+ NA + G C L+ V+ AE ++ M GV P+ +F L Y G EK
Sbjct: 222 IRPDHITYNALINGLCK-LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 280
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ S M + G S ++ + S
Sbjct: 281 FTVLSDMQQKGIKSDVISFGS--------------------------------------- 301
Query: 336 VVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
VVK F +NG + ++ + + + P+ V + II A + G +++A ++++
Sbjct: 302 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN-----SIIDAYIESGDTEQAFLLVEK 356
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G S + Y LK C+ + EA +L+ + + GL+ DV +Y+ +I A D
Sbjct: 357 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 416
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A L ++M + I RP L ++
Sbjct: 417 TDKALELLQEMNKYGI------------------RPTL------------------RTYH 440
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+++ A AGR+ D + ++M+ EP+ Y +++ YV E V + E+
Sbjct: 441 TLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMS-- 498
Query: 574 ISTDGQKGIKFE 585
+KGI F+
Sbjct: 499 -----EKGIAFD 505
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 151/384 (39%), Gaps = 86/384 (22%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ ++ N + G + SDA KV + M +GV PN ++ + + G E
Sbjct: 14 PDAFSYNVVIAGLWRSGKG-SDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 72
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M G +V Y+ L+SG + G ++ +R ++ + +M F TY +
Sbjct: 73 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDE-TRVLMDEMASHSMFPDGF---TYSILF 128
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + G + + +L E+ K G++ + A
Sbjct: 129 DGLTRTGESRTMLSLFAESLK---KGVM----------------------------LGAY 157
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
CS+ L CK+ + A+A Q++ + +GL Y+ LI +D + A
Sbjct: 158 TCSI-------LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 210
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE------DPRVE----- 506
F +F M+ I +Y ++ GL + E++ D V+E DP VE
Sbjct: 211 FCIFEQMKSRHIRPDHITYNALINGLC---KLEMVTKAEDLVMEMEKSGVDPSVETFNTL 267
Query: 507 ------------------------VKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
+K+ + S++ AFCK G++ +A L MI+
Sbjct: 268 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 327
Query: 541 EPNDQTYLSLINGYVTA---EQYF 561
PN Q Y S+I+ Y+ + EQ F
Sbjct: 328 APNAQVYNSIIDAYIESGDTEQAF 351
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 163/397 (41%), Gaps = 48/397 (12%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL----------- 262
D KPNI N L G C + + + +++ M+ + P+ ++ L
Sbjct: 80 DGPKPNIVTYNVLLSGLCRAGR-MDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 138
Query: 263 -----------------AYLYA--LKGL--QEKIVELESLMNEF---GFSSQMVFYSSLI 298
AY + L GL K+ + E ++ G V Y++LI
Sbjct: 139 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 198
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEA 356
+GY ++ +L A C+ M+ + TY ++ G + V +L++E
Sbjct: 199 NGYCQVRDLRGA-----FCI-FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME- 251
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+E SG+ +I A G +K ++L +M G + + +KA+CK
Sbjct: 252 --MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN 309
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+ EA ++ D+ + + Y+++I+A I S D + AF L M+ + + +Y
Sbjct: 310 GKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTY 369
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
++ GL + + + A L + + + +N+II A C G + A L+ M
Sbjct: 370 NLLLKGLCRSSQID-EAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 428
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
P +TY +L++ +A + + ++ ++ K
Sbjct: 429 KYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHK 465
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 188/474 (39%), Gaps = 55/474 (11%)
Query: 124 RAFASVVYVI---EKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFEL- 179
R F +V++ + E D T +TL+ + AF L+ F +R P L
Sbjct: 271 RKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNS-FSSRGMEPGLLT 329
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD 239
+ L +C K + V E ++ L PN N L C ++ +
Sbjct: 330 YNAILYGLC-KIGKYDRAKDVLIEMLQLGL-------TPNAATYNTLLVEICRR-DNILE 380
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQEKIVELESLMNEFGFSSQMVFYSSLI 298
A+++ + MS GV P+ SF L + A G L + ++ M G V Y+ LI
Sbjct: 381 AQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFRE-MERSGIVPDNVIYTILI 439
Query: 299 SGYVKLGNLESA--SRTILLCLG------------GGNMEQSDFSKE------------- 331
G+ + G L A R +L G G ++ F+
Sbjct: 440 DGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMV 499
Query: 332 ----TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
T+ +++G+ ++GN+ NL + L+P + + +I G
Sbjct: 500 PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT-----LIDGFCKAGEMG 554
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A + D+M Y L +C EA L + G++ ++ + LI
Sbjct: 555 RAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLI 614
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ S D A+ M I SY T++ G ++ E ++E+ E +
Sbjct: 615 KGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEM-EKRGL 673
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ +N I++ FC G++++A++ LR+MI + P+ TY SLING+V+ +
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDN 727
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 190/464 (40%), Gaps = 29/464 (6%)
Query: 169 FKNRYFMPFELWG-GFLVDICRKNSNFVAFLK--VFEECCRIALDENLDFMKPNIYACNA 225
F+N F ++ G G DI N+ A+ + + EE ++ + M+P + NA
Sbjct: 273 FENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNA 332
Query: 226 ALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF 285
L G C + A+ V+ M LG+ PN +++ L + + I+E + + +E
Sbjct: 333 ILYGLC-KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR---DNILEAQEIFDEM 388
Query: 286 ---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGF 340
G +V +SSLI + G+L A + ME+S + Y ++ GF
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQA------LMHFREMERSGIVPDNVIYTILIDGF 442
Query: 341 LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
+NG L++ + ++ G +D ++ + A + +EM G
Sbjct: 443 CRNG---ALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMV 499
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
+ ++ YCK+ +A L + + L+ D Y+ LI+ + + A L
Sbjct: 500 PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL 559
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFC 520
+ DM I SY T++ G + D+++E + N++I +C
Sbjct: 560 WDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG-IRPNLVTCNTLIKGYC 618
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQK 580
++G + A L +MI P+ +Y +LI+GY+ ++ +E+++ +
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK-------R 671
Query: 581 GIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
G++F + L G QV+ K E+ + D Y
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATY 715
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 122/325 (37%), Gaps = 51/325 (15%)
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLK 199
+D T +T L + A A L M + F + + C K+ N L
Sbjct: 465 MDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYC-KDGNMDKALN 523
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
+FE R L KP+ N ++G C + A+++ + M + P+ S+
Sbjct: 524 LFEAMVRTNL-------KPDKVTYNTLIDGFCKA-GEMGRAKELWDDMIRKDIIPDHISY 575
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
G + + GL + + L M E G +V ++LI GY + G++ A + +
Sbjct: 576 GTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
G + S FS Y ++ G+L+ N+
Sbjct: 636 NGIIPDS-FS---YNTLIDGYLKEANL--------------------------------- 658
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
+KA +++EM G + Y L +C E + EA Q++ + G+ D
Sbjct: 659 -----EKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGA 713
Query: 440 NYDALIEASITSQDFQSAFSLFRDM 464
Y +LI ++ + + AF +M
Sbjct: 714 TYSSLINGHVSQDNMKEAFRFHDEM 738
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 113/285 (39%), Gaps = 12/285 (4%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ N L G C + +DA+ + M G+ P+ +F L Y G +K + L
Sbjct: 466 DVVTYNTFLNGLCKK-KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNL 524
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEV 336
M V Y++LI G+ K G + A +M + D + +Y V
Sbjct: 525 FEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL------WDDMIRKDIIPDHISYGTV 578
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ GF +G + NL Q LE GI + +I G KA+ L +M +
Sbjct: 579 LNGFCSSGLLPEALNLC--DQMLE-KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G Y + Y KE +A L+ ++ GLQ ++ Y+ ++ Q
Sbjct: 636 NGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQE 695
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
A + R M E I +Y +++ G + + F DE+++
Sbjct: 696 AEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ 740
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 119/314 (37%), Gaps = 41/314 (13%)
Query: 274 KIVELESLMNE-FGFSSQMVFYSSLISGYVKLGNLESASR------------TILLC--L 318
++ +ESL++ F F S + Y L+ YV+ L S +I C L
Sbjct: 169 RVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKL 228
Query: 319 GGGNMEQS--DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
GG + D + E Y EVV+G ++ NV L N+++ A + DR
Sbjct: 229 LGGLVRTGWVDLAWEIYGEVVRGGIEL-NVYTL-NIMVNA-------LCKDRKF------ 273
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
+ L +M G + Y + AYC+E EA QL+ SS G++
Sbjct: 274 --------ENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEP 325
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
+ Y+A++ + A + +M + + +Y T++ +
Sbjct: 326 GLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIF 385
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
DE+ V ++S+I + G L A R M P++ Y LI+G+
Sbjct: 386 DEMSRRG-VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444
Query: 557 AEQYFSVLMMWHEI 570
L M E+
Sbjct: 445 NGALSDALKMRDEM 458
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 154/373 (41%), Gaps = 89/373 (23%)
Query: 188 CRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETM 247
CR N N + LK+ +E L++ ++ A N L G C + ++DA+K+ + M
Sbjct: 304 CR-NGNMLEALKIRDE----MLEQGCVL---DVIAYNTILNGLCKE-KMLTDADKLFDEM 354
Query: 248 SVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL 307
G P+ +F L + + G K + L M + +V Y++LI G+ K+G +
Sbjct: 355 VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEM 414
Query: 308 ESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
E AS E+ G + ++K+ P+ I
Sbjct: 415 EKAS-----------------------ELWDGMI--------------SRKIFPNHIT-- 435
Query: 368 RSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+GI I+A ++G +A + D M G L +K YC+ +++A + +
Sbjct: 436 ----YGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFL 491
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ + G+ D +Y+ LI + + AF M + GL+
Sbjct: 492 GRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKE--------------GLL-- 535
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
P+++ +N +++ FC+ GR+++A+ LR+MI P+ T
Sbjct: 536 --PDIIT------------------YNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRST 575
Query: 547 YLSLINGYVTAEQ 559
Y +LING+VT +
Sbjct: 576 YTALINGHVTQDN 588
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 154/420 (36%), Gaps = 75/420 (17%)
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKP----NIYACNAALEGCCYGLQSV 237
G+LV I NS +K+ + +A + + + ++ N+Y N + C
Sbjct: 78 GYLVSINACNSLLGGLVKI--DWVELAWEVHREVVRSGIELNVYTLNIMVNALCKD-GKF 134
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
D + + M G+ + ++ L Y +GL E+ E+ + M + G + Y+++
Sbjct: 135 DDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAI 194
Query: 298 ISGYVKLGNLESASRTILLCLGGG--------------NMEQSDFSKETYCEVVKGFLQN 343
I+G K G A ++ L G + + +FS+ E+ L+
Sbjct: 195 INGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAK--EIFGEMLRQ 252
Query: 344 GNVKGLANL----------------IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
G V L + ++ + ++ G+V D + ++ G +A
Sbjct: 253 GVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEA 312
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
I DEM GC + + Y L CKE +A +L ++ G D + LI
Sbjct: 313 LKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHG 372
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ A SLF M + N +P+++A
Sbjct: 373 HCQDGNMTKALSLFGTMTQ------------------RNIKPDIVA-------------- 400
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N++I FCK G +E A MI + PN TY LIN Y + +W
Sbjct: 401 ----YNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLW 456
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 164/389 (42%), Gaps = 27/389 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP+++ NA + G C + +IE +++ G+ P+ +++ L + +
Sbjct: 184 LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNI-GLSPDTTTYNTLLVESCRRDNFSEA 242
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--Y 333
E+ M G +V +SSLI+ + + +L+ A +M++ + Y
Sbjct: 243 KEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFR------DMKKFGLVPDNVIY 296
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G+ +NGN+ L L I + LE G V+D I++ + A + DE
Sbjct: 297 TVLMHGYCRNGNM--LEALKIRDEMLE-QGCVLDVIAYNTILNGLCKEKMLTDADKLFDE 353
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G + + +C++ +A L ++ ++ D+ Y+ LI+ +
Sbjct: 354 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 413
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLME-NHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A L+ M +I+ +Y ++ H E A L +V+ + ++
Sbjct: 414 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSE--AFRLWDVMIEKGIKPTLVTC 471
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
N++I +C++G A L RMI P+ +Y +LING+V + + +++++
Sbjct: 472 NTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEK 531
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGF 601
E L D Y +V GF
Sbjct: 532 ------------EGLLPDIITYNVVMNGF 548
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 140/338 (41%), Gaps = 46/338 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+I ++ L G C+G + +SDA +++ M +G RP+ +F L + L + V
Sbjct: 152 EPSIVTLSSLLNGYCHG-KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L M + G +V Y +++G K G+ + A
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA-------------------------- 244
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
NL+ K+E + I D + II + D A ++ EM
Sbjct: 245 -------------LNLL---NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + Y + C R ++A+QL+ D+ + ++ ++ALI+A + F
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV-EDPRVEVKTHDWNSI 515
A L+ DM + I +Y +++ G + R + + +V +D +V T +N++
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT--YNTL 406
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
I FCK+ R+ED R M + TY +LI G
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 188/476 (39%), Gaps = 67/476 (14%)
Query: 110 IAHLSSLQDNHNLKRAFASVVYVIEKNPKL---LDFQTVHTLLGSMRNANTAAPAFALVK 166
I LSSL + + + + V ++++ ++ D T TL+ + N A+ A ALV
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 167 CMFKNRYFMPFELWGGFLVD-ICRKNSNFVAF-LKVFEECCRIALDENLDFMKPNIYACN 224
M + R P + G +V+ +C++ +A L E +I D + N
Sbjct: 215 RMVQ-RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD---------VVIFN 264
Query: 225 AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE 284
++ C + V DA + + M G+RPN ++ L G +L S M E
Sbjct: 265 TIIDSLC-KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 285 FGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQ 342
+ +V +++LI +VK G A + +M + + TY +V GF
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLY------DDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 343 NGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
+ + DKA + + M + C
Sbjct: 378 HDRL--------------------------------------DKAKQMFEFMVSKDCFPD 399
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+ Y +K +CK R + T+L ++S GL D Y LI+ D +A +F+
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 463 DMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKA 522
M + +Y ++ GL N + E D ++ +++ + + ++I CKA
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
G+++D + +PN TY ++I+G + +L + + +K+ DG
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR----LLQEAYALLKKMKEDG 570
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 125/316 (39%), Gaps = 22/316 (6%)
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
L+D K FV K++++ + ++D P+I+ N+ + G C + A+++
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSID-------PDIFTYNSLVNGFCMH-DRLDKAKQM 387
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
E M P+ ++ L + E EL M+ G V Y++LI G
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
G+ ++A + + G D TY ++ G NG ++ + QK E
Sbjct: 448 DGDCDNAQKVFKQMVSDG--VPPDIM--TYSILLDGLCNNGKLEKALEVFDYMQKSE--- 500
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
I +D + +I G D + ++ G + Y + C + EA
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
L+ + G + G Y+ LI A + D ++ L R+MR R G TI GL
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV---GDASTI--GL 615
Query: 484 MEN--HRPELMAAFLD 497
+ N H L +FLD
Sbjct: 616 VANMLHDGRLDKSFLD 631
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 157/393 (39%), Gaps = 46/393 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA-YLYALKGLQEKI 275
KPNI N ++ C V++A K+ + M + G+ PN S + L L+E
Sbjct: 382 KPNISTYNIIIDMLCMA-GRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAH 440
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
ES +E G + V Y SLI G K G ++ A R L G+ D + Y
Sbjct: 441 RIFES-ASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGH----DANPIIYTS 495
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+++ F +G + + E + G D ++ + G +K +I ++M
Sbjct: 496 LIRNFFMHGRKEDGHKIYKEMIR---RGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMK 552
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ G + Y + K + E + + +S G LD Y+A+++ S
Sbjct: 553 SFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVD 612
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A+ + +M+ ++ +Y +I+ GL + R + A L E + +E+ ++S+
Sbjct: 613 KAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLD-EAYMLFEEAKSKGIELNVILYSSL 671
Query: 516 IHAFCKAGRLEDAKRTLRRMIF-----------------------------------LQF 540
I F K GR+++A L M+ ++
Sbjct: 672 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKC 731
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
PN TY LING ++Y + W E++++
Sbjct: 732 SPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQ 764
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 172/465 (36%), Gaps = 66/465 (14%)
Query: 148 LLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRI 207
+L S++N + AAP F L + +P + + L + + + A KV EE
Sbjct: 81 VLRSLKNPSLAAPFFLLASA--SSSQPLPPDAYNAVLPFL---SHDLAALEKVLEEM--- 132
Query: 208 ALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
+L + PN AC AAL + + DA +VI M L RP S++ L A
Sbjct: 133 ---SHLGYGLPNP-AC-AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALA 187
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
E+ +EL M + G+ + +++L+ + G +E A +
Sbjct: 188 EARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALV------------- 234
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG-FGIISACVNLGLSDK 386
+ VKG LEP ++ + + FG G D
Sbjct: 235 -------DEVKG-----------------SCLEPDIVLYNVCIDCFG------KAGSVDM 264
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A E+ A G Y + CK R EA +L + + Y+ +I
Sbjct: 265 AWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIM 324
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+++ F A+ L +RE S+ +I+T L + + + D + +D +
Sbjct: 325 GYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPN 384
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+ T +N II C AGR+ +A + M PN + +++ A Q
Sbjct: 385 IST--YNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQ------- 435
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
E R + ++G + + L K G D ++ EK
Sbjct: 436 LEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEK 480
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 106/267 (39%), Gaps = 8/267 (2%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ N ++ C + V + E M G P+ S+ L + G +
Sbjct: 522 RPDLTLLNTYMD-CVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETS 580
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+ M++ GF+ Y++++ G K G ++ A L ++ + TY +
Sbjct: 581 NIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEV----LEEMKVKHVHPTVATYGSI 636
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V G + + L EA+ GI ++ + +I +G D+A+ IL+EM
Sbjct: 637 VDGLAKIDRLDEAYMLFEEAKS---KGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMK 693
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + + + + A K EA + + Y LI Q +
Sbjct: 694 KGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNK 753
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGL 483
AF +++M++ + +Y T+++GL
Sbjct: 754 AFVFWQEMQKQGLIPNVVTYTTMISGL 780
>gi|145517919|ref|XP_001444837.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412270|emb|CAK77440.1| unnamed protein product [Paramecium tetraurelia]
Length = 981
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 109/530 (20%), Positives = 215/530 (40%), Gaps = 69/530 (13%)
Query: 61 QTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNH 120
Q Q I ++ T + + N ++AWK+F++L P +LI L + DN
Sbjct: 314 QAKIQPTIVTINTMIDQYFKNNQREKAWKTFENLKLTQTKPDNFTYTTLINGLKN-SDNM 372
Query: 121 NLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELW 180
+LK AF+ ++ K D + LL + NA F L+ M +++ E+
Sbjct: 373 DLKLAFS--LFEEYKQYNQPDQIIYNCLLDACINAGDLNRGFQLLNEMKQSQTIQLDEIT 430
Query: 181 GGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDA 240
L+ C + L +FEE I + KPN + N+ L+ C ++ A
Sbjct: 431 YNTLIKGCGRKKRLNDALNLFEEMKLIGI-------KPNRISFNSLLDSCV-KCNKMNIA 482
Query: 241 EKVIETM-SVLGVRPNESSFGFLAYLYALKG-------LQEKIVELESLMNEFGFSSQMV 292
+ E M G+ P+ ++ L + +K L I LE + F +
Sbjct: 483 WRYFEEMRKQYGIFPDNFTYSIL--VNGIKTNHSNRDELLRAITLLEQIQETGQFKPDEI 540
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL 352
Y+SLI VK ++ + +Q + S TY ++K + + ++ G A
Sbjct: 541 LYNSLIDACVKFNEIQKG----MELFREMKNKQIEPSSVTYGILIKAYGKQNDLNG-AFK 595
Query: 353 IIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
I E K + I V +G ++ ACV D+A +D+M + + +Y +K
Sbjct: 596 IFEEMKQKKIPI---NDVTYGCLVDACVRNDRLDQALQFIDQMKSQNLPINTVLYTTIIK 652
Query: 412 AYCKEHRTAEATQLVMDI--SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+CK ++T EA + D+ S ++ Y++L++ + + A LF+++ +++I
Sbjct: 653 GFCKLNQTEEAIK-YFDLMKQSPKTYPNLITYNSLLDGMVKNGLLNQADKLFQELVDSKI 711
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+P+L+ +++++ C+ G ++
Sbjct: 712 ------------------KPDLIT------------------FSTLLKGHCRKGNMKRLN 735
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQ 579
T++ M LQ P++ ++ + +QY + ++ + +I Q
Sbjct: 736 ETVQIMTGLQISPDESLLQLILEACLNQQQYHIGVQIFDQFCHQIPQSTQ 785
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 163/383 (42%), Gaps = 32/383 (8%)
Query: 249 VLGVRPNESSFGFLAYLYALKGLQEKIVE--LESLMNEFGFSSQMVFYSSLISGYVKLGN 306
V+ + P + F L YA + Q ++ E L + ++ +V +++I Y K
Sbjct: 278 VINLHPTDIFFNKLID-YAFRKSQVEMAEYLLVFMRDQAKIQPTIVTINTMIDQYFKNNQ 336
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK-GLANLIIEAQKL--EPSG 363
E A +T + Q+ TY ++ G + N+ LA + E K +P
Sbjct: 337 REKAWKT----FENLKLTQTKPDNFTYTTLINGLKNSDNMDLKLAFSLFEEYKQYNQPDQ 392
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG--VYVPTLKAYCKEHRTAE 421
I+ + ++ AC+N G ++ +L+EM ++ L Y +K ++ R +
Sbjct: 393 IIYN-----CLLDACINAGDLNRGFQLLNEMKQSQ-TIQLDEITYNTLIKGCGRKKRLND 446
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR-IYDLKGSYLTIM 480
A L ++ G++ + ++++L+++ + A+ F +MR+ I+ +Y ++
Sbjct: 447 ALNLFEEMKLIGIKPNRISFNSLLDSCVKCNKMNIAWRYFEEMRKQYGIFPDNFTYSILV 506
Query: 481 TGLMENH--RPELMAA--FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
G+ NH R EL+ A L+++ E + + +NS+I A K ++ R M
Sbjct: 507 NGIKTNHSNRDELLRAITLLEQIQETGQFKPDEILYNSLIDACVKFNEIQKGMELFREMK 566
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYAL 596
Q EP+ TY LI Y ++ E+K QK I + A
Sbjct: 567 NKQIEPSSVTYGILIKAYGKQNDLNGAFKIFEEMK-------QKKIPINDVTYGCLVDAC 619
Query: 597 VKGGFFDAVMQVVE--KSQEMKV 617
V+ D +Q ++ KSQ + +
Sbjct: 620 VRNDRLDQALQFIDQMKSQNLPI 642
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 188/474 (39%), Gaps = 55/474 (11%)
Query: 124 RAFASVVYVI---EKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFEL- 179
R F +V++ + E D T +TL+ + AF L+ F +R P L
Sbjct: 271 RKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNS-FSSRGMEPGLLT 329
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD 239
+ L +C K + V E ++ L PN N L C ++ +
Sbjct: 330 YNAILYGLC-KIGKYDRAKDVLIEMLQLGL-------TPNAATYNTLLVEICRR-DNILE 380
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQEKIVELESLMNEFGFSSQMVFYSSLI 298
A+++ + MS GV P+ SF L + A G L + ++ M G V Y+ LI
Sbjct: 381 AQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFRE-MERSGIVPDNVIYTILI 439
Query: 299 SGYVKLGNLESA--SRTILLCLG------------GGNMEQSDFSKE------------- 331
G+ + G L A R +L G G ++ F+
Sbjct: 440 DGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMV 499
Query: 332 ----TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
T+ +++G+ ++GN+ NL + L+P + + +I G
Sbjct: 500 PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT-----LIDGFCKAGEMG 554
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A + D+M Y L +C EA L + G++ ++ + LI
Sbjct: 555 RAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLI 614
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ S D A+ M I SY T++ G ++ E ++E+ E +
Sbjct: 615 KGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEM-EKRGL 673
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ +N I++ FC G++++A++ LR+MI + P+ TY SLING+V+ +
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDN 727
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 190/464 (40%), Gaps = 29/464 (6%)
Query: 169 FKNRYFMPFELWG-GFLVDICRKNSNFVAFLK--VFEECCRIALDENLDFMKPNIYACNA 225
F+N F ++ G G DI N+ A+ + + EE ++ + M+P + NA
Sbjct: 273 FENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNA 332
Query: 226 ALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF 285
L G C + A+ V+ M LG+ PN +++ L + + I+E + + +E
Sbjct: 333 ILYGLC-KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR---DNILEAQEIFDEM 388
Query: 286 ---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGF 340
G +V +SSLI + G+L A + ME+S + Y ++ GF
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQA------LMHFREMERSGIVPDNVIYTILIDGF 442
Query: 341 LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
+NG L++ + ++ G +D ++ + A + +EM G
Sbjct: 443 CRNG---ALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMV 499
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
+ ++ YCK+ +A L + + L+ D Y+ LI+ + + A L
Sbjct: 500 PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL 559
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFC 520
+ DM I SY T++ G + D+++E + N++I +C
Sbjct: 560 WDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG-IRPNLVTCNTLIKGYC 618
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQK 580
++G + A L +MI P+ +Y +LI+GY+ ++ +E+++ +
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK-------R 671
Query: 581 GIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
G++F + L G QV+ K E+ + D Y
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATY 715
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 122/325 (37%), Gaps = 51/325 (15%)
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLK 199
+D T +T L + A A L M + F + + C K+ N L
Sbjct: 465 MDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYC-KDGNMDKALN 523
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
+FE R L KP+ N ++G C + A+++ + M + P+ S+
Sbjct: 524 LFEAMVRTNL-------KPDKVTYNTLIDGFCKA-GEMGRAKELWDDMIRKDIIPDHISY 575
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
G + + GL + + L M E G +V ++LI GY + G++ A + +
Sbjct: 576 GTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
G + S FS Y ++ G+L+ N+
Sbjct: 636 NGIIPDS-FS---YNTLIDGYLKEANL--------------------------------- 658
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
+KA +++EM G + Y L +C E + EA Q++ + G+ D
Sbjct: 659 -----EKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGA 713
Query: 440 NYDALIEASITSQDFQSAFSLFRDM 464
Y +LI ++ + + AF +M
Sbjct: 714 TYSSLINGHVSQDNMKEAFRFHDEM 738
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 113/285 (39%), Gaps = 12/285 (4%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ N L G C + +DA+ + M G+ P+ +F L Y G +K + L
Sbjct: 466 DVVTYNTFLNGLCKK-KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNL 524
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEV 336
M V Y++LI G+ K G + A +M + D + +Y V
Sbjct: 525 FEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL------WDDMIRKDIIPDHISYGTV 578
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ GF +G + NL Q LE GI + +I G KA+ L +M +
Sbjct: 579 LNGFCSSGLLPEALNLC--DQMLE-KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G Y + Y KE +A L+ ++ GLQ ++ Y+ ++ Q
Sbjct: 636 NGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQE 695
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
A + R M E I +Y +++ G + + F DE+++
Sbjct: 696 AEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ 740
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 119/314 (37%), Gaps = 41/314 (13%)
Query: 274 KIVELESLMNE-FGFSSQMVFYSSLISGYVKLGNLESASR------------TILLC--L 318
++ +ESL++ F F S + Y L+ YV+ L S +I C L
Sbjct: 169 RVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKL 228
Query: 319 GGGNMEQS--DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
GG + D + E Y EVV+G ++ NV L N+++ A + DR
Sbjct: 229 LGGLVRTGWVDLAWEIYGEVVRGGIEL-NVYTL-NIMVNA-------LCKDRKF------ 273
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
+ L +M G + Y + AYC+E EA QL+ SS G++
Sbjct: 274 --------ENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEP 325
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
+ Y+A++ + A + +M + + +Y T++ +
Sbjct: 326 GLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIF 385
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
DE+ V ++S+I + G L A R M P++ Y LI+G+
Sbjct: 386 DEMSRRG-VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444
Query: 557 AEQYFSVLMMWHEI 570
L M E+
Sbjct: 445 NGALSDALKMRDEM 458
>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Vitis vinifera]
gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
Length = 567
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 157/374 (41%), Gaps = 59/374 (15%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A KV+E M G P+ +S FL +G ++L M E+G+ + V Y+SL+
Sbjct: 116 ATKVMELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVR 175
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL--ANLIIEAQ 357
G LC+ G N+ QS +++ F++ G V + + ++EA
Sbjct: 176 G---------------LCMHG-NLSQS-------LQILDKFMKKGLVPNVFTYSFLLEAA 212
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
E +D+A +LDE+ A G L Y L CKE
Sbjct: 213 YKERG---------------------ADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEG 251
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
RT EA Q D+ S G +V +Y+ L+ + ++ A L +M + S +
Sbjct: 252 RTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGG---ERSPSIV 308
Query: 478 T--IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
T I+ G + H A + + + R + +N II CK G+++ + L +M
Sbjct: 309 TFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQM 368
Query: 536 IFLQFEPNDQTY--LSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF----EHNLV 589
++ + PN+ TY ++++ ++ FS++ + + D KG+ + N
Sbjct: 369 MYRRCNPNEGTYNAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTY 428
Query: 590 DAF--LYALVKGGF 601
AF LY + K GF
Sbjct: 429 PAFQLLYEMTKYGF 442
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 137/350 (39%), Gaps = 16/350 (4%)
Query: 215 FMK----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
FMK PN++ + LE Y + +A ++++ + G +PN S+ L +G
Sbjct: 193 FMKKGLVPNVFTYSFLLEAA-YKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEG 251
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
E+ ++ + GFS +V Y+ L+ G E A + +L + GG S
Sbjct: 252 RTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKA-KELLAEMDGGERSPSIV-- 308
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
T+ ++ +G ++ + + + II+ G D
Sbjct: 309 -TFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNP---IIARLCKEGKVDLVVKC 364
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
LD+M C+ G Y + C+E + EA ++ + + Y +I +
Sbjct: 365 LDQMMYRRCNPNEGTY-NAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCR 423
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM-ENHRPELMAAFLDEVVEDPRVEVKT 509
+ AF L +M + +Y +++ GL E E M F ++E+
Sbjct: 424 KGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIF--SIMEENYCRPDV 481
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
++N++I CK + + + M+ + PN+ TY ++ G E+
Sbjct: 482 DNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEE 531
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 113/282 (40%), Gaps = 9/282 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ + N L CY A++++ M P+ +F L AL G ++ +E
Sbjct: 270 PNVVSYNILLRSLCYE-GRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALE 328
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M+ F + Y+ +I+ K G ++ ++ CL + + ++ TY +
Sbjct: 329 VLDDMSRARFKATAASYNPIIARLCKEGKVD----LVVKCLDQMMYRRCNPNEGTY-NAI 383
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+ G V+ ++I Q L G+IS+ G + A +L EM
Sbjct: 384 AVLCEEGKVQEAFSII---QSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKY 440
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G Y ++ C E EA ++ + + + DV N++ALI + +
Sbjct: 441 GFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLS 500
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
+F M + + +Y I+ G+ EL AA L E+
Sbjct: 501 LMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKEL 542
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 144/372 (38%), Gaps = 90/372 (24%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+ NA + G C L+ V+ AE ++ M GV P+ +F L Y G EK
Sbjct: 400 IRPDHITYNALINGLCK-LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ S M + G S ++ + S
Sbjct: 459 FTVLSDMQQKGIKSDVISFGS--------------------------------------- 479
Query: 336 VVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
VVK F +NG + ++ + + + P+ V + II A + G +++A ++++
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN-----SIIDAYIESGDTEQAFLLVEK 534
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G S + Y LK C+ + EA +L+ + + GL+ DV +Y+ +I A D
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A L ++M + I RP L ++
Sbjct: 595 TDKALELLQEMNKYGI------------------RPTL------------------RTYH 618
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+++ A AGR+ D + ++M+ EP+ Y +++ YV E V + E+
Sbjct: 619 TLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMS-- 676
Query: 574 ISTDGQKGIKFE 585
+KGI F+
Sbjct: 677 -----EKGIAFD 683
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 143/364 (39%), Gaps = 85/364 (23%)
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
SDA KV + M +GV PN ++ + + G E L M G +V Y+ L
Sbjct: 211 SDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVL 270
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
+SG + G ++ +R ++ + +M F TY + G + G + + +L E+
Sbjct: 271 LSGLCRAGRMDE-TRVLMDEMASHSMFPDGF---TYSILFDGLTRTGESRTMLSLFAESL 326
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
K G++ + A CS+ L CK+
Sbjct: 327 K---KGVM----------------------------LGAYTCSI-------LLNGLCKDG 348
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+ A+A Q++ + +GL Y+ LI +D + AF +F M+ I +Y
Sbjct: 349 KVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 408
Query: 478 TIMTGLMENHRPELMAAFLDEVVE------DPRVE------------------------- 506
++ GL + E++ D V+E DP VE
Sbjct: 409 ALINGLC---KLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465
Query: 507 ----VKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA--- 557
+K+ + S++ AFCK G++ +A L MI+ PN Q Y S+I+ Y+ +
Sbjct: 466 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDT 525
Query: 558 EQYF 561
EQ F
Sbjct: 526 EQAF 529
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 163/397 (41%), Gaps = 48/397 (12%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL----------- 262
D KPNI N L G C + + + +++ M+ + P+ ++ L
Sbjct: 258 DGPKPNIVTYNVLLSGLCRAGR-MDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 316
Query: 263 -----------------AYLYA--LKGL--QEKIVELESLMNEF---GFSSQMVFYSSLI 298
AY + L GL K+ + E ++ G V Y++LI
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 376
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEA 356
+GY ++ +L A C+ M+ + TY ++ G + V +L++E
Sbjct: 377 NGYCQVRDLRGA-----FCI-FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME- 429
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+E SG+ +I A G +K ++L +M G + + +KA+CK
Sbjct: 430 --MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN 487
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+ EA ++ D+ + + Y+++I+A I S D + AF L M+ + + +Y
Sbjct: 488 GKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTY 547
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
++ GL + + + A L + + + +N+II A C G + A L+ M
Sbjct: 548 NLLLKGLCRSSQID-EAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 606
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
P +TY +L++ +A + + ++ ++ K
Sbjct: 607 KYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHK 643
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 156/367 (42%), Gaps = 28/367 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL---- 271
M N + CN + G C + +A ++E M V P+ ++ L ++GL
Sbjct: 242 MSANKFTCNIWIRGLCED-GRLEEAVALVERMGAY-VAPDVVTYNTL-----MRGLCKDS 294
Query: 272 --QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
QE L +MN+ G Y+++I GY K G L+ A+ + + G +
Sbjct: 295 KVQEAAQYLGRMMNQ-GCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPD---- 349
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQ--KLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
+ TYC ++ G G+++ L EAQ L+P +V + ++ GL A
Sbjct: 350 RVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYN-----SLVKGLCRQGLILHA 404
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+++EM GC + Y + CK ++A ++ D G DV ++ LI+
Sbjct: 405 LQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDG 464
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP-ELMAAFLDEVVEDPRVE 506
SA L M I +Y +++ GL + + E+ F + +++ R
Sbjct: 465 YCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN 524
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
T +N +I FCK +LE+A + RM P+ ++ +LI+G+ ++
Sbjct: 525 AIT--YNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLL 582
Query: 567 WHEIKRK 573
+ ++ K
Sbjct: 583 FQKLDEK 589
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 136/359 (37%), Gaps = 16/359 (4%)
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
YA G V+ M+ F Y++++ V + A + + L G
Sbjct: 81 YARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPD 140
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
+ T+ +K F G L+ + L G + ++ G
Sbjct: 141 A----RTHTVRLKSFCLTGRPHVALRLL---RSLSERGCDAKPAAYCTVVRGLYAHGHGY 193
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
A + DEM + + L A C++ E+ L+ + G+ + + I
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ A +L M D+ +Y T+M GL ++ + + A +L ++ +
Sbjct: 254 RGLCEDGRLEEAVALVERMGAYVAPDVV-TYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI 312
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
+N+II +CK+G L++A L+ +F F P+ TY SLING L
Sbjct: 313 P-DDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALE 371
Query: 566 MWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+++E + K +K + + ++ + L + G +QV+ + E D W Y
Sbjct: 372 LFNEAQ-------AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTY 423
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 139/325 (42%), Gaps = 15/325 (4%)
Query: 233 GLQSVSDAEKVIETMS---VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
GL + D E+ +E + ++P+ + L +GL +++ + M E G
Sbjct: 359 GLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHP 418
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
+ Y+ +I+G K+GN+ A+ + + G + T+ ++ G+ + +
Sbjct: 419 DIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV----FTFNTLIDGYCKRLKLDSA 474
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
L+ +++ GI D +++ G + + + +EM GC Y
Sbjct: 475 LQLV---ERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNIL 531
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ +CK ++ EA+ +++ + GL D +++ LI + D A+ LF+ + E +
Sbjct: 532 IENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDE-KG 590
Query: 470 YDLKGSYLTIMTGLMENHRPELMAA--FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
Y I+ G + MA F + + + + ++ T + ++ CKA ++
Sbjct: 591 YSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYT--YRILVDGLCKAANVDR 648
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLIN 552
A L MI F P+ T+ ++N
Sbjct: 649 AYAHLAEMISKGFVPSMATFGRMLN 673
>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
gi|223945505|gb|ACN26836.1| unknown [Zea mays]
Length = 462
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 149/364 (40%), Gaps = 39/364 (10%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ Y N L+G C Q AE+++ M PNE +F + GL ++ VE
Sbjct: 5 PDTYTYNTVLKGLCCAKQW-EQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVE 63
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR---TIL--------------LCLGG 320
L M ++G + ++ YS+L++G+ + G ++ A + T+L LC+ G
Sbjct: 64 LLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIAG 123
Query: 321 GNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRS 369
E + E T+ ++ QN V+ ++ + QK G + D
Sbjct: 124 RWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKY---GYMPDVV 180
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
IIS + +D A +L M C + LK CK R +A +LV +
Sbjct: 181 SYNTIISCFSDQARADDALKLLKSM---LCKPDTISFNAVLKCLCKAKRWYDAVELVAKM 237
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+++ ++ LI++ + + A +F M + R +Y +++ G E
Sbjct: 238 LKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLD 297
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
E+ AF ++ +N+ + C A R +DA + M+ PN+ T+
Sbjct: 298 EM--AF--DLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNI 353
Query: 550 LING 553
LI+
Sbjct: 354 LISS 357
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 144/365 (39%), Gaps = 41/365 (11%)
Query: 212 NLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL 271
N +PN NAAL+G C + E + E M PN+++F L L
Sbjct: 101 NTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAE-MVRKDCPPNDATFSTLINSLCQNRL 159
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR---------------TILL 316
E VE+ M ++G+ +V Y+++IS + + A + +L
Sbjct: 160 VEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLK 219
Query: 317 CLGG-----------GNMEQSD--FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
CL M + D ++ T+ ++ QNG VK IE +L P
Sbjct: 220 CLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKD----AIEVFELMPKY 275
Query: 364 IVVDRSVGF-GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
+ V + +I+ GL + A + M C + Y TLK C R +A
Sbjct: 276 RCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDA 332
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+L+ D+ + + ++ LI + A ++ M + I +Y ++ G
Sbjct: 333 GELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALING 392
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
E R + FL + +P T +NSI+ C+A R +DA++ + M+ P
Sbjct: 393 YSEQGRLDDALKFLSTMPCEP----DTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTP 448
Query: 543 NDQTY 547
N+ T+
Sbjct: 449 NEVTF 453
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 140/347 (40%), Gaps = 53/347 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ A N ++G + +A KV++ M P E ++G L G E+ E
Sbjct: 258 PDAIAYNTMIDGLAKAGHA-QEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
L +M GF V Y+SLI G+ K G ++ A C M ++ + + T+
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA------CSLFDEMVEAGYRPDVITHTV 370
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G ++GN + A E + VV + II +G A I+ M
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTT---IIQGLSKIGRVANAFRIMKGMI 427
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A GC Y+ L +CK R EA QL+ D L + S +S + Q
Sbjct: 428 AHGCFPDSVTYICLLDGFCKLGRLDEAAQLL---------------DELDKCS-SSPNLQ 471
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN-- 513
SL + + + G +EN LD++ E + + D
Sbjct: 472 LYSSLVKGLCDG--------------GSVENT--------LDDLFEQSKAAAENLDPGLC 509
Query: 514 -SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
SII CK GRL++A R +RM+ +P+ TY LING + +
Sbjct: 510 CSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 165/399 (41%), Gaps = 36/399 (9%)
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
++D K+ NF K FEE R KPN+ ++G + V++A ++
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGC-------KPNVVTYTTIIQGL-SKIGRVANAFRI 422
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
++ M G P+ ++ L + G ++ +L +++ S + YSSL+ G
Sbjct: 423 MKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCD 482
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETY-----CEVVKGFLQNGNVKGLANLIIEAQK 358
G++E+ + EQS + E C ++ G + G + + Q+
Sbjct: 483 GGSVENTLDDLF--------EQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIF---QR 531
Query: 359 LEPSGIVVDRSVGFGIISACVNL--GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+ G D + +I+ ++A ++L ++ G Y P CK
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKI 591
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-REARIYDLKGS 475
A +++ + SS G DV Y AL A SLF++M R+ D +
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPD-AAA 650
Query: 476 YLTIMTGLMENHRPELMAAFLDEVV---EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
Y I+ GL++ + E F DE++ + P V + +++ A C AG +++A
Sbjct: 651 YCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVAT----YTALVQALCHAGNVDEAFHRF 706
Query: 533 RRMIFL-QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
M+ + + Y +LI+G+ A + + L ++ ++
Sbjct: 707 EGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDM 745
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 124/327 (37%), Gaps = 56/327 (17%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGF-SSQMVF 293
+ DA E M +P+ +F L G+ EK E+ M GF
Sbjct: 168 RRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRAL 227
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
+++++ +K ++ A G ME+ F + N + GLA
Sbjct: 228 HTAMVRTLLKAKRVKEAREVF------GQMEKCGFPPDA-------IAYNTMIDGLAKA- 273
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC---SVGLGVYVPTL 410
G + +A +LD M A C V G+ V +L
Sbjct: 274 ----------------------------GHAQEALKVLDNMLAKACVPTEVTYGILVNSL 305
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
CK A +L +++SG + + Y +LI S + A SLF +M EA
Sbjct: 306 ---CKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYR 362
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLED 527
++ ++ GL ++ E A +E++ P V + +II K GR+ +
Sbjct: 363 PDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT----YTTIIQGLSKIGRVAN 418
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGY 554
A R ++ MI P+ TY+ L++G+
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGF 445
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 2/188 (1%)
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG-LQLDVGNYD 442
+D A + + M C L ++ + CK +A ++ ++ + G + D +
Sbjct: 170 ADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHT 229
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
A++ + ++ + A +F M + +Y T++ GL + + LD ++
Sbjct: 230 AMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
V + + ++++ CKAG LE A+ R M F PN Y SLI+G+ + +
Sbjct: 290 ACVPTEV-TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKE 348
Query: 563 VLMMWHEI 570
++ E+
Sbjct: 349 ACSLFDEM 356
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 83/203 (40%), Gaps = 3/203 (1%)
Query: 372 FGIISACV-NLGLSDKAHSILDEMNACG-CSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
F I+ C+ G+ +KA + EM A G ++ ++ K R EA ++ +
Sbjct: 192 FLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQM 251
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
G D Y+ +I+ + Q A + +M + +Y ++ L +
Sbjct: 252 EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTL 311
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
E A L V+ + + S+IH F K+GR+++A M+ + P+ T+
Sbjct: 312 E-RAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370
Query: 550 LINGYVTAEQYFSVLMMWHEIKR 572
+I+G + + + E+ R
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMR 393
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 113/530 (21%), Positives = 211/530 (39%), Gaps = 68/530 (12%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
DEA + + N P N LI S+L L AF + E+ + D T
Sbjct: 96 DEALRLLAEMRDNGCVPDVRTYNCLI---STLGKAGRLSEAFTLFAEMRERGC-VPDTFT 151
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFEL--WGGFLVDICRKNSNFVAFLKVFE 202
++L+ + + A L++ M R+ P ++ + + + + AF K+F+
Sbjct: 152 YNSLIYGLGKVGRSQKAMELLEEM--ERHGCPPDVMTYSSLITGLGKDGETVKAF-KLFQ 208
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
E R KP+ A ++ + V DA ++++ M GV+P ++ L
Sbjct: 209 EMKRRG-------RKPDSITFTALMDALGKAGR-VDDALELLDEMKERGVKPGVVTYNAL 260
Query: 263 AYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
+ G +VE +L++E G +V YS LI+G +K L+ A + +
Sbjct: 261 IAGFGKVG---DLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVL----- 312
Query: 320 GGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
ME+ +T Y ++ G + G + L +++ G D +I+A
Sbjct: 313 -KKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLF---DRMKSKGCNPDVVTYSTLITA 368
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
+ A + +EM + G L Y + K + +A +L ++ GL D
Sbjct: 369 LGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPD 428
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
V Y+A + + F+ A +F DM+E+ + +Y ++ GL + + L
Sbjct: 429 VITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLK 488
Query: 498 EVVE----------DPRVEVKT--------HD----------------WNSIIHAFCKAG 523
E++E D +E+ T H+ +N++I A KAG
Sbjct: 489 ELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAG 548
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
R+ +A TL + +P+ +Y SLI+ Q + + E+ ++
Sbjct: 549 RVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKR 598
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 162/413 (39%), Gaps = 26/413 (6%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN++ N ++ C +A +++ M G P+ ++ L G +
Sbjct: 76 KPNLWTYNTLVD-CLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAF 134
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
L + M E G Y+SLI G K+G + A + ME+ + TY
Sbjct: 135 TLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELL------EEMERHGCPPDVMTYS 188
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G ++G L Q+++ G D ++ A G D A +LDEM
Sbjct: 189 SLITGLGKDGETVKAFKLF---QEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G G+ Y + + K EA L+ ++ +G + DV Y LI I +
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHD 511
A + + M + +Y T++ GL + D + +P V
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVT---- 361
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
++++I A KA R+E A M + +P+ TY S+I A Q ++ E++
Sbjct: 362 YSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMR 421
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KG+ + +AFL +L +GG F ++ E +E + D Y
Sbjct: 422 -------GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATY 467
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 97/244 (39%), Gaps = 43/244 (17%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I++ G + A ++ EM A GC L Y + K + EA +L+ ++ +G
Sbjct: 50 LINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNG 109
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
DV Y+ LI + AF+LF +MRE +G
Sbjct: 110 CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRE------RG------------------- 144
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
V D T +NS+I+ K GR + A L M P+ TY SLI G
Sbjct: 145 -----CVPD------TFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITG 193
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
+ ++ E+KR +G K + A + AL K G D ++++++ +
Sbjct: 194 LGKDGETVKAFKLFQEMKR-------RGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246
Query: 614 EMKV 617
E V
Sbjct: 247 ERGV 250
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 111/504 (22%), Positives = 202/504 (40%), Gaps = 43/504 (8%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVH 146
A +F +T L P VT + + H ++D + ++ P ++ F T
Sbjct: 133 ALSTFGKITKLGLHPDV-VTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTT-- 189
Query: 147 TLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD-ICRKNSNFVAF--LKVFEE 203
L+ + A AL+ M ++ P ++ G +VD +C+K A L+ EE
Sbjct: 190 -LMNGLCREGRIVEAVALLDRMMEDG-LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
I PN+ +A ++ C + SDA+ + M G+ P+ ++ +
Sbjct: 248 VSHII---------PNVVIYSAIIDSLCKDGRH-SDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+ G +L M E S +V Y++LI+ +VK G A L G +
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNL 381
+ TY ++ GF + + ++ ++ + P+ I + +I
Sbjct: 358 PNT----ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT-----LIDGYCGA 408
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
D +L EM G Y + + A L+ ++ SSGL D+
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGS------------YLTIMTGLMENHRP 489
D L++ + + A +F+ M++++ DL S Y +++GL+ N
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSK-KDLDASHPFNGVEPDVQTYNILISGLI-NEGK 526
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
L A L E + + T ++S+I CK RL++A + M F PN T+ +
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 550 LINGYVTAEQYFSVLMMWHEIKRK 573
LINGY A + L ++ E+ R+
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRR 610
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 109/523 (20%), Positives = 207/523 (39%), Gaps = 47/523 (8%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
++ + T LH + + EA F + + P+ +L ++ L + A
Sbjct: 148 DVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTL---MNGLCREGRIVEAV 204
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
A + ++E + T T++ M A L++ M + + +P + ++D
Sbjct: 205 ALLDRMMEDGLQPTQI-TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIET 246
K+ +F E + E F P+++ N+ + G C SDAE++++
Sbjct: 264 SLCKDGRHSDAQNLFTE-----MQEKGIF--PDLFTYNSMIVGFCSS-GRWSDAEQLLQE 315
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVK 303
M + P+ ++ L + +G K E E L +E G + YSS+I G+ K
Sbjct: 316 MLERKISPDVVTYNALINAFVKEG---KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
L++A L M S T+ ++ G+ + L+ ++
Sbjct: 373 QNRLDAAEHMFYL------MATKGCSPNLITFNTLIDGYCGAKRIDDGMELL---HEMTE 423
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
+G+V D + +I +G + A +L EM + G + L C + +
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Query: 422 ATQL--VM-----DISSS----GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
A ++ VM D+ +S G++ DV Y+ LI I F A L+ +M I
Sbjct: 484 ALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 543
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLED 527
+Y +++ GL + R + D + P V + ++I+ +CKAGR++D
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT----FTTLINGYCKAGRVDD 599
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
M N TY++LI G+ L ++ E+
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 117/295 (39%), Gaps = 23/295 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++G C G + + D +++ M+ G+ + +++ L + + L G ++
Sbjct: 393 PNLITFNTLIDGYC-GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA---------SRTILLCLGGGNMEQSDF 328
L M G +V +L+ G G L+ A S+ L N + D
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLS 384
+TY ++ G + G +EA++L GIV D +I
Sbjct: 512 --QTYNILISGLINEGK-------FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A + D M + S + + + YCK R + +L ++ G+ + Y L
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
I + A +F++M + +Y + ++TGL + A L+++
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A LF DM +R + +M ++ RP+L+ + L + +E ++ + +N
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVIS-LYQKMERKQIRCDIYSFN 118
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+I FC +L A T ++ L P+ T+ +L++G ++ L ++H++
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQM 175
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 17/266 (6%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+K+ G+V + V ++ AC G S+KA +L EM G + Y + YCK+
Sbjct: 192 KKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKK 251
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
EA + + SG+ D+ Y++LI + A LFR ++ + + +Y
Sbjct: 252 SMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIKGVVMAN-HVTY 310
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
T++ G + + A L EV+E +NSI+ C+ GR+ +A R L M
Sbjct: 311 TTLIDGYCRMNDID-EALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY-A 595
+ EP++ T +LIN Y E S + ++K+K+ G K +D + Y A
Sbjct: 370 VKKIEPDNITCNTLINAYCKIEDMVSAV----KVKKKMIESGLK--------LDMYSYKA 417
Query: 596 LVKGGFFDAVMQVVEKSQEMKVFVDK 621
L+ G F V+++ +E+ ++K
Sbjct: 418 LIHG--FCKVLELDNAKEELFSMIEK 441
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 145/346 (41%), Gaps = 59/346 (17%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAE-KVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+KP++ AC L + ++D K+ + M LGV N + L + + G EK
Sbjct: 164 LKPHLQACTVLLNSLVK--ERLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEK 221
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLG-NLESASRTILLCLGGGNMEQSDFSKE-- 331
+L S M E G + Y++LIS Y K + E+ S ME+S + +
Sbjct: 222 AEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQ-------DRMERSGVAPDIV 274
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKL--EPSGIVVDRSVGFG-IISACVNLGLSDKAH 388
TY ++ GF + G ++ EA +L + G+V+ V + +I + D+A
Sbjct: 275 TYNSLIHGFSREGRMR-------EATRLFRKIKGVVMANHVTYTTLIDGYCRMNDIDEAL 327
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+ + M + G G+ Y L+ C++ R EA +L+ ++S ++ D + LI A
Sbjct: 328 RLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNITCNTLINAY 387
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+D SA + + M E +GL ++
Sbjct: 388 CKIEDMVSAVKVKKKMIE--------------SGL----------------------KLD 411
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ + ++IH FCK L++AK L MI P Y L++G+
Sbjct: 412 MYSYKALIHGFCKVLELDNAKEELFSMIEKGLSPGYSAYSWLVDGF 457
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 168/428 (39%), Gaps = 42/428 (9%)
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYF-MPFELWGGFLVDICRKNSNFV 195
P ++DF + T ++R T YF EL+G I +F
Sbjct: 69 PSIVDFTRLLTATANLRRYETVI-------------YFSQKMELYG-----ISHDLYSFT 110
Query: 196 AFLKVFEECCRI--ALDENLDFMK----PNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
+ F C R+ AL MK P+I + L G C + + DA ++ M
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCL-VNRIGDAFSLVILMVK 169
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G PN + L G +EL + M + G + +V Y++L++G G
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 310 ASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIV 365
A+R + +M + + + T+ ++ F++ GN+ L E ++P+ +
Sbjct: 230 AARML------RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+ + C++ L D A D M + GC + Y + +CK E +L
Sbjct: 284 YNSIIN----GLCMHGRLYD-AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+S G D+ Y+ LI + A +F M R+ ++ ++ GL
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
N E D++ E + + +N +IH CKA ++E A R+ +P+ +
Sbjct: 399 NGEIESALVKFDDMRESEKY-IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDAR 457
Query: 546 TYLSLING 553
TY +I G
Sbjct: 458 TYTIMILG 465
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 142/342 (41%), Gaps = 43/342 (12%)
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
M LG RP+ + G L + ++ V L M+ FGF +V Y+++I+G K +
Sbjct: 665 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 724
Query: 307 LESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPS 362
L +A + C ME+ + TY ++ G +G A L+ + +K++P+
Sbjct: 725 LNNALE-VFYC-----MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 778
Query: 363 GI------------------------VVDRSVGFGIISA-------CVNLGLSDKAHSIL 391
I ++ RSV + + C++ L D A +
Sbjct: 779 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD-AKYMF 837
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
D M + GC + Y + +CK R + +L +++ GL D Y+ LI +
Sbjct: 838 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 897
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
A +F M + + +Y ++ L N + E A + E ++ ++V
Sbjct: 898 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE-KALVMVEDLQKSEMDVDIIT 956
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N II C+ +L++A R + +P+ Y+++I+G
Sbjct: 957 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 998
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 119/297 (40%), Gaps = 35/297 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N + G C + +++A +V M G+R + ++ L + G
Sbjct: 707 PNVVIYNTVINGLCKN-RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 765
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNL--------ESASRTILL------------- 316
L M + ++F+++LI +VK GNL E R+++
Sbjct: 766 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 825
Query: 317 ---CLGGGN-MEQSDFSKE------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
CLG M SK TY ++ GF ++ V+ L E + G+V
Sbjct: 826 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE---MTYQGLVG 882
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D +I G + A + + M CG S + Y L C + +A +V
Sbjct: 883 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 942
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
D+ S + +D+ Y+ +I+ + + A+ LFR + + +Y+T+++GL
Sbjct: 943 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 999
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 138/336 (41%), Gaps = 27/336 (8%)
Query: 253 RPNESSFGFLAYLYALKGLQ--EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
+P S F L A L+ E ++ M +G S + ++ LI + + L A
Sbjct: 66 QPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFA 125
Query: 311 SRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVV 366
+ G M + + S T+ ++ GF + +L+I K EP+ +V
Sbjct: 126 LSVL------GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+ +I G + A +L+EM G + Y L C R ++A +++
Sbjct: 180 NT-----LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
D+ + DV + ALI+ + + A L+++M ++ + +Y +I+ GL +
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 487 HRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
R D + P V +N++I FCK +++ + +RM F +
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVT----YNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 544 DQTYLSLINGYVTAEQYFSVL--MMWHEIKRKISTD 577
TY +LI+GY + L W + R+++ D
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWM-VSRRVTPD 385
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 166/431 (38%), Gaps = 67/431 (15%)
Query: 65 QDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKR 124
+ +I +L + L+ N EA S+ P+ + N++I L +D +N
Sbjct: 671 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 730
Query: 125 AFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFL 184
F Y +EK D T +TL+ + N+ A L++ M K R P ++ L
Sbjct: 731 VF----YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK-RKIDPNVIFFTAL 785
Query: 185 VDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEG-CCYGLQSVSDAEKV 243
+D K N + +++E R ++ PN++ N+ + G C +G + DA+ +
Sbjct: 786 IDTFVKEGNLLEARNLYKEMIRRSV-------VPNVFTYNSLINGFCIHG--CLGDAKYM 836
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+ M G P+ ++ L + E ++L M G Y++LI GY +
Sbjct: 837 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 896
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
G L N+ Q F++ C V
Sbjct: 897 AGKL--------------NVAQKVFNRMVDCGVSPDI----------------------- 919
Query: 364 IVVDRSVGFGIISACV-NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
V + I+ C+ N G +KA +++++ V + Y ++ C+ + EA
Sbjct: 920 ------VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 973
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE------ARIYD--LKG 474
L ++ G++ D Y +I + A L R M+E RIYD L+
Sbjct: 974 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRD 1033
Query: 475 SYLTIMTGLME 485
Y ++ L++
Sbjct: 1034 HYTSLSAELIK 1044
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 158/405 (39%), Gaps = 55/405 (13%)
Query: 65 QDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKR 124
+ +I + + LH L N +A+ + + P+ V N+LI L N L
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI---DGLCKNGELNI 194
Query: 125 AFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFL 184
A ++ +EK D T +TLL + + + A +++ M K R P + L
Sbjct: 195 AL-ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK-RSINPDVVTFTAL 252
Query: 185 VDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVI 244
+D+ K N ++++E + ++D PN N+ + G C + DA+K
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVD-------PNNVTYNSIINGLCMH-GRLYDAKKTF 304
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
+ M+ G PN ++ L + + ++ ++L M+ GF++ + Y++LI GY ++
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
G L A + C D T+C ++ G NG ++
Sbjct: 365 GKLRVALD--IFCWMVSRRVTPDII--THCILLHGLCVNGEIE----------------- 403
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
SA V D+M +G+ Y + CK + +A +
Sbjct: 404 -----------SALVK----------FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWE 442
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
L + G++ D Y +I + + A L R M+E I
Sbjct: 443 LFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 10/266 (3%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A S++D M+ G + +Y + CK A ++ + G++ D Y+ LI
Sbjct: 692 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 751
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
S + A L RDM + +I D + T + L A L + + V
Sbjct: 752 SGLSNSGRWTDAARLLRDMVKRKI-DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 810
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
+NS+I+ FC G L DAK M+ P+ TY +LI G+ +++ +
Sbjct: 811 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 870
Query: 566 MWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYK 625
++ E ++ G G F +N ++ + G + +V + + V D Y
Sbjct: 871 LFCE----MTYQGLVGDAFTYN---TLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 923
Query: 626 QAF--MENHKKLKVAKLRKRNFKKME 649
+ N+ K++ A + + +K E
Sbjct: 924 ILLDCLCNNGKIEKALVMVEDLQKSE 949
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
S F+ AF+LF +M ++ + ++T R E + F + +E + +
Sbjct: 49 SIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYF-SQKMELYGISHDLY 107
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ +IH FC+ RL A L +M+ L +EP+ T+ SL++G+
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGF 151
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 159/349 (45%), Gaps = 29/349 (8%)
Query: 216 MKPNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--Q 272
M N++ N ++G C G+ +S A +++++ G+ P+ ++ L + GL
Sbjct: 247 MCSNLFTFNIFIQGLCRKGM--LSGAMSMLDSVIREGLTPDVVTYNTL-----ICGLCKN 299
Query: 273 EKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLGGGNMEQSD 327
+VE E +++ G Y++LI GY K+G L++A + + +C G +
Sbjct: 300 SNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKG---FVPDE 356
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSD 385
F TYC ++ G QN + L A + L+P+ I+ + +I GL
Sbjct: 357 F---TYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNM-----LIKGLCQEGLIL 408
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A +++EM+ GCS + Y + CK ++A L+ D + G DV ++ LI
Sbjct: 409 QALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLI 468
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ ++ + M + +Y +++ GL + + E + + +VE V
Sbjct: 469 DGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCV 528
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
K +N + + CKAG++ +A + ++ P+ ++ ++I+G+
Sbjct: 529 PNKI-TYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGF 576
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 107/240 (44%), Gaps = 10/240 (4%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A+ + ++M G + + L CK+ E+ +L+ + G+ ++ ++ I
Sbjct: 199 EAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFI 258
Query: 446 EASITSQDFQSAFSLFRD-MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
+ A S+ +RE D+ +Y T++ GL +N +L ++V +
Sbjct: 259 QGLCRKGMLSGAMSMLDSVIREGLTPDVV-TYNTLICGLCKNSNVVEAEKYLHKLV-NGG 316
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+E +N++I +CK G L++A++ L+ I F P++ TY SLING ++ L
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRAL 376
Query: 565 MMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+++ KG+K L + + L + G +Q++ + E D W Y
Sbjct: 377 ALFNAAL-------GKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTY 429
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 107/514 (20%), Positives = 194/514 (37%), Gaps = 79/514 (15%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTV 145
EA++ F + +FP N L+ L + +R V+ K + T
Sbjct: 199 EAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVL----KKGMCSNLFTF 254
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECC 205
+ + + + A +++ + + + + +C KNSN V K +
Sbjct: 255 NIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLC-KNSNVVEAEKYLHKLV 313
Query: 206 RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF------ 259
L+ P+ + N ++G C + + +AEK+++ G P+E ++
Sbjct: 314 NGGLE-------PDGFTYNTLIDGYC-KMGMLQNAEKILQGAICKGFVPDEFTYCSLING 365
Query: 260 ------------------------GFLAYLYALKGLQEKIVELESL-----MNEFGFSSQ 290
+ Y +KGL ++ + L++L M+E G SS
Sbjct: 366 LCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSD 425
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF--LQNGNVKG 348
+ Y+ +I+G K+G C+ N +D + Y V F L +G K
Sbjct: 426 IWTYNLVINGLCKMG-----------CVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQ 474
Query: 349 LA--NLIIEAQKLEPSGIVVD----RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
L I K+ G+ D SV G+ A N L + +++++ GC
Sbjct: 475 LKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEK----GCVPN 530
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
Y ++ CK + EA LV +I + G+ D ++ +I + D + A+ LFR
Sbjct: 531 KITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFR 590
Query: 463 DMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV----EDPRVEVKTHDWNSIIHA 518
M E K S+ T +M N E + + E + T+ + +I
Sbjct: 591 RMGE----QYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDG 646
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
FC G + + L MI F P+ T+ +IN
Sbjct: 647 FCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVIN 680
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 9/224 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQEKIV 276
P++ N+ L G +++ D + ETM G PN+ ++ L G + E +
Sbjct: 494 PDVITYNSVLNGLSKAVKN-EDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALD 552
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
++ ++N+ G + V ++++ISG+ G+L+ A + L G + + TY +
Sbjct: 553 LVDEILNK-GITPDTVSFATIISGFANNGDLKGAYQ---LFRRMGEQYKVSHTTATYNIM 608
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ F + ++ L +E + G D +I G +D + L EM
Sbjct: 609 INAFAEKLDLHMGEKLFLE---MGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIE 665
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G L + + C +HR EA ++ + +G+ +V N
Sbjct: 666 KGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVN 709
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 127/285 (44%), Gaps = 12/285 (4%)
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
G+ E+++ + M E G + Y+ L++G V +ESA R + ME
Sbjct: 193 GMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEV------MENGKIG 246
Query: 330 KE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
+ TY ++KG+ + G + + + +E + D+ +I AC G D
Sbjct: 247 PDVVTYNTMIKGYCEVGKTR---KAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSC 303
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ EM+ G + VY + CK+ + E + ++ S G + +V Y ALI++
Sbjct: 304 LGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDS 363
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ + A LF+ M++ + + +Y I+ L ++ R + ++ E V V
Sbjct: 364 NAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYM-EFCSGKGVAV 422
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++S+I K+GR+++A+R M+ P+ Y +LI+
Sbjct: 423 NAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALID 467
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 160/441 (36%), Gaps = 60/441 (13%)
Query: 88 WKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHT 147
W+ K N + PS N L+ L + + + +R F V+E D T +T
Sbjct: 202 WRRMKE---NGIEPSLFSYNFLVNGLVNSKFIESAERVFE----VMENGKIGPDVVTYNT 254
Query: 148 LLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRI 207
++ AF +K M + R P ++ L+ C +F + L ++ E
Sbjct: 255 MIKGYCEVGKTRKAFEKLKAM-ELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHE---- 309
Query: 208 ALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
+DE + P++Y+ + G C + V + V E M G + N + + L A
Sbjct: 310 -MDEKGLEIPPHVYS--LVIGGLCKDGKRV-EGYTVFENMISKGCKANVAIYTALIDSNA 365
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
G + + L M + G V Y +++ K G L+ A + C G G +
Sbjct: 366 KCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAM 425
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
F Y ++ G ++G V D+A
Sbjct: 426 F----YSSLIDGLGKSGRV--------------------------------------DEA 443
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
I EM GC Y + A K + EA L + G V Y LI
Sbjct: 444 ERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITG 503
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ A +L+ M + I ++ + TGL + + LDE+ P +
Sbjct: 504 LFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMA--PMGVI 561
Query: 508 KTHDWNSIIHAFCKAGRLEDA 528
++ +I+ CKAGR+++A
Sbjct: 562 PETAFDDMINILCKAGRIKEA 582
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GL + V + ++LI++ + ++R M+E I SY ++ GL+ + E
Sbjct: 174 GLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIE-S 232
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
A + EV+E+ ++ +N++I +C+ G+ A L+ M P+ TY++LI
Sbjct: 233 AERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQ 292
Query: 553 GYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
+ S L ++HE+ +KG++ + +Y+LV GG
Sbjct: 293 ACYAEGDFDSCLGLYHEMD-------EKGLE-----IPPHVYSLVIGGL 329
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 117/283 (41%), Gaps = 43/283 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN Y N + CC L + A V E M +G PN +S+ L Y KGL ++
Sbjct: 236 PNSYTLNLVICACC-KLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMK 294
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L S+M + G +V +++L++G+ K+G L+ AS+
Sbjct: 295 LRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLF----------------------- 331
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G +KG++ L P+ + + +I+ G + + + +EM+
Sbjct: 332 ------GEMKGMS--------LSPTTVTYNI-----LINGYSKAGNCEMGNRLFEEMSRF 372
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
+ Y + CKE +T +A LV ++ GL + + ALI + + A
Sbjct: 373 QVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERA 432
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
F +++ M ++ ++ +++ EN + L+E++
Sbjct: 433 FQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEML 475
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 5/188 (2%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I AC LG DKA+ + +EM G S + Y + YC + + A +L + +G
Sbjct: 244 VICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNG 303
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ DV ++ L+ Q A LF +M+ + +Y ++ G + E+
Sbjct: 304 VPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGN 363
Query: 494 AFLDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+E+ R +VK +N++I CK G+ + A +R + PN T+ +LI
Sbjct: 364 RLFEEM---SRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420
Query: 552 NGYVTAEQ 559
G +Q
Sbjct: 421 YGQCVQKQ 428
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
+D L + + F++A F M++ S ++ L+ R ++ AF E+
Sbjct: 171 FDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMR 230
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
R+ ++ N +I A CK GRL+ A M + F PN +Y +LI GY
Sbjct: 231 RS-RIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGY 283
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 147/343 (42%), Gaps = 21/343 (6%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ A L+G C L V +A K+++ MS+ G PN+ + L G ++
Sbjct: 637 RPNVVIYGALLDGFC-KLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 695
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
E+++ M+E GF + + YSSLI Y K+ + AS+ + M ++ + Y
Sbjct: 696 EVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL------SKMLENSCAPNVVIYT 749
Query: 335 EVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSIL 391
E++ G + G L ++E + +P+ + + GFG +G + +L
Sbjct: 750 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG------RIGKIETCLELL 803
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+ M + G + Y + CK A L+ ++ + Y +IE +
Sbjct: 804 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEG--FN 861
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK-TH 510
++F + L ++ + Y ++ L++ R E+ L+EV V +
Sbjct: 862 KEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSS 921
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+NS+I + C A +++ A R M P QT+ SLI G
Sbjct: 922 TYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKG 964
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 174/454 (38%), Gaps = 78/454 (17%)
Query: 190 KNSNFVA----FLKVFEECCRIAL-DENLDFMK--------PNIYACNAALEGCCYGLQS 236
+ NFV + K+ C +L +E +DF+ PN+ + L GC +
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC-LNKKQ 352
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ ++V+ M + G P+ F L + Y G +L M + G + V Y+
Sbjct: 353 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNI 412
Query: 297 LISGY--------------------------VKLGNLESASRTILLCLGGGNMEQSDFSK 330
LI V L + +S T LC G + +
Sbjct: 413 LIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472
Query: 331 E-----------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
E TY +V+ G+L N + LA L+ E K G+V D ++ +
Sbjct: 473 EMIGQGFIPDTSTYSKVL-GYLCNASKMELAFLLFEEMK--RGGLVADVYTYTIMVDSFC 529
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
GL ++A +EM GC+ + Y + AY K + + A +L + S G ++
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y ALI+ + + A +F M ++ Y + D+
Sbjct: 590 TYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYF---------------KQYDDDN 634
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
E P V + + +++ FCK R+E+A++ L M EPN Y +LI+G +
Sbjct: 635 SERPNVVI----YGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 690
Query: 560 YFSVLMMWHEIKRKISTDGQKGIKFEH-NLVDAF 592
L E+K ++S G + + +L+D +
Sbjct: 691 ----LDEAQEVKAEMSEHGFPATLYTYSSLIDRY 720
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 166/398 (41%), Gaps = 42/398 (10%)
Query: 178 ELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDF-MKPN--IYAC--NAALEGCCY 232
E++G FL + RK +F EE R+ DF +P+ Y C A L+ C
Sbjct: 197 EVFGEFLNVLVRKYCRSGSFSIALEELGRLK-----DFRFRPSRSTYNCLIQAFLKADC- 250
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV 292
+ A V MS+ +R + F Y Y+L + K E +LM F V
Sbjct: 251 ----LDSASLVHREMSLANLRMD--GFTLRCYAYSLCKVG-KWREALTLMETENFVPDTV 303
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFL---QNGNVK 347
FY+ LISG + E A + M + TY ++ G L Q G K
Sbjct: 304 FYTKLISGLCEASLFEEAMDFL------NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
+ N+++ + PS + + ++ A G A+ +L +M CG + G VY
Sbjct: 358 RVLNMMM-MEGCYPSPKIFN-----SLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYN 411
Query: 408 PTLKAYCKE------HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ + C + H A + ++ ++G+ L+ N + ++ ++ AFS+
Sbjct: 412 ILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVI 471
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
R+M +Y ++ L + EL +E+ V + + ++ +FCK
Sbjct: 472 REMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLV-ADVYTYTIMVDSFCK 530
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
AG +E A++ M + PN TY +LI+ Y+ A++
Sbjct: 531 AGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 142/395 (35%), Gaps = 68/395 (17%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLM------------ 282
+ VS A ++ ETM G PN ++ L + G EK ++ M
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMY 626
Query: 283 -----NEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
++ +V Y +L+ G+ KL +E A + L +ME + ++ Y ++
Sbjct: 627 FKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKL----LDAMSMEGCEPNQIVYDALI 682
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
G + G + EAQ+++ G +I + D A +L +
Sbjct: 683 DGLCKVGKLD-------EAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 735
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M C+ + +Y + CK +T EA +L+ + G Q +V Y A+I+
Sbjct: 736 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGK 795
Query: 454 FQSAFSLFRDMREARI------------YDLKGSYLTIMTGLME----NHRPELMAAF-- 495
++ L M + + K L + L+E H P A +
Sbjct: 796 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRK 855
Query: 496 ---------------LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
LDE+ +D + + ++ KA RLE A R L +
Sbjct: 856 VIEGFNKEFIESLGLLDEIGQDDTAPFLSL-YRLLVDNLIKAQRLEMALRLLEEVATFSA 914
Query: 541 EPND--QTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
D TY SLI A + ++ E+ +K
Sbjct: 915 TLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKK 949
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 119/308 (38%), Gaps = 25/308 (8%)
Query: 276 VELESL--MNEFGFSSQMVFYSSLISGYVKLGNLESAS---RTILLCLGGGNMEQSDFSK 330
+ LE L + +F F Y+ LI ++K L+SAS R + L N+ F+
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL----ANLRMDGFTL 273
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
Y + G + A ++E + P + + +IS L ++A
Sbjct: 274 RCY---AYSLCKVGKWRE-ALTLMETENFVPDTVFYTK-----LISGLCEASLFEEAMDF 324
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L+ M A C + Y L + + +++ + G +++L+ A T
Sbjct: 325 LNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT 384
Query: 451 SQDFQSAFSLFRDMREAR------IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
S D A+ L + M + +Y++ + + H EL E++
Sbjct: 385 SGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGV 444
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
V K + +S C AG+ E A +R MI F P+ TY ++ A +
Sbjct: 445 VLNKI-NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAF 503
Query: 565 MMWHEIKR 572
+++ E+KR
Sbjct: 504 LLFEEMKR 511
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 157/367 (42%), Gaps = 51/367 (13%)
Query: 216 MKPNIYACNAALEG-CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
M P+I + N+ + G CC G +++++++ M G++P+ +F L +G +
Sbjct: 246 MIPSIISYNSLIHGFCCAG--KWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIE 303
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+L +M E G +V Y+SLI G+ +G+L SA R + + + E S Y
Sbjct: 304 AKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSA-RELFVSMPSKGCEPDVIS---YN 359
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKL--EPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ G+ + V+ L E + P+ I D S+ GI A G D A +
Sbjct: 360 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYD-SLLKGIFLA----GKVDDAKKLFS 414
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M A G + Y L CK EA +L ++ SS +L++ N + LI+ +
Sbjct: 415 VMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAG 474
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
++A+ LF + E H P ++ +
Sbjct: 475 KLETAWELFEKLSN------------------EGHEPNVVT------------------Y 498
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+IH FC+ G+++ A +++M P+ TY +L+ G+ + + V+ + H + +
Sbjct: 499 TIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQ 558
Query: 573 K-ISTDG 578
K +S D
Sbjct: 559 KDVSPDA 565
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 174/430 (40%), Gaps = 33/430 (7%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T++ LL + N N FA + + Y + + +C ++
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHR-------- 154
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETM------SVLGVRP 254
E R+ L P++ ++G C G +++ A K+ + M + +P
Sbjct: 155 ISEATRLFLRMQKLGCTPDVVTYGTLIKGLC-GTGNINIALKLHQEMLNDISRYEINCKP 213
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
N ++ + G +++ +L M G ++ Y+SLI G+ G E + R +
Sbjct: 214 NVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLL 273
Query: 315 LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE----PSGIVVDRSV 370
L G Q D T+ ++ + G V IEA+KL SGIV D
Sbjct: 274 DEMLDQG--LQPDMV--TFNVLIDTLCKEGKV-------IEAKKLLGVMIESGIVPDLVT 322
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
+I +G + A + M + GC + Y + Y K + EA +L ++
Sbjct: 323 YNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEML 382
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP- 489
G + +V YD+L++ + A LF M+ I + +Y + GL +N
Sbjct: 383 LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF 442
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
E M F + + ++E++ + N +I CKAG+LE A ++ EPN TY
Sbjct: 443 EAMKLFTELKSSNFKLEIE--NLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTI 500
Query: 550 LINGYVTAEQ 559
+I+G+ Q
Sbjct: 501 MIHGFCREGQ 510
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 45/224 (20%)
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G S + Y +K C EHR +EAT+L + + G DV Y LI+ + + A
Sbjct: 134 GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIA 193
Query: 458 FSLFRDM-REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
L ++M + Y++ N +P ++ +N I+
Sbjct: 194 LKLHQEMLNDISRYEI-------------NCKPNVIT------------------YNIIV 222
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
CK GR ++AK+ M P+ +Y SLI+G+ A + W E KR +
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGK-------WEESKRLLDE 275
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
+G++ + + + L K G +V+E + + V ++
Sbjct: 276 MLDQGLQPDMVTFNVLIDTLCKEG------KVIEAKKLLGVMIE 313
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 147/343 (42%), Gaps = 21/343 (6%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ A L+G C V +A K+++ MS+ G PN+ + L G ++
Sbjct: 636 RPNVVTYGALLDGFCKS-HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
E+++ M+E GF + + YSSLI Y K+ + AS+ + M ++ + Y
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL------SKMLENSCAPNVVIYT 748
Query: 335 EVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSIL 391
E++ G + G L ++E + +P+ + + GFG+I G + +L
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI------GKIETCLELL 802
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+ M + G + Y + CK A L+ ++ + Y +IE +
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG--FN 860
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK-TH 510
++F + L ++ + Y ++ L++ R E+ L+EV V +
Sbjct: 861 KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 920
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+NS+I + C A ++E A + M P Q++ SLI G
Sbjct: 921 TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 963
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 172/447 (38%), Gaps = 79/447 (17%)
Query: 195 VAFLKVFEECCRIAL-DENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIE 245
V + K+ C +L +E +DF+ PN+ + L GC + + ++V+
Sbjct: 303 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC-LNKKQLGRCKRVLN 361
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY----------- 294
M + G P+ F L + Y G +L M + G V Y
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421
Query: 295 ---------------SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-------- 331
S +++ V L + +S T LC G + +E
Sbjct: 422 DSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 481
Query: 332 ---TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY +V+ +L N + LA L+ E K G+V D ++ + GL ++A
Sbjct: 482 DTSTYSKVL-NYLCNASKMELAFLLFEEMK--RGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+EM GC+ + Y + AY K + + A +L + S G ++ Y ALI+
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF--LDEVVEDPRVE 506
+ + A +F M ++ P++ F D+ E P V
Sbjct: 599 CKAGQVEKACQIFERMCGSK------------------DVPDVDMYFKQYDDNSERPNVV 640
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+ +++ FCK+ R+E+A++ L M EPN Y +LI+G + L
Sbjct: 641 T----YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK----LDE 692
Query: 567 WHEIKRKISTDGQKGIKFEH-NLVDAF 592
E+K ++S G + + +L+D +
Sbjct: 693 AQEVKTEMSEHGFPATLYTYSSLIDRY 719
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 161/394 (40%), Gaps = 34/394 (8%)
Query: 178 ELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDF-MKPNIYACNAALEGCCYGLQS 236
E++G FL + RK+ +F EE R+ DF +P+ N ++
Sbjct: 197 EVFGEFLNVLVRKHCRNGSFSIALEELGRLK-----DFRFRPSRSTYNCLIQAFLKA-DR 250
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ A + MS+ +R + + AY G K E +L+ F VFY+
Sbjct: 251 LDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG---KWREALTLVETENFVPDTVFYTK 307
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFL---QNGNVKGLAN 351
LISG + E A + M + TY ++ G L Q G K + N
Sbjct: 308 LISGLCEASLFEEAMDFL------NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
+++ + PS + + ++ A G A+ +L +M CG G VY +
Sbjct: 362 MMM-MEGCYPSPKIFN-----SLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG 415
Query: 412 AYCKEHRTAEATQLVM------DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
+ C + + L + ++ ++G+ L+ N + ++ ++ AFS+ R+M
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+Y ++ L + EL +E+ V + + ++ +FCKAG +
Sbjct: 476 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV-ADVYTYTIMVDSFCKAGLI 534
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
E A++ M + PN TY +LI+ Y+ A++
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 122/317 (38%), Gaps = 43/317 (13%)
Query: 276 VELESL--MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ LE L + +F F Y+ LI ++K L+SAS I + N+ F+ +
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSAS-LIHREMSLANLRMDGFTLRCF 276
Query: 334 ----CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
C+V K A ++E + P + + +IS L ++A
Sbjct: 277 AYSLCKVGKW--------REALTLVETENFVPDTVFYTK-----LISGLCEASLFEEAMD 323
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
L+ M A C + Y L + + +++ + G +++L+ A
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 450 TSQDFQSAFSLFRDMREAR------IYDL--------KGSYLTIMTGLMENHRPELMAAF 495
TS D A+ L + M + +Y++ K S + L E E++AA
Sbjct: 384 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA- 442
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
V + + +S C AG+ E A +R MI F P+ TY ++N
Sbjct: 443 --------GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 556 TAEQYFSVLMMWHEIKR 572
A + +++ E+KR
Sbjct: 495 NASKMELAFLLFEEMKR 511
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 148/397 (37%), Gaps = 73/397 (18%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK-------------IVELESL 281
+ VS A ++ ETM G PN ++ L + G EK + +++
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Query: 282 MNEFGFSSQ---MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
++ +S+ +V Y +L+ G+ K +E A + L +ME + ++ Y ++
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL----LDAMSMEGCEPNQIVYDALID 682
Query: 339 GFLQNGNVKGLANLIIEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
G + G + EAQ+++ G +I + D A +L +M
Sbjct: 683 GLCKVGKLD-------EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
C+ + +Y + CK +T EA +L+ + G Q +V Y A+I+
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795
Query: 455 QSAFSLFRDMREARI------------YDLKGSYLTIMTGLME----NHRPELMAAF--- 495
++ L M + + K L + L+E H P A +
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 496 --------------LDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
LDE+ +D P + V + +I KA RLE A R L +
Sbjct: 856 IEGFNKEFIESLGLLDEIGQDDTAPFLSV----YRLLIDNLIKAQRLEMALRLLEEVATF 911
Query: 539 QFEPND--QTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
D TY SLI A + + ++ E+ +K
Sbjct: 912 SATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK 948
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 8/220 (3%)
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A ++ EM G + Y +K CK R+AEA + ++ G D+ Y A I+
Sbjct: 546 ALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAID 605
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ + A +FRD+ +Y T++ G + R LDE+V V
Sbjct: 606 GFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVP 665
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+N +I +CK G ++ A L RM+ + EPN TY +LI+G A + + +
Sbjct: 666 -SVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHL 724
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVM 606
W+E++ K + + I F A ++ L K G+ DA +
Sbjct: 725 WNEMRGKGCSPNR--ISFI-----ALIHGLCKCGWPDAAL 757
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 10/186 (5%)
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
I V + D+A I ++ A G + Y + +CK R +EA ++ ++ + GL
Sbjct: 604 IDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGL 663
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDM----REARIYDLKGSYLTIMTGLMENHRPE 490
V Y+ LI+ + D AF M RE + +Y T++ GL RP+
Sbjct: 664 VPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVI----TYTTLIDGLCNAGRPD 719
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+E + + ++IH CK G + A R M + P+ Y++L
Sbjct: 720 DAIHLWNE-MRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGERE-TPDTIVYVAL 777
Query: 551 INGYVT 556
I +++
Sbjct: 778 ITSFIS 783
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G DKA +++ M G + + + + ++ R +A QL + SG DV Y
Sbjct: 282 GEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVY 341
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL-MAAFLDEVV 500
DALI ++ + A L +M+E I + I++ L+ E+ + ++E +
Sbjct: 342 DALIGGLCAKKEIEKALHLLSEMKELGI----DPDIQILSKLIAYCSEEVDIYRLIEERL 397
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
ED E +NS+++ ++ A LR M
Sbjct: 398 EDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAM 432
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
++ SG + D ++++A S+ F A S+F ++ D G L+I+ L +
Sbjct: 224 EMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVD--GHVLSILV-LTFSK 280
Query: 488 RPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
E+ AF L E +ED + + + +IH F + R++ A + ++M F P+
Sbjct: 281 CGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSV 340
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIK 571
Y +LI G ++ L + E+K
Sbjct: 341 YDALIGGLCAKKEIEKALHLLSEMK 365
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 170/408 (41%), Gaps = 40/408 (9%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ N L G C +++ E +++ G GFL + V
Sbjct: 173 QPDVVTFNTLLHGLCL-------EDRISEALALFGYMVET---GFL-----------EAV 211
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L M E G + ++ +++LI+G G + A+ + +G G TY +
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG----LHIDVVTYGTI 267
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V G + G+ K NL+ K+E + I D + II G A + EM
Sbjct: 268 VNGMCKMGDTKSALNLL---SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + + Y + +C R ++A +L+ D+ + DV ++ALI AS+
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A L +M I+ +Y +++ G +++R + D ++ P V +N+II
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD-LMASPDVVT----FNTII 439
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+C+A R+++ + LR + N TY +LI+G+ + + ++ E+ IS
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM---IS- 495
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
G+ + + LY + + +++ E Q K+ +D Y
Sbjct: 496 ---HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 111/560 (19%), Positives = 208/560 (37%), Gaps = 113/560 (20%)
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
G++V+ + F+ + +F++ I L P + N + G C V +A
Sbjct: 200 GYMVE-----TGFLEAVALFDQMVEIGL-------TPVVITFNTLINGLCLE-GRVLEAA 246
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
++ M G+ + ++G + G + + L S M E +V YS++I
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNG---NVKGLANLIIEAQK 358
K G+ A L G + + F TY ++ GF G + + L +IE ++
Sbjct: 307 CKDGHHSDAQYLFSEMLEKG-IAPNVF---TYNCMIDGFCSFGRWSDAQRLLRDMIE-RE 361
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM-NAC-------------------- 397
+ P + + +ISA V G +A + DEM + C
Sbjct: 362 INPDVLTFN-----ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 398 ----------GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
S + + + YC+ R E QL+ +IS GL + Y+ LI
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ +A LF++M + + ++ G EN + E A L EV++ ++++
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE-EALELFEVIQMSKIDL 535
Query: 508 KTHDWNSIIHAFCKAGRLE-----------------------------------DAKRTL 532
T +N IIH CK +++ DA
Sbjct: 536 DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF 595
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF-------- 584
+M EP++ TY +LI G + A + + + E++ ++G G F
Sbjct: 596 HKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR----SNGFSGDAFTIKMAEEI 651
Query: 585 -----EHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKW--KYKQAFMENHKKLKV 637
+ +++ +L + G VVE ++E+ V+ W + A + N +
Sbjct: 652 ICRVSDEEIIENYLRPKINGETSSIPRYVVELAEELYT-VEPWLLPRQTAPILNPGEWFY 710
Query: 638 AKLRKRNFKKMEALIAFKNW 657
R R + +E + +W
Sbjct: 711 FGKRNRKYSNLEGVHCEGSW 730
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 21/180 (11%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I V + D A S+ +M + + + +K +C H+ + + ++ G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
Q DV ++ L+ A +LF M E TG +E
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVE--------------TGFLE------AV 211
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A D++VE V +N++I+ C GR+ +A + +M+ + TY +++NG
Sbjct: 212 ALFDQMVEIGLTPVVI-TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 270
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 191/475 (40%), Gaps = 65/475 (13%)
Query: 110 IAHLSSLQDNHNLKRAFASVVYVIEKNPKL---LDFQTVHTLLGSMRNANTAAPAFALVK 166
I LSSL + + + + V ++++ ++ D T TL+ + N A+ A ALV
Sbjct: 79 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138
Query: 167 CMFKNRYFMPFELWGGFLVD-ICRKNSNFVAF-LKVFEECCRIALDENLDFMKPNIYACN 224
M + R P + G +V+ +C++ +AF L E +I D + N
Sbjct: 139 RMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD---------VVIFN 188
Query: 225 AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE 284
++ C + V DA + + M G+RPN ++ L G +L S M E
Sbjct: 189 TIIDSLC-KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 247
Query: 285 FGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS-DFSKETYCEVVKGFLQN 343
+ +V +++LI +VK G A + L +++S D TY ++ GF +
Sbjct: 248 KKINPNLVTFNALIDAFVKEGKFVEAEK-----LHDDMIKRSIDPDIFTYNSLINGFCMH 302
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
+ DKA + + M + C L
Sbjct: 303 DRL--------------------------------------DKAKQMFEFMVSKDCFPDL 324
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y +K +CK R + T+L ++S GL D Y LI+ D +A +F+
Sbjct: 325 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 384
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M + +Y ++ GL N + E D ++ +++ + + ++I CKAG
Sbjct: 385 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQKSEIKLDIYIYTTMIEGMCKAG 443
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
+++D + +PN TY ++I+G + +L + + +K+ DG
Sbjct: 444 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR----LLQEAYALLKKMKEDG 494
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 140/338 (41%), Gaps = 46/338 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+I ++ L G C+G + +SDA +++ M +G RP+ +F L + L + V
Sbjct: 76 EPSIVTLSSLLNGYCHG-KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 134
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L M + G +V Y +++G K G+++ A
Sbjct: 135 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA-------------------------- 168
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
NL+ K+E + I D + II + D A ++ EM
Sbjct: 169 -------------FNLL---NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 212
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + Y + C R ++A+QL+ D+ + ++ ++ALI+A + F
Sbjct: 213 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 272
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV-EDPRVEVKTHDWNSI 515
A L DM + I +Y +++ G + R + + +V +D ++ T +N++
Sbjct: 273 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT--YNTL 330
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
I FCK+ R+ED R M + TY +LI G
Sbjct: 331 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 368
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 124/316 (39%), Gaps = 22/316 (6%)
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
L+D K FV K+ ++ + ++D P+I+ N+ + G C + A+++
Sbjct: 260 LIDAFVKEGKFVEAEKLHDDMIKRSID-------PDIFTYNSLINGFCMH-DRLDKAKQM 311
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
E M P+ ++ L + E EL M+ G V Y++LI G
Sbjct: 312 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 371
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
G+ ++A + + G D TY ++ G NG ++ + QK E
Sbjct: 372 DGDCDNAQKVFKQMVSDG--VPPDIM--TYSILLDGLCNNGKLEKALEVFDYMQKSE--- 424
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
I +D + +I G D + ++ G + Y + C + EA
Sbjct: 425 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 484
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
L+ + G D G Y+ LI A + D ++ L R+MR R G TI GL
Sbjct: 485 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV---GDASTI--GL 539
Query: 484 MEN--HRPELMAAFLD 497
+ N H L +FLD
Sbjct: 540 VANMLHDGRLDKSFLD 555
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 182/414 (43%), Gaps = 26/414 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+++ N + C+ L ++ + V+ + LG +PN + L LKG +K
Sbjct: 41 IEPDLFTLNILINCFCH-LGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKS 99
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--Y 333
+ + GF V Y++L++G K+G SA + + + +E Y
Sbjct: 100 LHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRM------IEDRSTRPNVVMY 153
Query: 334 CEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ G ++ V +L ++A+ + P+ ++ ++ +G A G +A +L
Sbjct: 154 NTIIDGLCKDKLVNEAYDLYSEMDARGIFPN-VITYSTLIYGFCLA----GQLMEAFGLL 208
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+EM + + Y + A CKE + EA L+ ++ G++ +V +Y+ L++
Sbjct: 209 NEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLI 268
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ Q+A +F M + + SY ++ L ++ R + L EV+ V T
Sbjct: 269 GEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVP-NTVT 327
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND-QTYLSLINGYVTAEQYFSVLMMWHEI 570
++S+I FCK GR+ A L+ M + + +P D TY SL++ + ++ ++
Sbjct: 328 YSSLIDGFCKLGRITSALDLLKEM-YHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 386
Query: 571 KRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
K ++GI+ A + L KGG ++ + ++ W Y
Sbjct: 387 K-------ERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTY 433
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 43/329 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ N ++G C + V++A + M G+ PN ++ L Y + L G
Sbjct: 147 RPNVVMYNTIIDGLCKD-KLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAG------ 199
Query: 277 ELESLMNEFGFSSQMVF---------YSSLISGYVKLGNLESASRTILLCLGGG---NME 324
LM FG ++M+ Y+ L+ K G ++ A + + G N+
Sbjct: 200 ---QLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVV 256
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS----GIVVDRSVGFGIISACVN 380
+ + YC + G +QN K + + +++ + + P+ I++DR + +N
Sbjct: 257 SYNTLMDGYCLI--GEVQNA--KQMFHTMVQ-KGVNPNVYSYNIMIDRLCKSKRVDEAMN 311
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
L L + H N +V Y + +CK R A L+ ++ G DV
Sbjct: 312 L-LREVLHK-----NMVPNTV---TYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVT 362
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE-LMAAFLDEV 499
Y +L++A +Q+ A +LF M+E I K +Y ++ GL + R + F +
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLL 422
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
V+ R+ V T +N +I CK G L++A
Sbjct: 423 VKGCRINVWT--YNVMISGLCKEGMLDEA 449
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 157/377 (41%), Gaps = 36/377 (9%)
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS--RTIL--LCLGGGNM 323
+KG++ + L L+N F QM F +++ +KLG + T++ LCL G
Sbjct: 38 VKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVK 97
Query: 324 EQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSV 370
+ F + +Y ++ G + G + L+ IE + P+ ++ +
Sbjct: 98 KSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNT-- 155
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
II L ++A+ + EM+A G + Y + +C + EA L+ ++
Sbjct: 156 ---IIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI 212
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG---LMENH 487
+ +V Y L++A + A +L M + + SY T+M G + E
Sbjct: 213 LKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQ 272
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+ M + + +P V + +N +I CK+ R+++A LR ++ PN TY
Sbjct: 273 NAKQMFHTMVQKGVNPNV----YSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTY 328
Query: 548 LSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQ 607
SLI+G+ + S L + E+ + GQ + + L AL K D
Sbjct: 329 SSLIDGFCKLGRITSALDLLKEMYHR----GQPADVVTYT---SLLDALCKNQNLDKATA 381
Query: 608 VVEKSQEMKVFVDKWKY 624
+ K +E + +K+ Y
Sbjct: 382 LFMKMKERGIQPNKYTY 398
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 165/424 (38%), Gaps = 80/424 (18%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ- 272
D + +YA N+ + G C +S AE + M+ GV P ++F L Y K LQ
Sbjct: 429 DGIGETVYAYNSLINGQC-KFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYC-KDLQV 486
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
+K +L + M + G + + +++LISG + AS L +E+ E
Sbjct: 487 QKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASE-----LFDELVERKIKPTEV 541
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
TY +++G+ ++G + L+ + + G+V D +IS + G KA +
Sbjct: 542 TYNVLIEGYCRDGKIDKAFELL---EDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFI 598
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
D+++ + Y L YC+E R EA ++ G+ +D+ + LI+ ++
Sbjct: 599 DDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQ 658
Query: 452 QDFQSAFSLFRDMREARI-------------YDLKGS----------------------Y 476
D ++ F L +DM + + Y +GS Y
Sbjct: 659 PDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTY 718
Query: 477 LTIMTGLM---ENHRPELM----------------AAFLDEVVEDPRVE----------- 506
+M GL E R L+ FLD + ++ ++
Sbjct: 719 TALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK 778
Query: 507 ---VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
T N II FCK GR +A + L M P+ TY +LI Y + +
Sbjct: 779 GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGAS 838
Query: 564 LMMW 567
+ +W
Sbjct: 839 VKLW 842
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 145/355 (40%), Gaps = 47/355 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN++ NA + C G + AE + MS++ +RPN ++ L + G + +
Sbjct: 363 PNLFVYNALINSLCKG-GDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAIS 421
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M + G + Y+SLI+G K G+L SA+ ++ + + +E + T+ ++
Sbjct: 422 YFDRMIQDGIGETVYAYNSLINGQCKFGDL-SAAESLFIEMTNKGVEPT---ATTFTSLI 477
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G+ ++ V+ KA + ++M
Sbjct: 478 SGYCKDLQVQ--------------------------------------KAFKLYNKMIDN 499
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + + + + C ++ AEA++L ++ ++ Y+ LIE A
Sbjct: 500 GITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKA 559
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
F L DM + + +Y +++GL R F+D+ + V++ +++++H
Sbjct: 560 FELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDD-LHKQNVKLNEMCYSALLH 618
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA---EQYFSVLMMWHE 569
+C+ GRL +A MI + + LI+G + + +F +L H+
Sbjct: 619 GYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHD 673
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 151/373 (40%), Gaps = 17/373 (4%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
LQ ++++ M LG P E++ L +G + EL + FGF +
Sbjct: 308 LQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFV 367
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLAN 351
Y++LI+ K G+L+ A L NM + TY ++ F ++G L
Sbjct: 368 YNALINSLCKGGDLDKAE------LLYSNMSLMNLRPNGITYSILIDSFCRSGR---LDV 418
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
I ++ GI +I+ G A S+ EM G + +
Sbjct: 419 AISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLIS 478
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
YCK+ + +A +L + +G+ +V + ALI ++ A LF ++ E +I
Sbjct: 479 GYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKP 538
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
+ +Y ++ G + + + L+++ + V T+ + +I C GR+ AK
Sbjct: 539 TEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVP-DTYTYRPLISGLCSTGRVSKAKDF 597
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTDGQKGIKFEHNLVD 590
+ + + N+ Y +L++GY + L E I+R I+ D + L+D
Sbjct: 598 IDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMD----LVCHAVLID 653
Query: 591 AFLYALVKGGFFD 603
L + FFD
Sbjct: 654 GALKQPDRKTFFD 666
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M A G + + Y + CK R +EA ++ + GL DV Y L+ Q
Sbjct: 251 MEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQ 310
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTH 510
F++ L +M E + + ++ GL + + + + +V P + V
Sbjct: 311 FEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFV--- 367
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N++I++ CK G L+ A+ M + PN TY LI+ +
Sbjct: 368 -YNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSF 410
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 15/235 (6%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+++ M G+RP+ + + Y+ +G +K E LM +V Y++L++G
Sbjct: 667 LLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLC 726
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK---GLANLIIEAQKL 359
K G ++ A + + N+ + TY + + GN+K GL + +++
Sbjct: 727 KAGEMDRAG-LLFKRMQAANVPPNSI---TYGCFLDNLTKEGNMKEAIGLHHAMLK---- 778
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
G++ + II LG +A +L EM G Y + YC+
Sbjct: 779 ---GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNV 835
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-REARIYDLK 473
+ +L + + GL+ D+ Y+ LI + + AF L DM R I D K
Sbjct: 836 GASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNK 890
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 135/369 (36%), Gaps = 37/369 (10%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+Y A + G C +++A ++ + + ++P E ++ L Y G +K
Sbjct: 501 ITPNVYTFTALISGLC-STNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKA 559
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI-----------------LL-- 316
EL M++ G Y LISG G + A I LL
Sbjct: 560 FELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHG 619
Query: 317 -CLGGGNME---------QSDFSKETYCEVV--KGFLQNGNVKGLANLIIEAQKLEPSGI 364
C G ME Q + + C V G L+ + K +L+ + + G+
Sbjct: 620 YCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLL---KDMHDQGL 676
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
D + +I G KA D M C + Y + CK A
Sbjct: 677 RPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGL 736
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L + ++ + + Y ++ + + A L M + + + ++ I+ G
Sbjct: 737 LFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTV-THNIIIRGFC 795
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
+ R L E+ E+ + ++++I+ +C++G + + + M+ EP+
Sbjct: 796 KLGRFHEATKVLSEMTENG-IFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDL 854
Query: 545 QTYLSLING 553
Y LI G
Sbjct: 855 VAYNLLIYG 863
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 122/531 (22%), Positives = 213/531 (40%), Gaps = 57/531 (10%)
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECC 205
HT S+ N N A +F M + R P +G L + K ++ + +F+
Sbjct: 21 HTHFHSLPNLNDAIDSFNR---MLRMRPPPPIIKFGKILGSLV-KTKHYPIVIHLFQR-- 74
Query: 206 RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
L ++ N N + C+ L+ ++ A V + LG +P+ ++ L
Sbjct: 75 -----MELHGIQSNYITLNILINSYCH-LRQINSAFSVFAKILKLGYQPDIITYTTLIRG 128
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
L G ++ + + G V Y +LI+G K+G A R LL G + +
Sbjct: 129 LCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALR--LLRKIEGEICR 186
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLS 384
D Y ++ G ++ V+ +L E +K +V S+ +G C+ +G
Sbjct: 187 PDVV--MYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGF---CI-VGQL 240
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
DKA +L+EM + + + + CKE + EA LV + G+ DV Y+AL
Sbjct: 241 DKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNAL 300
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME-NHRPELMAAFLDEVVEDP 503
++ ++ A ++F M + + SY +++GL + E M F E + +
Sbjct: 301 MDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLF--EGMRNE 358
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
V ++S+I CK+GR+ A + + M PN TY SLI+ + Q
Sbjct: 359 NVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKA 418
Query: 564 LMMWHEIKRK----------ISTDG--------------QKGIKFEHNLVDAFLYALVKG 599
+ + +IK + I DG Q + HN VD Y+++
Sbjct: 419 IALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHN-VDVVTYSIMIN 477
Query: 600 G-----FFDAVMQVVEKSQEMKVFVDKWKYK---QAFMENHKKLKVAKLRK 642
G FD + ++ K ++ D Y+ AF E K KL +
Sbjct: 478 GLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLR 528
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 113/287 (39%), Gaps = 10/287 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ N ++G C + +A+ ++ M GV P+ ++ L Y L K
Sbjct: 255 VNPNVCTFNTLVDGLCKE-GKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKA 313
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ ++M + G + + YS +ISG K+ L+ A G E Y
Sbjct: 314 KNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDL----FEGMRNENVIPDVVAYSS 369
Query: 336 VVKGFLQNGNVKGLANLIIEAQ-KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G ++G + + E + +P ++ S +I A DKA ++L ++
Sbjct: 370 LIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTS----LIDALCKSHQVDKAIALLKKI 425
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + Y + CK+ R +A ++ D+ G +DV Y +I F
Sbjct: 426 KDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLF 485
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
A +L M + +Y TI+ E + L E+++
Sbjct: 486 DEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 191/475 (40%), Gaps = 65/475 (13%)
Query: 110 IAHLSSLQDNHNLKRAFASVVYVIEKNPKL---LDFQTVHTLLGSMRNANTAAPAFALVK 166
I LSSL + + + + V ++++ ++ D T TL+ + N A+ A ALV
Sbjct: 80 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 139
Query: 167 CMFKNRYFMPFELWGGFLVD-ICRKNSNFVAF-LKVFEECCRIALDENLDFMKPNIYACN 224
M + R P + G +V+ +C++ +AF L E +I D + N
Sbjct: 140 RMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD---------VVIFN 189
Query: 225 AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE 284
++ C + V DA + + M G+RPN ++ L G +L S M E
Sbjct: 190 TIIDSLC-KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 285 FGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS-DFSKETYCEVVKGFLQN 343
+ +V +++LI +VK G A + L +++S D TY ++ GF +
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEK-----LHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
+ DKA + + M + C L
Sbjct: 304 DRL--------------------------------------DKAKQMFEFMVSKDCFPDL 325
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y +K +CK R + T+L ++S GL D Y LI+ D +A +F+
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M + +Y ++ GL N + E D ++ +++ + + ++I CKAG
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
+++D + +PN TY ++I+G + +L + + +K+ DG
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR----LLQEAYALLKKMKEDG 495
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 140/338 (41%), Gaps = 46/338 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+I ++ L G C+G + +SDA +++ M +G RP+ +F L + L + V
Sbjct: 77 EPSIVTLSSLLNGYCHG-KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L M + G +V Y +++G K G+++ A
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA-------------------------- 169
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
NL+ K+E + I D + II + D A ++ EM
Sbjct: 170 -------------FNLL---NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + Y + C R ++A+QL+ D+ + ++ ++ALI+A + F
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV-EDPRVEVKTHDWNSI 515
A L DM + I +Y +++ G + R + + +V +D ++ T +N++
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT--YNTL 331
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
I FCK+ R+ED R M + TY +LI G
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 135/310 (43%), Gaps = 12/310 (3%)
Query: 253 RPNESSFGFLAYLYALKGLQ--EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
RP S F F L A+ ++ + ++ L M G S + Y+ LI+ + + + A
Sbjct: 5 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 64
Query: 311 SRTILLCLGGGNMEQS-DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRS 369
L L G M+ + S T ++ G+ K +++ + ++ G D
Sbjct: 65 -----LALLGKMMKLGYEPSIVTLSSLLNGYCHG---KRISDAVALVDQMVEMGYRPDTI 116
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
+I + +A +++D M GC L Y + CK A L+ +
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
++ ++ DV ++ +I++ + A +LF++M I +Y ++++ L R
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+ L +++E ++ +N++I AF K G+ +A++ MI +P+ TY S
Sbjct: 237 SDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 550 LINGYVTAEQ 559
LING+ ++
Sbjct: 296 LINGFCMHDR 305
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 124/316 (39%), Gaps = 22/316 (6%)
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
L+D K FV K+ ++ + ++D P+I+ N+ + G C + A+++
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSID-------PDIFTYNSLINGFCMH-DRLDKAKQM 312
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
E M P+ ++ L + E EL M+ G V Y++LI G
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
G+ ++A + + G D TY ++ G NG ++ + QK E
Sbjct: 373 DGDCDNAQKVFKQMVSDG--VPPDIM--TYSILLDGLCNNGKLEKALEVFDYMQKSE--- 425
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
I +D + +I G D + ++ G + Y + C + EA
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
L+ + G D G Y+ LI A + D ++ L R+MR R G TI GL
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV---GDASTI--GL 540
Query: 484 MEN--HRPELMAAFLD 497
+ N H L +FLD
Sbjct: 541 VANMLHDGRLDKSFLD 556
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 156/363 (42%), Gaps = 19/363 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN+ N + C+ L +S + V+ + LG +PN + L LKG +K
Sbjct: 83 IEPNLVTLNILINCFCH-LGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKS 141
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD--FSKETY 333
V + GF V Y +L++G K+G A + + + +E S + Y
Sbjct: 142 VHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRM------IEDSSTGLNVVMY 195
Query: 334 CEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ G ++ V + E A+ + P+ I +G G A G A S+L
Sbjct: 196 NTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIG-GFCLA----GQLTGAFSLL 250
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+EM + + Y + A CKE + EA L+ ++ G DV Y +L++ +
Sbjct: 251 NEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKN 310
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTH 510
Q+ A +LF M+E I K +Y ++ GL + R + F D +V+ ++V T
Sbjct: 311 QNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCT- 369
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+N +I CK G L++A +M PN T+ +I ++ + HE+
Sbjct: 370 -YNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEM 428
Query: 571 KRK 573
K
Sbjct: 429 IAK 431
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 110/256 (42%), Gaps = 27/256 (10%)
Query: 193 NFVAFLKVFEECCRIAL-DENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKV 243
N V + + + C+ L +E DF PN+ + G C Q ++ A +
Sbjct: 191 NVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQ-LTGAFSL 249
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ---MVFYSSLISG 300
+ M + + PN ++ L +G K+ E ++L+ E + Q +V Y+SL+ G
Sbjct: 250 LNEMILKNINPNVYTYAILIDALCKEG---KVKEAKNLLAEMHYRGQPADVVTYTSLLDG 306
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
+ K NL+ A+ + M++ +K TY ++ G + G +K L Q
Sbjct: 307 FCKNQNLDKATALFM------KMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLF---QD 357
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
L G +D +I G+ D+A +I +M GC + + +++ K+
Sbjct: 358 LLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDE 417
Query: 419 TAEATQLVMDISSSGL 434
+A +L+ ++ + GL
Sbjct: 418 NDKAEKLLHEMIAKGL 433
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 159/375 (42%), Gaps = 17/375 (4%)
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
EE ++ DE+ + N++ CN L C + A +++ M G+ PN S+
Sbjct: 425 EEALKL-FDESFETGLANVFICNTILSWLCKQ-GKIDKATELLRKMESRGIGPNVVSYNN 482
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+ + K + + S M E G YS LI G K + E ++ +
Sbjct: 483 VMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFK-NHDEQNVLEVVNQMTSS 541
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
N+E + Y ++ G + G L+ A +E V II +
Sbjct: 542 NIEVNGV---VYQTIINGLCKVGQTSKARELL--ANMIEEKRFCVSCMSYNSIIDGFIKE 596
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G D A + +EM A G S + Y + CK +R +A ++ ++ + G++LD+ Y
Sbjct: 597 GEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 656
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD---E 498
ALI + +SA +LF ++ E + + Y ++++G M A LD +
Sbjct: 657 GALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGN---MVAALDLYKK 713
Query: 499 VVEDP-RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+++D R ++ T + ++I K G L A M + P++ Y ++NG
Sbjct: 714 MLKDGLRCDLGT--YTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKK 771
Query: 558 EQYFSVLMMWHEIKR 572
Q+ V+ M+ E+K+
Sbjct: 772 GQFVKVVKMFEEMKK 786
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 142/385 (36%), Gaps = 51/385 (13%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + N+ A + + G C + A + M G PN +F L ++ G E
Sbjct: 332 DGISMNVVAATSLITGHCKN-NDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEME 390
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
K +E M G + + ++I G++K E A + D S ET
Sbjct: 391 KALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLF------------DESFET- 437
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
GLAN+ I I+S G DKA +L +
Sbjct: 438 --------------GLANVFICNT----------------ILSWLCKQGKIDKATELLRK 467
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + G + Y + A+C++ A + ++ GL+ + Y LI+ + D
Sbjct: 468 MESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHD 527
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
Q+ + M + I Y TI+ GL + + L ++E+ R V +N
Sbjct: 528 EQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYN 587
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
SII F K G ++ A M PN TY SL++G + L M E+K
Sbjct: 588 SIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMK-- 645
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVK 598
KG+K + A ++ K
Sbjct: 646 -----NKGVKLDIPAYGALIHGFCK 665
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 116/269 (43%), Gaps = 10/269 (3%)
Query: 183 FLVDICRKNSNFVAFLKVFEECCRIALDENL--DFMKPNIYACNAALEGCCYGLQSVSDA 240
F V NS F+K E +A E + + + PN+ + ++G C + A
Sbjct: 579 FCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKN-NRMDQA 637
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
++ + M GV+ + ++G L + + K E L S + E G + Y+SLISG
Sbjct: 638 LEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISG 697
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
+ LGN+ +A L G + D TY ++ G L+ GN+ ++L E Q +
Sbjct: 698 FRNLGNMVAALDLYKKMLKDG--LRCDLG--TYTTLIDGLLKEGNLILASDLYTEMQAV- 752
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
G+V D + I++ G K + +EM + + +Y + + +E
Sbjct: 753 --GLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLD 810
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASI 449
EA +L ++ G+ D +D L+ +
Sbjct: 811 EAFRLHDEMLDKGILPDGATFDILVSGKV 839
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 79/409 (19%), Positives = 143/409 (34%), Gaps = 91/409 (22%)
Query: 193 NFVAFLKVFEECCRIALDENLDF------------MKPNIYACNAALEGCCYGLQSVSDA 240
N V++ V CR +N+D +KPN Y + ++GC + +
Sbjct: 476 NVVSYNNVMLAHCR---KKNMDLARTVFSNMLEKGLKPNNYTYSILIDGC-FKNHDEQNV 531
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL-ESLMNEFGFSSQMVFYSSLIS 299
+V+ M+ + N + + G K EL +++ E F + Y+S+I
Sbjct: 532 LEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIID 591
Query: 300 GYVKLGNLESASRTIL-LCLGG------------------GNMEQS------------DF 328
G++K G ++ A +C G M+Q+
Sbjct: 592 GFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKL 651
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
Y ++ GF + N++ + L E + L PS V + +IS NLG
Sbjct: 652 DIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYN-----SLISGFRNLGNMVA 706
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + +M G LG Y + KE A+ L ++ + GL D Y ++
Sbjct: 707 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVN 766
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
F +F +M++ + P V
Sbjct: 767 GLSKKGQFVKVVKMFEEMKKNNV--------------------------------TPNVL 794
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+ +N++I + G L++A R M+ P+ T+ L++G V
Sbjct: 795 I----YNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKV 839
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 25/194 (12%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIE 134
+H +N + A F L L PS+PV NSLI+ R ++V ++
Sbjct: 660 IHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGF----------RNLGNMVAALD 709
Query: 135 KNPKLL------DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDIC 188
K+L D T TL+ + A L M + +P E+ +V+
Sbjct: 710 LYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEM-QAVGLVPDEIMYTVIVNGL 768
Query: 189 RKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMS 248
K FV +K+FEE + + + PN+ NA + G Y ++ +A ++ + M
Sbjct: 769 SKKGQFVKVVKMFEEMKK-------NNVTPNVLIYNAVIAG-HYREGNLDEAFRLHDEML 820
Query: 249 VLGVRPNESSFGFL 262
G+ P+ ++F L
Sbjct: 821 DKGILPDGATFDIL 834
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 8/220 (3%)
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A ++ EM G + Y +K CK R+AEA + ++ G D+ Y A I+
Sbjct: 506 ALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAID 565
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ + A +FRD+ +Y T++ G + R LDE+V V
Sbjct: 566 GFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVP 625
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+N +I +CK G ++ A L RM+ + EPN TY +LI+G A + + +
Sbjct: 626 -SVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHL 684
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVM 606
W+E++ K + + I F A ++ L K G+ DA +
Sbjct: 685 WNEMRGKGCSPNR--ISFI-----ALIHGLCKCGWPDAAL 717
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 10/186 (5%)
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
I V + D+A I ++ A G + Y + +CK R +EA ++ ++ + GL
Sbjct: 564 IDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGL 623
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDM----REARIYDLKGSYLTIMTGLMENHRPE 490
V Y+ LI+ + D AF M RE + +Y T++ GL RP+
Sbjct: 624 VPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVI----TYTTLIDGLCNAGRPD 679
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+E + + ++IH CK G + A R M + P+ Y++L
Sbjct: 680 DAIHLWNE-MRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGERE-TPDTIVYVAL 737
Query: 551 INGYVT 556
I +++
Sbjct: 738 ITSFIS 743
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 5/155 (3%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G DKA +++ M G + + + + ++ R +A QL + SG DV Y
Sbjct: 242 GEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVY 301
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL-MAAFLDEVV 500
DALI ++ + A L +M+E I + I++ L+ E+ + ++E +
Sbjct: 302 DALIGGLCAKKEIEKALHLLSEMKELGI----DPDIQILSKLIPYCSEEVDIYRLIEERL 357
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
ED E +NS+++ ++ A L M
Sbjct: 358 EDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAM 392
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
++ SG + D ++++A S+ F A S+F ++ D G L+I+ L +
Sbjct: 184 EMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVD--GHVLSILV-LTFSK 240
Query: 488 RPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
E+ AF L E +ED + + + +IH F + R++ A + ++M F P+
Sbjct: 241 CGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSV 300
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIK 571
Y +LI G ++ L + E+K
Sbjct: 301 YDALIGGLCAKKEIEKALHLLSEMK 325
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 106/264 (40%), Gaps = 37/264 (14%)
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
+++T+C ++ GF++ V L +K++ SG D SV +I +KA
Sbjct: 261 LNEKTFCVLIHGFVRQSRVDKALQLF---KKMQKSGFAPDVSVYDALIGGLCAKKEIEKA 317
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKE----HRTAEATQLVMDISSSGLQLDVGNYDA 443
+L EM G + + + L YC E +R E + + D+ + + L Y++
Sbjct: 318 LHLLSEMKELGIDPDIQI-LSKLIPYCSEEVDIYRLIE--ERLEDLDTEAMLL---LYNS 371
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
++ + + A+ L L MTG E+ F+ + + P
Sbjct: 372 VLNGLVNGKSVDKAYYL----------------LXAMTGDNYTDNFEVNKFFMVKEMVRP 415
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
T ++ +I C G+L+ A R M+ + + N Y +LI+ + +
Sbjct: 416 ----XTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEEC 471
Query: 564 LMMWHEIKRKISTDGQKGIKFEHN 587
++ E+K G + +F HN
Sbjct: 472 YLLLKEMK----GSGFRPTQFTHN 491
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 147/343 (42%), Gaps = 21/343 (6%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ A L+G C V +A K+++ MS+ G PN+ + L G ++
Sbjct: 595 RPNVVTYGALLDGFCKS-HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 653
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
E+++ M+E GF + + YSSLI Y K+ + AS+ + M ++ + Y
Sbjct: 654 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL------SKMLENSCAPNVVIYT 707
Query: 335 EVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSIL 391
E++ G + G L ++E + +P+ + + GFG+I G + +L
Sbjct: 708 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI------GKIETCLELL 761
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+ M + G + Y + CK A L+ ++ + Y +IE +
Sbjct: 762 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG--FN 819
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK-TH 510
++F + L ++ + Y ++ L++ R E+ L+EV V +
Sbjct: 820 KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 879
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+NS+I + C A ++E A + M P Q++ SLI G
Sbjct: 880 TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 922
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 172/447 (38%), Gaps = 79/447 (17%)
Query: 195 VAFLKVFEECCRIAL-DENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIE 245
V + K+ C +L +E +DF+ PN+ + L GC + + ++V+
Sbjct: 262 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC-LNKKQLGRCKRVLN 320
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY----------- 294
M + G P+ F L + Y G +L M + G V Y
Sbjct: 321 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 380
Query: 295 ---------------SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-------- 331
S +++ V L + +S T LC G + +E
Sbjct: 381 DSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 440
Query: 332 ---TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY +V+ +L N + LA L+ E K G+V D ++ + GL ++A
Sbjct: 441 DTSTYSKVL-NYLCNASKMELAFLLFEEMK--RGGLVADVYTYTIMVDSFCKAGLIEQAR 497
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+EM GC+ + Y + AY K + + A +L + S G ++ Y ALI+
Sbjct: 498 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 557
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF--LDEVVEDPRVE 506
+ + A +F M ++ P++ F D+ E P V
Sbjct: 558 CKAGQVEKACQIFERMCGSK------------------DVPDVDMYFKQYDDNSERPNVV 599
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+ +++ FCK+ R+E+A++ L M EPN Y +LI+G + L
Sbjct: 600 T----YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK----LDE 651
Query: 567 WHEIKRKISTDGQKGIKFEH-NLVDAF 592
E+K ++S G + + +L+D +
Sbjct: 652 AQEVKTEMSEHGFPATLYTYSSLIDRY 678
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 161/394 (40%), Gaps = 34/394 (8%)
Query: 178 ELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDF-MKPNIYACNAALEGCCYGLQS 236
E++G FL + RK+ +F EE R+ DF +P+ N ++
Sbjct: 156 EVFGQFLNVLVRKHCRNGSFSIALEELGRLK-----DFRFRPSRSTYNCLIQAFLKA-DR 209
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ A + MS+ +R + + AY G K E +L+ F VFY+
Sbjct: 210 LDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG---KWREALTLVETENFVPDTVFYTK 266
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFL---QNGNVKGLAN 351
LISG + E A + M + TY ++ G L Q G K + N
Sbjct: 267 LISGLCEASLFEEAMDFL------NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 320
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
+++ + PS + + ++ A G A+ +L +M CG G VY +
Sbjct: 321 MMM-MEGCYPSPKIFN-----SLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG 374
Query: 412 AYCKEHRTAE------ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
+ C + + A + ++ ++G+ L+ N + ++ ++ AFS+ R+M
Sbjct: 375 SICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 434
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+Y ++ L + EL +E+ V + + ++ +FCKAG +
Sbjct: 435 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV-ADVYTYTIMVDSFCKAGLI 493
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
E A++ M + PN TY +LI+ Y+ A++
Sbjct: 494 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 527
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 122/317 (38%), Gaps = 43/317 (13%)
Query: 276 VELESL--MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ LE L + +F F Y+ LI ++K L+SAS I + N+ F+ +
Sbjct: 177 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSAS-LIHREMSLANLRMDGFTLRCF 235
Query: 334 ----CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
C+V K A ++E + P + + +IS L ++A
Sbjct: 236 AYSLCKVGKW--------REALTLVETENFVPDTVFYTK-----LISGLCEASLFEEAMD 282
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
L+ M A C + Y L + + +++ + G +++L+ A
Sbjct: 283 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 342
Query: 450 TSQDFQSAFSLFRDMREAR------IYDL--------KGSYLTIMTGLMENHRPELMAAF 495
TS D A+ L + M + +Y++ K S + L E E++AA
Sbjct: 343 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAA- 401
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
V + + +S C AG+ E A +R MI F P+ TY ++N
Sbjct: 402 --------GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 453
Query: 556 TAEQYFSVLMMWHEIKR 572
A + +++ E+KR
Sbjct: 454 NASKMELAFLLFEEMKR 470
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 116/591 (19%), Positives = 215/591 (36%), Gaps = 113/591 (19%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNL------KRAFAS 128
+H + + A+K K + P V N LI + +D+ N ++A++
Sbjct: 338 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSE 397
Query: 129 VVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDIC 188
++ +L+ V + + +A AF++++ M + + L +C
Sbjct: 398 ML----AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 453
Query: 189 RKNSNFVAFLKVFEEC-------------------CRIALDEN----LDFMK-----PNI 220
+ +AFL +FEE C+ L E + M+ PN+
Sbjct: 454 NASKMELAFL-LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 512
Query: 221 YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK------ 274
A + + VS A ++ ETM G PN ++ L + G EK
Sbjct: 513 VTYTALIHAYLKA-KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 571
Query: 275 -------IVELESLMNEFGFSSQ---MVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
+ +++ ++ +S+ +V Y +L+ G+ K +E A + L +ME
Sbjct: 572 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL----LDAMSME 627
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS----GIVVDRSVGFGIISACVN 380
+ ++ Y ++ G + G + EAQ+++ G +I
Sbjct: 628 GCEPNQIVYDALIDGLCKVGKLD-------EAQEVKTEMSEHGFPATLYTYSSLIDRYFK 680
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
+ D A +L +M C+ + +Y + CK +T EA +L+ + G Q +V
Sbjct: 681 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 740
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARI------------YDLKGSYLTIMTGLME--- 485
Y A+I+ ++ L M + + K L + L+E
Sbjct: 741 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 800
Query: 486 -NHRPELMAAF-----------------LDEVVED---PRVEVKTHDWNSIIHAFCKAGR 524
H P A + LDE+ +D P + V + +I KA R
Sbjct: 801 QTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSV----YRLLIDNLIKAQR 856
Query: 525 LEDAKRTLRRMIFLQFEPND--QTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
LE A R L + D TY SLI A + + ++ E+ +K
Sbjct: 857 LEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK 907
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 107/506 (21%), Positives = 199/506 (39%), Gaps = 69/506 (13%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIE 134
+H D+A++ + + P V N +I L + F +V +
Sbjct: 37 IHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGT-K 95
Query: 135 KNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNF 194
P ++ F + L+ ++ + AF + + M + +P N
Sbjct: 96 CTPDIITF---NILVDALVKSGRVEEAFQIFESMHTSSQCLP----------------NV 136
Query: 195 VAFLKVFEECCRIA-LD---ENLDFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIE 245
V + V C+ LD E LD M PN+ + +EG C ++ +++
Sbjct: 137 VTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRT-DKGFTLLQ 195
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQ-----EKIVELESLMNEFGFSSQMVFYSSLISG 300
M+ G +P+ + Y L GL ++ +EL LM G +V Y+SL+
Sbjct: 196 EMTRRGFQPD-----VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMEL 250
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEAQK 358
+ + ++ A R I + M + + Y V+ G ++ + +AQ
Sbjct: 251 FCRSKQVDRAFRLIQV------MSERGCPPDVINYNTVIAGLCRDARLD-------DAQA 297
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLS-----------DKAHSILDEMNACGCSVGLGVYV 407
L +V R V I + + GL + A IL+ M GC G Y
Sbjct: 298 LLKQ-MVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYA 356
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
++ C+ ++ +A L+ + S + D+ ++ +I + S D +A+ +F M E
Sbjct: 357 VVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSER 416
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+Y ++ GL + + + +VE R V T +NS++ C GR+E+
Sbjct: 417 ECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVAT--YNSVLDGLCGVGRIEE 474
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLING 553
A R + MI + P+ +Y +LI G
Sbjct: 475 AVRMVEGMIHKECFPDGASYGALIRG 500
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 134/304 (44%), Gaps = 15/304 (4%)
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS-- 311
PNE ++G L + G ++ EL M + G + ++ +I G K G A
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87
Query: 312 -RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
+T+ G D T+ +V +++G V+ + + + S + V
Sbjct: 88 FKTV-----AGTKCTPDII--TFNILVDALVKSGRVEEAFQIF---ESMHTSSQCLPNVV 137
Query: 371 GFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
+ +I+ G D+A +LD MN GC + Y ++ CK RT + L+ ++
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+ G Q DV Y+ L+ S+ A L + M + Y +Y ++M + +
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+ A L +V+ + ++N++I C+ RL+DA+ L++M+ + P+ TY +
Sbjct: 258 D-RAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYST 316
Query: 550 LING 553
+I+G
Sbjct: 317 IIDG 320
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 35/221 (15%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I G D+A+ +LDEM G G+ V+ +K CK R +A ++ +
Sbjct: 36 LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTK 95
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMR-EARIYDLKGSYLTIMTGLMENHRPELM 492
D+ ++ L++A + S + AF +F M ++ +Y T++ GL ++ + +
Sbjct: 96 CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRA 155
Query: 493 AAFLDEVVED---PRV-------------------------------EVKTHDWNSIIHA 518
LD + E P V + +N++++
Sbjct: 156 IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
CK+ RL++A ++ MI P TY SL+ + ++Q
Sbjct: 216 LCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQ 256
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 155/386 (40%), Gaps = 33/386 (8%)
Query: 57 QQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL 116
Q+ + Q ++ T L+ + DEA + + + + +P+ NSL+
Sbjct: 195 QEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCR- 253
Query: 117 QDNHNLKRAFASVVYVIEKN--PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYF 174
+ + RAF + + E+ P ++++ TV + G R+A A AL+K M R
Sbjct: 254 --SKQVDRAFRLIQVMSERGCPPDVINYNTV--IAGLCRDARLD-DAQALLKQMVAARCV 308
Query: 175 MPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMK-----PNIYACNAALEG 229
+ + +C K+ A K+ C E L+ MK PN +EG
Sbjct: 309 PDVITYSTIIDGLC-KDWRVDADWKLEAAC------EILEMMKQTGCPPNAGTYAVVIEG 361
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
C +S A ++ M V P+ SSF + + ++ +M+E
Sbjct: 362 LCRARKS-QQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKP 420
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
V Y++LI G K G ++ A R L +E TY V+ G G ++
Sbjct: 421 NPVAYAALIDGLSKGGEVDKAVRVFEL-----MVESFRPGVATYNSVLDGLCGVGRIEEA 475
Query: 350 ANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
++ + ++ P G S G +I + ++A+ + + A G ++ +GVY
Sbjct: 476 VRMVEGMIHKECFPDGA----SYG-ALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYN 530
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSG 433
+ CK+ R ++A + + +G
Sbjct: 531 VLVNELCKKKRLSDAHGVANKLIEAG 556
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 195/495 (39%), Gaps = 49/495 (9%)
Query: 79 LLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASV--------- 129
LL EA L P P +L++ L S++D + A++
Sbjct: 41 LLRRGRAEASARLNRLLRLVPLPESP---ALLSSLPSVRDAVSYNTVLAALCRQGGCLDA 97
Query: 130 ------VYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGF 183
V E P + + T+ L + R A L++ M + +G
Sbjct: 98 ALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQA---VGLLRDMQASGVRPDVVTYGTL 154
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYG--LQSVSDAE 241
+ +C ++ +++ E C ++ PN+ + L+G C + VS
Sbjct: 155 IRGLC-DAADVDKAVELLREMCESGIE-------PNVVVYSCLLQGYCKAGRWECVS--- 203
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
KV E MS G+ P+ + L +G +K ++ M E G +V Y+ LI+
Sbjct: 204 KVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSM 263
Query: 302 VKLGNLESASRTILLCLGGGNMEQS-DFSKETYCEVVKGF---LQNGNVKGLANLIIEAQ 357
K G+++ A + L +E+ TY ++ G L+ GL +I +
Sbjct: 264 CKEGSVKEA-----MSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGE 318
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ +V SV G+ G +A + D M GC+ L + + + H
Sbjct: 319 TMVEPNVVTFNSVIHGLCKT----GRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVH 374
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+ +A +L+ +++SSGL+ D Y LI A SL MR I Y+
Sbjct: 375 KVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYI 434
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++ L E E F DE+ ++ +++V ++++IH C+ + A+ L+ M+
Sbjct: 435 PLLAALCEQGMMEQARNFFDEMHKNCKLDVVA--YSTMIHGACRLRDRKSAEEFLKHMLD 492
Query: 538 LQFEPNDQTYLSLIN 552
P+ TY LIN
Sbjct: 493 EGLIPDSVTYSMLIN 507
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 18/272 (6%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
TY +++G +V L+ +++ SGI + V ++ G + +
Sbjct: 150 TYGTLIRGLCDAADVDKAVELL---REMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVF 206
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+EM+ G + +Y + + C+E + +ATQ++ + GL+ +V Y+ LI +
Sbjct: 207 EEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKE 266
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-DPRVEVKTH 510
+ A SL +M E + +Y T++TGL + L+E++ + VE
Sbjct: 267 GSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVV 326
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+NS+IH CK GR+ A + M N T+ LI G L+ H++
Sbjct: 327 TFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGG----------LLRVHKV 376
Query: 571 KRKIS-TDGQKGIKFEHNLVDAFLYALVKGGF 601
K+ + D E D+F Y+++ GF
Sbjct: 377 KKAMELMDEMASSGLEP---DSFTYSILINGF 405
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 143/353 (40%), Gaps = 30/353 (8%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
EN M P + NA + G Q + K +E M +G++P+ ++ L Y G
Sbjct: 335 ENEGIM-PTVVTYNAMIHGLLQSGQVEAAQVKFVE-MRAMGLQPDVITYNSLLNGYCKAG 392
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
++ + L + G + ++ Y+ LI GY +LG+LE A R L +EQ
Sbjct: 393 SLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARR-----LKEEMVEQGCLPD 447
Query: 331 E-TYCEVVKGFLQNGNVKGLANLIIE---AQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
TY ++KG N +A + ++ L+P + I A + LG K
Sbjct: 448 VCTYTILMKGS-HNACSLAMAREFFDEMLSKGLQPDCFAYNTR-----IRAELTLGAIAK 501
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + + M G S Y + CK +A L M + +GLQ D Y LI
Sbjct: 502 AFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIH 561
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF------LDEVV 500
A + A F+DM + +Y + R L +A+ L+E V
Sbjct: 562 AHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCR--RGNLYSAYGWFRKMLEEGV 619
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
E + +N +IHA C+ GR + A R M+ PN TY LI+G
Sbjct: 620 EPNEIT-----YNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDG 667
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 146/381 (38%), Gaps = 57/381 (14%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEK------VIETMSVLGVRPNESSFGFLAYLYALK 269
+ P++ CN L + +SDA + V M LG+ P+ ++ L + +
Sbjct: 198 VAPDVKDCNRVL-------RVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKE 250
Query: 270 GLQEKIVELESLMNEFGFS--SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
G +K+ L M G V ++ +I+G + G+LE A+ + G
Sbjct: 251 GRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMV-----EGMRLSKK 305
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
S TY ++ G L G VK +L +E +E GI+ +I + G + A
Sbjct: 306 ASSFTYNPLITGLLAKGFVKKADDLQLE---MENEGIMPTVVTYNAMIHGLLQSGQVEAA 362
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
EM A G + Y L YCK EA L D+ +GL V Y+ LI+
Sbjct: 363 QVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDG 422
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG-----------------LMENHRPE 490
D + A L +M E +Y +M G L + +P+
Sbjct: 423 YCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPD 482
Query: 491 LMA----------------AF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
A AF L EV+ + T +N +I CK G L DAK
Sbjct: 483 CFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQM 542
Query: 534 RMIFLQFEPNDQTYLSLINGY 554
+M+ +P+ TY LI+ +
Sbjct: 543 KMVHNGLQPDCITYTCLIHAH 563
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 165/398 (41%), Gaps = 25/398 (6%)
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL--KGLQEKIVELESLMNEFGFSSQ 290
GL D E+ E + + + SSF + + L KG +K +L+ M G
Sbjct: 283 GLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPT 342
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
+V Y+++I G ++ G +E+A + G Q D TY ++ G+ + G++K
Sbjct: 343 VVTYNAMIHGLLQSGQVEAAQVKFVEMRAMG--LQPDVI--TYNSLLNGYCKAGSLKEAL 398
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
L + + + V+ ++ +I LG ++A + +EM GC + Y +
Sbjct: 399 LLFGDLRHAGLAPTVLTYNI---LIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILM 455
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
K A A + ++ S GLQ D Y+ I A +T AF L M I
Sbjct: 456 KGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGIS 515
Query: 471 DLKGSYLTIMTGLME----NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
+Y ++ GL + N +L + ++ + + +IHA C+ G L
Sbjct: 516 SDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCIT-----YTCLIHAHCERGLLR 570
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEH 586
+A++ + MI P+ TY I+ Y +S + RK+ +G + + +
Sbjct: 571 EARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWF----RKMLEEGVEPNEITY 626
Query: 587 NLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
N++ ++AL + G + + E + +K+ Y
Sbjct: 627 NVL---IHALCRTGRTQLAYRHFHEMLERGLVPNKYTY 661
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 38/278 (13%)
Query: 383 LSDKAH-----SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV--MDISSSGLQ 435
LSD A ++ EM G + Y L ++ KE R + L+ M+ SG
Sbjct: 212 LSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCL 271
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT---IMTGLMENHRPELM 492
+ ++ +I D + A + MR ++ K S T ++TGL L
Sbjct: 272 PNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK----KASSFTYNPLITGL-------LA 320
Query: 493 AAFLDEVVEDPRVEVKTHD-------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
F+ + +D ++E++ +N++IH ++G++E A+ M + +P+
Sbjct: 321 KGFVKKA-DDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVI 379
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN-LVDAFLYALVKGGFFDA 604
TY SL+NGY A L+++ +++ G +N L+D + + G +
Sbjct: 380 TYNSLLNGYCKAGSLKEALLLFGDLRHA----GLAPTVLTYNILIDGY----CRLGDLEE 431
Query: 605 VMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRK 642
++ E+ E D Y +H +A R+
Sbjct: 432 ARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMARE 469
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 147/343 (42%), Gaps = 21/343 (6%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ A L+G C V +A K+++ MS+ G PN+ + L G ++
Sbjct: 636 RPNVVTYGALLDGFCKS-HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
E+++ M+E GF + + YSSLI Y K+ + AS+ + M ++ + Y
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL------SKMLENSCAPNVVIYT 748
Query: 335 EVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSIL 391
E++ G + G L ++E + +P+ + + GFG+I G + +L
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI------GKIETCLELL 802
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+ M + G + Y + CK A L+ ++ + Y +IE +
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG--FN 860
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK-TH 510
++F + L ++ + Y ++ L++ R E+ L+EV V +
Sbjct: 861 KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 920
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+NS+I + C A ++E A + M P Q++ SLI G
Sbjct: 921 TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 963
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 172/447 (38%), Gaps = 79/447 (17%)
Query: 195 VAFLKVFEECCRIAL-DENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIE 245
V + K+ C +L +E +DF+ PN+ + L GC + + ++V+
Sbjct: 303 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC-LNKKQLGRCKRVLN 361
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY----------- 294
M + G P+ F L + Y G +L M + G V Y
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421
Query: 295 ---------------SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-------- 331
S +++ V L + +S T LC G + +E
Sbjct: 422 DSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 481
Query: 332 ---TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY +V+ +L N + LA L+ E K G+V D ++ + GL ++A
Sbjct: 482 DTSTYSKVL-NYLCNASKMELAFLLFEEMK--RGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+EM GC+ + Y + AY K + + A +L + S G ++ Y ALI+
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF--LDEVVEDPRVE 506
+ + A +F M ++ P++ F D+ E P V
Sbjct: 599 CKAGQVEKACQIFERMCGSK------------------DVPDVDMYFKQYDDNSERPNVV 640
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+ +++ FCK+ R+E+A++ L M EPN Y +LI+G + L
Sbjct: 641 T----YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK----LDE 692
Query: 567 WHEIKRKISTDGQKGIKFEH-NLVDAF 592
E+K ++S G + + +L+D +
Sbjct: 693 AQEVKTEMSEHGFPATLYTYSSLIDRY 719
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 161/394 (40%), Gaps = 34/394 (8%)
Query: 178 ELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDF-MKPNIYACNAALEGCCYGLQS 236
E++G FL + RK+ +F EE R+ DF +P+ N ++
Sbjct: 197 EVFGEFLNVLVRKHCRNGSFSIALEELGRLK-----DFRFRPSRSTYNCLIQAFLKA-DR 250
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ A + MS+ +R + + AY G K E +L+ F VFY+
Sbjct: 251 LDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG---KWREALTLVETENFVPDTVFYTK 307
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFL---QNGNVKGLAN 351
LISG + E A + M + TY ++ G L Q G K + N
Sbjct: 308 LISGLCEASLFEEAMDFL------NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
+++ + PS + + ++ A G A+ +L +M CG G VY +
Sbjct: 362 MMM-MEGCYPSPKIFN-----SLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG 415
Query: 412 AYCKEHRTAEATQLVM------DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
+ C + + L + ++ ++G+ L+ N + ++ ++ AFS+ R+M
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+Y ++ L + EL +E+ V + + ++ +FCKAG +
Sbjct: 476 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV-ADVYTYTIMVDSFCKAGLI 534
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
E A++ M + PN TY +LI+ Y+ A++
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 122/317 (38%), Gaps = 43/317 (13%)
Query: 276 VELESL--MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ LE L + +F F Y+ LI ++K L+SAS I + N+ F+ +
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSAS-LIHREMSLANLRMDGFTLRCF 276
Query: 334 ----CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
C+V K A ++E + P + + +IS L ++A
Sbjct: 277 AYSLCKVGKW--------REALTLVETENFVPDTVFYTK-----LISGLCEASLFEEAMD 323
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
L+ M A C + Y L + + +++ + G +++L+ A
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 450 TSQDFQSAFSLFRDMREAR------IYDL--------KGSYLTIMTGLMENHRPELMAAF 495
TS D A+ L + M + +Y++ K S + L E E++AA
Sbjct: 384 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA- 442
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
V + + +S C AG+ E A +R MI F P+ TY ++N
Sbjct: 443 --------GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 556 TAEQYFSVLMMWHEIKR 572
A + +++ E+KR
Sbjct: 495 NASKMELAFLLFEEMKR 511
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 148/397 (37%), Gaps = 73/397 (18%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK-------------IVELESL 281
+ VS A ++ ETM G PN ++ L + G EK + +++
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Query: 282 MNEFGFSSQ---MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
++ +S+ +V Y +L+ G+ K +E A + L +ME + ++ Y ++
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL----LDAMSMEGCEPNQIVYDALID 682
Query: 339 GFLQNGNVKGLANLIIEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
G + G + EAQ+++ G +I + D A +L +M
Sbjct: 683 GLCKVGKLD-------EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
C+ + +Y + CK +T EA +L+ + G Q +V Y A+I+
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795
Query: 455 QSAFSLFRDMREARI------------YDLKGSYLTIMTGLME----NHRPELMAAF--- 495
++ L M + + K L + L+E H P A +
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 496 --------------LDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
LDE+ +D P + V + +I KA RLE A R L +
Sbjct: 856 IEGFNKEFIESLGLLDEIGQDDTAPFLSV----YRLLIDNLIKAQRLEMALRLLEEVATF 911
Query: 539 QFEPND--QTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
D TY SLI A + + ++ E+ +K
Sbjct: 912 SATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK 948
>gi|356522073|ref|XP_003529674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 685
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 131/316 (41%), Gaps = 15/316 (4%)
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
EK+ + M GVRP+ +F + + L K VE M+ FG V YS++I
Sbjct: 182 EKLFDEMLQRGVRPDNVTFSTIISCARICSLPNKAVEWFEKMSSFGCEPDDVTYSAMIDA 241
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
Y + GN++ A R E+ T+ ++K + GN G N+ E + L
Sbjct: 242 YGRAGNIDMALRLY----DRARTEKWRLDTVTFSTLIKMYGLAGNYDGCLNVYQEMKVL- 296
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
G+ + + ++ A +A SI EM G S Y L+AY + +
Sbjct: 297 --GVKPNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFSPNWVTYASLLRAYGRGRYSE 354
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK----GSY 476
+A + ++ G++++ Y+ L+ AF +F DM+ + S
Sbjct: 355 DALFVYKEMKEKGMEMNTHLYNTLLAMCADLGLANEAFEIFEDMKTSATCLCDSWTFSSL 414
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+TI + E M + E P + V T S++ + K GR +D +T +++
Sbjct: 415 ITIYSCTGNVSEAERMLNEMIESGSQPTIFVLT----SLVQCYGKVGRTDDVVKTFNQLL 470
Query: 537 FLQFEPNDQTYLSLIN 552
L P+D+ L+N
Sbjct: 471 DLGISPDDRFCGCLLN 486
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 147/354 (41%), Gaps = 46/354 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN +A L+G C L + AE V++ M V PN +F + YA KG+ K
Sbjct: 457 LAPNCVTYSALLDGYC-KLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 515
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V++ M + + Y+ LI GY K G + A DF KE
Sbjct: 516 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVA---------------DDFCKE---- 556
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+++++LE S ++ D +++ +G D+A S++ +M
Sbjct: 557 ------------------MKSRRLEESNVIFDI-----LLNNLKRVGRMDEARSLIIDMY 593
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ G + Y + Y KE A +V ++ ++ DV Y+ALI+ + +
Sbjct: 594 SKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD 653
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+ R M E + +Y TI+ + E L+E ++ + +N +
Sbjct: 654 PRYVCSR-MIELGLAPDCITYNTIINTYCIKGKTEDALDILNE-MKSYGIMPNAVTYNIL 711
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
I CK G +E A+ L M+ ++F P T+ L+ Y +E+ +L + HE
Sbjct: 712 IGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQI-HE 764
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 182/413 (44%), Gaps = 32/413 (7%)
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
L+D K N +A L + +E ++N+ F ++ A NA ++G D V
Sbjct: 607 LIDGYFKEGNQLAALSIVQE----MKEKNIRF---DVVAYNALIKGLLR--LGKYDPRYV 657
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
M LG+ P+ ++ + Y +KG E +++ + M +G V Y+ LI G K
Sbjct: 658 CSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCK 717
Query: 304 LGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
G +E A + M +F + T+ +VK + ++ + + +KL
Sbjct: 718 TGAVEKAESAL------DEMLVMEFVPTPITHKFLVKAYSRSEKADKILQI---HEKLVA 768
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
SG+ + +V +I+ LG++ KA +LDEM G S L Y ++ YC +
Sbjct: 769 SGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEK 828
Query: 422 ATQLVMDISSSGLQLDVGNYDALI----EASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
A + + G+ ++ Y+ L+ A + + + L +M E + +Y
Sbjct: 829 ALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYD 888
Query: 478 TIMTGLME-NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+++G +R + + ++ + + +KT +N +I + K+G++ +A+ L ++
Sbjct: 889 ILVSGYGRVGNRKKTIILHIEMITKGFVPTLKT--YNVLISDYAKSGKMIEARELLNDLL 946
Query: 537 FLQFEPNDQTYLSLINGYVT----AEQYFSVLMMWH-EIKRKISTDGQKGIKF 584
PN TY L G++ E S+ + E+K+ + G+KG+KF
Sbjct: 947 TKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGLKF 999
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 178/444 (40%), Gaps = 63/444 (14%)
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
S A M LG+ P + L Y + GL ++ + S M G + + L
Sbjct: 76 STASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVL 135
Query: 298 ISGYVKLGNLESASRTILLCLGG-GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
+ K+G+L+ L LG N + D TY V+ GF Q G V L+ E
Sbjct: 136 VHSLCKVGDLD-------LALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEM 188
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS---VGLGVYVPTLKAY 413
K G+ D ++ +GL A ++ + G + +GL + Y
Sbjct: 189 VK---RGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLI---DGY 242
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM--------- 464
C+ ++AT+L+ + S +++D+ Y+ L++A + D A SLF ++
Sbjct: 243 CEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDR 302
Query: 465 -------REARIYDLKGSYLTIMT---------GLMENH---RPELMAAFLDEVVEDPRV 505
+ I +L+ + +T T G+ E+H + +M + +VV
Sbjct: 303 LKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVT---- 358
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
+SI++ FC+ G+L +A R M + +PN +Y ++IN + +
Sbjct: 359 ------CSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFN 412
Query: 566 MWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYK 625
+ ++ +GI F+ + L K G +V E ++ + + Y
Sbjct: 413 LQSQMV-------VRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTY- 464
Query: 626 QAFMENHKKLKVAKLRKRNFKKME 649
A ++ + KL +L + +KME
Sbjct: 465 SALLDGYCKLGKMELAELVLQKME 488
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/318 (18%), Positives = 127/318 (39%), Gaps = 15/318 (4%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
G +V SS++ G+ + G L A+ G D + +Y ++ ++G
Sbjct: 351 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMG----LDPNHVSYATIINSLFKSGR 406
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
V NL ++ GI D ++ +G + +A + + + +
Sbjct: 407 VMEAFNL---QSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVT 463
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y L YCK + A ++ + + +V + ++I A + R+M
Sbjct: 464 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+ + Y ++ G + ++ F E+ + R+E ++ +++ + GR+
Sbjct: 524 QRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEM-KSRRLEESNVIFDILLNNLKRVGRM 582
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFE 585
++A+ + M +P+ Y SLI+GY + L + E+K +K I+F+
Sbjct: 583 DEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMK-------EKNIRFD 635
Query: 586 HNLVDAFLYALVKGGFFD 603
+A + L++ G +D
Sbjct: 636 VVAYNALIKGLLRLGKYD 653
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 107/506 (21%), Positives = 199/506 (39%), Gaps = 69/506 (13%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIE 134
+H D+A++ + + P V N +I L + F +V +
Sbjct: 37 IHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGT-K 95
Query: 135 KNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNF 194
P ++ F + L+ ++ + AF + + M + +P N
Sbjct: 96 CTPDIITF---NILVDALVKSGRVEEAFQIFESMHTSSQCLP----------------NV 136
Query: 195 VAFLKVFEECCRIA-LD---ENLDFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIE 245
V + V C+ LD E LD M PN+ + +EG C ++ +++
Sbjct: 137 VTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRT-DKGFTLLQ 195
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQ-----EKIVELESLMNEFGFSSQMVFYSSLISG 300
M+ G +P+ + Y L GL ++ +EL LM G +V Y+SL+
Sbjct: 196 EMTRRGFQPD-----VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMEL 250
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEAQK 358
+ + ++ A R I + M + + Y V+ G ++ + +AQ
Sbjct: 251 FCRSKQVDRAFRLIQV------MSERGCPPDVINYNTVIAGLCRDARLD-------DAQA 297
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLS-----------DKAHSILDEMNACGCSVGLGVYV 407
L +V R V I + + GL + A IL+ M GC G Y
Sbjct: 298 LLKQ-MVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYA 356
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
++ C+ ++ +A L+ + S + D+ ++ +I + S D +A+ +F M E
Sbjct: 357 VVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSER 416
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+Y ++ GL + + + +VE R V T +NS++ C GR+E+
Sbjct: 417 ECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVAT--YNSVLDGLCGVGRIEE 474
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLING 553
A R + MI + P+ +Y +LI G
Sbjct: 475 AVRMVEGMIHKECFPDGASYGALIRG 500
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 134/304 (44%), Gaps = 15/304 (4%)
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS-- 311
PNE ++G L + G ++ EL M + G + ++ +I G K G A
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87
Query: 312 -RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
+T+ G D T+ +V +++G V+ + + + S + V
Sbjct: 88 FKTV-----AGTKCTPDII--TFNILVDALVKSGRVEEAFQIF---ESMHTSSQCLPNVV 137
Query: 371 GFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
+ +I+ G D+A +LD MN GC + Y ++ CK RT + L+ ++
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+ G Q DV Y+ L+ S+ A L + M + Y +Y ++M + +
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+ A L +V+ + ++N++I C+ RL+DA+ L++M+ + P+ TY +
Sbjct: 258 D-RAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYST 316
Query: 550 LING 553
+I+G
Sbjct: 317 IIDG 320
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 91/221 (41%), Gaps = 35/221 (15%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I G D+A+ +LDEM G G+ V+ ++ CK R +A ++ +
Sbjct: 36 LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTK 95
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMR-EARIYDLKGSYLTIMTGLMENHRPELM 492
D+ ++ L++A + S + AF +F M ++ +Y T++ GL ++ + +
Sbjct: 96 CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRA 155
Query: 493 AAFLD--------------EVVEDPRVEVKTHD--------------------WNSIIHA 518
LD V+ + + D +N++++
Sbjct: 156 IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
CK+ RL++A ++ MI P TY SL+ + ++Q
Sbjct: 216 LCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQ 256
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 155/386 (40%), Gaps = 33/386 (8%)
Query: 57 QQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL 116
Q+ + Q ++ T L+ + DEA + + + + +P+ NSL+
Sbjct: 195 QEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCR- 253
Query: 117 QDNHNLKRAFASVVYVIEKN--PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYF 174
+ + RAF + + E+ P ++++ TV + G R+A A AL+K M R
Sbjct: 254 --SKQVDRAFRLIQVMSERGCPPDVINYNTV--IAGLCRDARLD-DAQALLKQMVAARCV 308
Query: 175 MPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMK-----PNIYACNAALEG 229
+ + +C K+ A K+ C E L+ MK PN +EG
Sbjct: 309 PDVITYSTIIDGLC-KDWRVDADWKLEAAC------EILEMMKQTGCPPNAGTYAVVIEG 361
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
C +S A ++ M V P+ SSF + + ++ +M+E
Sbjct: 362 LCRARKS-QQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKP 420
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
V Y++LI G K G ++ A R L +E TY V+ G G ++
Sbjct: 421 NPVAYAALIDGLSKGGEVDKAVRVFEL-----MVESFRPGVATYNSVLDGLCGVGRIEEA 475
Query: 350 ANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
++ + ++ P G S G +I + ++A+ + + A G ++ +GVY
Sbjct: 476 VRMVEGMIHKECFPDGA----SYG-ALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYN 530
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSG 433
+ CK+ R ++A + + +G
Sbjct: 531 VLVNELCKKKRLSDAHGVANKLIEAG 556
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 168/432 (38%), Gaps = 91/432 (21%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKI 275
P+++ACN+ L + V A KV + M V N + + KGL + K+
Sbjct: 165 PDVFACNSLLNLLVHH-GKVEIARKVYDEM----VDRNGDVDNYTVCIVT-KGLCKEGKV 218
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SK 330
E L+ + G +VFY++LI GY K G++E A+ L ++ F +
Sbjct: 219 EEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERAN------LLFKELKVKGFLPTV 272
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
+TY ++ F + G + + L++E ++ G+ V + GII A G +A
Sbjct: 273 KTYGAMINAFCKKGKFEAVDKLLVE---MKERGLAVSLQIFNGIIDARFKHGCEIEAADA 329
Query: 391 LDEMNACGCSVGLGVY-----------------------------------VPTLKAYCK 415
+ M GC + Y P + A+ K
Sbjct: 330 VRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSK 389
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
A++L++++S G LD+ Y AL+ + + + A ++ M E I
Sbjct: 390 NGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANI 449
Query: 476 YLTIMTGLMENHR----PELMAAFLDEVVE------------------------------ 501
Y +M+GL + R +L+ LD+ V
Sbjct: 450 YNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTI 509
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
+ ++ + N++I +CK G + DA +RM P++ TY ++I+GYV
Sbjct: 510 ERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLR 569
Query: 562 SVLMMWHEIKRK 573
L M+ + +K
Sbjct: 570 GALRMFGLMLKK 581
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 147/362 (40%), Gaps = 22/362 (6%)
Query: 201 FEECCRIALDENLDFM-----KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
F+ C I + + +M +P++ N + G C V +AE+++E G+ PN
Sbjct: 318 FKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSC-SKGKVREAEELLEHAIRRGLFPN 376
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
+ S+ L + ++ G + EL M+E G + ++ Y +L+ G V G ++ A
Sbjct: 377 KFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVA----- 431
Query: 316 LCLGGGNMEQSDF-SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
L + ME+ Y ++ G + G L++E + + D V +
Sbjct: 432 LTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVE---MLDQNVTPDAFVNATL 488
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
+ + G D+A + G + +K YCK +A + +
Sbjct: 489 VDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVH 548
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
D Y +I+ + D + A +F M + ++ +++ G N +L A
Sbjct: 549 SPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNG--DLNRA 606
Query: 495 FLDEVVEDPR---VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
++V E+ R E + +I FCK G+L A +M+ + PND T+ L+
Sbjct: 607 --EKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLV 664
Query: 552 NG 553
NG
Sbjct: 665 NG 666
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 144/359 (40%), Gaps = 51/359 (14%)
Query: 218 PNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P+ C L C GL V+ A M LG +PN +F L KG ++
Sbjct: 273 PDNATCTLILSALCENGL--VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAF 330
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK---ETY 333
E+ M G+ + +++LI G K G E A R L + +SD K TY
Sbjct: 331 EMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFL------KLVRSDIYKPNVHTY 384
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G+ + + L +++ G+ + + +I+ G D+A+ +++
Sbjct: 385 TSMIGGYCKEDKLNRAEMLF---SRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNL 441
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M+ G + Y + + CK+ R EA +L+ S GL+ D Y LI+ D
Sbjct: 442 MDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSD 501
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A + F M + TG + R N
Sbjct: 502 IKQALAFFCRMNK--------------TGFEADMRLN----------------------N 525
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+I AFC+ ++++++R + ++ L P +TY S+I+GY + L +H +KR
Sbjct: 526 ILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKR 584
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 165/431 (38%), Gaps = 72/431 (16%)
Query: 100 FPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKN--PKLLDFQTVHTLLGSMRNANT 157
F T +LI LS+L +N + RA +I+ P L++F + L+ + +
Sbjct: 271 FIPDNATCTLI--LSALCENGLVNRAIWYFRKMIDLGFKPNLINFTS---LIDGLCKKGS 325
Query: 158 AAPAFALVKCMFKNRYFMPFELWGGFLVDICRKN---SNFVAFLKVFEECCRIALDENLD 214
AF +++ M +N + + +C++ F FLK+ D
Sbjct: 326 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS----------D 375
Query: 215 FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
KPN++ + + G C ++ AE + M G+ PN +++ L + G ++
Sbjct: 376 IYKPNVHTYTSMIGGYCKE-DKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDR 434
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
EL +LM++ GF + Y+++I K SR + E Y
Sbjct: 435 AYELMNLMDDEGFRPNIYTYNAVIDSLCK------KSR----------------APEAYE 472
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+ K F G+ I+ ++ + S I +A + M
Sbjct: 473 LLNKAFSCGLEADGVTYTILIQEQCKQSDI--------------------KQALAFFCRM 512
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
N G + + + A+C++ + E+ +L + S GL Y ++I DF
Sbjct: 513 NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDF 572
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGL----MENHRPELMAAFLDEVVEDPRVEVKTH 510
A F +M+ +Y ++++GL M + +L A +D + P V T
Sbjct: 573 DLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVT- 631
Query: 511 DWNSIIHAFCK 521
+ + +CK
Sbjct: 632 ----LAYEYCK 638
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 124/300 (41%), Gaps = 29/300 (9%)
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLAN------LIIEAQKLEPSGIVVDRSVG 371
+ GN++++ EV++ L+N + G N + ++ Q L PS I ++
Sbjct: 161 IANGNLQKAH-------EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMN---- 209
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
++ + GL D A ++ DEM+ G + + ++ + EA + + +
Sbjct: 210 -CVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQ 268
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
G D ++ A + A FR M + ++ +++ GL + +
Sbjct: 269 RGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 328
Query: 492 MAAFLDEVVEDP-RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ-FEPNDQTYLS 549
L+E+V + + V TH ++I CK G E A R +++ ++PN TY S
Sbjct: 329 AFEMLEEMVRNGWKPNVYTH--TALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTS 386
Query: 550 LINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVV 609
+I GY ++ M++ +K ++G+ N + K G FD +++
Sbjct: 387 MIGGYCKEDKLNRAEMLFSRMK-------EQGLFPNVNTYTTLINGHCKAGNFDRAYELM 439
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 89/207 (42%), Gaps = 10/207 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PNIY NA ++ C ++ +A +++ G+ + ++ L + ++ +
Sbjct: 448 RPNIYTYNAVIDSLCKKSRA-PEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQAL 506
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
MN+ GF + M + LI+ + + ++ + R L + G + +KETY +
Sbjct: 507 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVP----TKETYTSM 562
Query: 337 VKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ G+ + G+ +L ++ ++ G V D +IS + D+A + + M
Sbjct: 563 ISGYCKEGDF----DLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMI 618
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G S V YCK + +A A
Sbjct: 619 DRGLSPPEVTRVTLAYEYCKRNDSASA 645
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 148/358 (41%), Gaps = 15/358 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP A NA L+G + S+ +AE+V++ MS GV P+E+++ L Y G E
Sbjct: 155 IKPRTRAYNALLKGYVK-IGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 213
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L M G +S +++G+ G + A + G F Y
Sbjct: 214 RILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHF----YNV 269
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ F G L + + ++ GI D +I A G D+A + DEM
Sbjct: 270 MIDTF---GKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMR 326
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
C +G Y + +E R ++ ++ GL ++ Y L++ S F+
Sbjct: 327 ESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFK 386
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR---VEVKTHDW 512
A M+ LK S T+ L+ + +A VV+ R +E T
Sbjct: 387 EAVDCIEAMKAD---GLKPSS-TMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVL 442
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
NS+I+AF + R+ +A L+ M P+ TY +L+ + EQ+ V +++ E+
Sbjct: 443 NSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEM 500
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 3/202 (1%)
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
++ V +G A +LDEM+ CG + Y + AY + R A L+ ++ +
Sbjct: 164 ALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD 223
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY-LTIMTGLMENHRPEL 491
G++ + ++ ++Q AF++ R+M + + + Y + I T N
Sbjct: 224 GVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHA 283
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
M AF D + E+ +E WN++I A CK GR + A M TY +I
Sbjct: 284 MDAF-DRMREEG-IEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMI 341
Query: 552 NGYVTAEQYFSVLMMWHEIKRK 573
N +++ V M E+K +
Sbjct: 342 NLLGEEQRWEGVEAMLAEMKEQ 363
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 158/433 (36%), Gaps = 53/433 (12%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
D A + S A L P +LI+ L S + + F E P+ +
Sbjct: 105 DAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNA 164
Query: 145 V---HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
+ + +GS++NA + +C P E LVD + +
Sbjct: 165 LLKGYVKIGSLKNAEQVLDEMS--QCGVA-----PDEATYSLLVDAYTRAGRW------- 210
Query: 202 EECCRIALDE-NLDFMKPNIYACNAALEGCCYGLQSVSDAEK---VIETMSVLGVRPNES 257
E RI L E D +KP+ Y + L G + + +K V+ M GVRP+
Sbjct: 211 -ESARILLKEMEADGVKPSSYVFSRILAG----FRDRGEWQKAFAVLREMHASGVRPDRH 265
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
+ + + ++ M E G +V +++LI + K G + A
Sbjct: 266 FYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRA------- 318
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE----------PSGIVVD 367
+E D +E+ C L + NL+ E Q+ E G+V +
Sbjct: 319 -----IELFDEMRESNCP-----LGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPN 368
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
++ G +A ++ M A G +Y + AY + A +V
Sbjct: 369 IITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVK 428
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ + GL+ ++LI A + AFS+ + M+E + +Y T+M L+
Sbjct: 429 AMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVE 488
Query: 488 RPELMAAFLDEVV 500
+ E + +E++
Sbjct: 489 QFEKVPVIYEEMI 501
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 162/409 (39%), Gaps = 33/409 (8%)
Query: 174 FMP-FELWGGFLVDIC--RKNSNFVAFLKVFEECCRIALDENLDF-MKPNIYACNAALEG 229
F+P E W + C R+ A ++ EE D+ + P++ N L G
Sbjct: 90 FLPDVETWNVLITGYCLAREPEEAFAVIREMEE----------DYGVAPSLKTHNLVLHG 139
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSF-GFLAYLYALKGLQEKIVELESLMNEFGFS 288
C + ++ A ET + G + ++ + +L K +Q+ + +E + G +
Sbjct: 140 LCKSGKVLA-AMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITAN-GCT 197
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKG 348
+ Y++L++G K+G LE A + + G TY ++ G G
Sbjct: 198 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV----VTYTSLIDGL-------G 246
Query: 349 LANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
EA KL G+V+D +I + G +A S+ M + GC +
Sbjct: 247 KEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVV 306
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
+ CK R A ++ + + GL + Y ALI ++ A + M
Sbjct: 307 TLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 366
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
++A +Y ++ GL ++ E AF DE++E + + +N ++ FCKAG
Sbjct: 367 KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE-AGCKPDVYTYNILVSGFCKAGN 425
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ A M PN TY +LI+G Q + + +K +
Sbjct: 426 TDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKER 474
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 3/191 (1%)
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A ++++++ A GC+ + Y L CK R EA L+ I +G DV Y +LI+
Sbjct: 184 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 243
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRV 505
+ A+ LF++M + Y ++ GL++ + P+ + + +
Sbjct: 244 GLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVP 303
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
+V T +++I CKAGR+ A R + M PN+ Y +LI+G A + L
Sbjct: 304 DVVT--LSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 361
Query: 566 MWHEIKRKIST 576
M ++K+ T
Sbjct: 362 MLAQMKKAFCT 372
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 152/372 (40%), Gaps = 36/372 (9%)
Query: 205 CRIA-LDENLDFMK--------PNIYACNAALEGCCYGLQSVS-DAEKVIETMSVLGVRP 254
C++ L+E +D ++ P++ + ++G G + S +A K+ + M++ G+
Sbjct: 211 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG--LGKEKRSFEAYKLFKEMALRGL-- 266
Query: 255 NESSFGFLAYLYALKGLQE--KIVELESL---MNEFGFSSQMVFYSSLISGYVKLGNLES 309
+ Y ++GL + KI + S+ M G +V S++I G K G + +
Sbjct: 267 ---VLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGA 323
Query: 310 ASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A R +ME + Y ++ G + + ++ + +K + +
Sbjct: 324 AVRIF------KSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 377
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
++ +I G + A + DEM GC + Y + +CK T A +
Sbjct: 378 YNI---LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFD 434
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
D+SSS +V Y LI + A F+ M+E Y +++ GL ++
Sbjct: 435 DMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSG 494
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+ E DE+ +T +I CKA R+++A +L I + P+ Y
Sbjct: 495 KLEGGCMLFDEMERSGVANSQTR--TRLIFHLCKANRVDEAV-SLFNAIRKEGMPHPYAY 551
Query: 548 LSLINGYVTAEQ 559
S+I+ + + +
Sbjct: 552 NSIISTLIKSAK 563
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 109/515 (21%), Positives = 211/515 (40%), Gaps = 98/515 (19%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSL-QDNHNLKRAFASVVYVIEKNPKLLDFQTV 145
A++S ++L + P PV N L+ L++L +D +L A + + P D T
Sbjct: 94 AFRSLRALGGAA--PPTPVYNRLL--LAALREDRLDLVEALYKDLLLAGATP---DVFTR 146
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICR--KNSNFVAFLKVFEE 203
+ LL ++ A A + M F L G+ CR ++++ +A L E
Sbjct: 147 NALLEALSAAGRMDLARRVFDAMPARNEFSSGILARGY----CRAGRSADALAVLDAMPE 202
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
N+ CN + G C + V +AE++++ M G+ PN +F
Sbjct: 203 M--------------NLVVCNTVVAGFCREGR-VDEAERLVDRMRAQGLAPNVVTFNGRI 247
Query: 264 YLYALKGLQEKIVELESLMNEFGFS-------SQMVFYSSLISGYVKLGNLESASRTILL 316
G +++E + N+ + V + ++SG+ G ++ A+ + +
Sbjct: 248 SALCKAG---RVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDI 304
Query: 317 CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA--QKLEP------------- 361
GG + + E+Y + G ++NG V L+ E + ++P
Sbjct: 305 MRCGGFLRKV----ESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLC 360
Query: 362 ----------------SGIVVDRSVGF-GIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
SG++ V + ++ A + G + A+ ILDEM GC+ L
Sbjct: 361 KEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLF 420
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y L++ K RT E +L+ +S G LD + + +I+ + + A + M
Sbjct: 421 TYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGM 480
Query: 465 -REAR--IYDLKGSYLTIM--TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAF 519
E R + L S+++++ + + ++ P+ + ++++++A
Sbjct: 481 WNEGRLALRRLGNSFVSLVSDSSISKSCLPDRIT------------------YSTLMNAL 522
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
CK GR ++AK+ L MI P+ Y + I+GY
Sbjct: 523 CKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGY 557
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 163/416 (39%), Gaps = 45/416 (10%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V +A++++ M+ GV+PN ++ + +G + +E + + +V Y+S
Sbjct: 330 VGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTS 389
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
L+ Y GN +A+R + M Q + TY +++ L+ G + L+
Sbjct: 390 LLHAYCSKGNTTAANRIL------DEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLL- 442
Query: 355 EAQKLEPSGIVVDRSVGFGIISA-CVNLGLSDKAHSILDEMNACG--------------- 398
+++ G +D + II C N L + A I+D M G
Sbjct: 443 --ERMSEKGYSLDTASCNIIIDGLCRNSKL-EMAMDIVDGMWNEGRLALRRLGNSFVSLV 499
Query: 399 --------CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
C Y + A CKE R EA + ++++ + D YD I
Sbjct: 500 SDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCM 559
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
A + RDM + SY ++ G E + + + + E+ E +
Sbjct: 560 HGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKG-ISSNVM 618
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+NS+I +FC G + A L M+ + PN ++ LI + FS ++
Sbjct: 619 TYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTAD-FSAAQRVFDV 677
Query: 571 KRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ 626
+ST GQK + + + YA + ++E + EM++ + + YK+
Sbjct: 678 --ALSTCGQKEVLYCLMCTELSTYAR-----WIEAKNILETALEMRISIQSFPYKR 726
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 12/251 (4%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS- 432
+++ G D+A ++D M A G + + + + A CK R EA ++ D+ +
Sbjct: 211 VVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAW 270
Query: 433 --GL-QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
GL + D +D ++ + A L MR SY ++GL++N R
Sbjct: 271 EQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRV 330
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
L E+ + V+ ++ +N I+ CK G+ D +R + P+ TY S
Sbjct: 331 GEAQELLSEMAHEG-VQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTS 389
Query: 550 LINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVV 609
L++ Y + + + E+ QKG + L +L+K G V +++
Sbjct: 390 LLHAYCSKGNTTAANRILDEM-------AQKGCAPNLFTYNVLLQSLLKAGRTTEVERLL 442
Query: 610 EKSQEMKVFVD 620
E+ E +D
Sbjct: 443 ERMSEKGYSLD 453
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 152/349 (43%), Gaps = 20/349 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M P++ + + + G C+ A+ + M +G++P+ ++ G L ++ +G +
Sbjct: 196 MMPDVISYTSLIHGFCHS-GKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEA 254
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--Y 333
EL +M G +V YS+LI G + A++ + +M++ + Y
Sbjct: 255 NELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFM------SMKKLGCRPDAIAY 308
Query: 334 CEVVKGFLQNGNVKGLANL----IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
++KG Q G + +L + + + I D + +I G +A+
Sbjct: 309 GTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANE 368
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+L+ M GC + + Y +K C EHR +EAT L M + G + D Y L++
Sbjct: 369 LLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLC 428
Query: 450 TSQDFQSAFSLFRDM-REARIYDLKG-----SYLTIMTGLMENHRPELMAAFLDEVVEDP 503
+ + A L ++M + Y +K SY I+ GL ++ R + +E ++
Sbjct: 429 QTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEE-MKAQ 487
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+ + ++IH FC +G+ E AK M+ + +P+ T LI+
Sbjct: 488 GIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLID 536
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 145/353 (41%), Gaps = 21/353 (5%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ C ++G C +S A ++ M LG PN + L G + +EL
Sbjct: 562 DVVTCTTLVKGLCMK-HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 620
Query: 279 ESLM----NEFGFSSQ--MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
M + +G + + + YS +I G K G E +R + + + S
Sbjct: 621 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGR-EDEARELFKEMKALGVIPDVIS--- 676
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++ GF ++G K L E + G+ D + +I G +A+ +L+
Sbjct: 677 YTSLIHGFCRSGKWKDAKYLFNEMVDI---GVQPDVTTFSVLIDMLCKEGKVIEANELLE 733
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M GC Y +K C R +EATQL M + G DV Y L++ +
Sbjct: 734 VMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTG 793
Query: 453 DFQSAFSLFRDM-REARIYDLK-----GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ ++A L + M + Y SY I+ GL ++ R + E ++ V
Sbjct: 794 NIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKE-MKALGVI 852
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ S+IH FC++G+LEDAK M+ + N TY +I+G+ Q
Sbjct: 853 PNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQ 905
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 142/331 (42%), Gaps = 26/331 (7%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL-ESLMNEFG-----FSSQ 290
+S+A + +M LG RP+ ++G L G ++L + ++N+ G
Sbjct: 398 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT 457
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN---VK 347
++ YS +I G K E +R + + + S Y ++ GF +G K
Sbjct: 458 LISYSIIIDGLCK-DRREDEARELFEEMKAQGIMPDVIS---YTTLIHGFCLSGKWEKAK 513
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
L N +++ GI D + +I G +A+ +L+ + GC + +
Sbjct: 514 CLFNEMLDV------GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCT 567
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-RE 466
+K C +HR ++ATQL + + G +V L++ S + + A L ++M +
Sbjct: 568 TLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSD 627
Query: 467 ARIYDLKG-----SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
Y + SY I+ GL + R + E ++ V + S+IH FC+
Sbjct: 628 TSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKE-MKALGVIPDVISYTSLIHGFCR 686
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+G+ +DAK M+ + +P+ T+ LI+
Sbjct: 687 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLID 717
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A+ +L+ M GC + + Y +K C EHR +EAT L M + G + D Y L+
Sbjct: 72 EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLM 131
Query: 446 EASITSQDFQSAFSLFRDM-REARIYDLKG-----SYLTIMTGLMENHRPELMAAFLDEV 499
+ + + A L ++M + Y +K SY I+ GL ++ R + E+
Sbjct: 132 KGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEM 191
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+ + S+IH FC +G+ E AK M+ + +P+ T LI+
Sbjct: 192 KAQGMMP-DVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLID 243
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 135/350 (38%), Gaps = 56/350 (16%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
+RP+ ++ L + +G + EL +M + G +V YS+LI G + A+
Sbjct: 50 IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 109
Query: 312 RTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVK----------------GLA--- 350
+ +M++ + TY ++KG Q GN+ G+
Sbjct: 110 WLFM------SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKP 163
Query: 351 -----NLIIEA--------------QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++II+ ++++ G++ D +I + G +KA +
Sbjct: 164 TLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLF 223
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+EM G + + +CKE + EA +L+ + G LD+ Y LI+
Sbjct: 224 NEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMK 283
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP-------- 503
A LF M++ +Y T+M GL + + + E++ D
Sbjct: 284 HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCI 343
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
R +V T +I CK G++ +A L MI + TY +LI G
Sbjct: 344 RPDVTTSSM--LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 391
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 10/175 (5%)
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CKE + EA +L+ + G LD+ Y LI+ A LF M++
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKTH----DWNSIIHAFCKAGRLEDA 528
+Y T+M GL + + E++ D R +K ++ II CK R ++A
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-----IKRKISTDG 578
+ + M P+ +Y SLI+G+ + ++ +++E I+ ++T G
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSG 239
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 217 KPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
KP++ + + ++G C +G + +A ++ + M LGV PN S+ L + + G E
Sbjct: 817 KPDVISYSIIIDGLCKHGRED--EARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 874
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
L + M + G V YS +I G+ K G ++ A
Sbjct: 875 KHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 169/354 (47%), Gaps = 29/354 (8%)
Query: 209 LDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL 268
+D +D PN+ + + + C +V A + M + G N +F L +
Sbjct: 271 MDNGVD---PNVVSYSCIINSLCVS-GNVELAFALFAQMFLRGCDANIHTFTPLIKGCFM 326
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
+G + ++L LM + G +V Y++LI G G+LE A + M++S
Sbjct: 327 RGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVC------DQMQRSGC 380
Query: 329 --SKETYCEVVKGFLQNGNVKGLA---NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ TY ++ GF ++G++ G + N +I + P+ VV + ++ C N +
Sbjct: 381 LPNVTTYSILIDGFAKSGDLVGASETWNRMI-SHGCRPN--VVTYTCMVDVL--CKN-SM 434
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
D+A+S++++M GC+ + +K C R A +L+ + G ++ Y+
Sbjct: 435 FDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNE 494
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
L++A ++ AF LF+++ EAR +L+ + +T T L R +M L ++
Sbjct: 495 LLDALFRMNKYEEAFGLFQEI-EAR--NLQPNLVTYNTVLYGFSRAGMMGEAL-QLFGKA 550
Query: 504 RVEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFL-QFEPNDQTYLSLING 553
V D +N++IHA+CK G+++ A + + R+ + ++ P+ TY SLI G
Sbjct: 551 LVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWG 604
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 150/383 (39%), Gaps = 42/383 (10%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
+ +++ M + G+ E F + Y G E+ +++ + EFG + Y+ L+
Sbjct: 93 VQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLD 152
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
+ + + NM++ TY ++K +N V L +E
Sbjct: 153 ALLSENKFQMINPLYT------NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVE-- 204
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ G D ++S+ G D A + + VY + CKE
Sbjct: 205 -MSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP-----SVPVYNALIDGMCKEG 258
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM----REARIYD-- 471
R A +L+ ++ +G+ +V +Y +I + S + + AF+LF M +A I+
Sbjct: 259 RIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFT 318
Query: 472 --LKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
+KG ++ R +L A L +++ E +N++IH C G LE+A
Sbjct: 319 PLIKGCFM----------RGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
+ +M PN TY LI+G+ + W+ R IS + + +
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWN---RMISHGCRPNVVTYTCM 425
Query: 589 VDAFLYALVKGGFFDAVMQVVEK 611
VD L K FD +VEK
Sbjct: 426 VD----VLCKNSMFDQANSLVEK 444
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 163/437 (37%), Gaps = 54/437 (12%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PN++ N L+ C V A K+ MS G P+ ++ + G +
Sbjct: 173 DGLIPNVFTYNILLKALCKN-DRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI------------------- 314
EL F + Y++LI G K G +E A + +
Sbjct: 232 DARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCII 286
Query: 315 -LLCLGGGNMEQS------------DFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKL 359
LC+ G N+E + D + T+ ++KG G + +L ++
Sbjct: 287 NSLCVSG-NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGC 345
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
EP+ +V ++ G+ S G ++A + D+M GC + Y + + K
Sbjct: 346 EPN-VVAYNTLIHGLCSN----GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDL 400
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A++ + S G + +V Y +++ + F A SL M ++ T
Sbjct: 401 VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTF 460
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ GL N R E L E ++ +N ++ A + + E+A + +
Sbjct: 461 IKGLCGNGRVEWAMKLL-ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKG 599
+PN TY +++ G+ A L ++ K + I + + ++A K
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEALQLFG--KALVRGTAPDSITY-----NTMIHAYCKQ 572
Query: 600 GFFDAVMQVVEKSQEMK 616
G Q+VE+ MK
Sbjct: 573 GKVKIAAQLVERVSSMK 589
>gi|297842697|ref|XP_002889230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335071|gb|EFH65489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 580
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 137/336 (40%), Gaps = 45/336 (13%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D KPN+ L C + A +VIE M G+ P+ S++ +L +G
Sbjct: 103 DGHKPNVAHSTQLLYDLCKA-NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVG 161
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
++L M + GF S V Y++L+ G LG+L +
Sbjct: 162 YAMQLVEKMEDHGFPSNTVTYNALVRGLCMLGSLNQS----------------------- 198
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+ V+ +Q G L P+ + F + +A G +D+A +LDE
Sbjct: 199 LQFVERLMQRG--------------LAPNAF----TYSFLLEAAYKERG-TDQAVKLLDE 239
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
+ A G L Y L +CKE RT +A +L ++ G + +V +Y+ L+
Sbjct: 240 IIAKGGQPNLVSYNVLLTGFCKEGRTDDAMKLFRELPVKGFKANVVSYNILLRCLCCDGR 299
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE--DPRVEVKTHD 511
+ A SL +M +Y ++ L + R E L E+ + + V
Sbjct: 300 WDEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQAMQVLKEMSKGHHHQFRVTATS 359
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+N +I CK G+++ + L MI+ + +PN+ TY
Sbjct: 360 YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY 395
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 128/339 (37%), Gaps = 44/339 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ + N L G C ++ DA K+ + V G + N S+ L G ++
Sbjct: 246 QPNLVSYNVLLTGFCKEGRT-DDAMKLFRELPVKGFKANVVSYNILLRCLCCDGRWDEAN 304
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L + M+ + +V Y+ LI+ G E A + +L + G+ Q + +Y V
Sbjct: 305 SLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQAMQ-VLKEMSKGHHHQFRVTATSYNPV 363
Query: 337 VKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+ + G V + + E ++ +P + I + C + G +A I+ +
Sbjct: 364 IARLCKEGKVDLVVKCLDEMIYRRCKP-----NEGTYSAIGALCEHNGKVQEAFYIIQSL 418
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ Y + + C++ T A QL+ +++ G D Y ALI F
Sbjct: 419 SNKQKCCTHDFYKSVITSMCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMF 478
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A + M E+ E H+P + ++N+
Sbjct: 479 IGAMEVLSIMEES-----------------EYHKPTV------------------DNFNA 503
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+I CK R + A M+ + PN+ TY ++ G
Sbjct: 504 MILGLCKIRRTDLALEVFEMMVGKKRMPNETTYAIIVEG 542
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 116/558 (20%), Positives = 217/558 (38%), Gaps = 56/558 (10%)
Query: 56 QQQQQQTLTQDNIT--SLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHL 113
+ + L D++T S+ L K+ N DEA + F+ + N P N++I
Sbjct: 155 HEMKANGLVPDDVTYTSMMGVLCKA---NRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGY 211
Query: 114 SS---LQDNHNL---KRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKC 167
S + ++L +RA + P ++ + + T LG + A F +K
Sbjct: 212 GSAGKFDEAYSLLERQRAKGCI-------PSVVAYNCILTCLGKKGKTDKALRIFEEMK- 263
Query: 168 MFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAAL 227
R MP ++ + K N A KV R A+ E F PN+ N +
Sbjct: 264 ----RDAMPNLPTYNIIIGMLCKAGNVEAAFKV-----RDAMKEAGLF--PNVRTINIMI 312
Query: 228 EGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGF 287
+ C Q + +A + E M P+ ++F L +G + + M +
Sbjct: 313 DRLCKA-QKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQ 371
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-----TYCEVVKGFLQ 342
+V Y+SLI + K E + M +S S + TY + V F
Sbjct: 372 IPNVVVYTSLIRNFFKCDRKEDGHKMY------KEMMRSGCSPDLMLLNTYMDCV--FKA 423
Query: 343 NGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
KG A ++++ G + D +I + V G + + + + M GC +
Sbjct: 424 GETEKGRALF----EEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLD 479
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
Y + +CK + +A QL+ ++ + G V Y ++++ A+ LF
Sbjct: 480 TRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFE 539
Query: 463 DMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKA 522
+ + I + Y +++ G + R + ++E+++ + + WN ++ KA
Sbjct: 540 EAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKG-LTPNVYTWNCLLDGLVKA 598
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGI 582
+ +A + M L+ PN TY LING ++ + W E+++ +G+
Sbjct: 599 EEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQK-------QGL 651
Query: 583 KFEHNLVDAFLYALVKGG 600
K A + L K G
Sbjct: 652 KPNTITYTAMISGLAKSG 669
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 75/398 (18%), Positives = 143/398 (35%), Gaps = 60/398 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSD-AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P++ A N L C G + +D A ++ E M PN ++ + + G E
Sbjct: 234 PSVVAYNCILT--CLGKKGKTDKALRIFEEMK-RDAMPNLPTYNIIIGMLCKAGNVEAAF 290
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
++ M E G + + +I K L+ A G + + T+C +
Sbjct: 291 KVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSI----FEGMDYKVCSPDGATFCSL 346
Query: 337 VKGFLQNGNVKGLANL---IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+ G + G V + +++A ++ P+ +V +I + H + E
Sbjct: 347 IDGLGKQGRVDDAYRIYERMLDADQI-PNVVVYT-----SLIRNFFKCDRKEDGHKMYKE 400
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M GCS L + + K T + L +I + G D +Y LI + + +
Sbjct: 401 MMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGF 460
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ + L+ M+ D + T +N
Sbjct: 461 ARETYELYYAMK------------------------------------DQGCVLDTRAYN 484
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++I FCK+G++ A + L M + P TY S+++G ++ M++ E K
Sbjct: 485 TVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAK-- 542
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
GI+ + + + K G D V+E+
Sbjct: 543 -----SNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEE 575
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 166/389 (42%), Gaps = 43/389 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P Y C L C + + +A +++ M RP S++ L + G ++++
Sbjct: 24 PTNYTC-VELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLA 82
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-------------SRTIL--LCLGG-G 321
L + M E G+ + ++LI + + G +++A + +L +C+ G
Sbjct: 83 LFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFG 142
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNV--KGLANLIIEAQKLEPSGIVVD-----RSVGFG- 373
+ + D + + + E+ L +V + ++ +A +L+ + + + R V
Sbjct: 143 KVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAY 202
Query: 374 ----IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
+I + G D+A+S+L+ A GC + Y L K+ +T +A ++ ++
Sbjct: 203 AYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM 262
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+ ++ Y+ +I + + ++AF + M+EA ++ + ++ L + +
Sbjct: 263 KRDAMP-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQK- 320
Query: 490 ELMAAFLDE---VVEDPRVEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
LDE + E +V + D + S+I K GR++DA R RM+ PN
Sbjct: 321 ------LDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPN 374
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
Y SLI + ++ M+ E+ R
Sbjct: 375 VVVYTSLIRNFFKCDRKEDGHKMYKEMMR 403
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 97/247 (39%), Gaps = 14/247 (5%)
Query: 222 ACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELES 280
A N ++G C V+ A +++E M +G P ++G + L + L E + E
Sbjct: 482 AYNTVIDGFCKS-GKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEE 540
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
+ G V YSSLI G+ K+G ++ A + M Q + Y
Sbjct: 541 AKSN-GIELNQVIYSSLIDGFGKVGRVDEAYLVM------EEMMQKGLTPNVY---TWNC 590
Query: 341 LQNGNVKG--LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
L +G VK + ++ Q ++ ++ +I+ + +KA EM G
Sbjct: 591 LLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQG 650
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
Y + K A+A+ L +SG D +Y+A+IE + A+
Sbjct: 651 LKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAY 710
Query: 459 SLFRDMR 465
LF + R
Sbjct: 711 QLFEETR 717
>gi|356574119|ref|XP_003555199.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Glycine max]
Length = 942
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 173/429 (40%), Gaps = 72/429 (16%)
Query: 198 LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNES 257
L++F+ CR+ P + + + G C S A ++ M GV P+
Sbjct: 297 LQLFDIMCRVGF-------TPPVSLFDVLIGGLCRNGDS-HRALSLLSEMKEFGVTPDVG 348
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
F L + +G+ K+ LE + + ++ Y+++++ YV G ++ A R + +
Sbjct: 349 IFTKLISAFPDRGVIAKL--LEEVPGGEEERTLVLIYNAVLTCYVNDGLMDEACRFLRMM 406
Query: 318 L---GGGNMEQSDF----------SKETYCEVVKGFLQNGNV------------------ 346
+ G+++ F + ++ V+ G L+N +
Sbjct: 407 IQSKASGDVQMDGFFNKVKKLVFPNGASFSIVINGLLKNDQLDLALSLFNDMKQFVDRPS 466
Query: 347 ----KGLANLIIEAQKLEPSGIVVDRSVGFGI---------ISACVN-----LGLSDKAH 388
L N + ++ +LE S ++ G+ I C+ LG D
Sbjct: 467 VLIYNNLINSLCDSNRLEESRELLREMKESGVEPTHFTYNSIYGCLCKRKDVLGAID--- 523
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+L M ACG + +K C EA + + G D+ +Y A I
Sbjct: 524 -MLKGMRACGHEPWIKNSTLLVKELCDHGMAIEACNFLDSMVQQGFLPDIVSYSAAIGGL 582
Query: 449 ITSQDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PR 504
I Q+ A LF D+ D+ S + +M GL + +R LDE+V P
Sbjct: 583 IQIQELNRALQLFSDLYSRGHCPDVVASNI-LMRGLCKAYRVREAEKLLDEIVVKGFFPS 641
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
V +N +I ++CK G ++ A L RM EPN TY +L++G+ AE+ L
Sbjct: 642 VVT----YNLLIDSWCKNGSVDKAMALLSRMSGEDREPNVITYSTLVDGFCRAERPDDAL 697
Query: 565 MMWHEIKRK 573
++W+E++RK
Sbjct: 698 LVWNEMERK 706
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 93/446 (20%), Positives = 182/446 (40%), Gaps = 58/446 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN Y N LE + V E +E M G ++ + L Y ++ +
Sbjct: 171 PNDYCYNCLLEALSKSGE-VDLIEARLEEMKGFGWEFDKFTLTPLLQAYCNARRFDEALR 229
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ ++M E G+ V S L + K G+++ A + G G +++T+C ++
Sbjct: 230 VYNVMREKGWVDGHV-CSMLALSFSKWGDVDKAFELVERMEGHG----MRLNEKTFCVLI 284
Query: 338 KGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
GF++ G V L I+ P + D +G C N G S +A S+L EM
Sbjct: 285 HGFVKEGRVDRALQLFDIMCRVGFTPPVSLFDVLIG----GLCRN-GDSHRALSLLSEMK 339
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + +G++ + A+ A+ + V + + Y+A++ +
Sbjct: 340 EFGVTPDVGIFTKLISAFPDRGVIAKLLEEVPGGEEERTLVLI--YNAVLTCYVNDGLMD 397
Query: 456 SAFSLFRDMREAR-----------------IYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
A R M +++ ++ S+ ++ GL++N + +L + ++
Sbjct: 398 EACRFLRMMIQSKASGDVQMDGFFNKVKKLVFPNGASFSIVINGLLKNDQLDLALSLFND 457
Query: 499 V---VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+ V+ P V + +N++I++ C + RLE+++ LR M EP TY S+
Sbjct: 458 MKQFVDRPSVLI----YNNLINSLCDSNRLEESRELLREMKESGVEPTHFTYNSIYGCLC 513
Query: 556 TAEQYFSVLMMW-------HEIKRKISTDGQKGIKFEHNLVDA--FLYALVKGGFFD--- 603
+ + M HE K ST K + ++A FL ++V+ GF
Sbjct: 514 KRKDVLGAIDMLKGMRACGHEPWIKNSTLLVKELCDHGMAIEACNFLDSMVQQGFLPDIV 573
Query: 604 -------AVMQVVEKSQEMKVFVDKW 622
++Q+ E ++ +++F D +
Sbjct: 574 SYSAAIGGLIQIQELNRALQLFSDLY 599
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 100/253 (39%), Gaps = 13/253 (5%)
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACG-CSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
++GF +I + GL+ +AH + DEM G C Y L+A K +
Sbjct: 139 ALGF-LIRCLGHAGLAREAHHLFDEMRLKGLCVPNDYCYNCLLEALSKSGEVDLIEARLE 197
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
++ G + D L++A ++ F A ++ MRE D ++ M L +
Sbjct: 198 EMKGFGWEFDKFTLTPLLQAYCNARRFDEALRVYNVMREKGWVD---GHVCSMLALSFSK 254
Query: 488 RPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
++ AF L E +E + + + +IH F K GR++ A + M + F P
Sbjct: 255 WGDVDKAFELVERMEGHGMRLNEKTFCVLIHGFVKEGRVDRALQLFDIMCRVGFTPPVSL 314
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVM 606
+ LI G L + E+K + G+ + + + A G ++
Sbjct: 315 FDVLIGGLCRNGDSHRALSLLSEMK-------EFGVTPDVGIFTKLISAFPDRGVIAKLL 367
Query: 607 QVVEKSQEMKVFV 619
+ V +E + V
Sbjct: 368 EEVPGGEEERTLV 380
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 137/338 (40%), Gaps = 43/338 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN+ N ++ C G + A + + M GV P+ +F L + + GL E
Sbjct: 267 KPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQ 326
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+ + M G + +++LI K G +E A+ +I+ + G N+ + TY +
Sbjct: 327 RVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAA-SIMTTMRGKNISPNVV---TYSTM 382
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ G+ G + I ++ SG+ DR +I LG D A +M
Sbjct: 383 IDGY---GKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMER 439
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + Y + AY K+ + +A L + GL +V Y ALI++ + Q
Sbjct: 440 VGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQD 499
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
++F + + A + +P+++ ++S+I
Sbjct: 500 VSNVFTEFKRAGL------------------KPDVVL------------------YSSLI 523
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ CK G +EDA L+ M +PN TY SLI+ Y
Sbjct: 524 DSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY 561
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 145/333 (43%), Gaps = 23/333 (6%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQN 343
GF + + YS+++S Y + G A + M+++ TY ++ +
Sbjct: 230 GFGNNVYAYSAMVSAYGRSGRCREALKVFQA------MKKAGCKPNLITYNTIIDACGKG 283
Query: 344 G-NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
G ++K ++ E QK G+ DR +I+ C GL + + + EM G
Sbjct: 284 GVDLKQALDIFDEMQK---EGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQD 340
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+ + + A CK + A ++ + + +V Y +I+ F+ A SL+
Sbjct: 341 IFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYH 400
Query: 463 DMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
DM+E+ + + SY T++ + R + + A D + +V T+ N++I A+ K
Sbjct: 401 DMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTY--NALIDAYGK 458
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKG 581
G+ +DA +M PN TY +LI+ Y A + V ++ E KR G
Sbjct: 459 QGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKR-------AG 511
Query: 582 IKFEHNLVDAFLYALVKGGFF-DAVMQVVEKSQ 613
+K + L + + + K G DAV+ + E +Q
Sbjct: 512 LKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQ 544
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 147/352 (41%), Gaps = 21/352 (5%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + P++ NA + G C + V A +++ M +PN +F L G
Sbjct: 365 DGIFPSVITYNALINGYCKDGRVVP-AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-- 331
K V L M + G S +V Y+ LI G + G++ A + + +M D +
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLT------SMNSFDLEPDCL 477
Query: 332 TYCEVVKGFLQNGNVK-GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
T+ ++ F + G A L + +K GI +D G +I N+G + A I
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRK----GISLDEVTGTTLIDGVCNVGKTRDALFI 533
Query: 391 LD---EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
L+ +M L V + L CK E ++ I+ GL V Y L++
Sbjct: 534 LETLVKMRMLTTPHSLNVILDMLSKGCK---LKEELAMLGKINKLGLVPSVVTYTTLVDG 590
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
I S D +F + M+ + Y I+ GL + R E L ++D V
Sbjct: 591 LIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL-SAMQDSGVSP 649
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ ++ + G+L+ A T+R M+ +E ND+ Y SL+ G+V +++
Sbjct: 650 NHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQK 701
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 1/181 (0%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I A + GL DKA ++ DEM A GC + Y + C++ + EA + + G
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDG 366
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ V Y+ALI AF L M + ++ +M GL +P
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
L ++ D + +N +I C+ G + A + L M EP+ T+ ++IN
Sbjct: 427 HLLKRML-DNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINA 485
Query: 554 Y 554
+
Sbjct: 486 F 486
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 213 LDFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
L+ MK PN+Y + G C V +AEK++ M GV PN ++ + Y
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQ-FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV--KLGNLESASRTI------LLCLG 319
G ++ +E M E G+ YSSL+ G+V + G E+ I + LG
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLG 722
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
G F C+ + NG V Q + SG+ +++++ + S C
Sbjct: 723 GSTSGLCIFLVTRLCKEGRTDESNGLV----------QTILKSGVFLEKAIDIIMESYC- 771
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC-------KEHRTAEATQLVMDISSS 432
S K H+ E+ G +VP+ K++C KE T A +LVM++ +S
Sbjct: 772 ----SKKKHTKCVELITLVLKSG---FVPSFKSFCLVIQGLKKEGDTERARELVMELLTS 824
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 76/195 (38%), Gaps = 2/195 (1%)
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
E SG ++ ++ + L L A+ M A G VG+ Y + A CK T
Sbjct: 152 EVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYT 211
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-REARIYDLKGSYLT 478
A + I G LD +L+ + + A +F M RE SY
Sbjct: 212 EAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSI 271
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ GL E R E D++ E + T + +I A C G ++ A MI
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKG-CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIAR 330
Query: 539 QFEPNDQTYLSLING 553
+PN TY LI+G
Sbjct: 331 GCKPNVHTYTVLIDG 345
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 149/356 (41%), Gaps = 15/356 (4%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
K+F + R + ++D +CN L + + A KV E LGV N S
Sbjct: 192 KLFHKLLRYGVVVSVD-------SCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVS 244
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ + G + L M + G +V Y ++SGY ++G L+ + ++ L
Sbjct: 245 CNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLK-LVDEL 303
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
G ++ ++ Y ++ +NG V L+ +K G+ D V +IS
Sbjct: 304 KGKGLKPDEY---IYNNIILLLCKNGEVVEAEQLLRGMRKW---GVFPDNVVYTTVISGF 357
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
LG A + DEM + Y + CK + EA ++ ++ GL+ D
Sbjct: 358 CKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDE 417
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
Y ALI+ + + + AFS+ M + + +Y + GL +N ++ L E
Sbjct: 418 VTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHE 477
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ ++ + +N+I++ CK G +E + + M F P+ TY +L++ Y
Sbjct: 478 MSRK-GLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAY 532
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 168/405 (41%), Gaps = 38/405 (9%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE--KI 275
P+ + G C L +VS A K+ + M + P+ + Y + G+ + K+
Sbjct: 345 PDNVVYTTVISGFC-KLGNVSAACKLFDEMRRKKIVPD-----IVTYTSVIHGICKSGKM 398
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
VE + NE G V Y++LI GY K G ++ A M Q +
Sbjct: 399 VEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSV------HNQMVQKGLTPNV 452
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY + G +NG + L+ E + L+P+ + I++ +G ++
Sbjct: 453 VTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYN-----TIVNGLCKIGNIEQTV 507
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+++EM+ G Y + AYCK A+A +L+ + + LQ + ++ L+
Sbjct: 508 KLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGF 567
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG--LMENHRPELMAAFLDEVVEDPRVE 506
S + L M E I ++ ++M + N R + + + D V
Sbjct: 568 CMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRA---TTEIYKAMHDRGVM 624
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
++ +N +I CKA +++A + M+ + TY +LI G+ +++ +
Sbjct: 625 PDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKL 684
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
+ E+++ G+ E ++ D F+ + G ++ +++ ++
Sbjct: 685 FEEMRK-------HGLVAEKDIYDIFVDVNYEEGNWEITLELCDE 722
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 144/350 (41%), Gaps = 82/350 (23%)
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESL---MNEFGFSSQMVFYSSLI 298
K+++ + G++P+E + + L G ++VE E L M ++G V Y+++I
Sbjct: 298 KLVDELKGKGLKPDEYIYNNIILLLCKNG---EVVEAEQLLRGMRKWGVFPDNVVYTTVI 354
Query: 299 SGYVKLGNLESASR------------------TIL--LCLGGGNMEQSDFSKE------- 331
SG+ KLGN+ +A + +++ +C G +E + E
Sbjct: 355 SGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLE 414
Query: 332 ----TYCEVVKGFLQNGNVK---GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
TY ++ G+ + G +K + N +++ + L P+ +V ++ G+ C N G
Sbjct: 415 PDEVTYTALIDGYCKAGEMKEAFSVHNQMVQ-KGLTPN-VVTYTALADGL---CKN-GEI 468
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D A+ +L EM+ G + Y + CK + +L+ ++ +G D Y L
Sbjct: 469 DVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTL 528
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
++A + A L R M R+ +P L+
Sbjct: 529 MDAYCKMGEMAKAHELLRIMLNKRL------------------QPTLVT----------- 559
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N +++ FC +G LED +R + M+ PN T+ SL+ Y
Sbjct: 560 -------FNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQY 602
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 369 SVGFGIISACV-NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+V I+ C+ LG +AH++L +M G + Y + YC+ + +LV
Sbjct: 242 TVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVD 301
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
++ GL+ D Y+ +I + + A L R MR+ ++ Y T+++G +
Sbjct: 302 ELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLG 361
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
DE+ ++ + S+IH CK+G++ +A+ M+ EP++ TY
Sbjct: 362 NVSAACKLFDEM-RRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTY 420
Query: 548 LSLINGYVTA---EQYFSV 563
+LI+GY A ++ FSV
Sbjct: 421 TALIDGYCKAGEMKEAFSV 439
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 16/264 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ A +G C + A +++ MS G++PN ++ + G E+
Sbjct: 448 LTPNVVTYTALADGLCKN-GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQT 506
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V+L M+ GF + Y++L+ Y K+G + A + + L ++ + T+
Sbjct: 507 VKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLN----KRLQPTLVTFNV 562
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA-CVNLGLSDKAHSILDEM 394
++ GF +G ++ LI + + GI+ + + ++ C+ + I M
Sbjct: 563 LMNGFCMSGMLEDGERLI---EWMLEKGIMPNATTFNSLMKQYCIKNNMRATTE-IYKAM 618
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ G Y +K +CK EA L ++ G + YDALI + F
Sbjct: 619 HDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKF 678
Query: 455 QSAFSLFRDMR------EARIYDL 472
A LF +MR E IYD+
Sbjct: 679 VEARKLFEEMRKHGLVAEKDIYDI 702
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Query: 181 GGFLVDICRKNSNFVAFLKVFE-----ECCRIALDENLDFMKPNIYACNAALEGCCYGLQ 235
GF D + A+ K+ E E RI L++ L +P + N + G C
Sbjct: 516 AGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRL---QPTLVTFNVLMNGFCMS-G 571
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+ D E++IE M G+ PN ++F L Y +K E+ M++ G Y+
Sbjct: 572 MLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYN 631
Query: 296 SLISGYVKLGNLESA 310
LI G+ K N++ A
Sbjct: 632 ILIKGHCKARNMKEA 646
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 149/356 (41%), Gaps = 50/356 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKI 275
PN++ N ++G C S+ A +++ +S G+RP+ + Y + GL + ++
Sbjct: 328 PNLFTFNIFIQGLCKE-GSLDRAVRLLGCVSREGLRPD-----VVTYNTVICGLCRKSRV 381
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
VE E +++ GF Y+S+I GY K G + A+R + + G + +F T
Sbjct: 382 VEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKG-FKPDEF---T 437
Query: 333 YCEVVKGFLQNGN--------------------------VKGLA--NLIIEAQKL----E 360
YC +V GF Q+G+ +KGL LI+ A +L
Sbjct: 438 YCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMA 497
Query: 361 PSGIVVDRSVGFGIISACVNLG-LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
G D II+ +G LSD H I D + GC + Y + YC++ +
Sbjct: 498 EKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITK-GCIPDIFTYNTLVDGYCRQLKL 556
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A +LV + S G+ DV Y+ L+ + + +F+ M E +Y TI
Sbjct: 557 DSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTI 616
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
+ L + + L E ++ + + ++I FCK G L+ A R M
Sbjct: 617 IESLCNSKKVNEAVDLLGE-MKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGM 671
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 145/366 (39%), Gaps = 27/366 (7%)
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
Y KG ++ V+ M+ F + Y+++++ V+ G A + + M+
Sbjct: 164 FYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYM------RMK 217
Query: 325 QSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ TY +K F + G L+ + + G + +++ G
Sbjct: 218 DKKVESDVYTYTIRIKSFCRTGRPYAALRLL---RNMPVLGCFSNAVAYCTVVTGFYEFG 274
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+D+A + DEM C + + + A CK+ E+ +L + G+ ++ ++
Sbjct: 275 DNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFN 334
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
I+ A L + + +Y T++ GL R L ++V +
Sbjct: 335 IFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMV-N 393
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV---TAEQ 559
E +NSII +CK G + DA R L+ +F F+P++ TY SL+NG+ +Q
Sbjct: 394 GGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQ 453
Query: 560 YFSVLMMWHEIKRKISTDG-QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVF 618
+V DG KG++ + + + L + G +Q++ + E
Sbjct: 454 AMAVF-----------KDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCK 502
Query: 619 VDKWKY 624
D W Y
Sbjct: 503 PDIWTY 508
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/507 (20%), Positives = 193/507 (38%), Gaps = 59/507 (11%)
Query: 83 NTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDF 142
+ D A + F + L P N L+ L +R F V+ K +
Sbjct: 275 DNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVL----KRGVCPNL 330
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE 202
T + + + + A L+ C+ + + + +CRK+ A E
Sbjct: 331 FTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEA-----E 385
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSF-- 259
EC ++ + PN + N+ ++G C G+ V DA ++++ G +P+E ++
Sbjct: 386 ECLHKMVNGGFE---PNDFTYNSIIDGYCKKGM--VVDANRILKDAVFKGFKPDEFTYCS 440
Query: 260 ---GF-------------------------LAYLYALKGL--QEKIVELESLMNEF---G 286
GF + Y +KGL Q I+ LMNE G
Sbjct: 441 LVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV 346
+ Y+ +I+G K+G L A+ I + G + TY +V G+ + +
Sbjct: 501 CKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDI----FTYNTLVDGYCRQLKL 556
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
L+ ++ G+ D +++ S++ I M GC+ + Y
Sbjct: 557 DSAIELV---NRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITY 613
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-R 465
+++ C + EA L+ ++ S GL DV ++ LI D A+ LFR M +
Sbjct: 614 NTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEK 673
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+ + +Y I++ E ++ E+ ++ + + + +I FCK G +
Sbjct: 674 QYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNG-CDPDNYTYRVLIDGFCKTGNV 732
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+ L I F P+ T+ ++N
Sbjct: 733 NQGYKFLLENIEKGFIPSLTTFGRVLN 759
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 121/317 (38%), Gaps = 12/317 (3%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A +++ M VLG N ++ + + G ++ EL M E + ++ L+
Sbjct: 244 ALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVH 303
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQ 357
K G + + R L G + T+ ++G + G++ L+ + +
Sbjct: 304 ALCKKGFVLESERLFDKVLKRGVCP----NLFTFNIFIQGLCKEGSLDRAVRLLGCVSRE 359
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
L P + + +I +A L +M G Y + YCK+
Sbjct: 360 GLRPDVVTYNT-----VICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKG 414
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+A +++ D G + D Y +L+ D A ++F+D + Y
Sbjct: 415 MVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYN 474
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
T++ GL + ++E+ E + +N II+ CK G L DA + I
Sbjct: 475 TLIKGLCQQGLILPALQLMNEMAEKG-CKPDIWTYNLIINGLCKMGCLSDANHLIGDAIT 533
Query: 538 LQFEPNDQTYLSLINGY 554
P+ TY +L++GY
Sbjct: 534 KGCIPDIFTYNTLVDGY 550
>gi|357127910|ref|XP_003565620.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Brachypodium distachyon]
Length = 1088
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 136/365 (37%), Gaps = 65/365 (17%)
Query: 249 VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLE 308
V G P + + L +G ++ EL S M + G VFYSSL+ GY+ G L
Sbjct: 195 VCGFEPGLMTLTAVVNLLGREGKIGEVAELVSEMEQKGMIGDAVFYSSLVHGYMTGGLLM 254
Query: 309 SASRTILLCLGGG-----------------------------NMEQSDFSKE--TYCEVV 337
R L L G ME+S TY +V
Sbjct: 255 EGLREHRLMLDKGIAADVVNYTTVIDGMCREGSVDKVMGFLDEMERSGAKPNLITYTSLV 314
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
GF + ++ +++ +KLE G+VVD V +I + +G DKA +L EM
Sbjct: 315 GGFCKRNRLEDAFSVV---RKLEQKGVVVDEYVYSILIDSLCKMGDLDKAFCLLGEMEGK 371
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS--------------------------- 430
G G Y + CK T A ++ ++
Sbjct: 372 GIKAGTVTYNTVIDGLCKAGDTNNAIEISQGVAADNFTYSMLLHGCIKGEDSTGIMAIKS 431
Query: 431 ---SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
SSG+ +DV + LI+A A SLF MR+ + +Y TI+ + +
Sbjct: 432 RLESSGIAVDVVTCNILIKALFMVNKMDDACSLFHRMRDMGLSPNTVTYHTIINMMCKLG 491
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
DE +D + T N +I A C G++ A++ +I + P+ TY
Sbjct: 492 DIGRAVELFDEYKKDKSLS-GTAVHNVLIGALCNGGKVNIAEQIFYDLIHKKLRPDSCTY 550
Query: 548 LSLIN 552
LI+
Sbjct: 551 RKLIH 555
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 103/229 (44%), Gaps = 13/229 (5%)
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV---NLGLSD 385
+ +T+ +++K L+NG + + L+ E K+ G+ R + ++S + N+G +
Sbjct: 616 TSKTFYKLLKSLLRNGYDQVIQPLLSEFTKIH--GLNEPRMIN--MLSCHLSKKNVGAAI 671
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+ S +D CSV + V + A KE +A + SG +D+ Y ++
Sbjct: 672 RFSSYMDN-----CSVPVSVLRGAVYALKKEGEILDAYNFLEQAEQSGFSVDLAMYSIVV 726
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
E + A L M++ I+ + ++++GL + H A L + +E +
Sbjct: 727 EGLCRGGYLEKALDLCETMQKEGIHPTIIVHNSVLSGLCQ-HGCFTEAFRLFDYLESSNI 785
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ +I A C+ G L+DA + +++M P + Y LI+GY
Sbjct: 786 LPTIITYAILIGALCREGFLDDAYQLIQKMSNKGIRPTTRVYNLLISGY 834
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 175/416 (42%), Gaps = 56/416 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ N ++ C +++ AE V+ M+ G +P+ ++ + + YA G ++
Sbjct: 296 VKPDVVTYNLIIDALCKA-RAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEA 354
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++ M + G +V +S ++ K G + A+ G+ + FS YC
Sbjct: 355 AKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGH-KPDIFS---YCT 410
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ G A++I ++ +GI + V +I A G+ D A I EM
Sbjct: 411 LLHGYASEGC---FADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQ 467
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G S + Y + + + R +A + + + G+Q + Y ++I+
Sbjct: 468 QQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLV 527
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM--AAFLDEVVEDPRVEVKTHD-- 511
A L +M I G+ RP+++ ++ ++ + +D RV + HD
Sbjct: 528 KAKELVSEM--------------INKGI---PRPDIVFFSSVINSLCKDGRV-MDAHDIF 569
Query: 512 --------------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+NS+I +C G+++ A + L M + EP+ TY +L++GY
Sbjct: 570 DLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKN 629
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
+ L ++ E++R KG+K + Y ++ G F A V + +
Sbjct: 630 GRINDGLTLFREMQR-------KGVK-----PNTVTYGIMLAGLFRAGRTVAARKK 673
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 149/373 (39%), Gaps = 49/373 (13%)
Query: 217 KPNIYA-CNA----ALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL 271
KP+I++ C A EGC +D + +M G+ N F L + YA +G+
Sbjct: 402 KPDIFSYCTLLHGYASEGC------FADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGM 455
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------SRTIL-------- 315
+ + + + M + G S +V YS++IS + ++G L A +R I
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSS 515
Query: 316 ----LCLGGGNMEQSDFSKET------------YCEVVKGFLQNGNVKGLANLIIEAQKL 359
C+ GG ++ + E + V+ ++G V ++ A +
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDI 575
Query: 360 -EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
E G++ S+ I C+ +G DKA ILD M G + Y L Y K R
Sbjct: 576 GERPGVITFNSL---IDGYCL-VGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGR 631
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
+ L ++ G++ + Y ++ + +A F +M E+ Y
Sbjct: 632 INDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGI 691
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
I+ GL N+ + A L + + V+ N++I+A K R E+AK +
Sbjct: 692 ILGGLCRNNCAD-EAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISAS 750
Query: 539 QFEPNDQTYLSLI 551
PN+ TY +I
Sbjct: 751 GLLPNESTYGVMI 763
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 132/338 (39%), Gaps = 20/338 (5%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN 283
N L+ CY ++ ++ MS LG PN S+ + + ++ ++L +M
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA 255
Query: 284 EFG--FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKG 339
+ G S +V YS++I G+ G A C M + + TY ++
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKA------CSLFHEMTRQGVKPDVVTYNLIIDA 309
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
L A L++ +++ G D +I LG +A + EM G
Sbjct: 310 -LCKARAMDKAELVL--RQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGL 366
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
+ L + CK R+ EA + +++ G + D+ +Y L+ + F
Sbjct: 367 IPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIG 426
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRPELM---AAFLDEVVEDPRVEVKTHDWNSII 516
LF M+ I + + T L+ + M A + ++ V ++++I
Sbjct: 427 LFNSMKSNGI----AANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVI 482
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
F + GRL DA +M+ +PN Y S+I G+
Sbjct: 483 STFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGF 520
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 410 LKAYCKEHRTAEATQLVMD-ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE-- 466
LK C +RT EA +++ +S G + +Y +++A + Q A L + M +
Sbjct: 199 LKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQG 258
Query: 467 -ARIYDLKGSYLTIMTGLM-ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
A D+ +Y T++ G E + + F + + + +V T +N II A CKA
Sbjct: 259 GACSPDVV-AYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVT--YNLIIDALCKARA 315
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF 584
++ A+ LR+M +P+ TY +I+GY T + M+ E+K+ +G+
Sbjct: 316 MDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKK-------RGLIP 368
Query: 585 EHNLVDAFLYALVKGG-------FFDAV 605
++FL +L K G FFD++
Sbjct: 369 NIVTCNSFLASLCKHGRSKEAAEFFDSM 396
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 124/299 (41%), Gaps = 24/299 (8%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V DA + + + +G RP +F L Y L G +K ++ M G +V Y++
Sbjct: 562 VMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNT 621
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
L+ GY K G + M++ T V G + G + A + A
Sbjct: 622 LLDGYFKNGRINDGLTLFR------EMQRKGVKPNT---VTYGIMLAGLFR--AGRTVAA 670
Query: 357 QK----LEPSGIVVDRSVGFGII--SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
+K + SG V S+ +GII C N +D+A + ++ + + +
Sbjct: 671 RKKFHEMIESGTTVTVSI-YGIILGGLCRN-NCADEAIILFQKLGTMNVKFSITILNTMI 728
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
A K R EA +L IS+SGL + Y +I + + A ++F M ++ I
Sbjct: 729 NAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGI- 787
Query: 471 DLKGSYL--TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+ GS L I+ L+E +L + V+ R+ ++ + ++ F + G+ ++
Sbjct: 788 -VPGSRLLNRIIRMLLEKGEIAKAGNYLSK-VDGKRILLEASTTSLMLSLFSRKGKYQE 844
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 159/354 (44%), Gaps = 55/354 (15%)
Query: 193 NFVAFLKVFEECCRIA--------LDENLD-FMKPNIYACNAALEGCCY-GLQSVSDAEK 242
N ++ + +E C+I +E +D ++P++ +A ++ C G+ V +A+K
Sbjct: 236 NIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGM--VIEAKK 293
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+ETM + G+ P+ +F L + L G + EL M G+ ++ Y+ LI GY
Sbjct: 294 FLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYC 353
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
K N+E A + L G +T+C ++KG G V +A+KL
Sbjct: 354 KTFNVEEAMKLYNEMLRVGKWPDM----KTFCVLLKGLFLAGKVG-------DAKKL--- 399
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
FG++ K H++ + C V+ L CK EA
Sbjct: 400 ---------FGVV----------KPHAVPKNLYIC------SVF---LDGLCKNGCLFEA 431
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+L ++ S ++LD+ +++ LI+ ++ ++A+ LF + + + +Y ++ G
Sbjct: 432 MELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMING 491
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+N + + A L +++E+ +++++H F K +LE+ + L +MI
Sbjct: 492 FCKNGQVD-NANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMI 544
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y +K C EHR +EAT+L + + G +V Y LI+ + + A L ++M
Sbjct: 164 YTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEML 223
Query: 466 EA-RIYDLKG-----SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAF 519
Y + SY I+ L + + + +E+V D V ++++I
Sbjct: 224 NGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMV-DQGVRPDVVTFSALIDTL 282
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
CK G + +AK+ L M+ P+ T+ SLI G+
Sbjct: 283 CKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGF 317
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 160/400 (40%), Gaps = 61/400 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF-GFLAYLYALKGLQEKIV 276
PN+ + L G C D KV E MS LGV P+ F GF+ L KG K V
Sbjct: 183 PNVIVYSCLLRGYCRS-GRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCK-KGRIGKAV 240
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
+++ +M + G +V Y+ LI+ K G++ A L L M+ + + TY
Sbjct: 241 KVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREA-----LALRN-EMDDKGVAPDVVTYN 294
Query: 335 EVVKGF---LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ G L+ GL +I+ L +V SV G+ +G +A S+
Sbjct: 295 TLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGL----CKIGRMRQAISVR 350
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+ M GC L Y + + + H+ A L+ ++ SSGL+ D Y LI
Sbjct: 351 EMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKL 410
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMT-----GLMENH------------------- 487
+ A R M + I Y+ ++ G+ME
Sbjct: 411 WEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYS 470
Query: 488 --------------RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+L+ LDE + V ++ +I+ F K G LE+A+R L+
Sbjct: 471 TMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVT-----YSILINMFAKLGDLEEAERVLK 525
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+M F P+ + SLI GY Q +L + HE++ K
Sbjct: 526 QMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAK 565
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Query: 453 DFQSAFSLFRDM-REARIYDLKG--SYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVK 508
D + A SL DM REA SY +M GL + R + A L + R +V
Sbjct: 92 DLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVV 151
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
T + ++I C A L+ A L M PN Y L+ GY + ++ V ++
Sbjct: 152 T--YGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFE 209
Query: 569 EIKR 572
E+ R
Sbjct: 210 EMSR 213
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 130/308 (42%), Gaps = 19/308 (6%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G+ P S + F + G + +E+ M + +V +++LI+G K G L+ A
Sbjct: 49 GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108
Query: 311 SRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR 368
+ + ME+S F+ TY ++ G G G A L+++ P D
Sbjct: 109 QQVL------DEMERSGFAANLVTYNTLINGLSSAGR-SGEAVLVMQGMTTTP-----DT 156
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNA-CGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
II G D+A+ L+EM GCS Y + CK +A +L+
Sbjct: 157 QTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQ 216
Query: 428 D-ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ I V ++ L++ +QD A L M E +Y TI+ GL
Sbjct: 217 EMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRC 276
Query: 487 HRPELMAAFLDEVV-EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+ A L+++V + +V T + ++ CKAG++ +A R ++RM+ PN
Sbjct: 277 GDVDKGFALLEKMVSRGCKPDVVT--YTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAV 334
Query: 546 TYLSLING 553
TY + +G
Sbjct: 335 TYSLVFDG 342
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 440 NYDALIEASITSQDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENHR-PELMAAFLD 497
Y L+ A + + Q+A L R+M ++ + Y + L ++ + PE M
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAM----- 74
Query: 498 EVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
EVV+ D + +N++I CKAGRL++A++ L M F N TY +LING
Sbjct: 75 EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134
Query: 555 VTA 557
+A
Sbjct: 135 SSA 137
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 93/248 (37%), Gaps = 20/248 (8%)
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE-LESLMNEFGFSSQM 291
GL S + + + M + P+ ++ + + + G ++ LE + G S
Sbjct: 133 GLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF--LQNGNVKGL 349
YS LI+G K NL A + Q ++ C V F L +G K
Sbjct: 193 FTYSILINGLCKSSNLRKADELL----------QEMIGRKDCCASVVAFNTLVDGYCK-- 240
Query: 350 ANLIIEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
A + A++L S G D II G DK ++L++M + GC +
Sbjct: 241 AQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVT 300
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + CK + EA +LV + G + Y + + A L +R
Sbjct: 301 YTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIR 360
Query: 466 E-ARIYDL 472
+ R+ D+
Sbjct: 361 DKGRVTDV 368
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 180/451 (39%), Gaps = 62/451 (13%)
Query: 191 NSNFVAFLKV--FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMS 248
NS FLKV EE ++ DE + NI+ N+ L C +S+A + + M
Sbjct: 423 NSLIRGFLKVESREEASKL-FDEAVACDIANIFTYNSLLSWLCKE-GKMSEATTLWQKML 480
Query: 249 VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLE 308
G+ P + S+ + + +G + + S M + G ++ YS L+ GY K G+ E
Sbjct: 481 DKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTE 540
Query: 309 SASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR 368
A + + N+ SDF TY + G + G +++ +K G V
Sbjct: 541 YAFY-VFDRMVDENIVPSDF---TYNIKINGLCKVGRTSEAQDML---KKFVEKGFVPVC 593
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
I+ + G A + EM G S + Y + +CK + T A ++ +
Sbjct: 594 LTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNE 653
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE------ARIY------------ 470
+ + GL+LD+ Y ALI+ QD ++A LF ++ + + IY
Sbjct: 654 MRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNN 713
Query: 471 ------------------DLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKT 509
DL+ +Y T++ GL++ R L E+ P + + T
Sbjct: 714 MEAALNLQKRMLGEGISCDLQ-TYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYT 772
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+I+ C G+LE+A++ L M PN Y +LI G+ A + +E
Sbjct: 773 ----VLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNE 828
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
+ KG+ D + +KGG
Sbjct: 829 ML-------DKGLTPNDTTYDILINGKIKGG 852
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 5/222 (2%)
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y V++ F +N +V+ L+ + + G V +I ACV G +A + D
Sbjct: 282 YSIVIQAFCKNLDVELACGLL---KDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKD 338
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM +CG + + V +K YCK+ + A + ++ +G + Y LIE +
Sbjct: 339 EMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNG 398
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A+ L+ M+ I +++ G ++ E + DE V + T +
Sbjct: 399 NMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFT--Y 456
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
NS++ CK G++ +A ++M+ P +Y S+I G+
Sbjct: 457 NSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGH 498
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 156/413 (37%), Gaps = 53/413 (12%)
Query: 161 AFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNI 220
A L+K M +++ ++P E ++ C K N V L++ +E + + N+
Sbjct: 298 ACGLLKDM-RDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGV-------QMNV 349
Query: 221 YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
++G C + VS A + + M+ G PN ++ L G K +L +
Sbjct: 350 VVATTLVKGYCKQDKLVS-ALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYT 408
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
M + +SLI G++K+ + E AS+ F + C++ F
Sbjct: 409 QMKNKNICPTVFIVNSLIRGFLKVESREEASKL--------------FDEAVACDIANIF 454
Query: 341 LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
N ++S G +A ++ +M G +
Sbjct: 455 TYNS-----------------------------LLSWLCKEGKMSEATTLWQKMLDKGLA 485
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
Y + +C++ A + D+ GL+ +V Y L++ + D + AF +
Sbjct: 486 PTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYV 545
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFC 520
F M + I +Y + GL + R L + VE V V +NSI+ F
Sbjct: 546 FDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPV-CLTYNSIMDGFI 604
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
K G + A R M PN TY +LING+ L M +E++ K
Sbjct: 605 KEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNK 657
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++A K++ EA + ++ S G++LD Y +I+A + D + A L +DMR+
Sbjct: 251 MRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGW 310
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+G++ +++ ++ DE+V V++ +++ +CK +L A
Sbjct: 311 VPSEGTFTSVIGACVKQGNMVEALRLKDEMVS-CGVQMNVVVATTLVKGYCKQDKLVSAL 369
Query: 530 RTLRRMIFLQFEPNDQTYLSLI 551
+M PN TY LI
Sbjct: 370 EFFDKMNENGPSPNRVTYAVLI 391
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 154/372 (41%), Gaps = 27/372 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ ++G C Q AE V + M G +PN ++ L + Y G +++
Sbjct: 230 IPPDVVTYTTVIDGLCKA-QLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEV 288
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V++ M+ G Y SL++ K G A + G + TY
Sbjct: 289 VQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKV----STYGI 344
Query: 336 VVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ G+ G + +L++E +G+ D + SA G+ DKA I +
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVE------NGLSPDHHIFNIFFSAYAKCGMIDKAMDIFN 398
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M G S + Y + A CK R +A + + G+ ++ +++L+ T
Sbjct: 399 KMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVD 458
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGL------MENHRPELMAAFLDEVVEDPRVE 506
++ A L +M + I + T++ L ME R L +++E V
Sbjct: 459 KWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRR-------LIDLMEHVGVR 511
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+ +I +C GR ++A++ M+ + P + TY +L++GY +A + +
Sbjct: 512 PDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCL 571
Query: 567 WHEIKRKISTDG 578
+ E+ RK T G
Sbjct: 572 FREMLRKGVTPG 583
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 134/319 (42%), Gaps = 14/319 (4%)
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
++S+ ++ M G+ P+ F YA G+ +K +++ + M + G S +V Y
Sbjct: 354 ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYG 413
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
+LI KLG ++ A + G + + +V G + L+ E
Sbjct: 414 ALIDALCKLGRVDDAEVKFNQMINEGVTP----NIVVFNSLVYGLCTVDKWERAEELVYE 469
Query: 356 A--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
Q + P+ + + +I N+G + ++D M G Y P + Y
Sbjct: 470 MLDQGICPNAVFFNT-----LICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGY 524
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C RT EA ++ + S GL Y+ L+ ++ A+ LFR+M +
Sbjct: 525 CLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGV 584
Query: 474 GSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+Y TI+ GL + R E +L+ + + ++ T +N I++ CK+ +++A +
Sbjct: 585 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYT--YNIILNGLCKSNCVDEAFKMF 642
Query: 533 RRMIFLQFEPNDQTYLSLI 551
+ + + N T+ +I
Sbjct: 643 QSLCSKGLQLNIITFTIMI 661
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 32/256 (12%)
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV---MDISSSGLQLDVGNYDALIE 446
+L M GC Y LK C E R EA +L+ D +V +Y +I
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
T ++LF +M + I +Y T++ GL + + +++ D +
Sbjct: 208 GFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMI-DNGFK 266
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI-----NGYVTAEQYF 561
+ +N +IH + G+ ++ + L M +P+ TY SL+ NG ++F
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFF 326
Query: 562 SVLMMWHEIKRKISTDG-----------------------QKGIKFEHNLVDAFLYALVK 598
M+ IK K+ST G + G+ +H++ + F A K
Sbjct: 327 FDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAK 386
Query: 599 GGFFDAVMQVVEKSQE 614
G D M + K ++
Sbjct: 387 CGMIDKAMDIFNKMRQ 402
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 142/364 (39%), Gaps = 55/364 (15%)
Query: 222 ACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-----QEKIV 276
A N L+G C+G + + +++ M LG P+ S+ L LKGL E+ +
Sbjct: 127 AINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTIL-----LKGLCNEKRAEEAL 181
Query: 277 ELESLM-NEFG--FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
EL +M ++ G +V YS +I+G+ G ++ L + G TY
Sbjct: 182 ELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDV----VTY 237
Query: 334 CEVVKGFLQNGNVKGLANLIIEA----QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
V+ G + A L A Q++ +G + +I +++G +
Sbjct: 238 TTVIDGLCK-------AQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQ 290
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+L+EM+A G Y L CK R EA + G++ V Y LI
Sbjct: 291 MLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYA 350
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR--PELMAAFLDEVVEDPRVEV 507
T S M E GL +H +A+ + D +++
Sbjct: 351 TKGALSEMHSFLDLMVE--------------NGLSPDHHIFNIFFSAYAKCGMIDKAMDI 396
Query: 508 ----KTH-------DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+ H ++ ++I A CK GR++DA+ +MI PN + SL+ G T
Sbjct: 397 FNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCT 456
Query: 557 AEQY 560
+++
Sbjct: 457 VDKW 460
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 96/250 (38%), Gaps = 10/250 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN N + C + V + ++I+ M +GVRP+ S+ L Y L G ++ +
Sbjct: 477 PNAVFFNTLICNLC-NVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEK 535
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS-DFSKETYCEV 336
+ M G S V Y++L+ GY ++ A CL + + TY +
Sbjct: 536 VFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA-----YCLFREMLRKGVTPGVVTYNTI 590
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ G Q L + + SG D I++ D+A + + +
Sbjct: 591 LHGLFQTKRFSEAKELYL---NMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCS 647
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + + + + A K R +A L I ++GL +V Y + E I +
Sbjct: 648 KGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEE 707
Query: 457 AFSLFRDMRE 466
SLF M +
Sbjct: 708 FDSLFSAMEK 717
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 130/308 (42%), Gaps = 19/308 (6%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G+ P S + F + G + +E+ M + +V +++LI+G K G L+ A
Sbjct: 49 GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108
Query: 311 SRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR 368
+ + ME+S F+ TY ++ G G G A L+++ P D
Sbjct: 109 QQVL------DEMERSGFAANLVTYNTLINGLSSAGR-SGEAVLVMQGMTTTP-----DT 156
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNA-CGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
II G D+A+ L+EM GCS Y + CK +A +L+
Sbjct: 157 QTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQ 216
Query: 428 D-ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ I V ++ L++ +QD A L M E +Y TI+ GL
Sbjct: 217 EMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRC 276
Query: 487 HRPELMAAFLDEVV-EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+ A L+++V + +V T + ++ CKAG++ +A R ++RM+ PN
Sbjct: 277 GDVDKGFALLEKMVSRGCKPDVVT--YTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAV 334
Query: 546 TYLSLING 553
TY + +G
Sbjct: 335 TYSLVFDG 342
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 440 NYDALIEASITSQDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENHR-PELMAAFLD 497
Y L+ A + + Q+A L R+M ++ + Y + L ++ + PE M
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAM----- 74
Query: 498 EVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
EVV+ D + +N++I CKAGRL++A++ L M F N TY +LING
Sbjct: 75 EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134
Query: 555 VTA 557
+A
Sbjct: 135 SSA 137
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 93/248 (37%), Gaps = 20/248 (8%)
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE-LESLMNEFGFSSQM 291
GL S + + + M + P+ ++ + + + G ++ LE + G S
Sbjct: 133 GLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF--LQNGNVKGL 349
YS LI+G K NL A + Q ++ C V F L +G K
Sbjct: 193 FTYSILINGLCKSSNLRKADELL----------QEMIGRKDCCASVVAFNTLVDGYCK-- 240
Query: 350 ANLIIEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
A + A++L S G D II G DK ++L++M + GC +
Sbjct: 241 AQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVT 300
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + CK + EA +LV + G + Y + + A L +R
Sbjct: 301 YTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIR 360
Query: 466 E-ARIYDL 472
+ RI D+
Sbjct: 361 DKGRITDV 368
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 167/407 (41%), Gaps = 18/407 (4%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+Y N + C Q +S A ++ M LG P+ + L + + V L
Sbjct: 99 NLYTYNIMINCLCRRSQ-LSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M E G+ V +++L+ G + A + + G Q D TY V+
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC--QPDLV--TYGAVIN 213
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
G + G NL+ K+E I D + +I + D A ++ EM+ G
Sbjct: 214 GLCKRGEPDLALNLL---NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ Y + C R ++A++L+ D+ + +V +++LI+A A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 459 SLFRDMREARIYDLKGSYLTIMTGL-MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
LF +M + I +Y +++ G M + E F V +D +V T +N++I+
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT--YNTLIN 388
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTD 577
FCKA ++ D R M N TY +LI+G+ A + M++ K+ +S
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF---KQMVSDG 445
Query: 578 GQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
I + L+D L K G + M V E Q+ K+ D + Y
Sbjct: 446 VHPNIMTYNTLLD----GLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 144/334 (43%), Gaps = 18/334 (5%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
E M +LGV N ++ + + + + M + G+ +V +SL++G+
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCH- 147
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
GN S + ++ M + + +T + +V G Q+ L+ +++
Sbjct: 148 GNRISEAVALV-----DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV---ERMVVK 199
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G D +I+ G D A ++L++M + +Y + + CK +A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
L ++ + G++ DV Y +LI + A L DM E +I ++ +++
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 483 LMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ + DE+++ DP + +NS+I+ FC RL++A++ M+
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVT----YNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
P+ TY +LING+ A++ + ++ ++ R+
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 143/378 (37%), Gaps = 50/378 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY-LYALKGLQEKIV 276
P+I N+ L G C+G +S+A +++ M +G +P+ +F L + L+ E +
Sbjct: 133 PSIVTLNSLLNGFCHG-NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
+E ++ + G +V Y ++I+G K G + A + ME+ + Y
Sbjct: 192 LVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLL------NKMEKGKIEADVVIYS 244
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG--------LSD- 385
V+ + +V NL E ++ GI D +IS N G LSD
Sbjct: 245 TVIDSLCKYRHVDDALNLFTE---MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 386 --------------------------KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
+A + DEM + Y + +C R
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
EA Q+ + S DV Y+ LI ++ LFRDM + +Y T+
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ G + + ++V D V +N+++ CK G+LE A + +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDG-VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 540 FEPNDQTYLSLINGYVTA 557
EP+ TY + G A
Sbjct: 481 MEPDIYTYNIMSEGMCKA 498
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 123/282 (43%), Gaps = 26/282 (9%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKG 339
M+ G + YSSLIS G ASR + +M + + T+ ++
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL------SDMLERKINPNVVTFNSLIDA 319
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA-------CVNLGLSDKAHSILD 392
F + G +IEA+KL ++ RS+ I++ C++ L D+A I
Sbjct: 320 FAKEGK-------LIEAEKLFDE--MIQRSIDPNIVTYNSLINGFCMHDRL-DEAQQIFT 369
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M + C + Y + +CK + + +L D+S GL + Y LI +
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
D +A +F+ M ++ +Y T++ GL +N + E A + E ++ ++E + +
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE-KAMVVFEYLQKSKMEPDIYTY 488
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
N + CKAG++ED + +P+ Y ++I+G+
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 104/491 (21%), Positives = 188/491 (38%), Gaps = 93/491 (18%)
Query: 101 PSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAP 160
PS NSL L+ + + A A V ++E + D T TL+ + N A+
Sbjct: 133 PSIVTLNSL---LNGFCHGNRISEAVALVDQMVEMGYQP-DTVTFTTLVHGLFQHNKASE 188
Query: 161 AFALVKCMFKNRYFMPFELWGGFLVDICRKN------------------SNFVAFLKVFE 202
A ALV+ M +G + +C++ ++ V + V +
Sbjct: 189 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 203 ECCRIA-LDENLDF--------MKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGV 252
C+ +D+ L+ ++P+++ ++ + C YG SDA +++ M +
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG--RWSDASRLLSDMLERKI 306
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLES 309
PN +F L +A +G K++E E L +E +V Y+SLI+G+ L+
Sbjct: 307 NPNVVTFNSLIDAFAKEG---KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 310 ASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A + L M D + TY ++ GF + V L + + G V
Sbjct: 364 AQQIFTL------MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 368 RSV---GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ GF S C D A + +M + G + Y L CK + +A
Sbjct: 418 YTTLIHGFFQASDC------DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 471
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
+ + S ++ D+ Y+ + E + + + LF + LKG
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL------SLKGV--------- 516
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
+P+++A +N++I FCK G E+A +M P+
Sbjct: 517 ---KPDVIA------------------YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555
Query: 545 QTYLSLINGYV 555
TY +LI ++
Sbjct: 556 GTYNTLIRAHL 566
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 141/355 (39%), Gaps = 31/355 (8%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T +L+ + N + A L+ M + R P + L+D K + K+
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLE-RKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF- 259
F+E + ++D PNI N+ + G C + +A+++ M P+ ++
Sbjct: 333 FDEMIQRSID-------PNIVTYNSLINGFCMH-DRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 260 ----GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
GF + G+ EL M+ G V Y++LI G+ + + ++A
Sbjct: 385 TLINGFCKAKKVVDGM-----ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 316 LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFG 373
+ G TY ++ G +NG ++ + ++ K+EP I + G
Sbjct: 440 QMVSDGVHPNI----MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD-IYTYNIMSEG 494
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+ A G + + ++ G + Y + +CK+ EA L + + G
Sbjct: 495 MCKA----GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
D G Y+ LI A + D ++ L ++MR R +Y ++T ++ + R
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGR 604
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 168/428 (39%), Gaps = 42/428 (9%)
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYF-MPFELWGGFLVDICRKNSNFV 195
P ++DF + T ++R T YF EL+G I +F
Sbjct: 69 PSIVDFTRLLTATANLRRYETVI-------------YFSQKMELYG-----ISHDLYSFT 110
Query: 196 AFLKVFEECCRI--ALDENLDFMK----PNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
+ F C R+ AL MK P+I + L G C + + DA ++ M
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCL-VNRIGDAFSLVILMVK 169
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G PN + L G +EL + M + G + +V Y++L++G G
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 310 ASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIV 365
A+R + +M + + + T+ ++ F++ GN+ L E ++P+ +
Sbjct: 230 AARML------RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+ + C++ L D A D M + GC + Y + +CK E +L
Sbjct: 284 YNSIIN----GLCMHGRLYD-AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+S G D+ Y+ LI + A +F M R+ ++ ++ GL
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
N E D++ E + + +N +IH CKA ++E A R+ +P+ +
Sbjct: 399 NGEIESALVKFDDMRESEKY-IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDAR 457
Query: 546 TYLSLING 553
TY +I G
Sbjct: 458 TYTIMILG 465
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 138/336 (41%), Gaps = 27/336 (8%)
Query: 253 RPNESSFGFLAYLYALKGLQ--EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
+P S F L A L+ E ++ M +G S + ++ LI + + L A
Sbjct: 66 QPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFA 125
Query: 311 SRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVV 366
+ G M + + S T+ ++ GF + +L+I K EP+ +V
Sbjct: 126 LSVL------GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+ +I G + A +L+EM G + Y L C R ++A +++
Sbjct: 180 NT-----LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
D+ + DV + ALI+ + + A L+++M ++ + +Y +I+ GL +
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 487 HRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
R D + P V +N++I FCK +++ + +RM F +
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVT----YNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 544 DQTYLSLINGYVTAEQYFSVL--MMWHEIKRKISTD 577
TY +LI+GY + L W + R+++ D
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWM-VSRRVTPD 385
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 158/405 (39%), Gaps = 55/405 (13%)
Query: 65 QDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKR 124
+ +I + + LH L N +A+ + + P+ V N+LI L N L
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI---DGLCKNGELNI 194
Query: 125 AFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFL 184
A ++ +EK D T +TLL + + + A +++ M K R P + L
Sbjct: 195 AL-ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK-RSINPDVVTFTAL 252
Query: 185 VDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVI 244
+D+ K N ++++E + ++D PN N+ + G C + DA+K
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVD-------PNNVTYNSIINGLCMH-GRLYDAKKTF 304
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
+ M+ G PN ++ L + + ++ ++L M+ GF++ + Y++LI GY ++
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
G L A + C D T+C ++ G NG ++
Sbjct: 365 GKLRVALD--IFCWMVSRRVTPDII--THCILLHGLCVNGEIE----------------- 403
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
SA V D+M +G+ Y + CK + +A +
Sbjct: 404 -----------SALVK----------FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWE 442
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
L + G++ D Y +I + + A L R M+E I
Sbjct: 443 LFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
S F+ AF+LF +M ++ + ++T R E + F + +E + +
Sbjct: 49 SIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYF-SQKMELYGISHDLY 107
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ +IH FC+ RL A L +M+ L +EP+ T+ SL++G+
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGF 151
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 162/386 (41%), Gaps = 38/386 (9%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M+P+ Y N + G C G +A V++ M G P+ ++ L + ++
Sbjct: 152 MEPDSYTYNTLIRGLC-GRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQA 210
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++L M G + ++ Y+ +++G + G ++ A L L E + S Y
Sbjct: 211 MKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIE-FLKSLPSHGCEPNTVS---YNI 266
Query: 336 VVKGFLQNGNVKGLANLIIE-AQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDE 393
V+KG + L+ E +QK P +V F +IS GL + A +LD+
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT-----FNMLISFLCRRGLVEPAMEVLDQ 321
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
+ GC+ Y P L A+CK+ + A V + S G D+ +Y+ L+ A +
Sbjct: 322 IPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGE 381
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+A L +++ + SY T++ GL + + + L+E+V ++ ++
Sbjct: 382 VDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTK-GLQPDIITYS 440
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+I C+ R+E+A R ++ + PN Y +++ G KR+
Sbjct: 441 TISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLC---------------KRR 485
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKG 599
+ HN +D F+Y + G
Sbjct: 486 ET----------HNAIDLFIYMISNG 501
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 150/342 (43%), Gaps = 20/342 (5%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ +A +++E+MS G+ P+ ++ G A L + E ++ ++ Y++
Sbjct: 75 LEEALRLVESMS--GLEPS-AAPGPCAALIKKLCASGRTAEARRVL--AACEPDVMAYNA 129
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
+++GY G L++A R + ME + TY +++G G N ++
Sbjct: 130 MVAGYCVTGQLDAARRLV----ADMPMEPDSY---TYNTLIRGLCGRGRT---GNALVVL 179
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+ G V D ++ A +A +LDEM A GC+ + Y + C+E
Sbjct: 180 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQE 239
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R +A + + + S G + + +Y+ +++ T++ ++ A L +M + ++
Sbjct: 240 GRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTF 299
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD--WNSIIHAFCKAGRLEDAKRTLRR 534
+++ L E LD++ P+ + +N I+HAFCK +++ A +
Sbjct: 300 NMLISFLCRRGLVEPAMEVLDQI---PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL 356
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
M+ P+ +Y +L+ + + + + H++K K T
Sbjct: 357 MVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 398
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 119/283 (42%), Gaps = 16/283 (5%)
Query: 209 LDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
+D+ ++F+K PN + N L+G C + DAEK++ MS G PN +F
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTA-ERWEDAEKLMAEMSQKGYPPNVVTFN 300
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L +GL E +E+ + ++G + + Y+ ++ + K ++ A + L +
Sbjct: 301 MLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSR 360
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
G D +Y ++ + G V L+ + + + +++ + +I
Sbjct: 361 GC--YPDIV--SYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT---VIDGLTK 413
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G + +A +L+EM G + Y C+E R EA + + G++ +
Sbjct: 414 AGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVL 473
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
Y+A++ ++ +A LF M + +Y ++ GL
Sbjct: 474 YNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGL 516
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 47/204 (23%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ C RT A ++ D+ G DV Y L+EA+ ++ A L +MR
Sbjct: 163 IRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRA--- 219
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
KG I+T +N +++ C+ GR++DA
Sbjct: 220 ---KGCAPDIIT------------------------------YNVVVNGICQEGRVDDAI 246
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
L+ + EPN +Y ++ G TAE+ W + ++ ++ QKG + N+V
Sbjct: 247 EFLKSLPSHGCEPNTVSYNIVLKGLCTAER-------WEDAEKLMAEMSQKG--YPPNVV 297
Query: 590 --DAFLYALVKGGFFDAVMQVVEK 611
+ + L + G + M+V+++
Sbjct: 298 TFNMLISFLCRRGLVEPAMEVLDQ 321
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 160/364 (43%), Gaps = 16/364 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+++ + + G C G Q V +A +++ M G +PN ++G L G ++ V+
Sbjct: 85 PNVFSYSILIAGLCRG-QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVD 143
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L S M G V Y+ LI G+ K G++ A R L G + + TY ++
Sbjct: 144 LFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP----TVFTYNSLL 199
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
GF + G + +L + + G V + ++ +G +AH + EM +
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLR---QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC + Y ++ C + + EA +L+ ++ SG+ D+ +Y+ LI+ S A
Sbjct: 257 GCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
LF ++ ++ + SY TI+ L + + AAF+ V +D D +I
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK--VGAAFV--VFKDMIANGSAPDAAVVIP 372
Query: 518 ---AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI-KRK 573
C+ RL ++ + M+ + P Y L+ A++ V ++HE+ +R
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432
Query: 574 ISTD 577
S D
Sbjct: 433 FSPD 436
>gi|255661026|gb|ACU25682.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 376
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 140/340 (41%), Gaps = 17/340 (5%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ AE+V + M+ + P+ + + G + L LM G S + ++
Sbjct: 6 IBXAERVYKEMAESKISPDAVVYNAMLNGXFXAGRXKBCFXLWELMXXEG-SXNVASFNX 64
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNG-NVKGLANLI 353
++ G G ++ L M++S F ++ TY +V GF +NG N K L L
Sbjct: 65 MMXGLFXNGEVDZVISIWEL------MKESGFVEDXTTYGILVHGFCKNGYNNKSLHVLE 118
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
I Q G V+D +I+ G DKA S+L+ M GC VY +
Sbjct: 119 IAXQ----XGGVLDAFAYSAMINGXCKXGKXDKAVSVLNGMIXSGCKXNTHVYNALINGL 174
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
+ +A ++ ++ + + Y+ LI + F A+ L ++M E
Sbjct: 175 XXASKFEDAIRVFKELGTXHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWXPSX 234
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+Y ++ GL ++H+ E+ ++V+ +V+ H N + H C G+ Z A
Sbjct: 235 ITYSLLIKGLCQDHKVEMALQLWNQVISKGFXPDVQMH--NILXHGLCSVGKTZXASELY 292
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
M PN T+ +L+ G+ + L++W I R
Sbjct: 293 FDMNXWNCAPNLVTHNTLMEGFYKXGDIRNALVIWXRILR 332
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 170/408 (41%), Gaps = 40/408 (9%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ N L G C +++ E +++ G GFL + V
Sbjct: 173 QPDVVTFNTLLHGLCL-------EDRISEALALFGYMVET---GFL-----------EAV 211
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L M E G + ++ +++LI+G G + A+ + +G G TY +
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG----LHIDVVTYGTI 267
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V G + G+ K NL+ K+E + I D + II G A + EM
Sbjct: 268 VNGMCKMGDTKSALNLL---SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + + Y + +C R ++A +L+ D+ + DV ++ALI AS+
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A L +M I+ +Y +++ G +++R + D ++ P V +N+II
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD-LMASPDVVT----FNTII 439
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+C+A R+++ + LR + N TY +LI+G+ + + ++ E+ IS
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM---IS- 495
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
G+ + + LY + + +++ E Q K+ +D Y
Sbjct: 496 ---HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ YC+ R E QL+ +IS GL + Y+ LI + +A LF++M +
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+ ++ G EN + E A L EV++ ++++ T +N IIH CK ++++A
Sbjct: 499 CPDTITCNILLYGFCENEKLE-EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
+ EP+ QTY +I+G+ +++H++K G + +++
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK-------DNGHEPDNSTY 610
Query: 590 DAFLYALVKGGFFDAVMQVVEK 611
+ + +K G D ++++ +
Sbjct: 611 NTLIRGCLKAGEIDKSIELISE 632
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 169/354 (47%), Gaps = 29/354 (8%)
Query: 209 LDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL 268
+D +D PN+ + + + C +V A + M + G N +F L +
Sbjct: 271 MDNGVD---PNVVSYSCIINSLCVS-GNVELAFALFAQMFLRGCDANIHTFTPLIKGCFM 326
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
+G + ++L LM + G +V Y++LI G G+LE A + M++S
Sbjct: 327 RGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVC------DQMQRSGC 380
Query: 329 --SKETYCEVVKGFLQNGNVKGLA---NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ TY ++ GF ++G++ G + N +I + P+ VV + ++ C N +
Sbjct: 381 LPNVTTYSILIDGFAKSGDLVGASETWNRMI-SHGCRPN--VVTYTCMVDVL--CKN-SM 434
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
D+A+S++++M GC+ + +K C R A +L+ + G ++ Y+
Sbjct: 435 FDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNE 494
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
L++A ++ AF LF+++ EAR +L+ + +T T L R +M L ++
Sbjct: 495 LLDALFRMNKYEEAFGLFQEI-EAR--NLQPNLVTYNTVLYGFSRAGMMGEAL-QLFGKA 550
Query: 504 RVEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFL-QFEPNDQTYLSLING 553
V D +N++IHA+CK G+++ A + + R+ + ++ P+ TY SLI G
Sbjct: 551 LVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWG 604
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 150/383 (39%), Gaps = 42/383 (10%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
+ +++ M + G+ E F + Y G E+ +++ + EFG + Y+ L+
Sbjct: 93 VQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLD 152
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
+ + + NM++ TY ++K +N V L +E
Sbjct: 153 ALLSENKFQMINPLYT------NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVE-- 204
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ G D ++S+ G D A + + VY + CKE
Sbjct: 205 -MSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP-----SVPVYNALIDGMCKEG 258
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM----REARIYD-- 471
R A +L+ ++ +G+ +V +Y +I + S + + AF+LF M +A I+
Sbjct: 259 RIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFT 318
Query: 472 --LKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
+KG ++ R +L A L +++ E +N++IH C G LE+A
Sbjct: 319 PLIKGCFM----------RGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
+ +M PN TY LI+G+ + W+ R IS + + +
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWN---RMISHGCRPNVVTYTCM 425
Query: 589 VDAFLYALVKGGFFDAVMQVVEK 611
VD L K FD +VEK
Sbjct: 426 VD----VLCKNSMFDQANSLVEK 444
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 163/437 (37%), Gaps = 54/437 (12%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PN++ N L+ C V A K+ MS G P+ ++ + G +
Sbjct: 173 DGLIPNVFTYNILLKALCKN-DRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI------------------- 314
EL F + Y++LI G K G +E A + +
Sbjct: 232 DARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCII 286
Query: 315 -LLCLGGGNMEQS------------DFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKL 359
LC+ G N+E + D + T+ ++KG G + +L ++
Sbjct: 287 NSLCVSG-NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGC 345
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
EP+ +V ++ G+ S G ++A + D+M GC + Y + + K
Sbjct: 346 EPN-VVAYNTLIHGLCSN----GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDL 400
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
A++ + S G + +V Y +++ + F A SL M ++ T
Sbjct: 401 VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTF 460
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ GL N R E L E ++ +N ++ A + + E+A + +
Sbjct: 461 IKGLCGNGRVEWAMKLL-ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKG 599
+PN TY +++ G+ A L ++ K + I + + ++A K
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEALQLFG--KALVRGTAPDSITY-----NTMIHAYCKQ 572
Query: 600 GFFDAVMQVVEKSQEMK 616
G Q+VE+ MK
Sbjct: 573 GKVKIAAQLVERVSSMK 589
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 150/378 (39%), Gaps = 42/378 (11%)
Query: 198 LKVFEECCRIALDENLDFMKP-------------NIYACNAALEGCCYGLQSVSDAEKVI 244
LK+F + + E++D + + Y ++G C + DA K++
Sbjct: 198 LKIFNSILDVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCL-TNRIGDAFKLL 256
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
+ M G PN + + + G K+ SLMNE S + F + LIS Y +
Sbjct: 257 QVMKSRGKTPNTVIYNTMIHALCKNG---KVGRARSLMNEMVEPSDVTF-NVLISAYCQE 312
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKE------TYCEVVKGFLQNGNVKGLANLIIEAQK 358
NL A +LL + FS T +VV + G V ++ ++
Sbjct: 313 ENLVQA--LVLL--------EKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVL---ER 359
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+E G VVD +I LG + H +L +M GC + Y YC
Sbjct: 360 VESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGM 419
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR--IYDLKGSY 476
A L D+ + G+ + YD LI + + F + M E+R Y
Sbjct: 420 LDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPY 479
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+I+ GL + ++ E FL ++ ++ + D + I FC G + DAKR +MI
Sbjct: 480 NSIIYGLYKKNQFEEALEFLTKM---EKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMI 536
Query: 537 FLQFEPNDQTYLSLINGY 554
P+ Y+ LI+G+
Sbjct: 537 KEGGVPSVLVYVCLIHGF 554
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 170/429 (39%), Gaps = 67/429 (15%)
Query: 80 LTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL 139
LTN +A+K + + + P+ + N++I +L N + RA + + ++E +
Sbjct: 245 LTNRIGDAFKLLQVMKSRGKTPNTVIYNTMI---HALCKNGKVGRARSLMNEMVEPSD-- 299
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLK 199
T + L+ + A L++ F + F+P + +V I K ++
Sbjct: 300 ---VTFNVLISAYCQEENLVQALVLLEKSF-SMGFVPDVVTATKVVGILCKAGRVTEGVE 355
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
V E E++ + ++ A N ++G C L +V++ M + G PN ++
Sbjct: 356 VLERV------ESMGGV-VDVVAYNTLIKGFCM-LGKAKVGHRVLKDMEIKGCLPNVDTY 407
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
LA Y G+ + ++L + M G + + Y +LI G G +E + + L
Sbjct: 408 NILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILEL--- 464
Query: 320 GGNMEQSDFSK----ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII 375
ME+S Y ++ G + + + + +KL P VDRS+ I+
Sbjct: 465 ---MEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRA--VDRSLR--IL 517
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYV---------------------------- 407
C N G A + D+M G + VYV
Sbjct: 518 GFC-NEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYF 576
Query: 408 ---PT----LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
PT + A+C + + A +L+ D+ G D+G+Y +++A DFQ A L
Sbjct: 577 PTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRL 636
Query: 461 FRDMREARI 469
F M E I
Sbjct: 637 FLQMVEKDI 645
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 144/386 (37%), Gaps = 74/386 (19%)
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
E + E S +G P+ES F + + +++++ L+ +FG + + ++S++
Sbjct: 148 EVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDV 207
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
VK E D ++E Y K + NG V G
Sbjct: 208 LVK--------------------EDIDLAREFY---RKKMMMNG-VSG------------ 231
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
D + G + C+ + D A +L M + G + +Y + A CK +
Sbjct: 232 -----DDYTFGILMKGLCLTNRIGD-AFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVG 285
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD----------MREARIY 470
A L+ ++ DV ++ LI A ++ A L + ++
Sbjct: 286 RARSLMNEMVEPS---DV-TFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVV 341
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+ + G+ R E M +D V +N++I FC G+ + R
Sbjct: 342 GILCKAGRVTEGVEVLERVESMGGVVDVVA-----------YNTLIKGFCMLGKAKVGHR 390
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVD 590
L+ M PN TY L +GY + S + +++++K TD GI + D
Sbjct: 391 VLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMK----TD---GINWNFMTYD 443
Query: 591 AFLYALVKGGFFDAVMQVVEKSQEMK 616
+ L GG + +++E +E +
Sbjct: 444 TLIRGLCSGGRMEDGFKILELMEESR 469
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 108/501 (21%), Positives = 202/501 (40%), Gaps = 37/501 (7%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVH 146
A +F +T L P N+L+ H ++D + ++ P ++ F T
Sbjct: 133 ALSTFGKITKLGLHPDVVTFNTLL-HGLCVEDRVSEALNLFHQMFETTCRPNVVTFTT-- 189
Query: 147 TLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCR 206
L+ + A AL+ M ++ P ++ G +VD K + V+ L + +
Sbjct: 190 -LMNGLCREGRIVEAVALLDRMMEDG-LQPTQITYGTIVDGMCKIGDTVSALDLLRKM-- 245
Query: 207 IALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
E + + PN+ +A ++ C + SDA+ + M G+ P+ ++ + +
Sbjct: 246 ----EEISHIIPNVVIYSAIIDSLCKDGRH-SDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
G +L M E S +V Y++LI+ +VK G A L G + +
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
TY ++ GF + + ++ ++ + P+ I + +I
Sbjct: 361 ----ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT-----LIDGYCGAKRI 411
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D +L EM G Y + + A L+ ++ SSGL D+ D L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGS------------YLTIMTGLMENHRPELM 492
++ + + A +F+ M++++ DL S Y +++GL+ N L
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSK-KDLDASHPFNGVEPDVQTYNILISGLI-NEGKFLE 529
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
A L E + + T ++S+I CK RL++A + M F PN T+ +LIN
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 553 GYVTAEQYFSVLMMWHEIKRK 573
GY A + L ++ E+ R+
Sbjct: 590 GYCKAGRVDDGLELFCEMGRR 610
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 109/523 (20%), Positives = 207/523 (39%), Gaps = 47/523 (8%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
++ + T LH + + EA F + + P+ +L ++ L + A
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTL---MNGLCREGRIVEAV 204
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
A + ++E + T T++ M A L++ M + + +P + ++D
Sbjct: 205 ALLDRMMEDGLQPTQI-TYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIID 263
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIET 246
K+ +F E + E F P+++ N+ + G C SDAE++++
Sbjct: 264 SLCKDGRHSDAQNLFTE-----MQEKGIF--PDLFTYNSMIVGFCSS-GRWSDAEQLLQE 315
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVK 303
M + P+ ++ L + +G K E E L +E G + YSS+I G+ K
Sbjct: 316 MLERKISPDVVTYNALINAFVKEG---KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
L++A L M S T+ ++ G+ + L+ ++
Sbjct: 373 QNRLDAAEHMFYL------MATKGCSPNLITFNTLIDGYCGAKRIDDGMELL---HEMTE 423
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
+G+V D + +I +G + A +L EM + G + L C + +
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Query: 422 ATQL--VM-----DISSS----GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
A ++ VM D+ +S G++ DV Y+ LI I F A L+ +M I
Sbjct: 484 ALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 543
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLED 527
+Y +++ GL + R + D + P V + ++I+ +CKAGR++D
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT----FTTLINGYCKAGRVDD 599
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
M N TY++LI G+ L ++ E+
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 117/295 (39%), Gaps = 23/295 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++G C G + + D +++ M+ G+ + +++ L + + L G ++
Sbjct: 393 PNLITFNTLIDGYC-GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA---------SRTILLCLGGGNMEQSDF 328
L M G +V +L+ G G L+ A S+ L N + D
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLS 384
+TY ++ G + G +EA++L GIV D +I
Sbjct: 512 --QTYNILISGLINEGK-------FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A + D M + S + + + YCK R + +L ++ G+ + Y L
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
I + A +F++M + +Y + ++TGL + A L+++
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 120/305 (39%), Gaps = 51/305 (16%)
Query: 341 LQNG--NVKGLAN---LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
LQ+G +KGL + L + + P VVD G++ V + D S+ +M
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVV---VRMERPDLVISLYQKME 106
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ + +K +C + A I+ GL DV ++ L+
Sbjct: 107 RKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVS 166
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP------------ 503
A +LF M E ++ T+M GL R A LD ++ED
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 504 -----------------RVEVKTH------DWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
++E +H +++II + CK GR DA+ M
Sbjct: 227 DGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTDGQKGIKFEHNLVDAFLYALVKG 599
P+ TY S+I G+ ++ ++ + E ++RKIS D + + L++AF+ +G
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD----VVTYNALINAFVK---EG 339
Query: 600 GFFDA 604
FF+A
Sbjct: 340 KFFEA 344
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 168/376 (44%), Gaps = 21/376 (5%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
+R + F L Y G + VEL M G + +V Y++L++G+ K+G+L +A
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
+ +G ++ + + TY ++ + ++ + L + + ++ +V D
Sbjct: 73 KL----MGEISLVNLEPNVITYTTLIDAYCKS---QCLEDALYMYDEMTVKSLVPDVVTY 125
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
I++ G ++A S+ EM G Y + + KE AEA L +
Sbjct: 126 TCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV 185
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG---LMENHR 488
G+ DV Y AL++ + +A +F+ + E + +Y ++ G L + ++
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNK 245
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
EL+ ++E P V V ++SI+ + K G L +A +R+M+ PN Y
Sbjct: 246 GELLLQEMEEKHIFPNVIV----YSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYG 301
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQV 608
+LI+GY A+Q L ++ E+K +G++ + ++D+F+ L + G + ++
Sbjct: 302 TLIDGYFKADQRGIALDLFKEMK-------SRGLEENNFVIDSFVNNLKRSGRMEEADEL 354
Query: 609 VEKSQEMKVFVDKWKY 624
+ + D+ Y
Sbjct: 355 FKDMMSRGLLPDRVNY 370
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 144/356 (40%), Gaps = 14/356 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA-YLYALKGLQEKIV 276
P++ + G C V +A+ V M +GV PN S+ L L+ + E V
Sbjct: 120 PDVVTYTCIMNGLCKS-GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFV 178
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK-ETYCE 335
L+ M G +V Y++L+ G K G +A + L E+S TY
Sbjct: 179 -LQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLL-----EESLVPNCVTYSA 232
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + G+V L+ Q++E I + V I+ GL ++A ++ +M
Sbjct: 233 LIDGHCKLGDVNKGELLL---QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ VY + Y K + A L ++ S GL+ + D+ + S +
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A LF+DM + + +Y ++M G + + E+ E +N +
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSS-GFDVVAYNVL 408
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
I+ K G+ E ++ M L P+ T+ ++IN Y + L + +E+K
Sbjct: 409 INGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMK 463
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 111/534 (20%), Positives = 206/534 (38%), Gaps = 76/534 (14%)
Query: 69 TSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQD---------N 119
T+L L K+ + NN ++ F+ L SL P+ ++LI L D
Sbjct: 196 TALMDGLFKAGMANNAEDM---FQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252
Query: 120 HNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFEL 179
K F +V+ ++D T LL A +++ M + R +P
Sbjct: 253 MEEKHIFPNVIVY----SSIVDGYTKKGLLNE---------AMDVMRKMVQ-RNILPNVF 298
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD 239
G L+D K L +F+E L+EN +F+ + + N G + +
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEEN-NFVIDS-FVNNLKRSG------RMEE 350
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A+++ + M G+ P+ ++ + + G + + M E +V Y+ LI+
Sbjct: 351 ADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLIN 410
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
G KLG ES S M Q + + T+ ++ + + GN+ L+ E +
Sbjct: 411 GLFKLGKYESESFHT-------GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMK 463
Query: 358 K--LEPSGI----VVDRSVGFGIISACVNL-----------------------GLSDKAH 388
L+P+ I +V R G I ++L S +A
Sbjct: 464 SYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRAD 523
Query: 389 SIL---DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
IL D++ G + L Y + +C+ AT + D+ G+ D+ Y+ALI
Sbjct: 524 VILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALI 583
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
S + AF++ M + +Y ++ GL + A ++++ E V
Sbjct: 584 HGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLV 643
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
T ++ ++ K G +++ + MI F P +TY LI+ + ++
Sbjct: 644 PNAT-TYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKK 696
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/370 (18%), Positives = 144/370 (38%), Gaps = 33/370 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I N + G C + + A+K++ +S++ + PN ++ L Y E +
Sbjct: 50 PDIVTYNTLMNGFC-KIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALY 108
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCE 335
+ M +V Y+ +++G K G +E A ME+ ++ +Y
Sbjct: 109 MYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFR------EMEEVGVVPNRFSYAT 162
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII------SACVNLGLSDKAHS 389
++ + GNV A+ G +V R +GF ++ G+++ A
Sbjct: 163 LIDSLFKEGNV---------AEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAED 213
Query: 390 ----ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+L+E C Y + +CK + L+ ++ + +V Y +++
Sbjct: 214 MFQVLLEESLVPNCVT----YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIV 269
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ A + R M + I Y T++ G + + + E+ + +
Sbjct: 270 DGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM-KSRGL 328
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
E +S ++ ++GR+E+A + M+ P+ Y S+++G+ A +
Sbjct: 329 EENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFN 388
Query: 566 MWHEIKRKIS 575
+ E+ K S
Sbjct: 389 IAQEMTEKSS 398
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 166/415 (40%), Gaps = 71/415 (17%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY-LYALKGLQE--- 273
P++ N + G C + + DA K+++ M + G P+ ++GFL + L + L E
Sbjct: 286 PDVQTFNDVIHGLC-KVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARK 344
Query: 274 ------------------------KIVELESLMNE----FGFSSQMVFYSSLISGYVKLG 305
++ E +S +NE FGF + Y+ L+ G K G
Sbjct: 345 ILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEG 404
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCE---VVKGFLQNGNVKGLANLIIEAQKLEPS 362
+L A + ++ S+ CE + L NG + +A LE +
Sbjct: 405 SLSFARDLV-----------NEMSRRG-CEPNVITYAILVNG--------LCKAGLLEEA 444
Query: 363 GIVVDRSVGFG-----IISACVNLGLSDK-----AHSILDEMNACGCSVGLGVYVPTLKA 412
G+V+ G +I C+ L K A ++L EM GC L Y +
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG 504
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
CK R EA +L ++ G + Y+ LI A + FQ A +L DM
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
K +Y ++ + E ++++ D + T N +I+ CK G++++A L
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDG-LGADTISCNIMINGLCKVGKVDNAFEFL 623
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN 587
R I F P+ TY S++NG + L ++ ++ +G + F +N
Sbjct: 624 RDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFD----RLQVEGVRPDAFTYN 674
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 196/501 (39%), Gaps = 51/501 (10%)
Query: 82 NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL-QDNHNLKRAFASVVYVIEKNPKLL 140
N D A + +T + P+ V +LI LS Q + LK ++V+ P
Sbjct: 232 NEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALK--LLEEMFVMGCMP--- 286
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLV-DICRK---NSNFVA 196
D QT + ++ + N A LV M R F P + GFL+ +CR N
Sbjct: 287 DVQTFNDVIHGLCKVNKIHDATKLVDRMLL-RGFYPDNMTYGFLLHGLCRIGKLNEARKI 345
Query: 197 FLKVFEECCRIA--------------LDENLDFM---------KPNIYACNAALEGCCYG 233
+K+ C A L E F+ +P+I+ N + G C
Sbjct: 346 LIKI--PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKE 403
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
S+S A ++ MS G PN ++ L GL E+ + M+ G + V
Sbjct: 404 -GSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVI 462
Query: 294 YSSLISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL 352
Y+ LI + + A + +C G + D TY ++ G + + L
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGC---KPDLF--TYNSLIYGLCKVDRIDEAFRL 517
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ G V + +I A + G KA +++++M GC++ Y +KA
Sbjct: 518 F---HNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD-MREARIYD 471
+CK + +L + GL D + + +I +AF RD + + D
Sbjct: 575 FCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPD 634
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+ +Y +++ GL + R + D + VE R + T +N+ I CK G + DA
Sbjct: 635 IV-TYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFT--YNTFISWQCKEGMVNDACS 691
Query: 531 TLRRMIFLQFEPNDQTYLSLI 551
R I F P++ T+ L+
Sbjct: 692 FFYRGIENGFVPSNLTWNVLV 712
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV--PTLKAY-- 413
+++ GIV S+ I+ G +A +L +M A VY+ PT K+Y
Sbjct: 137 QMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRA--------VYLCEPTFKSYDL 188
Query: 414 -----CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ AT + D+ S G+ V + +++A + SA SL RDM +
Sbjct: 189 VLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHG 248
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKTHDWNSIIHAFCKAGRLED 527
Y T++ L + ++ L+E+ V +V+T +N +IH CK ++ D
Sbjct: 249 CVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQT--FNDVIHGLCKVNKIHD 306
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLING 553
A + + RM+ F P++ TY L++G
Sbjct: 307 ATKLVDRMLLRGFYPDNMTYGFLLHG 332
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 10/191 (5%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A +L+EM GC + + + CK ++ +AT+LV + G D Y L+
Sbjct: 271 EALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLL 330
Query: 446 EASITSQDFQSAFSLFRDM---REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
A + + A + L Y +M+G ++ + +FL+E + +
Sbjct: 331 HGLCRIGKLNEARKILIKIPCPNNAILNTLINGY--VMSGQLKEAQ-----SFLNETMIN 383
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+ +N ++H CK G L A+ + M EPN TY L+NG A
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEE 443
Query: 563 VLMMWHEIKRK 573
++ HE+ +
Sbjct: 444 AGLVLHEMSAR 454
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 137/339 (40%), Gaps = 13/339 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN + N + G C + V A V + + G+RP SF L G E+
Sbjct: 140 PNFFFFNVLMHGFCK-VGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFR 198
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L+ +M + +S+LI+G K G L+ S G G + T+ ++
Sbjct: 199 LKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNG----VTFTVLI 254
Query: 338 KGFLQNGNVK-GLANL-IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
G + G V L N ++ AQ + P + + +I+ +G +A +++EM+
Sbjct: 255 DGQCKGGKVDLALKNFQMMLAQGVRPDLVTYN-----ALINGLCKVGDLKEARRLVNEMS 309
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A G + + CK A ++ + G++LD + LI
Sbjct: 310 ASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVH 369
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A + RDM A +Y ++ + + L E+ D V +N++
Sbjct: 370 DAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVP-GVVTYNAL 428
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++ CK G++++AK L M+ + PND TY L+ G+
Sbjct: 429 MNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGH 467
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 135/353 (38%), Gaps = 59/353 (16%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQN 343
G +V +++LISG K G +E R G ME + T+ ++ G +
Sbjct: 172 GLRPTVVSFNTLISGCCKAGAVEEGFRL------KGVMESERVCPDVFTFSALINGLCKE 225
Query: 344 GNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
G + + L E + L P+G+ +I G D A M A G
Sbjct: 226 GRLDEGSLLFDEMCGKGLVPNGVTFTV-----LIDGQCKGGKVDLALKNFQMMLAQGVRP 280
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
L Y + CK EA +LV ++S+SGL+ D + LI+ D +SA +
Sbjct: 281 DLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIK 340
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
R M E I LD+V + +I C+
Sbjct: 341 RRMVEEGIE-------------------------LDDVA-----------FTVLISGLCR 364
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKG 581
GR+ DA+R LR M+ F+P+D TY +++ + + M ++ +++ +DG
Sbjct: 365 DGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGN----VXMGFKLLKEMQSDGHVP 420
Query: 582 IKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKK 634
+N A + L K G +++ + V + Y +E H K
Sbjct: 421 GVVTYN---ALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITY-NILLEGHSK 469
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 172/409 (42%), Gaps = 48/409 (11%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
+++EE + L+ P+IY N+ L C + + +A ++ +TM+ G P+ +
Sbjct: 64 RLYEEMVSVGLE-------PSIYTYNSLLNAFCKETK-MKEAMELFKTMAEKGFEPDVVT 115
Query: 259 FG-FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
+ ++ L + E + L M E G S+ V Y++LI+G K N+E A + +
Sbjct: 116 YSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM 175
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNV----------------------KGLANLIIE 355
G + + TY ++ G + G V GL + + +
Sbjct: 176 ASKGYVPDN----ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYK 231
Query: 356 AQKLEPSGIVVDRSVGFGIISACVN-----LGLS-----DKAHSILDEMNACGCSVGLGV 405
K + + + + G + V LGL+ D+A + +M A GC+
Sbjct: 232 EGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGAT 291
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y L +C+ + +A +++ ++S G DV Y+ L++ + A LF M
Sbjct: 292 YSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV 351
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-EVKTHDWNSIIHAFCKAGR 524
+ SY ++ GL + ++ D ++E V +V T +N ++ CKAG+
Sbjct: 352 DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVT--FNILMDGLCKAGK 409
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
L++AK L +M P+ Y +L+NG ++ + +K K
Sbjct: 410 LDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 458
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 148/345 (42%), Gaps = 14/345 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V +A ++ E M +G+ P+ ++ L + + ++ +EL M E GF +V YS+
Sbjct: 59 VDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYST 118
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLII 354
+ISG K G + A + M + S T Y ++ G ++ N++ L+
Sbjct: 119 IISGLCKTGKVTEALEMLF-----HKMIERGCSANTVAYNALINGLCKDENIERAYKLL- 172
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
+++ G V D I+S +G +A D M + G S + Y L A
Sbjct: 173 --EEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALY 230
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
KE +T EA +L D+ + G D Y++++ + A +F+ M +
Sbjct: 231 KEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGA 290
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRV-EVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y +++G + + L+E+ + V +V T +N ++ CK ++ A
Sbjct: 291 TYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVT--YNILLDGLCKTNLVDKAHELFS 348
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTD 577
M+ P+ +Y ++NG + +++ I+RK+ D
Sbjct: 349 TMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPD 393
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 7/232 (3%)
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNL 381
M + ++ T+ V+K F + G ++ L +++ +GI D + + I I
Sbjct: 1 MRECSPNRYTFRVVLKSFCKQGKLRDGYKLF---EQMLDNGISPD-GIEYNILIDGYAKK 56
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G D+A+ + +EM + G + Y L A+CKE + EA +L ++ G + DV Y
Sbjct: 57 GRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTY 116
Query: 442 DALIEASITSQDFQSAFS-LFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
+I + A LF M E +Y ++ GL ++ E L+E+
Sbjct: 117 STIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMA 176
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
V +N+I+ C+ G++ +AK+ M + P+ Y L++
Sbjct: 177 SKGYVP-DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLD 227
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ Y K+ R EA +L ++ S GL+ + Y++L+ A + A LF+ M E
Sbjct: 50 IDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGF 109
Query: 470 YDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
+Y TI++GL + + E + +++E T +N++I+ CK +E A
Sbjct: 110 EPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERG-CSANTVAYNALINGLCKDENIERA 168
Query: 529 KRTLRRMIFLQFEPNDQTYLSLING 553
+ L M + P++ TY ++++G
Sbjct: 169 YKLLEEMASKGYVPDNITYNTILSG 193
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 127/359 (35%), Gaps = 63/359 (17%)
Query: 83 NTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDF 142
N + A+K + + + P N++++ L + K+ F S + D
Sbjct: 164 NIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDS----MPSRGYSPDV 219
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVA---FLK 199
+ LL ++ A L K + Y + L+ + RK++ A F K
Sbjct: 220 VAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 279
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
+ C PN + L G C + V DA KV+E MS +G P+ ++
Sbjct: 280 MVASGC-----------APNGATYSIVLSGHCRA-KKVDDAHKVLEEMSKIGAVPDVVTY 327
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
L L +K EL S M + G + +V YS +++G K + A
Sbjct: 328 NILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA--------- 378
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII-SAC 378
+ L + +IE +KL P V F I+
Sbjct: 379 ---------------------------RVLFDRMIE-RKLVPD------VVTFNILMDGL 404
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
G D+A +LD+M GC+ Y + K+ R +A +L + G D
Sbjct: 405 CKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463
>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 376
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 143/340 (42%), Gaps = 17/340 (5%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ A++V M+ V P+ + + + G + +L LM G S +V ++
Sbjct: 6 IDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKG-SQNVVSFNI 64
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNV-KGLANLI 353
++ G G ++ A L M++S F ++ TY ++ GF +NG + K L L
Sbjct: 65 MMRGLFDNGEVDKAISIWEL------MKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLE 118
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
I E G V+D +I+ DKA S+L+ M GC VY + +
Sbjct: 119 IA----EGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGF 174
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
+ +A ++ ++ S + Y LI + F A+ L ++M E
Sbjct: 175 VGASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCV 234
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+Y +M GL + H+ E+ ++V+ + +V+ H N +IH C G+ + A
Sbjct: 235 ITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMH--NILIHGLCSVGKTQHALMLY 292
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
M PN T+ +L+ G+ + L++W I R
Sbjct: 293 FDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILR 332
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 5/228 (2%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D A + EM S VY L + + R + L + G Q +V +++ +
Sbjct: 7 DGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKGSQ-NVVSFNIM 65
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
+ + + A S++ M+++ + +Y I+ G +N L E+ E
Sbjct: 66 MRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVL-EIAEGKG 124
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+ ++++I+ CK +L+ A L MI +PN Y +LING+V A ++ +
Sbjct: 125 GVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAI 184
Query: 565 MMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
++ E+ S D I H L++ +D V +++EK
Sbjct: 185 RVFREMG---SMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKG 229
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 157/376 (41%), Gaps = 51/376 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY-LYALKGLQEKIV 276
P+I N+ L G C+G +S+A +++ M +G +P+ +F L + L+ E +
Sbjct: 143 PSIVTLNSLLNGFCHG-NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
+E ++ + G +V Y ++I+G K G + A + ME+ + Y
Sbjct: 202 LVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLL------NKMEKGKIEADVVIYN 254
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG--------LSD- 385
++ G + ++ +L K+E GI D +IS N G LSD
Sbjct: 255 TIIDGLCKYKHMDDAFDLF---NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 386 --------------------------KAHSILDEM-NACGCSVGLGVYVPTLKAYCKEHR 418
+A + DEM + C + Y +K +CK R
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
E ++ ++S GL + Y LI ++D +A +F+ M ++ +Y
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ GL N E A + E ++ +++ + ++I A CKAG++ED +
Sbjct: 432 LLDGLCNNGNVE-TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 539 QFEPNDQTYLSLINGY 554
+PN TY ++++G+
Sbjct: 491 GVKPNVVTYTTMMSGF 506
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 141/338 (41%), Gaps = 9/338 (2%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+S A ++ M LG P+ + L + + V L M E G+ V +++
Sbjct: 126 LSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 185
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
L+ G + A + + G Q D TY V+ G + G NL+
Sbjct: 186 LVHGLFQHNKASEAVALVERMVVKGC--QPDLV--TYGAVINGLCKRGEPDLALNLL--- 238
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
K+E I D + II D A + ++M G + Y P + C
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR-IYDLKGS 475
R ++A++L+ D+ + D+ ++ALI+A + A L+ +M +++ + +
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
Y T++ G + R E E+ + V T + ++IH F +A ++A+ ++M
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ P+ TY L++G + L+++ ++++
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 167/433 (38%), Gaps = 52/433 (12%)
Query: 101 PSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAP 160
PS NSL L+ + + A A V ++E + D T TL+ + N A+
Sbjct: 143 PSIVTLNSL---LNGFCHGNRISEAVALVDQMVEMGYQP-DTVTFTTLVHGLFQHNKASE 198
Query: 161 AFALVKCMFKNRYFMPFELWGGFLVDICRKN------------------SNFVAFLKVFE 202
A ALV+ M +G + +C++ ++ V + + +
Sbjct: 199 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 203 ECCRIA-LDENLDF--------MKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGV 252
C+ +D+ D +KP+++ N + C YG SDA +++ M +
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG--RWSDASRLLSDMLEKNI 316
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ----MVFYSSLISGYVKLGNLE 308
P+ F L + +G K+VE E L +E S +V Y++LI G+ K +E
Sbjct: 317 NPDLVFFNALIDAFVKEG---KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 309 SASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
M Q + TY ++ GF Q + N + +++ G+
Sbjct: 374 EGMEVFR------EMSQRGLVGNTVTYTTLIHGFFQ---ARDCDNAQMVFKQMVSDGVHP 424
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D ++ N G + A + + M + + Y ++A CK + + L
Sbjct: 425 DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+S G++ +V Y ++ + A +LF +M+E G+Y T++ + +
Sbjct: 485 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544
Query: 487 HRPELMAAFLDEV 499
A + E+
Sbjct: 545 GDEAASAELIKEM 557
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 160/364 (43%), Gaps = 16/364 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+++ + + G C G Q V +A +++ M G +PN ++G L G ++ V+
Sbjct: 85 PNVFSYSILIAGLCRG-QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVD 143
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L S M G V Y+ LI G+ K G++ A R L G + + TY ++
Sbjct: 144 LFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP----TVFTYNSLL 199
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
GF + G + +L + + G V + ++ +G +AH + EM +
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLR---QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC + Y ++ C + + EA +L+ ++ SG+ D+ +Y+ LI+ S A
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
LF ++ ++ + SY TI+ L + + AAF+ V +D D +I
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK--VGAAFV--VFKDMIANGSAPDAAVVIP 372
Query: 518 ---AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI-KRK 573
C+ RL ++ + M+ + P Y L+ A++ V ++HE+ +R
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432
Query: 574 ISTD 577
S D
Sbjct: 433 FSPD 436
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 151/356 (42%), Gaps = 8/356 (2%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N+ + C ++V +AE ++ M GV PN+ ++ + + Y+ G E+ +
Sbjct: 149 PDVVTHNSIINALCKA-RAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATK 207
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M G +V ++S + K G + A+ G+ + TY ++
Sbjct: 208 MFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRP----NIVTYGILL 263
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G+ G A+++ ++ GIV + V +I A G+ D+A IL EM
Sbjct: 264 HGYATEGC---FADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQ 320
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G S + Y + A C+ R A+A + +G+Q + Y +LI+ T D A
Sbjct: 321 GLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKA 380
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
L +M I ++ + + + A + ++V+D +N++I
Sbjct: 381 KELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLID 440
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+C G + A L MI P+ TY +L+NGY + + L ++ E+ K
Sbjct: 441 GYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDK 496
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 138/345 (40%), Gaps = 12/345 (3%)
Query: 217 KPNIYACNAALEGCCYGLQSV-SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+PNI L G Y + +D TM G+ N F L YA +G+ ++
Sbjct: 253 RPNIVTYGILLHG--YATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEA 310
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ + S M G S + YS+LIS ++G L A +G G + Y
Sbjct: 311 MLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNT----VVYHS 366
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF-GIISACVNLGLSDKAHSILDEM 394
+++GF +G++ L+ E +GI F I+ + G AH I D +
Sbjct: 367 LIQGFCTHGDLVKAKELVYEMMN---NGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLV 423
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + ++ + YC +A ++ + S+G+ D Y+ L+ S
Sbjct: 424 KDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRI 483
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
+LFR+M + +I +Y I+ GL R L E++ V +N
Sbjct: 484 DDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMI-GCGTTVSLPTYNI 542
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
I+ C+ ++A +++ + + N T ++IN T ++
Sbjct: 543 ILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQR 587
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 123/277 (44%), Gaps = 11/277 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN ++ ++G C V E V E M+ RPN + F + + +G
Sbjct: 357 VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDA 416
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L+ + G S ++ +++LI GY +G + A ++L + + F TY
Sbjct: 417 HHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAF-SVLDAMISAGIGPDTF---TYNT 472
Query: 336 VVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+V G+ ++G + NL E +K++P+ + + I+ G + A +L E
Sbjct: 473 LVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNI-----ILDGLFRAGRTVAAQKMLHE 527
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M CG +V L Y LK C+ + T EA + + + ++ ++ + +I + T Q
Sbjct: 528 MIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQR 587
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
+ A LF + ++ + +Y ++ L++ E
Sbjct: 588 REEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVE 624
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 358 KLEPSGIVVDRSVGFGIISA-CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+L +G+ D++ ++ C D +L M GC Y LK C +
Sbjct: 33 RLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDD 92
Query: 417 HRTAEATQLV-MDISSSGL-QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+R+ +A L+ M G+ DV Y+ +I A +L+ +M
Sbjct: 93 NRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEM---------- 142
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+ F+ +VV TH NSII+A CKA +++A+ LR+
Sbjct: 143 ----------------MQQGFVPDVV--------TH--NSIINALCKARAVDNAELLLRQ 176
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
M+ PN TY S+I+GY T ++ M+ E+
Sbjct: 177 MVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREM 212
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 122/265 (46%), Gaps = 11/265 (4%)
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
SR +G +++S F TY ++ + G+++ +L + ++ +G D
Sbjct: 239 SRKFFKDMGAAGIKRSVF---TYNIMIDYLCKEGDLEMARSLFTQ---MKEAGFTPDIVT 292
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
+I LGL D+ I ++M C + Y + +CK R +A + + ++
Sbjct: 293 YNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMK 352
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
++GL+ +V Y I+A Q A F DMR + + +Y +++ N +
Sbjct: 353 ANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA---NCKAG 409
Query: 491 LMAAFLDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
+A L V E + +K + + +++ C+ GR+++A+ R M+ PN +TY
Sbjct: 410 NLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYT 469
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRK 573
+L++G++ A++ + E+K K
Sbjct: 470 ALVHGFIKAKEMEYAKDILKEMKEK 494
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 152/360 (42%), Gaps = 23/360 (6%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAE---KVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
P +CNA L + L V + K + M G++ + ++ + +G E
Sbjct: 218 PKPRSCNALL----HRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEM 273
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--T 332
L + M E GF+ +V Y+SLI G+ KLG L+ +C+ M+ +D + T
Sbjct: 274 ARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDEC-----ICI-FEQMKDADCDPDVIT 327
Query: 333 YCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
Y ++ F + + + E A L+P+ VV S I A G+ +A
Sbjct: 328 YNALINCFCKFERMPKAFEFLHEMKANGLKPN--VVTYST---FIDAFCKEGMLQEAIKF 382
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+M + Y + A CK AEA +LV +I +G++L+V Y AL++
Sbjct: 383 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 442
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ A +FR M A + + +Y ++ G ++ E L E+ E ++
Sbjct: 443 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC-IKPDLL 501
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+ +I+ C RLE+AK + + N Y +L++ Y + Q L + E+
Sbjct: 502 LYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 561
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 109/524 (20%), Positives = 214/524 (40%), Gaps = 36/524 (6%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFAS------ 128
LH+ D + K FK + A + S N +I +L D + F
Sbjct: 227 LHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGF 286
Query: 129 ----VVY--VIEKNPKLLDFQTVHTLLGSMRNANTAAPAF---ALVKCMFK-NRYFMPFE 178
V Y +I+ + KL + M++A+ AL+ C K R FE
Sbjct: 287 TPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFE 346
Query: 179 LWGGFLVDICRKN----SNFV-AFLK--VFEECCRIALDENLDFMKPNIYACNAALEGCC 231
+ + N S F+ AF K + +E + +D + PN + + ++ C
Sbjct: 347 FLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANC 406
Query: 232 YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQM 291
++++A K++E + G++ N ++ L +G ++ E+ M G +
Sbjct: 407 KA-GNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQ 465
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGL 349
Y++L+ G++K +E A + M++ + Y ++ G ++
Sbjct: 466 ETYTALVHGFIKAKEMEYAKDIL------KEMKEKCIKPDLLLYGTILWGLCNESRLEEA 519
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
LI E ++ SGI + + ++ A G + +A ++L+EM G Y
Sbjct: 520 KLLIGE---IKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCAL 576
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ CK EA +S GLQ +V Y AL++ + F+ A LF +M + +
Sbjct: 577 IDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGM 636
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
K +Y ++ G M++ + D ++E +E+ H + ++I +G+++ A+
Sbjct: 637 MPDKIAYTALIDGNMKHGNLQEALNLRDRMIE-IGMELDLHAYTALIWGLSHSGQVQKAR 695
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
L MI P++ Y+ LI Y + L + +E+ ++
Sbjct: 696 NLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKR 739
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
++A ++E M LG+ E ++ L GL ++ + M+E G + Y++L
Sbjct: 552 TEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTAL 611
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
+ G K E A + L G M K Y ++ G +++GN++ NL
Sbjct: 612 VDGLCKNNCFEVAKKLFDEMLDKGMMPD----KIAYTALIDGNMKHGNLQEALNL---RD 664
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
++ G+ +D +I + G KA ++LDEM G VY+ +K Y
Sbjct: 665 RMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALG 724
Query: 418 RTAEATQLVMDISSSGL 434
+ EA +L +++ G+
Sbjct: 725 KVDEALELQNEMAKRGM 741
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
G +DAL A I + A F MR+ R++ S ++ L + R +L F +
Sbjct: 186 GVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKD 245
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ ++ +N +I CK G LE A+ +M F P+ TY SLI+G+
Sbjct: 246 -MGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 300
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 18/209 (8%)
Query: 209 LDENLDF--MKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
L+E LD + + C A ++G C GL V +A MS +G++PN + + L
Sbjct: 558 LEEMLDLGLIATEVTYC-ALIDGLCKSGL--VQEAMHHFGRMSEIGLQPNVAVYTALVDG 614
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS--RTILLCLGGGNM 323
E +L M + G + Y++LI G +K GNL+ A R ++ +G
Sbjct: 615 LCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG---- 670
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ Y ++ G +G V+ NL+ E + G++ D V +I LG
Sbjct: 671 --MELDLHAYTALIWGLSHSGQVQKARNLLDE---MIGKGVLPDEVVYMCLIKKYYALGK 725
Query: 384 SDKAHSILDEMNACGCSVGLGVY-VPTLK 411
D+A + +EM G GL + VP+++
Sbjct: 726 VDEALELQNEMAKRGMITGLSDHAVPSVQ 754
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 115/534 (21%), Positives = 208/534 (38%), Gaps = 38/534 (7%)
Query: 28 PSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNITSLETNLHKSLL-----TN 82
P Y++ I KR SL Q+ ++ + + D +T + +LL ++
Sbjct: 277 PDAYTY-NTLITCCKRGSLHQEAAQV-FEEMKAAGFSHDKVT------YNALLDVYGKSH 328
Query: 83 NTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDF 142
EA K + N PS NSLI S+ + L A + EK K D
Sbjct: 329 RPKEAMKVLNEMELNGFSPSIVTYNSLI---SAYARDGMLDEAMELKNQMAEKGTKP-DV 384
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE 202
T TLL A A + + M +N P + + FV +K+F+
Sbjct: 385 FTYTTLLSGFERAGKVESAMNIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFD 443
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSV-SDAEKVIETMSVLGVRPNESSFGF 261
E N+ + P+I N L +G + S+ V + M G P +F
Sbjct: 444 EI-------NVCGLSPDIVTWNTLL--AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L Y+ G E+ + + M + G + + Y+++++ + G + S +L + G
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR-GGMWEQSEKVLAEMEDG 553
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF-GIISACVN 380
+ ++ TYC ++ + NG GL + + E SG++ R+V ++ C
Sbjct: 554 RCKPNEL---TYCSLLHAY-ANGKEIGLMHSLAEEVY---SGVIEPRAVLLKTLVLVCSK 606
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
L +A E+ G S + + Y + +A +++ + G +
Sbjct: 607 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMAT 666
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y++L+ S DF + + R++ I SY T++ N R + E+
Sbjct: 667 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM- 725
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
D + +N+ I ++ E+A +R MI PN TY S+++GY
Sbjct: 726 RDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 140/351 (39%), Gaps = 54/351 (15%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + P+ Y N + CC +A +V E M G ++ ++ L +Y G
Sbjct: 273 DGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVY---GKSH 328
Query: 274 KIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
+ E ++NE GFS +V Y+SLIS Y + G L+ A M +
Sbjct: 329 RPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMEL------KNQMAEKGTKP 382
Query: 331 E--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
+ TY ++ GF + G V+ N+ +++ +G + I N G
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMNIF---EEMRNAGCKPNICTFNAFIKMYGNRGKFVDMM 439
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
I DE+N CG S + + L + + +E + + ++ +G + ++ LI A
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
F+ A +++R M +A + P+L
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGV------------------TPDLST--------------- 526
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+N+++ A + G E +++ L M + +PN+ TY SL++ Y ++
Sbjct: 527 ---YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 140/368 (38%), Gaps = 21/368 (5%)
Query: 262 LAYLYALKGLQEKIVELESLMN---EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+A + ++ G + ++ +L N E GFS + Y+SLIS + G A
Sbjct: 176 IAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF---- 231
Query: 319 GGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
ME+ TY ++ F + G ++E K++ GI D +I+
Sbjct: 232 --KKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVE--KMKSDGIAPDAYTYNTLIT 287
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
C L +A + +EM A G S Y L Y K HR EA +++ ++ +G
Sbjct: 288 CCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSP 347
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
+ Y++LI A A L M E +Y T+++G + E
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIF 407
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+E + + + +N+ I + G+ D + + P+ T+ +L+ +
Sbjct: 408 EE-MRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 557 AEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMK 616
V ++ E+KR G E + + A + G F+ M V + +
Sbjct: 467 NGMDSEVSGVFKEMKR-------AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 617 VFVDKWKY 624
V D Y
Sbjct: 520 VTPDLSTY 527
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 81/199 (40%), Gaps = 7/199 (3%)
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
C + +AE+ + G P+ ++ + +Y + + K E+ M E GF+
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPS 663
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
M Y+SL+ + + + + + L G + D +Y V+ + +N ++ +
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKG--IKPDII--SYNTVIYAYCRNTRMRDAS 719
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
+ E + SGIV D I + + ++A ++ M GC Y +
Sbjct: 720 RIFSE---MRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Query: 411 KAYCKEHRTAEATQLVMDI 429
YCK +R EA V D+
Sbjct: 777 DGYCKLNRKDEAKLFVEDL 795
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
K+ IL E+ A G + Y + AYC+ R +A+++ ++ SG+ DV Y+ I
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFI 741
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
+ F+ A + R M + + +Y +I+ G + +R + F++++
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 14/279 (5%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M E G +V +++L++G + G + A + + G+ ++ TY +V G
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQP----NEVTYGTIVNGMC 56
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
+ G+ NL+ +K++ S I D + II G KA ++ EM+ G
Sbjct: 57 KMGDTDSALNLL---RKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFP 113
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ Y + C + +A QL+ D+ S + DV ++ALI A + A L+
Sbjct: 114 NVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELY 173
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHA 518
R+M I+ +Y +++ G ++ R + D +V P V N++I
Sbjct: 174 REMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITI----NTLIGG 229
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
C+A R++D + L M+ P+ +Y +LI+G+ A
Sbjct: 230 CCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQA 268
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 121/320 (37%), Gaps = 48/320 (15%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ A N + G C V +AE +++ M G +PNE
Sbjct: 9 DVVAFNTLMNGLCRE-GRVLEAEALVDRMVENGHQPNE---------------------- 45
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEV 336
V Y ++++G K+G+ +SA + M++S + Y +
Sbjct: 46 -------------VTYGTIVNGMCKMGDTDSALNLLR------KMDESHIKADVVIYTAI 86
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ ++G+ NL E + GI + +I C + G A +L +M
Sbjct: 87 IDRLCKDGHHSKAQNLFTE---MHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIE 143
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
+ + + A+ KE + +EA +L ++ + D Y++LI+
Sbjct: 144 SNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDD 203
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A +F M + T++ G R + L E++ V + +N++I
Sbjct: 204 AKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVP-DSVSYNTLI 262
Query: 517 HAFCKAGRLEDAKRTLRRMI 536
H FC+AG L A+ + MI
Sbjct: 263 HGFCQAGDLNAAQDLFQEMI 282
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 218 PNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
PN+ N ++GCC YG +DAE+++ M V P+ +F L + +G KI
Sbjct: 113 PNVLTYNCMIDGCCSYG--KWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEG---KIS 167
Query: 277 ELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
E E L E + Y+SLI G+ K L+ A L + G
Sbjct: 168 EAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKG 215
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 166/415 (40%), Gaps = 71/415 (17%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY-LYALKGLQE--- 273
P++ N + G C + + DA K+++ M + G P+ ++GFL + L + L E
Sbjct: 286 PDVQTFNDVIHGLC-KVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARK 344
Query: 274 ------------------------KIVELESLMNE----FGFSSQMVFYSSLISGYVKLG 305
++ E +S +NE FGF + Y+ L+ G K G
Sbjct: 345 ILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEG 404
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCE---VVKGFLQNGNVKGLANLIIEAQKLEPS 362
+L A + ++ S+ CE + L NG + +A LE +
Sbjct: 405 SLSFARDLV-----------NEMSRRG-CEPNVITYAILVNG--------LCKAGLLEEA 444
Query: 363 GIVVDRSVGFG-----IISACVNLGLSDK-----AHSILDEMNACGCSVGLGVYVPTLKA 412
G+V+ G +I C+ L K A ++L EM GC L Y +
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG 504
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
CK R EA +L ++ G + Y+ LI A + FQ A +L DM
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
K +Y ++ + E ++++ D + T N +I+ CK G++++A L
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDG-LGADTISCNIMINGLCKVGKVDNAFEFL 623
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN 587
R I F P+ TY S++NG + L ++ ++ +G + F +N
Sbjct: 624 RDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFD----RLQVEGVRPDAFTYN 674
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 196/501 (39%), Gaps = 51/501 (10%)
Query: 82 NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL-QDNHNLKRAFASVVYVIEKNPKLL 140
N D A + +T + P+ V +LI LS Q + LK ++V+ P
Sbjct: 232 NEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALK--LLEEMFVMGCMP--- 286
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD-ICRK---NSNFVA 196
D QT + ++ + N A LV M R F P + GFL+ +CR N
Sbjct: 287 DVQTFNDVIHGLCKVNKIHDATKLVDRMLL-RGFYPDNMTYGFLLHGLCRIGKLNEARKI 345
Query: 197 FLKVFEECCRIA--------------LDENLDFM---------KPNIYACNAALEGCCYG 233
+K+ C A L E F+ +P+I+ N + G C
Sbjct: 346 LIKI--PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKE 403
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
S+S A ++ MS G PN ++ L GL E+ + M+ G + V
Sbjct: 404 -GSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVI 462
Query: 294 YSSLISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL 352
Y+ LI + + A + +C G + D TY ++ G + + L
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGC---KPDLF--TYNSLIYGLCKVDRIDEAFRL 517
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ G V + +I A + G KA +++++M GC++ Y +KA
Sbjct: 518 F---HNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD-MREARIYD 471
+CK + +L + GL D + + +I +AF RD + + D
Sbjct: 575 FCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPD 634
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+ +Y +++ GL + R + D + VE R + T +N+ I CK G + DA
Sbjct: 635 IV-TYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFT--YNTFISWQCKEGMVNDACL 691
Query: 531 TLRRMIFLQFEPNDQTYLSLI 551
R I F P++ T+ L+
Sbjct: 692 FFYRGIENGFVPSNLTWNVLV 712
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV--PTLKAY-- 413
+++ GIV S+ I+ G +A +L +M A VY+ PT K+Y
Sbjct: 137 QMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRA--------VYLCEPTFKSYDL 188
Query: 414 -----CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ AT + D+ S G+ V + +++A + SA SL RDM +
Sbjct: 189 VLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHG 248
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKTHDWNSIIHAFCKAGRLED 527
Y T++ L + ++ L+E+ V +V+T +N +IH CK ++ D
Sbjct: 249 CVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQT--FNDVIHGLCKVNKIHD 306
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLING 553
A + + RM+ F P++ TY L++G
Sbjct: 307 ATKLVDRMLLRGFYPDNMTYGFLLHG 332
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 10/191 (5%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A +L+EM GC + + + CK ++ +AT+LV + G D Y L+
Sbjct: 271 EALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLL 330
Query: 446 EASITSQDFQSAFSLFRDM---REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
A + + A + L Y +M+G ++ + +FL+E + +
Sbjct: 331 HGLCRIGKLNEARKILIKIPCPNNAILNTLINGY--VMSGQLKEAQ-----SFLNETMIN 383
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+ +N ++H CK G L A+ + M EPN TY L+NG A
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEE 443
Query: 563 VLMMWHEIKRK 573
++ HE+ +
Sbjct: 444 AGLVLHEMSAR 454
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 168/376 (44%), Gaps = 21/376 (5%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
+R + F L Y G + VEL M G + +V Y++L++G+ K+G+L +A
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
+ +G ++ + + TY ++ + ++ + L + + ++ +V D
Sbjct: 73 K----LMGEISLVNLEPNVITYTTLIDAYCKS---QCLEDALYMYDEMTVKSLVPDVVTY 125
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
I++ G ++A S+ EM G Y + + KE AEA L +
Sbjct: 126 TCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV 185
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG---LMENHR 488
G+ DV Y AL++ + +A +F+ + E + +Y ++ G L + ++
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNK 245
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
EL+ ++E P V V ++SI+ + K G L +A +R+M+ PN Y
Sbjct: 246 GELLLQEMEEKHIFPNVIV----YSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYG 301
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQV 608
+LI+GY A+Q L ++ E+K +G++ + ++D+F+ L + G + ++
Sbjct: 302 TLIDGYFKADQRGIALDLFKEMK-------SRGLEENNFVIDSFVNNLKRSGRMEEADEL 354
Query: 609 VEKSQEMKVFVDKWKY 624
+ + D+ Y
Sbjct: 355 FKDMMSRGLLPDRVNY 370
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 144/356 (40%), Gaps = 14/356 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA-YLYALKGLQEKIV 276
P++ + G C V +A+ V M +GV PN S+ L L+ + E V
Sbjct: 120 PDVVTYTCIMNGLCKS-GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFV 178
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK-ETYCE 335
L+ M G +V Y++L+ G K G +A + L E+S TY
Sbjct: 179 -LQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLL-----EESLVPNCVTYSA 232
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + G+V L+ Q++E I + V I+ GL ++A ++ +M
Sbjct: 233 LIDGHCKLGDVNKGELLL---QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ VY + Y K + A L ++ S GL+ + D+ + S +
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A LF+DM + + +Y ++M G + + E+ E +N +
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSS-GFDVVAYNVL 408
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
I+ K G+ E ++ M L P+ T+ ++IN Y + L + +E+K
Sbjct: 409 INGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMK 463
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 111/534 (20%), Positives = 206/534 (38%), Gaps = 76/534 (14%)
Query: 69 TSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQD---------N 119
T+L L K+ + NN ++ F+ L SL P+ ++LI L D
Sbjct: 196 TALMDGLFKAGMANNAEDM---FQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252
Query: 120 HNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFEL 179
K F +V+ ++D T LL A +++ M + R +P
Sbjct: 253 MEEKHIFPNVIVY----SSIVDGYTKKGLLNE---------AMDVMRKMVQ-RNILPNVF 298
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD 239
G L+D K L +F+E L+EN +F+ + + N G + +
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEEN-NFVIDS-FVNNLKRSG------RMEE 350
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A+++ + M G+ P+ ++ + + G + + M E +V Y+ LI+
Sbjct: 351 ADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLIN 410
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
G KLG ES S M Q + + T+ ++ + + GN+ L+ E +
Sbjct: 411 GLFKLGKYESESFHT-------GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMK 463
Query: 358 K--LEPSGI----VVDRSVGFGIISACVNL-----------------------GLSDKAH 388
L+P+ I +V R G I ++L S +A
Sbjct: 464 SYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRAD 523
Query: 389 SIL---DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
IL D++ G + L Y + +C+ AT + D+ G+ D+ Y+ALI
Sbjct: 524 VILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALI 583
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
S + AF++ M + +Y ++ GL + A ++++ E V
Sbjct: 584 HGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLV 643
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
T ++ ++ K G +++ + MI F P +TY LI+ + ++
Sbjct: 644 PNAT-TYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKK 696
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/370 (18%), Positives = 144/370 (38%), Gaps = 33/370 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I N + G C + + A+K++ +S++ + PN ++ L Y E +
Sbjct: 50 PDIVTYNTLMNGFC-KIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALY 108
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCE 335
+ M +V Y+ +++G K G +E A ME+ ++ +Y
Sbjct: 109 MYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFR------EMEEVGVVPNRFSYAT 162
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII------SACVNLGLSDKAHS 389
++ + GNV A+ G +V R +GF ++ G+++ A
Sbjct: 163 LIDSLFKEGNV---------AEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAED 213
Query: 390 ----ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+L+E C Y + +CK + L+ ++ + +V Y +++
Sbjct: 214 MFQVLLEESLVPNCVT----YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIV 269
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ A + R M + I Y T++ G + + + E+ + +
Sbjct: 270 DGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM-KSRGL 328
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
E +S ++ ++GR+E+A + M+ P+ Y S+++G+ A +
Sbjct: 329 EENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFN 388
Query: 566 MWHEIKRKIS 575
+ E+ K S
Sbjct: 389 IAQEMTEKSS 398
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 165/414 (39%), Gaps = 58/414 (14%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAF--LKVF 201
T +TL+ + N A+ A ALV M +G + +C++ +A LK
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
E+ ++P + N ++ C ++V+DA + M G+RPN ++
Sbjct: 248 EQ----------GKIEPGVVIYNTIIDALC-NYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L G L S M E + +V +S+LI +VK G L A + L
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK-----LYDE 351
Query: 322 NMEQS-DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
+++S D TY ++ GF + +
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRL---------------------------------- 377
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
D+A + + M + C + Y +K +CK R E +L ++S GL +
Sbjct: 378 ----DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y LI +++ +A +F+ M + +Y ++ GL N + E A + E +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE-TALVVFEYL 492
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ ++E + +N +I CKAG++ED + +PN TY ++++G+
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 170/409 (41%), Gaps = 53/409 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+I N+ L G C+G +SDA ++ M +G +P+ +F L + + V
Sbjct: 148 EPDIVTLNSLLNGFCHG-NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L M G +V Y +++G K G+++ A + MEQ
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL------KKMEQG---------- 250
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
K+EP G+V+ + II A N + A ++ EM+
Sbjct: 251 ---------------------KIEP-GVVIYNT----IIDALCNYKNVNDALNLFTEMDN 284
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + Y ++ C R ++A++L+ D+ + +V + ALI+A +
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 344
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGL-MENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A L+ +M + I +Y +++ G M + E F + +D V T +N++
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--YNTL 402
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I FCKA R+++ R M N TY +LI+G+ A + + +++ +++
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF----KQMV 458
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+DG ++++ L L G + + V E Q K+ D + Y
Sbjct: 459 SDGVLPDIMTYSIL---LDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 147/335 (43%), Gaps = 20/335 (5%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
E M LG+ N ++ L + + + + + M + G+ +V +SL++G+
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCH- 163
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
GN S + +++ G M + + + T+ ++ G ++ L+ ++
Sbjct: 164 GNRISDAVSLV-----GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV---DRMVVK 215
Query: 363 GIVVDRSVGFGII-SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
G D V +GI+ + G D A S+L +M G+ +Y + A C +
Sbjct: 216 GCQPDL-VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A L ++ + G++ +V Y++LI + A L DM E +I ++ ++
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 482 GLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ + DE+++ DP + ++S+I+ FC RL++AK MI
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDI----FTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
PN TY +LI G+ A++ + ++ E+ ++
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/408 (18%), Positives = 162/408 (39%), Gaps = 25/408 (6%)
Query: 83 NTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDF 142
+ D A K + + P + N++I L + ++ ++ F ++ +
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE----MDNKGIRPNV 291
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE 202
T ++L+ + N + A L+ M + R P + L+D K V K+++
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
E + ++D P+I+ ++ + G C + +A+ + E M PN ++ L
Sbjct: 351 EMIKRSID-------PDIFTYSSLINGFCMH-DRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ ++ +EL M++ G V Y++LI G+ + ++A + G
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVN 380
+ TY ++ G NG V+ + ++ K+EP + +I
Sbjct: 463 LPDI----MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI-----MIEGMCK 513
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G + + ++ G + Y + +C++ EA L ++ G D G
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
Y+ LI A + D ++ L R+MR R S + ++T ++ + R
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMRSCRFVG-DASTIGLVTNMLHDGR 620
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A +LF DM ++R + + +++ + + ++ +L+ + L E +++ + + ++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVIS-LGEQMQNLGISHNLYTYS 120
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+I+ FC+ +L A L +M+ L +EP+ T SL+NG+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGF 161
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 151/380 (39%), Gaps = 42/380 (11%)
Query: 210 DENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALK 269
+E D P+++ N + C + +A + + M GV+P+ +++ L Y K
Sbjct: 391 EEMADSGLPDVFTYNNLIHWHCQA-HKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKK 449
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
G ++ V+L S M GF +V Y +L+ GY+ + ++A + M+Q+ S
Sbjct: 450 GCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALL------DEMKQNGVS 503
Query: 330 KETY---------------CEV---VKGFLQNGNVKGLA--NLIIEA------------- 356
Y CEV +K F+ G + + N II
Sbjct: 504 CNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTV 563
Query: 357 -QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
Q++ G+ + I G SD A +L+++ G + Y + +C+
Sbjct: 564 YQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQ 623
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
E + A QL++ + GL + Y++LI + + M + I +
Sbjct: 624 EGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTST 683
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
Y T++ G ++ E++ + + ++ H C++G ++ AK+ L M
Sbjct: 684 YTTLIDGFSKDGNVAFALELYSEMMAKGYIP-DAFTFTALTHGLCRSGDIDGAKKLLEEM 742
Query: 536 IFLQFEPNDQTYLSLINGYV 555
L PN Y LINGY+
Sbjct: 743 RRLDVRPNVFIYNMLINGYL 762
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 150/387 (38%), Gaps = 52/387 (13%)
Query: 226 ALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF 285
AL C DA ++ + M + P++ + G + + + M E
Sbjct: 197 ALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEV 256
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE----TYCEVVKGFL 341
GF + Y +++ VK G +E A R N E D K+ +++G+
Sbjct: 257 GFDTCDFTYRTMVDVLVKTGRMEEALRV--------NDEMRDAGKKMDVIVATTLMRGYC 308
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
V NL E K GIV + + +I C +G++ KA+ + +M G
Sbjct: 309 LRQEVGNALNLFKETLK---DGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLP 365
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
LK + R +A L +++ SGL DV Y+ LI + + A +LF
Sbjct: 366 STFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLF 424
Query: 462 RDMREARI-------------YDLKG----------------------SYLTIMTGLMEN 486
M++A + Y KG +Y+T+M G +
Sbjct: 425 DRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAK 484
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ A LDE+ ++ V + +N +I+ C R+ + L+ + F P T
Sbjct: 485 KDFDNAYALLDEMKQN-GVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMT 543
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRK 573
Y S+ING+V A S ++ +++ K
Sbjct: 544 YNSIINGFVKAGMMGSAFTVYQQMREK 570
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 1/188 (0%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A ++ D M G + Y L YCK+ EA +L ++ G + +V Y L+
Sbjct: 419 EALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLM 478
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
I +DF +A++L +M++ + +Y ++ G+ R + L + + +
Sbjct: 479 RGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFI 538
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
+NSII+ F KAG + A ++M PN TY S I+GY L
Sbjct: 539 PTMMT-YNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALK 597
Query: 566 MWHEIKRK 573
M ++++R+
Sbjct: 598 MLNDVRRR 605
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 10/239 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSD-AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+ PNI + ++G C SD A K++ + G++P+ ++ L + +G
Sbjct: 572 LPPNIITYTSFIDGYCR--TGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSH 629
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
++L ++ + G + V Y+SLI+GY L ++ S+ + GG + + TY
Sbjct: 630 ALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADT----STYT 685
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ GF ++GNV L E + G + D + G D A +L+EM
Sbjct: 686 TLIDGFSKDGNVAFALELYSE---MMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEM 742
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
+ +Y + Y ++ + EA +L ++ + G+Q D YD L+ D
Sbjct: 743 RRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKFLEAD 801
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/349 (19%), Positives = 131/349 (37%), Gaps = 57/349 (16%)
Query: 213 LDFMKPNIYACN-----AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
LD MK N +CN + G C + V + + ++++ G P ++ + +
Sbjct: 494 LDEMKQNGVSCNDYTYNVLINGICM-VDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFV 552
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
G+ + M E G ++ Y+S I GY + G + A + + ++ +
Sbjct: 553 KAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKML------NDVRRRG 606
Query: 328 FSKE--TYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGL 383
+ Y ++ GF Q GN+ L++ K L P+ +V + +I+ NL +
Sbjct: 607 LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYN-----SLITGYKNLNM 661
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
+ + M G Y + + K+ A A +L ++ + G D + A
Sbjct: 662 MKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTA 721
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
L S D A L +MR + RP +
Sbjct: 722 LTHGLCRSGDIDGAKKLLEEMRRLDV------------------RPNVFI---------- 753
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+N +I+ + + +L++A R M+ + +P+D TY L++
Sbjct: 754 --------YNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 150/358 (41%), Gaps = 15/358 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PNIY N C V AE+++ M V GV + ++ L LY KG+ + +
Sbjct: 194 PNIYIYNCLFHACSKS-GDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALS 252
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+++ M G + +V Y+SLI G+ K G + A R ++ + + TY ++
Sbjct: 253 IQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMF------SEIKNATPNHVTYTTLI 306
Query: 338 KGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
G+ + ++ + ++EA+ L P G+V S+ + C + + D A+ +L+EM+
Sbjct: 307 DGYCKTNELEEALKMCKLMEAKGLYP-GVVTYNSI---LRKLCQDGRIRD-ANKLLNEMS 361
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ AYCK A + + +GL+ D Y ALI + + +
Sbjct: 362 ERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELE 421
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
SA L M +A +Y I+ G + + + A DE + + + + ++
Sbjct: 422 SAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRG-ICLDVSVYRAL 480
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
I + CK R++ A+R M Y S+ Y + M E+ R+
Sbjct: 481 IRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAYWNVGNVSAASSMLEEMARR 538
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 15/245 (6%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+++ G+V + + + AC G ++A +L+EM+ G + Y L YCK+
Sbjct: 185 KRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKK 244
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
EA + + G+ LD+ +Y++LI + A +F +++ A + +Y
Sbjct: 245 GMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNATPNHV--TY 302
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
T++ G + + E A + +++E + +NSI+ C+ GR+ DA + L M
Sbjct: 303 TTLIDGYCKTNELE-EALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMS 361
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYAL 596
+ + ++ T +LIN Y S L + K K+ G K D F Y
Sbjct: 362 ERKLQADNITCNTLINAYCKIGDLKSAL----KFKNKMLEAGLKP--------DPFTYKA 409
Query: 597 VKGGF 601
+ GF
Sbjct: 410 LIHGF 414
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 167/429 (38%), Gaps = 39/429 (9%)
Query: 53 SPTQQQQQQTLTQDNITSLETNLH------KSLLTNN-TDEAWKSFKSLTANSLFPSKPV 105
S Q Q Q + ++ +LH SLL + T WK +K + + P+ +
Sbjct: 139 SKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYI 198
Query: 106 TNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALV 165
N L S D ++RA ++ ++ L D T +TLL A ++
Sbjct: 199 YNCLFHACSKSGD---VERA-EQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSI- 253
Query: 166 KCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNA 225
+NR M E G +DI NS F K + + + PN
Sbjct: 254 ----QNR--MERE---GINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNATPNHVTYTT 304
Query: 226 ALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE--KIVELESLMN 283
++G C + +A K+ + M G+ P G + Y L+ L + +I + L+N
Sbjct: 305 LIDGYC-KTNELEEALKMCKLMEAKGLYP-----GVVTYNSILRKLCQDGRIRDANKLLN 358
Query: 284 EFG---FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
E + + ++LI+ Y K+G+L+SA + L G ++ F TY ++ GF
Sbjct: 359 EMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAG-LKPDPF---TYKALIHGF 414
Query: 341 LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
+ ++ L+ + +G I+ D ++ DE + G
Sbjct: 415 CKTNELESAKELMFS---MLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGIC 471
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
+ + VY +++ CK R A +L + G+ + Y ++ A + +A S+
Sbjct: 472 LDVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAYWNVGNVSAASSM 531
Query: 461 FRDMREARI 469
+M R+
Sbjct: 532 LEEMARRRL 540
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 152/369 (41%), Gaps = 39/369 (10%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+K N+Y N + C + A+ + M G++P ++ L Y+L+G E
Sbjct: 222 IKSNVYTFNIMINVLCKE-GKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGA 280
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNL--------------ESASRTILL--CLG 319
+ S M GF + Y+ ++S G +S S IL+ C
Sbjct: 281 RMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIGLVPDSVSYNILIRGCSN 340
Query: 320 GGNME-----QSDFSKE-------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
G++E + + K+ TY ++ G ++ LI E ++ GIV+D
Sbjct: 341 NGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE---KGIVLD 397
Query: 368 RSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
SV + I I+ G + KA ++ DEM G Y + C+ ++T EA +L
Sbjct: 398 -SVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELF 456
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ G++ D+ + L++ + + AFSL ++M I +Y +M GL
Sbjct: 457 EKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGE 516
Query: 487 HRPELMAAFLDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
+ E + E+ R +K +N++I + K G + A M+ L F P
Sbjct: 517 GKFEEARELMGEM---KRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTL 573
Query: 545 QTYLSLING 553
TY +L+ G
Sbjct: 574 LTYNALLKG 582
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 159/401 (39%), Gaps = 28/401 (6%)
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
EC + ++ D P CN L L + +A M + ++ N +F +
Sbjct: 177 ECFYLMKEKGFD---PKTETCNHIL-SLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIM 232
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ +G +K +M FG +V Y++L+ GY G +E A I
Sbjct: 233 INVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMII------SE 286
Query: 323 MEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISACV 379
M+ F + TY ++ G + ++++ G+V D SV + I I C
Sbjct: 287 MKSKGFQPDLQTYNPILSWMCNEGRASEV------LREMKGIGLVPD-SVSYNILIRGCS 339
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
N G + A + DEM G Y + E++ A L+ +I G+ LD
Sbjct: 340 NNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSV 399
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y+ +I D + AF+L +M I + +Y +++ L ++ ++V
Sbjct: 400 TYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKV 459
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
V ++ N+++ C G ++ A L+ M + +P+D TY L+ G +
Sbjct: 460 V-GKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGK 518
Query: 560 YFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
+ + E+KR +GIK +H + + K G
Sbjct: 519 FEEARELMGEMKR-------RGIKPDHISYNTLISGYSKKG 552
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 130/302 (43%), Gaps = 29/302 (9%)
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-------- 310
F F+ Y + ++ +E LM E GF + + ++S +L +E+A
Sbjct: 159 FDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMY 218
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
I + N+ + KE + KGFL I+E+ ++P+ + + V
Sbjct: 219 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLG----------IMESFGIKPTIVTYNTLV 268
Query: 371 -GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
G+ + G + A I+ EM + G L Y P L C E R A++++ ++
Sbjct: 269 QGYSL------RGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREM 319
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
GL D +Y+ LI + D ++AF+ +M + + +Y T++ GL ++
Sbjct: 320 KGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 379
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
E + E+ E V + + +N +I+ +C+ G + A M+ +P TY S
Sbjct: 380 EAAEILIREIREKGIV-LDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTS 438
Query: 550 LI 551
LI
Sbjct: 439 LI 440
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 127/338 (37%), Gaps = 41/338 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ N L C + A +V+ M +G+ P+ S+ L + G E
Sbjct: 293 QPDLQTYNPILSWMC----NEGRASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAF 348
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
M + G Y++LI G +E+A I G + S TY V
Sbjct: 349 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS----VTYNIV 404
Query: 337 VKGFLQNGNVK----------------------GLANLIIEAQKLEPSGIVVDRSVGFGI 374
+ G+ Q+G+ K L ++ K + + ++ VG G+
Sbjct: 405 INGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGM 464
Query: 375 ISACVNL----------GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
V + G D+A S+L EM+ Y ++ C E + EA +
Sbjct: 465 KPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARE 524
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L+ ++ G++ D +Y+ LI D + AF + +M +Y ++ GL
Sbjct: 525 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLS 584
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKA 522
+N EL L E+ + V + S+I A K+
Sbjct: 585 KNQDGELAEELLREMKSEGIVP-NDSSFCSVIEAMSKS 621
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 146/336 (43%), Gaps = 25/336 (7%)
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG----GNMEQ 325
G+++ I L L+N F ++ F S++S +KLG LE + T L G G M+Q
Sbjct: 92 GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLG-LEPSIVTFTTLLNGLCMEGKMDQ 150
Query: 326 SDFSKE------------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG 373
+ TY ++ ++G + + +K+ VV+ S
Sbjct: 151 VMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYST--- 207
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I G D+A S+ D M + GC+ + Y + YCK R EA QL+ + G
Sbjct: 208 LIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKG 267
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
L D+ + +I + +A LFR + +Y ++ GL ++ E
Sbjct: 268 LVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAF 327
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A E ++ V+ + +I + CK G+++D K R+I +PN TY +L+ G
Sbjct: 328 ALFQE-MQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALV-G 385
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
+ E +++ H++ RK+ DG K +N++
Sbjct: 386 ALCKE---GLIIEAHKLFRKMEEDGCTPDKCAYNVI 418
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 124/291 (42%), Gaps = 20/291 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN+Y N + ++ ++A ++ M +G PN ++ L Y L+G ++
Sbjct: 163 LQPNVYTYNVIINSLSKSGKA-NEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEA 221
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ LM G + + Y+SL++GY K+ +E A + + L G + T+
Sbjct: 222 RSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDI----VTFTT 277
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHS 389
++ G + G L I A P+ G+++D G NL ++A +
Sbjct: 278 IISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHG------NL---EEAFA 328
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ EM L +Y + + CK + + +L + GL+ +V Y AL+ A
Sbjct: 329 LFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALC 388
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
A LFR M E K +Y I+ G +++ P + ++E+V
Sbjct: 389 KEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMV 439
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/344 (18%), Positives = 135/344 (39%), Gaps = 52/344 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+I L G C + + + M V G++PN ++ + + G +
Sbjct: 128 LEPSIVTFTTLLNGLCME-GKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEA 186
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ M + G +V YS+LI GY G ++ A L + G TY
Sbjct: 187 LGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNV----YTYTS 242
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ + +++E + ++D ++ G++ V
Sbjct: 243 LMNGYCK-------------IERIEEAVQLLDETLRKGLVPDIVT--------------- 274
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ + C+ R A QL I + G ++ Y L++ + +
Sbjct: 275 ----------FTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLE 324
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHR----PELMAAFLDEVVEDPRVEVKTHD 511
AF+LF++M+ + + Y ++ L + + EL + +DE ++ P V +
Sbjct: 325 EAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLK-PNV----YT 379
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+ +++ A CK G + +A + R+M P+ Y +I G++
Sbjct: 380 YTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFL 423
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 134/340 (39%), Gaps = 56/340 (16%)
Query: 218 PNIYACNAAL-EGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKI 275
PN NA + E C G + A K+ + M G N ++ + L+ + +++ +
Sbjct: 370 PNTVTYNALINELCTEGRFGI--ALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAM 427
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
V ++ + G S +V Y++LI +K G L +A+R + + M++S+ + TY
Sbjct: 428 VVFNKMLKD-GPSPTVVTYNTLIVENLKRGYLNNATRFLYM------MKESNCEPDERTY 480
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
CE++ GF + G + D A S E
Sbjct: 481 CELISGFCKGGKL--------------------------------------DSATSFFYE 502
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M CG S Y + YCKE + A L + +G + Y+A+I
Sbjct: 503 MLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNR 562
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
F A M E + +Y +++ GL +N L E +E H +
Sbjct: 563 FSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHE-MEKKNCLPNAHTYT 621
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
S+I+ C+ G+++ A+R EP TY +L++G
Sbjct: 622 SLIYGLCQEGKVDAAERLTEN----GCEPTIDTYSTLVSG 657
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 161/450 (35%), Gaps = 62/450 (13%)
Query: 177 FELWGGFLVDICRKNSNFVAFLKVFEECCRIA-LDENLDFMK--------PNIYACNAAL 227
FE++ + D C NS V + + C + E +D ++ P +Y +
Sbjct: 252 FEVFDRMVKDGCNPNS--VTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPI 309
Query: 228 EGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGF 287
C + V DA ++ +M G P+ ++ + G E + + M + G
Sbjct: 310 SSLC-DIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGL 368
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK 347
V Y++LI+ G A + G G + + +TY +++KG +++
Sbjct: 369 VPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANA----QTYNQIIKGLFGMDDIE 424
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
+ + K PS VV + +I + G + A L M C Y
Sbjct: 425 KAMVVFNKMLKDGPSPTVVTYNT---LIVENLKRGYLNNATRFLYMMKESNCEPDERTYC 481
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ +CK + AT ++ G+ + Y A+I+ A SLF M E
Sbjct: 482 ELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEE- 540
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
G +I T +N+II K R +
Sbjct: 541 -----NGCSASIET------------------------------YNAIISGLSKGNRFSE 565
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN 587
A++ +M +PN TY SLING ++HE+++K + H
Sbjct: 566 AEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKK------NCLPNAHT 619
Query: 588 LVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
+ +Y L + G DA ++ E E +
Sbjct: 620 YT-SLIYGLCQEGKVDAAERLTENGCEPTI 648
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 21/256 (8%)
Query: 313 TILLCLGGGNMEQSDFSKETYCEV----VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR 368
T+LL LG +M S ++ Y ++ VK L N + N++ + K++ + +V ++
Sbjct: 167 TLLLQLGKFDMVTS--AQNVYAQIFSSGVKPSLLTFNT--MINILCKKGKVQEAVLVFNK 222
Query: 369 SVGFG-----------IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
F I+ C N L DKA + D M GC+ Y + C E
Sbjct: 223 IFQFDLCPDAFTYTSLILGHCRNRKL-DKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
R EA ++ +++ G++ V Y I + A +L R M + +Y
Sbjct: 282 RIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYT 341
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
I++GL + EL +++++ V T +N++I+ C GR A + M
Sbjct: 342 AIISGLFRAGKMELAIGMYHKMLKEGLVP-NTVTYNALINELCTEGRFGIALKIFDWMEG 400
Query: 538 LQFEPNDQTYLSLING 553
N QTY +I G
Sbjct: 401 HGTLANAQTYNQIIKG 416
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 96/238 (40%), Gaps = 12/238 (5%)
Query: 227 LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG 286
+ G C G + A M G+ PN+ ++ + Y +G + + L M E G
Sbjct: 484 ISGFCKG-GKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV 346
S+ + Y+++ISG K GN S + + ++ + TY ++ G +N
Sbjct: 543 CSASIETYNAIISGLSK-GNRFSEAEKFCAKMTEQGLQPNTI---TYTSLINGLCKN-TA 597
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
LA I ++E + + +I G D A + + GC + Y
Sbjct: 598 TNLAFKIF--HEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTEN----GCEPTIDTY 651
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
+ C+E R+ EA+QLV ++ GL + Y +L+ A S A +F M
Sbjct: 652 STLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLM 709
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 97/245 (39%), Gaps = 16/245 (6%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKG 339
M E G + Y+SLI+G K A + ME+ + + TY ++ G
Sbjct: 573 MTEQGLQPNTITYTSLINGLCKNTATNLAFKIF------HEMEKKNCLPNAHTYTSLIYG 626
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
Q G V A++L +G ++S G S++A +++ M G
Sbjct: 627 LCQEGKVDA-------AERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGL 679
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
S + +Y L A+CK + A ++ ++ G Q + Y LI A + A +
Sbjct: 680 SPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALN 739
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAF 519
+F+ + + + + ++ GL++ +L FL ++E H + +
Sbjct: 740 IFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFL-YLMESRNCTPSLHTYIILAREL 798
Query: 520 CKAGR 524
K G+
Sbjct: 799 SKVGK 803
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 152/342 (44%), Gaps = 19/342 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ CN+ ++G C +Q++ AE+V+ M + P+ +++ L + Y G ++
Sbjct: 152 IPPDVVTCNSIIDGLCK-VQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEA 210
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS--DFSKETY 333
V + M+ G V YS LI K G + +R IL +M QS + + TY
Sbjct: 211 VRILKQMSRHGQPPNGVTYSMLIDCLCKFGG-HTEAREIL-----NSMIQSRGNPNVATY 264
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNLGLSDKAHSILD 392
++ G+ G++ + NLI + +G+ D + F I I A V G D+A +
Sbjct: 265 GGLLHGYATKGDLVEMNNLI---DLMVQNGVRPDHHI-FNIQIYAYVKCGRLDEAMLTFN 320
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M G + Y + CK R A + GL D+ + LI
Sbjct: 321 KMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYG 380
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH-- 510
++ A LF +M + I + T++ L + + D + P VK +
Sbjct: 381 KWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLM---PIASVKPNVV 437
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+N+IIH + AG+L++ + L M+ + +PN T+ +L++
Sbjct: 438 SYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLD 479
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 4/202 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS- 432
+IS C +G + A + L ++ G + P L+ C E RT++A +V+ +
Sbjct: 19 LISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNIVIRWTPKL 78
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG--SYLTIMTGLMENHRPE 490
G DV +Y L++ + + A L M E + SY T++ G +
Sbjct: 79 GCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVG 138
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
E++ D + NSII CK ++ A+ LR+M P+ TY SL
Sbjct: 139 KAYTLFCEML-DRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSL 197
Query: 551 INGYVTAEQYFSVLMMWHEIKR 572
++GY+++ Q + + ++ R
Sbjct: 198 VHGYLSSGQLKEAVRILKQMSR 219
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 114/279 (40%), Gaps = 31/279 (11%)
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
+ C SD + ++ GC+ + Y LK C E + EA L+ ++ G
Sbjct: 57 TLCAEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDH 116
Query: 436 L--DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+V +Y +I + A++LF +M + I + +I+ GL + +
Sbjct: 117 CPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAE 176
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN- 552
L ++ D + +NS++H + +G+L++A R L++M PN TY LI+
Sbjct: 177 EVLRQMF-DKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDC 235
Query: 553 -----GYVTAEQYFSVLM-------------MWH---------EIKRKISTDGQKGIKFE 585
G+ A + + ++ + H E+ I Q G++ +
Sbjct: 236 LCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPD 295
Query: 586 HNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
H++ + +YA VK G D M K ++ + D Y
Sbjct: 296 HHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISY 334
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 128/328 (39%), Gaps = 14/328 (4%)
Query: 230 CCY-GLQSVSDAE--KVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELESLMNEF 285
CCY G +++ A ++I+T G+R N SF L L A K + + + +
Sbjct: 23 CCYVGCLNLAFAALGQIIKT----GLRANAISFTPILRTLCAEKRTSDAMNIVIRWTPKL 78
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
G + + Y+ L+ G E A I + G+ + +Y V+ GF +
Sbjct: 79 GCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVV--SYTTVIHGFFKEDE 136
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
V L E + GI D II + DKA +L +M
Sbjct: 137 VGKAYTLFCE---MLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTT 193
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + Y + EA +++ +S G + Y LI+ A + M
Sbjct: 194 YNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMI 253
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
++R +Y ++ G M +D +V++ V H +N I+A+ K GRL
Sbjct: 254 QSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQN-GVRPDHHIFNIQIYAYVKCGRL 312
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLING 553
++A T +M P+ +Y ++I+G
Sbjct: 313 DEAMLTFNKMRQQGLMPDIISYGTMIDG 340
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 189/474 (39%), Gaps = 35/474 (7%)
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICR-KNSNFVAFL 198
LDFQT + + ++ P L+K + +R L+ ++ R + + + F
Sbjct: 100 LDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFD 159
Query: 199 KVFEECCRIAL-DENLD---FMK-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
+ CC++ + DE ++ MK P CN L L + +A M
Sbjct: 160 LLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILT-LLSRLNRIENAWVFYADMYR 218
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
+ ++ N +F + + +G +K +M FG +V Y++L+ G+ G +E
Sbjct: 219 MEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEG 278
Query: 310 ASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A I M+ F + TY ++ G + ++++ G+V D
Sbjct: 279 ARLII------SEMKSKGFQPDMQTYNPILSWMCNEGRASEVL------REMKEIGLVPD 326
Query: 368 RSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
SV + I I C N G + A + DEM G Y + E++ A L+
Sbjct: 327 -SVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILI 385
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+I G+ LD Y+ LI D + AF+L +M I + +Y +++ L
Sbjct: 386 REIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRK 445
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
++ ++VV ++ N+++ C G ++ A L+ M + P+D T
Sbjct: 446 NKTREADELFEKVV-GKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVT 504
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
Y L+ G ++ + E+KR +GIK +H + + K G
Sbjct: 505 YNCLMRGLCGEGKFEEARELMGEMKR-------RGIKPDHISYNTLISGYSKKG 551
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 153/369 (41%), Gaps = 39/369 (10%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+K N+Y N + C + A+ + M V G++P ++ L ++L+G E
Sbjct: 221 IKSNVYTFNIMINVLCKE-GKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNL--------------ESASRTILL--CLG 319
+ S M GF M Y+ ++S G +S S IL+ C
Sbjct: 280 RLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSN 339
Query: 320 GGNME-----QSDFSKE-------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
G++E + + K+ TY ++ G ++ LI E ++ GIV+D
Sbjct: 340 NGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE---KGIVLD 396
Query: 368 RSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
SV + I I+ G + KA ++ DEM G Y + C++++T EA +L
Sbjct: 397 -SVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ G++ D+ + L++ + AFSL ++M I +Y +M GL
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 487 HRPELMAAFLDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
+ E + E+ R +K +N++I + K G + A M+ L F P
Sbjct: 516 GKFEEARELMGEM---KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Query: 545 QTYLSLING 553
TY +L+ G
Sbjct: 573 LTYNALLKG 581
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 119/315 (37%), Gaps = 40/315 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ N L C + A +V+ M +G+ P+ S+ L + G E
Sbjct: 292 QPDMQTYNPILSWMC----NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
M + G Y++LI G +E+A I G + S TY +
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS----VTYNIL 403
Query: 337 VKGFLQNGNVK----------------------GLANLIIEAQKLEPSGIVVDRSVGFG- 373
+ G+ Q+G+ K L ++ K + + ++ VG G
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 374 ---------IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
++ +G D+A S+L EM+ + Y ++ C E + EA +
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L+ ++ G++ D +Y+ LI D + AF + +M +Y ++ GL
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS 583
Query: 485 ENHRPELMAAFLDEV 499
+N EL L E+
Sbjct: 584 KNQEGELAEELLREM 598
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 161/399 (40%), Gaps = 39/399 (9%)
Query: 179 LWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMK-----PNIYACNAALEGCCYG 233
++ +++D+CR N EE ++ + MK PN+Y +A ++G C
Sbjct: 236 IYTIYILDLCRDNK--------MEEA-----EKMFELMKKHGVLPNLYTYSAMIDGYC-K 281
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESL---MNEFGFSSQ 290
+V A + + + V + PN FG L + ++V SL M +FG
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKA---RELVTARSLFVHMVKFGVDPN 338
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKG 348
+ Y+ LI G+ K GN+ A + ME + S + TY ++ G V
Sbjct: 339 LYVYNCLIHGHCKSGNMLEAVGLL------SEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 349 LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
L QK++ I + +I ++A + EM A G + +
Sbjct: 393 ANRLF---QKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ YC A L +++ G+ DV Y ALI+A + + A L+ DM EA
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH-DWNSIIHAFCKAGRLED 527
I+ ++ ++ G + R + F E + + H + +I C+ G +
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQE--NNQQRSCWNHVGFTCLIEGLCQNGYILR 567
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
A R M P+ +Y+S++ G++ ++ +M+
Sbjct: 568 ASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMML 606
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 7/209 (3%)
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
++ Q + G+V D + F + C GL K +LDEM + G + +Y +
Sbjct: 185 VDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDL 244
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C++++ EA ++ + G+ ++ Y A+I+ + + + A+ L++++ A +
Sbjct: 245 CRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNV 304
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+ T++ G + + +V+ DP + V +N +IH CK+G + +A
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV----YNCLIHGHCKSGNMLEAVG 360
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
L M L P+ TY LING +Q
Sbjct: 361 LLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 126/348 (36%), Gaps = 86/348 (24%)
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
CC+ S EK+++ M+ LG++PN ++ +Y L ++ +E M E
Sbjct: 208 CCFKQGLYSKKEKLLDEMTSLGIKPNV----YIYTIYILDLCRDNKMEEAEKMFE----- 258
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK-- 347
L+ + L NL TY ++ G+ + GNV+
Sbjct: 259 -------LMKKHGVLPNLY-----------------------TYSAMIDGYCKTGNVRQA 288
Query: 348 -GLANLIIEAQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
GL I+ A+ L P+ +V V GF V A S+ M G L V
Sbjct: 289 YGLYKEILVAELL-PNVVVFGTLVDGFCKARELVT------ARSLFVHMVKFGVDPNLYV 341
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + +CK EA L+ ++ S L DV Y LI A LF+ M+
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
RI+ +Y NS+IH +CK +
Sbjct: 402 NERIFPSSATY------------------------------------NSLIHGYCKEYNM 425
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
E A M EPN T+ +LI+GY + + ++ E+ K
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK 473
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 157/359 (43%), Gaps = 11/359 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ A ++G C ++ +A +V+ M + GVRP+E ++ L Y
Sbjct: 365 LKPSVATYTALIDGYCRNGRT-DEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPA 423
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++L + S Y+ LI G+ +LG + S ++ IL C+ ++ TY
Sbjct: 424 LDLIKYLRSRSISINRTMYTILIDGFCQLGEV-SKAKQILKCMLADGIDPDVI---TYSA 479
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + G + ++ QK SG++ + + ++ G + +A ++
Sbjct: 480 LINGMCKMGMIHETKEILSRMQK---SGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIY 536
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G ++ L ++ +E AEA Q +S + DV +++ +I++ +
Sbjct: 537 RSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVL 596
Query: 456 SAFSLFRDM-REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
AFS++ +M R D+ +Y +++ GL + F+ ++E + N+
Sbjct: 597 EAFSVYDNMVRHGWPPDI-CTYGSLLRGLCQGGHLVQAKEFMVYLLEKA-CAIDEKTLNT 654
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++ CK G L++A +M+ P+ TY L++G+ + L++ + K
Sbjct: 655 LLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEK 713
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 3/179 (1%)
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
S C LS KA S+L +M C + Y L Y K+ R A +++ D+ +G++
Sbjct: 239 SLCTQGKLS-KAESMLQKMKNCRLPNAV-TYNTILNWYVKKGRCKSALRILDDMEKNGIE 296
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
D+ Y+ +I+ + A+ L + MRE + + SY T++ G + L
Sbjct: 297 ADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYI 356
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++++ ++ + ++I +C+ GR ++A+R L M P++ TY +L+NGY
Sbjct: 357 FNQMLRQS-LKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGY 414
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/427 (18%), Positives = 171/427 (40%), Gaps = 26/427 (6%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + P++ +A + G C + + + ++++ M GV PN + L + + G +
Sbjct: 468 DGIDPDVITYSALINGMC-KMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAK 526
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ ++ + G + V +++L+ + + G + A + M+ S F ++
Sbjct: 527 EALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYM---SRMKIS-FDVASF 582
Query: 334 CEVVKGFLQNGNV----KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
++ + Q GNV N++ P I S+ G+ G +A
Sbjct: 583 NCIIDSYCQRGNVLEAFSVYDNMVRHGW---PPDICTYGSLLRGLCQG----GHLVQAKE 635
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ + C++ L CK EA L + + + D Y L++
Sbjct: 636 FMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFC 695
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
A L + M E + +Y ++ GL+ + + + E++ +
Sbjct: 696 KRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADC 755
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+NS+++ + K G++ + +R +R M + P+ +Y L++GY+ Q L ++ +
Sbjct: 756 IAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRD 815
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYK---Q 626
+ + +GIK ++ ++ L + G + ++ +EK VF D + +
Sbjct: 816 MVK-------EGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIK 868
Query: 627 AFMENHK 633
AF E K
Sbjct: 869 AFSEKSK 875
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 112/280 (40%), Gaps = 27/280 (9%)
Query: 222 ACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESL 281
A N+ + G G Q +++ E+++ M V P+ +S+ L + Y KG + + L
Sbjct: 757 AYNSMMNGYLKGGQ-INEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRD 815
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTI-LLCLGGGNMEQSDFSKETYCEVVKGF 340
M + G V Y LI G + G +E A + + + L G + F ++K F
Sbjct: 816 MVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDI-----LIKAF 870
Query: 341 LQN----------------GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
+ G++ G L + ++ G+V I+ G
Sbjct: 871 SEKSKMSNALQLFSYMKWVGDIDGAFEL---KEDMKALGVVPSEVAESSIVRGLCKCGKV 927
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
++A + + G + + + CKE + +A L + S GL++DV Y+ L
Sbjct: 928 EEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVL 987
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
I + A L+ +M+ + +Y+T +TG M
Sbjct: 988 ITGLCNKKCICDALDLYEEMKSKGLLPNITTYIT-LTGAM 1026
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 94/470 (20%), Positives = 179/470 (38%), Gaps = 74/470 (15%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICR-----KNSNFV 195
D + + ++ S AF++ M ++ + +G L +C+ + F+
Sbjct: 578 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 637
Query: 196 AFLKVFEECCRI----------------ALDENLDFMK--------PNIYACNAALEGCC 231
+L E+ C I LDE LD + P+ Y L+G C
Sbjct: 638 VYL--LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFC 695
Query: 232 YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-QEKIVELESLM-----NEF 285
V A +++ M G+ P+ +AY L GL E V+ S M +
Sbjct: 696 -KRGKVVPALILLQMMLEKGLVPDT-----IAYTCLLNGLVNEGQVKAASYMFQEIICKE 749
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQN 343
G + + Y+S+++GY+K G + R + NM +++ S +Y ++ G+++
Sbjct: 750 GLYADCIAYNSMMNGYLKGGQINEIERLM------RNMHENEVYPSSASYNILMHGYIKK 803
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
G L+ + + + GI D +I GL + A L++M G
Sbjct: 804 GQ---LSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDN 860
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
+ +KA+ ++ + + A QL + G D AF L D
Sbjct: 861 LAFDILIKAFSEKSKMSNALQLFSYMKWVG-------------------DIDGAFELKED 901
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M+ + + + +I+ GL + + E ++ V + +++H CK
Sbjct: 902 MKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPT-IATFTTLMHGLCKEF 960
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+++DA + M + + TY LI G + L ++ E+K K
Sbjct: 961 KIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSK 1010
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 136/354 (38%), Gaps = 44/354 (12%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ AC A + CC V++A +V + M LGV PNE ++ L Y ++G +E L
Sbjct: 37 DVAACTALVHVCCQS-GDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFAL 95
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
+ M G + Y+ LI + + G +SA +
Sbjct: 96 FAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSA---------------------------R 128
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
VKG+ + ++ L I C + L D A + + M G
Sbjct: 129 LLFDEMPVKGVVHNVVSYNIL--------------IAGLCRHSKLKD-AVQLFEAMRREG 173
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ + + Y K + A A + ++GL V Y+ LI +D A
Sbjct: 174 IRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAV 233
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
F DM+E + K +Y ++ + + + L E +E +EV + ++HA
Sbjct: 234 RAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSE-MEKAGLEVDVQSYGVLLHA 292
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
C G++ A++ + M +PN Y +I GY + L + E+++
Sbjct: 293 LCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRK 346
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 14/252 (5%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+ + N + G C + DA ++ E M G+RP+ +F L Y G +
Sbjct: 142 NVVSYNILIAGLCRH-SKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHF 200
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEV 336
+ M G +V Y+ LI G+ ++ ++ A R L +M++ +K TY +
Sbjct: 201 FNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFL------DMKERGLAPTKVTYTIL 254
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVD-RSVGFGIISACVNLGLSDKAHSILDEMN 395
+ F + + ++ E +E +G+ VD +S G + + C+ G A + M+
Sbjct: 255 IAAFAKENEMDRAFMMLSE---MEKAGLEVDVQSYGVLLHALCME-GKMMHARKLFQSMD 310
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G +Y + Y +E + +A +L+M++ +GL +V +Y I Q
Sbjct: 311 LKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQ 370
Query: 456 SAFSLFRDMREA 467
A +L DM A
Sbjct: 371 EAEALIDDMEHA 382
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 114/289 (39%), Gaps = 14/289 (4%)
Query: 214 DFMKPNIYACNAAL-EGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
D ++PN+Y N + E C G A + + M V GV N S+ L
Sbjct: 102 DGVEPNLYTYNCLIGEWCRTG--EFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKL 159
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SK 330
+ V+L M G +V ++ LI GY K G + +A M+ + S
Sbjct: 160 KDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFF------NQMKAAGLPPSV 213
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY E++ GF + V+ +A + ++ G+ + +I+A D+A +
Sbjct: 214 VTYNELICGFCR---VRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMM 270
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L EM G V + Y L A C E + A +L + G++ + YD +I
Sbjct: 271 LSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGR 330
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
A L +MR+ + SY + L + + A +D++
Sbjct: 331 EGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDM 379
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 134/327 (40%), Gaps = 43/327 (13%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M +V Y+++I+G K LE A +L+ + G + E + F TYC ++ G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAV-DLLVEMEGSSCEPNSF---TYCILMDGLC 56
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
+ G V+ L+ E ++ G+ VD V +IS + G D+ ++ DEM G S
Sbjct: 57 KEGRVEEAMRLLGEMKR---KGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISP 113
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ VY + +CK+ EAT ++ ++ G+Q DV Y +I + A LF
Sbjct: 114 NVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLF 173
Query: 462 RDMREA--------------------------RIYDL---KG------SYLTIMTGLMEN 486
M E +I++ KG SY T++ GL N
Sbjct: 174 DLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNN 233
Query: 487 HRPELMAAFLDEVVEDPR-VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+ + ++ED VE +N++I CK GRL+ A MI N
Sbjct: 234 GKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLF 293
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKR 572
T LI Y+ + + +W + +
Sbjct: 294 TCHILIGEYIKSGIIDKAMELWKRVHK 320
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 159/390 (40%), Gaps = 42/390 (10%)
Query: 216 MKPNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+ PN+ + + G C GL +A V+ TM+ G++P+ ++ + G K
Sbjct: 111 ISPNVVVYSCLINGFCKKGLWR--EATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARK 168
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
++L LM E G V Y+ LI+G K G + A + L G +Y
Sbjct: 169 ALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKR----LEVVSYN 224
Query: 335 EVVKGFLQNGNV----KGLANLIIEAQKLEPSGIV-------------VDRSV------- 370
++ G NG + K ++L+ + +EP I +D++V
Sbjct: 225 TLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMI 284
Query: 371 ---GFGIISAC-------VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
FG + C + G+ DKA + ++ G Y + +CK H
Sbjct: 285 ERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLN 344
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
A L + SGL + +Y+ L+ + + A LF++M+E+ S+ ++
Sbjct: 345 FAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMI 404
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
G ++ L++ ++ + + ++S I+ K G++E+AK MI
Sbjct: 405 DGTLKAGDIHSAKELLND-MQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGI 463
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
P++ Y SLI G+ ++ V+ + ++
Sbjct: 464 TPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 144/368 (39%), Gaps = 36/368 (9%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T + L+ + AF + + M + + + ++ +C N +K+F
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCN-NGKLDEAMKLFS- 244
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
+L E+ ++++P++ N ++G C + A ++ +TM G N + L
Sbjct: 245 ----SLLEDGNYVEPDVITFNTVIQGLCKE-GRLDKAVEIYDTMIERGSFGNLFTCHILI 299
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA----SRTILLCLG 319
Y G+ +K +EL +++ G YS +I G+ K+ L A SR + L
Sbjct: 300 GEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLS 359
Query: 320 GG----NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI- 374
N + KE+ E + Q ++ EP ++ F I
Sbjct: 360 PTLFDYNTLMASLCKESSLEQARRLFQE----------MKESNCEPD------TISFNIM 403
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
I + G A +L++M G + Y + K + EA + +SG+
Sbjct: 404 IDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGI 463
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMRE-ARIYDLK--GSYLTIMTGLMEN-HRPE 490
D YD+LI+ + + + +L R M + I DL+ S LT + E+ H E
Sbjct: 464 TPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVME 523
Query: 491 LMAAFLDE 498
L+ F E
Sbjct: 524 LLPNFSSE 531
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 168/376 (44%), Gaps = 21/376 (5%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
+R + F L Y G + VEL M G + +V Y++L++G+ K+G+L +A
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
+ +G ++ + + TY ++ + ++ + L + + ++ +V D
Sbjct: 73 KL----MGEISLVNLEPNVITYTTLIDAYCKS---QCLEDALYMYDEMTVKSLVPDVVTY 125
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
I++ G ++A S+ EM G Y + + KE AEA L +
Sbjct: 126 TCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV 185
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG---LMENHR 488
G+ DV Y AL++ + +A +F+ + E + +Y ++ G L + ++
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNK 245
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
EL+ ++E P V V ++SI+ + K G L +A +R+M+ PN Y
Sbjct: 246 GELLLQEMEEKHIFPNVIV----YSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYG 301
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQV 608
+LI+GY A+Q L ++ E+K +G++ + ++D+F+ L + G + ++
Sbjct: 302 TLIDGYFKADQRGIALDLFKEMK-------SRGLEENNFVIDSFVNNLKRSGRMEEADEL 354
Query: 609 VEKSQEMKVFVDKWKY 624
+ + D+ Y
Sbjct: 355 FKDMMSRGLLPDRVNY 370
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 144/356 (40%), Gaps = 14/356 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA-YLYALKGLQEKIV 276
P++ + G C V +A+ V M +GV PN S+ L L+ + E V
Sbjct: 120 PDVVTYTCIMNGLCKS-GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFV 178
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK-ETYCE 335
L+ M G +V Y++L+ G K G +A + L E+S TY
Sbjct: 179 -LQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLL-----EESLVPNCVTYSA 232
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + G+V L+ Q++E I + V I+ GL ++A ++ +M
Sbjct: 233 LIDGHCKLGDVNKGELLL---QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ VY + Y K + A L ++ S GL+ + D+ + S +
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A LF+DM + + +Y ++M G + + E+ E +N +
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSS-GFDVVAYNVL 408
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
I+ K G+ E ++ M L P+ T+ ++IN Y + L + +E+K
Sbjct: 409 INGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMK 463
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 141/357 (39%), Gaps = 42/357 (11%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ +A+++ + M G+ P+ ++ + + G + + M E +V Y+
Sbjct: 348 MEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNV 407
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
LI+G KLG ES S M Q + + T+ ++ + + GN+ L+
Sbjct: 408 LINGLFKLGKYESESFHT-------GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460
Query: 355 EAQK--LEPSGI----VVDRSVGFGIISACVNL-----------------------GLSD 385
E + L+P+ I +V R G I ++L S
Sbjct: 461 EMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520
Query: 386 KAHSIL---DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+A IL D++ G + L Y + +C+ AT + D+ G+ D+ Y+
Sbjct: 521 RADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYN 580
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
ALI S + AF++ M + +Y ++ GL + A ++++ E
Sbjct: 581 ALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKER 640
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
V T ++ ++ K G +++ + MI F P +TY LI+ + ++
Sbjct: 641 GLVPNAT-TYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKK 696
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/370 (18%), Positives = 144/370 (38%), Gaps = 33/370 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I N + G C + + A+K++ +S++ + PN ++ L Y E +
Sbjct: 50 PDIVTYNTLMNGFC-KIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALY 108
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCE 335
+ M +V Y+ +++G K G +E A ME+ ++ +Y
Sbjct: 109 MYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFR------EMEEVGVVPNRFSYAT 162
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII------SACVNLGLSDKAHS 389
++ + GNV A+ G +V R +GF ++ G+++ A
Sbjct: 163 LIDSLFKEGNV---------AEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAED 213
Query: 390 ----ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+L+E C Y + +CK + L+ ++ + +V Y +++
Sbjct: 214 MFQVLLEESLVPNCVT----YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIV 269
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ A + R M + I Y T++ G + + + E+ + +
Sbjct: 270 DGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM-KSRGL 328
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
E +S ++ ++GR+E+A + M+ P+ Y S+++G+ A +
Sbjct: 329 EENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFN 388
Query: 566 MWHEIKRKIS 575
+ E+ K S
Sbjct: 389 IAQEMTEKSS 398
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 155/426 (36%), Gaps = 93/426 (21%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
+VF+E R L ++Y NA L C + AE ++ M GV + S
Sbjct: 164 RVFDEMARAGLAATT-----HVY--NAMLH-VCLKAGDAAQAEAIVTRMDAAGVTLDRFS 215
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ + LY KG+ + + M++ G V ++S I G K G ++ A++ +
Sbjct: 216 YNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMV 275
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
Q+ TY ++ G+ + GNV+ EA KL
Sbjct: 276 AA----QATPDNVTYTTLIDGYCRAGNVE-------EAVKLR------------------ 306
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
M A G G+ Y L+ C++ E +L+ ++ +Q D
Sbjct: 307 -------------GRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADH 353
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
+ LI A D SA + + M E +GL NH
Sbjct: 354 VTCNTLINAYCKRGDMTSACKVKKKMME--------------SGLQLNH----------- 388
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+ ++IH FCKA L+ AK +M+ F PN + L++G+
Sbjct: 389 -----------FTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKN 437
Query: 559 QYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVF 618
+VL + E+ + +G+ + + + + L + G D +V ++ Q +
Sbjct: 438 NADAVLAIPDELMK-------RGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLV 490
Query: 619 VDKWKY 624
D Y
Sbjct: 491 GDSLVY 496
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 109/265 (41%), Gaps = 31/265 (11%)
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ D M A G + L A + TA A ++ +++ +GL Y+A++ +
Sbjct: 130 VFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAATTHVYNAMLHVCL 189
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP-ELMAAFLDEVVEDPRVEVK 508
+ D A ++ M A + + SY T++ E M A + ++ +
Sbjct: 190 KAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCA--RDRMDKEGIRPD 247
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY-------------- 554
T WNS IH CK GR+++A + M+ Q P++ TY +LI+GY
Sbjct: 248 TVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRG 307
Query: 555 -VTAEQYFSVLMMWHEIKRKISTDGQ-------------KGIKFEHNLVDAFLYALVKGG 600
+ A + ++ I RK+ DG + ++ +H + + A K G
Sbjct: 308 RMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRG 367
Query: 601 FFDAVMQVVEKSQEMKVFVDKWKYK 625
+ +V +K E + ++ + YK
Sbjct: 368 DMTSACKVKKKMMESGLQLNHFTYK 392
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 81/415 (19%), Positives = 156/415 (37%), Gaps = 45/415 (10%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTV 145
+A + F + A L P +L+ L+ + +R F + + +
Sbjct: 126 DAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAATTHVYNAML 185
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECC 205
H L A AA A A+V M + + + CRK + A C
Sbjct: 186 HVCL----KAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAM------CA 235
Query: 206 RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
R +D+ + ++P+ N+++ G C V +A ++ M P+ ++ L
Sbjct: 236 RDRMDK--EGIRPDTVTWNSSIHGLCKE-GRVKEAAQLFTEMVAAQATPDNVTYTTLIDG 292
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
Y G E+ V+L M G + Y++++ + GN++ R LL G Q
Sbjct: 293 YCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHR--LLHEMDGRKVQ 350
Query: 326 SD----------FSKE----TYCEVVKGFLQNG------NVKGLANLIIEAQKLE----- 360
+D + K + C+V K +++G K L + +A++L+
Sbjct: 351 ADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEA 410
Query: 361 -----PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
+G + SV ++ +D +I DE+ G VY ++ C+
Sbjct: 411 FFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCR 470
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
+ +A ++ + S GL D Y L +T + +A + M + ++Y
Sbjct: 471 KGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKNQLY 525
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 140/334 (41%), Gaps = 56/334 (16%)
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
GL ++ +++ ++M G S +V ++SL+ TILL G NM +
Sbjct: 163 GLFQESIKVFTIMKSHGVSPSVVTFNSLL--------------TILLKRGRTNM-----A 203
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII--SACVNLGLSDKA 387
K+ Y E++ + G+ D + F I+ C+N G+ D
Sbjct: 204 KKVYDEMLSTY----------------------GVTPD-TFTFNILIRGFCMN-GMVDDG 239
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV--MDISSSGLQLDVGNYDALI 445
I ++++ GC + Y + C+ + A +V M S L +V Y LI
Sbjct: 240 FRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLI 299
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
++ + A ++F +M + +Y T++ GL E + E + L+ D
Sbjct: 300 RGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTF 359
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING------YVTAEQ 559
T +N+++H C AG L+DA + RM L+ +P+ TY +L+ Y AE
Sbjct: 360 SPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAED 419
Query: 560 YFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
L+ E K +S DG K + +N + +L
Sbjct: 420 LLDKLL---ERKILLSGDGCKPLVAAYNPIFKYL 450
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 137/355 (38%), Gaps = 42/355 (11%)
Query: 240 AEKVI-ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
A+KV E +S GV P+ +F L + + G+ + + + ++ FG +V Y++L+
Sbjct: 203 AKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLV 262
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNV-KGLANLIIE 355
G + G + A + G + D + TY +++G+ + K LA
Sbjct: 263 DGLCRAGKVTVAYNVV----KGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVF--- 315
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT------ 409
+++ G+ + +I +K IL+ + G G + P
Sbjct: 316 -EEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEG------TAGDGTFSPDTCTFNT 368
Query: 410 -LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ +C +A ++ +S +Q D Y AL+ + ++ A L + E +
Sbjct: 369 LMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERK 428
Query: 469 IY-------DLKGSYLTIMTGLMENHRPE----LMAAFLDEVVEDPRVEVKTHDWNSIIH 517
I L +Y I L E + + + +DP + ++I
Sbjct: 429 ILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDP------PSYKTLIM 482
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
CK G E L M+ F P+ +TY SLING + ++ L ++ R
Sbjct: 483 GHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLR 537
>gi|222623336|gb|EEE57468.1| hypothetical protein OsJ_07708 [Oryza sativa Japonica Group]
Length = 335
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 137/316 (43%), Gaps = 31/316 (9%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+++ M+ G+ PN ++G + G + L +++ E G V YSS++ GY+
Sbjct: 6 LLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYL 65
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLE 360
G + A + GN+ FS +++ + GNV+G +N+ I+ +
Sbjct: 66 LSGWTDHAYMLFVRVARQGNLVDH-FSCS---KLINDLCRVGNVQGASNVCKIMLEHNVV 121
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
P I + +IS G DKAH +M G S+ + VY + YCK R
Sbjct: 122 PDVISYSK-----LISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQ 176
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
EA QL + +++ G++ DV Y L++ + Q + ++ R S+L
Sbjct: 177 EACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERR---------SFL--- 224
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
L NH L + ++D ++E + +I CKA L +A+ M+
Sbjct: 225 --LRANHNKLLSS------MKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGL 276
Query: 541 EPNDQTYLSLINGYVT 556
P+ Y +LINGY +
Sbjct: 277 TPDAYAYTALINGYCS 292
>gi|414882131|tpg|DAA59262.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1604
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 137/355 (38%), Gaps = 45/355 (12%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ CN L D V E M LG+ P+ ++ L + +G ++K+
Sbjct: 1082 PDVKDCNRVLR-VLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAM 1140
Query: 278 LESLMNEFGFS--SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L M G V Y+ +I+G + G+LE A+ + G S TY
Sbjct: 1141 LLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELV-----EGMRLSKKASSFTYNP 1195
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G L G VK + +L +E +E GI+ +I + GL + A EM
Sbjct: 1196 LITGLLARGCVKKVYDLQLE---MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMR 1252
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A G + Y L YCK EA L D+ +GL V Y+ LI+ D +
Sbjct: 1253 AMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLE 1312
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTG-----------------LMENHRPELMA----- 493
A L +M E +Y +M G L + +P+ A
Sbjct: 1313 EARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRI 1372
Query: 494 -----------AF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
AF L EV+ + T +N +IH CK G L+DAK +M+
Sbjct: 1373 CAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMV 1427
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG---LQLDVGNY 441
D ++ +EM G + Y L ++ KE R + L+ ++ + G L DV Y
Sbjct: 1101 DDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDV-TY 1159
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT---IMTGLMENHRPELMAAF-LD 497
+ +I D + A L MR ++ K S T ++TGL+ R + + L
Sbjct: 1160 NVVITGLTRKGDLEEAAELVEGMRLSK----KASSFTYNPLITGLLA--RGCVKKVYDLQ 1213
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+E+ + +N++IH ++G +E A+ M + P+ TY SL+NGY A
Sbjct: 1214 LEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKA 1273
Query: 558 EQYFSVLMMWHEIKR 572
L+++ +++R
Sbjct: 1274 GNLKEALLLFGDLRR 1288
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 118/552 (21%), Positives = 212/552 (38%), Gaps = 120/552 (21%)
Query: 138 KLLDFQ----TVHTLLGSMRNANTAAPAFALVKC--MFKNRYFMPFELWGGFLVDICRKN 191
K+L+ Q T ++LL ++R+ + + +K + +N Y P + G +CR++
Sbjct: 195 KVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDG-----LCRQS 249
Query: 192 --SNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
+ V FL+ + + P++ + NA + G C + SV A+ M
Sbjct: 250 RLQDAVTFLR----------ETGGEEFGPSVVSFNALMSGFC-KMGSVDVAKSFFCMMIK 298
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G+ P+ S+ L + + G E+ +E + M G +V Y+ L +G+ LG +
Sbjct: 299 YGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISG 358
Query: 310 ASRTI-LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR 368
A + + + L G N + TY ++ G Q GN++ E+ KL+
Sbjct: 359 AWKVVQRMLLNGLNPDLV-----TYTILICGHCQMGNIE-------ESFKLK-------- 398
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
++M + G + + Y L + CK R EA L+ +
Sbjct: 399 -----------------------EKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHE 435
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ GL+ D+ Y + + A L+ +M RIY I++GL E
Sbjct: 436 MEVIGLKPDLLTY--------SRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGA 487
Query: 489 PELMAAFLDEVVEDPRVE---------------------VKTHD-------------WNS 514
+ D V + E V+++ +NS
Sbjct: 488 ISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNS 547
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+I+ FCK G+L +A + L + P TY +L+NGY S+ M HE++
Sbjct: 548 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEME--- 604
Query: 575 STDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYK---QAFMEN 631
K IK + L K G +Q+++ +F D+ Y Q+F +
Sbjct: 605 ----AKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKA 660
Query: 632 HKKLKVAKLRKR 643
H K +L +
Sbjct: 661 HDLQKAFQLHNQ 672
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 153/359 (42%), Gaps = 20/359 (5%)
Query: 198 LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNES 257
++++EE C + PN + C+A + G + ++S+A+ ++++ V
Sbjct: 457 IELYEEMCS-------KRIYPNSFVCSAIISGL-FEKGAISEAQMYFDSVTKSDVAEEII 508
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
+ + YA G + V + E G S +V ++SLI G+ K G L A + +
Sbjct: 509 LYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI 568
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGII 375
G + S TY ++ G+ + G++ + +++ +EA+ ++P+ I ++
Sbjct: 569 KVHGLVPTS----VTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTV-----VV 619
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
G ++ +L M A G Y ++++CK H +A QL + LQ
Sbjct: 620 KGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQ 679
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
Y+ LI + + A L +++ I K +Y TI+ + F
Sbjct: 680 PSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVF 739
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++VE EV D++++I+ CK + DAK M+ P+ L ++N +
Sbjct: 740 FHQMVERG-FEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAF 797
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 112/516 (21%), Positives = 198/516 (38%), Gaps = 68/516 (13%)
Query: 76 HKSLLTN--NTDEAWKSFKSLTANSLFPSKPVTNSLI----AHLSSLQDNHNLKRAFASV 129
+ SLL N +TD W + + A+ + P TN ++ S LQD R
Sbjct: 206 YNSLLYNLRHTDIMWDVYNEIKASGV-PQNEYTNPILIDGLCRQSRLQDAVTFLRETGGE 264
Query: 130 VYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMP-FELWGGFLVDIC 188
E P ++ F + + M + + A F CM +P + L +C
Sbjct: 265 ----EFGPSVVSFNALMSGFCKMGSVDVAKSFF----CMMIKYGLLPDVYSYNILLHGLC 316
Query: 189 RKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGC-CYGLQSVSDAEKVIETM 247
S EE D ++P+I N G GL +S A KV++ M
Sbjct: 317 VAGS--------MEEALEFTNDMENHGVEPDIVTYNILANGFRILGL--ISGAWKVVQRM 366
Query: 248 SVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL 307
+ G+ P+ ++ L + G E+ +L+ M G +V Y+ L+S K G +
Sbjct: 367 LLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRI 426
Query: 308 ESAS-----------RTILLCLGGGNMEQSDFSKETYCE------------VVKGFLQNG 344
+ A + LL G +E++ E C ++ G + G
Sbjct: 427 DEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKG 486
Query: 345 NVKGLANLIIE-------AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+ A + + A+++ I++D G N+G + +++ + E
Sbjct: 487 AISE-AQMYFDSVTKSDVAEEIILYNIMIDGYAKLG------NIGEAVRSYKQIIEK--- 536
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G S + + + +CK+ + AEA +L+ I GL Y L+ D S
Sbjct: 537 GISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSM 596
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
F + +M I + +Y ++ GL + R L + + +N++I
Sbjct: 597 FDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQI-TYNTVIQ 655
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+FCKA L+ A + +M+ +P+ TY LING
Sbjct: 656 SFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLING 691
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 122/265 (46%), Gaps = 11/265 (4%)
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
SR +G +++S F TY ++ + G+++ +L + ++ +G D
Sbjct: 40 SRKFFKDMGAAGIKRSVF---TYNIMIDYLCKEGDLEMARSLFTQ---MKEAGFTPDIVT 93
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
+I LGL D+ I ++M C + Y + +CK R +A + + ++
Sbjct: 94 YNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMK 153
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
++GL+ +V Y I+A Q A F DMR + + +Y +++ N +
Sbjct: 154 ANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA---NCKAG 210
Query: 491 LMAAFLDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
+A L V E + +K + + +++ C+ GR+++A+ R M+ PN +TY
Sbjct: 211 NLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYT 270
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRK 573
+L++G++ A++ + E+K K
Sbjct: 271 ALVHGFIKAKEMEYAKDILKEMKEK 295
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 152/360 (42%), Gaps = 23/360 (6%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAE---KVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
P +CNA L + L V + K + M G++ + ++ + +G E
Sbjct: 19 PKPRSCNALL----HRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEM 74
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--T 332
L + M E GF+ +V Y+SLI G+ KLG L+ +C+ M+ +D + T
Sbjct: 75 ARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDEC-----ICI-FEQMKDADCDPDVIT 128
Query: 333 YCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
Y ++ F + + + E A L+P+ VV S I A G+ +A
Sbjct: 129 YNALINCFCKFERMPKAFEFLHEMKANGLKPN--VVTYST---FIDAFCKEGMLQEAIKF 183
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+M + Y + A CK AEA +LV +I +G++L+V Y AL++
Sbjct: 184 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 243
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ A +FR M A + + +Y ++ G ++ E L E+ E ++
Sbjct: 244 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC-IKPDLL 302
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+ +I+ C RLE+AK + + N Y +L++ Y + Q L + E+
Sbjct: 303 LYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 362
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 121/313 (38%), Gaps = 65/313 (20%)
Query: 176 PFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ 235
P E L+D K N LK+ EE + + K N+ A L+G C
Sbjct: 194 PNEFTYTSLIDANCKAGNLAEALKLVEEILQAGI-------KLNVVTYTALLDGLCEE-G 245
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYA-----------LKGLQEKIVELESLM-- 282
+ +AE+V M GV PN+ ++ L + + LK ++EK ++ + L+
Sbjct: 246 RMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYG 305
Query: 283 ----------------------NEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCL 318
E G ++ V Y++L+ Y K G A + +L L
Sbjct: 306 TILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDL 365
Query: 319 GGGNMEQSDF-----------------SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
G + + F K Y ++ G +++GN++ NL ++
Sbjct: 366 VDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNL---RDRMIE 422
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
G+ +D +I + G KA ++LDEM G VY+ +K Y + E
Sbjct: 423 IGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDE 482
Query: 422 ATQLVMDISSSGL 434
A +L +++ G+
Sbjct: 483 ALELQNEMAKRGM 495
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 162/403 (40%), Gaps = 55/403 (13%)
Query: 215 FMKPNIYACNAALEGCC-YGLQSVSDAEKVIETM-SVLGVRPNESSFGFLAYLYALKGLQ 272
++P++ N ++G C G Q + ++E M S PN ++ L Y +
Sbjct: 375 LVEPDVITYNTLIDGLCKVGRQE--EGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMI 432
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
E EL MN+ G +V ++L+ G K G + A G G + T
Sbjct: 433 EAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNA----VT 488
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y +++ F N++ L E + +G D V + +IS G D+A +L
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEMLE---AGCSPDAIVYYTLISGLSQAGKLDRASFVLS 545
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M G S + + + +C++++ EA +++ ++ ++G++ D Y+ LI +
Sbjct: 546 KMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTG 605
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
DF +A L + M + +G T++T +
Sbjct: 606 DFSTAHRLMKKMVK------EGLVPTVVT------------------------------Y 629
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFL-QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
++IHA+C G L++A + R M + PN Y LIN Q L + ++K
Sbjct: 630 GALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMK 689
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
KG+K N +A L + + +++++ E
Sbjct: 690 -------VKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTE 725
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 9/213 (4%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+IS G +D+A +L + G + L A + L+ ++
Sbjct: 276 LISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMD 335
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMR--EARIYDLKG---SYLTIMTGLMENHR 488
+Q +V + LI + A +F M E+ + ++ +Y T++ GL + R
Sbjct: 336 IQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGR 395
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
E ++ + PR T +N +I +CKA +E A+ +M PN T
Sbjct: 396 QEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLN 455
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRKISTDGQKG 581
+L++G + + ++E++ K G KG
Sbjct: 456 TLVDGMCKHGRINGAVEFFNEMQGK----GLKG 484
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 137/339 (40%), Gaps = 10/339 (2%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF-GFLAYLYALKGLQEK 274
+KP+I N+ ++G C L + DA ++I + G P++ S+ + +L K +++
Sbjct: 297 IKPDIVTYNSLIKGYC-DLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQV 355
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+E ++ + V Y++LI K G+ + A L L + K Y
Sbjct: 356 KCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDA----LAFLKEAEDKGFHIDKVGYS 411
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+V F Q G + +L+I+ + VV + I+ LG D+A +L +M
Sbjct: 412 AIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYT---AIVDGFCRLGRIDEAKKMLQQM 468
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
GC Y L C ++ EA +++ + Y ++
Sbjct: 469 YKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKL 528
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A L R+M E + ++ L +N + +L+E + + + ++ +
Sbjct: 529 SEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECL-NKGCAINVVNFTT 587
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+IH FC+ G +E A L M P+ TY +L +
Sbjct: 588 VIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDA 626
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 124/306 (40%), Gaps = 7/306 (2%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ +A +V+ M GV PN S Y+ EK + M G +V Y+S
Sbjct: 247 LRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNS 306
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
LI GY L +E A L + G + K +Y V+ + ++ + L+
Sbjct: 307 LIKGYCDLNRIEDA----LELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLM--E 360
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+ ++ S ++ D+ +I G +D A + L E G + Y + ++C++
Sbjct: 361 KMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQK 420
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R EA LV+D+ S DV Y A+++ A + + M + SY
Sbjct: 421 GRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSY 480
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
++ GL + + L A + V E+ + ++H F + G+L +A R M+
Sbjct: 481 TALLNGLCHSGK-SLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMV 539
Query: 537 FLQFEP 542
F P
Sbjct: 540 EKGFFP 545
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 125/274 (45%), Gaps = 13/274 (4%)
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN 343
++ +S + Y +L+ K + A R + L G + S E + V+ + +
Sbjct: 189 QWRYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRG----IELSPEAFGCVMVSYSRA 244
Query: 344 GNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
G ++ ++ QK +EP+ + + ++ + ++ C +KA L+ M G
Sbjct: 245 GKLRNALRVLTLMQKAGVEPNLSICNTTI-YVLVKGCK----LEKALRFLERMQVTGIKP 299
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ Y +K YC +R +A +L+ + S G D +Y ++ + + L
Sbjct: 300 DIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLM 359
Query: 462 RDM-REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFC 520
M +++ + + +Y T++ L ++ + AFL E ED + +++I+H+FC
Sbjct: 360 EKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEA-EDKGFHIDKVGYSAIVHSFC 418
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ GR+++AK + M P+ TY ++++G+
Sbjct: 419 QKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGF 452
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 111/276 (40%), Gaps = 13/276 (4%)
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
LM G + ++ Y + G L +A R + L G T +VKG
Sbjct: 221 LMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGC 280
Query: 341 LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
++ L ++++ +GI D +I +L + A ++ + + GC
Sbjct: 281 KLEKALRFL-------ERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCP 333
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMD--ISSSGLQLDVGNYDALIEASITSQDFQSAF 458
Y + CKE + E + +M+ + S L D Y+ LI A
Sbjct: 334 PDKVSYYTVMGFLCKEKKI-EQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDAL 392
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+ ++ + + K Y I+ + R E + +D +V T + +I+
Sbjct: 393 AFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVT--YTAIVD 450
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
FC+ GR+++AK+ L++M +PN +Y +L+NG
Sbjct: 451 GFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNG 486
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 125/319 (39%), Gaps = 46/319 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ A ++G C L + +A+K+++ M G +PN S+ L G + E
Sbjct: 440 PDVVTYTAIVDGFCR-LGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEARE 498
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ ++ E ++ + Y ++ G+ + G L E D ++E V
Sbjct: 499 MINVSEEHWWTPNAITYGVVMHGFRREGKLS---------------EACDLTREM---VE 540
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
KGF P+ + + I S C N + + A L+E
Sbjct: 541 KGFF-------------------PTPV----EINLLIQSLCQNQKVVE-AKKYLEECLNK 576
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC++ + + + +C+ A ++ D+ S D Y AL +A A
Sbjct: 577 GCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEA 636
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
L M + ++ +++ + R + M LD +V+ R +T +N +I
Sbjct: 637 AELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVK--RKPFRT-IYNHVIE 693
Query: 518 AFCKAGRLEDAKRTLRRMI 536
C G LE+A++ L +++
Sbjct: 694 KLCDFGNLEEAEKLLGKVL 712
>gi|449443502|ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
gi|449492820|ref|XP_004159111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
Length = 704
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 130/317 (41%), Gaps = 15/317 (4%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AEK+ E M GV+P+ +F + L L K VE M F + V YS++I
Sbjct: 198 AEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKMPSFDCNPDDVTYSTMID 257
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
Y + GN++ A E T+ ++K GN G N+ E + +
Sbjct: 258 AYGRAGNVDMA----FSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAI 313
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
GI + + ++ A + +I EM G S Y L+AY +
Sbjct: 314 ---GIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYG 370
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK----GS 475
+A + ++ GLQL+V Y+ L+ A +F+DM+ + S
Sbjct: 371 EDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSS 430
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
+TI + + E M + E DP + V T S+I + KA R++D RT ++
Sbjct: 431 MITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLT----SLIQCYGKAKRVDDVVRTFNQL 486
Query: 536 IFLQFEPNDQTYLSLIN 552
I L P+D+ L+N
Sbjct: 487 IELGLTPDDRFCGCLLN 503
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 177/438 (40%), Gaps = 82/438 (18%)
Query: 205 CRIALDENLDF--------MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
C+ + + LDF + I +CN L+G + + A +++ + G PN
Sbjct: 229 CKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG--LSVDQIEVASRLLSLVLDCGPAPNV 286
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA------ 310
+F L + +G ++ +L +M + G ++ YS+LI GY K G L
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 311 -------------SRTILLCLGGGNMEQSDFSKE------------TYCEVVKGFLQNGN 345
S TI + + G++ + + TY ++KG Q+G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 346 VK---GLANLIIEAQKLEPSGIVVDRSV-----------GFGIISACVNLG--------- 382
+ G+ I++ + +EPS + + GF + + +G
Sbjct: 407 IYEAFGMYGQILK-RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 383 -----LSDKA---HSILDEMNACGCSVGLGVYV--PTLKAYCKEHRTAEATQLVMDISSS 432
LS + H++ + G S+ L V V + +C+ +R EA ++ +
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G++ DV + ++ SI + A LF M + + +Y T++ ++ +P +
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
D +++ ++ N +IH K R+EDA + +I + EP+ TY ++I
Sbjct: 586 LQLFD-LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 553 GYVT------AEQYFSVL 564
GY + AE+ F +L
Sbjct: 645 GYCSLRRLDEAERIFELL 662
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 130/327 (39%), Gaps = 30/327 (9%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE--KIVELESLMNEF---GFSSQM 291
++ A V + M G+ PN + Y +KGL + +I E + + G +
Sbjct: 372 LATASVVYKRMLCQGISPN-----VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE--VVKGFLQNGNVKGL 349
V YSSLI G+ K GNL S G D K Y V+ G L +G K
Sbjct: 427 VTYSSLIDGFCKCGNLRS-----------GFALYEDMIKMGYPPDVVIYGVLVDGLSK-- 473
Query: 350 ANLIIEAQ----KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
L++ A K+ I ++ V +I L D+A + M G +
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
+ ++ E R EA L + GL+ D Y LI+A LF M+
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+I ++ L + HR E + F + ++E ++E +N++I +C RL
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG-KMEPDIVTYNTMICGYCSLRRL 652
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++A+R + F PN T LI+
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIH 679
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 135/338 (39%), Gaps = 47/338 (13%)
Query: 251 GVRPNE-SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G+ P+ S+ GF+ KG K ++ L+ E GF +V + ++ G + + +E
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEV 269
Query: 310 ASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPS----- 362
ASR + L L G T+C ++ GF + G + +L ++E + +EP
Sbjct: 270 ASRLLSLVLDCGPAPNV----VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 363 -------------------------GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G+ +D V I V G A + M
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G S + Y +K C++ R EA + I G++ + Y +LI+ + +S
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMEN----HRPELMAAFLDEVVEDPRVEVKTHDWN 513
F+L+ DM + Y ++ GL + H L + + R+ V +N
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI---RLNVVV--FN 500
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
S+I +C+ R ++A + R M +P+ T+ +++
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 138/333 (41%), Gaps = 17/333 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++ N+ N+ ++G C L +A KV M + G++P+ ++F + + ++G E+
Sbjct: 492 IRLNVVVFNSLIDGWCR-LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L M + G + Y +LI + K +++ L L N +D + C
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCK--HMKPTIGLQLFDLMQRNKISADIA---VCN 605
Query: 336 VVKGFL----QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
VV L + + N +IE K+EP + + +I +L D+A I
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIEG-KMEPDIVTYNT-----MICGYCSLRRLDEAERIF 659
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+ + + CK + A ++ ++ G + + Y L++ S
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
D + +F LF +M+E I SY I+ GL + R + + + D ++
Sbjct: 720 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-DAKLLPDVVA 778
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
+ +I +CK GRL +A M+ +P+D
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 137/318 (43%), Gaps = 20/318 (6%)
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN 343
+ G +V +++LI+G K+G A + G Q D TY ++ G +
Sbjct: 156 KLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGC--QPDVY--TYNTIINGLCKI 211
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
G A L+ +K+E +G + +I + L ++A I M A G S +
Sbjct: 212 GETAAAAGLL---KKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDI 268
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y ++ CK R EA+ L+ +++S + D+ ++ L++ A + +
Sbjct: 269 FTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKT 328
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M E + +Y ++M G + A L V+ + +N +I+ +CKA
Sbjct: 329 MTEMGVEPNVVTYSSLMYGY-SLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAK 387
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIK 583
R+++A + MI PN+ +Y +LI+G+ + L ++ R + T+G
Sbjct: 388 RIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGK----LREAQDLFRNMCTNG----- 438
Query: 584 FEHNLVDAFLYALVKGGF 601
NL D F Y+++ GF
Sbjct: 439 ---NLPDLFTYSILLDGF 453
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 147/345 (42%), Gaps = 25/345 (7%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++Y N + G C + + A +++ M G +PN ++ L L + +
Sbjct: 195 QPDVYTYNTIINGLC-KIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEAL 253
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
++ S M G S + Y+SLI G K + AS + M + + T+
Sbjct: 254 DIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALL------NEMTSLNIMPDIVTFN 307
Query: 335 EVVKGFLQNGNVK---GLANLIIEAQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSI 390
+V F + G V G+ + E +EP+ + + G+ + + V +A +
Sbjct: 308 VLVDTFCKEGKVSEALGVLKTMTE-MGVEPNVVTYSSLMYGYSLWTDVV------EARKL 360
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
M GC + Y + YCK R EA QL ++ GL + +Y+ LI
Sbjct: 361 FHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQ 420
Query: 451 SQDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVK 508
+ A LFR+M + DL +Y ++ G + + L AF L ++ ++
Sbjct: 421 LGKLREAQDLFRNMCTNGNLPDLF-TYSILLDGFCK--QGYLGKAFRLFRAMQSTYLKPN 477
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ ++HA CK+G +DA++ + +P+ Q Y ++ING
Sbjct: 478 LVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIING 522
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 112/286 (39%), Gaps = 47/286 (16%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL--------- 268
P+I N ++ C VS+A V++TM+ +GV PN ++ L Y Y+L
Sbjct: 301 PDIVTFNVLVDTFCKE-GKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARK 359
Query: 269 -------KGLQEKIVELESLMNEF-------------------GFSSQMVFYSSLISGYV 302
KG + I L+N + G + V Y++LI G+
Sbjct: 360 LFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFC 419
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLE 360
+LG L A GN+ TY ++ GF + G + L +++ L+
Sbjct: 420 QLGKLREAQDLFRNMCTNGNLP----DLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLK 475
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
P+ ++ ++ A G A + E+ G + +Y + CKE
Sbjct: 476 PNLVMYTI-----LVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLD 530
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
EA + ++ + G D +Y+ +I + +D A L +MR+
Sbjct: 531 EALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRD 576
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 88/227 (38%), Gaps = 18/227 (7%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPNI++ N + G C + + +A ++ M G+ PN S+ L + + G +
Sbjct: 370 KPNIFSYNILINGYCKA-KRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQ 428
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET---Y 333
+L M G + YS L+ G+ K G L A R QS + K Y
Sbjct: 429 DLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLF-------RAMQSTYLKPNLVMY 481
Query: 334 CEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+V ++GN K L E Q L+P + II+ GL D+A
Sbjct: 482 TILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTT-----IINGLCKEGLLDEALEAF 536
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
M A GC Y ++ + + A LV ++ G DV
Sbjct: 537 RNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 2/181 (1%)
Query: 374 IISACVNLG-LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
++SA V +G D S+ +M G S + + +C+ R ++ +
Sbjct: 98 LLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKL 157
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GLQ + + LI +F A LF DM +Y TI+ GL +
Sbjct: 158 GLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAA 217
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
A L + +E+ + ++++I + C+ + +A M P+ TY SLI
Sbjct: 218 AGLLKK-MEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQ 276
Query: 553 G 553
G
Sbjct: 277 G 277
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 140/334 (41%), Gaps = 56/334 (16%)
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
GL ++ +++ ++M G S +V ++SL+ TILL G NM +
Sbjct: 163 GLFQESIKVFTIMKSHGVSPSVVTFNSLL--------------TILLKRGRTNM-----A 203
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII--SACVNLGLSDKA 387
K+ Y E++ + G+ D + F I+ C+N G+ D
Sbjct: 204 KKVYDEMLSTY----------------------GVTPD-TFTFNILIRGFCMN-GMVDDG 239
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV--MDISSSGLQLDVGNYDALI 445
I ++++ GC + Y + C+ + A +V M S L +V Y LI
Sbjct: 240 FRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLI 299
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
++ + A ++F +M + +Y T++ GL E + E + L+ D
Sbjct: 300 RGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTF 359
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING------YVTAEQ 559
T +N+++H C AG L+DA + RM L+ +P+ TY +L+ Y AE
Sbjct: 360 SPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAED 419
Query: 560 YFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
L+ E K +S DG K + +N + +L
Sbjct: 420 LLDKLL---ERKILLSGDGCKPLVAAYNPIFKYL 450
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 130/336 (38%), Gaps = 42/336 (12%)
Query: 240 AEKVI-ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
A+KV E +S GV P+ +F L + + G+ + + + ++ FG +V Y++L+
Sbjct: 203 AKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLV 262
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNV-KGLANLIIE 355
G + G + A + G + D + TY +++G+ + K LA
Sbjct: 263 DGLCRAGKVTVAYNVV----KGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVF--- 315
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT------ 409
+++ G+ + +I +K IL+ + G G + P
Sbjct: 316 -EEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEG------TAGDGTFSPDTCTFNT 368
Query: 410 -LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ +C +A ++ +S +Q D Y AL+ + ++ A L + E +
Sbjct: 369 LMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERK 428
Query: 469 IY-------DLKGSYLTIMTGLMENHRPE----LMAAFLDEVVEDPRVEVKTHDWNSIIH 517
I L +Y I L E + + + +DP + ++I
Sbjct: 429 ILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDP------PSYKTLIM 482
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
CK G E L M+ F P+ +TY SLING
Sbjct: 483 GHCKEGTFESGYELLVLMLRKDFXPDFETYESLING 518
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 169/400 (42%), Gaps = 24/400 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ N ++ C +++ AE V+ M+ G +P+ ++ + + YA G ++
Sbjct: 296 VKPDVVTYNLIIDALCKA-RAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEA 354
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++ M G +V +S ++ K G + A+ G+ + D +YC
Sbjct: 355 AKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGH--KPDIV--SYCT 410
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ G A++I ++ +GI D V +I A G+ D A I EM
Sbjct: 411 LLHGYASEG---WFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQ 467
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G S + Y + A+ + R +A + + + G+Q + Y ++I+
Sbjct: 468 QQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLV 527
Query: 456 SAFSLFRDMREARIYDLKGSYL-TIMTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDWN 513
A L +M I + +++ L ++ R D V + R +V T +
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVIT--FT 585
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
S+I +C G+++ A + L M + E + TY +L++GY + L ++ E++R
Sbjct: 586 SLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQR- 644
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
KG+K + Y ++ G F A V + +
Sbjct: 645 ------KGVK-----PNTVTYGIMLAGLFRAGRTVAARKK 673
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 170/413 (41%), Gaps = 25/413 (6%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG--VRPNESSFGFLAYLYALKGLQEKI 275
PN+++ + L+G C S A + + M+ G PN ++ + + + +G K
Sbjct: 226 PNVFSYSIILKGLCDNSMS-QRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKA 284
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L M G +V Y+ +I K ++ A ++L N Q D TY
Sbjct: 285 CSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAE--LVLRQMTTNGAQPD--TVTYNC 340
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ G +K A + +K++ G++ + + +++ G S +A I D M
Sbjct: 341 MIHGYATLGRLKEAAKMF---RKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMT 397
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A G + Y L Y E A+ L + S+G+ D ++ LI A
Sbjct: 398 AKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVD 457
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNS 514
A +F +M++ + +Y T+++ R + M F V ++ T ++S
Sbjct: 458 DAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG--IQPNTAVYHS 515
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL-SLINGYVTAEQYFSVLMMWHEIKRK 573
II FC G L AK + MI D + S+IN + +M H+I
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGR----VMDAHDIFDL 571
Query: 574 ISTDGQKG--IKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
++ G++ I F +L+D Y LV G D ++++ + + V D Y
Sbjct: 572 VTDIGERPDVITFT-SLIDG--YCLV--GKMDKAFKILDAMEVVGVETDIVTY 619
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 148/403 (36%), Gaps = 76/403 (18%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS------------------- 258
PNI CN+ L C +S +A ++ ++M+ G +P+ S
Sbjct: 368 PNIVICNSFLASLCKHGRS-KEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIG 426
Query: 259 ----------------FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
F L + YA +G+ + + + + M + G S +V YS++IS +
Sbjct: 427 LFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFS 486
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA------ 356
++G L A + G + Y +++GF +G + L+ E
Sbjct: 487 RMGRLTDAMEKFNQMVARGIQPNT----AVYHSIIQGFCMHGGLVKAKELVSEMINKGIP 542
Query: 357 -----------QKLEPSGIVVDRSVGFGIISA-----------------CVNLGLSDKAH 388
L G V+D F +++ C+ +G DKA
Sbjct: 543 RPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCL-VGKMDKAF 601
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
ILD M G + Y L Y K R + L ++ G++ + Y ++
Sbjct: 602 KILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGL 661
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ +A F +M E+ Y I+ GL N+ + A L + + V+
Sbjct: 662 FRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCAD-EAIILFQKLGTMNVKFS 720
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
N++I+A K R E+AK + PN+ TY +I
Sbjct: 721 ITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 137/333 (41%), Gaps = 16/333 (4%)
Query: 227 LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG 286
L+ CY ++ ++ MS LG PN S+ + + ++ ++L +M + G
Sbjct: 199 LKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEG 258
Query: 287 --FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQ 342
S +V Y+++I G+ K G A C M + + TY ++ L
Sbjct: 259 GACSPNVVAYNTVIHGFFKEGETGKA------CSLFHEMTRQGVKPDVVTYNLIIDA-LC 311
Query: 343 NGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
A L++ +++ +G D +I LG +A + +M + G
Sbjct: 312 KARAMDKAELVL--RQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPN 369
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+ + L + CK R+ EA ++ +++ G + D+ +Y L+ + F LF
Sbjct: 370 IVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFN 429
Query: 463 DMREARIY-DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
M+ I D + + I + M F + + +V T ++++I AF +
Sbjct: 430 SMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVT--YSTVISAFSR 487
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
GRL DA +M+ +PN Y S+I G+
Sbjct: 488 MGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGF 520
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 136/322 (42%), Gaps = 26/322 (8%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+I N+ + C V DA + + ++ +G RP+ +F L Y L G +K
Sbjct: 543 RPDIVFFNSVINSLCKD-GRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAF 601
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
++ M G + +V YS+L+ GY K G + M++ T V
Sbjct: 602 KILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFR------EMQRKGVKPNT---V 652
Query: 337 VKGFLQNGNVKGLANLIIEAQK----LEPSGIVVDRSVGFGII--SACVNLGLSDKAHSI 390
G + G + A + A+K + SG V S+ +GII C N +D+A +
Sbjct: 653 TYGIMLAGLFR--AGRTVAARKKFHEMIESGTTVTVSI-YGIILGGLCRN-NCADEAIIL 708
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
++ + + + A K R EA +L IS+SGL + Y +I +
Sbjct: 709 FQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLK 768
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYL--TIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ A ++F M ++ I + GS L I+ L+E +L + V+ R+ ++
Sbjct: 769 DGAVEDANNMFSSMEKSGI--VPGSRLLNRIIRMLLEKGEIAKAGNYLSK-VDGKRILLE 825
Query: 509 THDWNSIIHAFCKAGRL-EDAK 529
+ ++ F + G+ ED K
Sbjct: 826 ASTTSLMLSLFSRKGKYHEDMK 847
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 15/212 (7%)
Query: 396 ACGCSVGLGVYVPT----LKAYCKEHRTAEATQLVMD-ISSSGLQLDVGNYDALIEASIT 450
C GL ++ T LK C +RT EA +++ +S G +V +Y +++
Sbjct: 181 GCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCD 240
Query: 451 SQDFQSAFSLFRDMRE--ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ Q A LF+ M + +Y T++ G + + E+ V+
Sbjct: 241 NSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQG-VKPD 299
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+N II A CKA ++ A+ LR+M +P+ TY +I+GY T + M+
Sbjct: 300 VVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFR 359
Query: 569 EIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
++K +G+ + ++FL +L K G
Sbjct: 360 KMK-------SRGLIPNIVICNSFLASLCKHG 384
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 107/510 (20%), Positives = 206/510 (40%), Gaps = 47/510 (9%)
Query: 55 TQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLS 114
T ++T S NLH + +A SF L P V N L+ L
Sbjct: 27 TTNISPSSITNGGFCSNYNNLH------SVADAVASFNQLLGIRPLPPVVVFNKLLGSL- 79
Query: 115 SLQDNHNLKRAFASVVYVIEKNPKLLDFQ----TVHTLLGSMRNANTAAP--AFALVKCM 168
+K+ S V + K L + + T+ L+ + ++N AF+ + M
Sbjct: 80 -------VKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKM 132
Query: 169 FKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALE 228
FK +G L +C K + + +K+F+E ++ P++ ++
Sbjct: 133 FKLGLQPTHVTFGTLLNGLCSK-AKIIDAVKLFDEIGKMGF-------APSLITYTTIIK 184
Query: 229 GCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFS 288
G C + ++A ++++ M G +P+ ++ + + + S M + G
Sbjct: 185 GLC-KIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIP 243
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKG 348
+V YSS++ G+ LG L A+ +G M + T+ +V G + G
Sbjct: 244 PNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNT----VTFTILVDGLCKEG---- 295
Query: 349 LANLIIEAQK----LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
+I+EA++ + +G+ D ++ D+A + D M G + +
Sbjct: 296 ---MILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVR 352
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
VY + +CK R EA L+ ++ L D Y L++ + Q A LF++M
Sbjct: 353 VYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEM 412
Query: 465 REARIYDLKGSYLTIMTGLMEN-HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
+ +Y ++ GL ++ H E A L + +++ ++E +N +I C G
Sbjct: 413 CSYGLLPDSITYSILLDGLCKHGHLDE--AFRLLKAMQESKIEPHICIYNILIQGMCNFG 470
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+LE A+ + +P+ TY +I+G
Sbjct: 471 KLEAARELFSNLFVKGIQPSVVTYTVMISG 500
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 169/423 (39%), Gaps = 71/423 (16%)
Query: 207 IALDENLDF--MKPNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLA 263
I+L + +D ++PN+Y + C+ + V A + M LG++P +FG L
Sbjct: 89 ISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTL- 147
Query: 264 YLYALKGL--QEKIVELESLMNEFG---FSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
L GL + KI++ L +E G F+ ++ Y+++I G K+G+ +A + +
Sbjct: 148 ----LNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLL---- 199
Query: 319 GGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIE-AQKLEPSGIVVDRSVGFGII 375
ME+ + Y V+ ++ E + P +V S+ G
Sbjct: 200 --KKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGF- 256
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
NLG ++A S+ +M + + CKE EA ++ ++ +G++
Sbjct: 257 ---CNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVE 313
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREA-RIYDLKGSYLTIMTGLMENHRPELMAA 494
D Y AL++ + L M EA +++D IM G
Sbjct: 314 PDAYTYSALMDG----------YCLQSQMDEAQKLFD-------IMVG----------KG 346
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
F P V V +N +I+ CK+ RL +AK L M P+ TY +L+ G+
Sbjct: 347 F------APSVRV----YNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGF 396
Query: 555 VTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
A + ++ E+ G+ + L L K G D ++++ QE
Sbjct: 397 CQAGRPQVAQKLFKEM-------CSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQE 449
Query: 615 MKV 617
K+
Sbjct: 450 SKI 452
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 117/286 (40%), Gaps = 14/286 (4%)
Query: 218 PNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
PN ++G C G+ + +A +V E M+ GV P+ ++ L Y L+ ++
Sbjct: 279 PNTVTFTILVDGLCKEGM--ILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQ 336
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
+L +M GF+ + Y+ LI+G+ K L A +T+L M D + +T Y
Sbjct: 337 KLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEA-KTLL-----SEMYDRDLTPDTVTYS 390
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+++GF Q G + L E + G++ D ++ G D+A +L M
Sbjct: 391 TLMQGFCQAGRPQVAQKLFKE---MCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAM 447
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ +Y ++ C + A +L ++ G+Q V Y +I +
Sbjct: 448 QESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLS 507
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
A +FR M +Y + G + N P ++E+V
Sbjct: 508 NEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMV 553
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 102/235 (43%), Gaps = 20/235 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N + G C + +++A+ ++ M + P+ ++ L + G + +
Sbjct: 349 PSVRVYNILINGHCKS-RRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQK 407
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCE 335
L M +G + YS L+ G K G+L+ A R + M++S Y
Sbjct: 408 LFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLL------KAMQESKIEPHICIYNI 461
Query: 336 VVKGFLQNGNVKG----LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+++G G ++ +NL ++ ++PS VV +V +IS + GLS++A +
Sbjct: 462 LIQGMCNFGKLEAARELFSNLFVKG--IQPS--VVTYTV---MISGLLKEGLSNEACEMF 514
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
+M GC Y ++ + + + A +L+ ++ G D + L++
Sbjct: 515 RKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 146/346 (42%), Gaps = 18/346 (5%)
Query: 216 MKPNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--- 271
MK N A G L + D +K + + V PN+ Y + GL
Sbjct: 154 MKSRGITSNGATHGVILSALCARRDLDKAVSYFN--SVSPNKCEPTLFTYTVLVDGLCKA 211
Query: 272 --QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
E+ ++ M G+ ++ YSSLI G K G ++ A + + L + G +
Sbjct: 212 HKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTA--- 268
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
Y +V G + G ++ I E ++ V S I++ + +G +KA +
Sbjct: 269 -VAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSF---IVTGYIGMGKVEKAFA 324
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+++EM C+ Y ++A R EA ++ + G + D+ Y +I+
Sbjct: 325 VMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFC 384
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
+A + R M +A + + Y IM G +++ R E +++D + T
Sbjct: 385 KEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDG-ILPST 443
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFL--QFEPNDQTYLSLING 553
+N++I+A CK ++++A LR M + EP+ TY +I+G
Sbjct: 444 VTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHG 489
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 156/400 (39%), Gaps = 66/400 (16%)
Query: 204 CCRIALDENLDFM--------KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
C R LD+ + + +P ++ ++G C V A V E M G +P+
Sbjct: 174 CARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKA-HKVERACDVFEEMIRKGYKPD 232
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
++ L + G ++ +L LM G V Y+S+++G K G ++ A +TI
Sbjct: 233 IIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQ 292
Query: 316 LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII 375
+ D TY +V G++ G V+ ++ E + + + ++ I
Sbjct: 293 EMRRRRLRPRVD----TYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTM---FI 345
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ----------- 424
A ++G ++A + + M GC + Y + +CKE A AT
Sbjct: 346 EALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVK 405
Query: 425 -------LVMD-----------------ISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
++MD I G+ Y+ +I A + A L
Sbjct: 406 PNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALEL 465
Query: 461 FRDMREARIYDLKGSYLT---IMTGL----MENHRPELMAAFLDE-VVEDPRVEVKTHDW 512
R+M+ R +L+ S +T I+ GL ME +L+A +D V+ D +
Sbjct: 466 LREMQR-RKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPD------CFTY 518
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
S+I AG++ A L M+ P+D TY +L+
Sbjct: 519 TSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQ 558
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 140/363 (38%), Gaps = 15/363 (4%)
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT 313
PN SSF L +A + E + L M G +S + ++S +L+ A +
Sbjct: 126 PNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAV-S 184
Query: 314 ILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG 373
+ E + F TY +V G + V+ ++ E + G D
Sbjct: 185 YFNSVSPNKCEPTLF---TYTVLVDGLCKAHKVERACDVFEEMIR---KGYKPDIIAYSS 238
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I G D+A ++D M A G Y + CK R EA + + ++
Sbjct: 239 LIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRR 298
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
L+ V Y ++ I + AF++ +M + SY + L R E
Sbjct: 299 LRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAE 358
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ +VE + H + II FCK G + A LR M +PN Y +++G
Sbjct: 359 KVFETMVEKG-CKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDG 417
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
+V + + L E+ ++I DG +N V + AL K D ++++ + Q
Sbjct: 418 FVKSSRLEEAL----ELYQRILKDGILPSTVTYNTV---INALCKLKKMDEALELLREMQ 470
Query: 614 EMK 616
K
Sbjct: 471 RRK 473
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 14/237 (5%)
Query: 232 YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQM 291
Y + +AEKV ETM G +P+ ++G + + +G + LM++
Sbjct: 349 YSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNR 408
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLAN 351
Y+ ++ G+VK LE A L G + S TY V+ + +
Sbjct: 409 YIYTMIMDGFVKSSRLEEALELYQRILKDGILP----STVTYNTVINALCKLKKMDEALE 464
Query: 352 LIIEAQK----LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
L+ E Q+ LEPS +V S+ II +G+ ++A +L EM G Y
Sbjct: 465 LLREMQRRKEELEPS--IVTYSM---IIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYT 519
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
++ + + A +L+ ++ +G+ D Y L++ + D +A+ L ++M
Sbjct: 520 SLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQI-LCRSDVDAAWDLLQEM 575
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 155/367 (42%), Gaps = 9/367 (2%)
Query: 210 DENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALK 269
DE + N++ N+ L C +S+A + E M GVRP+ S+ + + +
Sbjct: 423 DEAVACGIANVFTYNSLLSWLCKE-GKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQ 481
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
G + + M E G ++ YS L+ GY K G+ E A + + G N+ SDF+
Sbjct: 482 GDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAF-GLYDRMRGENIAPSDFT 540
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
++ G + G + + +KL G + II V G + A +
Sbjct: 541 CNI---IINGLCKAGRTSESQDRL---KKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALA 594
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ EM G S + Y + +CK + A +++ ++ + G++LDV Y ALI+
Sbjct: 595 VYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFC 654
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
D +A L +++E + K Y ++++G + E A L + + + +
Sbjct: 655 RKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNME-AALHLHKRMINEGIPCDL 713
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+ ++I K G+L A M+ P+ TY LI+G Q + + +
Sbjct: 714 QIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILED 773
Query: 570 IKRKIST 576
+ RK T
Sbjct: 774 MDRKCMT 780
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/498 (19%), Positives = 192/498 (38%), Gaps = 63/498 (12%)
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLK 199
LD + ++ ++ + A L++ M +++ ++P E+ ++ +C K + +K
Sbjct: 257 LDARAYSIVIEAVCKKPDSVAALGLLREM-RDKGWVPHEVIFTRVIGVCMKQGKMLEAVK 315
Query: 200 VFEECCRIALDENLDFMKP-NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
V E L KP N+ ++G C + A ++ + M+ G+ PN +
Sbjct: 316 V--------KGEMLSCGKPMNVVVATTLMKGYCKQ-GDLDSALELFDKMNENGICPNNVT 366
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ + G +K E+ + M S + +SLI GY+K + E AS+
Sbjct: 367 YAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKL----- 421
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
F + C + F N ++S
Sbjct: 422 ---------FDEAVACGIANVFTYN-----------------------------SLLSWL 443
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
G +A SI ++M G + Y + +C++ A + +++ GL+ ++
Sbjct: 444 CKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNL 503
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
Y L++ D + AF L+ MR I + I+ GL + R L +
Sbjct: 504 ITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKK 563
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+V++ + +N II F K G + A M + PN TY +LING+ +
Sbjct: 564 LVQEGFIPT-CMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSN 622
Query: 559 QYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVF 618
L + E+K KGI+ + + A + + G Q++ + QE+ +
Sbjct: 623 NMDLALKVMDEMK-------NKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLS 675
Query: 619 VDKWKYKQAFMENHKKLK 636
+K Y + + +KL+
Sbjct: 676 PNKVVY-SSMISGFRKLQ 692
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 143/379 (37%), Gaps = 69/379 (18%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQN 343
G V +++LI+G K NL+ R ME++ + TY ++ G +
Sbjct: 253 GLRPTTVSFNTLINGLCKSRNLDEGFRL------KKTMEENRIYPDVFTYSVLIHGLCKE 306
Query: 344 GNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
G + L E Q+ L P+GI +I D A + +M G
Sbjct: 307 GRLDVAEQLFDEMQQRGLRPNGITFT-----ALIDGQYRSRRMDSAMNTYHQMLTMGVKP 361
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
L +Y L CK +A +LV ++ G++ D Y LI+ D +SA +
Sbjct: 362 DLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIR 421
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
+ M E LD V + ++I FC+
Sbjct: 422 KGMNEE-------------------------GVVLDNVA-----------FTALISGFCR 445
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKG 581
GR+ DA+RTLR M+ +P+D TY +I+GY + M ++ +++ +G K
Sbjct: 446 DGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGN----VKMGFKLLKEMQINGHKP 501
Query: 582 IKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLR 641
+N++ + L K G ++E + V D Y +E H K
Sbjct: 502 GVITYNVL---MNGLCKQGQMKNANMLLEAMLNLGVTPDDITY-NILLEGHCK------- 550
Query: 642 KRNFKKMEALIAFKNWAGL 660
K E L+ +N GL
Sbjct: 551 ---NGKAEDLLKLRNEKGL 566
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 140/338 (41%), Gaps = 16/338 (4%)
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAY-LYALKGLQEKIVELESLMNEFGFSSQMVFY 294
S+ DA+ + + G+RP SF L L + L E L+ M E + Y
Sbjct: 238 SIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGF-RLKKTMEENRIYPDVFTY 296
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANL 352
S LI G K G L+ A + M+Q T+ ++ G ++ + N
Sbjct: 297 SVLIHGLCKEGRLDVAEQLF------DEMQQRGLRPNGITFTALIDGQYRSRRMDSAMN- 349
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
++ G+ D + +++ +G +KA ++DEM G Y +
Sbjct: 350 --TYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDG 407
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
YCKE A ++ ++ G+ LD + ALI + A R+M EA +
Sbjct: 408 YCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPD 467
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
+Y ++ G + ++ L E+ + + V T +N +++ CK G++++A
Sbjct: 468 DATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVIT--YNVLMNGLCKQGQMKNANML 525
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
L M+ L P+D TY L+ G+ + +L + +E
Sbjct: 526 LEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 111/230 (48%), Gaps = 11/230 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP++ N L G C + V+ A K+++ M ++G++P++ ++ L Y +G E
Sbjct: 359 VKPDLVMYNTLLNGLC-KVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESA 417
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+E+ MNE G V +++LISG+ + G + A RT+ + G M+ D TY
Sbjct: 418 MEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAG-MKPDD---ATYTM 473
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V+ G+ + GNVK L+ E Q V+ +V +++ G A+ +L+ M
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNV---LMNGLCKQGQMKNANMLLEAML 530
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
G + Y L+ +CK + + +L + GL +D Y +L+
Sbjct: 531 NLGVTPDDITYNILLEGHCKNGKAEDLLKLR---NEKGLIVDYAYYTSLV 577
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 124/311 (39%), Gaps = 19/311 (6%)
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVA 196
P + F T+ L RN + F L K M +NR + + + +C++ VA
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEG---FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVA 312
Query: 197 FLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
++F+E + L +PN A ++G Y + + A M +GV+P+
Sbjct: 313 -EQLFDEMQQRGL-------RPNGITFTALIDGQ-YRSRRMDSAMNTYHQMLTMGVKPDL 363
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
+ L G K +L M G + Y++LI GY K G+LESA +
Sbjct: 364 VMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESA----ME 419
Query: 317 CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
G N E + ++ GF ++G V+ + E + +G+ D + +I
Sbjct: 420 IRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE---MVEAGMKPDDATYTMVID 476
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
G +L EM G G+ Y + CK+ + A L+ + + G+
Sbjct: 477 GYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTP 536
Query: 437 DVGNYDALIEA 447
D Y+ L+E
Sbjct: 537 DDITYNILLEG 547
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP + N + G C Q + +A ++E M LGV P++ ++ L + G E ++
Sbjct: 500 KPGVITYNVLMNGLCKQGQ-MKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 558
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVK 303
+L NE G +Y+SL+S Y K
Sbjct: 559 KLR---NEKGLIVDYAYYTSLVSEYNK 582
>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
Length = 690
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 177/438 (40%), Gaps = 82/438 (18%)
Query: 205 CRIALDENLDF--------MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
C+ + + LDF + I +CN L+G + + A +++ + G PN
Sbjct: 229 CKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG--LSVDQIEVASRLLSLVLDCGPAPNV 286
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA------ 310
+F L + +G ++ +L +M + G ++ YS+LI GY K G L
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 311 -------------SRTILLCLGGGNMEQSDFSKE------------TYCEVVKGFLQNGN 345
S TI + + G++ + + TY ++KG Q+G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 346 VK---GLANLIIEAQKLEPSGIVVDRSV-----------GFGIISACVNLG--------- 382
+ G+ I++ + +EPS + + GF + + +G
Sbjct: 407 IYEAFGMYGQILK-RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 383 -----LSDKA---HSILDEMNACGCSVGLGVYV--PTLKAYCKEHRTAEATQLVMDISSS 432
LS + H++ + G S+ L V V + +C+ +R EA ++ +
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G++ DV + ++ SI + A LF M + + +Y T++ ++ +P +
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
D +++ ++ N +IH K R+EDA + +I + EP+ TY ++I
Sbjct: 586 LQLFD-LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 553 GYVT------AEQYFSVL 564
GY + AE+ F +L
Sbjct: 645 GYCSLRRLDEAERIFELL 662
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 130/327 (39%), Gaps = 30/327 (9%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE--KIVELESLMNEF---GFSSQM 291
++ A V + M G+ PN + Y +KGL + +I E + + G +
Sbjct: 372 LATASVVYKRMLCQGISPN-----VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE--VVKGFLQNGNVKGL 349
V YSSLI G+ K GNL S G D K Y V+ G L +G K
Sbjct: 427 VTYSSLIDGFCKCGNLRS-----------GFALYEDMIKMGYPPDVVIYGVLVDGLSK-- 473
Query: 350 ANLIIEAQ----KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
L++ A K+ I ++ V +I L D+A + M G +
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
+ ++ E R EA L + GL+ D Y LI+A LF M+
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+I ++ L + HR E + F + ++E ++E +N++I +C RL
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG-KMEPDIVTYNTMICGYCSLRRL 652
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++A+R + F PN T LI+
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIH 679
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 135/338 (39%), Gaps = 47/338 (13%)
Query: 251 GVRPNE-SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G+ P+ S+ GF+ KG K ++ L+ E GF +V + ++ G + + +E
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEV 269
Query: 310 ASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPS----- 362
ASR + L L G T+C ++ GF + G + +L ++E + +EP
Sbjct: 270 ASRLLSLVLDCGPAPNV----VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 363 -------------------------GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G+ +D V I V G A + M
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G S + Y +K C++ R EA + I G++ + Y +LI+ + +S
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMEN----HRPELMAAFLDEVVEDPRVEVKTHDWN 513
F+L+ DM + Y ++ GL + H L + + R+ V +N
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI---RLNVVV--FN 500
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
S+I +C+ R ++A + R M +P+ T+ +++
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 158/393 (40%), Gaps = 34/393 (8%)
Query: 240 AEKVIETMSVLGVRPNESSFGFL-AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
E V TM G++P+ S+F L L ++ I+ +E M+ +G +++L+
Sbjct: 177 VENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEE-MSSYGLVPDEKTFTTLM 235
Query: 299 SGYVKLGNLESASRTILLCLGGG--------NMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
G+++ GN++ A R L G N+ F KE E F+ + +G
Sbjct: 236 QGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKH 295
Query: 351 NLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
+ IE +++ G D +I + G +A +L EM GC+ + Y
Sbjct: 296 TMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTL 355
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ +CK + EA ++ + GL + Y+ LI+ S+ Q A L M +
Sbjct: 356 IDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGL 415
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
K +Y +++T + AA + + + E + ++I CKAGR+E A
Sbjct: 416 KPDKFTYNSMLTYFCREGDIQ-KAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVAS 474
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
R LR + Y +I ++ + ++ E++ K N
Sbjct: 475 RLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEK------------GNTP 522
Query: 590 DAFLYALVKGGF----------FDAVMQVVEKS 612
DAF Y +V G D V++++EK
Sbjct: 523 DAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKG 555
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 130/325 (40%), Gaps = 12/325 (3%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G+ P+ ++ Y G+ + LM G Y++L+ G + G + A
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDR 368
+ G + Y +V G + G + L+ E + EP+ +V +
Sbjct: 162 MTVFV----GMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYN- 216
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+I N G + A + + M+ CS + Y + CK + A L
Sbjct: 217 ----ALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ +GL+ +V Y ALI+ Q AF L M + ++ ++ L + +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
E FL +V+ V+V + S+I CK G+++ A +++MI F P+ +Y
Sbjct: 333 VEEAQLFLGSLVKK-GVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYS 391
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRK 573
SLI+G ++ +M ++ K
Sbjct: 392 SLIDGLCRQKKLSQATLMLEDMMEK 416
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 129/338 (38%), Gaps = 44/338 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PNI NA ++G C + A KV E M PN ++ L + G E+ +
Sbjct: 209 EPNIVVYNALIDGYCNA-GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L S M E G +V Y++LI G G+L+ A R + L
Sbjct: 268 VLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHL-------------------- 307
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+E +G+V + +I A ++A L +
Sbjct: 308 ----------------------METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVK 345
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G V VY + CK + A +L+ + S G D +Y +LI+ +
Sbjct: 346 KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A + DM E I +Y I+ L+ E D+++ + + +
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIAT-GINPDIVTYTVFV 464
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++C+ GR+EDA+ + +M+ PN TY +LI GY
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 150/367 (40%), Gaps = 20/367 (5%)
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
++ESL + + + Y++LI+ Y G++ +A + + L G S Y
Sbjct: 59 DMESLASRMP-ARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDS----YAYTSF 113
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEP-SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V G+ + G + + + L P G + ++ + G+ +A ++ M
Sbjct: 114 VLGYCRAGMLTHACRVFV----LMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMR 169
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A C+ VY + C+ RT EA L+ + S+G + ++ Y+ALI+ + + +
Sbjct: 170 ADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEME 229
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A +F M R +Y ++ GL ++ + E +VE +E + ++
Sbjct: 230 HALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVE-AGLEPNVVTYTAL 288
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I C G L+ A R L M PND T+ LI+ E+ E + +
Sbjct: 289 IQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV-------EEAQLFLG 341
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAF--MENHK 633
+ +KG+K + + + L K G DA ++++K D Y + K
Sbjct: 342 SLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQK 401
Query: 634 KLKVAKL 640
KL A L
Sbjct: 402 KLSQATL 408
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 147/350 (42%), Gaps = 23/350 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA-YLYALKGLQEK 274
++PN+ A ++G C + A +++ M G+ PN+ +F L L + ++E
Sbjct: 278 LEPNVVTYTALIQGQC-NEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+ L SL+ + G V Y+SLI G K G +++A + + G + + +Y
Sbjct: 337 QLFLGSLVKK-GVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA----HSYS 391
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G + K L+ + + + GI II V S+ I D+M
Sbjct: 392 SLIDGLCRQ---KKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
A G + + Y +++YC+E R +A +++ + G+ ++ Y+ LI
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE------------LMAAFLDEVVED 502
AFS F M + SY ++ +++ + + L+++ E
Sbjct: 509 SQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITER 568
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++ + ++ I C+ RLE+AK M P++ Y S+I+
Sbjct: 569 -QLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 155/367 (42%), Gaps = 30/367 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ + ++G C + V A +V + M G PN ++G L Y K
Sbjct: 454 LAPNVVIYTSIIDGYC-KVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKA 512
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS--KETY 333
+ L + M E G + ++ Y++LI G K ++A R + ME++ + ++ Y
Sbjct: 513 MALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEM------MEKNGLTPDEQAY 566
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+ ++G + + ++ G+V+ + ++ G +D A ++++
Sbjct: 567 NVLTDALCKSGRAEEAYSFLVR------KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEK 620
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M GC L Y L+A CK+ + EA ++ ++ SG++ ++ Y +I I
Sbjct: 621 MVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGK 680
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A SLF +M + +Y ++ + + E + E+ D V ++
Sbjct: 681 HDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG-VTPDVVTYH 739
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY---------LSLINGYVTAEQYFSVL 564
I+ G ++ A TL+RM+ EPN TY +SLIN + Y
Sbjct: 740 IFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAH-----YIDTS 794
Query: 565 MMWHEIK 571
MW+ I+
Sbjct: 795 GMWNWIE 801
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 152/358 (42%), Gaps = 59/358 (16%)
Query: 206 RIALDE-NLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
R LDE L + P+++ NA ++G C + DA + M G P++ ++ L
Sbjct: 304 RGLLDEMPLRGVVPSVWTYNAMIDGYCKS-GRMKDALGIKALMEQNGCNPDDWTYNSL-- 360
Query: 265 LYALKGLQEKIVELESLMN---EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+Y L G K+ E E L+N GF+ ++ +++LI+GY K ++ A R
Sbjct: 361 IYGLCG--GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRV------KS 412
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
NM S+ + LQ V L N++I+ +L+
Sbjct: 413 NMISSNCKLD---------LQAYGV--LINVLIKKCRLK--------------------- 440
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
+A L+EM A G + + +Y + YCK A ++ + G + Y
Sbjct: 441 ----EAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTY 496
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVV 500
+LI I + A +L M+E I +Y T++ G + H E AF L E++
Sbjct: 497 GSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKH--EFDNAFRLFEMM 554
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL-RRMIFLQFEPNDQTYLSLINGYVTA 557
E + +N + A CK+GR E+A L R+ + L TY SL++G+ A
Sbjct: 555 EKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVL----TKVTYTSLVDGFSKA 608
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 148/374 (39%), Gaps = 67/374 (17%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEK---VIETMSVLGVRPNESSFGFLAY-LYALKGL 271
M+ + Y CNA L G C SD K ++ M ++G R NE S+ L LY + +
Sbjct: 210 MQMDTYTCNALLLGYC----RTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCV 265
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--- 328
+E +V L +M + G S + Y+ LI G K G + A G +++
Sbjct: 266 REALV-LVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDAR---------GLLDEMPLRGV 315
Query: 329 --SKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
S TY ++ G+ ++G +K + ++E P + S+ +G+ G
Sbjct: 316 VPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYN-SLIYGLCG-----GKL 369
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A +L+ A G + + + + YCK R +A ++ ++ SS +LD+ Y L
Sbjct: 370 DEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVL 429
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I I + A +M GL P
Sbjct: 430 INVLIKKCRLKEAKETLNEM--------------FANGLA------------------PN 457
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
V + T SII +CK G + A + M PN TY SLI G + ++ +
Sbjct: 458 VVIYT----SIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAM 513
Query: 565 MMWHEIKRKISTDG 578
+ +++ T G
Sbjct: 514 ALITKMQEDGITPG 527
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 12/201 (5%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + AYCK+ A A + + SG+Q+D +AL+ + D + A L M
Sbjct: 182 YNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMP 241
Query: 466 EARIYDLKGSYLTIMTGLMENH--RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
+ SY ++ GL E R L+ F+ +V+D + H + +I CK G
Sbjct: 242 LMGCRRNEYSYTILIQGLYEARCVREALVLVFM--MVQDG-CSLNLHMYTLLIKGLCKEG 298
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIK 583
R+ DA+ L M P+ TY ++I+GY + + L IK + +G
Sbjct: 299 RIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDAL----GIKALMEQNGCNPDD 354
Query: 584 FEHNLVDAFLYALVKGGFFDA 604
+ +N + +Y L G +A
Sbjct: 355 WTYN---SLIYGLCGGKLDEA 372
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 149/365 (40%), Gaps = 54/365 (14%)
Query: 231 CYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
CY QS + A ++ T+ G +PN +F + + + G+ K ++ + G+
Sbjct: 99 CYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLF 158
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVK 347
Y +LI+G K G +++A + ME+S Y ++ G ++G V
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLL------QEMEKSSVQPNLVMYSALIDGLCKDGFVS 212
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG------------------------- 382
L ++ GI++D +I C ++G
Sbjct: 213 DALGL---CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269
Query: 383 -LSD---------KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
L D +A +L M+ G + Y ++ YC EA +L +
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GL+ DV NY+ LI+ ++ A LF+++ + SY +++ GL + R +
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389
Query: 493 AAFLDEV---VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
LDE+ + P V +N +I A CK GR+ +A L M+ +PN TY +
Sbjct: 390 KKLLDEMHGSAQPPDVVT----YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 550 LINGY 554
+++GY
Sbjct: 446 MMDGY 450
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 152/368 (41%), Gaps = 33/368 (8%)
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIA------------LDENLDFMKPNIYACNAALEG 229
G L+D NS + + CC + + EN+D P+ Y N ++
Sbjct: 225 GILLDAVTYNS-------LIDGCCSVGRWQEVTQLLTKMVRENVD---PDDYTFNILIDA 274
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
C + +A+ V+ MS G +P+ ++ L Y + + EL + M + G
Sbjct: 275 LCKE-GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP 333
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
++ Y+ LI GY K ++ A + L N+ + S Y ++ G +G + +
Sbjct: 334 DVLNYNVLIDGYCKTKMVDEA-MVLFKELCNKNLVPTIAS---YNSLIDGLCNSGRISHV 389
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
L+ E VV ++ +I A G +A +L M G + Y
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNI---LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ YC + A + + SGL+ D+ NY+ LI ++ A LF++MR +
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR-VEVKTHDWNSIIHAFCKAGRLEDA 528
SY +++ GL R + LDE+ + + +V T +N ++ AFCK + A
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVIT--YNILLDAFCKTQPFDKA 564
Query: 529 KRTLRRMI 536
R+++
Sbjct: 565 ISLFRQIV 572
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 153/405 (37%), Gaps = 59/405 (14%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVE-LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
V PNE ++ + L K E L+ + + + +V YS++I+G+ K G ++ A
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
+ + M TY VV G ++G + ++ ++++ G+ D+
Sbjct: 65 CEILREMVTRDGMAPDVV---TYTSVVDGLCRDGKMDRACEMV---REMKLKGVEPDKFT 118
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV--MD 428
+I+ N D+A + E+ C + + C+E R EA +L M+
Sbjct: 119 FSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEME 178
Query: 429 ISSSGL-QLDVGNYDALIEASITS-----------------------------------Q 452
+ G + DV Y ALI+ S
Sbjct: 179 MREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 238
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
D A LFR M +Y T++ GL H+ + +DE+ T +
Sbjct: 239 DLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATC-CPADTVSY 297
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
N+++ +C+ GR+E+AK+ + M P+ TY L+ G+ A + + +K
Sbjct: 298 NALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKT 357
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGFFDA--VMQVVEKSQEM 615
D D Y++V G+ A ++ E QEM
Sbjct: 358 AAGIDP-----------DVVTYSIVVAGYSRAKRFVEAAEFIQEM 391
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 166/401 (41%), Gaps = 24/401 (5%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR---PNESSFGFLAYLYALKGLQE 273
KP++ A ++G C + EK ++ + V+ R PN ++ L + G +
Sbjct: 186 KPDVVTYTALIDGFCKS----GNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 241
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET- 332
+ ++L M G +V Y++LI G +++A R ++ M + +T
Sbjct: 242 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAA-RLLM-----DEMTATCCPADTV 295
Query: 333 -YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
Y ++ G+ + G ++ L +++ + DR ++ N ++A +L
Sbjct: 296 SYNALLDGYCRLGRIEEAKQLF---KEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLL 352
Query: 392 DEM-NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+ M A G + Y + Y + R EA + + ++ + + + Y +LI+
Sbjct: 353 ENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCK 412
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ A + +++ + + +Y ++ GL R E L+E+V + RVE
Sbjct: 413 AGRVNHAMEVLKNVDKPDVV----TYTIVIEGLCGTDRTEEALTLLEEMV-NKRVEPSVG 467
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+NS+I A C+ G +++A + L M EP TY +L+ G+ + ++ +
Sbjct: 468 TFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVM 527
Query: 571 KRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
+RK A + L K D M VVE+
Sbjct: 528 RRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEE 568
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 146/360 (40%), Gaps = 37/360 (10%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D M P++ + ++G C + A +++ M + GV P++ +F L
Sbjct: 75 DGMAPDVVTYTSVVDGLCRD-GKMDRACEMVREMKLKGVEPDKFTFSAL----------- 122
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-- 331
+ N + Y +++ +L + S++ LC E + +E
Sbjct: 123 ----ITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEME 178
Query: 332 ------------TYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISA 377
TY ++ GF ++GN++ + ++E +K P+ +V S+ G+ A
Sbjct: 179 MREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPN-VVTYSSLLHGLCKA 237
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
G D+A + M + GC + Y + C H+ A L+ +++++ D
Sbjct: 238 ----GDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPAD 293
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
+Y+AL++ + A LF++M + +Y ++ G R E L+
Sbjct: 294 TVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLE 353
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ ++ ++ ++ + +A R +A ++ MI PN TY SLI+G A
Sbjct: 354 NMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKA 413
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 33/278 (11%)
Query: 237 VSDAEKVIETM-SVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMV 292
+ +A ++E M + G+ P+ ++ + Y+ ++ VE + E + V
Sbjct: 345 LEEARFLLENMKTAAGIDPDVVTYSIVVAGYSR---AKRFVEAAEFIQEMIARNVAPNAV 401
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL 352
YSSLI G K G + A + N+++ D TY V++G + L
Sbjct: 402 TYSSLIDGLCKAGRVNHAMEVL------KNVDKPDVV--TYTIVIEGLCGTDRTEEALTL 453
Query: 353 IIEA--QKLEPSGIVVDRSVGF--GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
+ E +++EPS VG +I A LG D+A +L M A G G+ Y
Sbjct: 454 LEEMVNKRVEPS-------VGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT 506
Query: 409 TLKAYCKEHRTAEATQL--VM-----DISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
L+ + + R A +L VM SS+ + + ALI +++ A ++
Sbjct: 507 LLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVV 566
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
++R + L I+ GL+ R E ++ +
Sbjct: 567 EELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 604
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 139/363 (38%), Gaps = 65/363 (17%)
Query: 194 FVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR 253
F F K+ E C P++ +CN L G L + +V + M+ +G+
Sbjct: 199 FTTFRKIVEVGC-----------VPSVISCNCLLNGL-LKLNRIDQCWQVYKEMARVGIH 246
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT 313
PN +F L +++ G +K+ + M E GF +V Y++LIS Y + G L+ A
Sbjct: 247 PNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYL 306
Query: 314 ILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
+ M + + + +Y ++ G + G V+
Sbjct: 307 YRI------MYRRNVLPDLVSYTALMNGLCKEGKVR------------------------ 336
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
+AH + M G + + + + YCKE + E+ L+ ++
Sbjct: 337 --------------EAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIG 382
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
SG+ D LIE SA +L ++ + Y +M + E RP
Sbjct: 383 SGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFA 442
Query: 492 MAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
+ L + + P VE+ +N +I + CK+ + DA M +P+ TY
Sbjct: 443 AKSLLQRISQRGYVPGVEI----YNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYK 498
Query: 549 SLI 551
+LI
Sbjct: 499 ALI 501
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 126/335 (37%), Gaps = 35/335 (10%)
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
LG++P+ ++ FL ++ A F M F + LI E
Sbjct: 119 LGLQPSIQNYCFLVHILAWSK---------------EFKEAMKFLTELIKLVKDCSFNED 163
Query: 310 ASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK-GLANLIIEAQKLEPSGIVVDR 368
+T+L C N + F +VK +++ G +K G +K+ G V
Sbjct: 164 VFQTLLFCCQDCNWDPVIFDM-----LVKAYVREGMIKEGFTTF----RKIVEVGCVPSV 214
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+++ + L D+ + EM G + +C++ + +
Sbjct: 215 ISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLER 274
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ G + D+ Y+ LI AF L+R M + SY +M GL + +
Sbjct: 275 MEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGK 334
Query: 489 PELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
++ +P + +N++I +CK G++ +++ L MI P+
Sbjct: 335 VREAHQLFHRMIHRGLNPDIV----SFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKV 390
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKR---KISTD 577
T LI GY + S L + E++R ISTD
Sbjct: 391 TCQVLIEGYRKEARIVSALNLVVELERFGVPISTD 425
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 149/363 (41%), Gaps = 67/363 (18%)
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
VF+E R + +P + N + G C +++A + M+ G+ P+ ++
Sbjct: 264 VFDEMLRRGV-------QPTVVTFNTLMSGMCKA-SDLNNANALRGLMAKAGIAPDVYTY 315
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL--------ESAS 311
G G + +E+ M E G + V ++LI + K G++ E A+
Sbjct: 316 GAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMAT 375
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
R + ++D Y +V GF + ++K +++ E +K G+ D+
Sbjct: 376 RGV----------KADLV--AYNALVNGFCRVRDMKAANDIVEEMRK---DGLKPDKVTY 420
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
+I C G D A + EM+ G ++ Y + K R+ +A +++ ++
Sbjct: 421 TTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMME 480
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
+GLQ D Y +I+A + D ++ F ++M+ KG I+T
Sbjct: 481 AGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQN------KGKNPGIVT---------- 524
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+N +++ FC G++++A L M+ + PND TY L+
Sbjct: 525 --------------------YNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILL 564
Query: 552 NGY 554
+G+
Sbjct: 565 DGH 567
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 139/344 (40%), Gaps = 22/344 (6%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQ 290
L SV +A + GV P F L G K+ ++ +E G
Sbjct: 220 LPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSG---KLASARNVFDEMLRRGVQPT 276
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKG 348
+V +++L+SG K +L +A+ G M ++ + + TY ++G + G ++
Sbjct: 277 VVTFNTLMSGMCKASDLNNANAL------RGLMAKAGIAPDVYTYGAFIQGLCKTGRIQD 330
Query: 349 LANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
+ E + L P+ +V+ + V GL + EM G L Y
Sbjct: 331 AMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRW-----EMATRGVKADLVAY 385
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ +C+ A +V ++ GL+ D Y LI+ + +A + ++M +
Sbjct: 386 NALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSD 445
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
+ +Y +++GL + R L E++E ++ + +I AFCK G ++
Sbjct: 446 EGVALDDVTYTALISGLSKAGRSVDAERILCEMME-AGLQPDNTTYTMVIDAFCKNGDVK 504
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+ L+ M P TY ++NG+ + Q + M+ + +
Sbjct: 505 TGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAM 548
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 14/217 (6%)
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A ++ DEM G + + + CK A L ++ +G+ DV Y A I+
Sbjct: 261 ARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQ 320
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL-MAAFLDEVVEDPRV 505
+ Q A +F +M E + ++T L++ H E + A L+ E
Sbjct: 321 GLCKTGRIQDAMEMFEEMCERGL----NPNTVVLTTLIDAHCKEGDVTAGLELRWEMATR 376
Query: 506 EVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
VK +N++++ FC+ ++ A + M +P+ TY +LI+G + +
Sbjct: 377 GVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTA 436
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
+ M E+ +G+ + A + L K G
Sbjct: 437 MEMKQEMS-------DEGVALDDVTYTALISGLSKAG 466
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 147/362 (40%), Gaps = 53/362 (14%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAE-KVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+KP++ AC L Q ++D K+ + M LGV N + L + + G EK
Sbjct: 164 LKPHLQACTVLLNSLVK--QRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEK 221
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLG-NLESASRTILLCLGGGNMEQSDFSKE-- 331
+L S M E G + Y++LIS Y K + E+ S ME+S +
Sbjct: 222 AEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQ-------DRMERSGVAPNIV 274
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
TY + GF + G ++ L E + + + +I + D+A +
Sbjct: 275 TYNSFIHGFSREGRMREATRLFREIK----DDVTANHVTYTTLIDGYCRMNDIDEALRLR 330
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+ M + G S G+ Y L+ C++ R EA +L+ ++S ++ D + LI A
Sbjct: 331 EVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKI 390
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+D SA + + M I +GL ++ +
Sbjct: 391 EDMVSAVKVKKKM--------------IESGL----------------------KLDMYS 414
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+ ++IH FCK LE+AK L MI F P TY L++G+ + + + E +
Sbjct: 415 YKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFE 474
Query: 572 RK 573
++
Sbjct: 475 KR 476
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 21/268 (7%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+K+ G+V + V ++ AC G +KA +L EM G + Y + YCK+
Sbjct: 192 KKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKK 251
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
EA + + SG+ ++ Y++ I + A LFR++++ D+ ++
Sbjct: 252 SMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD----DVTANH 307
Query: 477 LTIMTGLMENHRPELM--AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+T T + R + A L EV+E +NSI+ C+ GR+ +A R L
Sbjct: 308 VTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY 594
M + EP++ T +LIN Y E S + ++K+K+ G K +D + Y
Sbjct: 368 MSGKKIEPDNITCNTLINAYCKIEDMVSAV----KVKKKMIESGLK--------LDMYSY 415
Query: 595 -ALVKGGFFDAVMQVVEKSQEMKVFVDK 621
AL+ G F V+++ +E+ ++K
Sbjct: 416 KALIHG--FCKVLELENAKEELFSMIEK 441
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 139/371 (37%), Gaps = 44/371 (11%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQ 143
TD WK FK + + + V N L+ S D ++ + +E+ D
Sbjct: 184 TDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSE----MEEKGVFPDIF 239
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRK------------- 190
T +TL+ + A ++ M ++ + F+ R+
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI 299
Query: 191 ----NSNFVAFLKVFEECCRI-ALDENLDFMK--------PNIYACNAALEGCCYGLQSV 237
+N V + + + CR+ +DE L + P + N+ L C +
Sbjct: 300 KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCED-GRI 358
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+A +++ MS + P+ + L Y V+++ M E G M Y +L
Sbjct: 359 REANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL 418
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSK--ETYCEVVKGFLQNGNVKGLANLIIE 355
I G+ K+ LE+A + +M + FS TY +V GF + L+
Sbjct: 419 IHGFCKVLELENAKEELF------SMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLL-- 470
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK-AYC 414
++ E G+ D ++ G+I L D A + + M G VG V T+ AY
Sbjct: 471 -EEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGL-VGDSVIFTTMAYAYW 528
Query: 415 KEHRTAEATQL 425
+ + EA+ L
Sbjct: 529 RTGKVTEASAL 539
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 115/528 (21%), Positives = 213/528 (40%), Gaps = 43/528 (8%)
Query: 56 QQQQQQTLTQDNIT--SLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHL 113
+ + Q L D++T S+ L K+ DEA + F+ L +N P N++I
Sbjct: 296 HELKSQGLVPDDVTFTSMIGVLCKA---ERVDEAVELFEELDSNKSVPCVYAYNTMIMGY 352
Query: 114 SSLQDNHNLKRAFASVVYVIEKN------PKLLDFQTVHTLLGSMRNANTAAPAFALVKC 167
S+ F ++E+ P ++ + + T LG A +++
Sbjct: 353 GSVGK-------FNEAYSLLERQKRKGCIPSVIAYNCILTCLG---RKGKVEEALRILEA 402
Query: 168 MFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAAL 227
M + P L+D+ K A LKV + ++ E F PNI N +
Sbjct: 403 MKMDA--APNLTSYNILIDMLCKAGELEAALKVQD-----SMKEAGLF--PNIITVNIMI 453
Query: 228 EGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGF 287
+ C Q + +A + + P+ +F L G L M + G
Sbjct: 454 DRLCKA-QRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQ 512
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSKETYCEVVKGFLQNGNV 346
+ V Y+SLI + K G E + + G + + + C G ++ G
Sbjct: 513 TPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKG-- 570
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
+ L I +AQ L P V S+ +I V G S + + EM G + Y
Sbjct: 571 RALFEEI-KAQGLTPD--VRSYSI---LIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAY 624
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ +CK + +A QL+ ++ + GLQ V Y ++I+ A+ LF + +
Sbjct: 625 NIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK- 683
Query: 467 ARIYDLKGS-YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
++ DL Y +++ G + R + L+E+++ + T+ WN ++ A KA +
Sbjct: 684 SKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKG-LTPNTYTWNCLLDALVKAEEI 742
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++A + M L+ PN+ TY ++NG ++ + W E++++
Sbjct: 743 DEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQ 790
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 133/339 (39%), Gaps = 15/339 (4%)
Query: 241 EKVIETMSVLGVRP-NESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
E+++E MS+ G P N + +A + L+E +E+ M +F F Y++LI
Sbjct: 152 EQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIET-MRKFKFRPAYSAYTTLI- 209
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
G L +A + M++ + + + ++ F + G V +L+ E +
Sbjct: 210 -----GALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMK 264
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ +V +V I +G D A E+ + G + + CK
Sbjct: 265 SNSFNADLVLYNV---CIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAE 321
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
R EA +L ++ S+ V Y+ +I + F A+SL + +Y
Sbjct: 322 RVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYN 381
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
I+T L + E L+ + D + + +N +I CKAG LE A + M
Sbjct: 382 CILTCLGRKGKVEEALRILEAMKMDAAPNLTS--YNILIDMLCKAGELEAALKVQDSMKE 439
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
PN T +I+ A++ ++ + K+ T
Sbjct: 440 AGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCT 478
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 65/361 (18%), Positives = 134/361 (37%), Gaps = 54/361 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N ++ C + + + E + G+ P+ S+ L + G + +
Sbjct: 549 PDLMLLNNYMD-CVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYK 607
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
L M E G Y+ +I G+ K G + A + + M+ TY
Sbjct: 608 LFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLL------EEMKTKGLQPTVVTYGS 661
Query: 336 VVKGFLQNGNVKGLANLIIEAQ-KLEPSGIVVDRSV--GFGIISACVNLGLSDKAHSILD 392
V+ G + + L EA+ K +VV S+ GFG +G D+A+ IL+
Sbjct: 662 VIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFG------KVGRIDEAYLILE 715
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
E+ GL + ++ L++A + ++
Sbjct: 716 EL-----------------------------------MQKGLTPNTYTWNCLLDALVKAE 740
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A F++M+ + + +Y ++ GL + + F E ++ ++ T +
Sbjct: 741 EIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQE-MQKQGLKPNTITY 799
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
++I + G + +AK R P+ Y ++I G A + +++ E +
Sbjct: 800 TTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRL 859
Query: 573 K 573
K
Sbjct: 860 K 860
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 171/428 (39%), Gaps = 62/428 (14%)
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
L+ C + F +KV+E+ R D PN+ L+G C L +A +V
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVR---DPG---ASPNLATYKVMLDGLC-KLGRFKEAGEV 286
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
M + + ++G L + G + + S M + G + Y+SLI G+ +
Sbjct: 287 WSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCE 346
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSK----ETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
+G A + + + FS TY + KG L +G V L+ ++L
Sbjct: 347 VGRTGEAWKF---------WDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELL---KQL 394
Query: 360 EPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDE------------------------- 393
E V FG +I G +++A IL++
Sbjct: 395 ENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGR 454
Query: 394 ----------MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
M GC VY + +C+ + +A ++ ++++S+G + Y+
Sbjct: 455 THDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNT 514
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI+ ++ +Q A SL ++M E +Y +++ GL + + ++ DE+++
Sbjct: 515 LIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAG 574
Query: 504 -RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+V+V H N +IH C AG++++A M PN TY +L++G+
Sbjct: 575 LQVDVMVH--NILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDK 632
Query: 563 VLMMWHEI 570
+W I
Sbjct: 633 AASLWTAI 640
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 100/247 (40%), Gaps = 18/247 (7%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-- 271
D KPN + NA + G C + ++DA K+ M+ G P + Y + GL
Sbjct: 468 DGCKPNSHVYNALINGFCR-VSKINDAIKIYIEMTSNGCCPT-----IITYNTLIDGLCK 521
Query: 272 QEKIVELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
EK E SL M E GF + Y+SLI G + ++ A R L G Q D
Sbjct: 522 AEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAG--LQVDV 579
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
++ G G V + +E ++ S +V + ++ +G DKA
Sbjct: 580 MVHNI--LIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNT---LMDGFYEIGSIDKAA 634
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
S+ + G + Y +K C +RT E L+ ++ ++G+ V + L+ A
Sbjct: 635 SLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAV 694
Query: 449 ITSQDFQ 455
I Q
Sbjct: 695 IKYGPIQ 701
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 73/195 (37%), Gaps = 39/195 (20%)
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG----LQLDVGNYDALIEASITSQD 453
GC+ G+ + L A+ + R ++A +S + ++ Y+ ++ + D
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD 173
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE--------------- 498
A SLF +R + + +Y T+M+GL ++ + + LDE
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233
Query: 499 --------------------VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+V DP + ++ CK GR ++A RM+
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293
Query: 539 QFEPNDQTYLSLING 553
+ + TY LI+G
Sbjct: 294 NHQADTVTYGILIHG 308
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 11/211 (5%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
DA +V + M G +PN + L + +++ M G ++ Y++LI
Sbjct: 457 DANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLI 516
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEA 356
G K + AS M + F + TY +++G ++ V L I
Sbjct: 517 DGLCKAEKYQEASSLT------KEMLERGFKPDIRTYASLIRGLCRDKKVD--VALRIWD 568
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+ L+ +G+ VD V +I + G D+A I EM CS L Y + + +
Sbjct: 569 EILD-AGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEI 627
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+A L I +GL+ D+ Y+ I+
Sbjct: 628 GSIDKAASLWTAILDNGLKPDIVTYNTRIKG 658
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 92/236 (38%), Gaps = 16/236 (6%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G D+A S+ + G + Y + K + A L+ ++ + G+Q D Y
Sbjct: 172 GDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCY 231
Query: 442 DALIEASITSQDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
+AL+ + F+ A ++ + R+ +Y ++ GL + R + ++
Sbjct: 232 NALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMM 291
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+ + T + +IH C++G ++ A R M+ + Y SLI G+ +
Sbjct: 292 ANNH-QADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRT 350
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMK 616
W + G GI+ Y ++ G D+ M V E ++ +K
Sbjct: 351 GEAWKFW-------DSTGFSGIR------QITTYNIMTKGLLDSGM-VSEATELLK 392
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 153/370 (41%), Gaps = 29/370 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P + N L G C VS+A + M +PN +F L +G + V
Sbjct: 48 PTLVTFNTLLHGLCVE-DRVSEALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVA 102
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE---TYC 334
L M E G + Y +++ G K+G+ SA + ME+ K Y
Sbjct: 103 LLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR------KMEELSHIKPDVVIYS 156
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G ++G NL IE Q GI D +I+ + G +A +L EM
Sbjct: 157 AIIDGLWKDGRHTDAQNLFIEMQD---KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEM 213
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
S + + + A KE A L+ ++ SSG+ +V + L++ S
Sbjct: 214 LVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKL 273
Query: 455 QSAFSLFRDMREARI-----YDLKG------SYLTIMTGLMENHRPELMAAFLDEVVEDP 503
+ A +F+ M+++ + + G +Y +++GL+ N L A L E +
Sbjct: 274 KDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI-NEGKFLEAEELYEEMPHR 332
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+ T ++S+I+ CK RL++A + M F PN T+ +LI GY A
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392
Query: 564 LMMWHEIKRK 573
L ++ E+ R+
Sbjct: 393 LELFCEMGRR 402
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 148/366 (40%), Gaps = 35/366 (9%)
Query: 208 ALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
ALD KPN+ + G C V +A +++ M G++PN+ ++G +
Sbjct: 69 ALDLFHQMCKPNVVTFTTLMNGLCRE-GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127
Query: 268 LKGLQEKIVELESLMNEFG-FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
G + L M E +V YS++I G K G A + M+
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFI------EMQDK 181
Query: 327 DFSKE--TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLG 382
+ TY ++ GF +G L+ E +K+ P VV S G+I+A V G
Sbjct: 182 GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPD--VVTFS---GLINALVKEG 236
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL-------VMDISSS--- 432
+ A +L EM + G + L C + +A ++ +MDI ++
Sbjct: 237 DLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAF 296
Query: 433 -GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
G++ DV Y+ LI I F A L+ +M I +Y +++ GL + R +
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356
Query: 492 MAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
D + P + +N++I +CKAG ++D M N TY+
Sbjct: 357 ATQMFDSMGSKSFSPNIVT----FNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYI 412
Query: 549 SLINGY 554
+LI G+
Sbjct: 413 TLIRGF 418
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 154/399 (38%), Gaps = 55/399 (13%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T TL+ + A AL+ M ++ P ++ G +VD K + V+ L + +
Sbjct: 83 TFTTLMNGLCREGRVVEAVALLDRMVEDG-LQPNQITYGTIVDGMCKMGDTVSALNLLRK 141
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
E L +KP++ +A ++G + +DA+ + M G+ P+ ++ +
Sbjct: 142 M------EELSHIKPDVVIYSAIIDGL-WKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMI 194
Query: 264 YLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESAS--------- 311
+ G K E + L+ E S +V +S LI+ VK G+L SA
Sbjct: 195 NGFCSSG---KWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251
Query: 312 ---------RTIL--LCLGGG---------NMEQS--DFSKETYCEVVKGFLQNGNVKGL 349
T+L LC G M++S D V+ +Q N+ +
Sbjct: 252 GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL-I 310
Query: 350 ANLIIEAQKLEPS---------GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
+ LI E + LE GIV D +I+ D+A + D M + S
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
+ + + YCK + +L ++ G+ + Y LI + + +
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDI 430
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
F++M + +Y + ++TGL + A L+E+
Sbjct: 431 FQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 144/332 (43%), Gaps = 14/332 (4%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
G+ + + S+LIS Y + G L + + +L + G + + TY V+ G
Sbjct: 228 GYGNTVFANSALISAYARSG-LVNEAMGVLESMKGAGLRPTTV---TYNAVIDA-CGKGG 282
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
V L Q L + DR ++SAC G + A ++ DEM G +
Sbjct: 283 VDLRFTLGYFRQMLRDR-LCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYT 341
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + A CK A Q+++D+ + ++ +V Y LI+ + + A L+ M+
Sbjct: 342 YNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMK 401
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
I + Y T++ ++ + +A DE +ED +E T +NS+I+ + K GRL
Sbjct: 402 SLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDE-MEDSGIEKDTVTYNSLINGYGKQGRL 460
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFE 585
+ ++ M P+ TY +LI+ Y A + ++ + K + G+K +
Sbjct: 461 DIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFK-------ESGLKPD 513
Query: 586 HNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
L +F+ L K G + + ++ EM +
Sbjct: 514 VVLFSSFIDTLAKNGLVEWALSLLNDMTEMGI 545
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 135/363 (37%), Gaps = 48/363 (13%)
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR--------- 253
+ R A D + N N+AL V++A V+E+M G+R
Sbjct: 215 DLARRAFDAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAV 274
Query: 254 ---------------------------PNESSFGFLAYLYALKGLQEKIVELESLMNEFG 286
P+ +F L + G E L M G
Sbjct: 275 IDACGKGGVDLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLG 334
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNG 344
+ Y++ I K GN+E A + +L +ME + TY ++ G+
Sbjct: 335 IGRDIYTYNTFIDAICKCGNIELAMQVLL------DMEAKNVKPNVVTYSTLIDGY---S 385
Query: 345 NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
++ + +K++ GI +DR +++ V G + + DEM G
Sbjct: 386 KLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTV 445
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y + Y K+ R + LV D+ G+ V Y LI+ + AF+++ D
Sbjct: 446 TYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDF 505
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
+E+ + + + + L +N E + L+++ E ++ +N+II AF K+
Sbjct: 506 KESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTE-MGIKPNVVTYNTIIDAFGKSKV 564
Query: 525 LED 527
L +
Sbjct: 565 LSE 567
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 117/300 (39%), Gaps = 20/300 (6%)
Query: 184 LVDICRKNSNFVAF-LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEK 242
++D C K + F L F + R D + P+ N+ L C + DA
Sbjct: 274 VIDACGKGGVDLRFTLGYFRQMLR-------DRLCPDRKTFNSLLSACSRA-GHLEDARA 325
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+ + M LG+ + ++ G E +++ M +V YS+LI GY
Sbjct: 326 LFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYS 385
Query: 303 KLGNLESASRTI--LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
KL + A + + LG + Y V+ +++ G +A I ++E
Sbjct: 386 KLEKYDEALKLYEKMKSLG------IQLDRVCYNTVLAIYVKAGKYGEIA---IVCDEME 436
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
SGI D +I+ G D ++ +M G + + Y + Y K
Sbjct: 437 DSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHG 496
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
+A + +D SGL+ DV + + I+ + + A SL DM E I +Y TI+
Sbjct: 497 DAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTII 556
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 153/370 (41%), Gaps = 29/370 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P + N L G C VS+A + M +PN +F L +G + V
Sbjct: 48 PTLVTFNTLLHGLCVE-DRVSEALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVA 102
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE---TYC 334
L M E G + Y +++ G K+G+ SA + ME+ K Y
Sbjct: 103 LLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR------KMEELSHIKPDVVIYS 156
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G ++G NL IE Q GI D +I+ + G +A +L EM
Sbjct: 157 AIIDGLWKDGRHTDAQNLFIEMQD---KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEM 213
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
S + + + A KE A L+ ++ SSG+ +V + L++ S
Sbjct: 214 LVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKL 273
Query: 455 QSAFSLFRDMREARI-----YDLKG------SYLTIMTGLMENHRPELMAAFLDEVVEDP 503
+ A +F+ M+++ + + G +Y +++GL+ N L A L E +
Sbjct: 274 KDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI-NEGKFLEAEELYEEMPHR 332
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+ T ++S+I+ CK RL++A + M F PN T+ +LI GY A
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392
Query: 564 LMMWHEIKRK 573
L ++ E+ R+
Sbjct: 393 LELFCEMGRR 402
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 146/366 (39%), Gaps = 35/366 (9%)
Query: 208 ALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
ALD KPN+ + G C V +A +++ M G++PN+ ++G +
Sbjct: 69 ALDLFHQMCKPNVVTFTTLMNGLCRE-GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127
Query: 268 LKGLQEKIVELESLMNEFG-FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
G + L M E +V YS++I G K G A + M+
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFI------EMQDK 181
Query: 327 DFSKE--TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLG 382
+ TY ++ GF +G L+ E +K+ P + G+I+A V G
Sbjct: 182 GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFS-----GLINALVKEG 236
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL-------VMDISSS--- 432
+ A +L EM + G + L C + +A ++ +MDI ++
Sbjct: 237 DLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAF 296
Query: 433 -GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
G++ DV Y+ LI I F A L+ +M I +Y +++ GL + R +
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356
Query: 492 MAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
D + P + +N++I +CKAG ++D M N TY+
Sbjct: 357 ATQMFDSMGSKSFSPNIVT----FNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYI 412
Query: 549 SLINGY 554
+LI G+
Sbjct: 413 TLIRGF 418
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 154/399 (38%), Gaps = 55/399 (13%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T TL+ + A AL+ M ++ P ++ G +VD K + V+ L + +
Sbjct: 83 TFTTLMNGLCREGRVVEAVALLDRMVEDG-LQPNQITYGTIVDGMCKMGDTVSALNLLRK 141
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
E L +KP++ +A ++G + +DA+ + M G+ P+ ++ +
Sbjct: 142 M------EELSHIKPDVVIYSAIIDGL-WKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMI 194
Query: 264 YLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESAS--------- 311
+ G K E + L+ E S +V +S LI+ VK G+L SA
Sbjct: 195 NGFCSSG---KWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251
Query: 312 ---------RTIL--LCLGGG---------NMEQS--DFSKETYCEVVKGFLQNGNVKGL 349
T+L LC G M++S D V+ +Q N+ +
Sbjct: 252 GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL-I 310
Query: 350 ANLIIEAQKLEPS---------GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
+ LI E + LE GIV D +I+ D+A + D M + S
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
+ + + YCK + +L ++ G+ + Y LI + + +
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDI 430
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
F++M + +Y + ++TGL + A L+E+
Sbjct: 431 FQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469
>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 846
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 139/339 (41%), Gaps = 11/339 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ ACN L G + + + +V E M LG+ N +F + ++ +G +K+
Sbjct: 226 PNVVACNCLLNGLS-KINYIGECWEVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKVNG 284
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M E GF +V Y+ LI+GY K LE A + +G + + S Y ++
Sbjct: 285 FLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKI-MGIRGVVPNLIS---YSALM 340
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA-CVNLGLSDKAHSILDEMNA 396
G + G +K L ++ GI D +IS C G S+L EM
Sbjct: 341 NGLCKEGKIKEAHQLF---NQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIG 397
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT-SQDFQ 455
G + Y +E + A +V ++ G+++ YD L+ A + F
Sbjct: 398 IGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFA 457
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+ L R ++ +Y+ + L + E A L + +++ + +I
Sbjct: 458 ARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNVE-EALILKSEMAKKSMKLNLTTYKAI 516
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
I C+ R +A+ L M+ L P+ + +LINGY
Sbjct: 517 ISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGY 555
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 150/344 (43%), Gaps = 21/344 (6%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEK 274
+P++ N + G C + + DA + + M + GV PN ++Y + GL + K
Sbjct: 295 EPDLVTYNILINGYCKK-RRLEDAFYLYKIMGIRGVVPN-----LISYSALMNGLCKEGK 348
Query: 275 IVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
I E L N+ G +V Y++LISGY K G R++L + G + + +
Sbjct: 349 IKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVT-- 406
Query: 332 TYCEVV-KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
C +V +G+ + G + N++ E Q+ GI + ++ ++ A G A S
Sbjct: 407 --CRIVFQGYTREGKLLSALNMVAELQRF---GIKIPENLYDYLLVALCKEGRPFAARSF 461
Query: 391 LDEMNACGCSVG-LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
L ++ G V + Y+ ++ C + EA L +++ ++L++ Y A+I
Sbjct: 462 LIRISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLC 521
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
+ A +L +M I ++ G E + + + L ++ +V T
Sbjct: 522 RVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQV-YDT 580
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N+I+ FC+ G + + +++ + + PN T +I G
Sbjct: 581 ESYNAIVKVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRG 624
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 117/312 (37%), Gaps = 55/312 (17%)
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLAN 351
V + LI YVKLG +E T N+E S C + L N G
Sbjct: 194 VIFDMLIKAYVKLGMVEKGLETFW-----KNVEGSFVPNVVACNCLLNGLSKINYIGECW 248
Query: 352 LIIEAQKLEPSGIVVDRS-VGFGIISACV-NLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
+ E E + + R+ F I++ + G SDK + L++M G L Y
Sbjct: 249 EVYE----EMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNIL 304
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ YCK+ R +A L + G+ ++ +Y AL+ + A LF M + I
Sbjct: 305 INGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGI 364
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK-AGRLEDA 528
DP V +N++I +CK G+++
Sbjct: 365 --------------------------------DPDVV----SYNTLISGYCKEGGKMQMC 388
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
+ L MI + P++ T + GY + S L M E++R GIK NL
Sbjct: 389 RSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQR-------FGIKIPENL 441
Query: 589 VDAFLYALVKGG 600
D L AL K G
Sbjct: 442 YDYLLVALCKEG 453
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 99/491 (20%), Positives = 198/491 (40%), Gaps = 28/491 (5%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKN--PKLLDFQ 143
EA + F + A P N++I S + A+ + + E+ P ++ F
Sbjct: 36 EAEELFAQMEAERSVPCAYAYNTMIMGYGSA---GRFEDAYKLLERLRERGCIPSVVSFN 92
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
++ T LG R + A F ++K + P ++D+ + EE
Sbjct: 93 SILTCLGKKRKVDEALSLFEVMK-----KDAEPNSSTYNIIIDM-------LCLGGRVEE 140
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
RI + + PN+ N ++ C + + +A K+ E+ S G P+ ++ L
Sbjct: 141 AYRILDEMEHASLFPNLLTVNIMVDRLCKA-RKLEEAYKIFESASQRGCNPDCVTYCSLI 199
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
KG ++ L M + G ++ V Y+SLI + G E + + G
Sbjct: 200 DGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC- 258
Query: 324 EQSDFSK-ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ D + TY + V + G V+ +I E + G + D +I G
Sbjct: 259 -KPDLTLLNTYMDCV---FKAGEVEK-GRMIFE--DIRSYGFLPDVRSYSILIHGLTKAG 311
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+ + +I M G ++ Y + +CK + +A +++ ++ +Q V Y
Sbjct: 312 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 371
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
A+++ A+ LF + + I Y +++ G + R + L+E+++
Sbjct: 372 AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 431
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+ + WNS++ A KA + +A + M ++ PN TY LING ++Y
Sbjct: 432 G-LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNK 490
Query: 563 VLMMWHEIKRK 573
+ W +++++
Sbjct: 491 AFVFWQDMQKQ 501
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 154/410 (37%), Gaps = 32/410 (7%)
Query: 80 LTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL 139
L +EA++ + SLFP+ N ++ L + + F S NP
Sbjct: 134 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR-GCNP-- 190
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRY----FMPFELWGGFLVDICRKNSNFV 195
D T +L+ + A+ L + M + + L F + +++ +
Sbjct: 191 -DCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH-- 247
Query: 196 AFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
K+F+E R KP++ N ++ C + V + E + G P+
Sbjct: 248 ---KIFKELIRRGC-------KPDLTLLNTYMD-CVFKAGEVEKGRMIFEDIRSYGFLPD 296
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
S+ L + G + + M + GF+ Y++++ G+ K G + A +
Sbjct: 297 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL- 355
Query: 316 LCLGGGNMEQS--DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG 373
M++ + TY +V G + + L EA+ GI ++ +
Sbjct: 356 -----EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS---KGIELNVVLYSS 407
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I +G D+A+ IL+EM G + + + L A K EA +
Sbjct: 408 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 467
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+ Y LI Q + AF ++DM++ + +Y T+++GL
Sbjct: 468 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL 517
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 2/138 (1%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + CK R EA +L + + Y+ +I ++ F+ A+ L +R
Sbjct: 21 YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLR 80
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
E S+ +I+T L + + + + + + +D E + +N II C GR+
Sbjct: 81 ERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD--AEPNSSTYNIIIDMLCLGGRV 138
Query: 526 EDAKRTLRRMIFLQFEPN 543
E+A R L M PN
Sbjct: 139 EEAYRILDEMEHASLFPN 156
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 137/635 (21%), Positives = 235/635 (37%), Gaps = 144/635 (22%)
Query: 71 LETNLHKSLL--TNNTDEAWKSFK----SLTANSLFPSKPVTNSLIAHLSSLQDNHNLKR 124
+E +L K+LL TNN AW+ FK S + S S T ++ L + + ++
Sbjct: 1 MEQSLVKALLKNTNNPRLAWRIFKRIFSSPSEESHGISLAATPTMACILVRAKMHEEIEE 60
Query: 125 AFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFL 184
++ + KL +V ++ + + A P F V+ F P L
Sbjct: 61 LHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQFVRSRFPEN--KPGIYLYNVL 118
Query: 185 VDIC--RKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEK 242
++ C + FV++L C I+ P Y N + C V A +
Sbjct: 119 LESCIRERRVEFVSWLYKDMVLCGIS---------PETYTFNLLIRALCDS-SCVDAARE 168
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+ + M G +PNE +FG L Y GL +K +EL + M FG V Y++++S +
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228
Query: 303 KLGNLESA--------------------SRTILLCLGG---------GNMEQSDF----- 328
+ G + + SR LC G +ME ++
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 329 -SKETYCEVVKGFLQNGNVKG-----------------------LANLIIEAQKLEPSGI 364
+ TY ++KGF + G ++ L L+ + +E +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348
Query: 365 V---VDRSVGFGIIS------ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC- 414
+ +D+ +G I S LG+ A +I+ M G S Y L YC
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCS 408
Query: 415 ----------------------------------KEHRTAEATQLVMDISSSGLQLDVGN 440
R +EA +L+ ++ G LD
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 441 YDALIEASITSQDFQSAFSLFRDMR---EARIYDLKGSYLTIM-TGLMENH-RPELM--A 493
+ +++ S + A + + MR A + +L SY+ ++ L+EN+ P+L+ +
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528
Query: 494 AFLDEVVEDPR-VEVKT--------------HDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
L+ + + R E KT +N IH FCK G++ A R L+ M
Sbjct: 529 TLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ +TY SLI G Q F + + E++ K
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREK 623
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 176/471 (37%), Gaps = 92/471 (19%)
Query: 182 GFLVDICRKNSNFVAFLK---------VFEECCRIALDENLDFMKPNIYACNAALEGCC- 231
G + DI NS A K +F + + LDE L +PN N L+G C
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSD---MELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 232 YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKIVELESLMNEF---G 286
GL + DA+ + E+ +R N+ +Y L+GL K +E E+++ + G
Sbjct: 304 VGL--LEDAKTLFES-----IRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKG 356
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNG 344
+ Y+ L+ G KLG L A +TI+ G M+++ S + TY ++ G+ G
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDA-KTIV-----GLMKRNGVSPDAVTYGCLLHGYCSVG 410
Query: 345 NVKGLANLIIEA--------------------------------QKLEPSGIVVDRSVGF 372
V +L+ E +K+ G +D
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCN 470
Query: 373 GIISACVNLGLSDKAHSILDEMNACG-----------------------CSVGLGVYVPT 409
I+ G DKA I+ M G C L Y
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
L CK R AEA L ++ LQ D Y+ I SAF + +DM +
Sbjct: 531 LNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+ +Y +++ GL ++ + +DE+ E + +N+ I C+ G++EDA
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMREKG-ISPNICTYNTAIQYLCEGGKVEDAT 649
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQK 580
L M+ PN ++ LI + + M + +S GQK
Sbjct: 650 NLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFD---MAQEVFETAVSICGQK 697
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 156/422 (36%), Gaps = 89/422 (21%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG------- 270
P+IY+ N ++G C L +SDA+ ++ M GV P+ ++G L + Y G
Sbjct: 359 PSIYSYNILMDGLCK-LGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKS 417
Query: 271 -LQE------------------------KIVELESL---MNEFGFSSQMVFYSSLISGYV 302
LQE +I E E L MNE G+ V + ++ G
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477
Query: 303 KLGNLESASRTI----------LLCLGGGNMEQSDFSKE---------TYCEVVKGFLQN 343
G L+ A + L LG + D S TY ++ G +
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 344 GNVKGLANLIIE--AQKLEPSGIVVDR-----------SVGFGII--------------- 375
G L E +KL+P + + S F ++
Sbjct: 538 GRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 376 -SACVNLGLSDKA---HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
S + LG+ ++ H ++DEM G S + Y ++ C+ + +AT L+ ++
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQ 657
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
+ +V ++ LI A DF A +F I K ++M + L
Sbjct: 658 KNIAPNVFSFKYLIGAFCKVPDFDMAQEVFE--TAVSICGQKEGLYSLMFNELLAAGQLL 715
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
A L E V D E+ T + ++ + CK LE A L +MI + + + +I
Sbjct: 716 KATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVI 775
Query: 552 NG 553
+G
Sbjct: 776 DG 777
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 161/380 (42%), Gaps = 25/380 (6%)
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
LG PN +F L L+G + VEL M ++ +++++G +
Sbjct: 154 LGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSE 213
Query: 310 ASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVD 367
A I + G + + F TY ++ ++GN +L+ +E +K++P VV
Sbjct: 214 AVDLIARMMANG-CQPNQF---TYGPILNRMCKSGNTASALDLLRKMEHRKIKPH--VVT 267
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
++ II G D A S EM G + Y + ++C R + QL+
Sbjct: 268 YTI---IIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLR 324
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
D+ + + +V + ALI++ + A L+ +M I +Y +++ GL +
Sbjct: 325 DMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDK 384
Query: 488 RPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
R + +D +V DP + +N +I+ FCKA +++D R R+M +
Sbjct: 385 RLDEANQMMDLMVSKGCDPDIWT----YNILINGFCKAKQVDDGMRLFRKMSLRGMIADT 440
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDA 604
TY +LI G+ + + ++ E+ +S GI L+D L G +
Sbjct: 441 VTYSTLIQGFCQSRKLIVAKKVFQEM---VSQGVHPGIMTYAILLD----GLCDNGELEE 493
Query: 605 VMQVVEKSQEMKVFVDKWKY 624
+ ++++ + K+ +D Y
Sbjct: 494 ALGILDQMHKCKMELDIGIY 513
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 119/580 (20%), Positives = 221/580 (38%), Gaps = 90/580 (15%)
Query: 63 LTQDN-ITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHN 121
LT D ++S + L L+ D+A F+S+ + P+ N L L+ + ++
Sbjct: 49 LTSDRKMSSYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTK-QYD 107
Query: 122 LKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWG 181
L A +E D T++ ++ AF+ + +FK Y +
Sbjct: 108 LVLALCKQ---MELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFN 164
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
L +C + F A V +C + L +++ P++ N + G C VS+A
Sbjct: 165 TLLNGLCLEGRVFEAVELV--DC--MVLSQHV----PDLITLNTIVNGLCLK-DRVSEAV 215
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
+I M G +PN+ ++G + G ++L M +V Y+ +I
Sbjct: 216 DLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNL 275
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIE--AQ 357
K G L+ A ME TY ++ F G A L+ + +
Sbjct: 276 CKDGRLDDALSFF------SEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITR 329
Query: 358 KLEPSGI----VVDRSVGFGIISACVNL---------------------GLS-----DKA 387
K+ P+ + ++D V G ++ +L GL D+A
Sbjct: 330 KITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEA 389
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ ++D M + GC + Y + +CK + + +L +S G+ D Y LI+
Sbjct: 390 NQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQG 449
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
S+ A +F++M ++ +Y ++ GL +N E LD+ + ++E+
Sbjct: 450 FCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQ-MHKCKMEL 508
Query: 508 KTHDWNSIIHAFCKAGRLEDA---------------------------KRT--------L 532
+N IIH C A +++DA KR+
Sbjct: 509 DIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALF 568
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
R+M +EP+ TY +LI ++ + + + E+KR
Sbjct: 569 RKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKR 608
>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
Length = 484
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 160/368 (43%), Gaps = 33/368 (8%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
E D + P+ N + G C Q + +A +V++ M RP S++ L Y + G
Sbjct: 78 EEEDGLAPDSVCFNTVINGWCNEGQ-MEEAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAG 136
Query: 271 LQEKIVEL---------ESLMNEFGFSS----QMVFYSSLISGYVKLGNLESASRTILLC 317
E+ +L S +E G + ++L++ + + G LE A R + +
Sbjct: 137 QAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLRTMNTLLNAWCREGRLEEAWRVVAMI 196
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ--KLEPSGIVVDRSVGFGII 375
G Q D TY + K + G V L +LI + + +L+P+ R+ I
Sbjct: 197 KSAGM--QPDAV--TYNTLAKAYAAAGRVAELEDLIADMKNARLKPN----LRTYAILIS 248
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI-SSSGL 434
C N G+ ++ +L + G + + LK Y +E+ ++V+D+ +++G+
Sbjct: 249 CYCQN-GMPERGLQLLSRLKFEGLHPDVVAFNTLLKGYSQENDQQLKLEMVLDLMAANGV 307
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+ DV Y ++ ++ A ++ +M++ R+ ++ + G + + R +
Sbjct: 308 RPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVKPDVRAFAILAKGYVRSGRTHEAES 367
Query: 495 FLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
L ++ P V V T +II +C GR++DA R L M+ PN T +L+
Sbjct: 368 LLQDMSLHGVAPNVVVYT----TIISGWCSMGRMDDALRVLELMLERGEAPNLNTVQTLV 423
Query: 552 NGYVTAEQ 559
G+ A Q
Sbjct: 424 WGFCEARQ 431
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 34/243 (13%)
Query: 251 GVRPNESSFGF-LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G RP+ + +A + A K + E L+ + E G + V ++++I+G+ G +E
Sbjct: 46 GHRPSVECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEE 105
Query: 310 ASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A R + M Q + + TY ++KG+ G+A +AQ+L +
Sbjct: 106 AMRVV------QEMRQKNCRPTTSTYNTLIKGY-------GVAGQAEQAQQLVLHLLNKT 152
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
R+ S GL A L MN L A+C+E R EA ++V
Sbjct: 153 RN------SPSSEDGLEPVARPNLRTMNT------------LLNAWCREGRLEEAWRVVA 194
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
I S+G+Q D Y+ L +A + L DM+ AR+ +Y +++ +N
Sbjct: 195 MIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRTYAILISCYCQNG 254
Query: 488 RPE 490
PE
Sbjct: 255 MPE 257
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 115/276 (41%), Gaps = 13/276 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ N L C + + +A +V+ + G++P+ ++ LA YA G ++
Sbjct: 167 RPNLRTMNTLLNAWCREGR-LEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAG---RVA 222
Query: 277 ELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
ELE L M + Y+ LIS Y + G E L L E +
Sbjct: 223 ELEDLIADMKNARLKPNLRTYAILISCYCQNGMPERG----LQLLSRLKFEGLHPDVVAF 278
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++KG+ Q + + ++++ + +G+ D + I++ + G++DKA +IL E
Sbjct: 279 NTLLKGYSQENDQQLKLEMVLDL--MAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLE 336
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + + K Y + RT EA L+ D+S G+ +V Y +I +
Sbjct: 337 MQQDRVKPDVRAFAILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGR 396
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
A + M E + T++ G E +P
Sbjct: 397 MDDALRVLELMLERGEAPNLNTVQTLVWGFCEARQP 432
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 17/167 (10%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISS-SGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y + E + +EA QL+ + GL D ++ +I + A + ++M
Sbjct: 54 YTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMRVVQEM 113
Query: 465 REARIYDLKGSYLTIMTGL----MENHRPELMAAFLDEVVEDP----------RVEVKTH 510
R+ +Y T++ G +L+ L++ P R ++T
Sbjct: 114 RQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLRTM 173
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
N++++A+C+ GRLE+A R + + +P+ TY +L Y A
Sbjct: 174 --NTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAA 218
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
Query: 484 MENHRP--ELMAAFLDEVVEDPRV--------EVKTHD--------WNSIIHAFCKAGRL 525
M+ HRP E + EVV + ++ +++ D +N++I+ +C G++
Sbjct: 44 MQGHRPSVECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQM 103
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
E+A R ++ M P TY +LI GY A Q
Sbjct: 104 EEAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQ 137
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 106/523 (20%), Positives = 200/523 (38%), Gaps = 53/523 (10%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQ 143
D AWK F + ++ L P S+I L + L A + +E+N +
Sbjct: 284 VDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCK---GNRLDEA-VEIFEQMEQNRNVPCAY 339
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
+T++ +A A++L++ K R +P + ++ K L+ FEE
Sbjct: 340 AYNTMIMGYGSAGKFDEAYSLLERQ-KARGCIPSVIAYNCILTCLGKKGRLGEALRTFEE 398
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
+ A PN+ N ++ C + V A KV + M G+ PN + +
Sbjct: 399 MKKDA--------APNLSTYNVLIDMLCKAGE-VEAAFKVRDAMKEAGLFPNVMTVNIMI 449
Query: 264 -YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
L K L E E MN S V + SLI G K G ++ A R L
Sbjct: 450 DRLCKAKKLDEACSIFEG-MNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDK 508
Query: 323 MEQSDFSKETYCEVVKGFLQNGN----------------------VKGLANLIIEA---- 356
+ + Y ++K F + G + + + +A
Sbjct: 509 IPNA----VVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETG 564
Query: 357 ------QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
++++ G + D +I V G + + + + M GC + Y +
Sbjct: 565 KGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFI 624
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
+CK + +A QL+ ++ + G Q V Y ++I+ A+ LF + + +
Sbjct: 625 DGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLE 684
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
Y +++ G + R + ++E+++ + + WN ++ A KA + +A
Sbjct: 685 LNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG-LTPNVYTWNCLLDALVKAEEINEALV 743
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ M L+ PN TY LING ++ + W E++++
Sbjct: 744 CFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQ 786
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 143/379 (37%), Gaps = 56/379 (14%)
Query: 218 PNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P++ A N L C G + + +A + E M PN S++ L + G E
Sbjct: 371 PSVIAYNCILT--CLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAF 427
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
++ M E G ++ + +I K L+ A G N + + T+C +
Sbjct: 428 KVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSI----FEGMNHKICSPDEVTFCSL 483
Query: 337 VKGFLQNGNVKGLANL---IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+ G + G V L ++++ K+ P+ +V +I + G + H I E
Sbjct: 484 IDGLGKQGRVDDAYRLYEQMLDSDKI-PNAVVYT-----SLIKSFFKCGRKEDGHKIFKE 537
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M GCS L + + K T + L +I S G DV +Y LI + +
Sbjct: 538 MIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGF 597
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ + LF M+E LD TH +N
Sbjct: 598 ARETYELFYAMKE-------------------------QGCVLD-----------THAYN 621
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ I FCK+G++ A + L M +P TY S+I+G ++ M++ E K
Sbjct: 622 TFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK-- 679
Query: 574 ISTDGQKGIKFEHNLVDAF 592
S + + +L+D F
Sbjct: 680 -SNGLELNVVIYSSLIDGF 697
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 82/206 (39%), Gaps = 8/206 (3%)
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
Q++ ++S +G LI + I S + F L + MR+ + +Y T++ L
Sbjct: 149 QILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGAL 208
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
++M + +++ EV H + ++I F + GRL+ A L M +
Sbjct: 209 SSVQESDIMLTLFHQ-MQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHAD 267
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFD 603
Y I+ + A + +HEIK G+ + + + L KG D
Sbjct: 268 IVLYNVCIDCFGKAGKVDMAWKFFHEIK-------SHGLLPDDVTYTSMIGVLCKGNRLD 320
Query: 604 AVMQVVEKSQEMKVFVDKWKYKQAFM 629
+++ E+ ++ + + Y M
Sbjct: 321 EAVEIFEQMEQNRNVPCAYAYNTMIM 346
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 151/396 (38%), Gaps = 51/396 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PNIY NA + G C + +V +AE + G+ P+ ++ L + +
Sbjct: 190 ISPNIYTFNAMVNGYC-KIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNA 248
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
E+ +M + G V Y++LI G + G + A + +D +++ C
Sbjct: 249 YEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLF-----------ADMTEDNCCP 297
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V+ + +I A G +A ++ +EM
Sbjct: 298 TVRTYTV-------------------------------LIYALSGSGRKVEALNLFNEMK 326
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC + Y + CKE++ EA +++ ++S GL V Y+ALI+
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
AF + M +Y ++ GL + + A L++++E ++ +NS+
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER-KLSPSLITYNSL 445
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
IH CK LE A R L M P+ TY I+ + ++ +K
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK---- 501
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
KG+K + A + K G D ++E+
Sbjct: 502 ---AKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 135/338 (39%), Gaps = 46/338 (13%)
Query: 218 PNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P++ NA ++G C G+ + DA ++++ M PN ++ L K K +
Sbjct: 367 PSVVTYNALIDGYCKEGM--IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L + M E S ++ Y+SLI G K+ +LESA R LL L N D + TY
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR--LLSLMNENGLVPD--QWTYSVF 480
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ + G V+ L ++ G+ + + +I +G D A+S+L+ M
Sbjct: 481 IDTLCKEGRVEEAGTLF---DSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN 537
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
C Y ++ CKE + EA+ LV + + G++ V Y LI + F
Sbjct: 538 DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDH 597
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A +F M ++P++ + + +
Sbjct: 598 ALKVFNHMVSL------------------GYQPDVCT------------------YTAFL 621
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
HA+ G LE+ + +M P+ TY LI+GY
Sbjct: 622 HAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 147/356 (41%), Gaps = 30/356 (8%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G PN ++ L + ++ ++ S M+E G +V Y++LI GY K G ++ A
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA 388
Query: 311 SRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVK---GLANLIIEAQKLEPSGIV 365
+ L ME + + TY E++ G + V L N ++E +KL PS I
Sbjct: 389 FEILDL------MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE-RKLSPSLIT 441
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+ +I + + A+ +L MN G Y + CKE R EA L
Sbjct: 442 YN-----SLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ + G++ + Y ALI+ A+SL M +Y ++ GL +
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+ + ++ + +++ V+ + +I K G + A + M+ L ++P+
Sbjct: 557 EKKMKEASSLVAKML-TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC 615
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
TY + ++ Y + M E+ I+ ++GI L D Y ++ G+
Sbjct: 616 TYTAFLHAYFSQG-------MLEEVDDVIAKMNEEGI-----LPDLVTYTVLIDGY 659
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 96/476 (20%), Positives = 183/476 (38%), Gaps = 110/476 (23%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEK--NPKLLDF 142
D+A++ + +NS P+ N LI L + H +A A + ++E+ +P L+
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVH---KAMALLNKMLERKLSPSLI-- 440
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKN----------- 191
T ++L+ N A+ L+ M +N + F+ +C++
Sbjct: 441 -TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499
Query: 192 -------SNFVAFLKVFEECCRI-------ALDENL--DFMKPNIYACNAALEGCCYGLQ 235
+N V + + + C++ +L E + D PN Y N +EG C +
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKE-K 558
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFL--------AYLYALK------------------ 269
+ +A ++ M +GV+P ++ L A+ +ALK
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618
Query: 270 ---------GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
G+ E++ ++ + MNE G +V Y+ LI GY +LG A + +
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678
Query: 321 G-------------NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
G N+ + KET E+ + N N +A+ V
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIAD--------------VW 724
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+++ + I A + ++M GC++ + +Y + +C++ R EA LV
Sbjct: 725 KTLEYEI------------ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVH 772
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+ G+ Y++L++ + A L M E + L SY ++ GL
Sbjct: 773 HMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGL 828
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 10/231 (4%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ YCK EA I +GL D Y +LI ++ +A+ +F M +
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGC 260
Query: 470 YDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
+ SY ++ GL E R E + F D ++ V+T + +I+A +GR +A
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRT--YTVLIYALSGSGRKVEA 318
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
M EPN TY LI+G + E ++ +S +KG+
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENK-------MDEARKMLSEMSEKGLIPSVVT 371
Query: 589 VDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAK 639
+A + K G D ++++ + + Y + KK KV K
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHK 422
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 145/369 (39%), Gaps = 44/369 (11%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ N+ + G C + + A +++ M+ G+ P++ ++ +G E+
Sbjct: 435 LSPSLITYNSLIHGQC-KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L + G + V Y++LI GY K+G ++ A + L + S TY
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNS----YTYNV 549
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+++G + +K ++L+ + + VV ++ +I + G D A + + M
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI---LIGEMLKDGAFDHALKVFNHMV 606
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ G + Y L AY + E ++ ++ G+ D+ Y LI+
Sbjct: 607 SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTH 666
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE-LMAAFLDEVVEDPRVEVKTHD--- 511
AF + M + K S L I++ L++N E M E+ D V + D
Sbjct: 667 RAFDFLKCMVDT---GCKPS-LYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIAD 722
Query: 512 ----------------------------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+ ++I FC+ RLE+A+ + M P+
Sbjct: 723 VWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPS 782
Query: 544 DQTYLSLIN 552
+ Y SL++
Sbjct: 783 EDIYNSLLD 791
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 177/415 (42%), Gaps = 46/415 (11%)
Query: 217 KPNIYACNAALEGCCYG--LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+PN + G C Q D +++E S +PN ++ + + G+ +
Sbjct: 175 EPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGST---KPNTRTYTIVIDAFCKDGMLDG 231
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
L + M + + YS+LI KL E+ RT+ L + N+ + T+
Sbjct: 232 ATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENV-RTLFLEMIHLNIYPNVC---TFN 287
Query: 335 EVVKGFLQNGNVKG---LANLIIEAQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSI 390
V+ G + G V+ + +IE + ++P I + + G+G+ G D+A I
Sbjct: 288 SVIDGLCKEGKVEDAEEIMRYMIE-KGVDPDVITYNMIIDGYGL------RGQVDRAREI 340
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
D M + Y + Y ++ + EA Q+ +IS GL+ + + L+
Sbjct: 341 FDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFE 400
Query: 451 SQDFQSAFSLFRDMREA-RIYDLKGSYLTIMTGLMENHR-PELMAAF--LDEVVEDPRVE 506
+SA + F +M A I DL ++ T++ G +N E M+ F L+ ED ++
Sbjct: 401 LGRTKSAQNFFDEMLSAGHIPDLY-THCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQ 459
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+ + ++I CK G+L+ A T ++ + P+ TY ++I+GY +L
Sbjct: 460 I----YTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE----GLLDE 511
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
++ RK+ +G L D Y ++ GF + K EMK F+++
Sbjct: 512 AKDMLRKMEDNG--------CLADNRTYNVIVRGFLRS-----NKVSEMKAFLEE 553
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 123/290 (42%), Gaps = 25/290 (8%)
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDK 386
+++ T+ +++G VK +L +KL I V +G +++ G + K
Sbjct: 140 YNEVTFTTLIRGLFAENKVKDAVHLF---KKLVRENICEPNEVMYGTVMNGLCKKGHTQK 196
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A +L M Y + A+CK+ AT L+ ++ + D+ Y LI+
Sbjct: 197 AFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLID 256
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DP 503
A +++ +LF +M IY ++ +++ GL + + E + ++E DP
Sbjct: 257 ALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDP 316
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
V +N II + G+++ A+ MI EP+ +Y LINGY ++
Sbjct: 317 DVIT----YNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEA 372
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG-------FFDAVM 606
+ + EI QKG+K + L+ L + G FFD ++
Sbjct: 373 MQVCREI-------SQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEML 415
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 142/328 (43%), Gaps = 56/328 (17%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N+ ++G C V DAE+++ M GV P+ ++ + Y L+G ++ E
Sbjct: 281 PNVCTFNSVIDGLCKE-GKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRARE 339
Query: 278 L-ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR------------TILLC------- 317
+ +S++N+ ++ Y+ LI+GY + ++ A + +I+ C
Sbjct: 340 IFDSMINK-SIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGL 398
Query: 318 --LGGGNMEQSDFSK----------ETYCEVVKGFLQNGNV-KGLANLIIEAQKLEPSGI 364
LG Q+ F + T+C ++ G+ +NG V + +++ ++ E + I
Sbjct: 399 FELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNI 458
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ +V G+ C N G DKAH+ +++ G + Y + YC+E EA
Sbjct: 459 QIYTAVIDGL---CKN-GKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKD 514
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
++ + +G D Y+ ++ +R ++ ++K ++L + G
Sbjct: 515 MLRKMEDNGCLADNRTYNVIVRGF---------------LRSNKVSEMK-AFLEEIAGKS 558
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ + +D + EDP + K H W
Sbjct: 559 FSFEAATVELLMDIIAEDPSITRKMH-W 585
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 156/396 (39%), Gaps = 51/396 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PNIY NA + G C + +V +AE + G+ P+ ++ L + +
Sbjct: 190 ISPNIYTFNAMVNGYC-KIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNA 248
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
E+ +M + G V Y++LI G + G + A + +D +++ C
Sbjct: 249 YEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLF-----------ADMTEDNCCP 297
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V+ + ++I A L SG R V +A ++ +EM
Sbjct: 298 TVRTY----------TVLIYA--LSGSG----RKV---------------EALNLFNEMK 326
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC + Y + CKE++ EA +++ ++S GL V Y+ALI+
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
AF + M +Y ++ GL + + A L++++E ++ +NS+
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER-KLSPSLITYNSL 445
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
IH CK LE A R L M P+ TY I+ + ++ +K
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK---- 501
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
KG+K + A + K G D ++E+
Sbjct: 502 ---AKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 135/338 (39%), Gaps = 46/338 (13%)
Query: 218 PNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P++ NA ++G C G+ + DA ++++ M PN ++ L K K +
Sbjct: 367 PSVVTYNALIDGYCKEGM--IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L + M E S ++ Y+SLI G K+ +LESA R LL L N D + TY
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR--LLSLMNENGLVPD--QWTYSVF 480
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ + G V+ L ++ G+ + + +I +G D A+S+L+ M
Sbjct: 481 IDTLCKEGRVEEAGTLF---DSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN 537
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
C Y ++ CKE + EA+ LV + + G++ V Y LI + F
Sbjct: 538 DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDH 597
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A +F M ++P++ + + +
Sbjct: 598 ALKVFNHMVSL------------------GYQPDVCT------------------YTAFL 621
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
HA+ G LE+ + +M P+ TY LI+GY
Sbjct: 622 HAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 113/543 (20%), Positives = 203/543 (37%), Gaps = 116/543 (21%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEK--NPKLLDF 142
D+A++ + +NS P+ N LI L + H +A A + ++E+ +P L+
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVH---KAMALLNKMLERKLSPSLI-- 440
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKN----------- 191
T ++L+ N A+ L+ M +N + F+ +C++
Sbjct: 441 -TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499
Query: 192 -------SNFVAFLKVFEECCRI-------ALDENL--DFMKPNIYACNAALEGCCYGLQ 235
+N V + + + C++ +L E + D PN Y N +EG C +
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKE-K 558
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFL--------AYLYALK------------------ 269
+ +A ++ M +GV+P ++ L A+ +ALK
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618
Query: 270 ---------GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
G+ E++ ++ + MNE G +V Y+ LI GY +LG A
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRA---------- 668
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
DF +K + G L + I + L + + GI S
Sbjct: 669 -----FDF--------LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNT 715
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
L + A + ++M GC++ + +Y + +C++ R EA LV + G+
Sbjct: 716 LEY-EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 774
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-MENHRPELMAAF---- 495
Y++L++ + A L M E + L SY ++ GL +E + A F
Sbjct: 775 YNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLL 834
Query: 496 -----LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
DEV W +I K +++ + M +PN TY L
Sbjct: 835 SCGYNYDEVA-----------WKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLL 883
Query: 551 ING 553
I G
Sbjct: 884 IEG 886
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 147/356 (41%), Gaps = 30/356 (8%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G PN ++ L + ++ ++ S M+E G +V Y++LI GY K G ++ A
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA 388
Query: 311 SRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVK---GLANLIIEAQKLEPSGIV 365
+ L ME + + TY E++ G + V L N ++E +KL PS I
Sbjct: 389 FEILDL------MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE-RKLSPSLIT 441
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+ +I + + A+ +L MN G Y + CKE R EA L
Sbjct: 442 YN-----SLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ + G++ + Y ALI+ A+SL M +Y ++ GL +
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+ + ++ + +++ V+ + +I K G + A + M+ L ++P+
Sbjct: 557 EKKMKEASSLVAKML-TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC 615
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
TY + ++ Y + M E+ I+ ++GI L D Y ++ G+
Sbjct: 616 TYTAFLHAYFSQG-------MLEEVDDVIAKMNEEGI-----LPDLVTYTVLIDGY 659
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 10/231 (4%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ YCK EA I +GL D Y +LI ++ +A+ +F M +
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGC 260
Query: 470 YDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
+ SY ++ GL E R E + F D ++ V+T + +I+A +GR +A
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRT--YTVLIYALSGSGRKVEA 318
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
M EPN TY LI+G + E ++ +S +KG+
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENK-------MDEARKMLSEMSEKGLIPSVVT 371
Query: 589 VDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAK 639
+A + K G D ++++ + + Y + KK KV K
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHK 422
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 143/372 (38%), Gaps = 90/372 (24%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+ NA + G C L+ V+ AE ++ M GV P+ +F L Y G EK
Sbjct: 400 IRPDHITYNALINGLCK-LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ S M + G S ++ + S
Sbjct: 459 FTVLSDMQQKGIKSDVISFGS--------------------------------------- 479
Query: 336 VVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
VVK F +NG + ++ + + + P+ V + II A + G +++A ++++
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN-----SIIDAYIESGDTEQALLLVEK 534
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G S + Y LK C+ + EA +L+ + + GL+ DV +Y+ +I A D
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A L ++M + I RP L +
Sbjct: 595 TDKALELLQEMNKYGI------------------RPTL------------------RTCH 618
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+++ A AGR+ D + ++M+ EP+ Y +++ YV E V + E+
Sbjct: 619 TLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMS-- 676
Query: 574 ISTDGQKGIKFE 585
+KGI F+
Sbjct: 677 -----EKGIAFD 683
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 145/371 (39%), Gaps = 82/371 (22%)
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
SDA KV + M +GV PN ++ + + G E L M G +V Y+ L
Sbjct: 211 SDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVL 270
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
+SG + G ++ +R ++ + +M F TY + G + G + + +L E+
Sbjct: 271 LSGLCRTGRMDE-TRALMDEMASHSMLPDGF---TYSILFDGLTRTGESQTMLSLFAESL 326
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
K G++ + A CS+ L CK+
Sbjct: 327 K---KGVM----------------------------LGAYTCSI-------LLNGLCKDG 348
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+ A+A Q+ + +GL Y+ LI +D + AF +F M+ I +Y
Sbjct: 349 KVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 408
Query: 478 TIMTGLMENHRPELMAAFLDEVVE------DPRVE------------------------- 506
++ GL + E++ D V+E DP VE
Sbjct: 409 ALINGLC---KLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465
Query: 507 ----VKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+K+ + S++ AFCK G++ +A L MI+ PN Q Y S+I+ Y+ +
Sbjct: 466 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDT 525
Query: 561 FSVLMMWHEIK 571
L++ ++K
Sbjct: 526 EQALLLVEKMK 536
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/397 (19%), Positives = 158/397 (39%), Gaps = 48/397 (12%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL----------- 262
D KPN+ N L G C + + +++ M+ + P+ ++ L
Sbjct: 258 DGPKPNVVTYNVLLSGLCR-TGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQ 316
Query: 263 -----------------AYLYAL-------KGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
AY ++ G K ++ ++ G V Y++LI
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLI 376
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEA 356
+GY ++ +L A C+ M+ + TY ++ G + V +L++E
Sbjct: 377 NGYCQVRDLRGA-----FCI-FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME- 429
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+E SG+ +I A G +K ++L +M G + + +KA+CK
Sbjct: 430 --MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN 487
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+ EA ++ D+ + + Y+++I+A I S D + A L M+ + + +Y
Sbjct: 488 GKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTY 547
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
++ GL + + + A L + + + +N+II A C G + A L+ M
Sbjct: 548 NLLLKGLCRSSQID-EAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 606
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
P +T +L++ +A + + ++ ++ K
Sbjct: 607 KYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHK 643
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 10/175 (5%)
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
D +Y+ +I S A +F +M + + + +Y T++ G ++ E
Sbjct: 193 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLR 252
Query: 497 DEVVED-PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
D+++ D P+ V T +N ++ C+ GR+++ + + M P+ TY L +G
Sbjct: 253 DQMLHDGPKPNVVT--YNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLT 310
Query: 556 TAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
+ ++L ++ E + KG+ L L K G QV E
Sbjct: 311 RTGESQTMLSLFAESLK-------KGVMLGAYTCSILLNGLCKDGKVAKAKQVFE 358
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 158/415 (38%), Gaps = 62/415 (14%)
Query: 198 LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNES 257
+ VF+ CR D ++P+++ N + C +S+ +A K+ ++M G +PN +
Sbjct: 293 IGVFKRMCR-------DGVEPDVFTYNTLMGYLCKNGRSM-EARKIFDSMVKRGHKPNSA 344
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
++G L + YA +G K+ L +M G ++ LI Y K G ++ A +L
Sbjct: 345 TYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDA----MLL 400
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
+ + TY V+ G V + + + +L G+ D V +I
Sbjct: 401 FSKMRRQGLNPDTVTYGIVMDALCMVGKVD---DAMAQFGRLISEGLTPDAVVFRNLIHG 457
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
DKA + EM G + L CKE A A + + +Q D
Sbjct: 458 LCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRD 517
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
V Y+ LI+ A L M ++ G+ N
Sbjct: 518 VITYNTLIDGYCLHGKVDEAAKLLEGM--------------VLDGVKPN----------- 552
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
EV +N++I+ +CK GR+EDA R+M P TY +++ G A
Sbjct: 553 EVT-----------YNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQA 601
Query: 558 EQYFSV--LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
+ + L +W + GIKF+ + L L + D +++ +
Sbjct: 602 RRTAAAKELYLWMI---------KSGIKFDIGTYNIILLGLCQNNCTDDALRIFQ 647
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 14/228 (6%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD-ISSS 432
+I C +G D A + L + G + + P LKA C + RT+EA + + +
Sbjct: 97 VIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVL 156
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG-------SYLTIMTGLME 485
G +V +Y L++ Q A L M A D +G SY T++ GL+
Sbjct: 157 GCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVAD--DTRGGYPPDVVSYNTVINGLLR 214
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
R A L + + D + +NSII A KA ++ A L RM+ PN
Sbjct: 215 EGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRI 274
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
T+ SL++GY ++ + + ++ +++ DG + F +N + +L
Sbjct: 275 THNSLLHGYCSSGKPNDAIGVF----KRMCRDGVEPDVFTYNTLMGYL 318
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 105/275 (38%), Gaps = 49/275 (17%)
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA-----TQLVMDISSSGLQLDVGNYDALI 445
L M GC+ + Y LK C E+R+ +A T +V D + G DV +Y+ +I
Sbjct: 150 LRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVI 209
Query: 446 EASIT-SQDFQSAFSLFRDM-------------------REARIYDLKGSYLTIMT--GL 483
+ + +A+ LF M +AR D L M G
Sbjct: 210 NGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGA 269
Query: 484 MENH--------------RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
M N +P + D VE +N+++ CK GR +A+
Sbjct: 270 MPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDG-VEPDVFTYNTLMGYLCKNGRSMEAR 328
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
+ M+ +PN TY +L++GY T S++ M H + + + GI+ +H +
Sbjct: 329 KIFDSMVKRGHKPNSATYGTLLHGYATEG---SLVKMHHLLDMMV----RNGIQPDHYIF 381
Query: 590 DAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ + K G D M + K + + D Y
Sbjct: 382 NILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTY 416
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 111/525 (21%), Positives = 208/525 (39%), Gaps = 33/525 (6%)
Query: 28 PSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTLTQDNIT--SLETNLHKSLLTNNTD 85
P + S+ I L R+ Q D Q Q L+ D +T S+ + L K+ D
Sbjct: 200 PDVVSY-NTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKA---RAMD 255
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLI-AHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
+A + N P++ NSL+ + SS + N + V + ++ D T
Sbjct: 256 KAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAI-----GVFKRMCRDGVEPDVFT 310
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
+TL+G + + A + M K R P G L+ + V + +
Sbjct: 311 YNTLMGYLCKNGRSMEARKIFDSMVK-RGHKPNSATYGTLLHGYATEGSLVKMHHLLDMM 369
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
R + ++P+ Y N L G V DA + M G+ P+ ++G +
Sbjct: 370 VR-------NGIQPDHYIFNI-LIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMD 421
Query: 265 LYALKG-LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+ G + + + + L++E G + V + +LI G + A + +G G
Sbjct: 422 ALCMVGKVDDAMAQFGRLISE-GLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGIC 480
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ F + ++ + G V N+ +++ V+ + +I G
Sbjct: 481 PNNIF----FNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNT---LIDGYCLHGK 533
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
D+A +L+ M G Y + YCK R +A L ++S G+ + Y
Sbjct: 534 VDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYST 593
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH-RPELMAAFLDEVVED 502
+++ ++ +A L+ M ++ I G+Y I+ GL +N+ + + F + + D
Sbjct: 594 ILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLID 653
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+E +T +N +I A K GR ++AK ++ PN TY
Sbjct: 654 FHLENRT--FNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTY 696
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 147/379 (38%), Gaps = 16/379 (4%)
Query: 181 GGFLVDICRKNSNFVAFLKVFE--ECCRIALDENLD-FMKPNIYACNAALEGCCYGLQSV 237
GG+ D+ N+ L+ + D+ LD + P++ N+ + +++
Sbjct: 196 GGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKA-RAM 254
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
A V+ M G PN + L + Y G + + M G + Y++L
Sbjct: 255 DKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTL 314
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
+ K G A + + G+ S TY ++ G+ G++ + +L+
Sbjct: 315 MGYLCKNGRSMEARKIFDSMVKRGHKPNS----ATYGTLLHGYATEGSLVKMHHLL---D 367
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ +GI D + +I G D A + +M G + Y + A C
Sbjct: 368 MMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVG 427
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+ +A + S GL D + LI + A L +M I +
Sbjct: 428 KVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFN 487
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAKRTLRRM 535
T++ L + D +V RV+V+ +N++I +C G++++A + L M
Sbjct: 488 TLLNHLCKEGMVARAKNIFDLMV---RVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGM 544
Query: 536 IFLQFEPNDQTYLSLINGY 554
+ +PN+ TY ++INGY
Sbjct: 545 VLDGVKPNEVTYNTMINGY 563
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 135/336 (40%), Gaps = 13/336 (3%)
Query: 220 IYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELE 279
+Y+ N + C L V A V M LG++P+ +F L +G + VEL
Sbjct: 128 VYSLNILINCLCR-LNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELY 186
Query: 280 SLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVV 337
+ M G ++ Y++LI+G GN A MEQ+ TY ++
Sbjct: 187 NEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVF------KKMEQNGCKPNVVTYNTII 240
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
++ V + + E + GI D I+ LG ++A + M
Sbjct: 241 DSLCKDRLVNDAMDFLSE---MVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQN 297
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC + Y + + K+ +A + ++ G+ DV Y ++ A
Sbjct: 298 GCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEA 357
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
LF+ M + +Y TI+ L ++ FL E+V D + +++I+H
Sbjct: 358 IRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMV-DRGIPPNAVTYSTILH 416
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
FC G+L++A + + M+ PN T+ L++G
Sbjct: 417 GFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDG 452
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 184/467 (39%), Gaps = 80/467 (17%)
Query: 193 NFVAFLKVFEECCRIAL-DENLDFMK--------PNIYACNAALEG-CCYGLQSVSDAEK 242
N V + + + C+ L ++ +DF+ P+ N+ + G CC G +++A +
Sbjct: 232 NVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLG--QLNEATR 289
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+ + M G +P+ ++ + L + S M + G +V Y++++ G
Sbjct: 290 LFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLC 349
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEAQKLE 360
LG L A R MEQ + Y ++ ++ V + E +
Sbjct: 350 YLGQLNEAIRLF------KKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSE---MV 400
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK------AYC 414
GI + I+ NLG D+A + EM VG V TL C
Sbjct: 401 DRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM------VGRNVMPNTLTFSILVDGLC 454
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+E +EA + ++ G++ ++ Y+AL+ + + L M EAR
Sbjct: 455 QEGMVSEARWVFETMTEKGVEPNIYTYNALM----------NGYCLRCKMNEAR------ 498
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
IM G + P+L H +N +I+ +C + R++ AK L +
Sbjct: 499 KVFEIMVG--KGCAPDL------------------HSYNILINGYCNSRRMDKAKALLTQ 538
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY 594
M + PN TY +++ G Y L+ E+ +K+ + G ++++ L
Sbjct: 539 MSVKKLTPNTVTYNTIMKGLC----YVGRLLDAQELFKKMCSSGMLPTLMTYSIL---LN 591
Query: 595 ALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAF--MENHKKLKVAK 639
L K G D +++ + +E K+ D Y M KL+VAK
Sbjct: 592 GLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAK 638
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 154/401 (38%), Gaps = 51/401 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ L G CY L +++A ++ + M G +P+ ++ + L
Sbjct: 334 IPPDVVTYTTILHGLCY-LGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDA 392
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+E S M + G V YS+++ G+ LG L+ A++ +G M + T+
Sbjct: 393 MEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNT----LTFSI 448
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+V G Q G V +A + + M
Sbjct: 449 LVDGLCQEGMV--------------------------------------SEARWVFETMT 470
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y + YC + EA ++ + G D+ +Y+ LI S+
Sbjct: 471 EKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMD 530
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A +L M ++ +Y TIM GL R L A L + + + ++ +
Sbjct: 531 KAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGR-LLDAQELFKKMCSSGMLPTLMTYSIL 589
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
++ CK G L++A + + M + EP+ Y LI G + L + + K+S
Sbjct: 590 LNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGK----LEVAKGLFSKLS 645
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMK 616
DG + +N++ + L+K G D ++ K + MK
Sbjct: 646 ADGIQPPGRTYNVM---IKGLLKEGLSDEAYELFRKWKMMK 683
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 133/322 (41%), Gaps = 18/322 (5%)
Query: 236 SVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
SV DA M+ + RP+ FG FL + +K +V L + M+ FG + +
Sbjct: 73 SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQ-YSTVVYLCNQMDLFGVTHTVYSL 131
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANL 352
+ LI+ +L +++ A G M + + T+ ++ G G +K L
Sbjct: 132 NILINCLCRLNHVDFAVSV------WGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVEL 185
Query: 353 IIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
E + EP I + +I+ N G ++ A + +M GC + Y +
Sbjct: 186 YNEMVRSGHEPDVISYNT-----LINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTII 240
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
+ CK+ +A + ++ G+ D Y++++ A LF+ M +
Sbjct: 241 DSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCK 300
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+Y I+ L ++ A FL E+V D + + +I+H C G+L +A R
Sbjct: 301 PDVVTYNIIIDSLYKDRLVNDAADFLSEMV-DQGIPPDVVTYTTILHGLCYLGQLNEAIR 359
Query: 531 TLRRMIFLQFEPNDQTYLSLIN 552
++M +P+ Y ++I+
Sbjct: 360 LFKKMEQKGCKPDVVAYNTIID 381
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 149/368 (40%), Gaps = 46/368 (12%)
Query: 206 RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
RI + L+ ++ + + + G C Q +++A ++ M G P+ ++ L
Sbjct: 77 RIYRPKLLNSQDTDVISYSRKINGLCKKGQ-IAEAMEIFREMEEKGSAPDSFTYNILING 135
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
E V L M GFS +V Y++LI G+ G +++A + ME
Sbjct: 136 LCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDIL------DEMEH 189
Query: 326 SDFSKET--YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ T Y +++G G V+ A L+++ KL + + +I GL
Sbjct: 190 RGITPNTVTYTALIQGLCDCGEVE-RAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGL 248
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
+ LDEM GC Y + C++ EA L+ ++ + G +LDV Y++
Sbjct: 249 FEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNS 308
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI+ + A RE +I L + G+ P++
Sbjct: 309 LIDGLCKMGELDFA-------REMQI-------LMVEKGVA----PDVFT---------- 340
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+ S+I C AG L++A ++ M PN TY +LING+ A++
Sbjct: 341 --------YTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHA 392
Query: 564 LMMWHEIK 571
L + +E+K
Sbjct: 393 LQLVNEMK 400
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 113/289 (39%), Gaps = 14/289 (4%)
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNV 346
+ ++ YS I+G K G + A ME+ + + TY ++ G ++ +
Sbjct: 89 TDVISYSRKINGLCKKGQIAEAMEIFR------EMEEKGSAPDSFTYNILINGLCKDAQL 142
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
+ +L+ E Q S VV + +I G D A ILDEM G + Y
Sbjct: 143 EMGVSLMDEMQARGFSPTVVTYTT---LIHGFCTAGRVDAAMDILDEMEHRGITPNTVTY 199
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQL--DVGNYDALIEASITSQDFQSAFSLFRDM 464
++ C A ++ ++ G + +V Y LI F+ +M
Sbjct: 200 TALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEM 259
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
+ + +Y ++ GL + A L+E+V E+ +NS+I CK G
Sbjct: 260 IISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVA-IGCELDVVIYNSLIDGLCKMGE 318
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
L+ A+ M+ P+ TY SLI G A L + E++ K
Sbjct: 319 LDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAK 367
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 89/236 (37%), Gaps = 63/236 (26%)
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGF 261
ECC PN+ + G C GL + + ++ M + G PN +++
Sbjct: 228 ECC------------PNVVTYTQLIHGLCQKGLFEM--GMEFLDEMIISGCFPNNATYTA 273
Query: 262 LAYLYALKGLQEKIVELESLMNE---FGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
L + KG +E L+NE G +V Y+SLI G K+G L
Sbjct: 274 LIHGLCQKG---SFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGEL----------- 319
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
DF++E + L++E G+ D +I
Sbjct: 320 --------DFARE-----------------MQILMVE------KGVAPDVFTYTSLIQGL 348
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
+ GL D+A ++ EM A G Y + + + RT A QLV ++ S+GL
Sbjct: 349 CDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGL 404
>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 150/378 (39%), Gaps = 42/378 (11%)
Query: 198 LKVFEECCRIALDENLDFMKP-------------NIYACNAALEGCCYGLQSVSDAEKVI 244
LK+F + + E++D + + Y ++G C + DA K++
Sbjct: 46 LKIFNSILDVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCL-TNRIGDAFKLL 104
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
+ M G PN + + + G K+ SLMNE S + F + LIS Y +
Sbjct: 105 QVMKSRGKTPNTVIYNTMIHALCKNG---KVGRARSLMNEMVEPSDVTF-NVLISAYCQE 160
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKE------TYCEVVKGFLQNGNVKGLANLIIEAQK 358
NL A +LL + FS T +VV + G V ++ ++
Sbjct: 161 ENLVQA--LVLL--------EKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVL---ER 207
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+E G VVD +I LG + H +L +M GC + Y YC
Sbjct: 208 VESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGM 267
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR--IYDLKGSY 476
A L D+ + G+ + YD LI + + F + M E+R Y
Sbjct: 268 LDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPY 327
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+I+ GL + ++ E FL ++ ++ + D + I FC G + DAKR +MI
Sbjct: 328 NSIIYGLYKKNQFEEALEFLTKM---EKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMI 384
Query: 537 FLQFEPNDQTYLSLINGY 554
P+ Y+ LI+G+
Sbjct: 385 KEGGVPSVLVYVCLIHGF 402
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 170/429 (39%), Gaps = 67/429 (15%)
Query: 80 LTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL 139
LTN +A+K + + + P+ + N++I +L N + RA + + ++E +
Sbjct: 93 LTNRIGDAFKLLQVMKSRGKTPNTVIYNTMI---HALCKNGKVGRARSLMNEMVEPSD-- 147
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLK 199
T + L+ + A L++ F + F+P + +V I K ++
Sbjct: 148 ---VTFNVLISAYCQEENLVQALVLLEKSF-SMGFVPDVVTATKVVGILCKAGRVTEGVE 203
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
V E E++ + ++ A N ++G C L +V++ M + G PN ++
Sbjct: 204 VLERV------ESMGGVV-DVVAYNTLIKGFCM-LGKAKVGHRVLKDMEIKGCLPNVDTY 255
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
LA Y G+ + ++L + M G + + Y +LI G G +E + + L
Sbjct: 256 NILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILEL--- 312
Query: 320 GGNMEQSDFSK----ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGII 375
ME+S Y ++ G + + + + +KL P VDRS+ I+
Sbjct: 313 ---MEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPR--AVDRSLR--IL 365
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYV---------------------------- 407
C N G A + D+M G + VYV
Sbjct: 366 GFC-NEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYF 424
Query: 408 ---PT----LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
PT + A+C + + A +L+ D+ G D+G+Y +++A DFQ A L
Sbjct: 425 PTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRL 484
Query: 461 FRDMREARI 469
F M E I
Sbjct: 485 FLQMVEKDI 493
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 141/379 (37%), Gaps = 74/379 (19%)
Query: 248 SVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL 307
S +G P+ES F + + +++++ L+ +FG + + ++S++ VK
Sbjct: 3 SSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVK---- 58
Query: 308 ESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
E D ++E Y K + NG V G D
Sbjct: 59 ----------------EDIDLAREFY---RKKMMMNG-VSG-----------------DD 81
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+ G + C+ + D A +L M + G + +Y + A CK + A L+
Sbjct: 82 YTFGILMKGLCLTNRIGD-AFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMN 140
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD----------MREARIYDLKGSYL 477
++ DV ++ LI A ++ A L + ++ +
Sbjct: 141 EMVEPS---DV-TFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAG 196
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
+ G+ R E M +D V +N++I FC G+ + R L+ M
Sbjct: 197 RVTEGVEVLERVESMGGVVDVVA-----------YNTLIKGFCMLGKAKVGHRVLKDMEI 245
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALV 597
PN TY L +GY + S + +++++K TD GI + D + L
Sbjct: 246 KGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMK----TD---GINWNFMTYDTLIRGLC 298
Query: 598 KGGFFDAVMQVVEKSQEMK 616
GG + +++E +E +
Sbjct: 299 SGGRMEDGFKILELMEESR 317
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 150/371 (40%), Gaps = 51/371 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ Y N L+G C+ Q +AE+++ M PNE +F + GL ++
Sbjct: 215 VAPDTYTYNTVLKGLCFAKQ-WEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRA 273
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR---TIL--------------LCL 318
VEL M ++G +V YS+L++G+ + G ++ A + T+L LC+
Sbjct: 274 VELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCI 333
Query: 319 GGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLIIEA-QKLEPSGIVV 366
G E + E T+ ++ QN LA IE ++++ G +
Sbjct: 334 AGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQN----RLAEYAIEVLEQMQKYGYMP 389
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D IIS +D A +L+ M C + LK C+ R +A +L+
Sbjct: 390 DVVSYNTIISCFSEQACADDALKLLNSM---LCKPDTISFNAVLKCLCRAERWYDAAELM 446
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ + ++ LI++ + + A +F M + R +Y +++ G E
Sbjct: 447 AKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQ 506
Query: 487 HRPELMAAFLDEVVED-----PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
LD+V D P +N+ + C A R +DA + M+
Sbjct: 507 G--------LDKVAFDLFRSMP-CRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCL 557
Query: 542 PNDQTYLSLIN 552
PN+ T+ LIN
Sbjct: 558 PNEVTFNILIN 568
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 139/362 (38%), Gaps = 41/362 (11%)
Query: 215 FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+PN NAAL+G C + ++I M PN+++F L L E
Sbjct: 316 LCRPNTVCYNAALKGLCIA-GRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEY 374
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR---------------TILLCLG 319
+E+ M ++G+ +V Y+++IS + + + A + +L CL
Sbjct: 375 AIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCKPDTISFNAVLKCLC 434
Query: 320 GGNM-------------EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
E ++ T+ ++ QNG VK IE +L P
Sbjct: 435 RAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKD----AIEMFELMPKYRCT 490
Query: 367 DRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
V + +I+ GL A + M C + Y TLK C R +A +L
Sbjct: 491 PDIVTYSSLINGFSEQGLDKVAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGEL 547
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ D+ + + ++ LI + A ++ M + I +Y ++ G E
Sbjct: 548 IADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSE 607
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+ FL + +P T +NSI+ C+A R +DA++ + M+ PN+
Sbjct: 608 QGCLDDALKFLSTMPCEP----DTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEV 663
Query: 546 TY 547
T+
Sbjct: 664 TF 665
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 167/387 (43%), Gaps = 52/387 (13%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+ + V + M GVRPN S+ L YA G+ + +E L+ + G +V Y+SL+
Sbjct: 348 NCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLL 407
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
+ Y G Q + ++E + E+ K + V N +I+A
Sbjct: 408 NAY-------------------GRSAQPEKAREVFNEMRKNACKPNKVS--YNALIDA-- 444
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+G + G+ +A S+L EM G + + + TL C +
Sbjct: 445 -------------YG------SAGMLKEAISLLHEMEQDGIQPDV-ISISTLLTACGRCK 484
Query: 419 TAEATQLVMDISSS-GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+++ + S G+QL+ Y++ I + ++ D++ A L+ MR + +Y
Sbjct: 485 QLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYN 544
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
+++G + R F ++++ D + + ++S+I ++ K G+L +A T M
Sbjct: 545 ILISGSCKLGRYVESLKFFEDML-DLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKE 603
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALV 597
P+ TY +LI Y + ++ E++ G + + + + + AL
Sbjct: 604 TGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEME-------NNGTQPDAIVCSSLMEALN 656
Query: 598 KGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KGG + V+Q++E ++ K+ +++ Y
Sbjct: 657 KGGQPERVLQLIEFMKQKKIQLNQKAY 683
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 9/204 (4%)
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
H A+A V++ + + N+ LI S + A +FR M+ Y +
Sbjct: 98 HADADAVDAVLNCWAG--RFARRNFPLLIREIAISGSLKHAVHVFRWMKNQENYCARNDI 155
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+M L H A L +++ R + T +NS+IHA +AG+ A + M
Sbjct: 156 YGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQ 215
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYAL 596
P+ TY ++IN A + L E+ +K++ +G HN+V L A
Sbjct: 216 RAAIPPSRTTYNNVINACGAAGNWKKAL----ELCKKMTENGVGPDLITHNIV---LSAF 268
Query: 597 VKGGFFDAVMQVVEKSQEMKVFVD 620
G + + E + KV D
Sbjct: 269 KNGAQYSKAIAYFEIMKSSKVAPD 292
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 140/353 (39%), Gaps = 38/353 (10%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSD-AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
++P+I + + L YG + + A +V M +PN+ S+ L Y G+ ++
Sbjct: 396 LRPDIVSYTSLLNA--YGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKE 453
Query: 275 IVELESLMNEFGFSSQMVFYSSLISG------YVKLGNLESASRTILLCLG--------G 320
+ L M + G ++ S+L++ K+ + +A+++ + L G
Sbjct: 454 AISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIG 513
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLA---NLIIEA--------------QKLEPSG 363
+ D+ K V+ ++ GNVK A N++I + +
Sbjct: 514 SYLSLGDYKKAL---VLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLN 570
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
I + + V +I + V G +A S + M GC + Y +KAY + A
Sbjct: 571 IHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAW 630
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
L ++ ++G Q D +L+EA + L M++ +I + +Y I++
Sbjct: 631 DLFKEMENNGTQPDAIVCSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSC 690
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
R A+ + E ++ + N I++ K GR E + +M+
Sbjct: 691 TM-LRDWKTASQIIEHLDSSLSSISFGTLNHILNFLGKCGRTESMMKLFYKMV 742
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 146/358 (40%), Gaps = 50/358 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY-LYALKGLQEK 274
+ PNIY + + C+ L V A V+ + LG +P+ ++F L +Y + E
Sbjct: 92 IPPNIYTLHILINSFCH-LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEA 150
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET-- 332
+ + ++ E GF +V Y +LI+G K+GN +A R + G+M Q +
Sbjct: 151 LHLFDKMIGE-GFRPDVVTYGTLINGLCKVGNTSAAIRLL------GSMVQKNCQPNVFA 203
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++ ++ V NL E + GI D +I A NL ++L+
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSE---MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 260
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM + + + A CKE + EA +V + G++ +V Y AL++
Sbjct: 261 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLS 320
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A +F M + G M N V+ +
Sbjct: 321 EMDEAVKVFDTM--------------VCKGCMPN------------VIS----------Y 344
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
N++I+ +CK R++ A M + P+ TY +LI+G E+ + ++HE+
Sbjct: 345 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 402
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 142/327 (43%), Gaps = 10/327 (3%)
Query: 249 VLGVRPNESSFGFLAYLYALKGLQEK--IVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
+L ++P S+ F L ++ ++ ++ L M+ FG + LI+ + L
Sbjct: 52 MLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNR 111
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
+ A + L G+ Q D + T+ +++G G + +L K+ G
Sbjct: 112 VGFAFSVLAKILKLGH--QPDTA--TFTTLIRGIYVEGKIGEALHLF---DKMIGEGFRP 164
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D +I+ +G + A +L M C + Y + + CK+ + EA L
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
++ + G+ D+ Y++LI A +++ +L +M +++I S+ T++ L +
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ +D++++ VE + +++ C +++A + M+ PN +
Sbjct: 285 GKVTEAHDVVDKMIQRG-VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVIS 343
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRK 573
Y +LINGY ++ + ++ E+ R+
Sbjct: 344 YNTLINGYCKIQRIDKAMYLFGEMCRQ 370
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 157/412 (38%), Gaps = 59/412 (14%)
Query: 148 LLGSMRNANTAAPAFA---LVKCMFKNRYFM-PFELWG-----GFLVDICRKNSNFVAFL 198
LLGSM N FA ++ + K+R F L+ G DI NS A
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 247
Query: 199 KVFE-ECCRIALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
+ E + L+E +D + P++ + N ++ C V++A V++ M GV PN
Sbjct: 248 NLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE-GKVTEAHDVVDKMIQRGVEPNV 306
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
++ L + L ++ V++ M G ++ Y++LI+GY K+ ++ A
Sbjct: 307 VTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF-- 364
Query: 317 CLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
G M + + +T Y ++ G + ++L+
Sbjct: 365 ----GEMCRQELIPDTVTYSTLIHG-------------LCHVERLQ-------------- 393
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
A ++ EM AC L Y L CK AEA L+ I S L
Sbjct: 394 -----------DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 442
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
D+ + I+ + + ++A LF ++ + +Y ++ GL + +
Sbjct: 443 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 502
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
E+ E+ + +N+I F + A + L+ M+ F + T
Sbjct: 503 LFREMDENG-CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST 553
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 182/467 (38%), Gaps = 61/467 (13%)
Query: 209 LDENLDF--MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
L + ++F +KPN+ CN + C L + A V + +G P+ +F L+
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFC-QLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGL 165
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
LKG ++ + GF + Y +LI G K+G E+ + LL GN+ Q
Sbjct: 166 CLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVG--ETRAALDLLQRVDGNLVQP 223
Query: 327 D-----------------------FSKE----------TYCEVVKGFLQNGNVKGLANLI 353
+ FS+ TY ++ GF G +K +L
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLF 283
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
K+ I D +++A G + ++ D M G Y + Y
Sbjct: 284 ---NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C +A + ++ G+ D+ +Y +I + F A +LF++M I
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y +++ GL ++ R +D+ + D V +NSI+ A CK +++ A L
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQ-MHDRGVPPNICTYNSILDALCKTHQVDKAIALLT 459
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTD-GQKGIKFEHNLVDAF 592
+ F+P+ TY LI G + + E RK+ D KG +NL D +
Sbjct: 460 KFKDKGFQPDISTYSILIKGLCQSGKL--------EDARKVFEDLLVKG----YNL-DVY 506
Query: 593 LYALVKGGF-----FDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKK 634
Y ++ GF F+ + ++ K ++ D Y+ + KK
Sbjct: 507 AYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKK 553
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 143/355 (40%), Gaps = 22/355 (6%)
Query: 193 NFVAFLKVFEECCRIAL-DENLDF--------MKPNIYACNAALEGCCYGLQSVSDAEKV 243
N V + + + C++ L +E D + P++ +A + G C L + DA +
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCI-LGKLKDAIDL 282
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
M + ++P+ +F L + G ++ + +M + G V Y+SL+ GY
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
+ + A ++I + G + ++Y ++ GF + NL E +
Sbjct: 343 VKEVNKA-KSIFNTMAQGGVNPD---IQSYSIMINGFCKIKKFDEAMNLFKEMHR---KN 395
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
I+ D +I G A ++D+M+ G + Y L A CK H+ +A
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAI 455
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG- 482
L+ G Q D+ Y LI+ S + A +F D+ + Y+L TIM
Sbjct: 456 ALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLL-VKGYNLDVYAYTIMIQG 514
Query: 483 -LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+E E +A L +ED + II + K + A++ LR MI
Sbjct: 515 FCVEGLFNEALA--LLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMI 567
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 156/377 (41%), Gaps = 53/377 (14%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V+ A+++ ET G +F L Y GL E+ + + + M E+G +V Y++
Sbjct: 249 VTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNA 308
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
+I G G ME + +V K F
Sbjct: 309 VID-----------------ACGKGGME--------FKQVAKFF---------------- 327
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+++ + + DR +++ C GL + A ++ DEM+ + Y L A CK
Sbjct: 328 DEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKG 387
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+ A +++ + + + +V +Y +I+ + F A +LF +MR I + SY
Sbjct: 388 GQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSY 447
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAKRTLRR 534
T+++ + R E LD + E V +K +N+++ + K G+ ++ K+
Sbjct: 448 NTLLSIYTKVGRSE---EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAE 504
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY 594
M PN TY +LI+GY Y + ++ E K G++ + L A +
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFK-------SAGLRADVVLYSALID 557
Query: 595 ALVKGGFFDAVMQVVEK 611
AL K G + + ++++
Sbjct: 558 ALCKNGLVGSAVSLIDE 574
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 131/311 (42%), Gaps = 8/311 (2%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN+ NA ++ C G K + M V+P+ +F L + + GL E
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L M+ + Y++L+ K G ++ A IL + + + S Y
Sbjct: 359 RNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFE-ILAQMPAKRIMPNVVS---YST 414
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V+ GF + G NL E + L I +DR ++S +G S++A IL EM
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLN---IALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ G + Y L Y K+ + E ++ ++ + ++ Y LI+ ++
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A +FR+ + A + Y ++ L +N + +DE+ ++ + +NSI
Sbjct: 532 EAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSI 590
Query: 516 IHAFCKAGRLE 526
I AF ++ +E
Sbjct: 591 IDAFGRSATME 601
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 167/411 (40%), Gaps = 61/411 (14%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
+I + NA L+G C + D E++++ M + PN +F L GL E++ E+
Sbjct: 215 DIVSYNAVLKGLCMA-KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC--EV 336
+ M+E G + + Y+++I G K G+LE A+ + M C V
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL------NRMPSYGLKPNVVCYNTV 327
Query: 337 VKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGIISA--CVNLGLSDKAHSILDE 393
+KG K L+ E QK P +D V F I+ C N GL D+ +L++
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCP----LD-DVTFNILVDFFCQN-GLVDRVIELLEQ 381
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + GC + Y + +CKE EA L+ +SS G + + +Y +++ ++
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A L M I G N +N
Sbjct: 442 WVDAEELMSQM--------------IQQGCPPN----------------------PVTFN 465
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++I+ CK G +E A L++M+ P+ +Y ++I+G A + L + + +
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV-- 523
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KGI + + AL + G + V+Q+ + ++ + D Y
Sbjct: 524 -----NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 10/218 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN + L+G C + V DAE+++ M G PN +F L KGL E+ +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWV-DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
EL M G S ++ YS++I G K G E A + + + G + C +
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 337 VKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ +G N +I+ ++ + I D + +IS+ +D+A M
Sbjct: 542 SR--------EGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+ GC Y +K E EA +L+ ++ S G
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 121/565 (21%), Positives = 218/565 (38%), Gaps = 78/565 (13%)
Query: 91 FKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLG 150
F + A+ L P SLI N+++ + +V + ++N + + T T++
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCR---EKNVRQGYELLVEMKKRNIVISPY-TYGTVVK 425
Query: 151 SMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALD 210
M ++ A+ +VK M + P + L+ +NS F ++V +E +
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGC-RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI- 483
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVL------GVRPNESSFGFLAY 264
P+I+ N+ + G +S A+++ E S L G++PN ++G
Sbjct: 484 ------APDIFCYNSLIIG-------LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
Y + M E G V + LI+ Y K G + A + G +
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNLGL 383
+ +TY ++ G +N V + +++ GI D +G+ I+ LG
Sbjct: 591 DA----KTYTVLMNGLFKNDKVDDAEEIF---REMRGKGIAPD-VFSYGVLINGFSKLGN 642
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
KA SI DEM G + + +Y L +C+ +A +L+ ++S GL + Y
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA---------- 493
+I+ S D AF LF +M+ + Y T++ G + E
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 494 --------AFLDEVVEDPRVEVKTH-------------------DWNSIIHAFCKAGRLE 526
A ++ V + + E+KT +N +I CK G LE
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEH 586
AK +M P TY SL+NGY + + ++ E GI+ +H
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI-------AAGIEPDH 875
Query: 587 NLVDAFLYALVKGGFFDAVMQVVEK 611
+ + A +K G + +V++
Sbjct: 876 IMYSVIINAFLKEGMTTKALVLVDQ 900
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 114/527 (21%), Positives = 206/527 (39%), Gaps = 71/527 (13%)
Query: 73 TNLHKSLLTNNT-DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVY 131
T L K+ L N+ +A + K + + P NSLI LS + + A + +V
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK---RMDEARSFLVE 512
Query: 132 VIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKN 191
++E K F T + A+ A A VK M + L G + + C+K
Sbjct: 513 MVENGLKPNAF-TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 192 SNFVAFLKVFEECC--RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
KV E C R +D+ + Y L + V DAE++ M
Sbjct: 572 -------KVIEACSAYRSMVDQGI-LGDAKTYT---VLMNGLFKNDKVDDAEEIFREMRG 620
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G+ P+ S+G L ++ G +K + M E G + ++ Y+ L+ G+ + G +E
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 310 ASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRS 369
A L +++ + TYC ++ G+ ++G++ L E ++ G+V D
Sbjct: 681 AKEL----LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE---MKLKGLVPDSF 733
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV--- 426
V ++ C L ++A +I N GC+ + + K +T T+++
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRL 792
Query: 427 MDISSS--GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
MD S G DV Y+ +I+ + ++A LF M+ A + +Y +++ G
Sbjct: 793 MDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 485 ENHRPELMAAFLDEVVE---------------------------------------DPRV 505
+ R M DE + D
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++ +++ F K G +E A++ + M+ LQ+ P+ T + LIN
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 174/464 (37%), Gaps = 120/464 (25%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL--------------- 262
P Y + ++G C ++ + DA+ ++ M LGV + ++ L
Sbjct: 275 PLKYTYDVLIDGLC-KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 263 -------------AYLY-------ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
Y+Y + +G+ EK L M G Q Y+SLI GY
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
+ N+ +L+ + N+ S + TY VVKG +G++ G N++ +++ S
Sbjct: 394 REKNVRQGYE-LLVEMKKRNIVISPY---TYGTVVKGMCSSGDLDGAYNIV---KEMIAS 446
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G + + +I + A +L EM G + + Y + K R EA
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI------------- 469
++++ +GL+ + Y A I I + +F SA ++MRE +
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 470 YDLKG----------------------SYLTIMTGLMENHR-----------------PE 490
Y KG +Y +M GL +N + P+
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 491 LM------------------AAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+ ++ DE+VE+ P V + +N ++ FC++G +E AK
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII----YNMLLGGFCRSGEIEKAK 682
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
L M PN TY ++I+GY + ++ E+K K
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 155/382 (40%), Gaps = 73/382 (19%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE----------SSFGFLAYLY 266
KPN+ N ++G C + +A+++ E M G+ PNE +F L
Sbjct: 212 KPNVITYNIIVDGLC-KVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTL 270
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
+G + +L +M E G +V Y+SLI G+ +G+L SA R + + + E
Sbjct: 271 CKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSA-RELFVSMPSKGCEPD 329
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL---------EPSGIVVDRSVGFGIISA 377
S Y ++ G+ + V+ EA KL P+ I D S+ GI A
Sbjct: 330 VIS---YNVLINGYSKTLKVE-------EAMKLYNEMLLVGKRPNVITYD-SLLKGIFLA 378
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
G D A + M A G + Y L CK EA +L ++ SS +L+
Sbjct: 379 ----GKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLE 434
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
+ N + LI+ + ++A+ LF + E H P ++
Sbjct: 435 IENLNCLIDGLCKAGKLETAWELFEKLSN------------------EGHEPNVVT---- 472
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ +IH FC+ G+++ A +++M P+ TY +L+ G+ +
Sbjct: 473 --------------YTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYES 518
Query: 558 EQYFSVLMMWHEIKRK-ISTDG 578
+ V+ + H + +K +S D
Sbjct: 519 NKLEEVVQLLHRMAQKDVSPDA 540
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 149/361 (41%), Gaps = 31/361 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA--------YLYALK 269
PNI N ++G C +S+A ++ M LG P+ ++G L ALK
Sbjct: 137 PNIVTYNTLIKGLCME-HRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALK 195
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
QE + ++ E ++ Y+ ++ G K+G + A + G +
Sbjct: 196 LHQEMLNDISRY--EINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLD 253
Query: 330 KE------TYCEVVKGFLQNGNVKGLANLIIEAQKLE----PSGIVVDRSVGFGIISACV 379
+ T+ ++ + G V IEA+KL SGIV D +I
Sbjct: 254 QGLQPDMVTFNVLIDTLCKEGKV-------IEAKKLLGVMIESGIVPDLVTYNSLIEGFC 306
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
+G + A + M + GC + Y + Y K + EA +L ++ G + +V
Sbjct: 307 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 366
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP-ELMAAFLDE 498
YD+L++ + A LF M+ I + +Y + GL +N E M F +
Sbjct: 367 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 426
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+ ++E++ + N +I CKAG+LE A ++ EPN TY +I+G+
Sbjct: 427 KSSNFKLEIE--NLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREG 484
Query: 559 Q 559
Q
Sbjct: 485 Q 485
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 15/172 (8%)
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G S + Y +K C EHR +EAT+L + + G DV Y LI+ + + A
Sbjct: 134 GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIA 193
Query: 458 FSLFRDM-REARIYDLKG-----SYLTIMTGLMENHRPELMAAFLDEV---------VED 502
L ++M + Y++ +Y I+ GL + R + +E+ + D
Sbjct: 194 LKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLD 253
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++ +N +I CK G++ +AK+ L MI P+ TY SLI G+
Sbjct: 254 QGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGF 305
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 149/354 (42%), Gaps = 16/354 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQEK 274
+ P++Y N + C+ L+ + A V+ + LG +P+ ++F L ++G + E
Sbjct: 143 IPPDVYTLNILINSFCH-LRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEA 201
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET-- 332
+ + + E GF +V Y +L++G K+GN +A R + +M Q +
Sbjct: 202 LHLFDKTIGE-GFQPDVVTYGTLMNGLCKVGNTSAAIRLL------RSMVQKNCRPNVIA 254
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++ ++ V NL E + GI D +I A NL ++L+
Sbjct: 255 YNTIIDSLCKDRQVTEAFNLFSE---MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLN 311
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM + V+ + A CKE A A +V + G++ DV Y AL++
Sbjct: 312 EMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRS 371
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A +F M SY ++ G + R + L+++ + T +
Sbjct: 372 EMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIA-DTVTY 430
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
N++IH C GRL+ A M+ P+ TY L++ Y+ + + M+
Sbjct: 431 NTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLD-YLCKNHHLAEAMV 483
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 102/249 (40%), Gaps = 8/249 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+I+ N+ + C L ++ M + PN F + +G+
Sbjct: 283 ISPDIFTYNSLIHALC-NLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 341
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++ +M + G +V Y++L+ G+ ++ A + + G + + +Y
Sbjct: 342 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP----NVRSYNI 397
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ Q + L+ +++ G++ D +I ++G A ++ EM
Sbjct: 398 LINGYCQIQRMDKAMGLL---EQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 454
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A G L Y L CK H AEA L+ I S L D+ Y+ I+ + + +
Sbjct: 455 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 514
Query: 456 SAFSLFRDM 464
+A LF ++
Sbjct: 515 AARDLFSNL 523
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 130/284 (45%), Gaps = 22/284 (7%)
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS---RTILLCLGGGNMEQSDFSKETY 333
EL S M S +V +S+LI G+ +G LE A R ++L N+ + T+
Sbjct: 229 ELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVL----KNINPDYY---TF 281
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+V + GN+KG N+++ K G++ + ++ + +KA +L+
Sbjct: 282 NILVDALCKEGNLKGAKNMLVVMMK---EGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNT 338
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
++ G + Y + +CK EA L D+ G+ D Y++LI+ S
Sbjct: 339 ISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGR 398
Query: 454 FQSAFSLFRDMRE----ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
A+ L +M + A I+ +Y ++ L +NH + A + ++ +D ++
Sbjct: 399 ISYAWELVDEMHDNGQPANIF----TYNCLIDALCKNHHVDQAIALVKKI-KDQGIQPDM 453
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ +N +I+ CK GRL++A+ + ++ + N TY ++NG
Sbjct: 454 YTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNG 497
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 135/322 (41%), Gaps = 11/322 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ +A + G C + + +A + M + + P+ +F L +G +
Sbjct: 239 ISPDVVTFSALIYGFCI-VGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGA 297
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ +M + G +V YSSL+ GY + + A + G + +YC
Sbjct: 298 KNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNA----HSYCT 353
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ GF + +K + + ++ GI D+ +I G A ++DEM+
Sbjct: 354 MINGFCK---IKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMH 410
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y + A CK H +A LV I G+Q D+ ++ LI +
Sbjct: 411 DNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLK 470
Query: 456 SAFSLFRDMREARIYDLKG-SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
+A +F+D+ ++ Y + +Y ++ GL + + A L + ++D + + +
Sbjct: 471 NAQDVFQDLL-SKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSK-MDDNGIIPDAVTYET 528
Query: 515 IIHAFCKAGRLEDAKRTLRRMI 536
+I A E A++ LR MI
Sbjct: 529 LIQALFHKDENEKAEKLLREMI 550
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 166/422 (39%), Gaps = 71/422 (16%)
Query: 243 VIETMSVLG--VRPNESSFGF---LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+IE +LG V+ N + + L+ G+ I L+N + ++M F S+
Sbjct: 66 IIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSM 125
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
++ +K+G TI T+ ++KG NG VK +
Sbjct: 126 MAKILKMG---YEPDTI-----------------TFNTLIKGLCLNGKVKEALHFHDHVL 165
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
L G +D+ +I+ +G + A +L +++ + + +Y + + CK
Sbjct: 166 AL---GFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHK 222
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY------- 470
+A +L + + + DV + ALI + AF LFR+M I
Sbjct: 223 LVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFN 282
Query: 471 ----------DLKGSYLTIMTGLMENHRPELM--AAFLDEVVEDPRVEVKTHDWNSI--- 515
+LKG+ ++ + E P ++ ++ +D +V H N+I
Sbjct: 283 ILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQM 342
Query: 516 ------------IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
I+ FCK +++A M F P+ TY SLI+G + + +
Sbjct: 343 GAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGR---I 399
Query: 564 LMMWHEIKRKISTDGQKGIKFEHN-LVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKW 622
W E+ ++ +GQ F +N L+D AL K D + +V+K ++ + D +
Sbjct: 400 SYAW-ELVDEMHDNGQPANIFTYNCLID----ALCKNHHVDQAIALVKKIKDQGIQPDMY 454
Query: 623 KY 624
+
Sbjct: 455 TF 456
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 93/474 (19%), Positives = 181/474 (38%), Gaps = 50/474 (10%)
Query: 207 IALDENLDF--MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
I+L L+F + P+I+ N + C+ + ++ A ++ + +G P+ +F L
Sbjct: 88 ISLSRRLEFHGITPDIFTFNILINCYCH-MAEMNFAFSMMAKILKMGYEPDTITFNTLIK 146
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
L G ++ + + GF Y +LI+G K+G +RT L L + +
Sbjct: 147 GLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGE----TRTALQMLRKIDGK 202
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSV-GFGIIS----- 376
+ Y ++ ++ V L + A+K+ P + + GF I+
Sbjct: 203 LVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEA 262
Query: 377 ------------------------ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
A G A ++L M G + Y +
Sbjct: 263 FGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDG 322
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
YC ++ +A ++ IS G + +Y +I + A SLF DM+ I
Sbjct: 323 YCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPD 382
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
K +Y +++ GL ++ R +DE + D +N +I A CK ++ A +
Sbjct: 383 KVTYNSLIDGLCKSGRISYAWELVDE-MHDNGQPANIFTYNCLIDALCKNHHVDQAIALV 441
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAF 592
+++ +P+ T+ LI G + L ++ + + + G + +N++
Sbjct: 442 KKIKDQGIQPDMYTFNILIYGLCKVGR----LKNAQDVFQDLLSKGYSVNAWTYNIM--- 494
Query: 593 LYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYK---QAFMENHKKLKVAKLRKR 643
+ L K G FD ++ K + + D Y+ QA + K KL +
Sbjct: 495 VNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLRE 548
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 165/373 (44%), Gaps = 22/373 (5%)
Query: 193 NFVAFLKVFEECCRIALDEN-LDFMK--------PNIYACNAALEGCCYGLQSVSDAEKV 243
N ++F + + C++ L +N ++ + P+ Y ++G C + + +A +
Sbjct: 180 NVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLC-KVDRIDEAVSL 238
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
++ M + G P+ ++F L KG ++ +L M G V Y++LI G
Sbjct: 239 LDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 298
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
G L+ A L L + ++ TY ++ G ++ G A +++ +E G
Sbjct: 299 KGKLDKA----LSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLV---LMEERG 351
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+V+ V ++S G S++A + E GC + +Y + C++ + EA
Sbjct: 352 YIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAM 411
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+++ +++ G + + +L++ + A +++DM + + + Y ++ GL
Sbjct: 412 KILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGL 471
Query: 484 MENHRP-ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ--F 540
++ + E M + + R +V ++S+I C AG +E+A + M+ L+
Sbjct: 472 CKDGKVMEAMMVWAKMLATGCRPDVVA--YSSMIQGLCDAGSVEEALKLYNEMLCLEPDS 529
Query: 541 EPNDQTYLSLING 553
+P+ TY L N
Sbjct: 530 QPDVITYNILFNA 542
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 89/232 (38%), Gaps = 54/232 (23%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
II + LGL D A + EM C Y + CK R EA L+ ++ G
Sbjct: 187 IIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEG 246
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ LI DF T +T L++N
Sbjct: 247 CFPSPATFNVLINGLCKKGDF-----------------------TRVTKLVDN------- 276
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
FL V + EV +N++IH C G+L+ A L RM+ + PN+ TY ++ING
Sbjct: 277 MFLKGCVPN---EVT---YNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIING 330
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN---LVDAFLYALVKGGFF 602
V K+ + DG + + +V+ ++Y+++ G F
Sbjct: 331 LV---------------KQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLF 367
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 83/224 (37%), Gaps = 38/224 (16%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A S+LDEM GC + + CK+ T+LV ++ G + Y+ L
Sbjct: 233 DEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTL 292
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP--------------- 489
I A SL M ++ + +Y TI+ GL++ R
Sbjct: 293 IHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGY 352
Query: 490 ---------------------ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
E M F + + D ++ T +++++ C+ + ++A
Sbjct: 353 IVNEYVYSVLVSGLFKEGKSEEAMRLFKESM--DKGCKLNTVLYSALVDGLCRDRKPDEA 410
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+ L M PN T+ SL+ G+ + +W ++ +
Sbjct: 411 MKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTK 454
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 140/364 (38%), Gaps = 62/364 (17%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN++ +E CC + A+ + M LG+ N+ + + + KG ++
Sbjct: 138 VSPNVFIYTILIEACCRN-GDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDG 196
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE---- 331
EL M G + Y+SLI+ Y + G L A + + SK
Sbjct: 197 FELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVF-----------DEISKRGVAC 245
Query: 332 ---TYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDK 386
TY ++ G + G V L+ ++ + P+ R+ + C N G DK
Sbjct: 246 NAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPT----TRTFNMLMDGLC-NTGQLDK 300
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A S L+++ G L Y + + K ++ ++LV ++ G+ Y L+
Sbjct: 301 ALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMN 360
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ S D + A+ +F M+ RI GL+ +
Sbjct: 361 TFVRSDDIEKAYEMFHLMK--RI------------GLVPDQ------------------- 387
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
H + +IH C G + +A + + M+ + +PND Y ++INGY + L
Sbjct: 388 ---HTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKF 444
Query: 567 WHEI 570
E+
Sbjct: 445 LEEM 448
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 117/295 (39%), Gaps = 59/295 (20%)
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAA-----LEGCCYGL 234
+ + + CR +AF KVF+E + + ACNA + G C
Sbjct: 215 YNSLITEYCRDGKLSLAF-KVFDEISKRGV------------ACNAVTYNILIGGLCRKG 261
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
Q VS AE ++E M + P +F L G +K + + G +V Y
Sbjct: 262 Q-VSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTY 320
Query: 295 SSLISGYVKLGNLE--------------SASRTILLCLGGGNMEQSDFSK---------- 330
+ LISG+ K+GN S S+ L + D K
Sbjct: 321 NILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKR 380
Query: 331 -------ETYCEVVKGFLQNGNVKGLANL---IIEAQKLEPSGIVVDRSVGFGIISACVN 380
TY ++ G GN+ + L ++E L+P+ ++ + + G C
Sbjct: 381 IGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMH-LQPNDVIYNTMIN-GYCKECN- 437
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
S KA L+EM G + + Y+ T++ CK+ ++ EA +L+ +++ +GL+
Sbjct: 438 ---SYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLK 489
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 108/286 (37%), Gaps = 41/286 (14%)
Query: 323 MEQSDFSKETYCEVVKGFLQNGNV-KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
+ ++ F ++ +K F +NGNV KG L ++E G+ + + +I AC
Sbjct: 100 LGRTQFDVYSFWITIKAFCENGNVSKGFELL----AQMETMGVSPNVFIYTILIEACCRN 155
Query: 382 GLSDKAHSILDEMNACGCSVGLGVY----------------------------VPTL--- 410
G D+A + M+ G + +Y +P L
Sbjct: 156 GDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTY 215
Query: 411 ----KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
YC++ + + A ++ +IS G+ + Y+ LI A L M+
Sbjct: 216 NSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKR 275
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
A I ++ +M GL + + ++L+++ +N +I F K G
Sbjct: 276 AHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLV-TYNILISGFSKVGNSS 334
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+R M P+ TY L+N +V ++ M+H +KR
Sbjct: 335 VVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKR 380
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 130/325 (40%), Gaps = 12/325 (3%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G+ P+ ++ Y G+ + LM G Y++L+ G + G + A
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDR 368
+ G + Y +V G + G + L+ E + EP+ +V +
Sbjct: 162 MAVFV----GMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYN- 216
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+I N G + A + + M+ CS + Y + CK + A L
Sbjct: 217 ----ALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ +GL+ +V Y ALI+ Q AF L M + ++ ++ L + +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
E FL +V+ V+V + S+I CK G+++ A +++MI F P+ +Y
Sbjct: 333 VEEAQLFLGSLVKK-GVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYS 391
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRK 573
SLI+G ++ +M ++ K
Sbjct: 392 SLIDGLCRQKKLSQATLMLEDMMEK 416
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 129/338 (38%), Gaps = 44/338 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PNI NA ++G C + A KV E M PN ++ L + G E+ +
Sbjct: 209 EPNIVVYNALIDGYCNA-GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L S M E G +V Y++LI G G+L+ A R + L
Sbjct: 268 VLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHL-------------------- 307
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+E +G+V + +I A ++A L +
Sbjct: 308 ----------------------METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVK 345
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G V VY + CK + A +L+ + S G D +Y +LI+ +
Sbjct: 346 KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A + DM E I +Y I+ L+ E D+++ + + +
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIAT-GINPDIVTYTVFV 464
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++C+ GR+EDA+ + +M+ PN TY +LI GY
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 142/350 (40%), Gaps = 19/350 (5%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y++LI+ Y G++ +A + + L G S Y V G+ + G + +
Sbjct: 75 YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDS----YAYTSFVLGYCRAGMLTHACRVF 130
Query: 354 IEAQKLEP-SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ L P G + ++ + G+ +A ++ M A C+ VY +
Sbjct: 131 V----LMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHG 186
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
C+ RT EA L+ + S+G + ++ Y+ALI+ + + + A +F M R
Sbjct: 187 LCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPN 246
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+Y ++ GL ++ + E +VE +E + ++I C G L+ A R L
Sbjct: 247 VRTYTELIHGLCKSGKVERAMVLFSRMVE-AGLEPNVVTYTALIQGQCNEGHLQCAFRLL 305
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAF 592
M PND T+ LI+ E+ E + + + +KG+K + +
Sbjct: 306 HLMETNGLVPNDWTFSVLIDALCKREKV-------EEAQLFLGSLVKKGVKVNEVVYTSL 358
Query: 593 LYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAF--MENHKKLKVAKL 640
+ L K G DA ++++K D Y + KKL A L
Sbjct: 359 IDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL 408
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 147/350 (42%), Gaps = 23/350 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA-YLYALKGLQEK 274
++PN+ A ++G C + A +++ M G+ PN+ +F L L + ++E
Sbjct: 278 LEPNVVTYTALIQGQC-NEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+ L SL+ + G V Y+SLI G K G +++A + + G + + +Y
Sbjct: 337 QLFLGSLVKK-GVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA----HSYS 391
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G + K L+ + + + GI II V S+ I D+M
Sbjct: 392 SLIDGLCRQ---KKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
A G + + Y +++YC+E R +A +++ + G+ ++ Y+ LI
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE------------LMAAFLDEVVED 502
AFS F M + SY ++ +++ + + L+++ E
Sbjct: 509 SQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITER 568
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++ + ++ I C+ RLE+AK M P++ Y S+I+
Sbjct: 569 -QLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 163/412 (39%), Gaps = 35/412 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA-YLYALKGLQEKIV 276
P+ ++ C G V DA +++E M G+ N ++ L L + L E +
Sbjct: 182 PDNTTLTVVVQSLCLG-DRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 240
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
L + GF+ +V YS++I G K G L A E+ + TY
Sbjct: 241 LLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF---------EEMSCAPTAITYN 291
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G+ + G++ L+ K+ D ++SA +G D A+ + +M
Sbjct: 292 SLIGGYCRAGDMDEAIRLL---GKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQM 348
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
A S + + + C E R +A +L+ +I+ G + Y+ +++ S
Sbjct: 349 VANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQV 408
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKTHDWN 513
+ A L D R +Y ++ G R + +LD++ E +
Sbjct: 409 RKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYA 468
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
I+ A C+ GR +DA + MI + P T+ +++ A Q HE+ +
Sbjct: 469 IILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQP----QQAHELLEE 524
Query: 574 ISTDGQKGIKFEH----NLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
+ IK+ H DA + A + G + + E + E++++ DK
Sbjct: 525 M-------IKYGHTPGPGTCDAVVSAYCRAGM---IQKADELASELRLYTDK 566
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 116/522 (22%), Positives = 203/522 (38%), Gaps = 42/522 (8%)
Query: 50 PPNSPTQQQQQQTLTQDNITSLETNLHKSL---LTNNTDEAWKSFKSLTANSLFPSKPVT 106
PP S T+++ S LH SL L + T +L +SL P
Sbjct: 29 PPTSHCHDPILTTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDLINLNPHSLSPP---- 84
Query: 107 NSLIAHLSSLQDNHNLK---RAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFA 163
SL++ L H+ + ++ ++ + + + L + Q++ + S + N+A+ F
Sbjct: 85 -SLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFT 143
Query: 164 LVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYAC 223
V + R L L++ + F + +C R+ NL ++C
Sbjct: 144 SV---LEARGTHQSNLVFSVLMNAYTDSGYFSDAI----QCFRLVRKHNLQI---PFHSC 193
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN 283
+ L S A E + G P+ F L + + KI E + L
Sbjct: 194 GYLFDRL-MKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCK---EHKINEAQLLFG 249
Query: 284 EFG---FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-TYCEVVKG 339
E G +V +++LI+GY K GNL+ R L ME F TY ++ G
Sbjct: 250 EIGKRGLRPTVVSFNTLINGYCKSGNLDQGFR-----LKRFMMENRVFPDVFTYSVLING 304
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
+ G + L +E + G+V + +I+ G +D I +M G
Sbjct: 305 LCKEGQLDDANKLFLE---MCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGV 361
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
+ Y + CK EA +LV++++ GL+ D Y LI+ D +SA
Sbjct: 362 KPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALE 421
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD--WNSIIH 517
+ ++M + I ++ +++G + L E++E +K D + +IH
Sbjct: 422 IRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLE---AGIKPDDATYTMVIH 478
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
FCK G ++ + L+ M P TY L+NG Q
Sbjct: 479 GFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQ 520
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 140/333 (42%), Gaps = 15/333 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N + C +++A+ + + G+RP SF L Y G ++
Sbjct: 223 PDVCKFNVLMHRLCKE-HKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFR 281
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSKETYCEV 336
L+ M E + YS LI+G K G L+ A++ L +C G + +D + T
Sbjct: 282 LKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG--LVPNDVTFTT---- 335
Query: 337 VKGFLQNGN-VKGLANLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
L NG+ V G A+L +E Q++ G+ D +I+ +G +A ++ EM
Sbjct: 336 ----LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM 391
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G Y + CKE A ++ ++ G++LD + ALI
Sbjct: 392 TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQV 451
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A R+M EA I +Y ++ G + + L E+ D V +N
Sbjct: 452 IEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVP-GVVTYNV 510
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+++ CK G++++A L M+ L P+D TY
Sbjct: 511 LLNGLCKQGQMKNANMLLDAMLNLGVVPDDITY 543
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 43/246 (17%)
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
+ L L+ A + +E+ CG + + + CKEH+ EA L +I GL+ V
Sbjct: 201 MKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTV 260
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
+++ LI S + F L R M E R++ P++
Sbjct: 261 VSFNTLINGYCKSGNLDQGFRLKRFMMENRVF------------------PDVFT----- 297
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
++ +I+ CK G+L+DA + M PND T+ +LING+
Sbjct: 298 -------------YSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTG 344
Query: 559 QYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVF 618
+ + ++ ++ R KG+K + + + L K G ++V + + +
Sbjct: 345 RADLGMEIYQQMLR-------KGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLK 397
Query: 619 VDKWKY 624
DK+ Y
Sbjct: 398 PDKFTY 403
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/482 (20%), Positives = 198/482 (41%), Gaps = 42/482 (8%)
Query: 71 LETNLHKSLL--TNNTDEAWKSFKSLTANSLFPSKPVT---NSLIAHL-------SSLQD 118
+E +L K+LL TNN AW+ FK + ++ S ++ IA + +Q+
Sbjct: 1 MEQSLVKALLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQE 60
Query: 119 NHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFE 178
HNL +S + + KL +V ++ + + A P F LV+ F P
Sbjct: 61 LHNL--ILSSSI----QKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPEN--KPSV 112
Query: 179 LWGGFLVDICRKNSN--FVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQS 236
L++ C K FV++L C IA P Y N + C
Sbjct: 113 YLYNLLLESCIKERRVEFVSWLYKDMVLCGIA---------PQTYTFNLLIRALCDS-SC 162
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V A ++ + M G +PNE +FG L Y GL +K +EL + M FG V Y++
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNT 222
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
++S + + G + + + + M + + T+ + + G V + +
Sbjct: 223 IVSSFCREGRNDDSEKMV------EKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
Query: 355 EAQKLEPSGIVVDRSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ + E G+ S+ + + + +GL + A ++ + + L Y L+
Sbjct: 277 DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGL 336
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
+ + EA ++ ++ G+ + +Y+ L++ A ++ M+ +
Sbjct: 337 VRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDA 396
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y ++ G + + + L E++ + + + N ++H+ K GR+ +A+ LR
Sbjct: 397 VTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP-NAYTCNILLHSLWKMGRISEAEELLR 455
Query: 534 RM 535
+M
Sbjct: 456 KM 457
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 174/471 (36%), Gaps = 92/471 (19%)
Query: 182 GFLVDICRKNSNFVAFLK---------VFEECCRIALDENLDFMKPNIYACNAALEGCC- 231
G + DI NS A K +F + + LDE L +PN N L+G C
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSD---MELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 232 YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKIVELESL---MNEFG 286
GL + DA+ + E+ +R N+ +Y L+GL K +E E++ M + G
Sbjct: 304 VGL--LEDAKTLFES-----IRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNG 344
+ Y+ L+ G KLG L A +TI+ G M+++ + TY ++ G+ G
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDA-KTIV-----GLMKRNGVCPDAVTYGCLLHGYCSVG 410
Query: 345 NVKGLANLIIEA--------------------------------QKLEPSGIVVDRSVGF 372
V +L+ E +K+ G +D
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCN 470
Query: 373 GIISACVNLGLSDKAHSILDEMNACG-----------------------CSVGLGVYVPT 409
I+ G DKA I+ M G C L Y
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
L CK R AEA L ++ LQ D Y+ I SAF + +DM +
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+ +Y +++ GL ++ + +DE+ E + +N+ I C+ ++EDA
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG-ISPNICTYNTAIQYLCEGEKVEDAT 649
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQK 580
L M+ PN ++ LI + + M + +S GQK
Sbjct: 650 NLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFD---MAQEVFETAVSICGQK 697
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 158/422 (37%), Gaps = 89/422 (21%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG------- 270
P+IY+ N ++G C L +SDA+ ++ M GV P+ ++G L + Y G
Sbjct: 359 PSIYSYNILMDGLCK-LGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS 417
Query: 271 -LQE------------------------KIVELESL---MNEFGFSSQMVFYSSLISGYV 302
LQE +I E E L MNE G+ V + ++ G
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477
Query: 303 KLGNLESASRTI----------LLCLGGGNMEQSDFSKE---------TYCEVVKGFLQN 343
G L+ A + L LG + D S TY ++ G +
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 344 GNVKGLANLIIE--AQKLEPSGIVVDR-----------SVGFGII--------------- 375
G NL E +KL+P + + S F ++
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 376 -SACVNLGLSDKA---HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
S + LG+ ++ H ++DEM G S + Y ++ C+ + +AT L+ ++
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQ 657
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
+ +V ++ LIEA DF A +F I K ++M + L
Sbjct: 658 KNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE--TAVSICGQKEGLYSLMFNELLAAGQLL 715
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
A L E V D E+ T + ++ + CK LE A L +MI + + + +I
Sbjct: 716 KATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVI 775
Query: 552 NG 553
+G
Sbjct: 776 DG 777
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 149/365 (40%), Gaps = 54/365 (14%)
Query: 231 CYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
CY QS + A ++ T+ G +PN +F + + + G+ K ++ + G+
Sbjct: 99 CYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLF 158
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVK 347
Y +LI+G K G +++A + ME+S Y ++ G ++G V
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLL------QEMEKSSVQPNLVMYSALIDGLCKDGFVS 212
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG------------------------- 382
L ++ GI++D +I C ++G
Sbjct: 213 DALGL---CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269
Query: 383 -LSD---------KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
L D +A +L M+ G + Y ++ YC EA +L +
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GL+ DV NY+ LI+ ++ A LF+++ + SY +++ GL + R +
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389
Query: 493 AAFLDEV---VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
LDE+ + P V +N +I A CK GR+ +A L M+ +PN TY +
Sbjct: 390 KKLLDEMHGSAQPPDVVT----YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 550 LINGY 554
+++GY
Sbjct: 446 MMDGY 450
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 171/435 (39%), Gaps = 63/435 (14%)
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIA------------LDENLDFMKPNIYACNAALEG 229
G L+D NS + + CC + + EN+D P+ Y N ++
Sbjct: 225 GILLDAVTYNS-------LIDGCCSVGRWQEVTQLLTKMVRENVD---PDDYTFNILIDA 274
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
C + +A+ V+ MS G +P+ ++ L Y + + EL + M + G
Sbjct: 275 LCKE-GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP 333
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
++ Y+ LI GY K ++ A + L N+ + S Y ++ G +G + +
Sbjct: 334 DVLNYNVLIDGYCKTKMVDEA-MVLFKELCNKNLVPTIAS---YNSLIDGLCNSGRISHV 389
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
L+ E VV ++ +I A G +A +L M G + Y
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNI---LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ YC + A + + SGL+ D+ NY+ LI ++ A LF++MR +
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR-VEVKTHD----------------- 511
SY +++ GL R + LDE+ + + +V T++
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566
Query: 512 ---------W------NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
W ++I+ CK +L+ A+ L+ ++ PN QTY LIN
Sbjct: 567 LFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCK 626
Query: 557 AEQYFSVLMMWHEIK 571
+ +++ +++
Sbjct: 627 DGSFGEAMLLLSKME 641
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 122/571 (21%), Positives = 221/571 (38%), Gaps = 78/571 (13%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
++A F + A+ L P SLI N+++ + +V + ++N + + T
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCR---EKNVRQGYELLVEMKKRNIVISPY-T 419
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
T++ M ++ A+ +VK M + P + L+ +NS F ++V +E
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGC-RPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVL------GVRPNESS 258
+ P+I+ N+ + G +S A+++ E S L G++PN +
Sbjct: 479 KEQGI-------APDIFCYNSLIIG-------LSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+G Y + M E G V + LI+ Y K G + A +
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISA 377
G + + +TY ++ G +N V + +++ GI D +G+ I+
Sbjct: 585 DQGILGDA----KTYTVLMNGLFKNDKVDDAEEIF---REMRGKGIAPD-VFSYGVLING 636
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
LG KA SI DEM G + + +Y L +C+ +A +L+ ++S GL +
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA---- 493
Y +I+ S D AF LF +M+ + Y T++ G + E
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG 756
Query: 494 --------------AFLDEVVEDPRVEVKTH-------------------DWNSIIHAFC 520
A ++ V + + E+KT +N +I C
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQK 580
K G LE AK +M P TY SL+NGY + + ++ E
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI-------AA 869
Query: 581 GIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
GI+ +H + + A +K G + +V++
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 114/527 (21%), Positives = 206/527 (39%), Gaps = 71/527 (13%)
Query: 73 TNLHKSLLTNNT-DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVY 131
T L K+ L N+ +A + K + + P NSLI LS + + A + +V
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK---RMDEARSFLVE 512
Query: 132 VIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKN 191
++E K F T + A+ A A VK M + L G + + C+K
Sbjct: 513 MVENGLKPNAF-TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 192 SNFVAFLKVFEECC--RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
KV E C R +D+ + Y L + V DAE++ M
Sbjct: 572 -------KVIEACSAYRSMVDQGI-LGDAKTYT---VLMNGLFKNDKVDDAEEIFREMRG 620
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G+ P+ S+G L ++ G +K + M E G + ++ Y+ L+ G+ + G +E
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 310 ASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRS 369
A L +++ + TYC ++ G+ ++G++ L E ++ G+V D
Sbjct: 681 AKEL----LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE---MKLKGLVPDSF 733
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV--- 426
V ++ C L ++A +I N GC+ + + K +T T+++
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRL 792
Query: 427 MDISSS--GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
MD S G DV Y+ +I+ + ++A LF M+ A + +Y +++ G
Sbjct: 793 MDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 485 ENHRPELMAAFLDEVVE---------------------------------------DPRV 505
+ R M DE + D
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++ +++ F K G +E A++ + M+ LQ+ P+ T + LIN
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 174/464 (37%), Gaps = 120/464 (25%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL--------------- 262
P Y + ++G C ++ + DA+ ++ M LGV + ++ L
Sbjct: 275 PLKYTYDVLIDGLC-KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 263 -------------AYLY-------ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
Y+Y + +G+ EK L M G Q Y+SLI GY
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
+ N+ +L+ + N+ S + TY VVKG +G++ G N++ +++ S
Sbjct: 394 REKNVRQGYE-LLVEMKKRNIVISPY---TYGTVVKGMCSSGDLDGAYNIV---KEMIAS 446
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G + + +I + A +L EM G + + Y + K R EA
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI------------- 469
++++ +GL+ + Y A I I + +F SA ++MRE +
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 470 YDLKG----------------------SYLTIMTGLMENHR-----------------PE 490
Y KG +Y +M GL +N + P+
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 491 LM------------------AAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+ ++ DE+VE+ P V + +N ++ FC++G +E AK
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII----YNMLLGGFCRSGEIEKAK 682
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
L M PN TY ++I+GY + ++ E+K K
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 150/363 (41%), Gaps = 67/363 (18%)
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
VF+E R + +P + N + G C +++A + M+ G+ P+ ++
Sbjct: 136 VFDEMLRRGV-------QPTVVTFNTLMSGMCKA-SDLNNANALRGLMAKAGIAPDVYTY 187
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL--------ESAS 311
G G + +E+ M E G + V ++LI + K G++ E A+
Sbjct: 188 GAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMAT 247
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
R + ++D Y +V GF + ++K AN I+E ++ G+ D+
Sbjct: 248 RGV----------KADLV--AYNALVNGFCRVRDMKA-ANDIVE--EMRKDGLKPDKVTY 292
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
+I C G D A + EM+ G ++ Y + K R+ +A +++ ++
Sbjct: 293 TTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMME 352
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
+GLQ D Y +I+A + D ++ F ++M+ KG I+T
Sbjct: 353 AGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQN------KGKNPGIVT---------- 396
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+N +++ FC G++++A L M+ + PND TY L+
Sbjct: 397 --------------------YNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILL 436
Query: 552 NGY 554
+G+
Sbjct: 437 DGH 439
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 133/327 (40%), Gaps = 22/327 (6%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNL 307
GV P F L G K+ ++ +E G +V +++L+SG K +L
Sbjct: 109 GVPPEARQFNMLMRDMIRSG---KLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDL 165
Query: 308 ESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSG 363
+A+ G M ++ + + TY ++G + G ++ + E + L P+
Sbjct: 166 NNANAL------RGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNT 219
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+V+ + V GL + EM G L Y + +C+ A
Sbjct: 220 VVLTTLIDAHCKEGDVTAGLELRW-----EMATRGVKADLVAYNALVNGFCRVRDMKAAN 274
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+V ++ GL+ D Y LI+ + +A + ++M + + +Y +++GL
Sbjct: 275 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 334
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+ R L E++E ++ + +I AFCK G ++ + L+ M P
Sbjct: 335 SKAGRSVDAERILCEMME-AGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPG 393
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEI 570
TY ++NG+ + Q + M+ + +
Sbjct: 394 IVTYNVVMNGFCSLGQMKNADMLLNAM 420
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 14/217 (6%)
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A ++ DEM G + + + CK A L ++ +G+ DV Y A I+
Sbjct: 133 ARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQ 192
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL-MAAFLDEVVEDPRV 505
+ Q A +F +M E + ++T L++ H E + A L+ E
Sbjct: 193 GLCKTGRIQDAMEMFEEMCERGL----NPNTVVLTTLIDAHCKEGDVTAGLELRWEMATR 248
Query: 506 EVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
VK +N++++ FC+ ++ A + M +P+ TY +LI+G + +
Sbjct: 249 GVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTA 308
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
+ M E+ +G+ + A + L K G
Sbjct: 309 MEMKQEMS-------DEGVALDDVTYTALISGLSKAG 338
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 145/356 (40%), Gaps = 59/356 (16%)
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
++ + E ++ G S+ ++ Y+++++GY + GN+++A R I + F+ +T
Sbjct: 111 RVADAERVVEALGPSATIITYNTMVNGYCRAGNIDAARRMI---------DSVPFAPDT- 160
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
F N ++ L G V+D A ++ D+
Sbjct: 161 ------FTYNPLIRALCV----------RGCVLD-------------------ALAVFDD 185
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M GCS + Y L A CKE +A L+ ++ S G + D+ Y+ LI A + D
Sbjct: 186 MLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGD 245
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE-----LMAAFLDEVVEDPRVEVK 508
A + + +Y ++ L + R E L F ++ D EV
Sbjct: 246 VGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPD---EVT 302
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+N++I + C+ G + A + L +M P+ TY S+++G + + +
Sbjct: 303 ---FNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLK 359
Query: 569 EIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
E+ ++ + K + + + +L + G FD ++VV++ E D Y
Sbjct: 360 ELLAEMVS---KNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTY 412
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 140/326 (42%), Gaps = 24/326 (7%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEK 274
+P+I N + C V +A KV+ ++ G +P+ + Y LK L E+
Sbjct: 227 EPDIVTYNVLINAMC-SQGDVGEALKVLNSLPSYGCKPDA-----VTYTPVLKSLCSSER 280
Query: 275 IVELESLMNEFGFSSQM----VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
E + L+ + FS+ V ++++I+ + G + A++ + M + +
Sbjct: 281 WEEADKLLTKM-FSNDCAPDEVTFNAVITSLCQKGFVGRATKVL------AQMSEHGCTP 333
Query: 331 E--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKA 387
+ TY ++ G + V L+ E S + V F II++ GL D+A
Sbjct: 334 DIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRA 393
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAY-CKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
++DEM+ GC + Y + + CK +T EA L+ + S+GL D Y +L
Sbjct: 394 IKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAF 453
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ + A +FR ++ + K Y I+ GL + R +L F +V + +
Sbjct: 454 GLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMP 513
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTL 532
++ + ++ G LE+AK L
Sbjct: 514 DEST-YIILVEGIAYEGFLEEAKELL 538
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 140/342 (40%), Gaps = 17/342 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ + L G C+ + DA + + + +G RPN ++ L + V
Sbjct: 149 EPDLVTFTSLLHGFCH-WNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAV 207
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
E+ + M + G +V Y+SL+SG ++G A+ + + G T+ +
Sbjct: 208 EIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVI----TFTAL 263
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVV----DRSVGFGIISACVNLGLSDKAHSILD 392
+ F++ G I+EA++L I + D +I+ G D+A +
Sbjct: 264 IDAFVKVGK-------IMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFY 316
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M + G Y + +CK R + T++ ++S GL + Y LI+
Sbjct: 317 LMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVG 376
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
A +F M R +Y ++ GL N E A + + + +++ +
Sbjct: 377 RPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVE-KALMIFKYMRKREMDINIVTY 435
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
II CK G++EDA + +PN TY ++I+G+
Sbjct: 436 TIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 477
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/331 (18%), Positives = 126/331 (38%), Gaps = 48/331 (14%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN+ N+ + G C + SDA ++ M G++PN +F L + G +
Sbjct: 218 IRPNVVTYNSLVSGLC-EIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEA 276
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETY 333
EL +M + + Y++LI+G G L+ A + L ME + + ++ TY
Sbjct: 277 KELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYL------MESNGYYPNEVTY 330
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ GF ++ V+ + E + G+V + +I +G D A + ++
Sbjct: 331 TTLIHGFCKSKRVEDGTKIFYE---MSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQ 387
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + + Y L C +A + + + +++ Y +I+
Sbjct: 388 MGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGK 447
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ AF LF + + +P ++ +
Sbjct: 448 VEDAFDLFCSL------------------FSKGMKPNVIT------------------YT 471
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
++I FC+ G + +A ++M F PN+
Sbjct: 472 TMISGFCRRGFIHEADALFKKMKEDGFLPNE 502
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 116/292 (39%), Gaps = 8/292 (2%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M + GF +V ++SL+ G+ +E A +G G TY ++
Sbjct: 143 MMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNV----VTYTTLIHCLC 198
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
+N ++ + ++ +GI + ++S +G A +L +M G
Sbjct: 199 KNRHLNHAVEIF---NQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQP 255
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ + + A+ K + EA +L + + DV Y ALI T A +F
Sbjct: 256 NVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMF 315
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
M Y + +Y T++ G ++ R E E+ + V T + +I +C
Sbjct: 316 YLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLV-ANTITYTVLIQGYCL 374
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
GR + A+ +M + P+ +TY L++G LM++ ++++
Sbjct: 375 VGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKR 426
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
EA L + S + ++ L+ + F SLF M+ I + + +M
Sbjct: 65 EALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVM 124
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
+ + +P + FL ++++ E + S++H FC R+EDA +++ + F
Sbjct: 125 NCVCRSSQPCRASCFLGKMMK-LGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183
Query: 541 EPNDQTYLSLIN 552
PN TY +LI+
Sbjct: 184 RPNVVTYTTLIH 195
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 169/411 (41%), Gaps = 61/411 (14%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
+I + NA L+G C + D E++++ M + PN +F L GL E++ E+
Sbjct: 215 DIVSYNAVLKGLCMA-KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC--EV 336
+ M+E G + + Y+++I G K G+LE A+ + M C V
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL------NRMPSYGLKPNVVCYNTV 327
Query: 337 VKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGIISA--CVNLGLSDKAHSILDE 393
+KG K L+ E QK P +D V F I+ C N GL D+ +L++
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCP----LD-DVTFNILVDFFCQN-GLVDRVIELLEQ 381
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + GC + Y + +CKE EA L+ +SS G + + +Y +++ ++
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A L M+ +++ P F N
Sbjct: 442 WVDAEEL-------------------MSQMIQQGCPPNPVTF-----------------N 465
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++I+ CK G +E A L++M+ P+ +Y ++I+G A + L + + +
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV-- 523
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KGI + + AL + G + V+Q+ + ++ + D Y
Sbjct: 524 -----NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 10/218 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN + L+G C + V DAE+++ M G PN +F L KGL E+ +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWV-DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
EL M G S ++ YS++I G K G E A + + + G + C +
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 337 VKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ +G N +I+ ++ + I D + +IS+ +D+A M
Sbjct: 542 SR--------EGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+ GC Y +K E EA +L+ ++ S G
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 148/331 (44%), Gaps = 14/331 (4%)
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV 346
+ + + +S+LIS Y + G L + + +L + G + + S Y V+ G V
Sbjct: 240 YGNTVFAHSALISAYARSG-LATEAMGVLESMKGAGLRPTTVS---YNAVIDA-CGKGGV 294
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
L Q L+ G+ DR +++AC G + A ++ DEM G + Y
Sbjct: 295 DLRFTLGYFRQMLQ-DGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTY 353
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ A CK A Q+V+D+ ++ + +V Y L++ + + A L M+
Sbjct: 354 NTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKS 413
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
RI + Y T++ ++ + + +A +E +E +E T +NS+I+ + K GRL+
Sbjct: 414 LRIQLDRVCYNTLLAIYVKTGKYDEIATVCEE-MEKLGIEKDTVTYNSLINGYGKQGRLD 472
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEH 586
++ M P+ TY +LI+ Y A + ++ + K + G+K +
Sbjct: 473 MVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFK-------ESGLKADV 525
Query: 587 NLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
L +F+ L K G + + ++++ +M +
Sbjct: 526 VLFSSFIDTLAKNGLVECALSLLDEMMKMGI 556
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 96/231 (41%), Gaps = 12/231 (5%)
Query: 206 RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
++ LD + KPN+ + ++G L+ +A K+ E M L ++ + + L +
Sbjct: 371 QVVLDMEANNAKPNVVTYSTLMDGFSK-LEKYDEALKLREKMKSLRIQLDRVCYNTLLAI 429
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
Y G ++I + M + G V Y+SLI+GY K G L+ + + +M
Sbjct: 430 YVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQ------DMRA 483
Query: 326 SDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ TY ++ + + G N+ ++ + SG+ D + I GL
Sbjct: 484 QGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLD---FKESGLKADVVLFSSFIDTLAKNGL 540
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
+ A S+LDEM G + Y + A+ K E + D+ G+
Sbjct: 541 VECALSLLDEMMKMGIKPNVVTYNTIIDAFGKSKIFTEEDSDIGDMGIVGV 591
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 144/340 (42%), Gaps = 15/340 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N + C +++A+ + + G+RP SF L Y G ++
Sbjct: 223 PDVCKFNVLMHRLCKE-HKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFR 281
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSKETYCEV 336
L+ M E + YS LI+G K G L+ A++ L +C G + +D + T
Sbjct: 282 LKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG--LVPNDVTFTT---- 335
Query: 337 VKGFLQNGN-VKGLANLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
L NG+ V G A+L +E Q++ G+ D +I+ +G +A ++ EM
Sbjct: 336 ----LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM 391
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G Y + CKE A ++ ++ G++LD + ALI
Sbjct: 392 TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQV 451
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A R+M EA I +Y ++ G + + L E+ D V +N
Sbjct: 452 IEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVP-GVVTYNV 510
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+++ CK G++++A L M+ L P+D TY L+ G+
Sbjct: 511 LLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGH 550
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 43/246 (17%)
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
+ L L+ A + +E+ CG + + + CKEH+ EA L +I GL+ V
Sbjct: 201 MKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTV 260
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
+++ LI S + F L R M E R++ P++
Sbjct: 261 VSFNTLINGYCKSGNLDQGFRLKRFMMENRVF------------------PDVFT----- 297
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
++ +I+ CK G+L+DA + M PND T+ +LING+
Sbjct: 298 -------------YSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTG 344
Query: 559 QYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVF 618
+ + ++ ++ R KG+K + + + L K G ++V + + +
Sbjct: 345 RADLGMEIYQQMLR-------KGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLK 397
Query: 619 VDKWKY 624
DK+ Y
Sbjct: 398 PDKFTY 403
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 151/366 (41%), Gaps = 19/366 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG--VRPNESSFGFLA-YLYALKGLQ 272
+KP++ L G C V DA KV++ MS G V P+ + + L + LQ
Sbjct: 162 VKPDVVTYGILLNGLCKS-GHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQ 220
Query: 273 EKIVELESLMNEF-GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
+ I+ ++ M G + V Y+ L + ++G++ A + + ME+ +
Sbjct: 221 QAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIV------ARMEKEGVAPN 274
Query: 332 --TYCEVVKGFLQNGNVKGLANLIIEAQKLEPS--GIVVDRSVGFGIISACVNLGLSDKA 387
T ++ G + G V E + + P G V S C N+ D A
Sbjct: 275 VITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNV---DMA 331
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ EM G +Y + + R +A + +G +LD Y+ LI
Sbjct: 332 MELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGG 391
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ A+ L +M+ + +Y T+++GL + + L +++D +
Sbjct: 392 FCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDD-GCQP 450
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+ +++H +CKAG+ ++A R R M + +PN Y +LI+ + + + ++
Sbjct: 451 SVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLF 510
Query: 568 HEIKRK 573
E++ K
Sbjct: 511 DEMREK 516
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 122/301 (40%), Gaps = 12/301 (3%)
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG-VRPNESSFGFLA 263
C+I + + PN+ N + G C + + E E +V R N ++ LA
Sbjct: 260 CKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLA 319
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+ + +EL M + G V Y ++ISG + G L A C +M
Sbjct: 320 SAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDA------CTTAASM 373
Query: 324 EQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
+++ F + Y ++ GF + + L+ ++++ G+ D ++S
Sbjct: 374 KKAGFKLDAKAYNILIGGFCRKKKLHEAYELL---EEMKGVGLQPDVYTYNTLLSGLCKA 430
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G +L M GC + + + YCK +T EA ++ + + +Q + Y
Sbjct: 431 GDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIY 490
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ LI+ S++ A LF +MRE + +Y ++ GL + E +D + E
Sbjct: 491 NTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMRE 550
Query: 502 D 502
+
Sbjct: 551 E 551
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 139/343 (40%), Gaps = 19/343 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMS-VLGVRPNESSFGFLAYLYALKGLQEKIV 276
P+I N ++G C + V E M V G PN ++ LA + G
Sbjct: 201 PDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMAC 260
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA------SRTILLCLGGGNMEQSDFSK 330
++ + M + G + ++ +++I G ++G + +A RT+ ++ +
Sbjct: 261 KIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTV--------WPEARGNA 312
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY + FL NV L E + G D + F +IS G A +
Sbjct: 313 VTYSTLASAFLHCNNVDMAMELFHE---MADHGHRPDAVMYFTMISGLTQAGRLLDACTT 369
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
M G + Y + +C++ + EA +L+ ++ GLQ DV Y+ L+
Sbjct: 370 AASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCK 429
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ DF + L M + ++ T++ G + + + A + +++ R++ T
Sbjct: 430 AGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTD-EALRIFRSMDEARIQPNTV 488
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N++I CK+ ++ A + M N TY +L+ G
Sbjct: 489 IYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKG 531
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 159/385 (41%), Gaps = 76/385 (19%)
Query: 239 DAEKVIETMSVLGVRPNESSFGF-LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
DA ++ + M+ GV+P+E + ++ L L+ ++ +++ M E GF + YSS+
Sbjct: 203 DAVRLFDEMAGAGVKPDERVYAITISGLCKLRD-ADRALQVLGKMREAGFEPWELTYSSV 261
Query: 298 ISGYVKLGNLESASR------------------TILL---CLGGGNMEQSDFSKE----- 331
+ VK+ ++ A R T+L+ CL G + D E
Sbjct: 262 VDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDG 321
Query: 332 ------TYCEVVKGFLQNG---NVKGLANLIIEAQKLEPS---------GIVVDR--SVG 371
TY ++KG G L +IE Q L PS G++ D+
Sbjct: 322 VTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIE-QGLLPSTYEFNLVIKGLLRDKRWKDA 380
Query: 372 FGIISACVNLGLSD------------------KAHSILDEMNACGCSVGLGVYVPTLKAY 413
G++ V+ G+ D +A ++ D+M G + Y L Y
Sbjct: 381 IGLLKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGY 440
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C++ R EA +L ++ G + Y L++ I + F +A++L +MR+ +
Sbjct: 441 CEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGD 500
Query: 474 GSYLTIMTGLMENHR----PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+Y ++ GL +R E++ FL E T +NSII+ F KAG + A
Sbjct: 501 YTYNILINGLYMVNRVCEVDEMLKRFLSE-----GFVPTTMTYNSIINGFVKAGMMGSAF 555
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGY 554
R+M PN TY S I+GY
Sbjct: 556 GMYRQMRKKGITPNIVTYTSFIDGY 580
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 147/380 (38%), Gaps = 48/380 (12%)
Query: 213 LDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
+D P+++ + C Q + +A + + M GV+P+ ++ L Y KG
Sbjct: 388 VDTGVPDVFTYGCLIHWLCKH-QKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRM 446
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS--K 330
++ ++L S M + GF V Y++L+ GY+K ++A + M Q+ S
Sbjct: 447 DEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALL------NEMRQNGVSCGD 500
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY ++ G V + ++ ++ G V II+ V G+ A +
Sbjct: 501 YTYNILINGLYMVNRVCEVDEML---KRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGM 557
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+M G + + Y + YC+ + A +L++ + G+Q D+ Y+A I+
Sbjct: 558 YRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCK 617
Query: 451 SQDFQSAFS----LFRD---------------------MREA----------RIYDLKGS 475
+ A L +D M EA R+
Sbjct: 618 QGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEI 677
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
Y T++ G + E++ + V + ++ H C++G ++ AKR L M
Sbjct: 678 YTTLIDGFSKVGNVAFALELYSEMMAN-HVIPDDKTFTALTHGLCRSGDIDGAKRLLDDM 736
Query: 536 IFLQFEPNDQTYLSLINGYV 555
L PN TY LIN V
Sbjct: 737 RRLDVSPNIVTYNMLINACV 756
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 8/229 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PNI + ++G C A K++ + G++P+ +++ + +G +
Sbjct: 566 ITPNIVTYTSFIDGYCR-TNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRA 624
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L+ + G + + Y+S ++GY L + AS+ + ++ E Y
Sbjct: 625 LHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMI----KQRVVADTEIYTT 680
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ GF + GNV L E + + ++ D + G D A +LD+M
Sbjct: 681 LIDGFSKVGNVAFALELYSE---MMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMR 737
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
S + Y + A ++ + EA QL ++ SSG+ D YD L
Sbjct: 738 RLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 3/201 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMN-ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
++ V + D+A + D+M A G + + + + YC +A L ++ S
Sbjct: 261 VVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSD 320
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G+ Y LI+ + L R M E + + ++ GL+ + R +
Sbjct: 321 GVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDA 380
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
L VV+ +V T + +IH CK +L +A +M +P+ TY SL+
Sbjct: 381 IGLLKLVVDTGVPDVFT--YGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLL 438
Query: 553 GYVTAEQYFSVLMMWHEIKRK 573
GY + L ++ E+ K
Sbjct: 439 GYCEKGRMDEALKLYSEMPDK 459
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 103/253 (40%), Gaps = 41/253 (16%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G+V D + +I GL A + DEM CGC + Y L CKE R +A
Sbjct: 11 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70
Query: 423 TQLVMDISSSG-----------------------------------LQLDVGNYDALIEA 447
L+ ++ G L+ D+ Y+ LI+
Sbjct: 71 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
D A L+ DM I+ +Y ++ E + E FLDE++ + +
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI-NKGILP 189
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY---FSVL 564
+NSII +C++G + ++ L++M+ + P+ TY +LI+GY+ ++ F +L
Sbjct: 190 NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 249
Query: 565 MMWHEIKRKISTD 577
M K K+ D
Sbjct: 250 NMME--KEKVQPD 260
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 135/333 (40%), Gaps = 55/333 (16%)
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKIVELESLMNEF-- 285
C GL +SDA +V + M G P+ ++ L L GL + ++++ E L+NE
Sbjct: 27 CRAGL--MSDALRVRDEMVGCGCLPDVVTYNTL-----LNGLCKERRLLDAEGLLNEMRE 79
Query: 286 -GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNG 344
G + +++LI GY G L+ A + L ++ TY ++ G + G
Sbjct: 80 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN----QRLRPDIVTYNTLIDGMCRQG 135
Query: 345 NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
++ +L + E V S+ +I + G + A LDEM G +
Sbjct: 136 DLDKANDLWDDMHSREIFPNHVTYSI---LIDSHCEKGQVEDAFGFLDEMINKGILPNIM 192
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y +K YC+ ++ + + + + + D+ Y+ LI I AF L M
Sbjct: 193 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 252
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
+ ++ +P+++ +N +I+ F G
Sbjct: 253 EKEKV------------------QPDVVT------------------YNMLINGFSVHGN 276
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+++A +M EP+ TY+S+ING+VTA
Sbjct: 277 VQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTA 309
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PNI N+ ++G C +VS +K ++ M V V P+ ++ L + Y + +
Sbjct: 189 PNIMTYNSIIKGYCRS-GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 247
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI-LLCLGGGNMEQSDFSKETYCEV 336
L ++M + +V Y+ LI+G+ GN++ A +C G + + TY +
Sbjct: 248 LLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG-----IEPDRYTYMSM 302
Query: 337 VKGFLQNGNVK 347
+ G + GN K
Sbjct: 303 INGHVTAGNSK 313
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 109/300 (36%), Gaps = 78/300 (26%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N L G C + + DAE ++ M GV P+ +F L + Y ++G +K ++
Sbjct: 49 PDVVTYNTLLNGLCKE-RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 107
Query: 278 L-ESLMNEF-------------GFSSQ---------------------MVFYSSLISGYV 302
L ++++N+ G Q V YS LI +
Sbjct: 108 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 167
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
+ G +E A + + G + + TY ++KG+ ++GNV
Sbjct: 168 EKGQVEDAFGFLDEMINKGILP----NIMTYNSIIKGYCRSGNVS--------------- 208
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
K L +M S L Y + Y KE + +A
Sbjct: 209 -----------------------KGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 245
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+L+ + +Q DV Y+ LI + Q A +F M I + +Y++++ G
Sbjct: 246 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 305
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 161/400 (40%), Gaps = 29/400 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ ++ + C +++ AE + M GV PN ++ L Y Y+ G ++
Sbjct: 250 IPPDFVTYSSVVHALCKA-RAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEA 308
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V + M +V S L+ K G ++ A R + + + FS Y
Sbjct: 309 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA-RDVFDTMAMKGQNPNVFS---YTI 364
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ G + + +L + GI D +I A N G+ DKA I +EM
Sbjct: 365 MLNGYATKGCLVDMTDLF---DLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 421
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y + A C+ + +A + + G+ D Y LI+ T
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD---- 511
A L ++ ++ + +I+ L + R +M A + + D V V H
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGR--VMDA---QNIFDLTVNVGLHPTAVV 536
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
++ ++ +C G++E A R M+ EPND Y +L+NGY + L ++ E+
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML 596
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
QKGIK LY ++ G F+A V K
Sbjct: 597 -------QKGIK-----PSTILYNIIIDGLFEAGRTVPAK 624
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/391 (19%), Positives = 148/391 (37%), Gaps = 52/391 (13%)
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
C YG + +A V +TM++ G PN S+ + YA KG + +L LM G +
Sbjct: 335 CKYG--KIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
+ ++ LI Y G L+ A
Sbjct: 393 DIYTFNVLIKAYANCGMLDKA--------------------------------------- 413
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
+I ++ G+ D +I+A +G D A ++M G + Y
Sbjct: 414 ---MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ +C +A +L+ +I ++G+ LD+ + ++I A ++F +
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+ Y +M G + E D +V +E + ++++ +CK GR+++
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS-AGIEPNDVVYGTLVNGYCKIGRIDEGL 589
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
R M+ +P+ Y +I+G A + + +HE+ + GI
Sbjct: 590 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT-------ESGIAMNKCTY 642
Query: 590 DAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
+ L L K FD + + ++ + M V ++
Sbjct: 643 NIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 137/348 (39%), Gaps = 46/348 (13%)
Query: 218 PNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
PN+++ L G Y + + D + + M G+ P+ +F L YA G+ +K +
Sbjct: 357 PNVFSYTIMLNG--YATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAM 414
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+ + M + G +V Y ++I+ ++G ++ A + G K Y +
Sbjct: 415 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD----KYAYHCL 470
Query: 337 VKGFLQNGNVKGLANLIIEA----------------QKLEPSGIVVDRSVGFGIISACVN 380
++GF +G++ LI E L G V+D I VN
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ---NIFDLTVN 527
Query: 381 LGLS-------------------DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
+GL +KA + D M + G VY + YCK R E
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
L ++ G++ Y+ +I+ + A F +M E+ I K +Y ++
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLR 647
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
GL +N R A FL + + V++ N++I + R+E+AK
Sbjct: 648 GLFKN-RCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAK 694
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 4/202 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS- 432
++ C + A + ++ G V + + LK +C+ RT EA +++ +
Sbjct: 117 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPEL 176
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE--ARIYDLKGSYLTIMTGLMENHRPE 490
G DV +Y L+++ A L R M E A +Y T++ G +
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVN 236
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
E+V+ + ++S++HA CKA ++ A+ LR+M+ PN+ TY +L
Sbjct: 237 KACDLFKEMVQRG-IPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNL 295
Query: 551 INGYVTAEQYFSVLMMWHEIKR 572
I GY + Q+ + ++ E++R
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMRR 317
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 88/236 (37%), Gaps = 11/236 (4%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
L V DA+ + + +G+ P + L Y L G EK + + M G V
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLAN 351
Y +L++GY K+G ++ M Q T Y ++ G + G
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFR------EMLQKGIKPSTILYNIIIDGLFEAGRT---VP 622
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++ ++ SGI +++ ++ D+A + E+ A + + +
Sbjct: 623 AKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIA 682
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ R EA L IS SGL V Y +I I + A +F M+ A
Sbjct: 683 GMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/474 (20%), Positives = 195/474 (41%), Gaps = 55/474 (11%)
Query: 118 DNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPF 177
+ HNL +F +++ +KNPK FQ +LGS+ +N + +L + M N
Sbjct: 51 NKHNLVSSFNRLLH--QKNPKPSIFQ-FGKILGSLVKSNHYSTVVSLHRQMEFNGITSDL 107
Query: 178 ELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSV 237
+ + + N ++F V + ++ + PN+ ++G C Q +
Sbjct: 108 VILSILINCFSQLGQNPLSF-SVLAKILKMGYE-------PNVITLTTLIKGLCLKGQ-I 158
Query: 238 SDAEKVIETMSVLGVRPNESSFGFL-----------AYLYALKGLQEKIV---------- 276
A + + + LG N+ S+G L A L L+ + K+V
Sbjct: 159 HQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTI 218
Query: 277 --------------ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+L S M G S +V Y++LISG+ +G ++ A+
Sbjct: 219 IDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDL----FNKMI 274
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
E + + T+ +V GF + +K N++ K GI D ++ +
Sbjct: 275 FENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMK---QGIKPDVFTYNSLMDRYCLVK 331
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+KA I + ++ G + + Y + +CK + EA L ++ + + DV Y+
Sbjct: 332 EVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYN 391
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
+LI+ A L +M + + K +Y +I+ L +NH+ + A L ++ +D
Sbjct: 392 SLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKM-KD 450
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
++ + +++ CK GRLEDA+ ++ + + Y ++I G+ +
Sbjct: 451 EGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCS 504
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 117/287 (40%), Gaps = 12/287 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+Y N ++G C + + +A+ V+ M G++P+ ++ L Y L K
Sbjct: 278 INPNVYTFNILVDGFCKE-RRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKA 336
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ + +++ G + + YS +I G+ K+ ++ A M ++ + TY
Sbjct: 337 KHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLF------KEMHCNNIIPDVVTY 390
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G + G + L+ E + G+ D+ I+ A DKA ++L +
Sbjct: 391 NSLIDGLCKLGKISYALKLVDE---MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 447
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G + Y + CK R +A + D+ G LDV Y A+I+ +
Sbjct: 448 MKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGL 507
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
F + L M E +Y I+ L + + L E++
Sbjct: 508 FDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMI 554
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 156/402 (38%), Gaps = 54/402 (13%)
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
+G PN + L LKG + ++ + GF V Y +LI+G K+G +
Sbjct: 136 MGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSA 195
Query: 310 ASR------------------TIL--LCLGGGNMEQSDFSKE-----------TYCEVVK 338
A + TI+ +C E D E TY ++
Sbjct: 196 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALIS 255
Query: 339 GFLQNGNVKGLANLIIEA--QKLEPS----GIVVDRSVGFGIISACVNLGLSDKAHSILD 392
GF G +K +L + + + P+ I+VD GF C L + A ++L
Sbjct: 256 GFCIVGKMKDATDLFNKMIFENINPNVYTFNILVD---GF-----CKERRLKE-AKNVLA 306
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M G + Y + YC +A + IS G+ ++ +Y +I +
Sbjct: 307 MMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIK 366
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
A +LF++M I +Y +++ GL + + +DE + D V +
Sbjct: 367 KVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDE-MHDRGVPHDKITY 425
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
NSI+ A CK +++ A L +M +P+ TY +L++G + +++ ++
Sbjct: 426 NSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLL- 484
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
KG + N+ A + G FD + ++ K +E
Sbjct: 485 ------VKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEE 520
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 22/250 (8%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+++E +GI D + +I+ LG + + S+L ++ G + +K C +
Sbjct: 96 RQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLK 155
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+ +A Q + + G L+ +Y LI +A L R + + Y
Sbjct: 156 GQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMY 215
Query: 477 LTIMTGL----MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
TI+ + + N +L + + + + V +N++I FC G+++DA
Sbjct: 216 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT-----YNALISGFCIVGKMKDATDLF 270
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIK---FEHN-L 588
+MIF PN T+ L++G+ + E K ++ ++GIK F +N L
Sbjct: 271 NKMIFENINPNVYTFNILVDGFCKERR-------LKEAKNVLAMMMKQGIKPDVFTYNSL 323
Query: 589 VDAFLYALVK 598
+D Y LVK
Sbjct: 324 MDR--YCLVK 331
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 133/325 (40%), Gaps = 18/325 (5%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
L V++A + E M G+ P+ S+ L + KG +K + + E G V
Sbjct: 442 LGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVT 501
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK----GL 349
Y+ LI G+ K G+ E A + + N+ +D T+ V+ G + G V L
Sbjct: 502 YTLLIDGFFKKGDSERAF-VVFEQMMAANIAPTD---HTFNTVINGLGKTGRVSETQDKL 557
Query: 350 ANLIIEAQKLEPSGIVVDRSVGF-GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
N I + V S+ + II G D A EM G S + Y
Sbjct: 558 NNFIKQG--------FVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTS 609
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ CK ++ A ++ D+ G++LDV Y ALI+ D +SA F ++ +
Sbjct: 610 LIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIG 669
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
+ Y ++++G + + E E++++ +V + SII K G+L A
Sbjct: 670 LTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKN-KVPCDLQVYTSIIGGLLKEGKLSLA 728
Query: 529 KRTLRRMIFLQFEPNDQTYLSLING 553
M+ P+ Y LING
Sbjct: 729 LDLYSEMLSKDIVPDIVMYTVLING 753
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 147/386 (38%), Gaps = 52/386 (13%)
Query: 188 CRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETM 247
C K NFV L++ +E + L N+ + ++G C L V+ A ++ + +
Sbjct: 300 CVKQGNFVEALRLKDEMVSVGL-------PMNVIVTRSLMKGYCV-LGDVNLALQLFDEV 351
Query: 248 SVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL 307
GV P+ F L + G EK EL + M G + +SL+ G
Sbjct: 352 VEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEG------- 404
Query: 308 ESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
F ++ E G G+ N++ L+ G
Sbjct: 405 --------------------FHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLG---- 440
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
LG ++A ++ ++M + G + L Y + +CK+ +A ++
Sbjct: 441 ------------ELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLK 488
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
I GL+ + Y LI+ D + AF +F M A I ++ T++ GL +
Sbjct: 489 SILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTG 548
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
R L+ ++ V +NSII F K G ++ A R M P+ TY
Sbjct: 549 RVSETQDKLNNFIKQGFVSTSI-TYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITY 607
Query: 548 LSLINGYVTAEQYFSVLMMWHEIKRK 573
SLI+G + + L M ++K K
Sbjct: 608 TSLIDGLCKSNKIGLALEMHSDMKYK 633
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 85/225 (37%), Gaps = 33/225 (14%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G V + +I ACV G +A + DEM + G + + V +K YC A
Sbjct: 285 GWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLA 344
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
QL ++ G+ DV + LI D + A+ L+ M+ I +++ G
Sbjct: 345 LQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEG 404
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHD------------------------------- 511
E + E DE VE V T++
Sbjct: 405 FHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSL 464
Query: 512 --WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N++I CK G ++ A L+ ++ +PN TY LI+G+
Sbjct: 465 VSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGF 509
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 82/219 (37%), Gaps = 42/219 (19%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+++A V + A + DEM G ++A KE + E + + G
Sbjct: 191 LLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRG 250
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH------ 487
L++D Y L++A D A L ++MRE KG+Y ++ ++
Sbjct: 251 LEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEAL 310
Query: 488 --RPELMAAFL---------------------------DEVVED---PRVEVKTHDWNSI 515
+ E+++ L DEVVE P V + ++ +
Sbjct: 311 RLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVI----FSVL 366
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
I+ K G +E A RM + +PN SL+ G+
Sbjct: 367 INGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGF 405
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/491 (20%), Positives = 189/491 (38%), Gaps = 22/491 (4%)
Query: 81 TNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLL 140
N D AWK F L + L P S+I L + F +E +
Sbjct: 265 AGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQ----METERAVP 320
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
+T++ +A A+ L+ K R +P + ++ K L +
Sbjct: 321 CAYAYNTMIMGYGSAGQFENAYKLLD-QLKERGCIPSVVSFNSILTCLGKKRKVDEALTL 379
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
FE + A +PN N ++ C V +A + + M G+ PN +
Sbjct: 380 FEAMKKDA--------EPNSSTYNIIIDMLCMA-GKVEEAYMIRDEMEHAGLFPNLLTVN 430
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
+ E E+ ++ G + V Y SLI G K GN++ A R L
Sbjct: 431 IMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDT 490
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
G+ + + Y +++ F +G + + E + G D ++ +
Sbjct: 491 GH----NANPVVYTSLIRNFFMHGRKEDGHKIFKEMNR---RGCQPDLTLLNTYMDCVFK 543
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G +K +I +++ G + Y + K + E + + + G LD
Sbjct: 544 AGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARA 603
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y+A+++ S A+ + +M+ R+ +Y +I+ GL + R + A L E
Sbjct: 604 YNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLD-EAYMLFEEA 662
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+ +E+ ++S+I F K GR+++A L M+ PN T+ SL++ V AE+
Sbjct: 663 KSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEI 722
Query: 561 FSVLMMWHEIK 571
L+ + +K
Sbjct: 723 NEALICFQSMK 733
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 147/358 (41%), Gaps = 13/358 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++ C + A ++ ET S G PN ++ L KG +
Sbjct: 424 PNLLTVNIMVDRLCKA-KKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYR 482
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK-ETYCEV 336
L M + G ++ V Y+SLI + G E + G Q D + TY +
Sbjct: 483 LFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGC--QPDLTLLNTYMDC 540
Query: 337 VKGFLQNGNV-KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V + G+V KG A + ++ G + D +I G + + SI M
Sbjct: 541 V---FKAGDVEKGRAIF----EDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMK 593
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G ++ Y + +CK + +A +++ ++ + V Y ++I+
Sbjct: 594 QQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLD 653
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A+ LF + + I Y +++ G + R + L+E+++ + + WNS+
Sbjct: 654 EAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKK-GLTPNVYTWNSL 712
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ A KA + +A + M ++ PN TY LING ++Y + W E++++
Sbjct: 713 MDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQ 770
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 160/417 (38%), Gaps = 59/417 (14%)
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
V +L ++RN + AAP F + + + +P + + L + + + A KV EE
Sbjct: 84 VIPVLRTLRNPSLAAPFF--LASSAASPHPLPADAYNAVLPFL---SHDLAAMEKVLEEM 138
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
L + PN AC A L + + DAE+VI M L RP S++ L
Sbjct: 139 ------SVLGYGVPNP-AC-ADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIG 190
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
A E+ +EL M E G+ + +++L+ + G +E A +
Sbjct: 191 AMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALV---------- 240
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG-FGIISACVNLGL 383
+ VKG LEP ++ + + FG G
Sbjct: 241 ----------DEVKG-----------------SCLEPDIVLYNVCIDCFG------KAGN 267
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
D A E+ + G Y + CK R +EA +L + + Y+
Sbjct: 268 VDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNT 327
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
+I ++ F++A+ L ++E S+ +I+T L + + + + + +D
Sbjct: 328 MIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKD- 386
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
E + +N II C AG++E+A M PN T +++ A+++
Sbjct: 387 -AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKF 442
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 36/200 (18%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I A ++A +L +M G VG+ ++ ++A +E R A LV ++ S
Sbjct: 188 LIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSC 247
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
L+ D+ Y+ I+ + + A+ F +++ + +P
Sbjct: 248 LEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKS------------------QGLKP---- 285
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
D+V + S+I CKAGRL +A+ +M + P Y ++I G
Sbjct: 286 ---DDV-----------SYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMG 331
Query: 554 YVTAEQYFSVLMMWHEIKRK 573
Y +A Q+ + + ++K +
Sbjct: 332 YGSAGQFENAYKLLDQLKER 351
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 106/267 (39%), Gaps = 8/267 (2%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ N ++ C + V + E + G P+ S+ L + G +
Sbjct: 528 QPDLTLLNTYMD-CVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETS 586
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+ M + GF+ Y++++ G+ K G L+ A L +++ + TY +
Sbjct: 587 SIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEV----LEEMKVKRVPPTVATYGSI 642
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ G + + L EA+ GI ++ V +I +G D+A+ IL+EM
Sbjct: 643 IDGLAKIDRLDEAYMLFEEAKS---KGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMK 699
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + + + + A K EA + + Y LI Q +
Sbjct: 700 KGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNK 759
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGL 483
AF +++M++ + +Y T++ GL
Sbjct: 760 AFVFWQEMQKQGLVPNVVTYTTMIAGL 786
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 130/325 (40%), Gaps = 12/325 (3%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G+ P+ ++ Y G+ + LM G Y++L+ G + G + A
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDR 368
+ G + Y +V G + G + L+ E + EP+ +V +
Sbjct: 162 MAVFV----GMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYN- 216
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+I N G + A + + M+ CS + Y + CK + A L
Sbjct: 217 ----ALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ +GL+ +V Y ALI+ Q AF L M + ++ ++ L + +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
E FL +V+ V+V + S+I CK G+++ A +++MI F P+ +Y
Sbjct: 333 VEEAQLFLGSLVKK-GVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYS 391
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRK 573
SLI+G ++ +M ++ K
Sbjct: 392 SLIDGLCRQKKLSQATLMLEDMMEK 416
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 130/338 (38%), Gaps = 44/338 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PNI NA ++G C + + A KV E M PN ++ L + G E+ +
Sbjct: 209 EPNIVVYNALIDGYCNAGE-MEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L S M E G +V Y++LI G G+L+ A R + L
Sbjct: 268 VLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHL-------------------- 307
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+E +G+V + +I A ++A L +
Sbjct: 308 ----------------------METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVK 345
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G V VY + CK + A +L+ + S G D +Y +LI+ +
Sbjct: 346 KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A + DM E I +Y I+ L+ E D+++ + + +
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIAT-GINPDIVTYTVFV 464
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++C+ GR+EDA+ + +M+ PN TY +LI GY
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 142/350 (40%), Gaps = 19/350 (5%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y++LI+ Y G++ +A + + L G S Y V G+ + G + +
Sbjct: 75 YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDS----YAYTSFVLGYCRAGMLTHACRVF 130
Query: 354 IEAQKLEP-SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ L P G + ++ + G+ +A ++ M A C+ VY +
Sbjct: 131 V----LMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHG 186
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
C+ RT EA L+ + S+G + ++ Y+ALI+ + + + A +F M R
Sbjct: 187 LCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPN 246
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+Y ++ GL ++ + E +VE +E + ++I C G L+ A R L
Sbjct: 247 VRTYTELIHGLCKSGKVERAMVLFSRMVE-AGLEPNVVTYTALIQGQCNEGHLQCAFRLL 305
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAF 592
M PND T+ LI+ E+ E + + + +KG+K + +
Sbjct: 306 HLMETNGLVPNDWTFSVLIDALCKREKV-------EEAQLFLGSLVKKGVKVNEVVYTSL 358
Query: 593 LYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAF--MENHKKLKVAKL 640
+ L K G DA ++++K D Y + KKL A L
Sbjct: 359 IDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL 408
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 10/250 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA-YLYALKGLQEK 274
++PN+ A ++G C + A +++ M G+ PN+ +F L L + ++E
Sbjct: 278 LEPNVVTYTALIQGQC-NEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+ L SL+ + G V Y+SLI G K G +++A + + G + + +Y
Sbjct: 337 QLFLGSLVKK-GVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA----HSYS 391
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G + K L+ + + + GI II V S+ I D+M
Sbjct: 392 SLIDGLCRQ---KKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
A G + + Y +++YC+E R +A +++ + G+ ++ Y+ LI
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508
Query: 455 QSAFSLFRDM 464
AFS F M
Sbjct: 509 SQAFSTFEVM 518
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 183/441 (41%), Gaps = 64/441 (14%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA-----------YL 265
+P++ + + G C VS+A +I+ M G +P+E ++G + L
Sbjct: 201 RPDLVTVSTLINGLCLK-GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259
Query: 266 YALKGLQEKIVELE---------------------SLMNEF---GFSSQMVFYSSLISGY 301
+ ++E+ ++ SL NE G + +V YSSLI G
Sbjct: 260 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 319
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV---KGLANLIIEAQK 358
G + ++ + +G + T+ ++ F++ G + K L N +I +
Sbjct: 320 CNDGKWDDGAKMLREMIGRNIIPDV----VTFSALIDVFVKEGKLLEAKELYNEMI-TRG 374
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+ P I + + C++ +A+ + D M + GC + Y + +YCK R
Sbjct: 375 IAPDTITYNSLIDGFCKENCLH-----EANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 429
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
+ +L +ISS GL + Y+ L+ S +A LF++M + +Y
Sbjct: 430 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 489
Query: 479 IMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++ GL +N EL A + E ++ R+ + +N IIH C A +++DA +
Sbjct: 490 LLDGLCDNG--ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 547
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN-LVDAFLYAL 596
+P+ TY +I G M++ RK+ DG F +N L+ A L
Sbjct: 548 KGVKPDVVTYNVMIGGLCKKGSLSEADMLF----RKMKEDGCTPDDFTYNILIRAHL--- 600
Query: 597 VKGGFFDAVMQVVEKSQEMKV 617
GG ++ VE +EMKV
Sbjct: 601 --GG--SGLISSVELIEEMKV 617
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 151/371 (40%), Gaps = 21/371 (5%)
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
LG P+ +F L + L+G + V L M E +V S+LI+G G +
Sbjct: 163 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 222
Query: 310 ASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A I M + F + TY V+ ++GN +L + ++ VV
Sbjct: 223 ALVLI------DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 276
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
S+ +I + G D A S+ +EM G + Y + C + + + +++
Sbjct: 277 YSI---VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 333
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM-EN 486
++ + DV + ALI+ + A L+ +M I +Y +++ G EN
Sbjct: 334 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 393
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
E F +++ E ++ +I+++CKA R++D R R + PN T
Sbjct: 394 CLHEANQMF--DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 451
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVM 606
Y +L+ G+ + + + ++ E+ +G+ L L G + +
Sbjct: 452 YNTLVLGFCQSGKLNAAKELFQEMV-------SRGVPPSVVTYGILLDGLCDNGELNKAL 504
Query: 607 QVVEKSQEMKV 617
++ EK Q+ ++
Sbjct: 505 EIFEKMQKSRM 515
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 137/344 (39%), Gaps = 12/344 (3%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
VS+A +++ M + RP+ + L LKG + + L M E+GF V Y
Sbjct: 185 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 244
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLII 354
+++ K GN SA L ME+ + Y V+ ++G+ +L
Sbjct: 245 VLNRLCKSGN--SALALDLF----RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 298
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
E +E GI D +I N G D +L EM + + + +
Sbjct: 299 E---MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 355
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
KE + EA +L ++ + G+ D Y++LI+ A +F M
Sbjct: 356 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 415
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+Y ++ + R + E+ + T +N+++ FC++G+L AK +
Sbjct: 416 TYSILINSYCKAKRVDDGMRLFREISSKGLIP-NTITYNTLVLGFCQSGKLNAAKELFQE 474
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
M+ P+ TY L++G + L ++ ++++ T G
Sbjct: 475 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 518
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 166/410 (40%), Gaps = 40/410 (9%)
Query: 193 NFVAFLKVFEECCR-------IALDENL--DFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
N V F + CR +AL + + D ++PN ++G C +VS +
Sbjct: 178 NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 237
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGL------QEKIVELESLMNEFGFSSQMVFYSSL 297
+ V ++PN + + G E L+ ++ S +V Y++L
Sbjct: 238 RKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNAL 297
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIE 355
I+ +VK G A L G + S TY ++ GF + + ++ ++
Sbjct: 298 INAFVKEGKFFEAEELYDEMLPRGIIP----STITYSSMIDGFCKQNRLDAAEHMFYLMA 353
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
+ P I + +I+ D +L EM G Y + +C+
Sbjct: 354 TKGCSPDIITFNT-----LIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 408
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
A L+ ++ SSG+ +V + L++ + + A +F+ M+++++ D+ S
Sbjct: 409 VGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM-DIDAS 467
Query: 476 ------------YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
Y +++GL+ N L A L E + + T +NS+IH CK
Sbjct: 468 HPFNGVEPDVQTYNILISGLI-NEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQS 526
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
RL++A + M F PN T+ +LINGY A + L ++ E+ R+
Sbjct: 527 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 576
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
C + + + C+E R EA L+ + GLQ + Y +++ D SA
Sbjct: 175 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234
Query: 459 SLFRDMREAR-------IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+L R M E I+ L+ ++ G + R L E++E ++
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLE-RRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVT 293
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N++I+AF K G+ +A+ M+ P+ TY S+I+G+
Sbjct: 294 YNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGF 336
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 132/369 (35%), Gaps = 55/369 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ ++ ++G C + AE + M+ G P+ +F L Y + ++
Sbjct: 324 PSTITYSSMIDGFCKQ-NRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIK 382
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M E G + + Y++LI G+ ++G+L +A + + G T ++
Sbjct: 383 LLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNV----VTCNTLL 438
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-----------IISACVNLGLSDK 386
G NG +K + QK S + +D S F +IS +N G +
Sbjct: 439 DGLCDNGKLKDALEMFKAMQK---SKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLE 495
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + +EM G Y + CK+ R EATQ+ + S +V + LI
Sbjct: 496 AEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 555
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ LF +M I +Y+T+
Sbjct: 556 GYCKAGRVDDGLELFCEMGRRGIVANAITYITL--------------------------- 588
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
IH F K G + A + M+ P+ T +++ G + E+ + M
Sbjct: 589 ---------IHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAM 639
Query: 567 WHEIKRKIS 575
+++ +
Sbjct: 640 LEDLQMSVG 648
>gi|3152594|gb|AAC17075.1| Contains repeats similar to RECA protein gb|L26100 from
Acinetobacter calcoaceticus [Arabidopsis thaliana]
Length = 566
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 137/332 (41%), Gaps = 44/332 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN+ L C + A +VIE M G+ P+ S++ +L +G +
Sbjct: 93 KPNVAHSTQLLYDLCKA-NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAM 151
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+L M + G+ S V Y++L+ G LG+L + +
Sbjct: 152 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQS-----------------------LQF 188
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V+ +Q G L P+ + F + +A G +D+A +LDE+
Sbjct: 189 VERLMQKG--------------LAPNAF----TYSFLLEAAYKERG-TDEAVKLLDEIIV 229
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G L Y L +CKE RT +A L ++ + G + +V +Y+ L+ ++
Sbjct: 230 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 289
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDWNSI 515
A SL +M +Y ++ L + R E L E+ + + + V +N +
Sbjct: 290 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 349
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
I CK G+++ + L MI+ + +PN+ TY
Sbjct: 350 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY 381
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 147/372 (39%), Gaps = 17/372 (4%)
Query: 192 SNFVAFLKVFEECCRI-ALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEK 242
SN V + + C + +L+++L F++ PN + + LE Y + +A K
Sbjct: 164 SNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAA-YKERGTDEAVK 222
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+++ + V G PN S+ L + +G + + L + GF + +V Y+ L+
Sbjct: 223 LLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLC 282
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
G E A+ ++L + GG+ S TY ++ +G + ++ E K
Sbjct: 283 CDGRWEEAN-SLLAEMDGGDRAPSVV---TYNILINSLAFHGRTEQALQVLKEMSKGNHQ 338
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH-RTAE 421
V S I C G D LDEM C G Y + + C+ + + E
Sbjct: 339 FRVTATSYNPVIARLCKE-GKVDLVVKCLDEMIYRRCKPNEGTY-NAIGSLCEHNSKVQE 396
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A ++ +S+ Y ++I + + +AF L +M +Y ++
Sbjct: 397 AFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIR 456
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
GL L + E + ++N++I CK R + A M+ +
Sbjct: 457 GLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRM 516
Query: 542 PNDQTYLSLING 553
PN+ TY L+ G
Sbjct: 517 PNETTYAILVEG 528
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
I + C N G D A I EM GC Y + CK +T EA +L ++ + G
Sbjct: 162 IKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKG 221
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
V Y L+ + + A LF M++ I +Y ++M GL +N L A
Sbjct: 222 CSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNG-GSLEA 280
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
L E++ R + ++++I+ CK G+L +A TL RM +P+ Y +ING
Sbjct: 281 MELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIING 340
Query: 554 YVTAEQY 560
+ ++
Sbjct: 341 FCNIRKF 347
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 128/321 (39%), Gaps = 26/321 (8%)
Query: 247 MSVLGVRPNESSFGFL-AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M +GVR + S L L G + E+ M + G Y +LI+G KLG
Sbjct: 146 MREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLG 205
Query: 306 NLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQK--LEP 361
A M+ S TY ++ G Q GNV L + +K +EP
Sbjct: 206 KTFEAKELF------KEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEP 259
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
+ + S+ G+ C N G S +A +L+ M + Y + CKE + AE
Sbjct: 260 N-VFTYSSLMDGL---CKNGG-SLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAE 314
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL---- 477
A + + + GL+ D G Y +I + FQ A + +M +I + ++
Sbjct: 315 AVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVK 374
Query: 478 ---TIMTGLMENHRPELMAAFLDEVVEDPR-VEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
++ GL N L +F + R + + ++S++ FCK G L A R
Sbjct: 375 LNNMVVQGLCTN--GNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFD 432
Query: 534 RMIFLQFEPNDQTYLSLINGY 554
M+ P+ + +++ G+
Sbjct: 433 EMVLDGCVPDHGIWSAVVGGF 453
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 98/227 (43%), Gaps = 5/227 (2%)
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
A +I ++ E S FG+ IS V+ A +L+ M C + +++
Sbjct: 31 AKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLS 90
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ Y + H +A ++ ++ G + +Y ++ + + A S ++ MRE
Sbjct: 91 ICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMG 150
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR--VEVKTHDWNSIIHAFCKAGRLE 526
+ S ++ L +N + AAF + E P+ + ++ + ++I+ CK G+
Sbjct: 151 VRQSVVSLNVLIKALCKNS-GTIDAAF-EIFREMPKRGCDPDSYTYGTLINGLCKLGKTF 208
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+AK + M P+ TY L++G A + ++ ++K+K
Sbjct: 209 EAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKK 255
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 143/360 (39%), Gaps = 38/360 (10%)
Query: 100 FPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSM-RNANTA 158
F KP S I+ + L + + LK A + Y+ E + +++ L+ ++ +N+ T
Sbjct: 114 FGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQ-SVVSLNVLIKALCKNSGTI 172
Query: 159 APAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE--------------- 203
AF + + M K +G + +C+ F A ++F+E
Sbjct: 173 DAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEA-KELFKEMDTKGCSPSVVTYSC 231
Query: 204 -----CCRIALDENL---DFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVL 250
C +DE + D MK PN++ ++ ++G C S+ +A +++E M
Sbjct: 232 LMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSL-EAMELLEMMVRK 290
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL-ES 309
+PN ++ L +G + VE M G Y +I+G+ + E+
Sbjct: 291 RHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEA 350
Query: 310 ASRTILLCLGGGNMEQSDFSKETYCE--VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A+ + LG + + +S VV+G NGN+ L I + GI +D
Sbjct: 351 ATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYI---GMRTRGISID 407
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
++ G KA I DEM GC G++ + + + EA + ++
Sbjct: 408 AGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFESIV 467
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 133/304 (43%), Gaps = 7/304 (2%)
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
+G+ PN +F + +G ++ E+ M G+ + ++SLI G K G E
Sbjct: 269 MGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEK 328
Query: 310 ASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRS 369
A R L + N + + TY ++ G+ + + L+ +++ G+V + +
Sbjct: 329 AFRLFLKLVRSENHKPNVL---TYTAMISGYCREDKLNRAEMLL---SRMKEQGLVPNTN 382
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
+I G ++A+ +++ M++ G S L Y + CK R EA +++ D
Sbjct: 383 TYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDG 442
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+GL+ D Y+ L+ ++ + A +LF M + I SY T++ +R
Sbjct: 443 FQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRM 502
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+ F +E V + + S+I +C+ G L A + R+ P+ TY +
Sbjct: 503 KESEMFFEEAVRIGIIPT-NKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGA 561
Query: 550 LING 553
+I+G
Sbjct: 562 IISG 565
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 8/263 (3%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN+ A + G C ++ AE ++ M G+ PN +++ L + G E+
Sbjct: 343 KPNVLTYTAMISGYCRE-DKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAY 401
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+L +LM+ GFS + Y+++++G K G ++ A + +L G N + D K TY +
Sbjct: 402 DLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYK--MLEDGFQNGLKPD--KFTYNIL 457
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ + N++ L K+ GI D +I+ ++ +E
Sbjct: 458 MSEHCKQENIRQALALF---NKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVR 514
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G Y + YC+E A + +S G D Y A+I
Sbjct: 515 IGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDE 574
Query: 457 AFSLFRDMREARIYDLKGSYLTI 479
A SL+ M E + + + +T+
Sbjct: 575 ARSLYDSMIEKGLVPCEVTRITL 597
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 72/378 (19%), Positives = 136/378 (35%), Gaps = 64/378 (16%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
E VIE M G+ PN + ++ + + GL E L M G + Y ++
Sbjct: 155 VEMVIE-MHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVV 213
Query: 300 GYVKLGNLESASRTILLCLGGG--------NMEQSDFSKETYCE----VVKGFLQNGNVK 347
Y K+GN+ A + + + L G + S FS + Y + + G
Sbjct: 214 MYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEP 273
Query: 348 GLANLIIEAQKLEPSGIV------VDRSVGFG----------IISACVNLGLSDKAHSI- 390
L N + L G + ++ VG G +I G ++KA +
Sbjct: 274 NLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLF 333
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L + + + Y + YC+E + A L+ + GL + Y LI+
Sbjct: 334 LKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCK 393
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP------- 503
+ +F+ A+ L M +Y I+ GL + R + L++ ++
Sbjct: 394 AGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFT 453
Query: 504 ---------------------------RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
++ H + ++I FC+ R+++++ +
Sbjct: 454 YNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAV 513
Query: 537 FLQFEPNDQTYLSLINGY 554
+ P ++TY S+I GY
Sbjct: 514 RIGIIPTNKTYTSMICGY 531
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 15/251 (5%)
Query: 331 ETYCEV----VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
E CEV V+ F + G +K ++IE + G+V + II +GL +
Sbjct: 132 EKACEVMRCMVESFSEVGRLKEAVEMVIE---MHNQGLVPNTRTLNWIIKVTSEMGLVEY 188
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + +EM G Y + YCK EA + + + G +D + +I
Sbjct: 189 AELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIIS 248
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF--LDEVV-EDP 503
A FR + + + ++ ++ GL + R + AF L+E+V +
Sbjct: 249 RFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCK--RGSIKQAFEMLEEMVGKGW 306
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ-FEPNDQTYLSLINGYVTAEQYFS 562
+ V TH S+I CK G E A R +++ + +PN TY ++I+GY ++
Sbjct: 307 KPNVYTH--TSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNR 364
Query: 563 VLMMWHEIKRK 573
M+ +K +
Sbjct: 365 AEMLLSRMKEQ 375
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 117/340 (34%), Gaps = 47/340 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN+Y + ++G C + ++ + +PN ++ + Y + +
Sbjct: 307 KPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAE 366
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
L S M E G Y++LI G+ K GN E A + L M FS TY
Sbjct: 367 MLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNL------MSSEGFSPNLCTYN 420
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+V G + G V+ EA K+ G GL +
Sbjct: 421 AIVNGLCKRGRVQ-------EAYKMLEDGF---------------QNGLKPDKFT----- 453
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
Y + +CK+ +A L + G+Q D+ +Y LI
Sbjct: 454 -----------YNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRM 502
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
+ + F + I +Y +++ G L F + D + + +
Sbjct: 503 KESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHR-LSDHGCAPDSITYGA 561
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
II CK + ++A+ MI P + T ++L Y
Sbjct: 562 IISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEY 601
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 176/415 (42%), Gaps = 46/415 (11%)
Query: 217 KPNIYACNAALEGCCYG--LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+PN + G C Q D +++E S +PN + + + G+ +
Sbjct: 175 EPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGST---KPNTCIYSIVIDAFCKDGMLDG 231
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
L + M + + YS+LI KL E+ RT+ L + N+ + T+
Sbjct: 232 ATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENV-RTLFLEMIHLNIYPNVC---TFN 287
Query: 335 EVVKGFLQNGNVKG---LANLIIEAQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSI 390
V+ G + G V+ + +IE + ++P I + + G+G+ G D+A I
Sbjct: 288 SVIDGLCKEGKVEDAEEIMRYMIE-KGVDPDVITYNMIIDGYGL------RGQVDRAREI 340
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
D M + Y + Y ++ + EA Q+ +IS GL+ + + L+
Sbjct: 341 FDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFE 400
Query: 451 SQDFQSAFSLFRDMREA-RIYDLKGSYLTIMTGLMENHR-PELMAAF--LDEVVEDPRVE 506
+SA + F +M A I DL ++ T++ G +N E M+ F L+ ED ++
Sbjct: 401 LGRTKSAQNFFDEMLSAGHIPDLY-THCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQ 459
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+ + ++I CK G+L+ A T ++ + P+ TY ++I+GY +L
Sbjct: 460 I----YTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE----GLLDE 511
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
++ RK+ +G L D Y ++ GF + K EMK F+++
Sbjct: 512 AKDMLRKMEDNGC--------LADNRTYNVIVRGFLRS-----NKVSEMKAFLEE 553
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 25/290 (8%)
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDK 386
F++ + +++G VK +L +KL I V +G +++ G + K
Sbjct: 140 FNQVIFNTLLRGLFAENKVKDAVHLF---KKLVRENICEPNEVMYGTVMNGLCKKGHTQK 196
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A +L M +Y + A+CK+ AT L+ ++ + D+ Y LI+
Sbjct: 197 AFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLID 256
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DP 503
A +++ +LF +M IY ++ +++ GL + + E + ++E DP
Sbjct: 257 ALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDP 316
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
V +N II + G+++ A+ MI EPN +Y LINGY ++
Sbjct: 317 DVIT----YNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEA 372
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG-------FFDAVM 606
+ + EI QKG+K + L+ L + G FFD ++
Sbjct: 373 MQVCREI-------SQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEML 415
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 145/339 (42%), Gaps = 20/339 (5%)
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
+K + +M E G Y+ L++ K GN+ A + + ME++ + T
Sbjct: 2 KKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLV------EKMEENGYPTNT 55
Query: 333 --YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
Y +V+G +GN+ L+ KL G+V + ++ A ++A +
Sbjct: 56 VTYNSLVRGLCMHGNLNQSLQLL---DKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKL 112
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
LDE+ A G L Y L CKE RT EA + D+ S G +V +Y+ ++ +
Sbjct: 113 LDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCH 172
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
++ A L +M +Y ++ L + R E LDE+V +
Sbjct: 173 EGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVR-ASFKPSAT 231
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY--LSLINGYVTAEQYFSVLMMWH 568
+N II CK G+L+ + L +MI + PN+ T+ ++++ + FS++
Sbjct: 232 TYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIAVLCKQGRVPEAFSIIQNLG 291
Query: 569 EIKRKISTDGQKGIKF----EHNLVDAF--LYALVKGGF 601
+R + D KG+ + N AF LY + K GF
Sbjct: 292 NKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGF 330
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 147/351 (41%), Gaps = 28/351 (7%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN + + LE Y + V++A K+++ + G +PN S+ L +G E+ +
Sbjct: 88 PNEFTYSFLLEAA-YKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAIR 146
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ GF+ +V Y+ ++ G E A++ L + E+ S TY ++
Sbjct: 147 FFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQL----LAEMDSEERSPSLVTYNILI 202
Query: 338 KGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+G ++ ++ E + +PS + II+ G D LD+M
Sbjct: 203 GSLAFHGRIEHAFEVLDEMVRASFKPSATTYN-----PIIAHLCKEGKLDLVIKCLDQMI 257
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
C+ G + + CK+ R EA ++ ++ + Y +I + +
Sbjct: 258 HHRCNPNEGTF-NAIAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTY 316
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW--- 512
AF L +M + +Y +++ GL + LDE +E R+ ++ +D+
Sbjct: 317 PAFQLLYEMTKFGFVPDPYTYSSLIRGL-------CIEGMLDEALEIFRL-LEENDYRPI 368
Query: 513 ----NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
N++I FCK+GR + + L M+ + PN+ TY ++ G E+
Sbjct: 369 LDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEE 419
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 143/331 (43%), Gaps = 54/331 (16%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKI 275
PN+Y N + C G + A + + M GV N ++ L + G+ +E++
Sbjct: 265 PNLYTYNCLMNEYC-GEGKICRAFDLFDEMRERGVEANVVTYNTL-----IGGMCREERV 318
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
E E L+++ S ++ Y++LI G+ +GNL+ AS ++L L + S T
Sbjct: 319 WEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKAS-SLLDQLKSNGLSPSLV---T 374
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y +++G+ + GN KG+A+L A+++E GI + +I A V L +KA I
Sbjct: 375 YNILIEGYSKAGNWKGVADL---AREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYS 431
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M G + VY + C + E+++L + ++ Y+ +I
Sbjct: 432 SMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKED 491
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ A L R+M EA+ GL+ N +
Sbjct: 492 NSYRALRLLREM-EAK-------------GLVPN----------------------VASY 515
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+SII CK G+ E+A+ L +MI LQ +P+
Sbjct: 516 SSIIGVLCKDGKWEEAEVLLDKMIELQLKPS 546
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 172/431 (39%), Gaps = 59/431 (13%)
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWG-GFLVDICRKNSNFVAFLKVFEEC 204
++LLGS+ +N A+ + K R + F+++ G ++ C +N N ++
Sbjct: 132 NSLLGSLVRSNCFEKAWLFFNEL-KER--VKFDVYSFGIMIKGCCENGNLDKSFQL---- 184
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
+ L +++ + PN+ ++GCC + A + M +G+ N+ +F L
Sbjct: 185 --LGLLQDMG-LSPNVVIYTTLIDGCCKN-GDIERARLFFDKMGEMGLVANQYTFTVLIN 240
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
KGL++ +L M G + Y+ L++ Y G + A M
Sbjct: 241 GLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLF------DEMR 294
Query: 325 QSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ TY ++ G + V L+ + +K S ++ + +I ++G
Sbjct: 295 ERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNT---LIGGFCDVG 351
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
DKA S+LD++ + G S L Y ++ Y K L ++ G+
Sbjct: 352 NLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCT 411
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
LI+A + Q+ + AF ++ M + GL+
Sbjct: 412 VLIDAYVRLQEMEKAFQIYSSMEK--------------FGLV------------------ 439
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
P V V + +IH C G ++++ + R M + EP+D Y ++I+GY + +
Sbjct: 440 PDVYV----YGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYR 495
Query: 563 VLMMWHEIKRK 573
L + E++ K
Sbjct: 496 ALRLLREMEAK 506
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 140/364 (38%), Gaps = 62/364 (17%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN++ +E CC + A+ + M LG+ N+ + + + KG ++
Sbjct: 138 VSPNVFIYTILIEACCRN-GDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDG 196
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE---- 331
EL M G + Y+SLI+ Y + G L A + + SK
Sbjct: 197 FELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVF-----------DEISKRGVAC 245
Query: 332 ---TYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDK 386
TY ++ G + G V L+ ++ + P+ R+ + C N G DK
Sbjct: 246 NAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPT----TRTFNMLMDGLC-NTGQLDK 300
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A S L+++ G L Y + + K ++ ++LV ++ G+ Y L+
Sbjct: 301 ALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMN 360
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ S D + A+ +F M+ RI GL+ +
Sbjct: 361 TFVRSDDIEKAYEMFHLMK--RI------------GLVPDQ------------------- 387
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
H + +IH C G + +A + + M+ + +PND Y ++INGY + L
Sbjct: 388 ---HTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKF 444
Query: 567 WHEI 570
E+
Sbjct: 445 LEEM 448
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 117/295 (39%), Gaps = 59/295 (20%)
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAA-----LEGCCYGL 234
+ + + CR +AF KVF+E + + ACNA + G C
Sbjct: 215 YNSLITEYCRDGKLSLAF-KVFDEISKRGV------------ACNAVTYNILIGGLCRKG 261
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
Q VS AE ++E M + P +F L G +K + + G +V Y
Sbjct: 262 Q-VSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTY 320
Query: 295 SSLISGYVKLGNLE--------------SASRTILLCLGGGNMEQSDFSK---------- 330
+ LISG+ K+GN S S+ L + D K
Sbjct: 321 NILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKR 380
Query: 331 -------ETYCEVVKGFLQNGNVKGLANL---IIEAQKLEPSGIVVDRSVGFGIISACVN 380
TY ++ G GN+ + L ++E L+P+ ++ + + G C
Sbjct: 381 IGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMH-LQPNDVIYNTMIN-GYCKECN- 437
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
S KA L+EM G + + Y+ T++ CK+ ++ EA +L+ +++ +GL+
Sbjct: 438 ---SYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLK 489
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 108/286 (37%), Gaps = 41/286 (14%)
Query: 323 MEQSDFSKETYCEVVKGFLQNGNV-KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
+ ++ F ++ +K F +NGNV KG L ++E G+ + + +I AC
Sbjct: 100 LGRTQFDVYSFGITIKAFCENGNVSKGFELL----AQMETMGVSPNVFIYTILIEACCRN 155
Query: 382 GLSDKAHSILDEMNACGCSVGLGVY----------------------------VPTL--- 410
G D+A + M+ G + +Y +P L
Sbjct: 156 GDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTY 215
Query: 411 ----KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
YC++ + + A ++ +IS G+ + Y+ LI A L M+
Sbjct: 216 NSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKR 275
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
A I ++ +M GL + + ++L+++ +N +I F K G
Sbjct: 276 AHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLV-TYNILISGFSKVGNSS 334
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+R M P+ TY L+N +V ++ M+H +KR
Sbjct: 335 VVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKR 380
>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Brachypodium distachyon]
Length = 968
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 187/465 (40%), Gaps = 52/465 (11%)
Query: 124 RAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGF 183
+A V+ +EKN D T + ++ + + A+ L+K M + P E
Sbjct: 276 KAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRM-RGDNLAPDECTYNT 334
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
L+ S + + +F E R L KP++ ++G C ++ +A +V
Sbjct: 335 LIKGFFDESKMMLAIHIFNEMLRQGL-------KPSLATYTTLIDGYCRN-GTIDEALRV 386
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+ M V GV+P+E ++ + L G + + M ++G S + Y +L+ G K
Sbjct: 387 LYEMQVAGVKPSEVTYSAM-----LNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCK 441
Query: 304 LGNLESASR------------------TILL--CLGGGNMEQSDFSKE-----------T 332
G+L A +LL C G E D ++ T
Sbjct: 442 GGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHT 501
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++ GF + G + +I Q + G+V D ++ + G A +
Sbjct: 502 YTILLSGFCRKGKI---VPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQ 558
Query: 393 EMNAC--GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
E+ C G Y + Y K + + + D++ + + + +Y+ L+ I
Sbjct: 559 EI-ICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIK 617
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ L++DM I +Y ++ GL ++ E+ FLD++V + +
Sbjct: 618 KGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEG-IYPDRL 676
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++ +I+AF + R+ DA + M +L P+ +TY ++ING +
Sbjct: 677 SFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLI 721
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 5/188 (2%)
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
S C+ L H I +M +C + Y L Y K+ R A ++ D+ +G++
Sbjct: 234 SMCIEGNLKGAKHMI-HKMKSCSLP-NVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVE 291
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
DV Y+ +I+ + A+ L + MR + + +Y T++ G + + L
Sbjct: 292 ADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHI 351
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+E++ ++ + ++I +C+ G +++A R L M +P++ TY +++NG V
Sbjct: 352 FNEMLRQG-LKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNGSV 410
Query: 556 TAEQYFSV 563
+ FSV
Sbjct: 411 --HEAFSV 416
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 88/469 (18%), Positives = 181/469 (38%), Gaps = 95/469 (20%)
Query: 190 KNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
K F A + V E D + ++ ++Y N ++ C ++ + A +++ M
Sbjct: 271 KKGRFKAAMCVLE-------DMEKNGVEADVYTYNIMIDKLC-KMKRSTHAYLLLKRMRG 322
Query: 250 LGVRPNESSFGFLAYLYALKGL--QEKIVELESLMNEF---GFSSQMVFYSSLISGYVKL 304
+ P+E ++ L +KG + K++ + NE G + Y++LI GY +
Sbjct: 323 DNLAPDECTYNTL-----IKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRN 377
Query: 305 GNLESASRTILLCLGGG------------------------NMEQSDFSKE--TYCEVVK 338
G ++ A R + G NME+ S + TY +++
Sbjct: 378 GTIDEALRVLYEMQVAGVKPSEVTYSAMLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLR 437
Query: 339 GFLQNGNV---KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
G + G++ K + I+ PS I D+ ++ N G D+A + ++M
Sbjct: 438 GLCKGGHLVQAKEFMSCIVHI----PSAI--DQKTLNALLLGICNHGSLDEALDLCEKMV 491
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ Y L +C++ + A L+ + GL D+ Y L++ I +
Sbjct: 492 TINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVK 551
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+A LF++ I +G Y + +NS+
Sbjct: 552 AASYLFQE-----IICKEGMYADCIA------------------------------YNSM 576
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
++ + KAG+L + T+ M + PN +Y L++G++ + ++ ++ R
Sbjct: 577 MNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVR--- 633
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KGIK + + L K G + ++ ++K ++ D+ +
Sbjct: 634 ----KGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSF 678
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 98/242 (40%), Gaps = 11/242 (4%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A K ++ M + G+ P+ SF L ++ K ++L + M S YS++I+
Sbjct: 659 AVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMIN 718
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFS-KET-YCEVVKGFLQNGNVKGLANLIIEAQ 357
G ++ L+ + + +M +S K T Y ++ + G++ G L E
Sbjct: 719 GLIRKNWLQHSCDVL------RDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMT 772
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
L GIV I+ G ++ + + G + + + CKE
Sbjct: 773 AL---GIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEA 829
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+ ++A L + S GL++DV Y+ LI Q A L+ +M+ + +Y
Sbjct: 830 KISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYT 889
Query: 478 TI 479
T+
Sbjct: 890 TL 891
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 109/531 (20%), Positives = 198/531 (37%), Gaps = 74/531 (13%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
DEA + + + PS+ ++++ N ++ AF SV +EK D T
Sbjct: 381 DEALRVLYEMQVAGVKPSEVTYSAML--------NGSVHEAF-SVYDNMEKYGCSPDVYT 431
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
LL + A + C+ + + L+ IC S
Sbjct: 432 YRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGS------------ 479
Query: 205 CRIALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
LDE LD + P+I+ L G C + V A +++ M G+ P+
Sbjct: 480 ----LDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVP-AVILLQMMLEKGLVPD- 533
Query: 257 SSFGFLAYLYALKGL-QEKIVELES-----LMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
+ Y LKGL +E V+ S ++ + G + + Y+S+++GY+K G L
Sbjct: 534 ----IVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKV 589
Query: 311 SRTILL--------------CLGGGNMEQSDFSKETYC--EVVKGFLQNGNV-------- 346
TI L G++++ S+ Y ++V+ ++ NV
Sbjct: 590 EMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILG 649
Query: 347 ---KGLANLIIE-AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
G+ + ++ K+ GI DR +I+A A + + M S
Sbjct: 650 LSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPS 709
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
Y + +++ + ++ D+ SGL+ +Y ALI A D AF L
Sbjct: 710 SKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKE 769
Query: 463 DMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKA 522
+M I + + +I+ GL + + E ++ V + +++H CK
Sbjct: 770 EMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPT-IATFTTLMHGLCKE 828
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++ DA M + + TY LI G + L ++ E+K K
Sbjct: 829 AKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSK 879
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 11/213 (5%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+SDA ++ M L + P+ ++ + K + ++ M E G + Y +
Sbjct: 691 MSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIA 750
Query: 297 LISGYVKLGNLESASRTI--LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLII 354
LI+ + G++ A R + LG E +D S +V+G + G V+ +I+
Sbjct: 751 LINAKCRFGDINGAFRLKEEMTALGIVPAEVADSS------IVRGLSKCGKVE--EGIIV 802
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
+ + + + C +SD H + M +CG + + Y + C
Sbjct: 803 FCSIIRAGMVPTIATFTTLMHGLCKEAKISDALH-LKSLMESCGLKIDVVTYNVLITGLC 861
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
K ++A +L ++ S GL+ +V Y L EA
Sbjct: 862 KIQCVSDALELYEEMKSKGLRPNVTTYTTLTEA 894
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 167/411 (40%), Gaps = 61/411 (14%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
+I + NA L+G C + D E++++ M + PN +F L GL E++ E+
Sbjct: 215 DIVSYNAVLKGLCMA-KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC--EV 336
+ M+E G + + Y+++I G K G+LE A+ + M C V
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL------NRMPSYGLKPNVVCYNTV 327
Query: 337 VKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGIISA--CVNLGLSDKAHSILDE 393
+KG K L+ E QK P +D V F I+ C N GL D+ +L++
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCP----LD-DVTFNILVDFFCQN-GLVDRVIELLEQ 381
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + GC + Y + +CKE EA L+ +SS G + + +Y +++ ++
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A L M I G N +N
Sbjct: 442 WVDAEELMSQM--------------IQQGCPPN----------------------PVTFN 465
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++I+ CK G +E A L++M+ P+ +Y ++I+G A + L + + +
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV-- 523
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KGI + + AL + G + V+Q+ + ++ + D Y
Sbjct: 524 -----NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 10/218 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN + L+G C + V DAE+++ M G PN +F L KGL E+ +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWV-DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
EL M G S ++ YS++I G K G E A + + + G + C +
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 337 VKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ +G N +I+ ++ + I D + +IS+ +D+A M
Sbjct: 542 SR--------EGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+ GC Y +K E EA +L+ ++ S G
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 167/411 (40%), Gaps = 61/411 (14%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
+I + NA L+G C + D E++++ M + PN +F L GL E++ E+
Sbjct: 215 DIVSYNAVLKGLCMA-KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC--EV 336
+ M+E G + + Y+++I G K G+LE A+ + M C V
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL------NRMPSYGLKPNVVCYNTV 327
Query: 337 VKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGIISA--CVNLGLSDKAHSILDE 393
+KG K L+ E QK P +D V F I+ C N GL D+ +L++
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCP----LD-DVTFNILVDFFCQN-GLVDRVIELLEQ 381
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + GC + Y + +CKE EA L+ +SS G + + +Y +++ ++
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A L M I G N +N
Sbjct: 442 WVDAEELMSQM--------------IQQGCPPN----------------------PVTFN 465
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++I+ CK G +E A L++M+ P+ +Y ++I+G A + L + + +
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV-- 523
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KGI + + AL + G + V+Q+ + ++ + D Y
Sbjct: 524 -----NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 10/218 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN + L+G C + V DAE+++ M G PN +F L KGL E+ +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWV-DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
EL M G S ++ YS++I G K G E A + + + G + C +
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 337 VKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ +G N +I+ ++ + I D + +IS+ +D+A M
Sbjct: 542 SR--------EGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+ GC Y +K E EA +L+ ++ S G
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 117/539 (21%), Positives = 202/539 (37%), Gaps = 84/539 (15%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
DE+ KS N P P T S + L S R F S+ + + + K ++
Sbjct: 135 DESPKS--HFVINRPAPHVPATRSELFPLVS--------RVFKSLSWSVARKKKFGNWVE 184
Query: 145 VHTLLGSMRNANTAAPAFAL------VKCMFKN-------RYFMPFELWGGFL---VDIC 188
H S+ AFAL V + ++ + FEL+ FL +
Sbjct: 185 CHGFSHSISCFRIIVHAFALAGMRLEVWALLRDIVGFCNEAKYDTFELFSAFLDSPQHVE 244
Query: 189 RKNSNFVAFLKVFEECCRIALDENLDF--------MKPNIYACNAALEGCCYGLQSVSDA 240
R F + VF L+ LD ++P+I CN L+ C V
Sbjct: 245 RSGVVFDVLISVFAS--NSMLENALDVFSNAKHVGLEPDIRTCNFLLK-CLVEANRVEFV 301
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALK-----GLQEKIVELESLMNEFGFSSQMVFYS 295
+V E + G PN ++ + Y G+++ V L + G +V YS
Sbjct: 302 RRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRS-GEKPTVVTYS 360
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
+ I G K+GN+E+A L+ + + + ++ +V+ GF + G V ++
Sbjct: 361 TYIHGLCKVGNVEAA----LMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVL-- 414
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
++++ SGI+ D +I+A G K +++EM + Y + CK
Sbjct: 415 -EEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCK 473
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
++ A + I +S + D Y+ LI+ D SA L +M + S
Sbjct: 474 KNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFS 533
Query: 476 YLTIMTG-----------------LMENHRPELMAA--FLD---------------EVVE 501
+++ G L + P+ +A LD E +
Sbjct: 534 CRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQ 593
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+ + H +N+II+ CK G E A L RM+ P+ Y +LI+G+ +
Sbjct: 594 EHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNF 652
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 12/275 (4%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + P+ ACN L+G C +A ++E G N S+ + Y +G E
Sbjct: 560 DGIWPDTIACNYILDGSCRA-GYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPE 618
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ +EL M + +V YS+LISG+ K N + A + G F+ TY
Sbjct: 619 RALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVG----ITFNIATY 674
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR-SVGFGIISACVNLGLSDKAHSILD 392
++ F + + + ++++ G+ +D+ S I+ C N + KA ++ +
Sbjct: 675 TILMSIFSHSHKMHEAYGIF---KEMKERGLCLDQISYTTLIVGFCNNREMK-KAWALFE 730
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM+ GCS + Y + +CK +R AT + ++ + DV Y LI+
Sbjct: 731 EMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHG 790
Query: 453 DFQSAFSLFRDMREARIY--DLKGSYLTIMTGLME 485
F A L+ M++ + D+ + L + G ++
Sbjct: 791 YFDQAHKLYDVMKDKGVLPDDITHNVLGLKAGTVQ 825
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 148/406 (36%), Gaps = 79/406 (19%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N ++ N + G C V +A +V+E M G+ P+ S+ L + KG K ++L
Sbjct: 390 NSHSFNDVIYGFC-KRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDL 448
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M +V Y+SLI G K L++A I +G + + + Y ++
Sbjct: 449 MEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAV-DIFHSIGASSCK---YDSTVYETLID 504
Query: 339 GFLQNGN--------------------------VKGLANLIIEAQKLE------PSGIVV 366
GF G+ ++G L + Q LE GI
Sbjct: 505 GFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWP 564
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL- 425
D I+ G +A ++L++ G ++ Y + CKE A +L
Sbjct: 565 DTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELL 624
Query: 426 -----------VMDISS-----------------------SGLQLDVGNYDALIEASITS 451
V++ S+ G+ ++ Y L+ S
Sbjct: 625 PRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHS 684
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVK 508
A+ +F++M+E + + SY T++ G N + A +E+ + P V
Sbjct: 685 HKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITY 744
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
T II FCK+ R++ A +M P+ TY LI+ Y
Sbjct: 745 T----CIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWY 786
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 196/492 (39%), Gaps = 24/492 (4%)
Query: 81 TNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLL 140
N D AWK F L A L P S+I L + FA +E +
Sbjct: 262 AGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQ----MEAERSVP 317
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
+T++ +A A+ L++ + R +P + ++ K L +
Sbjct: 318 CAYAYNTMIMGYGSAGRFEDAYKLLE-RLRERGCIPSVVSFNSILTCLGKKRKVDEALSL 376
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
FE + A +PN N ++ C G V +A ++++ M + PN +
Sbjct: 377 FEVMKKDA--------EPNSSTYNIIIDMLCLG-GRVEEAYRILDEMEHASLFPNLLTVN 427
Query: 261 FLA-YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
+ L + L+E ES ++ G + V Y SLI G K G ++ A R L
Sbjct: 428 IMVDRLCKARKLEEAYKIFES-ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLD 486
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
G+ + + Y +++ F +G + + ++L G D ++ +
Sbjct: 487 AGH----NANPVVYTSLIRNFFIHGRKEDGHKIF---KELIRRGCKPDLTLLNTYMDCVF 539
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
G +K I +++ + G + Y + K + E + + + G LD
Sbjct: 540 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 599
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y+A+++ S A+ + +M+E + +Y I+ GL + R + A L E
Sbjct: 600 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD-EAYMLFEE 658
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ +E+ ++S+I F K GR+++A L M+ PN T+ SL++ V AE+
Sbjct: 659 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 718
Query: 560 YFSVLMMWHEIK 571
L+ + +K
Sbjct: 719 INEALVCFQSMK 730
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 152/402 (37%), Gaps = 58/402 (14%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNR-YFMPFELWGGFLVDICRKNSNFVAFLKVFE 202
V ++L S+RN + AAP F L + + +P + + L + + + A KV E
Sbjct: 77 VVISVLRSIRNPSLAAPFFLLASSSSASAPHPLPADAYHAVLPFL---HHDLAALEKVLE 133
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
E +A+ L + PN AC A L + + DA + M L RP S++ L
Sbjct: 134 E---MAV---LGYGLPN-QAC-AHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVL 185
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
A E+ +EL M E G+ + +++L+ + G + A +
Sbjct: 186 IGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALV-------- 237
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG-FGIISACVNL 381
+ VKG LEP ++ + + FG
Sbjct: 238 ------------DEVKG-----------------SCLEPDIVLYNVCIDCFG------KA 262
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G D A E+ A G Y + CK R EA +L + + Y
Sbjct: 263 GNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAY 322
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ +I ++ F+ A+ L +RE S+ +I+T L + + + + + + +
Sbjct: 323 NTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK 382
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
D E + +N II C GR+E+A R L M PN
Sbjct: 383 D--AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPN 422
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 112/287 (39%), Gaps = 19/287 (6%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
K+F+E R KP++ N ++ C + V + E + G P+ S
Sbjct: 514 KIFKELIRRGC-------KPDLTLLNTYMD-CVFKAGEVEKGRMIFEDIRSYGFLPDVRS 565
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ L + G + + M + GF+ Y++++ G+ K G + A +
Sbjct: 566 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL---- 621
Query: 319 GGGNMEQS--DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
M++ + TY +V G + + L EA+ GI ++ + +I
Sbjct: 622 --EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS---KGIELNVVLYSSLID 676
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
+G D+A+ IL+EM G + + + L A K EA +
Sbjct: 677 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPP 736
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+ Y LI Q + AF ++DM++ + +Y T+++GL
Sbjct: 737 NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL 783
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 141/322 (43%), Gaps = 13/322 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQ-SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+KP++ L G Y + ++S+ ++ M GV PN F + YA K + E+
Sbjct: 297 IKPDVAIYAILLHG--YATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEE 354
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+ + + M + G S +V + +LI KLG ++ A + G + + F +
Sbjct: 355 AMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEG-VTPNIF---VFS 410
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+V G G + L E GI VD ++ N G +A ++D M
Sbjct: 411 SLVYGLCTVGKWEKAEELFFEVLD---QGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLM 467
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + Y + +C R EA +L+ + S+GL+ + Y L+ ++
Sbjct: 468 IRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRV 527
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWN 513
A+SLFR+M + + +Y TI+ GL + R E +L+ + + R + + +N
Sbjct: 528 DDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMI--NSRTKCDIYTYN 585
Query: 514 SIIHAFCKAGRLEDAKRTLRRM 535
I++ CK +++A + RR+
Sbjct: 586 IILNGLCKNNFVDEAFKMFRRL 607
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 127/339 (37%), Gaps = 44/339 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ ++G C Q V A+ V + M GV+P+ ++ L + Y G +++
Sbjct: 192 IPPNVVTYTTVIDGLCKA-QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEV 250
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V++ M+ G + Y+ L+ LC G E F +
Sbjct: 251 VQMLEEMSTHGLEPDCITYALLLD---------------YLCKNGRCREARLFFDSMF-- 293
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
GI D ++ ++ G + HS LD M
Sbjct: 294 -------------------------RKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMV 328
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G S ++ AY K+ EA + + GL DV ++ ALI+A
Sbjct: 329 GNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVD 388
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A F M + + +++ GL + E EV+ D + V +N++
Sbjct: 389 DAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVL-DQGICVDAVFFNTL 447
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ C GR+ +A+R + MI + PN +Y +L+ G+
Sbjct: 448 MCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGH 486
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 112/305 (36%), Gaps = 45/305 (14%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M+EFG +V Y+++I+G+ + G +E A L + G TY V+ G
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNV----VTYTTVIDGLC 207
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
+ V + Q++ G+ D +I ++ G + +L+EM+ G
Sbjct: 208 KAQVVDRAKGVF---QQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEP 264
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
Y L CK R EA + G++ DV Y L+ T + A S
Sbjct: 265 DCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYAT----KGALSEM 320
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN-------- 513
S+L +M G + + + +E H +N
Sbjct: 321 H------------SFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLS 368
Query: 514 -------SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA-------EQ 559
++I A CK GR++DA +MI PN + SL+ G T E
Sbjct: 369 PDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEEL 428
Query: 560 YFSVL 564
+F VL
Sbjct: 429 FFEVL 433
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 84/213 (39%), Gaps = 38/213 (17%)
Query: 360 EPSGIVVDRSVGFGIISAC-VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
E S V + + I+ C +G + + + G V + V LK C R
Sbjct: 81 ECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKR 140
Query: 419 TAEATQ-LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
EAT L++ +S G DV Y+ +I + A++LF +M + I +Y
Sbjct: 141 VDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYT 200
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
T++ GL CKA ++ AK ++MI
Sbjct: 201 TVIDGL------------------------------------CKAQVVDRAKGVFQQMID 224
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+P++ TY LI+GY++ ++ V+ M E+
Sbjct: 225 RGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM 257
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 76/173 (43%), Gaps = 2/173 (1%)
Query: 385 DKAHSILD-EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
D+A IL M+ GC + Y + + +E + +A L +++ G+ +V Y
Sbjct: 142 DEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTT 201
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
+I+ +Q A +F+ M + + G+Y ++ G + + + + L+E +
Sbjct: 202 VIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEE-MSTH 260
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+E + ++ CK GR +A+ M +P+ Y L++GY T
Sbjct: 261 GLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYAT 313
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 140/338 (41%), Gaps = 15/338 (4%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
NI+ N L CC V AEKV+ M + V P+ ++ L LY KG+ + + +
Sbjct: 205 NIHVYNVLLHACCKS-GDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSV 263
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
+ M G S + Y+SLI G+ + G + A + +++ + TY ++
Sbjct: 264 QDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLF------RDIKDVTPNHVTYTSLID 317
Query: 339 GFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
G+ + ++ L ++ + L P+ I + I+ G A+ +L+EM+
Sbjct: 318 GYCRVNDLDEALRLKEVMSEKGLYPTVITYN-----SILRKLCEGGRLRDANILLNEMSE 372
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
+ AYCK A ++ + +GL+LD Y ALI +++
Sbjct: 373 RKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDK 432
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A L M +A +Y ++ + E + DE+V + V + ++I
Sbjct: 433 AKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRG-LCVDVSVYRALI 491
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
FCK +++ A+R L M + Y SL GY
Sbjct: 492 RRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGY 529
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 19/260 (7%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+K+ G+V + V ++ AC G +KA +L EM L Y + YCK+
Sbjct: 195 KKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKK 254
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
EA + + +G+ D+ Y++LI + A LFRD+++ + +Y
Sbjct: 255 GMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIKDVTPNHV--TY 312
Query: 477 LTIMTGLME-NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
+++ G N E A L EV+ + + +NSI+ C+ GRL DA L M
Sbjct: 313 TSLIDGYCRVNDLDE--ALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEM 370
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYA 595
+ EP++ T +LIN Y S L ++K K+ G K +D F Y
Sbjct: 371 SERKIEPDNVTCNTLINAYCKIGDMRSAL----KVKDKMVGAGLK--------LDQFTYK 418
Query: 596 LVKGGFFDAVMQVVEKSQEM 615
+ GF A + ++K++E+
Sbjct: 419 ALIHGFCKA--KEIDKAKEL 436
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 134/369 (36%), Gaps = 78/369 (21%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+A +V E M V G RP+ + L A L + + ++ M + G + + Y+ L+
Sbjct: 154 EAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLL 213
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
K G++E A + + +
Sbjct: 214 HACCKSGDVEKAEKVL------------------------------------------SE 231
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+E + D +IS G+ +A S+ D M G S + Y + +C+E R
Sbjct: 232 MELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGR 291
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
EA QL DI + + Y +LI+ D A L M E +Y +Y +
Sbjct: 292 MREAVQLFRDIKD--VTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNS 349
Query: 479 IMTGLMENHRPELMAAFLDEVVE---------------------DPRVEVKTHD------ 511
I+ L E R L+E+ E D R +K D
Sbjct: 350 ILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAG 409
Query: 512 -------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+ ++IH FCKA ++ AK L M+ F P+ TY L++ Y + +V+
Sbjct: 410 LKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVI 469
Query: 565 MMWHEIKRK 573
+ E+ R+
Sbjct: 470 KLPDELVRR 478
>gi|30699392|ref|NP_178029.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806390|sp|A3KPF8.1|PP131_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g79080, chloroplastic; Flags: Precursor
gi|126352286|gb|ABO09888.1| At1g79080 [Arabidopsis thaliana]
gi|332198080|gb|AEE36201.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 576
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 137/332 (41%), Gaps = 44/332 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN+ L C + A +VIE M G+ P+ S++ +L +G +
Sbjct: 103 KPNVAHSTQLLYDLCKA-NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAM 161
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+L M + G+ S V Y++L+ G LG+L + +
Sbjct: 162 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQS-----------------------LQF 198
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V+ +Q G L P+ + F + +A G +D+A +LDE+
Sbjct: 199 VERLMQKG--------------LAPNAF----TYSFLLEAAYKERG-TDEAVKLLDEIIV 239
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G L Y L +CKE RT +A L ++ + G + +V +Y+ L+ ++
Sbjct: 240 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 299
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDWNSI 515
A SL +M +Y ++ L + R E L E+ + + + V +N +
Sbjct: 300 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 359
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
I CK G+++ + L MI+ + +PN+ TY
Sbjct: 360 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY 391
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 147/372 (39%), Gaps = 17/372 (4%)
Query: 192 SNFVAFLKVFEECCRI-ALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEK 242
SN V + + C + +L+++L F++ PN + + LE Y + +A K
Sbjct: 174 SNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAA-YKERGTDEAVK 232
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+++ + V G PN S+ L + +G + + L + GF + +V Y+ L+
Sbjct: 233 LLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLC 292
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
G E A+ ++L + GG+ S TY ++ +G + ++ E K
Sbjct: 293 CDGRWEEAN-SLLAEMDGGDRAPSVV---TYNILINSLAFHGRTEQALQVLKEMSKGNHQ 348
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH-RTAE 421
V S I C G D LDEM C G Y + + C+ + + E
Sbjct: 349 FRVTATSYNPVIARLCKE-GKVDLVVKCLDEMIYRRCKPNEGTY-NAIGSLCEHNSKVQE 406
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A ++ +S+ Y ++I + + +AF L +M +Y ++
Sbjct: 407 AFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIR 466
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
GL L + E + ++N++I CK R + A M+ +
Sbjct: 467 GLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRM 526
Query: 542 PNDQTYLSLING 553
PN+ TY L+ G
Sbjct: 527 PNETTYAILVEG 538
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 143/354 (40%), Gaps = 60/354 (16%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN +A L+G C L + AE V++ M V PN +F + YA KG+ K
Sbjct: 111 LAPNCVTYSALLDGYC-KLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 169
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V++ M + + Y+ LI GY K G + A DF KE
Sbjct: 170 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVA---------------DDFCKE---- 210
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+++++LE S ++ D +++ +G D+A S++ +M
Sbjct: 211 ------------------MKSRRLEESNVIFDI-----LLNNLKRVGRMDEARSLIIDMY 247
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ G + Y + Y KE A +V ++ ++ DV Y+ALI+ + +
Sbjct: 248 SKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD 307
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+ R I GL + + E L+E ++ + +N +
Sbjct: 308 PRYVCSR---------------MIELGLAPDCKTEDALDILNE-MKSYGIMPNAVTYNIL 351
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
I CK G +E A+ L M+ ++F P T+ L+ Y +E+ +L + HE
Sbjct: 352 IGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQI-HE 404
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 176/413 (42%), Gaps = 46/413 (11%)
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
L+D K N +A L + +E ++N+ F ++ A NA ++G D V
Sbjct: 261 LIDGYFKEGNQLAALSIVQE----MKEKNIRF---DVVAYNALIKGLLR--LGKYDPRYV 311
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
M LG+ P+ + E +++ + M +G V Y+ LI G K
Sbjct: 312 CSRMIELGLAPDCKT--------------EDALDILNEMKSYGIMPNAVTYNILIGGLCK 357
Query: 304 LGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
G +E A + M +F + T+ +VK + ++ + + +KL
Sbjct: 358 TGAVEKAESAL------DEMLVMEFVPTPITHKFLVKAYSRSEKADKILQI---HEKLVA 408
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
SG+ + +V +I+ LG++ KA +LDEM G S L Y ++ YC +
Sbjct: 409 SGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEK 468
Query: 422 ATQLVMDISSSGLQLDVGNYDALI----EASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
A + + G+ ++ Y+ L+ A + + + L +M E + +Y
Sbjct: 469 ALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYD 528
Query: 478 TIMTGLME-NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+++G +R + + ++ + + +KT +N +I + K+G++ +A+ L ++
Sbjct: 529 ILVSGYGRVGNRKKTIILHIEMITKGFVPTLKT--YNVLISDYAKSGKMIEARELLNDLL 586
Query: 537 FLQFEPNDQTYLSLINGYVT----AEQYFSVLMMWH-EIKRKISTDGQKGIKF 584
PN TY L G++ E S+ + E+K+ + G+KG+KF
Sbjct: 587 TKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGLKF 639
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/329 (18%), Positives = 134/329 (40%), Gaps = 29/329 (8%)
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
+MN G +V SS++ G+ + G L A+ G D + +Y ++
Sbjct: 2 IMN--GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMG----LDPNHVSYATIINSL 55
Query: 341 LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV------NLGLSDKAHSILDEM 394
++G V +EA L+ +V R + F I++ +G + +A + + +
Sbjct: 56 FKSGRV-------MEAFNLQSQMVV--RGISFDIVTCTTVMDGLFKVGKTKEAEEVFETI 106
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ Y L YCK + A ++ + + +V + ++I
Sbjct: 107 LKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGML 166
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A + R+M + + Y ++ G + ++ F E+ + R+E ++
Sbjct: 167 SKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEM-KSRRLEESNVIFDI 225
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+++ + GR+++A+ + M +P+ Y SLI+GY + L + E+K
Sbjct: 226 LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMK--- 282
Query: 575 STDGQKGIKFEHNLVDAFLYALVKGGFFD 603
+K I+F+ +A + L++ G +D
Sbjct: 283 ----EKNIRFDVVAYNALIKGLLRLGKYD 307
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 147/352 (41%), Gaps = 21/352 (5%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + P++ NA + G C + V A +++ M +PN +F L G
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVP-AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-- 331
K V L M + G S +V Y+ LI G + G++ +A + + +M D +
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL------SSMNCFDIEPDCL 477
Query: 332 TYCEVVKGFLQNGNVK-GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
T+ ++ F + G A L + +K GI +D G +I +G + A I
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRK----GISLDEVTGTTLIDGVCKVGKTRDALFI 533
Query: 391 LD---EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
L+ +M L V + L CK E ++ I+ GL V Y L++
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCK---VKEELAMLGKINKLGLVPSVVTYTTLVDG 590
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
I S D +F + M+ + Y I+ GL + R E L ++D V
Sbjct: 591 LIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL-SAMQDSGVSP 649
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ ++ + G+L+ A T+R M+ +E ND+ Y SL+ G+V +++
Sbjct: 650 NHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 1/181 (0%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I A + GL DKA ++ DEM GC + Y + C++ + EA + +
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ V Y+ALI AF L M + ++ +M GL +P
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
L ++ D + +N +I C+ G + A + L M EP+ T+ ++IN
Sbjct: 427 HLLKRML-DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 554 Y 554
+
Sbjct: 486 F 486
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 23/297 (7%)
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
GFLAY+ + M GF M+ Y ++++ K G E+A + L
Sbjct: 175 LGFLAYVTYRR------------MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI-ISA 377
G + S ++ GF + N++ A + + E + SV + I I
Sbjct: 223 KIGFVLDSHIGTS----LLLGFCRGLNLRD-ALKVFDVMSKEVT--CAPNSVSYSILIHG 275
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
+G ++A + D+M GC Y +KA C +A L ++ G + +
Sbjct: 276 LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPN 335
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-L 496
V Y LI+ + A + R M + RI+ +Y ++ G ++ R ++ AF L
Sbjct: 336 VHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR--VVPAFEL 393
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
V+E + +N ++ C+ G+ A L+RM+ P+ +Y LI+G
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 124/320 (38%), Gaps = 22/320 (6%)
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVK--LGNLESASRTILLCLGGGNMEQSDF--SKETYC 334
+ L FGF YSSL+ K LG L + ME F Y
Sbjct: 148 DELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYR--------RMEADGFVVGMIDYR 199
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA-CVNLGLSDKAHSILDE 393
+V +NG + + + K+ G V+D +G ++ C L L D A + D
Sbjct: 200 TIVNALCKNGYTEAAEMFMSKILKI---GFVLDSHIGTSLLLGFCRGLNLRD-ALKVFDV 255
Query: 394 MNA-CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M+ C+ Y + C+ R EA L + G Q Y LI+A
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
AF+LF +M +Y ++ GL + + E ++V+D R+ +
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD-RIFPSVITY 374
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
N++I+ +CK GR+ A L M +PN +T+ L+ G + + + H +KR
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV---HLLKR 431
Query: 573 KISTDGQKGIKFEHNLVDAF 592
+ I + L+D
Sbjct: 432 MLDNGLSPDIVSYNVLIDGL 451
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 56/255 (21%)
Query: 213 LDFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
L+ MK PN+Y + G C V +AEK++ M GV PN ++ + Y
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQ-FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
G ++ +E M E G+ YSSL+ G+V L G N E+S
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV------------LSQKGIDNSEEST 710
Query: 328 FS----KETYCEVVKGFLQ-----NGNVKGLANLIIE--------------AQKLEPSGI 364
S +ET E + + G + GL ++ Q + G+
Sbjct: 711 VSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGV 770
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC-------KEH 417
+++++ + S C S K H+ E+ G +VP+ K++C KE
Sbjct: 771 FLEKAMDIIMESYC-----SKKKHTKCMELITLVLKSG---FVPSFKSFCLVIQGLKKEG 822
Query: 418 RTAEATQLVMDISSS 432
A +LVM++ +S
Sbjct: 823 DAERARELVMELLTS 837
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 138/336 (41%), Gaps = 16/336 (4%)
Query: 226 ALEGCCYG-------LQSVSDA-EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
L CCY Q DA +++ M GV P ++ L + G K+
Sbjct: 180 GLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEA 239
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ M + + FYS++I+ Y + GN+ AS C+G G + ++ TY ++
Sbjct: 240 VYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHG----VEPNERTYGALI 295
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
GF + G ++ L+ + Q G+ ++ V +I G+ +KA I M
Sbjct: 296 NGFCKIGQIEAAEMLLADMQL---RGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKM 352
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G + + Y C+ +R +A +L+ ++ G+ + +Y LI D A
Sbjct: 353 GIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEA 412
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
LFRDM +Y ++ G ++N F E +E + + + ++H
Sbjct: 413 RRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKE-MEKKGLVPDIYTYAGLVH 471
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
C G+++ A R M +PN Y +L++G
Sbjct: 472 GHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSG 507
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 155/387 (40%), Gaps = 71/387 (18%)
Query: 97 NSLFPS--KPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRN 154
NSL S + + +A L +N ++ + +++ + D V + M+
Sbjct: 187 NSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKR 246
Query: 155 ANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLD 214
N A + YF + + CR N +VF+EC ++
Sbjct: 247 KNVAG-----------DVYF-----YSAVINAYCR-GGNVRRASEVFDECVGHGVE---- 285
Query: 215 FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
PN A + G C + + AE ++ M + GV N+ F + Y G+ EK
Sbjct: 286 ---PNERTYGALINGFCK-IGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEK 341
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-----------------SRTILLC 317
+E++++M + G + Y++L G ++ +E A S T L+
Sbjct: 342 ALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLIS 401
Query: 318 LGG--GNM------------EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK----L 359
+ G+M + S S TY ++ G+++NG+++ EA++ +
Sbjct: 402 IHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIR-------EAERFKKEM 454
Query: 360 EPSGIVVDRSVGFGIISA-CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
E G+V D G++ CVN G D A + +EM G + Y + KE R
Sbjct: 455 EKKGLVPDIYTYAGLVHGHCVN-GKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGR 513
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALI 445
+ EA QL D+ ++GL D Y L+
Sbjct: 514 SEEAFQLYDDMLAAGLTPDDTLYSVLV 540
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 108/234 (46%), Gaps = 16/234 (6%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ +CK +A L+ ++ G+ L+ Y++L+++ ++ + L ++M +
Sbjct: 155 VDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGV 214
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
G+Y ++ GL + A DE+ + V + ++++I+A+C+ G + A
Sbjct: 215 EPTVGTYTILVDGLSRAGDISKVEAVYDEM-KRKNVAGDVYFYSAVINAYCRGGNVRRAS 273
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
+ EPN++TY +LING+ Q + M+ ++ ++ G I F + ++
Sbjct: 274 EVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADM--QLRGVGHNQIVF-NTMI 330
Query: 590 DAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY--------KQAFMENHKKL 635
D + + G + +++ ++M + +D + Y + ME+ KKL
Sbjct: 331 DGY----CRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKL 380
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 175/453 (38%), Gaps = 84/453 (18%)
Query: 209 LDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
++E LD +K P++ CN L G C + + A ++ M +G P S+
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKA-RKIDKAIELFLEMPSMGCEPTIVSYN 59
Query: 261 -FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
++ L ++ + E S+++ G ++ +++LI G+ K G + +
Sbjct: 60 TVISGLASIDKMDEAYKFFNSMIDN-GCEPDVIAFTTLIHGFCKAGQPQVGHMLL----- 113
Query: 320 GGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
N F + Y V+ G+ + G++
Sbjct: 114 --NQALKRFRPDVFLYTSVIHGYCKAGDL------------------------------- 140
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
D IL+EM A GC Y + CK R EA +L + SG D
Sbjct: 141 -------DTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGD 193
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM--------ENHRP 489
+ LIEA A L+R+M E R Y+ YL + L+ +
Sbjct: 194 YVTFMTLIEALSNHGKLDEACELYREMIE-RGYE---PYLEVQDSLIFALCKAGKVDEAN 249
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
E+ + + V RV +NS++ +CK GR++D + L +M+ P+ QTY
Sbjct: 250 EIYQTVVAKKVATSRVA-----YNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNI 304
Query: 550 LINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVK----GGFFDAV 605
L+ G+ A + L E+ + +S+ G K + + LY + FFD
Sbjct: 305 LVAGFSRANRLDDAL----ELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEA 360
Query: 606 MQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVA 638
+ V+ + +K D + +A E +KLK A
Sbjct: 361 LDVISYTTVIKGLADSKRIDEA-CELFEKLKTA 392
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 179/470 (38%), Gaps = 26/470 (5%)
Query: 82 NNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLD 141
N D+A + FK L++ P+ ++I L Q K F + VI
Sbjct: 313 NRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVIS------- 365
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
+ TV L + + A F +K + + + ++D K LK F
Sbjct: 366 YTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTA----VIDGLLKAGRIEDGLKNF 421
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
E D + P ++G C Q + DA KV E M G P+ ++
Sbjct: 422 E-------DMSGSSCVPTRTTYTVVIDGLCKA-QMLPDACKVFEQMVQKGCVPDTITYTT 473
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L ++ ++ +L +M G V Y S++ G+ KL + A I G
Sbjct: 474 LIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERG 533
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
E F + ++ +L G + ++ E + G D + +I +
Sbjct: 534 -CEPGLF---IFTSLLSYYLSKGRAEEAYQVLTE---MTARGCAPDVILYTSLIDLLFST 586
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G +A + D M GC+ Y ++ + K A +++ ++ SG+ D Y
Sbjct: 587 GRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAY 646
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
++L++ + + AF ++ M + I ++ +M GL ++ + + + E++E
Sbjct: 647 NSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLE 706
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
V + +I KAGR+ +A + MI P TY SLI
Sbjct: 707 KDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLI 756
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 145/378 (38%), Gaps = 55/378 (14%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P I + N + G + + +A K +M G P+ +F L + + G Q ++
Sbjct: 52 EPTIVSYNTVISGLA-SIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAG-QPQVG 109
Query: 277 ELESLMNEF--GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+ L+N+ F + Y+S+I GY K G+L++ + + L G + + Y
Sbjct: 110 HM--LLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDA----AAYF 163
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ + G V L +++ SG + D +I A N G D+A + EM
Sbjct: 164 VLIDPLCKLGRVDEAYELF---ERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREM 220
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS----------------------- 431
G L V + A CK + EA ++ + +
Sbjct: 221 IERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRV 280
Query: 432 -SGLQL-----------DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
GL+L D+ Y+ L+ + A LF+ + +Y TI
Sbjct: 281 DDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTI 340
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ GL + R E AF DE ++ + ++I + R+++A ++
Sbjct: 341 IQGLYDAQRMEEAKAFFDEALD-------VISYTTVIKGLADSKRIDEACELFEKLKTAG 393
Query: 540 FEPNDQTYLSLINGYVTA 557
PN Y ++I+G + A
Sbjct: 394 CSPNVVAYTAVIDGLLKA 411
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 153/379 (40%), Gaps = 25/379 (6%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P +Y + G C + + A + + M G +PN ++ L L + +
Sbjct: 197 QPTVYTYTTIINGLC-KIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEAL 255
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS----KET 332
++ S M S + Y+SLI G + AS +L + N+ + F+ +
Sbjct: 256 DIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEAS-ALLNEMTSLNIMPNIFTFNVLVDA 314
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
C+ K G K + + +E + S ++ S+ I+ +A + D
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIV----------EARKLFD 364
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M GC Y +K YCK R EA QL ++ GL D NY+ LI
Sbjct: 365 AMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLG 424
Query: 453 DFQSAFSLFRDMRE-ARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTH 510
+ A LF++M + DL +Y ++ G + L AF L V++ ++
Sbjct: 425 RLREAQDLFKNMHSNGNLPDLF-TYSMLLDGFCKEGY--LGKAFRLFRVMQSTYLKPDIA 481
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+N +I A CK G L+DA++ + PN Q Y ++IN +L E
Sbjct: 482 MYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKE----GLLDEALEA 537
Query: 571 KRKISTDGQKGIKFEHNLV 589
R + DG +F +N++
Sbjct: 538 FRNMEGDGCPPDEFSYNVI 556
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 18/246 (7%)
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
L+P + + +I+ +G +A D+ A GC + Y + CK
Sbjct: 161 LQPDAVTFNT-----LINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGE 215
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
T A L + +G Q +V Y+ LI++ + A +F M+ RI +Y +
Sbjct: 216 TTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNS 275
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ GL R + +A L+E+ + +N ++ A CK G++ +A+ + M +
Sbjct: 276 LIQGLCNFRRWKEASALLNEMTS-LNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEM 334
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVK 598
EP+ TY SL+ GY S+ M E ++ KG K DAF Y ++
Sbjct: 335 GVEPDVVTYSSLMYGY-------SLRMEIVEARKLFDAMITKGCK-----PDAFSYNILI 382
Query: 599 GGFFDA 604
G+ A
Sbjct: 383 KGYCKA 388
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 107/289 (37%), Gaps = 72/289 (24%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL--------- 268
PNI+ N ++ C VS+A+ V +TM+ +GV P+ ++ L Y Y+L
Sbjct: 303 PNIFTFNVLVDAICKE-GKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARK 361
Query: 269 -------KGLQ----------------EKIVELESLMNEF---GFSSQMVFYSSLISGYV 302
KG + ++I E + L NE G + V Y++LI G
Sbjct: 362 LFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLC 421
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLE 360
+LG L A GN+ TY ++ GF + G + L ++++ L+
Sbjct: 422 QLGRLREAQDLFKNMHSNGNLP----DLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLK 477
Query: 361 PS----GIVVDRSVGFG--------------------------IISACVNLGLSDKAHSI 390
P I++D FG II+ GL D+A
Sbjct: 478 PDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEA 537
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
M GC Y ++ + + + A QL+ ++ G + G
Sbjct: 538 FRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAG 586
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 148/349 (42%), Gaps = 64/349 (18%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P + N ++G C + + DA + + M G+RPN
Sbjct: 47 LEPGVLIYNTIIDGLCK-YKHMDDALNLFKEMETKGIRPN-------------------- 85
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+V YSSLIS G ASR + +M + + + T+
Sbjct: 86 ---------------VVTYSSLISCLCNYGRWSDASRLL------SDMIERKINPDVFTF 124
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA-------CVNLGLSDK 386
++ F++ G ++EA+KL +V RS+ I++ C++ L D+
Sbjct: 125 SALIDAFVKEGK-------LVEAEKLYDE--MVKRSIDPSIVTYSSLINGFCMHDRL-DE 174
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + + M + C + Y +K +CK R E ++ ++S GL + Y+ LI+
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE-LMAAFLDEVVEDPRV 505
+ D A +F++M + +Y T++ GL +N + E M F E ++ ++
Sbjct: 235 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF--EYLQRSKM 292
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
E + +N +I CKAG++ED + +P+ Y ++I+G+
Sbjct: 293 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 341
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+++D M A GC L Y + CK T A L+ + L+ V Y+ +I+
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ A +LF++M I +Y ++++ L R + L +++E ++
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE-RKINPD 120
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT------AEQYFS 562
++++I AF K G+L +A++ M+ +P+ TY SLING+ A+Q F
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180
Query: 563 VLMMWH 568
++ H
Sbjct: 181 FMVSKH 186
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 123/319 (38%), Gaps = 16/319 (5%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+I+ M G +P+ ++G + +G + L + M + ++ Y+++I G
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIE--AQK 358
K +++ A ME TY ++ G + L+ + +K
Sbjct: 63 KYKHMDDALNLF------KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 116
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+ P D +I A V G +A + DEM + Y + +C R
Sbjct: 117 INP-----DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 171
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
EA Q+ + S DV Y+ LI+ + + +FR+M + + +Y
Sbjct: 172 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 231
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ GL + ++ E+V D V +N+++ CK G+LE A +
Sbjct: 232 LIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 290
Query: 539 QFEPNDQTYLSLINGYVTA 557
+ EP TY +I G A
Sbjct: 291 KMEPTIYTYNIMIEGMCKA 309
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 112/257 (43%), Gaps = 24/257 (9%)
Query: 365 VVDRSVGFG----------IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
++DR V G +++ G +D A ++L++M G+ +Y + C
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
K +A L ++ + G++ +V Y +LI + A L DM E +I
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
++ ++ ++ + DE+V+ DP + ++S+I+ FC RL++AK+
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT----YSSLINGFCMHDRLDEAKQM 178
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDA 591
M+ P+ TY +LI G+ ++ + E+ R++S G G +N++
Sbjct: 179 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM----EVFREMSQRGLVGNTVTYNIL-- 232
Query: 592 FLYALVKGGFFDAVMQV 608
+ L + G D ++
Sbjct: 233 -IQGLFQAGDCDMAQEI 248
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 108/284 (38%), Gaps = 55/284 (19%)
Query: 332 TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
TY VV G + G+ NL+ +E KLEP ++ + II D A +
Sbjct: 18 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT-----IIDGLCKYKHMDDALN 72
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ EM G + Y + C R ++A++L+ D+ + DV + ALI+A +
Sbjct: 73 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 132
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
A L+ +M + I +Y +++ G + R LDE + V
Sbjct: 133 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR-------LDEAKQMFEFMVSK 185
Query: 510 H------DWNSIIHAFCKAGRLEDAKRTLRRM-------------IFLQ----------- 539
H +N++I FCK R+E+ R M I +Q
Sbjct: 186 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 245
Query: 540 -----------FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
PN TY +L++G + ++++ ++R
Sbjct: 246 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 289
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 125/329 (37%), Gaps = 63/329 (19%)
Query: 216 MKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
++PN+ ++ + C YG SDA +++ M + P+ +F L + +G K
Sbjct: 82 IRPNVVTYSSLISCLCNYG--RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---K 136
Query: 275 IVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
+VE E L +E +V YSSLI+G+ L+ A + M + SK
Sbjct: 137 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ----------MFEFMVSKH 186
Query: 332 ------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
TY ++KGF + V+ + E + G V ++ +I G D
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI---LIQGLFQAGDCD 243
Query: 386 KAHSILDEMNACGCSVGLGVY----------------------------VPTLKAY---- 413
A I EM + G + Y PT+ Y
Sbjct: 244 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 303
Query: 414 ---CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
CK + + L ++S G++ DV Y+ +I + A +LF++M+E
Sbjct: 304 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 363
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEV 499
G Y T++ + + E A + E+
Sbjct: 364 PNSGCYNTLIRARLRDGDREASAELIKEM 392
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 17/237 (7%)
Query: 80 LTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL 139
+ + DEA + F+ + + FP N+LI KR + E + +
Sbjct: 168 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK------YKRVEEGMEVFREMSQRG 221
Query: 140 LDFQTV--HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAF 197
L TV + L+ + A A + K M + + L +C KN
Sbjct: 222 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC-KNGKLEKA 280
Query: 198 LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNES 257
+ VFE R M+P IY N +EG C V D + +S+ GV+P+
Sbjct: 281 MVVFEYLQRSK-------MEPTIYTYNIMIEGMCKA-GKVEDGWDLFCNLSLKGVKPDVV 332
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
++ + + KG +E+ L M E G Y++LI ++ G+ E+++ I
Sbjct: 333 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 389
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 151/376 (40%), Gaps = 44/376 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+I ++ L G C+G + +S+A +++ M +G +P+ +F L + L + V
Sbjct: 148 EPDIVTLSSLLNGYCHG-KRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV 206
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L M G + Y ++++G K G+++ A ++L + G +E + Y +
Sbjct: 207 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA-LSLLKKMEKGKIEANVV---IYNTI 262
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG--------LSD--- 385
+ G + ++ +L K+E GI D +IS N G LSD
Sbjct: 263 IDGLCKYKHMDDAFDLF---NKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIE 319
Query: 386 ------------------------KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
+A + DEM + Y + +C R E
Sbjct: 320 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 379
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A Q+ + S DV Y+ LI+ ++ + LFR+M + + +Y T++
Sbjct: 380 AQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 439
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
GL + ++ ++V D V ++ ++ CK G+LE A + + E
Sbjct: 440 GLFQAGDCDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 498
Query: 542 PNDQTYLSLINGYVTA 557
PN TY +I G A
Sbjct: 499 PNIYTYNIMIEGMCKA 514
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 179/451 (39%), Gaps = 61/451 (13%)
Query: 110 IAHLSSLQDNHNLKRAFASVVYVIEKNPKL---LDFQTVHTLLGSMRNANTAAPAFALVK 166
I LSSL + + + + V ++++ ++ D T +TL+ + N A+ A AL+
Sbjct: 151 IVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALID 210
Query: 167 CMFKNRYFMPFELWGGFLVDICRKNSNFVAF--LKVFEECCRIALDENLDFMKPNIYACN 224
M +G + +C++ +A LK E+ ++ N+ N
Sbjct: 211 RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK----------GKIEANVVIYN 260
Query: 225 AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE 284
++G C + + DA + M G++P+ ++ L G L S M E
Sbjct: 261 TIIDGLC-KYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIE 319
Query: 285 FGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS-DFSKETYCEVVKGFLQN 343
+ +V ++SLI + K G L A + L +++S D + TY ++ GF +
Sbjct: 320 RKINPNVVTFNSLIDAFAKEGKLIEAEK-----LFDEMIQRSIDPNIVTYNSLINGFCMH 374
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
+ D+A I M + C +
Sbjct: 375 DRL--------------------------------------DEAQQIFTLMVSKDCLPDV 396
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y +K +CK R E +L ++S GL + Y+ LI+ + D A +F+
Sbjct: 397 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 456
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M + +Y ++ GL + + E A + E ++ ++E + +N +I CKAG
Sbjct: 457 MVSDGVPPDIITYSILLDGLCKYGKLE-KALVVFEYLQKSKMEPNIYTYNIMIEGMCKAG 515
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++ED + +PN Y ++I+G+
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 546
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 152/373 (40%), Gaps = 27/373 (7%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
E M LG+ N ++ L + + + + M + G+ +V SSL++GY
Sbjct: 105 EQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 164
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKG-FLQNGNVKGLANLIIEAQKLEP 361
+ A + M + + +T + ++ G FL N + +A + ++
Sbjct: 165 KRISEAVALV------DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALI----DRMVA 214
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
G D +++ G D A S+L +M + +Y + CK +
Sbjct: 215 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDD 274
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A L + + G++ DV Y++LI + A L DM E +I ++ +++
Sbjct: 275 AFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLID 334
Query: 482 GLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+ + DE+++ DP + +NS+I+ FC RL++A++ M+
Sbjct: 335 AFAKEGKLIEAEKLFDEMIQRSIDPNIVT----YNSLINGFCMHDRLDEAQQIFTLMVSK 390
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVK 598
P+ TY +LI G+ A++ + ++ E+ Q+G+ + + L +
Sbjct: 391 DCLPDVVTYNTLIKGFCKAKRVEEGMELFREMS-------QRGLVGNTVTYNTLIQGLFQ 443
Query: 599 GGFFDAVMQVVEK 611
G D ++ +K
Sbjct: 444 AGDCDMAQKIFKK 456
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 183/482 (37%), Gaps = 42/482 (8%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
+EA + + + + P NS I+ L R F + E + T
Sbjct: 236 NEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVT 295
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
+ +L A LV+ M K F E + +L+ + R A
Sbjct: 296 FNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEA-------- 347
Query: 205 CRIALDENL-DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
R+ LDE + ++PN Y N ++G C +SDA +++ M GV P+ ++ L
Sbjct: 348 -RLVLDEMVAKGIEPNAYTYNIMMDGLCRN-HMLSDARGLMDLMMRNGVYPDTVAYSTLL 405
Query: 264 YLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
+ Y +G K+ E +S+++E G ++L+ K G A +
Sbjct: 406 HGYCSRG---KVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEML------ 456
Query: 321 GNMEQSDFSKETY-CE-VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
M + + +T C VV G +NG + + ++ E P+ + D+ F
Sbjct: 457 QKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSL--DKGNSFA----- 509
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
L + H N C Y + CK R EA + +++ + L+ D
Sbjct: 510 ---SLINSIH------NVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDS 560
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
YD I + SAF + +DM +Y ++ GL N++ + DE
Sbjct: 561 VTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDE 620
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+ E + +N+II C+ G+ +DA L M+ PN ++ LI + +
Sbjct: 621 MKEKG-ISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSS 679
Query: 559 QY 560
+
Sbjct: 680 DF 681
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 107/238 (44%), Gaps = 14/238 (5%)
Query: 346 VKGLANLIIEAQKLE-----PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
V+GL + Q LE S + +R V ++S ++++A +++ MN G
Sbjct: 192 VRGLCRAGLVKQALELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVL 251
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDI---SSSGL-QLDVGNYDALIEASITSQDFQS 456
+ + + A C+ + EA+++ D+ + GL + +V ++ +++
Sbjct: 252 PDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGD 311
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA--FLDEVVEDPRVEVKTHDWNS 514
A L M++ +D Y + GL+ N EL+ A LDE+V +E + +N
Sbjct: 312 ARGLVETMKKVGNFDSLECYNIWLMGLLRN--GELLEARLVLDEMVAKG-IEPNAYTYNI 368
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
++ C+ L DA+ + M+ P+ Y +L++GY + + F + HE+ R
Sbjct: 369 MMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIR 426
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 87/444 (19%), Positives = 153/444 (34%), Gaps = 92/444 (20%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P Y N + C ++ A ++ E M G PNE + G L GL ++ +E
Sbjct: 148 PQTYTFNLLIHSLCES-RAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALE 206
Query: 278 L-------------------------------ESL---MNEFGFSSQMVFYSSLISGYVK 303
L E L MNE G +V ++S IS +
Sbjct: 207 LVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCR 266
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK----- 358
G + ASR + + T+ ++KGF ++G + G A ++E K
Sbjct: 267 AGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHG-MMGDARGLVETMKKVGNF 325
Query: 359 ------------------LEPSGIVVDRSVGFGI-----------ISACVNLGLSDKAHS 389
L + +V+D V GI C N LSD A
Sbjct: 326 DSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSD-ARG 384
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
++D M G Y L YC + EA ++ ++ +G Q + + L+ +
Sbjct: 385 LMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLW 444
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
A + + M E + ++ GL N + + + E+ + +
Sbjct: 445 KEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDK 504
Query: 510 HD---------------------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
+ + ++I+ CK GRLE+AK+ M+ P+ TY
Sbjct: 505 GNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYD 564
Query: 549 SLINGYVTAEQYFSVLMMWHEIKR 572
+ I + + S + +++R
Sbjct: 565 TFIWSFCKQGKISSAFRVLKDMER 588
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 154/377 (40%), Gaps = 22/377 (5%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
KV+++ R+ + PNI+ N + CC V AE+++ M + P+ +
Sbjct: 183 KVYKKMVRVGV-------VPNIHIFNVLIHACCKS-GDVEKAEQLLNEMESRFIFPDLFT 234
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ L LY KG+ + + ++ M G S +V Y+SLI G+ + G + A R
Sbjct: 235 YNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLF---- 290
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIIS 376
+ + + TY ++ G+ + +++ L ++E + L P G+V S I+
Sbjct: 291 --REINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHP-GVVTYNS----ILR 343
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
G A+ +L+EM+ + AYCK A ++ + +GL+
Sbjct: 344 KLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKP 403
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
D + ALI + SA +M +A +Y ++ + E +
Sbjct: 404 DQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLP 463
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
DE+ + V + ++I CK ++E A+R M + + Y SL Y
Sbjct: 464 DELSRKG-LFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFK 522
Query: 557 AEQYFSVLMMWHEIKRK 573
A + + M E+ ++
Sbjct: 523 AGKAIAASDMLDEMDKR 539
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 21/267 (7%)
Query: 349 LANLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
L N++ + +K+ G+V + + +I AC G +KA +L+EM + L Y
Sbjct: 177 LTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYN 236
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ YCK+ EA + + G+ D+ Y++LI + A LFR++ A
Sbjct: 237 TLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGA 296
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+ +Y T++ G + E A L EV+E + +NSI+ C+ G+++D
Sbjct: 297 TPNHV--TYTTLIDGYCRVNDLE-EALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKD 353
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF--- 584
A R L M + EP++ T +LIN Y S + ++K+K+ G K +F
Sbjct: 354 ANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAM----KVKKKMLEAGLKPDQFTFK 409
Query: 585 ----------EHNLVDAFLYALVKGGF 601
E + FL+ ++ GF
Sbjct: 410 ALIHGFCKLHEVDSAKEFLFEMLDAGF 436
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 162/430 (37%), Gaps = 39/430 (9%)
Query: 52 NSPTQQQQQQTLTQDNITSLETNLHK-SLLTNN------TDEAWKSFKSLTANSLFPSKP 104
NS Q Q + + +LH ++L N+ T+ WK +K + + P+
Sbjct: 139 NSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIH 198
Query: 105 VTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFAL 164
+ N LI D +EK +LL+ + + NT +
Sbjct: 199 IFNVLIHACCKSGD--------------VEKAEQLLNEMESRFIFPDLFTYNTLISLYCK 244
Query: 165 VKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACN 224
++ GG DI NS F + + L ++ PN
Sbjct: 245 KGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATPNHVTYT 304
Query: 225 AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE--KIVELESLM 282
++G C + + +A ++ E M V G+ P G + Y L+ L E KI + L+
Sbjct: 305 TLIDGYCR-VNDLEEALRLREVMEVEGLHP-----GVVTYNSILRKLCEEGKIKDANRLL 358
Query: 283 NEFG---FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKG 339
NE V ++LI+ Y K+G++ SA + L G ++ F T+ ++ G
Sbjct: 359 NEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG-LKPDQF---TFKALIHG 414
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
F + V + E + +G S ++ + + + + DE++ G
Sbjct: 415 FCKLHEVDSAKEFLFE---MLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGL 471
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
V + VY ++ CK + A ++ + G++ D Y +L A + +A
Sbjct: 472 FVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASD 531
Query: 460 LFRDMREARI 469
+ +M + R+
Sbjct: 532 MLDEMDKRRL 541
>gi|357129487|ref|XP_003566393.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Brachypodium distachyon]
Length = 837
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 158/361 (43%), Gaps = 36/361 (9%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V A +++ M +LG+RP+E + L + +A + +K +E+ M +GF + + YS
Sbjct: 261 VDGAVELLGRMELLGMRPSEKTLSVLVHGFAKQLRLDKAMEMFDKMGSYGFVAGLPMYSV 320
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC--EVVKGFLQNGNVKGLANLII 354
LI G + + A + M++ + + + ++++ F + G+ +A L I
Sbjct: 321 LIEGLCQKKEIGKAVKLF------EEMKRGEVAPDARLLKKMLEAFCREGDF-AIAGLFI 373
Query: 355 --EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV----- 407
A++L+PSG++ +V ++ VN G ++ A+ +L M G + GV V
Sbjct: 374 NENARQLKPSGVIALFNV---VLEGFVNHGQAEAAYQLLTSMIRGGQGISDGVTVGAHVV 430
Query: 408 -------PTLKAY-------CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
P ++ CK + A L+ D++ G + + ++ LI +
Sbjct: 431 DISEDVKPNSDSFNIVVCGLCKVKKLDNALALIKDMTGIGCKGKLLMFNDLIHELCSLDR 490
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL-DEVVEDPRVEVKTHDW 512
+ +F M+ + + +Y ++ G+ P L D R +K +
Sbjct: 491 LDEGYKMFNLMKNLGLIPSEFTYNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIK--NC 548
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
++ C +GR+ +A + L M+ + F P+ TY + +NG + + L ++ +I
Sbjct: 549 TEMVQQLCISGRITEALQFLDEMLKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDISS 608
Query: 573 K 573
K
Sbjct: 609 K 609
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 7/163 (4%)
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C R EA Q + ++ G D+ Y A + + + +A +FRD+
Sbjct: 556 CISGRITEALQFLDEMLKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDISSKYYLPDV 615
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
++ ++ G + + ++E++E P + +N +I +CK+G +E A
Sbjct: 616 VAHNILINGFRISGKLSEAQEVMEEMLEKGLFPSIVT----YNLMIDVWCKSGNIEKAIA 671
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
L +MI + P TY SLI+G + + + +WH++ K
Sbjct: 672 CLNKMIDEEESPTVVTYTSLIDGLCSTGRPDEAIALWHKMMDK 714
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 180/434 (41%), Gaps = 31/434 (7%)
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLK 199
+D T + + ++ + +A + L+K M +N + P E+ L+ + K
Sbjct: 243 VDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVY-PNEITYNTLISGFVREGKIEVATK 301
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
VF+E +L + PN N + G C ++ +A ++++ M G+RPNE ++
Sbjct: 302 VFDE-------MSLFNLLPNSITYNTLIAGHC-TTGNIGEALRLMDVMVSHGLRPNEVTY 353
Query: 260 GFLA---YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
G L Y A G+ I+E M G + Y+++I G K G LE A + +
Sbjct: 354 GALLNGLYKNAEFGMVSSILER---MRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLL-- 408
Query: 317 CLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGF 372
+M + + + T+ ++ GF + G + ++ + K L P+GI+
Sbjct: 409 ----DDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYST---- 460
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
+I +G +A + MN G + +C+ + EA + +S
Sbjct: 461 -LIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRM 519
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GL + +D +I S D AFS+F M + +Y ++ GL
Sbjct: 520 GLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEA 579
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
F + P V +N+ + + C++G L DA + M+ F P++ TY +LI
Sbjct: 580 LKFFHRLRCIPNA-VDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIA 638
Query: 553 GYVTAEQYFSVLMM 566
G + + L++
Sbjct: 639 GLCKKGKIVAALLL 652
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 8/258 (3%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
GI D + +++A G A +L +M G Y L YCK+ R A
Sbjct: 170 GICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAA 229
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+QL+ ++S G+ +DV Y+ I+ + L + MR +Y + +Y T+++G
Sbjct: 230 SQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISG 289
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
+ + E+ DE + + + +N++I C G + +A R + M+ P
Sbjct: 290 FVREGKIEVATKVFDE-MSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRP 348
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFF 602
N+ TY +L+NG ++ V + ++ G++ H A + L K G
Sbjct: 349 NEVTYGALLNGLYKNAEFGMVSSILERMR-------MGGVRVSHISYTAMIDGLCKNGML 401
Query: 603 DAVMQVVEKSQEMKVFVD 620
+ +Q+++ ++ V D
Sbjct: 402 EEAVQLLDDMLKVSVNPD 419
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 119/263 (45%), Gaps = 8/263 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ ++ ++ + G C +S A K++ +++ G + +F L + + +K E
Sbjct: 769 PDKFSWHSLILGYCQS-KSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFE 827
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L MN+F + Y++L +G ++ + A R + + L G++ + + Y ++
Sbjct: 828 LVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVP----TNKQYITLI 883
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + GN+KG L E + L S V S I+ N + A +LD M
Sbjct: 884 NGMCRVGNIKGAMKLQDEMKTLGISSHNVAMS---AIVRGLANSKKIENAIWVLDLMLEM 940
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
+ + + YCKE A+A +L + ++LDV Y+ LI + D ++A
Sbjct: 941 QIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAA 1000
Query: 458 FSLFRDMREARIYDLKGSYLTIM 480
F L+ +M++ ++ Y+ ++
Sbjct: 1001 FKLYEEMKQRDLWPNTSIYIVLI 1023
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 144/372 (38%), Gaps = 37/372 (9%)
Query: 221 YACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELE 279
+ CN + C YG + +AE + MS +G+ PN +F + Y G K +
Sbjct: 491 FTCNVLVATFCRYG--KLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVF 548
Query: 280 SLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------------------SRTILLCLG 319
MN FG + Y L+ G G++ A ++ C
Sbjct: 549 DKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRS 608
Query: 320 G---------GNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR 368
G M +DF + TY ++ G + G + +A L++ + +E + +
Sbjct: 609 GNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKI--VAALLLSGKAIEKGLLSPNP 666
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+V ++ + G + A I +EM + + Y ++ +T++ ++
Sbjct: 667 AVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILST 726
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ S L ++ Y+ L+ F L++DM K S+ +++ G ++
Sbjct: 727 MKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKS 786
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
++ L + + V + +N +I FC+ ++ A +++M PN TY
Sbjct: 787 FDVAIKILRWITLEGHV-IDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYN 845
Query: 549 SLINGYVTAEQY 560
+L NG + +
Sbjct: 846 ALFNGLIRTSDF 857
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 27/270 (10%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLAN 351
Y++LI+G K G + +A L L G +E+ S Y +V G L++G+ +
Sbjct: 633 YTNLIAGLCKKGKIVAA-----LLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALY 687
Query: 352 LIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
+ E + +EP + + II G + K + IL M + L Y
Sbjct: 688 IFEEMLNKDVEPDTVAFNV-----IIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNIL 742
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR-EAR 468
L Y K H A L D+ G D ++ +LI S+ F A + R + E
Sbjct: 743 LHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGH 802
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAF-----LDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
+ D + ++ ++T E R E+ AF +++ + P V+ +N++ + +
Sbjct: 803 VID-RFTFNMLITKFCE--RNEMKKAFELVKQMNQFMVIPNVDT----YNALFNGLIRTS 855
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A R L+ ++ P ++ Y++LING
Sbjct: 856 DFHKAHRVLQVLLESGSVPTNKQYITLING 885
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 81/422 (19%), Positives = 168/422 (39%), Gaps = 59/422 (13%)
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVA 196
P +D +T L S + + A AL+ M N + + + +C+K A
Sbjct: 590 PNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAA 649
Query: 197 FLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
L + A+++ L + PN + ++G + + A + E M V P+
Sbjct: 650 LLLSGK-----AIEKGL--LSPNPAVYTSLVDGLLKHGHARA-ALYIFEEMLNKDVEPDT 701
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILL 316
+F + Y+ KG K+ ++ S M + Y+ L+ GY K + +R +L
Sbjct: 702 VAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAK---RHAMARCFML 758
Query: 317 CLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
+M + F K ++ ++ G+ Q+ + +A I+ LE G V+DR F +
Sbjct: 759 Y---KDMIRHGFLPDKFSWHSLILGYCQSKSFD-VAIKILRWITLE--GHVIDR-FTFNM 811
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
+ + +C+ + +A +LV ++ +
Sbjct: 812 L----------------------------------ITKFCERNEMKKAFELVKQMNQFMV 837
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+V Y+AL I + DF A + + + E+ Y+T++ G+ +
Sbjct: 838 IPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMK 897
Query: 495 FLDEVVEDPRVEVKTHD--WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
DE+ + + +H+ ++I+ + ++E+A L M+ +Q P T+ +L++
Sbjct: 898 LQDEM---KTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMH 954
Query: 553 GY 554
Y
Sbjct: 955 VY 956
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 189/465 (40%), Gaps = 70/465 (15%)
Query: 205 CRIAL-DENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
CR + DE L +K PN++ ++G + + V +A +V+ETM V P+
Sbjct: 263 CRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGF-FNAKKVDEAFRVLETMKARKVSPS 321
Query: 256 ESSF-----GFLAYLYALKGLQEKI--VELESLMNEFGFSSQMVFYSS---------LIS 299
E++ G + K + I +E E ++ + + SS L+
Sbjct: 322 EATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLK 381
Query: 300 GYVKLGN-LESASRTILL-CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
+ K+G+ +SA+ I + CL G F C ++ F++ G G + + +
Sbjct: 382 KFGKIGHKPDSATFNIAMNCLIKG------FDLNEVCNILDRFVEQGMKFGFSTYLALIK 435
Query: 358 KLEPSGIVVDRSVGFG----------------IISACVNLGLSDKAHSILDEMNACGCSV 401
L +G V + + F +I + DKA + EM G
Sbjct: 436 ALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPP 495
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
L + + YCK ++ L++ + G + D+ + ++I+ ++ + A F
Sbjct: 496 NLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCF 555
Query: 462 RDM------REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+M A Y++ L I+ + P M L ++ + +N++
Sbjct: 556 SEMVMWGLSPNAVTYNILIHSLCIIGDV-----PRSMK--LLRKMQTDGINPDVFSFNAL 608
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I +FC+ G++EDAK+ M+ L P++ TY++ I + + ++ E+ +
Sbjct: 609 IQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEA----KELFLSME 664
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
+G F N++ L ALVK F+A ++ + E + V+
Sbjct: 665 ANGCMPDSFTCNII---LDALVKQDQFEAAQKIAKTCSEWGILVN 706
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N +IH C++G +++A R +++M L + PN TY LI+G+ A++ + +K
Sbjct: 255 YNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMK 314
Query: 572 -RKISTDGQKGIKFEHNL 588
RK+S F H +
Sbjct: 315 ARKVSPSEATIRSFIHGV 332
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 157/390 (40%), Gaps = 24/390 (6%)
Query: 193 NFVAFLKVFEECCRIALDENLDFM--KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVL 250
N +A +K F+ I L ++L M ++Y CN + C Q A + M L
Sbjct: 80 NVIAKMKKFDVV--INLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYL-ASSFLGKMMKL 136
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G P+ +F L + L E+ + + + M E G +V Y+++I K G++ A
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 311 SRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVV 366
ME + Y +V G +G + +L+ + +K++P I
Sbjct: 197 LSLF------DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+ +I A V G A + +EM + + Y + +C E EA Q+
Sbjct: 251 N-----ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ + G DV Y +LI + A +F +M + + +Y T++ G +
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE---PN 543
+P + +V V +N ++H C G+++ A M + + PN
Sbjct: 366 GKPNVAQEVFSHMVSRG-VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
TY L++G + LM++ +++++
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/400 (19%), Positives = 150/400 (37%), Gaps = 51/400 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+I + + G C G + +A ++ M +G++P+ + + G +
Sbjct: 139 EPDIVTFTSLINGFCLG-NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS--------RTILLCLGGGNMEQSDF 328
L M +G +V Y+SL++G G A R I + N F
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 329 SKE-----------------------TYCEVVKGFLQNGNVKGLANLIIEAQKL----EP 361
KE TY ++ GF G V EA+++ E
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD-------EARQMFYLMET 310
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
G D +I+ D A I EM+ G + Y ++ + + +
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG---SYLT 478
A ++ + S G+ ++ Y+ L+ + + A +F DM++ + + +Y
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ GL N + E A + E + +++ + II CKAG++++A +
Sbjct: 431 LLHGLCYNGKLE-KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
+PN TY ++I+G H + RK+ DG
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEA----HVLFRKMKEDG 525
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 81/403 (20%), Positives = 161/403 (39%), Gaps = 19/403 (4%)
Query: 65 QDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKR 124
+ +I + + ++ L N +EA + + P + ++I SL N ++
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII---DSLCKNGHVNY 195
Query: 125 AFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFL 184
A S+ +E D +L+ + N+ A +L++ M K R P + L
Sbjct: 196 AL-SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK-RKIKPDVITFNAL 253
Query: 185 VDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVI 244
+D K F+ +++ E R+++ PNI+ + + G C V +A ++
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSI-------APNIFTYTSLINGFCME-GCVDEARQMF 305
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
M G P+ ++ L + + +++ M++ G + + Y++LI G+ ++
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
G A + G + TY ++ NG VK + + QK E G+
Sbjct: 366 GKPNVAQEVFSHMVSRG----VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421
Query: 365 VVDR-SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+ + + C N G +KA + ++M +G+ Y ++ CK + A
Sbjct: 422 APNIWTYNVLLHGLCYN-GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV 480
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
L + S G++ +V Y +I A LFR M+E
Sbjct: 481 NLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
NY ++ + S F A LF M E+R + ++ + + + +++ D +
Sbjct: 39 NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL 98
Query: 500 VEDPRVEVKTHDW---NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
++ +HD N +++ FC++ + A L +M+ L FEP+ T+ SLING+
Sbjct: 99 ----QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL 154
Query: 557 AEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMK 616
+ + M +++ + GIK + + + +L K G + + + ++ +
Sbjct: 155 GNRMEEAMSMVNQMV-------EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG 207
Query: 617 VFVDKWKY 624
+ D Y
Sbjct: 208 IRPDVVMY 215
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 138/324 (42%), Gaps = 16/324 (4%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA- 310
VRPN + + L +L M S +V YSSLISG+ +G L+ A
Sbjct: 194 VRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAV 253
Query: 311 ---SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
+R I N+ + + T+ ++ GF + G V+ N++ K + +D
Sbjct: 254 DLFNRMI-----SDNINPNVY---TFSILIDGFCKEGKVREAKNVLAVMMK---KNVKLD 302
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
++ + +KA S+ + M G + + Y + +CK EA +L
Sbjct: 303 VVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFE 362
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
++ + +V Y++L++ S A L +M + +Y +I+ + +N+
Sbjct: 363 EMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNN 422
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+ L ++ E ++ + +I+ CK GRL+DA++ ++ + PN TY
Sbjct: 423 HVDKAIVLLTKIKEKG-IQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTY 481
Query: 548 LSLINGYVTAEQYFSVLMMWHEIK 571
SLING+ + L M ++K
Sbjct: 482 TSLINGFCNKGFFDEGLAMLSKMK 505
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 118/290 (40%), Gaps = 14/290 (4%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + PN+Y + ++G C V +A+ V+ M V+ + ++ L Y L
Sbjct: 262 DNINPNVYTFSILIDGFCKE-GKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVN 320
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLGGGNMEQSDFSKE 331
K L ++M + G + + YS +I+G+ K+ ++ A + + C +Q +
Sbjct: 321 KAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHC------KQIFPNVV 374
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQ-KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY +V G ++G L+ E + +PS I+ S I+ A DKA +
Sbjct: 375 TYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNS----ILDAICKNNHVDKAIVL 430
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L ++ G + Y + CK R +A ++ D+ G ++ Y +LI
Sbjct: 431 LTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCN 490
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
F ++ M++ +Y ++ L E + L E++
Sbjct: 491 KGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMI 540
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 168/405 (41%), Gaps = 56/405 (13%)
Query: 209 LDENLDFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
LDE L + P + ACNA L+G + A ++ + M G+ P+ ++ L
Sbjct: 135 LDEALYVFRRLRTLPALPACNAVLDGLVKARRP-GCAWELFDEMLRRGLVPSVVTYNTLI 193
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+G K E+ M +V Y+++I + G + A R + + M
Sbjct: 194 NACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAER-LFDAMKEAGM 252
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ + + TY ++ G Q +V + ++ Q+L SG+
Sbjct: 253 QPNQY---TYNVLMSGHCQRDDVN---SAVVLYQELLKSGL------------------- 287
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
NA ++ + +CK R +EA + +++ G+ V Y++
Sbjct: 288 ---------NPNAV-------IFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNS 331
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
L++ + S + Q A +L+++M + + + ++ GL + + + FL V ED
Sbjct: 332 LMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQED- 390
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
V + +N++I +C+ G LE+A T RM + EPN +Y SLI+G+ +
Sbjct: 391 GVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIA 450
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQV 608
+ ++ E+ KGI+ A ++ K G DA ++
Sbjct: 451 MAIYTEMV-------AKGIEPNVVTYTALIHGHAKNGGIDAAFRL 488
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 99/523 (18%), Positives = 198/523 (37%), Gaps = 63/523 (12%)
Query: 130 VYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICR 189
+YV + L + +L + A A+ L M + R +P + L++ CR
Sbjct: 139 LYVFRRLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLR-RGLVPSVVTYNTLINACR 197
Query: 190 KNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
+V+++ +D N+ I C EGC + DAE++ + M
Sbjct: 198 FQGTVAKAQEVWDQMVAQQIDPNVVTYTTMI--CALCEEGC------IGDAERLFDAMKE 249
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G++PN+ ++ L + + V L + + G + V +++LI G+ K
Sbjct: 250 AGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSE 309
Query: 310 ASRTILLCLGGGNMEQSDF----SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV 365
A G +E F + Y ++ G ++GN + L E +L G+
Sbjct: 310 AK--------GMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRL---GLC 358
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
D ++ + G A L + G ++ Y + YC+ EA
Sbjct: 359 PDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALAT 418
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
++ G++ +V +Y +LI+ Q A +++ +M I +Y ++ G +
Sbjct: 419 CTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAK 478
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM---------- 535
N + E++E+ + + ++ C+ R+++A R +
Sbjct: 479 NGGIDAAFRLHKEMIEN-GISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHS 537
Query: 536 IFLQFE-------PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
+F F PN Y++LI G Q+ ++ +++ G+ +
Sbjct: 538 VFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRK-------SGM-----I 585
Query: 589 VDAFLYALVKGG------FFDAVMQVVEKSQEMKVFVDKWKYK 625
D+F Y L+ G +A+M + MK+ V +YK
Sbjct: 586 PDSFTYTLLIRGQCMLGYVLNAMMLYADM---MKIGVKPTRYK 625
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 114/527 (21%), Positives = 206/527 (39%), Gaps = 71/527 (13%)
Query: 73 TNLHKSLLTNNT-DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVY 131
T L K+ L N+ +A + K + + P NSLI LS + + A + +V
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK---RMDEARSFLVE 512
Query: 132 VIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKN 191
++E K F T + A+ A A VK M + L G + + C+K
Sbjct: 513 MVENGLKPNAF-TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKE 571
Query: 192 SNFVAFLKVFEECC--RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
KV E C R +D+ + Y L + V DAE++ M
Sbjct: 572 -------KVIEACSAYRSMVDQGI-LGDAKTYT---VLMNGLFKNDKVDDAEEIFREMRG 620
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G+ P+ S+G L ++ G +K + M E G + ++ Y+ L+ G+ + G +E
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 310 ASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRS 369
A L +++ + TYC ++ G+ ++G++ L E ++ G+V D
Sbjct: 681 AKEL----LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE---MKLKGLVPDSF 733
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV--- 426
V ++ C L ++A +I N GC+ + + K +T T+++
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRL 792
Query: 427 MDISSS--GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
MD S G DV Y+ +I+ + ++A LF M+ A + +Y +++ G
Sbjct: 793 MDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 485 ENHRPELMAAFLDEVVE---------------------------------------DPRV 505
+ R M DE + D
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++ +++ F K G +E A++ + M+ LQ+ P+ T + LIN
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 170/404 (42%), Gaps = 29/404 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KPN + A + G + S A+K ++ M GV PN+ L Y K EK+
Sbjct: 518 LKPNAFTYGAFISGYIEASEFAS-ADKYVKEMRECGVLPNKVLCTGLINEYCKK---EKV 573
Query: 276 VELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
+E S M + G Y+ L++G K ++ A I + G + FS
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE-IFREMRGKGIAPDVFS--- 629
Query: 333 YCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
Y ++ GF + GN++ +++ E + L P+ I+ + +G G + G +KA +
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG-GFCRS----GEIEKAKEL 684
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
LDEM+ G Y + YCK AEA +L ++ GL D Y L++
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEV 507
D + A ++F ++ + ++ + + + EL L+ +++ D +
Sbjct: 745 LNDVERAITIFGTNKKG-CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N +I CK G LE AK +M P TY SL+NGY + + ++
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
E GI+ +H + + A +K G + +V++
Sbjct: 864 DEAI-------AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 119/269 (44%), Gaps = 8/269 (2%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y LI G K+ LE A +++L+ + + TY ++ G L+ N L+
Sbjct: 280 YDVLIDGLCKIKRLEDA-KSLLVEMDSLGVS---LDNHTYSLLIDGLLKGRNADAAKGLV 335
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
E + GI + + I G+ +KA ++ D M A G Y ++ Y
Sbjct: 336 HE---MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C+E + +L++++ + + Y +++ +S D A+++ ++M +
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
Y T++ ++N R L E+ E + +NS+I KA R+++A+ L
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQG-IAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
M+ +PN TY + I+GY+ A ++ S
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFAS 540
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 134/356 (37%), Gaps = 50/356 (14%)
Query: 221 YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
Y ++G C + A +++ M G RPN + L + + +
Sbjct: 418 YTYGTVVKGMCSS-GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
M E G + + Y+SLI G K ++ A R+ L+ + ++ + F TY + G+
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEA-RSFLVEMVENGLKPNAF---TYGAFISGY 532
Query: 341 LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
IEA + A + EM CG
Sbjct: 533 -------------IEASEFA-------------------------SADKYVKEMRECGVL 554
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
+ + YCK+ + EA + G+ D Y L+ + A +
Sbjct: 555 PNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIH 517
FR+MR I SY ++ G + + ++ DE+VE+ P V + +N ++
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII----YNMLLG 670
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
FC++G +E AK L M PN TY ++I+GY + ++ E+K K
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
>gi|356523145|ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Glycine max]
Length = 529
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 143/338 (42%), Gaps = 49/338 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ +CN L+ C V A +V++ MS++G+ PN S+ + + KG E +
Sbjct: 184 PNVVSCNILLKALCKR-NEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDMESAMR 242
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCE 335
+ + + G+ + Y+ L+SG+ +LG L A R + L ME++ S+ TY
Sbjct: 243 VFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMMDL------MEENRVQPSEVTYGV 296
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+++ + + NL+ + + G+V + ++ G ++A + +
Sbjct: 297 MIEAYCKGRKPGEAVNLL---EDMVEKGLVPSSVLCCKVVDLLCEEGSVERACEVWRGVV 353
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G VG V + CKE + EA V+D +L+ G +L+
Sbjct: 354 RKGWRVGGAVVSTIVHWLCKEGKVVEARG-VLD------ELEKGEVASLM---------- 396
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
+Y T++ G+ E + DE+VE RV +N +
Sbjct: 397 -------------------TYNTLIAGMCERGQLCEAGRLWDEMVEKGRVP-NAFTYNVL 436
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ FCK G +++A R L M+ PN T+ L++G
Sbjct: 437 MKGFCKVGDVKEAIRVLEEMVESGCLPNKSTFSILVDG 474
>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Brachypodium distachyon]
Length = 684
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 174/433 (40%), Gaps = 61/433 (14%)
Query: 214 DFMKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
D +P+ + N + G C G+ + +A +++ M G+RPN ++ L + G
Sbjct: 205 DGCQPDCFTYNTLVHGVCQRGI--IDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRP 262
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG-GNMEQSDFSKE 331
E V + M E G S Y +L+ G + A + LG S +
Sbjct: 263 EDAVHVFDTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCM 322
Query: 332 TYCEVVKGFLQNGNVKGLANLIIE-AQKLEPSGIVVDRSVGFGIISACV--NLGLSDKAH 388
YC + +A ++E +K+ G ++D ++ FGI+ +C L LSD
Sbjct: 323 LYCL---------SKNEMAKEVVEVTKKMNSRGYLLDNAI-FGIVVSCAVKCLELSDLC- 371
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+LD+ G + G VY+ +K+ +++A + + GL V +Y+ +I+
Sbjct: 372 GLLDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCF 431
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ + A + ++MRE KG ++T
Sbjct: 432 VKAGAVDKAAEIIKEMRE------KGVLPNLVT--------------------------- 458
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+N++I + K G + +AK L+ ++ P+ T+ SLING Q ++
Sbjct: 459 ---FNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFN 515
Query: 569 EIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAF 628
E+ + G++ + + ++AL G + + ++ K ++ + D + +
Sbjct: 516 EM-------AEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPI 568
Query: 629 MENHKKLKVAKLR 641
+ + KV K R
Sbjct: 569 LSFCRMKKVDKAR 581
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 170/464 (36%), Gaps = 72/464 (15%)
Query: 204 CCRIALDENLDF--------MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
C R +DE L ++PN++ ++G C + DA V +TM GV PN
Sbjct: 222 CQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRP-EDAVHVFDTMKEKGVSPN 280
Query: 256 ESSFGFLAY---------------------------------LYALKG--LQEKIVELES 280
E+S+ L + LY L + +++VE+
Sbjct: 281 EASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTK 340
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK-------ETY 333
MN G+ + ++S VK LE + LL DF K + Y
Sbjct: 341 KMNSRGYLLDNAIFGIVVSCAVKC--LELSDLCGLL---------DDFVKKGGNPGFDVY 389
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
V+K L AN ++ L+ G++ + +I V G DKA I+ E
Sbjct: 390 IMVIKSLL-GCKSSSKANHYLKRMVLD--GLLSGVTSYNMVIDCFVKAGAVDKAAEIIKE 446
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G L + + Y K A ++ + GL D+ + +LI +
Sbjct: 447 MREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQ 506
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
AF F +M E + +Y +M L L+++ +D + + +N
Sbjct: 507 LDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKD-GITPDAYSFN 565
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ I +FC+ +++ A+ M+ L P++ TY SLI + EI
Sbjct: 566 APILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEA----KEILLL 621
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
+ + G +L + AL K G F Q++ K V
Sbjct: 622 MESSGSSATTHHTHL--PIVSALTKTGQFSKAGQLMNKYNRRNV 663
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 105/261 (40%), Gaps = 22/261 (8%)
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D SV + A G + + +++ E+ CGC V + + ++ + A ++
Sbjct: 105 DASVRRALEDALWRRGPAVLSAALVAEVRGCGCEVSEELLRALIASWGRLGLAQYAHEVF 164
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ + GL+ Y+ALI AS+ + +A+ F+ M +Y T++ G+ +
Sbjct: 165 VQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQR 224
Query: 487 HRPELMAAFLDEVV------EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
+DE + E + + ++ FC AGR EDA M
Sbjct: 225 -------GIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGV 277
Query: 541 EPNDQTYLSLING-YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKG 599
PN+ +Y +L++G + ++ + +M+ + R+ H+ LY L K
Sbjct: 278 SPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPP--------HHSAWQCMLYCLSKN 329
Query: 600 GFFDAVMQVVEKSQEMKVFVD 620
V++V +K +D
Sbjct: 330 EMAKEVVEVTKKMNSRGYLLD 350
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPS-GIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
E+++ + + GLA E P G+ +V +I A V G D A+ +
Sbjct: 142 ELLRALIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQ 201
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M A GC Y + C+ EA +LV + +G++ +V Y L++ +
Sbjct: 202 MPADGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGR 261
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+ A +F M+E + + SY T++ G
Sbjct: 262 PEDAVHVFDTMKEKGVSPNEASYRTLVHG 290
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 21/283 (7%)
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
CRI+ PN Y N L C + A +V+ M +G+ PN S+ L
Sbjct: 193 CRIS---------PNSYTFNLVLSALCKS-GKLEKAVEVLREMESVGITPNVVSYNTLIA 242
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
+ KGL +L++LM + G +V ++SLI G+ K G L A+R M+
Sbjct: 243 GHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFF------SEMK 296
Query: 325 QSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ + TY ++ G+ Q GN +A + E ++ +G+ D +I G
Sbjct: 297 VMNVTPNTVTYNTLINGYGQVGN-SNMAGKVYE--EMMRNGVKADILTYNALILGLCKEG 353
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+ KA ++ E++ Y + C + A QL + SG + +
Sbjct: 354 KTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFK 413
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
L A + ++DF+ AF++ DM + + L I GL +
Sbjct: 414 MLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQ 456
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 102/239 (42%), Gaps = 4/239 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++SA G +KA +L EM + G + + Y + +C + + AT+L + +G
Sbjct: 205 VLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNG 264
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
L+ +V +++LI A F +M+ + +Y T++ G + +
Sbjct: 265 LEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAG 324
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+E++ + V+ +N++I CK G+ + A ++ + PN TY +LI+G
Sbjct: 325 KVYEEMMRNG-VKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISG 383
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
+ ++ + R ++ K L AF+ G F+ +M + +S
Sbjct: 384 QCARKNSDRAFQLYKSMVRSGCHPNEQTFKM---LTSAFVKNEDFEGAFNVLMDMFARS 439
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 87/226 (38%), Gaps = 43/226 (19%)
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
+S+ ++ D A + EM C S + L A CK + +A +++ ++ S G+
Sbjct: 171 LSSLLDFHRVDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGI 230
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+V +Y+ LI GL+ +A
Sbjct: 231 TPNVVSYNTLIAGHCNK------------------------------GLLS------IAT 254
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
L ++ +E +NS+IH FCK G+L +A R M + PN TY +LINGY
Sbjct: 255 KLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGY 314
Query: 555 VTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
++ E+ R G+K + +A + L K G
Sbjct: 315 GQVGNSNMAGKVYEEMMR-------NGVKADILTYNALILGLCKEG 353
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 107/236 (45%), Gaps = 7/236 (2%)
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
G + QS F TY ++ + G++ +L + +++ G+ D +I
Sbjct: 245 GAGIAQSVF---TYNIMIGYMCKEGDMVTAKSLFHQMKQM---GLTPDIVTYNSLIDGYG 298
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
LGL D++ + +EM GC + Y + +CK + +A + ++ +SGL+ +V
Sbjct: 299 KLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVV 358
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y LI+A Q A DMR + + +Y +++ + DE+
Sbjct: 359 TYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEM 418
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++ +V + +++ CK GR+ +A+ R MI PN +TY +L++G++
Sbjct: 419 LQ-VQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHI 473
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/384 (19%), Positives = 151/384 (39%), Gaps = 50/384 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KPN+ + ++ C + A K + M +G+ PNE ++ L G
Sbjct: 353 LKPNVVTYSTLIDALCKE-HMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDA 411
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++L M + +V Y++L+ G K G + A + G + +TY
Sbjct: 412 LKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTP----NLKTYTA 467
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+V G ++N V+ N + ++++ I D + II + ++ ++ EM
Sbjct: 468 LVHGHIKNKRVE---NALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMK 524
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
ACG +Y + AY K +T EA L+ ++ G+++ + + LI+ +
Sbjct: 525 ACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVE 584
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A F M + ++L+ + + + T L
Sbjct: 585 EAIDYFARMAD---FNLQPNNVAVCTAL-------------------------------- 609
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I CK +E AK+ M P+ Y +LI+G + + + L I+ ++S
Sbjct: 610 IDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEAL----NIRSRMS 665
Query: 576 TDGQKGIKFEHNLVDAFLYALVKG 599
+ G++ + + + ++ L +G
Sbjct: 666 ---ELGMELDLHAYTSLVWGLSQG 686
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 82/415 (19%), Positives = 166/415 (40%), Gaps = 33/415 (7%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A+ + M +G+ P+ ++ L Y GL ++ L M + G ++ Y++LI+
Sbjct: 271 AKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALIN 330
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
+ K + A + M+ S TY ++ + ++ +++ +
Sbjct: 331 CFCKYEQMPKAFHFL------HEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMR 384
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
++ G+ + +I A G A + DEM + Y L CKE
Sbjct: 385 RV---GLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEG 441
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
R EA L + +G+ ++ Y AL+ I ++ ++A L ++++E +I Y
Sbjct: 442 RMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYG 501
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
TI+ GL ++ E + E ++ + + + + A+ K G+ +A L+ M
Sbjct: 502 TIIWGLCSQNKLEECEFVMSE-MKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCD 560
Query: 538 LQFEPNDQTYLSLINGYVT------AEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDA 591
L E T+ LI+G A YF+ + ++ ++ + A
Sbjct: 561 LGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVA------------VCTA 608
Query: 592 FLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMEN--HKKLKVA-KLRKR 643
+ L K + +A ++ ++ Q+ + DK Y N HK + A +R R
Sbjct: 609 LIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSR 663
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 138/337 (40%), Gaps = 44/337 (13%)
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
+ ++ + LD + PN + + ++ C +SDA K+ + M + V F
Sbjct: 372 MLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKA-GYLSDALKLADEMLQVQV-----GF 425
Query: 260 GFLAYLYALKGL--QEKIVELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
+ Y L GL + +++E E L M + G + + Y++L+ G++K +E+A +
Sbjct: 426 NVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELL 485
Query: 315 -----------LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP-- 361
LL G +K CE V ++ ++ AN +I +++
Sbjct: 486 KEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIR--ANSVIYTIRMDAYF 543
Query: 362 -SGIVV----------DRSVGFGIISACVNL------GLSDKAHSILDEMNACGCSVG-L 403
+G V D V I++ CV + GL ++A M +
Sbjct: 544 KTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNV 603
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
V + CK + A +L ++ + D Y ALI+ ++ +DFQ A ++
Sbjct: 604 AVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSR 663
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
M E + +Y +++ GL + + + FL+E++
Sbjct: 664 MSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMI 700
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 154/377 (40%), Gaps = 22/377 (5%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
KV+++ R+ + PNI+ N + CC V AE+++ M + P+ +
Sbjct: 183 KVYKKMVRVGV-------VPNIHIFNVLIHACCKS-GDVEKAEQLLNEMESRFIFPDLFT 234
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ L LY KG+ + + ++ M G S +V Y+SLI G+ + G + A R
Sbjct: 235 YNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLF---- 290
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIIS 376
+ + + TY ++ G+ + +++ L ++E + L P G+V S I+
Sbjct: 291 --REINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHP-GVVTYNS----ILR 343
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
G A+ +L+EM+ + AYCK A ++ + +GL+
Sbjct: 344 KLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKP 403
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
D + ALI + SA +M +A +Y ++ + E +
Sbjct: 404 DQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLP 463
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
DE+ + V + ++I CK ++E A+R M + + Y SL Y
Sbjct: 464 DELSRKG-LFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFK 522
Query: 557 AEQYFSVLMMWHEIKRK 573
A + + M E+ ++
Sbjct: 523 AGKAIAASDMLDEMDKR 539
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 21/267 (7%)
Query: 349 LANLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
L N++ + +K+ G+V + + +I AC G +KA +L+EM + L Y
Sbjct: 177 LTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYN 236
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ YCK+ EA + + G+ D+ Y++LI + A LFR++ A
Sbjct: 237 TLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGA 296
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+ +Y T++ G + E A L EV+E + +NSI+ C+ G+++D
Sbjct: 297 TPNHV--TYTTLIDGYCRVNDLE-EALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKD 353
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF--- 584
A R L M + EP++ T +LIN Y S + ++K+K+ G K +F
Sbjct: 354 ANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAM----KVKKKMLEAGLKPDQFTFK 409
Query: 585 ----------EHNLVDAFLYALVKGGF 601
E + FL+ ++ GF
Sbjct: 410 ALIHGFCKLHEVDSAKEFLFEMLDAGF 436
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 162/430 (37%), Gaps = 39/430 (9%)
Query: 52 NSPTQQQQQQTLTQDNITSLETNLHK-SLLTNN------TDEAWKSFKSLTANSLFPSKP 104
NS Q Q + + +LH ++L N+ T+ WK +K + + P+
Sbjct: 139 NSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIH 198
Query: 105 VTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFAL 164
+ N LI D +EK +LL+ + + NT +
Sbjct: 199 IFNVLIHACCKSGD--------------VEKAEQLLNEMESRFIFPDLFTYNTLISLYCK 244
Query: 165 VKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACN 224
++ GG DI NS F + + L ++ PN
Sbjct: 245 KGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATPNHVTYT 304
Query: 225 AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE--KIVELESLM 282
++G C + + +A ++ E M V G+ P G + Y L+ L E KI + L+
Sbjct: 305 TLIDGYCR-VNDLEEALRLREVMEVEGLHP-----GVVTYNSILRKLCEEGKIKDANRLL 358
Query: 283 NEFG---FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKG 339
NE V ++LI+ Y K+G++ SA + L G ++ F T+ ++ G
Sbjct: 359 NEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG-LKPDQF---TFKALIHG 414
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
F + V + E + +G S ++ + + + + DE++ G
Sbjct: 415 FCKLHEVDSAKEFLFE---MLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGL 471
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
V + VY ++ CK + A ++ + G++ D Y +L A + +A
Sbjct: 472 FVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASD 531
Query: 460 LFRDMREARI 469
+ +M + R+
Sbjct: 532 MLDEMDKRRL 541
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 183/441 (41%), Gaps = 64/441 (14%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA-----------YL 265
+P++ + + G C VS+A +I+ M G +P+E ++G + L
Sbjct: 172 RPDLVTVSTLINGLCLK-GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 266 YALKGLQEKIVELE---------------------SLMNEF---GFSSQMVFYSSLISGY 301
+ ++E+ ++ SL NE G + +V YSSLI G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV---KGLANLIIEAQK 358
G + ++ + +G + T+ ++ F++ G + K L N +I +
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDV----VTFSALIDVFVKEGKLLEAKELYNEMI-TRG 345
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+ P I + + C++ +A+ + D M + GC + Y + +YCK R
Sbjct: 346 IAPDTITYNSLIDGFCKENCLH-----EANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
+ +L +ISS GL + Y+ L+ S +A LF++M + +Y
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 479 IMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++ GL +N EL A + E ++ R+ + +N IIH C A +++DA +
Sbjct: 461 LLDGLCDNG--ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN-LVDAFLYAL 596
+P+ TY +I G M++ RK+ DG F +N L+ A L
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLF----RKMKEDGCTPDDFTYNILIRAHL--- 571
Query: 597 VKGGFFDAVMQVVEKSQEMKV 617
GG ++ VE +EMKV
Sbjct: 572 --GG--SGLISSVELIEEMKV 588
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 151/371 (40%), Gaps = 21/371 (5%)
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
LG P+ +F L + L+G + V L M E +V S+LI+G G +
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 310 ASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A I M + F + TY V+ ++GN +L + ++ VV
Sbjct: 194 ALVLI------DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
S+ +I + G D A S+ +EM G + Y + C + + + +++
Sbjct: 248 YSI---VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM-EN 486
++ + DV + ALI+ + A L+ +M I +Y +++ G EN
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
E F +++ E ++ +I+++CKA R++D R R + PN T
Sbjct: 365 CLHEANQMF--DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVM 606
Y +L+ G+ + + + ++ E+ +G+ L L G + +
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMV-------SRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 607 QVVEKSQEMKV 617
++ EK Q+ ++
Sbjct: 476 EIFEKMQKSRM 486
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 137/344 (39%), Gaps = 12/344 (3%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
VS+A +++ M + RP+ + L LKG + + L M E+GF V Y
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLII 354
+++ K GN SA L ME+ + Y V+ ++G+ +L
Sbjct: 216 VLNRLCKSGN--SALALDLF----RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
E +E GI D +I N G D +L EM + + + +
Sbjct: 270 E---MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 326
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
KE + EA +L ++ + G+ D Y++LI+ A +F M
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+Y ++ + R + E+ + T +N+++ FC++G+L AK +
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIP-NTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
M+ P+ TY L++G + L ++ ++++ T G
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 370 VGFGIISACVNLGLSD-------------------KAHSILDEMNACGCSVGLGVYVPTL 410
+GF +++ + LGL +A + D+M A GC + Y +
Sbjct: 144 LGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTII 203
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
CK TA A L+ + G Q DV Y LI++ + A +F M+ I
Sbjct: 204 NGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGIS 263
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
SY +++ GL R + +A L+E+ + ++ +I FCK G + +A+
Sbjct: 264 PTVVSYTSLIQGLCSFSRWKEASAMLNEMTS-LNIMPDIVTFSLLIDIFCKEGNVLEAQG 322
Query: 531 TLRRMIFLQFEPNDQTYLSLINGY------VTAEQYFSVLM 565
L+ M + EPN TY SL++GY V A + F V++
Sbjct: 323 VLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMI 363
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 159/398 (39%), Gaps = 56/398 (14%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++Y + G C + + A +I+ M +G +P+ ++ L L + +
Sbjct: 193 QPDVYTYTTIINGLC-KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEAL 251
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--------------------LL 316
++ S M G S +V Y+SLI G + AS + +
Sbjct: 252 DIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIF 311
Query: 317 CLGGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV 365
C G +E K TY ++ G+ L ++EA+KL ++
Sbjct: 312 CKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGY-------SLQMEVVEARKL--FDVM 362
Query: 366 VDRSVGFGIISACVNLG------LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
+ R + S + + D+A + +EM G + Y + A+C+ +
Sbjct: 363 ITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKL 422
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
EA +L D+ ++G D+ Y L+E AF LFR M+ + Y +
Sbjct: 423 REARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTIL 482
Query: 480 MTGLME----NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
+ + + NH +L + ++ P V++ + +II+ CK G L++A R+M
Sbjct: 483 IDSMCKSGNLNHARKLFSELFVHGLQ-PDVQI----YTTIINGLCKEGLLDEALEAFRKM 537
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
PN+ +Y +I G++ + + + E++ K
Sbjct: 538 EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDK 575
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 151/352 (42%), Gaps = 15/352 (4%)
Query: 207 IALDENLDF--MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
I+L + ++ + PN N + C +Q V V+ + LG++P +F L
Sbjct: 111 ISLSKQMELAGLSPNTCTLNILINCFCL-MQHVDLGFSVLAKVIKLGLQPTIITFTTLIN 169
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
G + +EL M G + Y+++I+G K+G E+A+ L+ G
Sbjct: 170 GLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMG--ETAAAAGLIKKMGEVGC 227
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLG 382
Q D TY ++ ++ V ++ ++A+ + P+ VV + +I +
Sbjct: 228 QPDVV--TYSTLIDSLCKDRLVNEALDIFSYMKAKGISPT--VVSYT---SLIQGLCSFS 280
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+A ++L+EM + + + + +CKE EA ++ ++ G++ +V Y+
Sbjct: 281 RWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYN 340
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
+L+ + A LF M SY ++ G R + +E++
Sbjct: 341 SLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQ 400
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ T + ++IHAFC+ G+L +A+ + M + P+ TY L+ G+
Sbjct: 401 G-LTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGF 451
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 14/227 (6%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP++++ + + G C ++ + +A+++ M G+ PN S+ L + + G +
Sbjct: 368 KPDVFSYSILINGYCM-VKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAR 426
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET---Y 333
EL M+ G+ + YS L+ G+ K G L A R Q + K Y
Sbjct: 427 ELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLF-------RAMQGTYLKPNLVMY 479
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ ++GN+ L E L G+ D + II+ GL D+A +
Sbjct: 480 TILIDSMCKSGNLNHARKLFSE---LFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRK 536
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
M GC Y ++ + + + A QL+ ++ G D G
Sbjct: 537 MEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583
>gi|15233137|ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183498|sp|Q9M316.1|PP292_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g61520, mitochondrial; Flags: Precursor
gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis thaliana]
gi|332646696|gb|AEE80217.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 125/286 (43%), Gaps = 13/286 (4%)
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGL 349
V Y+ LI GY + G LE+A + M++ + T +V G ++ GL
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVV------SRMKEDEIKPNVVTVNTIVGGMCRH---HGL 457
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
++ +E G+ + +I AC ++ +KA ++M GCS +Y
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ C+ R +A ++V + G LD+ Y+ LI + + + + DM +
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK 577
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+Y T+++ ++ E + ++++ ED ++ + ++I A+C G L++A
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDG-LDPTVTTYGAVIDAYCSVGELDEAL 636
Query: 530 RTLRRM-IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+ + M + + PN Y LIN + + L + E+K K+
Sbjct: 637 KLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/372 (20%), Positives = 150/372 (40%), Gaps = 14/372 (3%)
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAE 241
G L++ K+ L+VFE+ R ++ + +K + N ++G C + + +AE
Sbjct: 333 GILINTLCKSRRVDEALEVFEKM-RGKRTDDGNVIKADSIHFNTLIDGLC-KVGRLKEAE 390
Query: 242 KVIETMSVL-GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
+++ M + PN ++ L Y G E E+ S M E +V ++++ G
Sbjct: 391 ELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQK 358
+ L A + +ME+ TY ++ NV+ + +K
Sbjct: 451 MCRHHGLNMAVVFFM------DMEKEGVKGNVVTYMTLIHACCSVSNVE---KAMYWYEK 501
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+ +G D + + +IS + A +++++ G S+ L Y + +C ++
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
T + +++ D+ G + D Y+ LI +DF+S + MRE + +Y
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ + ++ +V T +N +I+AF K G A M
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 539 QFEPNDQTYLSL 550
PN +TY +L
Sbjct: 682 MVRPNVETYNAL 693
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD---LKGSYL---T 478
LV+ + ++ DV LI S+ A +F MR R D +K + T
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNT 375
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ GL + R + L + + R +N +I +C+AG+LE AK + RM
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 539 QFEPNDQTYLSLING 553
+ +PN T +++ G
Sbjct: 436 EIKPNVVTVNTIVGG 450
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 11/211 (5%)
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
++ Q + G+V D + + C G K +LDEM + G + +Y ++
Sbjct: 219 VDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDL 278
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C+E++ EA ++ + G+ ++ Y A+I+ + + + A+ L++++ A +
Sbjct: 279 CRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNV 338
Query: 474 GSYLTIMTGLMENHRPELMAA---FLDEVV--EDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
+ T++ G + EL+AA F+ V DP + V +N +IH CK+G + +A
Sbjct: 339 VVFGTLVDGFCKAR--ELVAARSLFVHMVKFGVDPNLYV----YNCLIHGQCKSGNMLEA 392
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
L M L P+ TY LING T E+
Sbjct: 393 MGLLSEMESLNLSPDVFTYTILINGLCTEER 423
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 16/334 (4%)
Query: 225 AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE 284
+ L CC+ S EK+++ M+ LGV+PN + + E+ ++ LM
Sbjct: 237 SVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKI 296
Query: 285 FGFSSQMVFYSSLISGYVKLGNLESA---SRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
G + YS++I GY K GNL A + IL+ N+ + +V GF
Sbjct: 297 HGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNV-------VVFGTLVDGFC 349
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
+ + +L + K G+ + V +I G +A +L EM + S
Sbjct: 350 KARELVAARSLFVHMVKF---GVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSP 406
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ Y + C E R AEA +L + + + Y++LI + + A L
Sbjct: 407 DVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLC 466
Query: 462 RDMREARIYDLKGSYLTIMTGLME-NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFC 520
+M + + ++ T++ G + + M + + ++ +V T + ++I A
Sbjct: 467 SEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVT--YTTLIDAHF 524
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
K +++A R M+ PND T+ L++G+
Sbjct: 525 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 558
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 101/477 (21%), Positives = 182/477 (38%), Gaps = 79/477 (16%)
Query: 152 MRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECC------ 205
MR + + A++ + + R F +W + + I R V V +CC
Sbjct: 192 MRCSPDSKACLAILNGLVRRRRFD--SVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFP 249
Query: 206 ---RIALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
LDE +KPN+Y + C + +AEK+ E M + GV PN ++
Sbjct: 250 SKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRE-NKMEEAEKMFELMKIHGVVPNLYTYSA 308
Query: 262 L-------AYLYALKGLQEKIVELESLMN----------------------------EFG 286
+ L GL ++I+ E L N +FG
Sbjct: 309 MIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFG 368
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNG 344
+ Y+ LI G K GN+ A + ME + S + TY ++ G
Sbjct: 369 VDPNLYVYNCLIHGQCKSGNMLEAMGLL------SEMESLNLSPDVFTYTILINGLCTEE 422
Query: 345 NVKGLANLI--IEAQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSILDEMNACGCSV 401
+ L ++ +++ PS + + + GF C + +KA + EM + G
Sbjct: 423 RLAEANRLFQRMKNERIFPSSVTYNSLIHGF-----CKEYNI-EKALDLCSEMTSSGVEP 476
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ + + YCK A L +++ G+ DV Y LI+A + + A L+
Sbjct: 477 NIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLY 536
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE-----VKTHDW---- 512
DM EA I+ ++ ++ G + R ++ +D +E+ + V+ W
Sbjct: 537 SDMLEAGIHPNDHTFACLVDGFWKEGR---LSDAIDFYLENNQAATGKSIVQRSCWKYVG 593
Query: 513 -NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+I C+ G + A R M P+ +Y+S++ ++ E+ + MM H
Sbjct: 594 FTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHL-REKRITDTMMLH 649
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 158/384 (41%), Gaps = 74/384 (19%)
Query: 239 DAEKVIETMSVLGVRPNESSFGF-LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
DA ++ + M+ GV+P+E + ++ L L+ ++ +++ M E GF + YSS+
Sbjct: 203 DAVRLFDEMAGAGVKPDERVYAITISGLCKLRD-ADRALQVLGKMREAGFEPWELTYSSV 261
Query: 298 ISGYVKLGNLESASR------------------TILL---CLGGGNMEQSDFSKE----- 331
+ VK+G ++ A R T+L+ CL G + D E
Sbjct: 262 VDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDG 321
Query: 332 ------TYCEVVKGFLQNG---NVKGLANLIIEAQKLEPS--------GIVVDR--SVGF 372
TY ++KG G L +IE L + G++ D+
Sbjct: 322 VTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAI 381
Query: 373 GIISACVNLGLSD------------------KAHSILDEMNACGCSVGLGVYVPTLKAYC 414
G++ V+ G+ D +A ++ D+M G + Y L YC
Sbjct: 382 GLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYC 441
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
++ R EA +L ++ G + Y L++ I + F +A++L +MR+ +
Sbjct: 442 EKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDY 501
Query: 475 SYLTIMTGLMENHR----PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+Y ++ GL +R E++ FL E T +NSII+ F KAG + A
Sbjct: 502 TYNILINGLYMVNRVCEVDEMLKRFLSE-----GFVPTTMTYNSIINGFVKAGMMGSAFG 556
Query: 531 TLRRMIFLQFEPNDQTYLSLINGY 554
R+M PN TY S I+GY
Sbjct: 557 MYRQMRKKGITPNIVTYTSFIDGY 580
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 147/380 (38%), Gaps = 48/380 (12%)
Query: 213 LDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
+D P+++ + C Q + +A + + M GV+P+ ++ L Y KG
Sbjct: 388 VDTGVPDVFTYGCLIHWLCKH-QKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRM 446
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS--K 330
++ ++L S M + GF V Y++L+ GY+K ++A + M Q+ S
Sbjct: 447 DEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALL------NEMRQNGVSCGD 500
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY ++ G V + ++ ++ G V II+ V G+ A +
Sbjct: 501 YTYNILINGLYMVNRVCEVDEML---KRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGM 557
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+M G + + Y + YC+ + A +L++ + G+Q D+ Y+A I+
Sbjct: 558 YRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCK 617
Query: 451 SQDFQSAFS----LFRD---------------------MREA----------RIYDLKGS 475
+ A L +D M EA R+
Sbjct: 618 QGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEI 677
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
Y T++ G + E++ + V + ++ H C++G ++ AKR L M
Sbjct: 678 YTTLIDGFSKVGNVAFALELYSEMMAN-HVIPDDKTFTALTHGLCRSGDIDGAKRLLDDM 736
Query: 536 IFLQFEPNDQTYLSLINGYV 555
L PN TY LIN V
Sbjct: 737 RRLDVSPNIVTYNMLINACV 756
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 3/201 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMN-ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
++ V +G D+A + D+M A G + + + + YC +A L ++ S
Sbjct: 261 VVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSD 320
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G+ Y LI+ + L R M E + + ++ GL+ + R +
Sbjct: 321 GVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDA 380
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
L+ VV+ +V T + +IH CK +L +A +M +P+ TY SL+
Sbjct: 381 IGLLELVVDTGVPDVFT--YGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLL 438
Query: 553 GYVTAEQYFSVLMMWHEIKRK 573
GY + L ++ E+ K
Sbjct: 439 GYCEKGRMDEALKLYSEMPDK 459
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 8/229 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PNI + ++G C A K++ + G++P+ +++ + +G +
Sbjct: 566 ITPNIVTYTSFIDGYCR-TNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRA 624
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L+ + G + + Y+S ++GY L + AS+ + ++ E Y
Sbjct: 625 LHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMI----KQRVVADTEIYTT 680
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ GF + GNV L E + + ++ D + G D A +LD+M
Sbjct: 681 LIDGFSKVGNVAFALELYSE---MMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMR 737
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
S + Y + A ++ + EA QL ++ SSG+ D YD L
Sbjct: 738 RLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 70/167 (41%)
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A ++ DEM GC +Y ++A + +A +L +++ +G++ D Y I
Sbjct: 169 ALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITIS 228
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+D A + MREA + +Y +++ L++ R + D+++ +
Sbjct: 229 GLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKK 288
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ ++H +C G + A ++ P + TY LI G
Sbjct: 289 MDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKG 335
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 136/326 (41%), Gaps = 30/326 (9%)
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
LG+RP+ ++ + + A FS M F L+ E
Sbjct: 128 LGLRPSTQNYCIVVHTLAWSR---------------NFSQAMKFLCELVELVKDDLPSED 172
Query: 310 ASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK-GLANLIIEAQKLEPSGIVVDR 368
+ ++LC E ++ + +VK +L+ G V+ GL + +++ G V
Sbjct: 173 VFKNLILC-----TEDCNWDPVVFDMLVKAYLRMGRVREGLRSF----RRMLRVGFVPTV 223
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+++ + L +D+ + +EM G + L + CK+ T + + +
Sbjct: 224 ITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEK 283
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENH 487
+ G D+ Y+ LI + AF L++ M R + DL SY +M GL +
Sbjct: 284 MEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLV-SYTALMNGLCKEG 342
Query: 488 R-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
R E F V ++ T +N++IH +CK G++++++ L MI+ P+ T
Sbjct: 343 RVREAHQLFHRMVHRGLSPDIVT--YNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFT 400
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKR 572
L+ GY ++ S L + E++R
Sbjct: 401 CWVLVEGYGKEGKFLSALNLVVELQR 426
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 129/337 (38%), Gaps = 50/337 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P + N L G L +V E M G+ PN +F L ++ G K+ +
Sbjct: 221 PTVITSNYLLNGL-LKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNK 279
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M E GF +V Y++LI+ Y + G L+ A + G + +Y ++
Sbjct: 280 FLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPD----LVSYTALM 335
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + G V+ +AH + M
Sbjct: 336 NGLCKEGRVR--------------------------------------EAHQLFHRMVHR 357
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G S + Y + YCKE + E+ L+ D+ +G+ D L+E F SA
Sbjct: 358 GLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSA 417
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNS 514
+L +++ + + Y ++ L +RP L+ + +D P +E+ +N
Sbjct: 418 LNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEI----YNE 473
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+I +FC+ + +A M+ + +PN TY ++I
Sbjct: 474 LIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVI 510
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 144/390 (36%), Gaps = 21/390 (5%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIE 134
L+ L N TD W+ ++ + + P+ N L L D + + +E
Sbjct: 230 LNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEK----ME 285
Query: 135 KNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNF 194
+ D T +TL+ S AF L K M++ + + +C++
Sbjct: 286 EEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVR 345
Query: 195 VAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
A ++F L P+I N + G C + ++ ++ M G+ P
Sbjct: 346 EAH-QLFHRMVHRGL-------SPDIVTYNTLIHGYCKE-GKMQESRSLLHDMIWNGISP 396
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
+ + L Y +G + L + FG S YS LI + N A++ +
Sbjct: 397 DSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCR-ENRPFAAKNL 455
Query: 315 LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
L + + E Y E++K F Q +A ++ ++ I + + +
Sbjct: 456 LERMSKDGHKPE---LEIYNELIKSFCQ---CDCIAEALLLKMEMVDKEIKPNLATYRAV 509
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
I L S + S++ EM A G L + YC+E+ +A L+ +
Sbjct: 510 IGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQ 569
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDM 464
D +++ALI + D + + +DM
Sbjct: 570 IHDTESFNALIRITSAKGDIARSLEI-QDM 598
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 148/359 (41%), Gaps = 29/359 (8%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
RPN S+ L L ++ V L M G + +V Y +LI G ++ A
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 313 TILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
+ G M +S Y +++G+ ++G + + + +E + GI D +
Sbjct: 172 LM------GEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVE---MSEKGIEPDVVM 222
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
G+I + +G + KAH ++D M G + Y + CKE EA ++ +S
Sbjct: 223 YTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMS 282
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR--IYDLKGSYLTIMTGLMENHR 488
G+ DV Y+ LI+ + A L +M + + ++ +++ GL + R
Sbjct: 283 EKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGR 342
Query: 489 PELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+ AF + ++E+ V +N +I + ++ A + M L EP+ TY
Sbjct: 343 --MRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTY 400
Query: 548 LSLINGYVTAEQYFSVLMMWHEIKRK---ISTDGQKGIKFEHNLVDAFLYALVKGGFFD 603
LI G+ MW ++ R +ST +GI+ E L A+ + G +
Sbjct: 401 SILIKGFCK---------MW-QVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMME 449
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 182/411 (44%), Gaps = 23/411 (5%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
+E+ ++ ++ + ++P++ ++ C + A V++ M G+ PN ++
Sbjct: 201 WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK-VGKAKKAHGVMDMMVRRGLEPNVVTYN 259
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L +G ++ + + M+E G + +V Y++LI G + ++ A + + G
Sbjct: 260 VLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRG 319
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
N+ + + T+ V++G G ++ + +E +G +V+ +I +
Sbjct: 320 KNIVKPNVV--TFNSVIQGLCDIGRMRQAFQV---RAMMEETGCMVNLVTYNLLIGGLLR 374
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
+ KA ++DEM + G Y +K +CK + A L+ + G++ ++ +
Sbjct: 375 VHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFH 434
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME----NHRPELMAAFL 496
Y L+ A + A +LF +M D+ +Y T++ G + EL+ + +
Sbjct: 435 YIPLLVAMCEQGMMERARNLFNEMDNNFPLDVV-AYSTMIHGACKAGDLKTAKELLKSIV 493
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
DE + V ++ +I+ F K+G +E A L++M F P+ + SLI GY T
Sbjct: 494 DEGLTPDAVT-----YSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548
Query: 557 AEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQ 607
+ VL E+ R++ T K I + ++ +LV A++Q
Sbjct: 549 KGEINKVL----ELIREMIT---KNIALDSKIISTLSTSLVASNEGKALLQ 592
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 143/353 (40%), Gaps = 35/353 (9%)
Query: 233 GLQSVSDAEKVIETMSVL---GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
GL ++ +K +E M + G+ PN + L Y G E + ++ M+E G
Sbjct: 159 GLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEP 218
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGG--------NMEQSDFSKETYCEVVKGFL 341
+V Y+ LI K+G + A + + + G N+ + KE + G L
Sbjct: 219 DVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVL 278
Query: 342 QNGNVKGLA------NLIIEA---------------QKLEPSGIVVDRSVGF-GIISACV 379
+ + KG+A N +I+ + + IV V F +I
Sbjct: 279 KKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLC 338
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
++G +A + M GC V L Y + + H+ +A +L+ +++S GL+ D
Sbjct: 339 DIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSF 398
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y LI+ A L MR+ I Y+ ++ + E E +E+
Sbjct: 399 TYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM 458
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
D + ++++IH CKAG L+ AK L+ ++ P+ TY +IN
Sbjct: 459 --DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVIN 509
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 146/358 (40%), Gaps = 13/358 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++ C Q + DA + E + RP+ ++ L G ++ +
Sbjct: 442 PNVITVNIMVDRLCKA-QRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK 500
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLGGGNMEQSDFSKETYCE 335
L M + V Y+SLI + K G E + +L LG TY +
Sbjct: 501 LYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLG---CSPDLLLLNTYMD 557
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V + G ++ L E + L G + D +I V G + +A+ + M
Sbjct: 558 CV---FKAGEIEKGRALFQEIKNL---GFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC + Y + +CK + +A QL+ ++ + G + V Y ++I+
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLD 671
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A+ LF + + I Y +++ G + R + ++E+++ + + WN +
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG-LTPNVYTWNCL 730
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ A KA + +A + M L+ PN TY LI+G ++ + W E++++
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQ 788
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
SD ++ +M G +V + ++ ++ + +E R A L+ ++ S+ L+ DV Y+
Sbjct: 216 SDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNV 275
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
I+ + A+ F +M+ + +Y +++ L + R + + ++
Sbjct: 276 CIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+V + +N++I + AG+ EDA L R
Sbjct: 336 QVPC-AYAYNTMIMGYGMAGKFEDAYSLLER 365
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 108/297 (36%), Gaps = 50/297 (16%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
+ + +A I+TM L RP S++ L + + ++ L M E G++ + +
Sbjct: 179 RKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLF 238
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLII 354
++LI + F + G V +L+
Sbjct: 239 TTLI---------------------------------------RVFAREGRVDAALSLLD 259
Query: 355 E--AQKLEPSGIVVDRSVG-FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
E + LEP ++ + + FG G D A EM A G + Y +
Sbjct: 260 EMKSNSLEPDVVLYNVCIDCFG------KAGKVDMAWKFFHEMKANGLVLDDVTYTSMIG 313
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
CK R EA +L + + Y+ +I + F+ A+SL R
Sbjct: 314 VLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP 373
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
SY I++ L + + +E+ +D + T +N +I CKAG+LE A
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLST--YNIMIDMLCKAGKLETA 428
>gi|15241779|ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9502152|gb|AAF88005.1| similar to a large family of Arabidopsis thaliana salt inducible
protein-like proteins; contains similarity to Pfam
family PF01535 (Domain of unknown function),
score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
gi|332006410|gb|AED93793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 125/286 (43%), Gaps = 13/286 (4%)
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGL 349
V Y+ LI GY + G LE+A + M++ + T +V G ++ GL
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVV------SRMKEDEIKPNVVTVNTIVGGMCRH---HGL 457
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
++ +E G+ + +I AC ++ +KA ++M GCS +Y
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ C+ R +A ++V + G LD+ Y+ LI + + + + DM +
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+Y T+++ ++ E + ++++ ED ++ + ++I A+C G L++A
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDG-LDPTVTTYGAVIDAYCSVGELDEAL 636
Query: 530 RTLRRM-IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+ + M + + PN Y LIN + + L + E+K K+
Sbjct: 637 KLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD---LKGSYL---T 478
LV+ + ++ DV LI S+ A +F MR R D +K + T
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ GL + R + L + + R +N +I +C+AG+LE AK + RM
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 539 QFEPNDQTYLSLING 553
+ +PN T +++ G
Sbjct: 436 EIKPNVVTVNTIVGG 450
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
SV L ++ +L CK R A ++ D+ + L+ ++AL+ + D
Sbjct: 259 SVWLTRFISSL---CKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMND 315
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRP----ELMAAFLDEVVEDPRV-EVKTHDWNS 514
L M E +I + ++ L ++ R E+ + +D V + + +N+
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375
Query: 515 IIHAFCKAGRLEDAKRTLRRM-IFLQFEPNDQTYLSLINGYVTA 557
+I CK GRL++A+ L RM + + PN TY LI+GY A
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 146/358 (40%), Gaps = 13/358 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N ++ C Q + DA + E + RP+ ++ L G ++ +
Sbjct: 442 PNVITVNIMVDRLCKA-QRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK 500
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLGGGNMEQSDFSKETYCE 335
L M + V Y+SLI + K G E + +L LG TY +
Sbjct: 501 LYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLG---CSPDLLLLNTYMD 557
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V + G ++ L E + L G + D +I V G + +A+ + M
Sbjct: 558 CV---FKAGEIEKGRALFQEIKNL---GFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC + Y + +CK + +A QL+ ++ + G + V Y ++I+
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLD 671
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A+ LF + + I Y +++ G + R + ++E+++ + + WN +
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG-LTPNVYTWNCL 730
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ A KA + +A + M L+ PN TY LI+G ++ + W E++++
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQ 788
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 84/189 (44%), Gaps = 1/189 (0%)
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
SD ++ +M G +V + ++ ++ + +E R A L+ ++ S+ L+ DV Y+
Sbjct: 216 SDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNV 275
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
I+ + A+ F +M+ + +Y +++ L + R + + ++
Sbjct: 276 CIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+V + +N++I + AG+ EDA L R P+ +Y +++ Q
Sbjct: 336 QVPC-AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEA 394
Query: 564 LMMWHEIKR 572
L + E+K+
Sbjct: 395 LKKFEEMKK 403
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 108/297 (36%), Gaps = 50/297 (16%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
+ + +A I+TM L RP S++ L + + ++ L M E G++ + +
Sbjct: 179 RKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLF 238
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLII 354
++LI + F + G V +L+
Sbjct: 239 TTLI---------------------------------------RVFAREGRVDAALSLLD 259
Query: 355 E--AQKLEPSGIVVDRSVG-FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
E + LEP ++ + + FG G D A EM A G + Y +
Sbjct: 260 EMKSNSLEPDVVLYNVCIDCFG------KAGKVDMAWKXFHEMKANGLVLDDVTYTSMIG 313
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
CK R EA +L + + Y+ +I + F+ A+SL R
Sbjct: 314 VLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP 373
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
SY I++ L + + +E+ +D + T +N +I CKAG+LE A
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLST--YNIMIDMLCKAGKLETA 428
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
IL+EM+ G + + ++ K + EA + + + Y LI A
Sbjct: 152 ILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALS 211
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
TS+D +LF+ M+E + T++ R + + LDE+ + +E
Sbjct: 212 TSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNS-LEPDV 270
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+N I F KAG+++ A + M +D TY S+I A++
Sbjct: 271 VLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADR 320
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 181/451 (40%), Gaps = 61/451 (13%)
Query: 110 IAHLSSLQDNHNLKRAFASVVYVIEKNPKL---LDFQTVHTLLGSMRNANTAAPAFALVK 166
I LSSL + + + + V ++++ ++ D T +TL+ + N A+ A ALV
Sbjct: 150 IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVD 209
Query: 167 CMFKNRYFMPFELWGGFLVDICRKNSNFVAF--LKVFEECCRIALDENLDFMKPNIYACN 224
M + +G + +C++ +A LK E+ ++ ++ N
Sbjct: 210 QMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEK----------GKIEADVVIYN 259
Query: 225 AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE 284
++G C + + DA + M G+RP+ ++ L G L S M E
Sbjct: 260 TIIDGLC-KYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIE 318
Query: 285 FGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS-DFSKETYCEVVKGFLQN 343
+ +V +S+LI +VK G L A + L +++S D TY ++ GF +
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEK-----LYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
+ D+A + + M + C +
Sbjct: 374 DRL--------------------------------------DEAKHMFELMISKDCFPNV 395
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y +K +CK R E +L ++S GL + Y+ LI+ + D A +F+
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M + +Y ++ GL + + E A + E ++ ++E + +N +I CKAG
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLE-KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++ED + +PN Y ++I+G+
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 147/378 (38%), Gaps = 48/378 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+I ++ L G C+ + +SDA +++ M +G +P+ +F L + L + V
Sbjct: 147 EPDIVTLSSLLNGYCHS-KRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV 205
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YC 334
L M + G +V Y ++++G K G+++ A + ME+ + Y
Sbjct: 206 ALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLL------KKMEKGKIEADVVIYN 259
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG--------LSD- 385
++ G + ++ L K+E GI D +IS N G LS+
Sbjct: 260 TIIDGLCKYKHIDDAFALF---NKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNM 316
Query: 386 --------------------------KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
+A + DEM + Y + +C R
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
EA + + S +V Y+ LI+ ++ + LFR+M + + +Y T+
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ GL + ++ ++V D V ++ ++ CK G+LE A + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 540 FEPNDQTYLSLINGYVTA 557
EP+ TY +I G A
Sbjct: 496 MEPDIYTYNIMIEGMCKA 513
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD---ALIEASIT 450
M +C V LG+ K R A+ + S G+ +YD L ++
Sbjct: 1 MTSC---VHLGIVASQSKKMSLAKRFAQLRKASPLFSLRGVYFSAASYDYREKLSRNALL 57
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ A LF +M ++R + +++ + + + +L+ + L E +++ R+ +
Sbjct: 58 NLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVIS-LGERMQNLRISYDLY 116
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+N +I+ FC+ +L A L +M+ L +EP+ T SL+NGY +++
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKR 165
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 144/342 (42%), Gaps = 13/342 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P + C A + C +SDA +V+E M + G +PN ++ L + +G K
Sbjct: 142 LAPCVVTCTAVINAYCKE-GRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 200
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L + M G + V Y+ LI G G++ESA R + L G G + + TY
Sbjct: 201 MTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIAD----QYTYNA 256
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ ++G +L +E + ++P+ + + +I+ G +D A L++
Sbjct: 257 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFN-----SLINGLCKSGKADIAWKFLEK 311
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + GC+ Y ++ CK + E + ++ ++ NY +I + ++
Sbjct: 312 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 371
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ + +M + +Y T M R L E+ ++ V V T +N
Sbjct: 372 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG-VTVDTMAYN 430
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+++ G+ + A L++M + PN TY L+ V
Sbjct: 431 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV 472
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 133/305 (43%), Gaps = 16/305 (5%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G RP+ +F L Y + +L M GF+ +V Y++LI G + G ++ A
Sbjct: 5 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
G M+Q D Y +VKG L N +G L++ + E R+
Sbjct: 65 VELF------GEMDQPDM--HMYAALVKG-LCNAE-RGEEGLLMLRRMKELGWRPSTRAY 114
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
+ C + +A +L EM G + + + AYCKE R ++A +++ +
Sbjct: 115 AAVVDFRCRERK-AKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 173
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG-LMENHRP 489
G + +V Y+AL++ A +L MR + +Y ++ G ++ H
Sbjct: 174 LRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGH-- 231
Query: 490 ELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
+ +AF L ++E + + +N++I+A CK GR + A + +PN T+
Sbjct: 232 -IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFN 290
Query: 549 SLING 553
SLING
Sbjct: 291 SLING 295
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 167/430 (38%), Gaps = 96/430 (22%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN++ NA ++G C V A ++ M GV P+ ++ L + G E
Sbjct: 178 KPNVWTYNALVQGFC-NEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------SRTIL------------L 316
L LM G + Y++LI+ K G + A +R I L
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296
Query: 317 CLGGG---------NMEQSDFSKETYCEVVKGFLQN-----GNVKGLANLIIEAQK-LEP 361
C G M + + +TY F+++ G+ +GL+ + QK ++P
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTY--TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 354
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
S V+ ++ + N GL + EM + GC+ + Y +++AYC E R E
Sbjct: 355 S--TVNYTIVIHKLLKERNYGLVARTWG---EMVSSGCNPDVVTYTTSMRAYCIEGRLNE 409
Query: 422 ATQLVMDISSSGLQLDVGNYDALIE---------------------ASITSQ-------- 452
A ++M++S +G+ +D Y+ L++ AS+ +Q
Sbjct: 410 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 469
Query: 453 -----------------------DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+ F LF M++ G+Y +I+ G E+ R
Sbjct: 470 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 529
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
E + + + ED + + + +++ FCK+ R DA + MI F P +Y
Sbjct: 530 EEATSLVSLMKEDS-ISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQH 588
Query: 550 LINGYVTAEQ 559
L++G + Q
Sbjct: 589 LLSGLICEGQ 598
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 153/386 (39%), Gaps = 55/386 (14%)
Query: 193 NFVAFLKVFEECCRIA-LDENLDFM----KPNIYACNAALEGCCYGLQSVSDAEKVIETM 247
+ V++ + E C +DE ++ +P+++ A ++G C + + ++ M
Sbjct: 44 DVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNA-ERGEEGLLMLRRM 102
Query: 248 SVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYVKL 304
LG RP+ ++ A + + + K E E ++ E G + +V +++I+ Y K
Sbjct: 103 KELGWRPSTRAY---AAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKE 159
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
G + A R + L + + TY +V+GF G V
Sbjct: 160 GRMSDALRVLELM----KLRGCKPNVWTYNALVQGFCNEGKVH----------------- 198
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
KA ++L++M ACG + Y ++ C + A +
Sbjct: 199 ---------------------KAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFR 237
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L+ + GL D Y+ALI A A SLF + I ++ +++ GL
Sbjct: 238 LLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLC 297
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
++ + ++ FL+++V T+ ++S I CK ++ + M+ +P+
Sbjct: 298 KSGKADIAWKFLEKMVS-AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 356
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEI 570
Y +I+ + Y V W E+
Sbjct: 357 VNYTIVIHKLLKERNYGLVARTWGEM 382
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D A + D+M G + + Y ++ C+ R EA +L ++ Q D+ Y AL
Sbjct: 27 DVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAAL 82
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED-- 502
++ ++ + + R M+E +Y ++ + + L E+ E
Sbjct: 83 VKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGL 142
Query: 503 -PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
P V T ++I+A+CK GR+ DA R L M +PN TY +L+ G+ +
Sbjct: 143 APCVVTCT----AVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 198
Query: 562 SVLMMWHEIK 571
+ + ++++
Sbjct: 199 KAMTLLNKMR 208
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
G Y L+ + ++ RT EAT LV + + L+ Y AL+ S+ + A+ L
Sbjct: 514 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCS 573
Query: 464 MREARIYDLKGSYLTIMTGLM-ENHRPELMAAFLDEVVED--PRVEVKTHDWNSIIHAFC 520
M + SY +++GL+ E + F++ +D P V W II
Sbjct: 574 MIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIV----WKVIIDGLI 629
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
K G + ++ + + + P+ QTY L
Sbjct: 630 KKGHSDISREMIIMLERMNCRPSHQTYAML 659
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 154/377 (40%), Gaps = 53/377 (14%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
F++CC A + P++Y A+ C G V +A ++ M GV PN ++
Sbjct: 234 FQKCCE-AFHVVCKGVSPDVYLFTTAINAFCKG-GKVEEAIELFSKMEEAGVVPNVVTYN 291
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
+ + G ++ + M E G ++ YS L+ G K + A
Sbjct: 292 TVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDA---------- 341
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
YC V+K + G P+ IV + +I + +
Sbjct: 342 ------------YC-VLKEMTEKG--------------FPPNVIVYNN-----LIDSLIE 369
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G +KA I D M + G S+ Y +K YCK + A +L+ ++ S G ++ G+
Sbjct: 370 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGS 429
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP----ELMAAFL 496
+ ++I + F SA +M + G T+++GL ++ + EL FL
Sbjct: 430 FTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFL 489
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
++ V T N+++H C+AG+LE+ R + ++ F + +Y +LI+G
Sbjct: 490 NK-----GFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCG 544
Query: 557 AEQYFSVLMMWHEIKRK 573
++ M E+ +K
Sbjct: 545 NKKLDEAFMFMDEMVKK 561
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 175/488 (35%), Gaps = 111/488 (22%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
+ + DA V++ M+ G PN + L G K +E++ LM G S Y
Sbjct: 336 KRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTY 395
Query: 295 SSLISGYVKLGNLESASR-----------------TILLCL------------------- 318
++LI GY K G + A R T ++CL
Sbjct: 396 NTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLL 455
Query: 319 -----GGGNM--------EQSDFSK--ETYCEVV-KGFLQNGNV-KGLANLIIEAQKLEP 361
GGG + + SK E + + + KGFL + L + + EA KLE
Sbjct: 456 RNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEE 515
Query: 362 S----------GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY----- 406
G V+DR +IS C D+A +DEM G Y
Sbjct: 516 GFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIR 575
Query: 407 -----------------------VPTLKAY-------CKEHRTAEATQLVMDISSSGLQL 436
+P + Y CK RT E +L ++ S+ LQ
Sbjct: 576 GLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQP 635
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
+ Y+ LI A S A L DM+ I +Y +++ G+ R E L
Sbjct: 636 NTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLL 695
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+E+ + +E + ++I + K G++ + LR M PN TY +I GY
Sbjct: 696 EEMRMEG-LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 754
Query: 557 AEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE-- 614
+ HE++ +KGI + F+Y +K G V+Q + S E
Sbjct: 755 DGNVTEASRLLHEMR-------EKGIVPDSITYKEFIYGYLKQG---GVLQAFKGSDEEN 804
Query: 615 MKVFVDKW 622
++ W
Sbjct: 805 YAAIIEGW 812
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQ 290
+ V +A+ ++E M + G+ PN + L Y G ++V++E L+ E
Sbjct: 685 ISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLG---QMVKVECLLREMHSKNVHPN 741
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNV 346
+ Y+ +I GY + GN+ ASR + M + + TY E + G+L+ G V
Sbjct: 742 KITYTVMIGGYARDGNVTEASRLL------HEMREKGIVPDSITYKEFIYGYLKQGGV 793
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 155/397 (39%), Gaps = 17/397 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF-GFLAYLYALKGLQEK 274
++P+I + N ++G C + + DA ++I M G P++ S+ +A+L + ++E
Sbjct: 298 IEPDIVSYNCLIKGYC-DVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEV 356
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+E+++ V Y++LI K G+ + A L+ L + K Y
Sbjct: 357 KRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDA----LVFLREAEEKGFHIDKVGYS 412
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
VV F +N N+ +L+I+ + G D II +G D+A +L +M
Sbjct: 413 AVVDSFCKNKNIDKAKSLVID---MYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM 469
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
GC Y L C ++ EA +++ + Y A++
Sbjct: 470 YKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKL 529
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A L R+M E ++ L N +L+E + V ++ S
Sbjct: 530 SEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKG-CAVNVVNFTS 588
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+I+ FC+ G L+ A L M P+ TY +L + + E I
Sbjct: 589 VIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSR-------LDEASELI 641
Query: 575 STDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
KGI A ++ + G D +M+++EK
Sbjct: 642 VKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEK 678
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 122/316 (38%), Gaps = 46/316 (14%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A +++ M+ G+ + +F ++ Y+ G+ + + +LM + G + ++ I
Sbjct: 216 ARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIY 275
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
VK LE A R FL+ V G+ I+ L
Sbjct: 276 VLVKGNKLEKALR---------------------------FLERMKVAGIEPDIVSYNCL 308
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
I ++ D A ++ EM GC Y + CK+ +
Sbjct: 309 ---------------IKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKV 353
Query: 420 AEATQLVMD-ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
E +L+ + + +S L D Y+ LI A A R+ E + K Y
Sbjct: 354 EEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSA 413
Query: 479 IMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++ +N + + +D + +V T + +II FC+ G++++AK+ L++M
Sbjct: 414 VVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVT--YTAIIDGFCRVGKIDEAKKMLQQMYK 471
Query: 538 LQFEPNDQTYLSLING 553
+PN TY L+NG
Sbjct: 472 HGCKPNTVTYTVLLNG 487
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 115/265 (43%), Gaps = 10/265 (3%)
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
+V+Y+ L + L +R IL + +E+S E + V+ + + G ++
Sbjct: 198 IVYYTML--DILSKTRLCQGARRILRLMTRRGIERS---PEAFSYVMVSYSRAGMLRNAL 252
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
++ QK +G+ D S+ I V +KA L+ M G + Y +
Sbjct: 253 RILTLMQK---AGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLI 309
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-REARI 469
K YC HR +A +L+ ++ G D +Y ++ + + L +M + + +
Sbjct: 310 KGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNL 369
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+ +Y T++ L ++ + FL E E+ + +++++ +FCK ++ AK
Sbjct: 370 IPDQVTYNTLIYALSKHGHADDALVFLREA-EEKGFHIDKVGYSAVVDSFCKNKNIDKAK 428
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGY 554
+ M P+ TY ++I+G+
Sbjct: 429 SLVIDMYSKGCNPDVVTYTAIIDGF 453
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 109/264 (41%), Gaps = 28/264 (10%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
G + +V Y+++I G+ ++G ++ A + + G + TY ++ G NG
Sbjct: 438 GCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNT----VTYTVLLNGLCHNGK 493
Query: 346 ---VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC--- 399
+ + N + E P+ I ++ G +A + EM G
Sbjct: 494 SLEAREMIN-VSEEHWWTPNAITYS-----AVMHGLRREGKLSEACDLTREMIEKGFLPN 547
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
V + + + +L C+ A + + + G ++V N+ ++I D +A S
Sbjct: 548 PVDINLLIQSL---CRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALS 604
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHR----PELMAAFLDEVVEDPRVEVKTHDWNSI 515
+ DM + + +Y T+ L + R EL+ L + ++ V + ++
Sbjct: 605 MLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVT-----YRAV 659
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQ 539
IH FC+ GR++D + L +MI Q
Sbjct: 660 IHRFCQWGRVDDMMKLLEKMIARQ 683
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 130/324 (40%), Gaps = 47/324 (14%)
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV 292
G+ +V A V M V G PN +F L Y ++G + + + + M E GF +V
Sbjct: 296 GIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVV 355
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLA 350
Y++LI G G + A ME++ S TY ++ GF + G++ G
Sbjct: 356 AYNTLIHGLCSHGKMGEAVSV------SSKMERNGCSPNVSTYGALIDGFAKAGDLVG-- 407
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
A I ++M GC + VY +
Sbjct: 408 ------------------------------------ASEIWNKMMTNGCIPNVVVYTSMV 431
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
C+ ++A L+ +S+ + ++ I+ S + A +LF M +
Sbjct: 432 NVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCS 491
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+Y ++ GL++ +R + + E+ E+ +E+ +N+I FC G+ E+A +
Sbjct: 492 PNIKTYNEVLDGLLKENRIKEALELVTEM-EEKGMELNLVTYNTIFGGFCNVGKFEEALK 550
Query: 531 TLRRMIFLQFEPNDQTYLSLINGY 554
L +M+ +P+ TY +L Y
Sbjct: 551 LLGKMLVGGVKPDAITYNTLTYAY 574
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 145/348 (41%), Gaps = 29/348 (8%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V + +++ M + G+ +E F + Y GL E+ +++ + EFG + Y+
Sbjct: 95 VDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNH 154
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE----TYCEVVKGFLQNGNVKGLANL 352
L+ + S +R ++ NM++ KE TY ++K +N V G L
Sbjct: 155 LLDAML------SENRFQMIEPIYSNMKRD--GKEPNVYTYNILLKALCKNNRVDGACKL 206
Query: 353 IIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
++E + EP VV + +IS+ LG ++A + + VY +
Sbjct: 207 LVEMSNKGCEPD--VVSYTT---VISSMSKLGKVEEARELSIRFQP-----NVSVYNALI 256
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
+C+E++ E L+ + G+ +V Y +I + + + A +++ M
Sbjct: 257 NGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCS 316
Query: 471 DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
++ ++M G R + + E+ E +N++IH C G++ +A
Sbjct: 317 PNVYTFTSLMKGYFMRGRVLEALNIWNRMAEE-GFEPNVVAYNTLIHGLCSHGKMGEAVS 375
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
+M PN TY +LI+G+ A +W+ K+ T+G
Sbjct: 376 VSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWN----KMMTNG 419
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 153/391 (39%), Gaps = 26/391 (6%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D +PN+Y N L+ C V A K++ MS G P+ S+ + + G E
Sbjct: 178 DGKEPNVYTYNILLKALCKN-NRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVE 236
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ EL F + Y++LI+G+ + E + + L LG + D + TY
Sbjct: 237 EARELS-----IRFQPNVSVYNALINGFCR----EYKVKEVFLLLGQMVEKGIDPNVITY 287
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
V+ GNV+ LA L + A K+ G + ++ G +A +I +
Sbjct: 288 STVISSLSGIGNVE-LA-LAVWA-KMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNR 344
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G + Y + C + EA + + +G +V Y ALI+ + D
Sbjct: 345 MAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGD 404
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A ++ M Y +++ L + + ++++ D T +N
Sbjct: 405 LVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTD-NCPPNTVTFN 463
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ I C +GR+E A +M PN +TY +++G + + L + E++ K
Sbjct: 464 TFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEK 523
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDA 604
E NLV Y + GGF +
Sbjct: 524 ---------GMELNLVT---YNTIFGGFCNV 542
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 150/362 (41%), Gaps = 25/362 (6%)
Query: 204 CCRIALDENLDFMKPNIYA---------CNAALEGCCYG--LQSVSDAEKVIETMSVLGV 252
CCR E D + ++A C + C ++V+D + MS +G
Sbjct: 191 CCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTD---LFRRMSEMGT 247
Query: 253 RPNESSFGFLAYLYAL--KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
PN ++ A++ L +G ++ + M G + ++SLI G K+G +E A
Sbjct: 248 PPNMVNYS--AWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERA 305
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
R L + + + + TY ++ G+ + G LA + ++ G+ + +
Sbjct: 306 FRLFLKLVKSSSYKPN---VHTYTVMIGGYCKEGK---LARAEMLLGRMVEQGLAPNTNT 359
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
+I G D+A ++++M G + Y + +CK+ + EA +++ +
Sbjct: 360 YTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMAT 419
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
S GL LD Y LI A LF+ M E + +Y TI+ + + E
Sbjct: 420 SQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQME 479
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
D+ + V K + S+I +C+ G+L A + RM+ P+ TY +L
Sbjct: 480 QSQQLFDKCLSIGLVPTK-QTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGAL 538
Query: 551 IN 552
I+
Sbjct: 539 IS 540
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 146/359 (40%), Gaps = 12/359 (3%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN++ + G C ++ AE ++ M G+ PN +++ L + + G ++
Sbjct: 319 KPNVHTYTVMIGGYCKE-GKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAF 377
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
EL + M GF + Y+++I G+ K G ++ A + + + G K TY +
Sbjct: 378 ELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQG----LHLDKVTYTIL 433
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ + G++ +L +++ D II+ +++ + D+ +
Sbjct: 434 ITEHCKQGHITCALDLF---KQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLS 490
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G Y + YC+ + A ++ + G D Y ALI + +
Sbjct: 491 IGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEE 550
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A +LF M + + + +T+ + + +FLD + D R + T D +++
Sbjct: 551 ARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRL--DKRQQAHTAD--ALV 606
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
G L+ A L+ ++ + + TY S IN + +Y + +I ++IS
Sbjct: 607 RKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEKISKRIS 665
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 112/277 (40%), Gaps = 17/277 (6%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G+ D ++ C G ++A ++L M A G + ++A+C++ R
Sbjct: 176 GVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNV 235
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
T L +S G ++ NY A I+ + AF + +M + ++ +++ G
Sbjct: 236 TDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
L + E ++V+ + H + +I +CK G+L A+ L RM+ P
Sbjct: 296 LCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF- 601
N TY +LI+G+ + + ++ +K E L + + Y + GGF
Sbjct: 356 NTNTYTTLIHGHCKGGSFDRAFELMNK------------MKLEGFLPNIYTYNAIIGGFC 403
Query: 602 ----FDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKK 634
+V+ + + +DK Y E+ K+
Sbjct: 404 KKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQ 440
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 63/327 (19%), Positives = 115/327 (35%), Gaps = 50/327 (15%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
GVRP+ SF L +G E+ L + M GF + ++ + + G +
Sbjct: 176 GVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNV 235
Query: 311 S---RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
+ R + NM Y + G + G VK +++ +++ G+ +
Sbjct: 236 TDLFRRMSEMGTPPNMVN-------YSAWIDGLCERGYVKQAFHVL---EEMVGKGLKPN 285
Query: 368 RSVGFGIISACVNLGLSDKAHSI-LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+I +G ++A + L + + + Y + YCKE + A A L+
Sbjct: 286 VYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLL 345
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ GL + Y LI F AF L M+ + G + N
Sbjct: 346 GRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMK--------------LEGFLPN 391
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ +N+II FCK G++++A + LR + T
Sbjct: 392 ----------------------IYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVT 429
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRK 573
Y LI + L ++ ++ K
Sbjct: 430 YTILITEHCKQGHITCALDLFKQMAEK 456
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 150/331 (45%), Gaps = 14/331 (4%)
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV 346
+ + + +S+LIS Y + G L + + +L + G + + S Y V+ G V
Sbjct: 19 YGNTVFAHSALISAYARSG-LATEAMGVLESMKGAGLRPTTVS---YNAVIDA-CGKGGV 73
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
L Q L+ G+ DR +++AC G + A ++ DEM G + Y
Sbjct: 74 DLRFTLGYFRQMLQ-DGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTY 132
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ A CK ATQ+V+D+ ++ ++ +V Y L++ + + A L M+
Sbjct: 133 NTFVDAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKS 192
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
I + Y T++ ++ + + +A ++ +E+ +E T +NS+I+ + K GRL+
Sbjct: 193 LGIQLDRVCYNTLLAIYVKTGKYDEIATVCED-MENLGIEKDTVTYNSLINGYGKQGRLD 251
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEH 586
++ M P+ TY +LI+ Y A + ++ + K + G+K +
Sbjct: 252 MVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFK-------ESGLKADV 304
Query: 587 NLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
L +F+ L K G + + ++++ +M +
Sbjct: 305 VLFSSFIDTLAKNGLVECALSLLDEMIKMGI 335
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 128/323 (39%), Gaps = 48/323 (14%)
Query: 238 SDAEKVIETMSVLGVRPNESSFG---------------FLAYLYAL--KGLQEKIVELES 280
++A V+E+M G+RP S+ L Y + GL S
Sbjct: 40 TEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNS 99
Query: 281 L-------------------MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L M G + Y++ + K GN+E A++ +L
Sbjct: 100 LLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELATQVVL------ 153
Query: 322 NMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
+ME ++ TY ++ GF ++ + +K++ GI +DR +++ V
Sbjct: 154 DMEANNIKPNVVTYSTLMDGF---SKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYV 210
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
G D+ ++ ++M G Y + Y K+ R LV D+ + G+ V
Sbjct: 211 KTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVL 270
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y LI+ + AF+++ D +E+ + + + + L +N E + LDE+
Sbjct: 271 TYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEM 330
Query: 500 VEDPRVEVKTHDWNSIIHAFCKA 522
++ ++ +N+II AF K+
Sbjct: 331 IK-MGIKPNVVTYNTIIDAFGKS 352
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 12/217 (5%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
E ++ LD + +KPN+ + ++G L+ +A K+ E M LG++ + +
Sbjct: 145 MELATQVVLDMEANNIKPNVVTYSTLMDGFSK-LEKYDEALKLREKMKSLGIQLDRVCYN 203
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L +Y G ++I + M G V Y+SLI+GY K G L+ + +
Sbjct: 204 TLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLV------ 257
Query: 321 GNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
+M + TY ++ + + G N+ ++ + SG+ D + I
Sbjct: 258 QDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLD---FKESGLKADVVLFSSFIDTL 314
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
GL + A S+LDEM G + Y + A+ K
Sbjct: 315 AKNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAFGK 351
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 109/296 (36%), Gaps = 34/296 (11%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P + NA ++ C G + M G+ P+ +F L + G E
Sbjct: 54 LRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDA 113
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL----------------LCLG 319
+ M G + Y++ + K GN+E A++ +L L G
Sbjct: 114 RTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDG 173
Query: 320 GGNMEQSD---------------FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
+E+ D + Y ++ +++ G +A + + +E GI
Sbjct: 174 FSKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKTGKYDEIATV---CEDMENLGI 230
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
D +I+ G D ++ +M A G + + Y + Y K +A
Sbjct: 231 EKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFN 290
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
+ +D SGL+ DV + + I+ + + A SL +M + I +Y TI+
Sbjct: 291 VYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNVVTYNTII 346
>gi|22327132|ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g28460
gi|9502149|gb|AAF88002.1| contains similarity to Pfam family PF01535 (Domain of unknown
function), score=340.5, E=1.9e-98, N=2 [Arabidopsis
thaliana]
gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120 [Arabidopsis thaliana]
gi|27363272|gb|AAO11555.1| At5g28460/F21B23_120 [Arabidopsis thaliana]
gi|332006418|gb|AED93801.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 125/286 (43%), Gaps = 13/286 (4%)
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGL 349
V Y+ LI GY + G LE+A + M++ + T +V G ++ GL
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVV------SRMKEDEIKPNVVTVNTIVGGMCRH---HGL 457
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
++ +E G+ + +I AC ++ +KA ++M GCS +Y
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ C+ R +A ++V + G LD+ Y+ LI + + + + DM +
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+Y T+++ ++ E + ++++ ED ++ + ++I A+C G L++A
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDG-LDPTVTTYGAVIDAYCSVGELDEAL 636
Query: 530 RTLRRM-IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+ + M + + PN Y LIN + + L + E+K K+
Sbjct: 637 KLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD---LKGSYL---T 478
LV+ + ++ DV LI S+ A +F MR R D +K + T
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ GL + R + L + + R +N +I +C+AG+LE AK + RM
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 539 QFEPNDQTYLSLING 553
+ +PN T +++ G
Sbjct: 436 EIKPNVVTVNTIVGG 450
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
SV L ++ +L CK R A ++ D+ + L+ ++AL+ + D
Sbjct: 259 SVWLTRFISSL---CKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMND 315
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRP----ELMAAFLDEVVEDPRV-EVKTHDWNS 514
L M E +I + ++ L ++ R E+ + +D V + + +N+
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375
Query: 515 IIHAFCKAGRLEDAKRTLRRM-IFLQFEPNDQTYLSLINGYVTA 557
+I CK GRL++A+ L RM + + PN TY LI+GY A
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
>gi|297850366|ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
lyrata]
gi|297338906|gb|EFH69323.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
lyrata]
Length = 1490
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 133/293 (45%), Gaps = 25/293 (8%)
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
Y G E+ VEL M + G S +V ++ LI GY +LG ++A + ME
Sbjct: 257 YCQNGKHEEAVELVEEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQ------KMEN 310
Query: 326 SDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC----- 378
+ + T+ ++ G + NG ++ +K+ +G+V + +SAC
Sbjct: 311 FGITADVFTWTAMISGLIHNGMRYQALDMF---RKMFLAGVVPNAVTIMSAVSACSYLKV 367
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
+NLG + HSI +M G + V + Y K + +A ++ + + DV
Sbjct: 368 INLG--SEVHSIAVKM---GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DV 418
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
++++I + A+ LF M++A + ++ T+++G ++N
Sbjct: 419 YTWNSMITGYCQAGYCGKAYELFTRMQDANVRPNIITWNTMISGYIKNGDEGEAMDLFQR 478
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+ +D +V+ T WN II + + G+ +DA R+M F +F PN T LSL+
Sbjct: 479 MEKDGKVQRNTATWNLIIAGYIQNGKKDDALEIFRKMQFSRFMPNSVTILSLL 531
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+++ C N G ++A +++EM G S GL + + Y + + A L+ + + G
Sbjct: 254 LLAYCQN-GKHEEAVELVEEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMENFG 312
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD---------LKGSYLTIMTGLM 484
+ DV + A+I I + A +FR M A + SYL ++
Sbjct: 313 ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSYLKVINLGS 372
Query: 485 ENHRPELMAAFLDEVV---------------EDPRV---EVKTHD---WNSIIHAFCKAG 523
E H + F+D+V+ ED R VK D WNS+I +C+AG
Sbjct: 373 EVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
A RM PN T+ ++I+GY+
Sbjct: 433 YCGKAYELFTRMQDANVRPNIITWNTMISGYI 464
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 8/199 (4%)
Query: 381 LGLSDK-----AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
LGL K A +++EM GC + Y + +CKE R EA ++ ++S GL
Sbjct: 22 LGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLA 81
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME-NHRPELMAA 494
L+ Y+ LI A + Q A ++F DM ++ +++ GL + N E +
Sbjct: 82 LNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGL 141
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ D ++E V T +N++IHAF + G +++A + + M+F +D TY LI
Sbjct: 142 YQDMLLEG--VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 199
Query: 555 VTAEQYFSVLMMWHEIKRK 573
A L ++ ++ K
Sbjct: 200 CRAGNIEKGLALFEDMMSK 218
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 143/341 (41%), Gaps = 15/341 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I+ N + G C VS A +++ M + G PN ++ L + +G E+
Sbjct: 12 PDIFTYNTLILGLCKKGYLVS-ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 70
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M+ G + V Y+ LIS K ++ A G+M + T+
Sbjct: 71 VLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF------GDMSSKGCKPDIFTFNS 124
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G + V + Q + G++ + +I A + G +A ++++M
Sbjct: 125 LIFGLCK---VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 181
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC + Y +KA C+ + L D+ S GL + + + LI + + Q
Sbjct: 182 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 241
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKTHDWNS 514
A RDM + +Y +++ GL + R + D++ VE + T +N+
Sbjct: 242 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAIT--YNT 299
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+I CK G +DA L R + F PN+ T+ L++ ++
Sbjct: 300 LISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFI 340
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 110/515 (21%), Positives = 214/515 (41%), Gaps = 49/515 (9%)
Query: 53 SPTQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAH 112
S + Q TL + T L +L +S N +E+ + L P + LI
Sbjct: 43 SSVSKPQTHTLDFKD-THLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHG 101
Query: 113 LSSLQDNHNLKRAFASVVYVIEKN--PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFK 170
L + + + +A V++++E + P L+ + + T G R AN A+ ++ M K
Sbjct: 102 LFT---SKTIDKAI-QVMHILENHGHPDLIAYNAIIT--GFCR-ANRIDSAYQVLDRM-K 153
Query: 171 NRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDF--------MKPNIYA 222
N+ F P DI N + + C R LD L+F KP +
Sbjct: 154 NKGFSP---------DIVTYN------ILIGSLCSRGMLDSALEFKNQLLKENCKPTVVT 198
Query: 223 CNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESL 281
+E LQ + +A K+++ M + ++P+ ++ + +G ++ ++ S
Sbjct: 199 YTILIEATL--LQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISS 256
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
++ G++ ++ Y+ L+ G + G E+ + + G + + TY ++
Sbjct: 257 ISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG----CEANVVTYSVLISSVC 312
Query: 342 QNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
++G V+ L+ + +K L+P G D +I+A G D A +LD M + GC
Sbjct: 313 RDGKVEEGVGLLKDMKKKGLKPDGYCYDP-----LIAALCKEGRVDLAIEVLDVMISDGC 367
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
+ Y L CK+ R EA + + G + +Y+++ A ++ A
Sbjct: 368 VPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALG 427
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
+ +M + + +Y ++++ L + E + +D +E + +N ++
Sbjct: 428 MILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLG 487
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
CK R+ DA L M+ PN+ TY LI G
Sbjct: 488 LCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEG 522
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 28/144 (19%)
Query: 483 LMENH-RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
++ENH P+L+A +N+II FC+A R++ A + L RM F
Sbjct: 117 ILENHGHPDLIA------------------YNAIITGFCRANRIDSAYQVLDRMKNKGFS 158
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN-LVDAFLYALVKGG 600
P+ TY LI + S L E K ++ + K + L++A L++GG
Sbjct: 159 PDIVTYNILIGSLCSRGMLDSAL----EFKNQLLKENCKPTVVTYTILIEA---TLLQGG 211
Query: 601 FFDAVMQVVEKSQEMKVFVDKWKY 624
D M+++++ E+ + D + Y
Sbjct: 212 -IDEAMKLLDEMLEINLQPDMFTY 234
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 155/405 (38%), Gaps = 69/405 (17%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ + NA L+G C + ++++E M + PN +F L GL E++
Sbjct: 224 EPDVVSYNAVLKGLCMA-KRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVH 282
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI-----------LLCL-----GG 320
E+ + M E G + + Y+++I G K G+L+ A + ++C G
Sbjct: 283 EVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGL 342
Query: 321 GNMEQSDFSKETYCE---------------VVKGFLQNGNVKGLANLIIEAQKLEPSGIV 365
+ E+ + ++E E +V F QNG V + L+ +++ G +
Sbjct: 343 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELL---EQMLVHGCM 399
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
D +I+ GL D+A +L M ACGC Y LK C R +A L
Sbjct: 400 PDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDL 459
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ + G L+ ++ LI + A L + M SY T++ GL +
Sbjct: 460 MSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 519
Query: 486 NHRPELMAAFLDEVV----------------------------------EDPRVEVKTHD 511
+ + L+ +V +D +
Sbjct: 520 AGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVL 579
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+N++I + CK G E A L M+ PN+ TY LI G +
Sbjct: 580 YNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLAS 624
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 137/321 (42%), Gaps = 24/321 (7%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y+++++GY + G LESA R + TY VV+ G + A+ +
Sbjct: 93 YNAMVAGYCRAGQLESARRL-------AAAVPVPPNAYTYFPVVRALCARGRI---ADAL 142
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
++ G + I+ A G A +L++++A GC++ +G L A
Sbjct: 143 AVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAI 202
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C + +A L+ D+ S G + DV +Y+A+++ ++ + L +M
Sbjct: 203 CDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNI 262
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
++ T+++ L N E + L ++ E P + + + +II CK G L+ A
Sbjct: 263 VTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRM----YATIIDGICKEGHLKVAHE 318
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVD 590
L RM +PN Y +L+ G +AE+ W E + ++ K + +
Sbjct: 319 ILNRMPSYGLKPNVVCYNTLLKGLCSAER-------WEETEELLAEMFDKDCPLDDVTFN 371
Query: 591 AFLYALVKGGFFDAVMQVVEK 611
+ + G D V++++E+
Sbjct: 372 ILVDFFCQNGLVDRVIELLEQ 392
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
GL ++ H +L +M GC+ + +Y + CKE A +++ + S GL+ +V Y
Sbjct: 276 GLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCY 335
Query: 442 DALIEASITSQDFQSAFSLFRDM--REARIYDLKGSYLTIMTGLMENHRPELMAAFLDE- 498
+ L++ +++ ++ L +M ++ + D+ ++ ++ +N + + L++
Sbjct: 336 NTLLKGLCSAERWEETEELLAEMFDKDCPLDDV--TFNILVDFFCQNGLVDRVIELLEQM 393
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+V +V T + ++I+ FCK G +++A L+ M +PN +Y ++ G +AE
Sbjct: 394 LVHGCMPDVIT--YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAE 451
Query: 559 QYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
+ W + + +S Q+G + + L K G + ++++++
Sbjct: 452 R-------WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 497
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 8/217 (3%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN + L+G C + V DAE ++ M G N +F L KGL E+ +
Sbjct: 434 KPNTISYTIVLKGLCSAERWV-DAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
EL M G S ++ YS++I G K G + A + + + G + Y +
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII----YSSI 548
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ G + + + ++ + I D + +IS+ G +++A L M +
Sbjct: 549 ASALSREGRINKVIQMF---DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVS 605
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
GC Y ++ E EA +++ ++ S G
Sbjct: 606 SGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 149/361 (41%), Gaps = 30/361 (8%)
Query: 221 YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
Y A + C +++ A ++ M GV+ + + L Y ++ VE+++
Sbjct: 199 YVYTAGIRAYCES-RNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKN 257
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLGG-----------GNMEQSD 327
+M G ++ V Y +L+ G+ ++ LE A R ++ LG + + +
Sbjct: 258 VMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKE 317
Query: 328 FSKETYCEVVK----GFLQNG-NVKGLANLIIEAQKLEPSGIVVDRSVGFGI-------- 374
+E + K G + N L + + + ++ + + + G G+
Sbjct: 318 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377
Query: 375 --ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
I A G+ + A + D+M G V + Y + YCK+ A L+ +
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GL +Y LI + D SA L R+M E I ++ ++ G ++ + +
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
A D+++ D V +N +I +C G + A + +M+ + +P++ TY SLI+
Sbjct: 498 ARLFDKMI-DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 556
Query: 553 G 553
G
Sbjct: 557 G 557
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 8/197 (4%)
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
K+ EA L + G+ +V Y+ALI+ ++ F A LF++M + +
Sbjct: 315 KKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV 374
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+Y ++ L + E D++ D ++V + +NS+I+ +CK G L+ A+ L
Sbjct: 375 TYAILIHALCKRGMIEDALCLFDKM-RDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSG 433
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLY 594
M+ P +Y LI G S + E+ R+++ ++GI + + A +
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSSAM----ELHREMA---ERGIAWNNYTFTALIN 486
Query: 595 ALVKGGFFDAVMQVVEK 611
K D ++ +K
Sbjct: 487 GFCKDKKMDEAARLFDK 503
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 103/276 (37%), Gaps = 41/276 (14%)
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
SGI V++ I+ + V + A + D+M G + VY ++AYC+
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A LV+ + S G++ Y+ L+ + Q A + M + + +Y T++
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276
Query: 482 GLMENHRPELM-------------------AAFLDEVVEDPRVE------VKTHD----- 511
G E+ + +DE+ + VE K D
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336
Query: 512 ----WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N++I CK R +DA R + M EPN+ TY LI+ L ++
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFD 603
+++ KGIK ++ + K G D
Sbjct: 397 DKMR-------DKGIKVTVYPYNSLINGYCKQGSLD 425
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 141/375 (37%), Gaps = 50/375 (13%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N Y A + G C + + +A ++ + M V PNE +F + Y L G K +L
Sbjct: 477 NNYTFTALINGFCKD-KKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE------- 331
M E G Y SLISG LCL G + ++F +
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISG---------------LCLTSGVSKANEFVADLENSYAV 580
Query: 332 ----TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
+ ++ G + G +L E + G+ +D I+ A + +K+
Sbjct: 581 LNNFSLTALLYGLFREGRFTETYHLWDE---MAVRGVKLDLVSFTIIVYAALKQHDKEKS 637
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA----TQLVMDISSSGLQLDVGNYDA 443
+ EM G Y + A KE +A Q+V+D G + +
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVID----GYSPNTVTHTV 693
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT-----GLMENHRPELMAAFLDE 498
LI S SA L ++M + K +Y + G ME + +L +A L
Sbjct: 694 LINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAK-DLHSAMLQG 752
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+ +N +I CKAG++++A +R++ F P+ +Y ++I+
Sbjct: 753 HL------ASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMG 806
Query: 559 QYFSVLMMWHEIKRK 573
+W+E+ K
Sbjct: 807 DINKAFELWNEMLYK 821
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/345 (19%), Positives = 145/345 (42%), Gaps = 38/345 (11%)
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
L+ +G + +M + G +VFY++++ + ++ N++ A R+I + +E
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLA-RSIFSEMLEKGLE 516
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGF---------- 372
++F TY ++ GF +N + + ++I + A E + ++ + +
Sbjct: 517 PNNF---TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA 573
Query: 373 ---------------------GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
II V +G +D A EM+ G S + + +
Sbjct: 574 KEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLIN 633
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
+CK +R A ++ ++ S L+LD+ Y ALI+ D ++A++LF ++ E +
Sbjct: 634 GFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMP 693
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
Y ++++G + + ++V D + + ++I K G + A
Sbjct: 694 NVSVYNSLISGFRNLGKMDAAIDLYKKMVND-GISCDLFTYTTMIDGLLKDGNINLASDL 752
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
++ L P++ ++ L+NG Q+ M E+K+K T
Sbjct: 753 YSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVT 797
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 149/383 (38%), Gaps = 48/383 (12%)
Query: 192 SNFVAFLKV--FEECCRIALDENLDFMKP-NIYACNAALEGCCYGLQSVSDAEKVIETMS 248
S VAF+K EE R+ +DE + F P ++ A + + G C G + A + M
Sbjct: 315 SVIVAFVKEGNMEEAVRV-MDEMVGFGIPMSVIAATSLVNGYCKG-NELGKALDLFNRME 372
Query: 249 VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLE 308
G+ P++ F + + EK +E M + V ++I G +K + E
Sbjct: 373 EEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPE 432
Query: 309 SASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR 368
+A +E + S E++ + GF+ N
Sbjct: 433 AA------------LEIFNDSFESW--IAHGFMCNK------------------------ 454
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
I G D A S L M G + Y + A+C+ A + +
Sbjct: 455 -----IFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSE 509
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ GL+ + Y LI+ ++D Q+A+ + M + + Y TI+ GL + +
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQ 569
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
L ++++ R + +NSII F K G + A T R M PN T+
Sbjct: 570 TSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 549 SLINGYVTAEQYFSVLMMWHEIK 571
SLING+ + + L M HE+K
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMK 652
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 20/243 (8%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G+ + +I A V G ++A ++DEM G + + + YCK + +A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
L + GL D + ++E + + + A + M+ RI T++ G
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDW--NSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
++ PE AA E+ D H + N I FCK G+++ A L+ M
Sbjct: 425 CLKAESPE--AAL--EIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGI 480
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG-QKGIKFEHNLVDAFLYALVKG 599
EPN Y +++ + + ++ R I ++ +KG++ + F Y+++
Sbjct: 481 EPNVVFYNNMMLAHCRMKNM--------DLARSIFSEMLEKGLE-----PNNFTYSILID 527
Query: 600 GFF 602
GFF
Sbjct: 528 GFF 530
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 103/242 (42%), Gaps = 8/242 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ + + G C + A ++ M + ++ + ++G L + K +
Sbjct: 623 PNVVTFTSLINGFCKS-NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYT 681
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L S + E G + Y+SLISG+ LG +++A + G + F TY ++
Sbjct: 682 LFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG-ISCDLF---TYTTMI 737
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G L++GN+ ++L E L GIV D + +++ G KA +L+EM
Sbjct: 738 DGLLKDGNINLASDLYSELLDL---GIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK 794
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
+ + +Y + + +E EA +L ++ G+ D ++ L+ + S
Sbjct: 795 DVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASK 854
Query: 458 FS 459
S
Sbjct: 855 IS 856
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 142/338 (42%), Gaps = 16/338 (4%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D M P+++A N L G C ++ + DA K+ + M + PN ++ L Y G E
Sbjct: 186 DGMGPSVFAYNLVLGGLCK-VRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIE 244
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ + + M E +V Y+SL++G G ++ A R +LL ME S F +
Sbjct: 245 EALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDA-REVLL-----EMEGSGFLPGGF 298
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
V F + N G L + I +D +++ +G +KA +L +
Sbjct: 299 LSFV--FDDHSNGAGDDGL------FDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAK 350
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
+ G + Y + AYC+E +A + GL+ + ++ +I + +
Sbjct: 351 LVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGE 410
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A + R M E + +Y +++ G + FLDE ++ ++ +
Sbjct: 411 VDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDE-MDKAGIKPNVISYG 469
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
S+I+ CK +L DA+ L MI PN + Y LI
Sbjct: 470 SLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLI 507
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 123/650 (18%), Positives = 237/650 (36%), Gaps = 104/650 (16%)
Query: 16 FFCSSSSTSPETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQQTL----------TQ 65
+ CS S E LYS ++ F +S+ + + ++TL T+
Sbjct: 95 WLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTR 154
Query: 66 DNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRA 125
+ + + +++ + D+ ++ KS+ + + PS N ++ L ++ + ++
Sbjct: 155 PDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKL 214
Query: 126 FASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFAL--------VKCMFKNRYFMPF 177
F + I++N + + T +TL+ A V+C +
Sbjct: 215 FDEM---IQRN-MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLN 270
Query: 178 ELWGGFLVDICRK------NSNFV--AFLK-VFEECCRIALDENL---DFMKPNIYACNA 225
L G VD R+ S F+ FL VF++ A D+ L ++ +
Sbjct: 271 GLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCI 330
Query: 226 ALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF 285
L G C + + AE+V+ + GV P++ S+ L Y +G +K + M E
Sbjct: 331 LLNGLCR-VGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEER 389
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
G + ++++IS + + G ++ A + + G + ETY ++ G+ Q G+
Sbjct: 390 GLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKG----VSPTVETYNSLINGYGQKGH 445
Query: 346 V----------------------KGLANLIIEAQKLEPSGIVVDRSVGFGI--------- 374
L N + + +KL + IV+ +G G+
Sbjct: 446 FVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNM 505
Query: 375 -ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
I A +L A DEM G L Y + + R +A L + ++ G
Sbjct: 506 LIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKG 565
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-------MEN 486
DV Y++LI S + Q L+ M+ I G++ ++ M+
Sbjct: 566 CNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDK 625
Query: 487 HRPELM--------------------------AAFLDEVVEDPRVEVKTHDWNSIIHAFC 520
E++ A L + + D V+ +NS+I A+
Sbjct: 626 MFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYL 685
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+ R+ + K + M P TY LI G + + + E+
Sbjct: 686 RDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREM 735
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY-ALKGLQEK 274
+KPN+ + + + C + + DAE V+ M GV PN + L +L L++
Sbjct: 461 IKPNVISYGSLINCLCKD-RKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDA 519
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+ ++ G + +V Y++LI+G + G ++ A L G G + TY
Sbjct: 520 FRFFDEMIQS-GIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKG----CNPDVITYN 574
Query: 335 EVVKGFLQNGNVK-------------------------------GLANLIIEAQKLEPSG 363
++ G+ ++ N + G+ + Q++
Sbjct: 575 SLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMD 634
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+V D+ V +I + G KA S+ +M G Y + AY ++ R +E
Sbjct: 635 LVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIK 694
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
LV D+ + GL V Y+ LI+ +DF A+ +R+M E
Sbjct: 695 HLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVE 737
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 140/344 (40%), Gaps = 32/344 (9%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V + +++ M + G +E F + +Y GL E+ VE+ + EFG + Y+
Sbjct: 92 VDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNH 151
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
+ L L +R ++ + +M++ F TY ++K +N V G L++
Sbjct: 152 V------LDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLV 205
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
E + G D +IS+ +GL + + + + VY + C
Sbjct: 206 E---MSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPV-----VSVYNALINGLC 257
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE----ARIY 470
KEH A +L+ ++ G+ +V +Y LI S + AFS M + IY
Sbjct: 258 KEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY 317
Query: 471 DL----KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
L KG +L T + +++ F ++ +N+++ FC G +
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQMIRGF--------GLQPNVVAYNTLVQGFCSHGNIV 369
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
A M + PN +TY SLING+ + +W+++
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 130/342 (38%), Gaps = 13/342 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PNIY ++ ++GC + + + + G++PN ++ L + G K V
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVS 373
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ S M E G S + Y SLI+G+ K G+L+ A L G + Y +V
Sbjct: 374 VFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP----NVVVYTNMV 429
Query: 338 KGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM- 394
+ ++ K +L I+ + PS + I + G D A + +M
Sbjct: 430 EALCRHSKFKEAESLIEIMSKENCAPSVPTFN-----AFIKGLCDAGRLDWAEKVFRQME 484
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
C + Y L K +R EA L +I G++ Y+ L+ S +
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP 544
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-EVKTHDWN 513
A L M + + I+ + + E A LD V R +
Sbjct: 545 GIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYT 604
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++I C++ ED L RMI P+ T+ LIN ++
Sbjct: 605 NVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 143/382 (37%), Gaps = 45/382 (11%)
Query: 210 DENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL------- 262
D D +PN++ N L+ C V A+K++ MS G P+ S+ +
Sbjct: 171 DMKRDGFEPNVFTYNVLLKALCKN-NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV 229
Query: 263 ------------------AYLYALKGLQEK-----IVELESLMNEFGFSSQMVFYSSLIS 299
Y + GL ++ EL M E G S ++ YS+LI+
Sbjct: 230 GLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLIN 289
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNG---NVKGLANLIIEA 356
G +E A + L G + T +VKG G + L N +I
Sbjct: 290 VLCNSGQIELAFSFLTQMLKRG----CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 357 QKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
L+P+ + + V GF + G KA S+ M GCS + Y + + K
Sbjct: 346 FGLQPNVVAYNTLVQGF------CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK 399
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
A + + +SG +V Y ++EA F+ A SL M + +
Sbjct: 400 RGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPT 459
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
+ + GL + R + ++ + R +N ++ KA R+E+A R +
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Query: 536 IFLQFEPNDQTYLSLINGYVTA 557
E + TY +L++G A
Sbjct: 520 FMRGVEWSSSTYNTLLHGSCNA 541
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 19/233 (8%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
T+ +++ +G V + L+ Q+++ G + +IS +GL+++A +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLL---QQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMF 134
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+ GC + +Y L E+R + D+ G + +V Y+ L++A +
Sbjct: 135 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMT-----GLMENHRPELMAAFLDEVVEDPRVE 506
A L +M SY T+++ GL++ R EL F +P V
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR-ELAERF------EPVVS 247
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
V +N++I+ CK + A +R M+ PN +Y +LIN + Q
Sbjct: 248 V----YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ 296
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 35/192 (18%), Positives = 74/192 (38%), Gaps = 6/192 (3%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G D +L +M G +++ + Y + A ++ I G V Y
Sbjct: 90 GQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIY 149
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ +++ + Q + ++RDM+ +Y ++ L +N++ + L E+
Sbjct: 150 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM-S 208
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
+ + ++I + C+ G +++ + R FEP Y +LING Y
Sbjct: 209 NKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNALINGLCKEHDYK 263
Query: 562 SVLMMWHEIKRK 573
+ E+ K
Sbjct: 264 GAFELMREMVEK 275
>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 811
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 173/416 (41%), Gaps = 67/416 (16%)
Query: 205 CRIALDENLDF--------MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
C+ + + LDF + I +CN L+G + + A +++ + G PN
Sbjct: 229 CKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG--LSVDQIEVASRLLSLVLDCGPAPNV 286
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA------ 310
+F L + +G ++ +L +M + G ++ YS+LI GY K G L
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 311 -------------SRTILLCLGGGNMEQSDFSKE------------TYCEVVKGFLQNGN 345
S TI + + G++ + + TY ++KG Q+G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 346 VK---GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
+ G+ I++ + +EPS +V S C NL ++ ++M G
Sbjct: 407 IYEAFGMYGQILK-RGMEPS--IVTYSSLIDGFCKCGNL---RSGFALYEDMIKMGYPPD 460
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+ +Y + K+ A + + + ++L+V +++LI+ F A +FR
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 463 DMREARIYDLK---GSYLTIM-TGLMEN----HRPELMAAFLDEVVEDPRVEVKTHDWNS 514
M IY +K ++ T+M +ME+ H + L ++++ ++ N
Sbjct: 521 LM---GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 577
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT------AEQYFSVL 564
+IH K R+EDA + +I + EP+ TY ++I GY + AE+ F +L
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 633
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 138/347 (39%), Gaps = 47/347 (13%)
Query: 251 GVRPNE-SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G+ P+ S+ GF+ KG K ++ L+ E GF +V + ++ G + + +E
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEV 269
Query: 310 ASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEPS----- 362
ASR + L L G T+C ++ GF + G + +L ++E + +EP
Sbjct: 270 ASRLLSLVLDCGPAPNV----VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 363 -------------------------GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G+ +D V I V G A + M
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G S + Y +K C++ R EA + I G++ + Y +LI+ + +S
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMEN----HRPELMAAFLDEVVEDPRVEVKTHDWN 513
F+L+ DM + Y ++ GL + H L + + R+ V +N
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI---RLNVVV--FN 500
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
S+I +C+ R ++A + R M +P+ T+ +++ + + +
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAF 547
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 126/340 (37%), Gaps = 60/340 (17%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF-----------GFLAY 264
++ N+ N+ ++G C L +A KV M + G++P+ ++F F +
Sbjct: 492 IRLNVVVFNSLIDGWCR-LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKH 550
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
+ GLQ L LM S+ + + +I K +E AS+
Sbjct: 551 MKPTIGLQ-----LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK------------ 593
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
F N +IE K+EP + + +I +L
Sbjct: 594 ---------------FFNN---------LIEG-KMEPDIVTYNT-----MICGYCSLRRL 623
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A I + + + CK + A ++ ++ G + + Y L
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 683
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
++ S D + +F LF +M+E I SY I+ GL + R + + + D +
Sbjct: 684 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-DAK 742
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
+ + +I +CK GRL +A M+ +P+D
Sbjct: 743 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 782
>gi|255661006|gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 376
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 141/336 (41%), Gaps = 13/336 (3%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ AE+V + + V P+ + + + G + EL +M G S + ++
Sbjct: 6 IDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELWEMMGREG-SRSVASFNI 64
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV-KGLANLIIE 355
++ G +E A L G +E S TY +V GF +NG + K L L I
Sbjct: 65 MMRGLFDNRKVEEAMSIWELMTKSGFVEDS----VTYGILVHGFCKNGYINKSLHILEIA 120
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
QK G V+D +I+A +KA S+L+ M GC VY +K
Sbjct: 121 EQK----GGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIG 176
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
+ +A ++ ++ ++ ++ Y LI+ + F A+ L ++M E + +
Sbjct: 177 ASKRDDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVIT 236
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
Y +M GL H+ E+ ++V + + +V+ H N +IH C G+ + A
Sbjct: 237 YSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMH--NILIHGLCSVGKTQLALSLYLD 294
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
M PN T +L+ G+ + L++W I
Sbjct: 295 MNRWNCAPNLVTQNTLMEGFYKDGNVRNALVIWARI 330
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 166/415 (40%), Gaps = 58/415 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+++ N + G C Q + A V + +S GV P+ +++ L Y +G K+
Sbjct: 184 VSPDLFTFNIVISGFCKTGQ-LRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKM 242
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
+++L+ E G S +V ++ LI+GY K N+ +A + M Q
Sbjct: 243 YHVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVF------QEMRQQGIPANV 296
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY +V G + G V+ L+ E ++L GL+ I
Sbjct: 297 VTYNSLVSGLCREGKVEDSIKLVEEMEEL----------------------GLA----CI 330
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L MN+ L +CK+ EA V I+ G++ +V Y+ L++
Sbjct: 331 LSTMNS------------VLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRR 378
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ A + M I +Y ++TG + ++ LDE+ E V+
Sbjct: 379 LGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEK-GVKADVV 437
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+N +I A C G + A + L M+ + EP Y ++ING+ HEI
Sbjct: 438 TYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGA----HEI 493
Query: 571 KRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYK 625
+ ++ ++ +N+ FL K G D V+ + E + ++ Y+
Sbjct: 494 RLRMEKRKKRANVVTYNV---FLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYE 545
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 128/299 (42%), Gaps = 21/299 (7%)
Query: 190 KNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
K N A +KVF+E + + N + N+ + G C V D+ K++E M
Sbjct: 273 KEPNITAAIKVFQEMRQQGIPAN-------VVTYNSLVSGLCRE-GKVEDSIKLVEEMEE 324
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMN---EFGFSSQMVFYSSLISGYVKLGN 306
LG+ S+ + + KG+ +VE E ++ + G ++ Y++L+ GY +LG
Sbjct: 325 LGLACILSTMNSVLNGFCKKGM---MVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGK 381
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
++ A+ G G +TY ++ GF + + + ++ L+ E ++ VV
Sbjct: 382 MKEAAAAKDAMAGKGISPNV----KTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVV 437
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+V +I A G KA +LDEM G Y + +C++ A ++
Sbjct: 438 TYNV---LIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIR 494
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ + + +V Y+ ++ A + +M E + + +Y I +G++E
Sbjct: 495 LRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIE 553
>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
Length = 671
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 161/395 (40%), Gaps = 45/395 (11%)
Query: 192 SNFVAFLKVFEECCRIA-LDENLDFMK-----PNIYACNAALEGCCYGLQSVSDAEKVIE 245
+N V + + + CR L + L + P+ Y N L+G C Q AE+++
Sbjct: 182 ANVVTYTALIDGYCRSGRLADALRLIASMPVAPDTYTYNTVLKGLCCAKQ-WEQAEELMR 240
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M PNE +F + GL ++ VEL M ++G + ++ YS+L++G+ + G
Sbjct: 241 EMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHG 300
Query: 306 NLESASR---TIL--------------LCLGGGNMEQSDFSKE-----------TYCEVV 337
++ A + T+L LC+ G E + E T+ ++
Sbjct: 301 RVDEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLI 360
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
QN V+ ++ + QK G + D IIS + +D A +L M
Sbjct: 361 NSLCQNRLVEYAVEVLEQMQKY---GYMPDVVSYNTIISCFSDQARADDALKLLKSML-- 415
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
C + LK CK R +A +LV + +++ ++ LI++ + + A
Sbjct: 416 -CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDA 474
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+F M + R +Y +++ G E E+ AF ++ +N+ +
Sbjct: 475 IEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEM--AF--DLFRSMPCRADIFSYNATLK 530
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
C A R +DA + M+ PN+ T+ LI+
Sbjct: 531 GLCMAARWDDAGELIADMVTEDCLPNEVTFNILIS 565
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 144/365 (39%), Gaps = 41/365 (11%)
Query: 212 NLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL 271
N +PN NAAL+G C + E + E M PN+++F L L
Sbjct: 310 NTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAE-MVRKDCPPNDATFSTLINSLCQNRL 368
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR---------------TILL 316
E VE+ M ++G+ +V Y+++IS + + A + +L
Sbjct: 369 VEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLK 428
Query: 317 CLGG-----------GNMEQSD--FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
CL M + D ++ T+ ++ QNG VK IE +L P
Sbjct: 429 CLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKD----AIEVFELMPKY 484
Query: 364 IVVDRSVGF-GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
+ V + +I+ GL + A + M C + Y TLK C R +A
Sbjct: 485 RCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDA 541
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+L+ D+ + + ++ LI + A ++ M + I +Y ++ G
Sbjct: 542 GELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALING 601
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
E R + FL + +P T +NSI+ C+A R +DA++ + M+ P
Sbjct: 602 YSEQGRLDDALKFLSTMPCEP----DTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTP 657
Query: 543 NDQTY 547
N+ T+
Sbjct: 658 NEVTF 662
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 63/335 (18%), Positives = 122/335 (36%), Gaps = 87/335 (25%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P + +CN ++ C + ++DAE+V+E + G
Sbjct: 114 PAVISCNILIKKLC-ARRRLADAERVLEALKASG-------------------------- 146
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
++ V +++L++GY + G+L A R + G TY ++
Sbjct: 147 ----------AADAVSHNTLVAGYCRDGSLGDAERVVEAARASGTANVV-----TYTALI 191
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G+ ++G + L I + + P + +V G+ A ++A ++ EM
Sbjct: 192 DGYCRSGRLADALRL-IASMPVAPDTYTYN-TVLKGLCCA----KQWEQAEELMREMIRN 245
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
C + ++A+C+ A +L+ + G DV +I
Sbjct: 246 SCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDV-----II------------ 288
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
Y T++ G E+ R + L+ ++ P T +N+ +
Sbjct: 289 ------------------YSTLVNGFSEHGRVDEALKLLNTMLCRP----NTVCYNAALK 326
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
C AGR E+ + M+ PND T+ +LIN
Sbjct: 327 GLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLIN 361
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 162/420 (38%), Gaps = 67/420 (15%)
Query: 195 VAFLKVFEECCRIAL-DENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIE 245
V + ++ C +L +E +DF+ PN+ L GC Q + ++++
Sbjct: 300 VIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQ-LGRCKRILS 358
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV--- 302
M G P+ F L + Y G +L M + G V Y+ LI G
Sbjct: 359 MMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE 418
Query: 303 ---KLGNLESASRT------------------ILLCLGGGNMEQSDFS------------ 329
L LE A + + CL G + +S
Sbjct: 419 KLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP 478
Query: 330 -KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY +V+ G L N + A L+ E K + +V D +I + +GL +A
Sbjct: 479 DTSTYSKVI-GLLCNASKVDNAFLLFEEMK--SNHVVPDVFTYTILIDSFCKVGLLQQAR 535
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
DEM GC+ + Y + AY K + + A +L + S G +V Y ALI+
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595
Query: 449 ITSQDFQSAFSLFRDMR-EARIYDLKG---------------SYLTIMTGLMENHRPELM 492
S + A ++ MR A I D+ +Y ++ GL + H+ +
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
LD V+ E ++++I FCK G+L++A+ +M + PN TY SLI+
Sbjct: 656 RDLLD-VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 120/311 (38%), Gaps = 46/311 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PNI+ A ++G C V +A +++ MSV G PN + L + G ++
Sbjct: 634 PNIFTYGALVDGLCKA-HKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ + M+E G+ + YSSLI K L+ A + V+
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK-----------------------VL 729
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
L+N N+II + +I +G +D+A+ ++ M
Sbjct: 730 SRMLENSCA---PNVIIYTE----------------MIDGLCKVGKTDEAYRLMSMMEEK 770
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC + Y + + K + + +L+ + + G + Y LI + A
Sbjct: 771 GCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDA 830
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
L +M++ Y ++ G N + LDE+ E+ V + + +I
Sbjct: 831 HQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPI-IPAYRILID 887
Query: 518 AFCKAGRLEDA 528
+FCKAGRLE A
Sbjct: 888 SFCKAGRLELA 898
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 103/492 (20%), Positives = 188/492 (38%), Gaps = 62/492 (12%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIE 134
+H + + A+K K + P V N LI + N K V+ + E
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICG-----NEKLPSLDVLELAE 430
Query: 135 KN-PKLLDFQTVHTLLGSMRNANTA---------APAFALVKCMFKNRYFMPFELWGGFL 184
K ++LD H +L + +N A A+++++ M + + +
Sbjct: 431 KAYGEMLD---AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI 487
Query: 185 VDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCC-YGLQSVSDAEKV 243
+C + AFL +FEE + + P+++ ++ C GL + A K
Sbjct: 488 GLLCNASKVDNAFL-LFEE-------MKSNHVVPDVFTYTILIDSFCKVGL--LQQARKW 537
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+ M G PN ++ L + Y EL +M G +V Y++LI G+ K
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV---KGLANLIIEAQKLE 360
G +E A + G ++ D Y ++ G +++ N+ L + + +A K++
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDM----YFKIDDGNIRDPNIFTYGALVDGLCKAHKVK 653
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
+A +LD M+ GC VY + +CK +
Sbjct: 654 -------------------------EARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLD 688
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
EA + +S G +V Y +LI+ + A + M E Y ++
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL + + + A L ++E+ + ++I F KAG+++ +R+M
Sbjct: 749 DGLCKVGKTD-EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807
Query: 541 EPNDQTYLSLIN 552
PN TY LIN
Sbjct: 808 APNFVTYRVLIN 819
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 114/294 (38%), Gaps = 24/294 (8%)
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
E +L+ + F V Y+ +ISG + E A + M S TY
Sbjct: 285 EALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFL------SRMRSSSCIPNVVTYR 338
Query: 335 EVVKGFL---QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ G L Q G K + +++I G R + +I A G A+ +L
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMI------TEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG------NYDALI 445
+M CGC G VY + C + L + + G LD N L
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ F+ A+S+ R+M +Y ++ GL+ N A L E ++ V
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI-GLLCNASKVDNAFLLFEEMKSNHV 511
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ +I +FCK G L+ A++ M+ PN TY +LI+ Y+ A +
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 131/341 (38%), Gaps = 45/341 (13%)
Query: 276 VELESL--MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
V LE L + + G+ + Y++L+ +++ L++A + E SD
Sbjct: 215 VALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLV--------HREMSD------ 260
Query: 334 CEVVKGFLQNGNVKG-LANLIIEAQK-------LEPSGIVVDRSVGFGIISACVNLGLSD 385
GF +G G +L+ +A + +E +D + +IS L +
Sbjct: 261 ----SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFE 316
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A L M + C + Y L ++ + +++ + + G +++LI
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVE--- 501
A S D+ A+ L + M + Y ++ G+ N + P L L E
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEM 436
Query: 502 -DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
D V + + +++ C AG+ E A +R M+ F P+ TY +I A +
Sbjct: 437 LDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKV 496
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
+ +++ E+K H + D F Y ++ F
Sbjct: 497 DNAFLLFEEMKSN------------HVVPDVFTYTILIDSF 525
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 173/397 (43%), Gaps = 43/397 (10%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + P I N + G C + ++ E + G P+ ++ L G E
Sbjct: 31 DGVAPTIVTYNTIINGLCKS-NDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLE 89
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA----------SRTILLCLGGGNM 323
+ L M+ G +V YS LI+G K+G ++ A S +L + N
Sbjct: 90 EARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNS 149
Query: 324 EQSDFSKETY----CEVVKGFLQNGNVK---------GLANLIIEAQKLEPSGIVVDRSV 370
K++ CE+++ L++G+++ L + + + +++ + V D +
Sbjct: 150 FLDGLCKQSMTAEACELMRS-LRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI 208
Query: 371 GFGII------SACVNLGLS-----DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
G + +A VN GL ++AH++++ M G + + Y + A+CK R
Sbjct: 209 AGGYVPNVITYNALVN-GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 267
Query: 420 AEATQLVMDISSSG-----LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
EA +L+ ++S G L D ++ LI + + +F+ A +LF +M +
Sbjct: 268 DEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVM 327
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
++ ++ GL + + E LD ++ + V +N+++H CK+GR+E+A + L
Sbjct: 328 TFGALIDGLCKAGQVEAARDILD-LMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 386
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
M+ P+ TY SL+ A + L + E+K
Sbjct: 387 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 161/383 (42%), Gaps = 35/383 (9%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMS--VLGVRPNESS 258
EE R+ D + PN+ + + G C + + +A ++I+ M+ V PN
Sbjct: 88 LEEARRLHGDMSSRGCVPNVVTYSVLINGLCK-VGRIDEARELIQEMTRKSCDVLPN--- 143
Query: 259 FGFLAYLYALKGL--QEKIVELESLM-----NEFGFSSQMVFYSSLISGYVKLGNLESAS 311
+ Y L GL Q E LM S V +S+LI G K G ++ A
Sbjct: 144 --IITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC 201
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
+ GG + TY +V G + ++ A+ +IE+ + G+ D
Sbjct: 202 SVFDDMIAGGYVPNV----ITYNALVNGLCKADKME-RAHAMIES--MVDKGVTPDVITY 254
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT-------LKAYCKEHRTAEATQ 424
++ A D+A +L M + GC+ V VP + CK +A+
Sbjct: 255 SVLVDAFCKASRVDEALELLHGMASRGCTPN--VLVPDKVTFNILIAGACKAGNFEQASA 312
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L ++ + LQ DV + ALI+ + ++A + M + +Y ++ GL
Sbjct: 313 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 372
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
++ R E FL+E+V V + + S+++A C+A R +DA + + + ++P+
Sbjct: 373 KSGRIEEACQFLEEMVSSGCVP-DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDT 431
Query: 545 QTYLSLINGY---VTAEQYFSVL 564
TY L++G EQ +VL
Sbjct: 432 VTYNILVDGLWKSGKTEQAITVL 454
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 146/341 (42%), Gaps = 20/341 (5%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
+E C + D PN+ NA + G C + A +IE+M GV P+ ++
Sbjct: 197 IDEACSVFDDMIAGGYVPNVITYNALVNGLCKA-DKMERAHAMIESMVDKGVTPDVITYS 255
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQM-----VFYSSLISGYVKLGNLESASRTIL 315
L + ++ +EL M G + + V ++ LI+G K GN E AS +
Sbjct: 256 VLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQAS-ALF 314
Query: 316 LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE-PSGIVVDRSVGFGI 374
+ N+ Q D T+ ++ G + G V+ +++ L P +V ++ G+
Sbjct: 315 EEMVAKNL-QPDVM--TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGL 371
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
+ G ++A L+EM + GC Y + A C+ RT +A QLV ++ S G
Sbjct: 372 CKS----GRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGW 427
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
D Y+ L++ S + A ++ +M ++ +GL HR +A
Sbjct: 428 DPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGL---HRSGNLAG 484
Query: 495 FLD--EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
++ VV + +SI+ C++G+L+D K ++
Sbjct: 485 TMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIK 525
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Query: 438 VGNYDALIEASITSQDFQSAFSLFR-DMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
V +Y+ ++++ + D A +FR +M + +Y TI+ GL +++
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 497 DEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+E+VE P V +N++I + CKAG LE+A+R M PN TY LING
Sbjct: 61 EELVERGHHPDVVT----YNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLING 116
Query: 554 YVTAEQYFSVLMMWHEIKRK 573
+ + E+ RK
Sbjct: 117 LCKVGRIDEARELIQEMTRK 136
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 99/491 (20%), Positives = 198/491 (40%), Gaps = 28/491 (5%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKN--PKLLDFQ 143
EA + F + A P N++I S + A+ + + E+ P ++ F
Sbjct: 168 EAEELFAQMEAERSVPCAYAYNTMIMGYGS---AGRFEDAYKLLERLRERGCIPSVVSFN 224
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
++ T LG R + A F ++K + P ++D+ + EE
Sbjct: 225 SILTCLGKKRKVDEALSLFEVMK-----KDAEPNSSTYNIIIDM-------LCLGGRVEE 272
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
RI + + PN+ N ++ C + + +A K+ E+ S G P+ ++ L
Sbjct: 273 AYRILDEMEHASLFPNLLTVNIMVDRLCKA-RKLEEAYKIFESASQRGCNPDCVTYCSLI 331
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
KG ++ L M + G ++ V Y+SLI + G E + + G
Sbjct: 332 DGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGC- 390
Query: 324 EQSDFSK-ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
+ D + TY + V + G V+ +I E + G + D +I G
Sbjct: 391 -KPDLTLLNTYMDCV---FKAGEVEK-GRMIFE--DIRSYGFLPDVRSYSILIHGLTKAG 443
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+ + +I M G ++ Y + +CK + +A +++ ++ +Q V Y
Sbjct: 444 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 503
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
A+++ A+ LF + + I Y +++ G + R + L+E+++
Sbjct: 504 AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 563
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+ + WNS++ A KA + +A + M ++ PN TY LING ++Y
Sbjct: 564 G-LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNK 622
Query: 563 VLMMWHEIKRK 573
+ W +++++
Sbjct: 623 AFVFWQDMQKQ 633
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 341 LQNGNVKGLANLIIEAQKLEPS--GIVVDRSVGFG--------IISACVNLGLSDKAHSI 390
L N LA ++ A++L+ + + V R + F +I A ++A +
Sbjct: 8 LPNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALEL 67
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
L +M G VG+ ++ ++A +E + A+A LV ++ S L+ D+ Y+ I+
Sbjct: 68 LRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGK 127
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR----PELMAAFLDEVVEDPRVE 506
+ + A F +++ + SY +++ L + R EL A +E R
Sbjct: 128 AGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQ-----MEAERSV 182
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
+ +N++I + AGR EDA + L R+
Sbjct: 183 PCAYAYNTMIMGYGSAGRFEDAYKLLERL 211
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 118/303 (38%), Gaps = 21/303 (6%)
Query: 247 MSVLGVR-PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
M+VLG PN++ A L + L + ++ + ++M F Y+ LI +
Sbjct: 1 MAVLGYGLPNQACADLAAALVRARRLDDAVLAV-AVMRRLKFRPAFSAYTVLIGALAEAR 59
Query: 306 NLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQK--LEP 361
E A + M++ + + +V+ + G V L+ E + LEP
Sbjct: 60 RPERALELLR------QMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEP 113
Query: 362 SGIVVDRSVG-FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
++ + + FG G D A E+ A G Y + CK R
Sbjct: 114 DIVLYNVCIDCFG------KAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLG 167
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
EA +L + + Y+ +I ++ F+ A+ L +RE S+ +I+
Sbjct: 168 EAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSIL 227
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
T L + + + + + + +D E + +N II C GR+E+A R L M
Sbjct: 228 TCLGKKRKVDEALSLFEVMKKD--AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASL 285
Query: 541 EPN 543
PN
Sbjct: 286 FPN 288
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 81/410 (19%), Positives = 154/410 (37%), Gaps = 32/410 (7%)
Query: 80 LTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL 139
L +EA++ + SLFP+ N ++ L + + F S NP
Sbjct: 266 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR-GCNP-- 322
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRY----FMPFELWGGFLVDICRKNSNFV 195
D T +L+ + A+ L + M + + L F + +++ +
Sbjct: 323 -DCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH-- 379
Query: 196 AFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
KVF+E R KP++ N ++ C + V + E + G P+
Sbjct: 380 ---KVFKELIRRGC-------KPDLTLLNTYMD-CVFKAGEVEKGRMIFEDIRSYGFLPD 428
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
S+ L + G + + M + GF+ Y++++ G+ K G + A +
Sbjct: 429 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL- 487
Query: 316 LCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG 373
M++ + TY +V G + + L EA+ GI ++ +
Sbjct: 488 -----EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS---KGIELNVVLYSS 539
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I +G D+A+ IL+EM G + + + L A K EA +
Sbjct: 540 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 599
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+ Y LI Q + AF ++DM++ + +Y T+++GL
Sbjct: 600 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL 649
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 132/311 (42%), Gaps = 8/311 (2%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN+ NA ++ C G K + M GV+P+ +F L + + GL E
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L M + Y++L+ K G ++ A L +++ + +Y
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA----FEILAQMPVKRIMPNVVSYST 414
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V+ GF + G NL E + L GI +DR ++S +G S++A IL EM
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYL---GIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ G + Y L Y K+ + E ++ ++ + ++ Y LI+ ++
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A +FR+ + A + Y ++ L +N + +DE+ ++ + +NSI
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSI 590
Query: 516 IHAFCKAGRLE 526
I AF ++ ++
Sbjct: 591 IDAFGRSATMD 601
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 144/377 (38%), Gaps = 94/377 (24%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V+ A+++ ET G +F L Y GL E+ + + + M E+G +V Y++
Sbjct: 249 VTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNA 308
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
+I G G ME + +V K F
Sbjct: 309 VID-----------------ACGKGGME--------FKQVAKFF---------------- 327
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+++ +G+ DR +++ C GL + A ++ DEM + Y L A CK
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+ A +++ + + +V +Y +I+ + F A +LF +MR Y
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR----------Y 437
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
L I LD V +N+++ + K GR E+A LR M
Sbjct: 438 LGIA---------------LDRV-----------SYNTLLSIYTKVGRSEEALDILREMA 471
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYAL 596
+ + + TY +L+ GY +Y V ++ E+KR EH L + Y+
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR------------EHVLPNLLTYST 519
Query: 597 V-----KGGFFDAVMQV 608
+ KGG + M++
Sbjct: 520 LIDGYSKGGLYKEAMEI 536
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 144/340 (42%), Gaps = 18/340 (5%)
Query: 220 IYACNAALEGCCYGLQSV-SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ-EKIVE 277
+YA +A + YG + +A V +M G+RPN ++ + G++ +++ +
Sbjct: 268 VYAFSALI--SAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M G + ++SL++ G L A+R + + +EQ FS T + +
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 338 -KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEMN 395
KG G +L E P ++ V + +I G D+A ++ EM
Sbjct: 385 CKG--------GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G ++ Y L Y K R+ EA ++ +++S G++ DV Y+AL+ +
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENH-RPELMAAFLDEVVEDPRVEVKTHDWNS 514
+F +M+ + +Y T++ G + E M F + R +V +++
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVL--YSA 554
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+I A CK G + A + M PN TY S+I+ +
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 89/199 (44%), Gaps = 2/199 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+IS G A I + A G + + + AY + EA + + G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 434 LQLDVGNYDALIEA-SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
L+ ++ Y+A+I+A +F+ F +M+ + + ++ +++ E
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
DE+ + R+E +N+++ A CK G+++ A L +M + PN +Y ++I+
Sbjct: 359 RNLFDEMT-NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 553 GYVTAEQYFSVLMMWHEIK 571
G+ A ++ L ++ E++
Sbjct: 418 GFAKAGRFDEALNLFGEMR 436
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 189/480 (39%), Gaps = 43/480 (8%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLI---AHLSSLQDNHNLKRAFASVVYVIEKNPKLLDF 142
EA K + N PS NSLI A L + LK A EK K D
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA------EKGTKP-DV 384
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV-- 200
T TLL A A ++ + M +N G +IC F AF+K+
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEM-RN---------AGCKPNIC----TFNAFIKMYG 430
Query: 201 ----FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSV-SDAEKVIETMSVLGVRPN 255
F E +I + N+ + P+I N L +G + S+ V + M G P
Sbjct: 431 NRGKFTEMMKIFDEINVCGLSPDIVTWNTLL--AVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
+F L Y+ G E+ + + M + G + + Y+++++ + G + S +L
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR-GGMWEQSEKVL 547
Query: 316 LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF-GI 374
+ G + ++ TYC ++ + NG GL + + E SG++ R+V +
Sbjct: 548 AEMEDGRCKPNEL---TYCSLLHAY-ANGKEIGLMHSLAEEVY---SGVIEPRAVLLKTL 600
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
+ C L +A E+ G S + + Y + A+A ++ + G
Sbjct: 601 VLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGF 660
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+ Y++L+ S DF + + R++ I SY T++ N R +
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASR 720
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
E+ + + +N+ I ++ E+A +R MI PN TY S+++GY
Sbjct: 721 IFSEM-RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 141/351 (40%), Gaps = 54/351 (15%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + P+ Y N + CC +A +V E M G ++ ++ L +Y G
Sbjct: 273 DGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY---GKSH 328
Query: 274 KIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
+ E ++NE GFS +V Y+SLIS Y + G L+ A M +
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMEL------KNQMAEKGTKP 382
Query: 331 E--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
+ TY ++ GF + G V+ ++ +++ +G + I N G +
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIF---EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
I DE+N CG S + + L + + +E + + ++ +G + ++ LI A
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
F+ A +++R M +A + P+L
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGV------------------TPDLST--------------- 526
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+N+++ A + G E +++ L M + +PN+ TY SL++ Y ++
Sbjct: 527 ---YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/402 (19%), Positives = 152/402 (37%), Gaps = 54/402 (13%)
Query: 262 LAYLYALKGLQEKIVELESLMN---EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+A + ++ G + ++ ++ N E GFS + Y+SLIS + G A
Sbjct: 176 VAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF---- 231
Query: 319 GGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
ME+ TY ++ F + G ++E K++ GI D +I+
Sbjct: 232 --KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE--KMKSDGIAPDAYTYNTLIT 287
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
C L +A + +EM A G S Y L Y K HR EA +++ ++ +G
Sbjct: 288 CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSP 347
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
+ Y++LI A A L M E +Y T+++G + E +
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 497 DEVVE---DPRV------------------EVKTHD-------------WNSIIHAFCKA 522
+E+ P + +K D WN+++ F +
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGI 582
G + + M F P +T+ +LI+ Y + + ++ + G+
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-------DAGV 520
Query: 583 KFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ + + L AL +GG ++ +V+ + ++ + ++ Y
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 7/199 (3%)
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
C + +AE+ + G P+ ++ + +Y + + K + M E GF+
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
M Y+SL+ + + + + + L G + D +Y V+ + +N ++ +
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKG--IKPDII--SYNTVIYAYCRNTRMRDAS 719
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
+ E + SGIV D I + + ++A ++ M GC Y +
Sbjct: 720 RIFSEMRN---SGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Query: 411 KAYCKEHRTAEATQLVMDI 429
YCK +R EA V D+
Sbjct: 777 DGYCKLNRKDEAKLFVEDL 795
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
K+ IL E+ A G + Y + AYC+ R +A+++ ++ +SG+ DV Y+ I
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
+ F+ A + R M + + +Y +I+ G + +R + F++++
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 128/285 (44%), Gaps = 22/285 (7%)
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA----SRTILLCLGGGNMEQSDFSKET 332
+L S M G S +V YS+LISG+ LG L A ++ IL E T
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL--------ENIKPDVYT 297
Query: 333 YCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHS 389
+ +V F ++G +K + ++ Q ++P+ + + + G+ ++ +KA S
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV------NKAKS 351
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
I + M G + + Y + +CK + EA L ++ + DV Y +LI+
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
S A L M + + +Y +I+ L + H+ + A L ++ +D ++
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKL-KDKGIQPNM 470
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ ++ +I C++G+LEDA++ ++ N TY +I G+
Sbjct: 471 YTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGF 515
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 147/380 (38%), Gaps = 42/380 (11%)
Query: 209 LDENLDF--MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
L + ++F +KPN+ CN + C L + A V + +G P+ +F L
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFC-QLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGL 165
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
LKG ++ + GF + Y +LI G K+G E+ + LL GN+ Q
Sbjct: 166 CLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVG--ETRAALDLLQRVDGNLVQP 223
Query: 327 D-----------------------FSKE----------TYCEVVKGFLQNGNVKGLANLI 353
+ FS+ TY ++ GF G + +L
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLF 283
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
K+ I D +++A G + ++ D M G Y + Y
Sbjct: 284 ---NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C +A + ++ G+ D+ +Y +I + F A +LF++M I
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y +++ GL ++ R +D+ + D V +NSI+ A CK +++ A L
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQ-MHDRGVPPTIRTYNSILDALCKIHQVDKAIALLT 459
Query: 534 RMIFLQFEPNDQTYLSLING 553
++ +PN TY LI G
Sbjct: 460 KLKDKGIQPNMYTYSILIKG 479
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 146/361 (40%), Gaps = 22/361 (6%)
Query: 193 NFVAFLKVFEECCRIAL-DENLDF--------MKPNIYACNAALEGCCYGLQSVSDAEKV 243
N V + + + C++ L +E D + P++ +A + G C L ++DA +
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCI-LGKLNDAIDL 282
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
M + ++P+ +F L + G ++ + +M + G V Y+SL+ GY
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
+ + A ++I + G + ++Y ++ GF + NL E +
Sbjct: 343 VKEVNKA-KSIFNTMAQGGVNPD---IQSYSIMINGFCKIKKFDEAMNLFKEMHR---KN 395
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
I+ D +I G A ++D+M+ G + Y L A CK H+ +A
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAI 455
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG- 482
L+ + G+Q ++ Y LI+ S + A +F + + ++L TIM
Sbjct: 456 ALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLL-VKGHNLNVDTYTIMIQG 514
Query: 483 -LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
+E E +A L +ED + II + K + A++ LR MI
Sbjct: 515 FCVEGLFNEALA--LLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVR 572
Query: 542 P 542
P
Sbjct: 573 P 573
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 20/239 (8%)
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
D++ A G Y + CK T A L+ + + +Q +V Y+ +I++
Sbjct: 179 DKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKV 238
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-MENHRPELMAAFLDEVVEDPRVEVKTH 510
+ AF LF +M I +Y +++G + + + F ++E+ + +V T
Sbjct: 239 KLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYT- 297
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+N +++AFCK G++++ K M+ +PN TY SL++GY ++ ++
Sbjct: 298 -FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV-------NKA 349
Query: 571 KRKISTDGQKGIKFEHNLVDAFLYALVKGGF-----FDAVMQVVEKSQEMKVFVDKWKY 624
K +T Q G+ D Y+++ GF FD M + ++ + D Y
Sbjct: 350 KSIFNTMAQGGVN-----PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTY 403
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 107/507 (21%), Positives = 196/507 (38%), Gaps = 60/507 (11%)
Query: 107 NSLIAHLSSLQDNHNLKRAFASVVYVIEK-----NPKLLDFQTVHTLLGSMRNANTAAPA 161
N+++A L +H L++A + +V + + P + + TV L + R A
Sbjct: 87 NTVLAALCRRGGDH-LRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEA--- 142
Query: 162 FALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIY 221
AL++ M + +G + +C S A L++ +E C + +PN+
Sbjct: 143 VALLRSMQASGVRADVVTYGTLIRGLC-DASELDAALELLDEMCGSGV-------QPNVV 194
Query: 222 ACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESL 281
+ L G C + D KV E MS G++P+ F L +G K +++ +
Sbjct: 195 VYSCLLRGYCRSGRW-QDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDM 253
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M + G +V Y+ LI+ K G++ A T+ + + + T + G L
Sbjct: 254 MVQRGLEPNVVTYNVLINSLCKEGSVREAL-TLRKEMDDKGVAPDVVTYNTLIAGLSGVL 312
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
+ +I+ + +V SV G+ +G +A + + M GC
Sbjct: 313 EMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGL----CKIGRMTQAVKVREMMAERGCMC 368
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
L Y + + + H+ A L+ +++ SGL+ D Y LI + A
Sbjct: 369 NLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFL 428
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
MR+ I Y+ ++ + + E +E+ D + ++++IH CK
Sbjct: 429 CTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM--DKNCGLDAIAYSTMIHGACK 486
Query: 522 AGR-----------------------------------LEDAKRTLRRMIFLQFEPNDQT 546
+G LE+A+R L++M F P+
Sbjct: 487 SGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAV 546
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ SLI GY Q VL + HE++ K
Sbjct: 547 FDSLIKGYSAEGQTDKVLKLIHEMRAK 573
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 129/334 (38%), Gaps = 66/334 (19%)
Query: 319 GGGNMEQS-----DFSKE----------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
GG ++ Q+ D S+E +Y V++G + L+ + ++ SG
Sbjct: 97 GGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALL---RSMQASG 153
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+ D +I + D A +LDEM G + VY L+ YC+ R +
Sbjct: 154 VRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVG 213
Query: 424 QLVMDISSSGLQLD-----------------------------------VGNYDALIEAS 448
++ D+S G++ D V Y+ LI +
Sbjct: 214 KVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSL 273
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-DPRVEV 507
+ A +L ++M + + +Y T++ GL + +FL+E+++ D VE
Sbjct: 274 CKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEP 333
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+NS+IH CK GR+ A + M N TY LI G++
Sbjct: 334 DVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRV---------- 383
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
H++K ++ + I D+F Y+++ GF
Sbjct: 384 HKVKMAMNLMDELAISGLEP--DSFTYSILINGF 415
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 169/398 (42%), Gaps = 59/398 (14%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ N + G C + +A K+ + M + + G+L + G K+
Sbjct: 267 EPDVQTFNDVIHGLCKA-GRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMG---KVD 322
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
E +++++ + V Y++LI+GYV G E A + NM + F + T+
Sbjct: 323 EARAMLSKIP-NPNTVLYNTLINGYVVSGRFEEAKDLLY-----KNMVIAGFEPDAFTFN 376
Query: 335 EVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ G + G + + E K EP+ V+ ++ +I G ++A +++
Sbjct: 377 IMIDGLCKKGYLVSALEFLDEMVKKGFEPN--VITYTI---LIDGFCKQGHFEEASKVVN 431
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M+A G S+ Y + A CK+ + +A Q+ ++SS G + D+ +++LI +
Sbjct: 432 SMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKND 491
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM-------------AAFLDEV 499
+ A L+RDM + +Y T++ + R EL+ LD +
Sbjct: 492 KMEEALGLYRDMLLEGVIANTVTYNTLIHAFL---RLELIQQADKLVGEMRFRGCPLDNI 548
Query: 500 VEDPRVEV------------------------KTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
+ ++ + N +I++FC+ G++ DA + LR M
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDM 608
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
I P+ TY SLING ++ L +++ ++ K
Sbjct: 609 IQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAK 646
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 114/541 (21%), Positives = 209/541 (38%), Gaps = 65/541 (12%)
Query: 80 LTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASV--VYVIEKNP 137
+ N D A + +T + P+ + LI LS +N+ + A + ++++ P
Sbjct: 212 MVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALS---ENNRVNEAMKLLEEMFLMGCEP 268
Query: 138 KLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLV-DICRKNSNFVA 196
D QT + ++ + A A L M R F L G+L+ +CR
Sbjct: 269 ---DVQTFNDVIHGLCKAGRIHEAAKLHDRMLL-RDFTADALIQGYLMHGLCRMG----- 319
Query: 197 FLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNE 256
KV E ++ N PN N + G + + + + M + G P+
Sbjct: 320 --KVDEARAMLSKIPN-----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDA 372
Query: 257 SSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI-- 314
+F + KG +E M + GF ++ Y+ LI G+ K G+ E AS+ +
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNS 432
Query: 315 ------------------LLCLGG---------GNMEQSDFSKETYC--EVVKGFLQNGN 345
LC G G M + Y ++ G +N
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
++ L + + G++ + +I A + L L +A ++ EM GC +
Sbjct: 493 MEEALGLY---RDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNIT 549
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y +KA CK T + L+ + + + + + LI + + A RDM
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+ + +Y +++ GL + R + A L ++ + +N++I +C G
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQ-EALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLF 668
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYV---TAEQYFSVLM----MW-HEIKRKISTD 577
DA + L + + F PN+ T+ LIN +V + + F++LM W I R +S+
Sbjct: 669 NDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTILMGNWGFWLAAIIRHVSSI 728
Query: 578 G 578
G
Sbjct: 729 G 729
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 51/245 (20%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY--- 413
++++ G V S+ I+ GL +A +L +M C + PT K+Y
Sbjct: 118 KQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYC------FEPTFKSYNVV 171
Query: 414 ----CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ A + D+ S G+ V + +++A + SA SL RDM +
Sbjct: 172 LEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGC 231
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLE 526
Y ++ L EN+R L+E+ +P V+ +N +IH CKAGR+
Sbjct: 232 VPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQT----FNDVIHGLCKAGRIH 287
Query: 527 DAKRTLRRMIFLQF-------------------------------EPNDQTYLSLINGYV 555
+A + RM+ F PN Y +LINGYV
Sbjct: 288 EAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYV 347
Query: 556 TAEQY 560
+ ++
Sbjct: 348 VSGRF 352
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 85/196 (43%), Gaps = 2/196 (1%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G + V + +I N+G +L +M GC +++ ++ Y K +A
Sbjct: 89 GYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQA 148
Query: 423 TQLVMDI-SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
T+L++D+ + +Y+ ++E + + A ++F DM I ++ +M
Sbjct: 149 TRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMK 208
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
+ + + L ++ + V + + +IHA + R+ +A + L M + E
Sbjct: 209 AFCMVNEVDSACSLLRDMTKHGCVP-NSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCE 267
Query: 542 PNDQTYLSLINGYVTA 557
P+ QT+ +I+G A
Sbjct: 268 PDVQTFNDVIHGLCKA 283
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 160/393 (40%), Gaps = 32/393 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ ++G C Q V A+ V + M GVRPN ++ L + Y G +++V+
Sbjct: 200 PNVVTYTTVIDGLCKA-QMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQ 258
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK------E 331
+ M+ G Y+ L+ K G C N+ S K
Sbjct: 259 MLQEMSTHGLQPDCYIYAVLLDYLCKNGR----------CTEARNIFDSVIRKGIKPNVT 308
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
Y ++ G+ G++ + + + + +G+ D + + A + D+A I
Sbjct: 309 IYGILLHGYATEGSLSEMHSFL---DLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIF 365
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
D+M S + Y + A CK R +A + G+ D+ + +L+ T
Sbjct: 366 DKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTV 425
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH- 510
++ A LF ++ + I + T+M L R +D ++ RV V+
Sbjct: 426 DKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLML---RVGVRPDV 482
Query: 511 -DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+N+++ C GR+++A + L ++ + +P+ TY +L++GY A + ++ E
Sbjct: 483 ISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFRE 542
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFF 602
+ KG+ + + L+ L + G F
Sbjct: 543 ML-------MKGLTPDVVTYNTILHGLFQTGRF 568
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 159/418 (38%), Gaps = 60/418 (14%)
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDAEK 242
L+D KN +F+ R + KPN+ L G Y + S+S+
Sbjct: 278 LLDYLCKNGRCTEARNIFDSVIRKGI-------KPNVTIYGILLHG--YATEGSLSEMHS 328
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
++ M GV P+ F + YA K + ++ + + M + S +V Y +LI
Sbjct: 329 FLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALC 388
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
KLG ++ A + G M F + +V G + L E
Sbjct: 389 KLGRVDDAVLKFNQMIDEG-MTPDIF---VFSSLVYGLCTVDKWEKAEELFFEVLD---Q 441
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
GI +D ++ G +A ++D M G + Y + +C R EA
Sbjct: 442 GIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEA 501
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+L+ I S GL+ D Y+ L+ ++ A+SLFR+M
Sbjct: 502 AKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREM------------------ 543
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
LM+ P+++ +N+I+H + GR +AK MI + +
Sbjct: 544 LMKGLTPDVVT------------------YNTILHGLFQTGRFSEAKELYLSMINSRTQM 585
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
N TY +ING M+H + S D Q I F N++ + AL+KGG
Sbjct: 586 NIYTYNIIINGLCKNNFVDEAFKMFHSL---CSKDLQLDI-FTANIM---IGALLKGG 636
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 12/237 (5%)
Query: 385 DKAHSIL-DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG---LQLDVGN 440
D+A IL M GC+ + Y LK +C E R EA +L+ ++ G +V
Sbjct: 145 DEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVT 204
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y +I+ +Q A +F+ M + + +Y ++ G + + + + L E +
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQE-M 263
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
++ + + ++ CK GR +A+ +I +PN Y L++GY T E
Sbjct: 264 STHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYAT-EGS 322
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
S E+ + G+ +H++ + A K D M + +K ++ ++
Sbjct: 323 LS------EMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRL 373
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 100/248 (40%), Gaps = 19/248 (7%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLI---AHLSSLQDNHNLK 123
++ S T + LT DEA K + + L P K N+L+ + D ++L
Sbjct: 481 DVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLF 540
Query: 124 RAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGF 183
R + + P D T +T+L + + A L M +R M +
Sbjct: 541 RE----MLMKGLTP---DVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNII 593
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
+ +C+ N AF K+F C + D LD NI A L+G DA +
Sbjct: 594 INGLCKNNFVDEAF-KMFHSLC--SKDLQLDIFTANIMI-GALLKG-----GRKEDAMDL 644
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
T+S G+ P+ ++ +A +G E++ EL S M E G + ++L+ +
Sbjct: 645 FATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLH 704
Query: 304 LGNLESAS 311
G++ A
Sbjct: 705 RGDINRAG 712
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 151/358 (42%), Gaps = 13/358 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PNI N ++ C Q + +A + + P+ +F L +G +
Sbjct: 445 PNIMTVNIMIDRLCKA-QKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYS 503
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M + +V Y+SLI + K G E + + G +Y + V
Sbjct: 504 LYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRG-CSPDLMLLNSYMDCV 562
Query: 338 KGFLQNGNV-KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ G V KG A ++++ G+V D +I V G S + + + EM
Sbjct: 563 ---FKAGEVEKGRALF----EEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKE 615
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + + Y + +CK + +A QL+ ++ + GLQ V Y ++++
Sbjct: 616 QGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDE 675
Query: 457 AFSLFRDMREARIYDLKGS-YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A+ LF + + + DL Y +++ G + R + L+E+++ + ++ WN +
Sbjct: 676 AYMLFEEAKSIGV-DLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG-LTPNSYTWNCL 733
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ A KA +++A+ + M L+ PN TY +ING ++ + W E++++
Sbjct: 734 LDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQ 791
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 127/322 (39%), Gaps = 15/322 (4%)
Query: 241 EKVIETMSVLGVR-PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
E+++E MSV G N S +A L+E +E +M +F F Y++LI
Sbjct: 153 EQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIE-MMRKFKFRPAFSAYTTLI- 210
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEAQ 357
G L +A+R + M++ + + +V+ F + G + +L+ E
Sbjct: 211 -----GALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDE-- 263
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
++ + D + I +G D A EM A G Y + CK
Sbjct: 264 -MKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKAR 322
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
R EA +L ++ + V Y+ +I ++ F A+SL + +Y
Sbjct: 323 RLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYN 382
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
I+T L + E DE+ +D + T +N +I CKAG LE A + M
Sbjct: 383 CILTCLGRKGKVEEALRIHDEMRQDAAPNLTT--YNILIDMLCKAGELEAALKVQDTMKE 440
Query: 538 LQFEPNDQTYLSLINGYVTAEQ 559
PN T +I+ A++
Sbjct: 441 AGLFPNIMTVNIMIDRLCKAQK 462
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 75/189 (39%), Gaps = 7/189 (3%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D IL+EM+ G + V V + ++ K H+ EA ++ + + Y L
Sbjct: 150 DYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTL 209
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I A + +LF M+E + T++ R + + LDE+ +
Sbjct: 210 IGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSF 269
Query: 505 VEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
T D +N I F K G+++ A + M P+D TY +LI A +
Sbjct: 270 ----TADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLD 325
Query: 562 SVLMMWHEI 570
+ ++ E+
Sbjct: 326 EAVELFEEL 334
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
Q++ ++S +G L L+ + + S + AF + MR+ + +Y T++ L
Sbjct: 154 QILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGAL 213
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+RP+ M + +++ E H + +++ F + GR++ A L M F +
Sbjct: 214 SAANRPDPMLTLFHQ-MQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTAD 272
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIK 571
Y I+ + + +HE+K
Sbjct: 273 LVLYNVCIDCFGKVGKVDMAWKFFHEMK 300
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 146/343 (42%), Gaps = 19/343 (5%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M E G + ++ +++LI+G G + A+ + +G G TY +V G
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG----LHIDVVTYGTIVNGMC 56
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
+ G+ K NL+ K+E + I D + II G A + EM G +
Sbjct: 57 KMGDTKSALNLL---SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 113
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ Y + +C R ++A +L+ D+ + DV ++ALI AS+ A L
Sbjct: 114 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 173
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
+M I+ +Y +++ G +++R + D ++ P V +N+II +C+
Sbjct: 174 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD-LMASPDVVT----FNTIIDVYCR 228
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKG 581
A R+++ + LR + N TY +LI+G+ + + ++ E+ G
Sbjct: 229 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI-------SHG 281
Query: 582 IKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ + + LY + + +++ E Q K+ +D Y
Sbjct: 282 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 324
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ YC+ R E QL+ +IS GL + Y+ LI + +A LF++M +
Sbjct: 223 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 282
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+ ++ G EN + E A L EV++ ++++ T +N IIH CK ++++A
Sbjct: 283 CPDTITCNILLYGFCENEKLE-EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 341
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
+ EP+ QTY +I+G+ +++H++K G + +++
Sbjct: 342 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK-------DNGHEPDNSTY 394
Query: 590 DAFLYALVKGGFFDAVMQVVEK 611
+ + +K G D ++++ +
Sbjct: 395 NTLIRGCLKAGEIDKSIELISE 416
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 180/452 (39%), Gaps = 63/452 (13%)
Query: 110 IAHLSSLQDNHNLKRAFASVVYVIEKNPKL---LDFQTVHTLLGSMRNANTAAPAFALVK 166
I LSSL + + + + V ++++ ++ D T TL+ + N A+ A ALV
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVD 212
Query: 167 CMFKNRYFMPFELWGGFLVDICRKNSNFVAF--LKVFEECCRIALDENLDFMKPNIYACN 224
M + +G + +C++ +A LK E+ ++ ++ N
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK----------GKIEADVVIYN 262
Query: 225 AALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE 284
++G C + + DA + M G+RP+ ++ L G L S M E
Sbjct: 263 TIIDGLC-KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 285 FGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS-DFSKETYCEVVKGFLQN 343
+ +V +S+LI +VK G L A + L +++S D TY ++ GF +
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEK-----LYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
+ D+A + + M + C +
Sbjct: 377 DRL--------------------------------------DEAKHMFELMISKDCFPNV 398
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y +K +CK R E +L ++S GL + Y LI ++D +A +F+
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 464 MREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKA 522
M ++ +Y ++ GL +N + + M F E ++ +E + +N +I CKA
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF--EYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
G++ED + PN Y ++I+G+
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 161/409 (39%), Gaps = 53/409 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+I ++ L G C+ + +SDA +++ M +G +P+ +F L + L + V
Sbjct: 150 EPDIVTLSSLLNGYCHS-KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L M + G +V TY V
Sbjct: 209 ALVDQMVQRGCQPDLV---------------------------------------TYGTV 229
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V G + G++ +L+ +K+E I D + II D A ++ EM+
Sbjct: 230 VNGLCKRGDIDLALSLL---KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + Y + C R ++A++L+ D+ + +V + ALI+A +
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGL-MENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A L+ +M + I +Y +++ G M + E F + +D V T ++++
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--YSTL 404
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I FCKA R+E+ R M N TY +LI+G+ A + M++ K+ +S
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF---KQMVS 461
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
I + L+D L K G M V E Q + D + Y
Sbjct: 462 VGVHPNILTYNILLD----GLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 139/335 (41%), Gaps = 20/335 (5%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
E M LG+ + ++ + + + + + M + G+ +V SSL++GY
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKETYC--EVVKG-FLQNGNVKGLANLIIEAQKLEP 361
+ A + M + + +T+ ++ G FL N + +A + Q+
Sbjct: 167 KRISDAVALV------DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR--- 217
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
G D +++ G D A S+L +M + +Y + CK +
Sbjct: 218 -GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A L ++ + G++ DV Y +LI + A L DM E +I ++ ++
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 482 GLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ + DE+++ DP + ++S+I+ FC RL++AK MI
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDI----FTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
PN TY +LI G+ A++ + ++ E+ ++
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 147/359 (40%), Gaps = 23/359 (6%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T +L+ + N + A L+ M + R P + L+D K V K+
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
++E + ++D P+I+ ++ + G C + +A+ + E M PN ++
Sbjct: 351 YDEMIKRSID-------PDIFTYSSLINGFCMH-DRLDEAKHMFELMISKDCFPNVVTYS 402
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L + E+ +EL M++ G V Y++LI G+ + + ++A +
Sbjct: 403 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 462
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
G + TY ++ G +NG LA ++ + L+ S + D +I
Sbjct: 463 GVHP----NILTYNILLDGLCKNGK---LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G + + ++ G S + Y + +C++ EA L+ + G + G
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN--HRPELMAAFLD 497
Y+ LI A + D +++ L ++MR G TI GL+ N H L +FLD
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSC---GFAGDASTI--GLVTNMLHDGRLDKSFLD 629
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A LF DM ++R + + +++ + + ++ EL+ + L E ++ + + ++ I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVIS-LGEQMQTLGISHDLYTYSIFI 125
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ FC+ +L A L +M+ L +EP+ T SL+NGY +++
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 149/360 (41%), Gaps = 31/360 (8%)
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
RPN S+ L L ++ V L M G + +V Y +LI G ++ A
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 313 TILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
+ G M +S Y +++G+ ++G + + + +E + GI D +
Sbjct: 172 LM------GEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVE---MSEKGIEPDVVM 222
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
G+I + +G + KAH ++D M G + Y + CKE EA ++ +S
Sbjct: 223 YTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMS 282
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT---IMTGLMENH 487
G+ DV Y+ LI+ + A L +M + +K + +T ++ GL +
Sbjct: 283 EKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNI-VKPNVVTFNSVIQGLCDIG 341
Query: 488 RPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
R + AF + ++E+ V +N +I + ++ A + M L EP+ T
Sbjct: 342 R--MRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFT 399
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRK---ISTDGQKGIKFEHNLVDAFLYALVKGGFFD 603
Y LI G+ MW ++ R +ST +GI+ E L A+ + G +
Sbjct: 400 YSILIKGFCK---------MW-QVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMME 449
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 143/353 (40%), Gaps = 35/353 (9%)
Query: 233 GLQSVSDAEKVIETMSVL---GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
GL ++ +K +E M + G+ PN + L Y G E + ++ M+E G
Sbjct: 159 GLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEP 218
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGG--------NMEQSDFSKETYCEVVKGFL 341
+V Y+ LI K+G + A + + + G N+ + KE + G L
Sbjct: 219 DVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVL 278
Query: 342 QNGNVKGLA------NLIIEA---------------QKLEPSGIVVDRSVGF-GIISACV 379
+ + KG+A N +I+ + + IV V F +I
Sbjct: 279 KKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLC 338
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
++G +A + M GC V L Y + + H+ +A +L+ +++S GL+ D
Sbjct: 339 DIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSF 398
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y LI+ A L MR+ I Y+ ++ + E E +E+
Sbjct: 399 TYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM 458
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
D + ++++IH CKAG L+ AK L+ ++ P+ TY +IN
Sbjct: 459 --DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVIN 509
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 174/396 (43%), Gaps = 23/396 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P++ ++ C + A V++ M G+ PN ++ L +G ++
Sbjct: 216 IEPDVVMYTGLIDSLCK-VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEA 274
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ + M+E G + +V Y++LI G + ++ A + + G N+ + + T+
Sbjct: 275 IGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVV--TFNS 332
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V++G G ++ + +E +G +V+ +I + + KA ++DEM
Sbjct: 333 VIQGLCDIGRMRQAFQV---RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMT 389
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ G Y +K +CK + A L+ + G++ ++ +Y L+ A +
Sbjct: 390 SLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMME 449
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLME----NHRPELMAAFLDEVVEDPRVEVKTHD 511
A +LF +M D+ +Y T++ G + EL+ + +DE + V
Sbjct: 450 RARNLFNEMDNNFPLDVV-AYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVT----- 503
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
++ +I+ F K+G +E A L++M F P+ + SLI GY T + VL E+
Sbjct: 504 YSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVL----ELI 559
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQ 607
R++ T K I + ++ +LV A++Q
Sbjct: 560 REMIT---KNIALDSKIISTLSTSLVASNEGKALLQ 592
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 168/422 (39%), Gaps = 49/422 (11%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
+I N + G C + DA+ V + M G PN ++ L G L
Sbjct: 49 DISTFNIYISGLCRA-SRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQAL 107
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG--------NMEQSDFSK 330
M + G+S +V Y++L+ G+ K+G L+ A + + G N + F K
Sbjct: 108 YERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCK 167
Query: 331 E-----------------------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
TY +V G +NG V A ++I + P+ I
Sbjct: 168 ADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDE-ARMLIVDKGFSPNVITYS 226
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+ C L + A +L++M GC + Y + +E +EA +L
Sbjct: 227 TLIS----GLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFG 282
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ G + +V Y+ LI+ + AF LF + + + +Y + GL +
Sbjct: 283 SVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG 342
Query: 488 RPE---LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
R E LM +DE P +V +H N++I+ CK R+++A+ L M PN
Sbjct: 343 RVEDALLMLKDMDEKGCVP--DVVSH--NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNA 398
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN-LVDAFLYALVKGGFFD 603
++ +LI G A ++ + + E+ ++ G K +N LVD A +G +
Sbjct: 399 ISFNTLICGQCRAGKWKKAMTTFKEMLKR----GVKPTVVTYNILVDGLCKARQEGRIKE 454
Query: 604 AV 605
A+
Sbjct: 455 AI 456
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 146/341 (42%), Gaps = 50/341 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY-LYALKGLQEKIV 276
PN+ + + G C L+ + A +++E M + G +P+ S+ L + L +G+ E +
Sbjct: 220 PNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALK 279
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
S++ + G+ ++ Y+ LI G +K D E + E+
Sbjct: 280 LFGSVLRQ-GYEPEVPTYNILIDGLLK----------------------EDRVNEAF-EL 315
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
G +++G LEP I I G + A +L +M+
Sbjct: 316 FSGLVKHG--------------LEPDAITYTV-----FIDGLCKAGRVEDALLMLKDMDE 356
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
GC + + + CKE R EA L+ + + G + +++ LI + ++
Sbjct: 357 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 416
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLM---ENHRPELMAAFLDEVVEDPRV-EVKTHDW 512
A + F++M + + +Y ++ GL + R + D ++E RV +V T +
Sbjct: 417 AMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT--Y 474
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+++I KAG+L+DA+R L M PN TY SLI+G
Sbjct: 475 SALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 515
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 382 GLSDKAHSILDEMNACG-CSVG-LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
G +KAH ++++ G C + +Y+ L C+ R +A + + G +
Sbjct: 30 GKIEKAHRFVEQLLVKGLCDISTFNIYISGL---CRASRIGDAQTVFDGMRKHGFWPNRI 86
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y+AL+ A +L+ M +A +Y T++ G + + + D
Sbjct: 87 TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGA 146
Query: 500 VEDPRV-EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
V+ V +V T +N++I+ FCKA +L++A+R L+RM+ P+ TY SL+NG
Sbjct: 147 VKRGFVPDVVT--YNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNG 199
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
L++ K + +A + V + GL D+ ++ I + A ++F MR+
Sbjct: 23 LRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVFDGMRKHGF 81
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLE 526
+ + +Y +++GL R A + +++ P V +N+++H FCK G+L+
Sbjct: 82 WPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVT----YNTLLHGFCKVGKLD 137
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+A + + F P+ TY +LING+ A++
Sbjct: 138 EALKIFDGAVKRGFVPDVVTYNALINGFCKADK 170
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 181/496 (36%), Gaps = 38/496 (7%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
++ + T LH DEA K F P N+LI +R
Sbjct: 119 DVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRIL 178
Query: 127 ASVVYVIEKNPKLLDFQTVHTLL-GSMRNANTAAPAFALVKCMFKNRYFMPFEL-WGGFL 184
+V + D T ++L+ G +N +V ++ F P + + +
Sbjct: 179 QRMV----SESLVPDVVTYNSLVNGLCKNGRVDEARMLIV-----DKGFSPNVITYSTLI 229
Query: 185 VDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVI 244
+CR+ + ++ E+ L+ KP+I + NA + G Q VS+A K+
Sbjct: 230 SGLCRELRRLESARQLLEKMV-------LNGCKPDIVSYNALIHGLARE-QGVSEALKLF 281
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
++ G P ++ L + + EL S + + G + Y+ I G K
Sbjct: 282 GSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA 341
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLI--IEAQKLE 360
G +E A LL L +M++ + ++ V+ G + V L+ +EA+
Sbjct: 342 GRVEDA----LLML--KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 395
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK---EH 417
P+ I + +I G KA + EM G + Y + CK E
Sbjct: 396 PNAISFNT-----LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEG 450
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
R EA L + G DV Y ALI+ + A L M +Y
Sbjct: 451 RIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYN 510
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++++GL + + +VE V T + +II A CK ++ A +
Sbjct: 511 SLISGLCGLDKVDEALELFVAMVEKGCVP-DTITYGTIISALCKQEMVDKALALFDGSLE 569
Query: 538 LQFEPNDQTYLSLING 553
P Y SLI+G
Sbjct: 570 AGVVPTSGMYFSLIDG 585
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 93/271 (34%), Gaps = 40/271 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ + NA + G C + V +AE ++ M G PN SF L G +K +
Sbjct: 361 PDVVSHNAVINGLCKE-KRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMT 419
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M + G +V Y+ L+ G K +R
Sbjct: 420 TFKEMLKRGVKPTVVTYNILVDGLCK-------AR------------------------- 447
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
Q G +K L + G V D +I G D A +L M A
Sbjct: 448 ----QEGRIKEAITLF---DAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 500
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC + Y + C + EA +L + + G D Y +I A + A
Sbjct: 501 GCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKA 560
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+LF EA + G Y +++ GL R
Sbjct: 561 LALFDGSLEAGVVPTSGMYFSLIDGLCAVAR 591
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 205/496 (41%), Gaps = 70/496 (14%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
DEA F + A P+ N+L+ + L ++RA A + +++K D T
Sbjct: 377 DEACSVFDDMIAGGYVPNVITYNALV---NGLCKADKMERAHAMIESMVDKGVTP-DVIT 432
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD-ICRKNSNFVAFLKVFEE 203
L+ + A+ A L+ M +R P + ++D +C+ + + AF ++F++
Sbjct: 433 YSVLVDAFCKASRVDEALELLHGM-ASRGCTPNVVTFNSIIDGLCKSDRSGEAF-QMFDD 490
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
+AL L P+ ++G + AE +++ M P+ ++ F
Sbjct: 491 ---MALKHGL---VPDKITYCTLIDGL-FRTGRAGQAEALLDAM------PDPDTYAFNC 537
Query: 264 YLYALKGLQE--KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+ L L + + +++ + M E V ++ LI+G K GN E AS + +
Sbjct: 538 CINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQAS-ALFEEMVAK 596
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE-PSGIVVDRSVGFGIISACVN 380
N+ Q D T+ ++ G + G V+ +++ L P +V ++ G+ +
Sbjct: 597 NL-QPDVM--TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKS--- 650
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G ++A L+EM + GC Y + A C+ RT +A QLV ++ S G D
Sbjct: 651 -GRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 709
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y+ L++ S + A ++ +M + + H P+++
Sbjct: 710 YNILVDGLWKSGQTEQAITVLEEM------------------VGKGHHPDVVT------- 744
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM---IFLQFEPNDQTYLSLINGYVTA 557
+N++I + CKAG LE+A+R M + PN TY LING
Sbjct: 745 -----------YNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKV 793
Query: 558 EQYFSVLMMWHEIKRK 573
+ + E+ RK
Sbjct: 794 GRIDEARELIQEMMRK 809
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 169/396 (42%), Gaps = 45/396 (11%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + P I N + G C + ++ E + G P+ ++ L G E
Sbjct: 210 DGVAPTIVTYNTIINGLCKS-NELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLE 268
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA----------SRTILLCLGGGNM 323
+ L M+ +V YS LI+G K+G ++ A S +L + N
Sbjct: 269 EARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNS 328
Query: 324 EQSDFSKETY----CEVVKGFLQNGNVK---------GLANLIIEAQKLEPSGIVVDRSV 370
K++ CE+++ L++G+++ L + + + +++ + V D +
Sbjct: 329 FLDGLCKQSMTAEACELMRS-LRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI 387
Query: 371 GFGII------SACVNLGLS-----DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
G + +A VN GL ++AH++++ M G + + Y + A+CK R
Sbjct: 388 AGGYVPNVITYNALVN-GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 446
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM--REARIYDLKGSYL 477
EA +L+ ++S G +V ++++I+ S AF +F DM + + D K +Y
Sbjct: 447 DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPD-KITYC 505
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
T++ GL R A LD + DP T+ +N I+ K G + A + RM+
Sbjct: 506 TLIDGLFRTGRAGQAEALLD-AMPDP----DTYAFNCCINGLSKLGDVSRALQVYNRMLE 560
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
L+ P+ T+ LI G A + ++ E+ K
Sbjct: 561 LELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 596
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 157/378 (41%), Gaps = 22/378 (5%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
+E C + D PN+ NA + G C + A +IE+M GV P+ ++
Sbjct: 376 IDEACSVFDDMIAGGYVPNVITYNALVNGLCKA-DKMERAHAMIESMVDKGVTPDVITYS 434
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL-LCLG 319
L + ++ +EL M G + +V ++S+I G K A + + L
Sbjct: 435 VLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALK 494
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
G + K TYC ++ G + G G A +++A +P + C+
Sbjct: 495 HGLVPD----KITYCTLIDGLFRTGRA-GQAEALLDAMP-DPDTYA---------FNCCI 539
Query: 380 N----LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
N LG +A + + M + + CK +A+ L ++ + LQ
Sbjct: 540 NGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 599
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
DV + ALI+ + ++A + M + +Y ++ GL ++ R E F
Sbjct: 600 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF 659
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
L+E+V V + + S+++A C+A R +DA + + + ++P+ TY L++G
Sbjct: 660 LEEMVSSGCVP-DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 718
Query: 556 TAEQYFSVLMMWHEIKRK 573
+ Q + + E+ K
Sbjct: 719 KSGQTEQAITVLEEMVGK 736
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 141/361 (39%), Gaps = 56/361 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETM--SVLGVRPNESSF-GFLAYLYALKGLQEK 274
PN+ + + G C + + +A ++I+ M V PN ++ FL L + E
Sbjct: 778 PNVVTYSVLINGLCK-VGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEA 836
Query: 275 IVELESLMN-EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ SL + S V +S+LI G K G + A + GG +
Sbjct: 837 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNV------- 889
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
V L NG + + K+E +AH++++
Sbjct: 890 --VTYNVLMNG--------LCKTDKME-------------------------RAHAMIES 914
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G + + Y + A+CK EA +L+ ++S G +V ++++I+ S
Sbjct: 915 MVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQ 974
Query: 454 FQSAFSLFRDMR-EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
AF +F DM + + K +Y T++ GL LD + DP T+ +
Sbjct: 975 SGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLD-AMPDP----DTYAF 1029
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
N I+ K G D R L RM+ L+ P+ T+ LI G A + ++ E+
Sbjct: 1030 NCCINGLSKLG---DVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVA 1086
Query: 573 K 573
K
Sbjct: 1087 K 1087
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 180/453 (39%), Gaps = 72/453 (15%)
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVA 196
P + TV T G N A AL M K F+P ++ + K S F
Sbjct: 348 PNAFTYNTVMTAYG---NVGKVDEALALFDQM-KKTGFVPNVNTYNLVLGMLGKKSRFTV 403
Query: 197 FLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD-AEKVIETMSVLGVRPN 255
L++ E R PN N L C G + + D +V+E M GV +
Sbjct: 404 MLEMLGEMSRSGC-------TPNRVTWNTMLAVC--GKRGMEDYVTRVLEGMRSCGVELS 454
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
++ L Y G + ++ + M GF+ + Y++L++ + G+ +A +
Sbjct: 455 RDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIV- 513
Query: 316 LCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLA---NLIIEAQKLEPSGIVVDRSV 370
M F ++++Y +++ + + GNV G+A N + + + PS +++
Sbjct: 514 -----SKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRT-- 566
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
++ A D + E+ A G + L ++ L Y K ++AT++ I
Sbjct: 567 ---LVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIK 623
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
SGL D+ Y++L++ + A + ++ + +P+
Sbjct: 624 RSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLK-----------------CSQTMKPD 666
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+++ +N++I+ FCK G +++A+R L M+ P TY +L
Sbjct: 667 VVS------------------YNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTL 708
Query: 551 INGYVTAEQYFSVLMMWHEIKRKISTDGQKGIK 583
+ GY S L M+ E + I Q G+K
Sbjct: 709 VGGY-------SSLEMFSEAREVIGYMVQHGLK 734
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 156/385 (40%), Gaps = 23/385 (5%)
Query: 200 VFEECCRIAL-DENLDFMK--------PNIYACNAALEGCCYG-LQSVSDAEKVIETMSV 249
V CCR L DE + F + P + NA L+ +G + ++A +V+ M
Sbjct: 251 VIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQ--VFGKAGNYTEALRVLGEMEQ 308
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G +P+ ++ LA YA G E+ M G Y+++++ Y +G ++
Sbjct: 309 NGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDE 368
Query: 310 ASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A M+++ F + TY +V G L G ++ ++ SG +
Sbjct: 369 ALALF------DQMKKTGFVPNVNTY-NLVLGML--GKKSRFTVMLEMLGEMSRSGCTPN 419
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
R +++ C G+ D +L+ M +CG + Y + AY + A ++
Sbjct: 420 RVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYN 479
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+++S+G + Y+AL+ D+ +A S+ MR + SY ++ +
Sbjct: 480 EMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGG 539
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+AA +EV V +++ A K RL+ + + + + P+ +
Sbjct: 540 NVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIF 599
Query: 548 LSLINGYVTAEQYFSVLMMWHEIKR 572
S+++ Y Y ++ IKR
Sbjct: 600 NSMLSIYAKNGMYSKATEVFDSIKR 624
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 108/272 (39%), Gaps = 50/272 (18%)
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+ A +EP G +I+AC GL D+A + +++ A G + + Y L+ +
Sbjct: 236 MRAAGVEPDGFTAST-----VIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVF 290
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
K EA +++ ++ +G Q D Y+ L + F+ A AR D
Sbjct: 291 GKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEA---------ARCLDTM 341
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
S GL+ N AF +N+++ A+ G++++A
Sbjct: 342 AS-----KGLLPN-------AF---------------TYNTVMTAYGNVGKVDEALALFD 374
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM-MWHEIKRKISTDGQKGIKFEHNLVDAF 592
+M F PN TY +L+ G + + F+V++ M E+ R G +
Sbjct: 375 QMKKTGFVPNVNTY-NLVLGMLGKKSRFTVMLEMLGEMSR-------SGCTPNRVTWNTM 426
Query: 593 LYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
L K G D V +V+E + V + + Y
Sbjct: 427 LAVCGKRGMEDYVTRVLEGMRSCGVELSRDTY 458
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 10/208 (4%)
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
E + + G P+ F + +YA G+ K E+ + G S ++ Y+SL+
Sbjct: 581 ETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDM 640
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE--AQK 358
Y K A + IL L + D +Y V+ GF + G VK ++ E A
Sbjct: 641 YAKCSESWEAEK-ILNQLKCSQTMKPDVV--SYNTVINGFCKQGLVKEAQRVLSEMVADG 697
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+ P + VG +L + +A ++ M G Y +++YC+ R
Sbjct: 698 MAPCAVTYHTLVG-----GYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKR 752
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIE 446
EA + ++S + L D +A IE
Sbjct: 753 FEEARGFLSEVSETDLDFDKKALEAYIE 780
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 162/420 (38%), Gaps = 67/420 (15%)
Query: 195 VAFLKVFEECCRIAL-DENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIE 245
V + ++ C +L +E +DF+ PN+ L GC Q + ++++
Sbjct: 300 VIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQ-LGRCKRILS 358
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV--- 302
M G P+ F L + Y G +L M + G V Y+ LI G
Sbjct: 359 MMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE 418
Query: 303 ---KLGNLESASRT------------------ILLCLGGGNMEQSDFS------------ 329
L LE A + + CL G + +S
Sbjct: 419 KLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP 478
Query: 330 -KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY +V+ G L N + A L+ E K + +V D +I + +GL +A
Sbjct: 479 DTSTYSKVI-GLLCNASKVDNAFLLFEEMK--SNHVVPDVFTYTILIDSFCKVGLLQQAR 535
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
DEM GC+ + Y + AY K + + A +L + S G +V Y ALI+
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595
Query: 449 ITSQDFQSAFSLFRDMR-EARIYDLKG---------------SYLTIMTGLMENHRPELM 492
S + A ++ MR A I D+ +Y ++ GL + H+ +
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
LD V+ E ++++I FCK G+L++A+ +M + PN TY SLI+
Sbjct: 656 RDLLD-VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 120/311 (38%), Gaps = 46/311 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PNI+ A ++G C V +A +++ MSV G PN + L + G ++
Sbjct: 634 PNIFTYGALVDGLCKA-HKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ + M+E G+ + YSSLI K L+ A + V+
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK-----------------------VL 729
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
L+N N+II + +I +G +D+A+ ++ M
Sbjct: 730 SRMLENSCA---PNVIIYTE----------------MIDGLCKVGKTDEAYRLMSMMEEK 770
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC + Y + + K + + +L+ + + G + Y LI + A
Sbjct: 771 GCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDA 830
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
L +M++ Y ++ G N + LDE+ E+ V + + +I
Sbjct: 831 HQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPI-IPAYRILID 887
Query: 518 AFCKAGRLEDA 528
+FCKAGRLE A
Sbjct: 888 SFCKAGRLELA 898
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 103/492 (20%), Positives = 188/492 (38%), Gaps = 62/492 (12%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIE 134
+H + + A+K K + P V N LI + N K V+ + E
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICG-----NEKLPSLDVLELAE 430
Query: 135 KN-PKLLDFQTVHTLLGSMRNANTA---------APAFALVKCMFKNRYFMPFELWGGFL 184
K ++LD H +L + +N A A+++++ M + + +
Sbjct: 431 KAYGEMLD---AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI 487
Query: 185 VDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCC-YGLQSVSDAEKV 243
+C + AFL +FEE + + P+++ ++ C GL + A K
Sbjct: 488 GLLCNASKVDNAFL-LFEE-------MKSNHVVPDVFTYTILIDSFCKVGL--LQQARKW 537
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+ M G PN ++ L + Y EL +M G +V Y++LI G+ K
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV---KGLANLIIEAQKLE 360
G +E A + G ++ D Y ++ G +++ N+ L + + +A K++
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDM----YFKIDDGNIRDPNIFTYGALVDGLCKAHKVK 653
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
+A +LD M+ GC VY + +CK +
Sbjct: 654 -------------------------EARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLD 688
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
EA + +S G +V Y +LI+ + A + M E Y ++
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL + + + A L ++E+ + ++I F KAG+++ +R+M
Sbjct: 749 DGLCKVGKTD-EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807
Query: 541 EPNDQTYLSLIN 552
PN TY LIN
Sbjct: 808 APNFVTYRVLIN 819
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 114/294 (38%), Gaps = 24/294 (8%)
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
E +L+ + F V Y+ +ISG + E A + M S TY
Sbjct: 285 EALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFL------SRMRSSSCIPNVVTYR 338
Query: 335 EVVKGFL---QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ G L Q G K + +++I G R + +I A G A+ +L
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMI------TEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG------NYDALI 445
+M CGC G VY + C + L + + G LD N L
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ F+ A+S+ R+M +Y ++ GL+ N A L E ++ V
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI-GLLCNASKVDNAFLLFEEMKSNHV 511
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ +I +FCK G L+ A++ M+ PN TY +LI+ Y+ A +
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 131/341 (38%), Gaps = 45/341 (13%)
Query: 276 VELESL--MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
V LE L + + G+ + Y++L+ +++ L++A + E SD
Sbjct: 215 VALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLV--------HREMSD------ 260
Query: 334 CEVVKGFLQNGNVKG-LANLIIEAQK-------LEPSGIVVDRSVGFGIISACVNLGLSD 385
GF +G G +L+ +A + +E +D + +IS L +
Sbjct: 261 ----SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFE 316
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A L M + C + Y L ++ + +++ + + G +++LI
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVE--- 501
A S D+ A+ L + M + Y ++ G+ N + P L L E
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEM 436
Query: 502 -DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
D V + + +++ C AG+ E A +R M+ F P+ TY +I A +
Sbjct: 437 LDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKV 496
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
+ +++ E+K H + D F Y ++ F
Sbjct: 497 DNAFLLFEEMKSN------------HVVPDVFTYTILIDSF 525
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 141/343 (41%), Gaps = 19/343 (5%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ + L G C+ + DA + + + +G +PN ++ L V
Sbjct: 150 EPDLVTFTSLLNGYCH-WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
EL + M G +V Y++L++G ++G A+ + +M + T+
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL------RDMMKRRIEPNVITFT 262
Query: 335 EVVKGFLQNGNV---KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ F++ G + K L N++I+ + D +I+ GL D+A +
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMS------VYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
M GC +Y + +CK R + ++ ++S G+ + Y LI+
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
A +F M R +Y ++ GL N + E A + E + +++
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE-KALMIFEYMRKREMDINIVT 435
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ II CK G++EDA + +PN TY ++I+G+
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 78/181 (43%), Gaps = 2/181 (1%)
Query: 374 IISACVNLGLSD-KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
I+ CV L +A L +M G L + L YC +R +A L I
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G + +V Y LI ++ A LF M +Y ++TGL E R
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
A L ++++ R+E + ++I AF K G+L +AK MI + P+ TY SLIN
Sbjct: 243 AWLLRDMMKR-RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 553 G 553
G
Sbjct: 302 G 302
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 128/331 (38%), Gaps = 8/331 (2%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+ E M +LG+ P + + + L + M + GF +V ++SL++GY
Sbjct: 105 LFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC 164
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
+E A LG G TY +++ +N ++ L ++ +
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNV----VTYTTLIRCLCKNRHLNHAVELF---NQMGTN 217
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G + +++ +G A +L +M + + + A+ K + EA
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+L + + DV Y +LI A +F M Y + Y T++ G
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
++ R E E+ + V T + +I +C GR + A+ +M + P
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKG-VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP 396
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ +TY L++G + LM++ ++++
Sbjct: 397 DIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 125/317 (39%), Gaps = 26/317 (8%)
Query: 163 ALVKCMFKNRYF-MPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENL-----DFM 216
L++C+ KNR+ EL+ + R N V + + C I + D M
Sbjct: 193 TLIRCLCKNRHLNHAVELFNQMGTNGSR--PNVVTYNALVTGLCEIGRWGDAAWLLRDMM 250
Query: 217 K----PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
K PN+ A ++ + + +A+++ M + V P+ ++G L + GL
Sbjct: 251 KRRIEPNVITFTALIDAF-VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
++ ++ LM G V Y++LI G+ K +E + M Q T
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY------EMSQKGVVANT 363
Query: 333 --YCEVVKGFLQNGNVKGLANLIIE-AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
Y +++G+ G + + + + P I R+ + C N G +KA
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI---RTYNVLLDGLCCN-GKVEKALM 419
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
I + M + + Y ++ CK + +A L + S G++ +V Y +I
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 479
Query: 450 TSQDFQSAFSLFRDMRE 466
A SLF+ M+E
Sbjct: 480 RRGLIHEADSLFKKMKE 496
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 153/405 (37%), Gaps = 68/405 (16%)
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT 313
P+E +G + KG +K +L LM + Y+ +I + K G L+ A+
Sbjct: 176 PDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSL 235
Query: 314 ILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
+ M+Q + + TY ++ G + + + L +E L I D
Sbjct: 236 L------NEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHL---NIYPDVCTF 286
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
+I G + A I+ M G Y + YC + A ++ +
Sbjct: 287 NSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMID 346
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT---IMTGLMENHR 488
G++ D+ +Y ALI + + A LFR++ + LK S +T ++ GL E R
Sbjct: 347 KGIEPDIISYTALINGYVEKKKMDKAMQLFREISQN---GLKPSIVTCSVLLRGLFEVGR 403
Query: 489 PELMAAFLDEV----------------------------------VEDPRVEVKTHDWNS 514
E F DE+ +E R + + +
Sbjct: 404 TECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTA 463
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+I+ CK G+L+ A T ++ + P+ TY ++I+GY +L ++ RK+
Sbjct: 464 VINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE----GLLDEAKDMLRKM 519
Query: 575 STDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFV 619
+G L D Y ++ GFF + K EMK F+
Sbjct: 520 EDNG--------CLPDNRTYNVIVRGFFRS-----SKVSEMKAFL 551
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 110/246 (44%), Gaps = 5/246 (2%)
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDK 386
+++ T+ +++G VK +L +KL I V +G ++ G + K
Sbjct: 140 YNEVTFTTLIRGLFAENKVKDAVHLF---KKLVRENICEPDEVMYGTVMDGLCKKGHTQK 196
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A +L M +Y + A+CK+ AT L+ ++ + D+ Y +LI+
Sbjct: 197 AFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLID 256
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
++ +LF +M IY ++ +++ GL + + E + ++E VE
Sbjct: 257 GLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKG-VE 315
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+N ++ +C G++ A+R MI EP+ +Y +LINGYV ++ + +
Sbjct: 316 PNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQL 375
Query: 567 WHEIKR 572
+ EI +
Sbjct: 376 FREISQ 381
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 117/262 (44%), Gaps = 37/262 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N+ ++G C V DAE+++ M GV PNE ++ + Y L+G +
Sbjct: 281 PDVCTFNSVIDGLCKE-GKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARR 339
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR------------TILLC---LGG-- 320
+ M + G ++ Y++LI+GYV+ ++ A + +I+ C L G
Sbjct: 340 IFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLF 399
Query: 321 --GNMEQSD-FSKE-----------TYCEVVKGFLQNGNV-KGLANLIIEAQKLEPSGIV 365
G E + F E T+C ++ G+ +NG V + +++ ++ E + I
Sbjct: 400 EVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQ 459
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+ +V G+ C N G DKAH+ +++ G + Y + YC+E EA +
Sbjct: 460 IYTAVINGL---CKN-GKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDM 515
Query: 426 VMDISSSGLQLDVGNYDALIEA 447
+ + +G D Y+ ++
Sbjct: 516 LRKMEDNGCLPDNRTYNVIVRG 537
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 132/310 (42%), Gaps = 14/310 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ NA ++ C G ++ + M GV+P+ +F L + + GL E
Sbjct: 256 LMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAA 315
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
L S M + G + Y++L+ K G ++ A + M + TY
Sbjct: 316 RRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIM------SEMPTKNILPNVVTY 369
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G+ + G + N+ E + L G+ +DR ++S LG ++A + E
Sbjct: 370 STMIDGYAKVGRLDDALNMFNEMKFL---GVGLDRVSYNTLLSVYAKLGRFEQALDVCKE 426
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G + Y L Y K++R E ++ ++ + ++ Y LI+
Sbjct: 427 MENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGL 486
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV-EDPRVEVKTHDW 512
++ A +FR+ ++A + Y ++ L +N E LDE+ E R V T +
Sbjct: 487 YKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVT--Y 544
Query: 513 NSIIHAFCKA 522
NSII AF ++
Sbjct: 545 NSIIDAFGRS 554
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 122/282 (43%), Gaps = 20/282 (7%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+IS LG + A ++ D G + + + AY + EA ++ + S+G
Sbjct: 196 MISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNG 255
Query: 434 LQLDVGNYDALIEA-SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT-----GLMENH 487
L ++ Y+A+I+A +F+ +F M + + ++ +++ GL E
Sbjct: 256 LMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAA 315
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
R L +A +D+ ++ +N+++ A CK G+++ A + M PN TY
Sbjct: 316 R-RLFSAMVDKGIDQ-----DIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTY 369
Query: 548 LSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQ 607
++I+GY + L M++E+K G+ + + L K G F+ +
Sbjct: 370 STMIDGYAKVGRLDDALNMFNEMKF-------LGVGLDRVSYNTLLSVYAKLGRFEQALD 422
Query: 608 VVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKME 649
V ++ + + D Y K+ + ++R R F++M+
Sbjct: 423 VCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVR-RVFEEMK 463
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 138/332 (41%), Gaps = 20/332 (6%)
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFS---KETYCEVVKGFLQNGNVKGLANLIIE 355
SG + G L SA + L LG + ++ F KE Y + V F + G + E
Sbjct: 184 SGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNE 243
Query: 356 AQK----LEPSGIVVDRSVGFGIISACVNLGLS-DKAHSILDEMNACGCSVGLGVYVPTL 410
A K ++ +G++ + +I AC G+ K I D M + G + +L
Sbjct: 244 AIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDR-ITFNSL 302
Query: 411 KAYCKEHRTAEATQ-LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
A C EA + L + G+ D+ Y+ L++A AF + +M I
Sbjct: 303 LAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNI 362
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+Y T++ G + R + +E+ + V + +N+++ + K GR E A
Sbjct: 363 LPNVVTYSTMIDGYAKVGRLDDALNMFNEM-KFLGVGLDRVSYNTLLSVYAKLGRFEQAL 421
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR-KISTDGQKGIKFEHNL 588
+ M + TY +L+ GY +Y V ++ E+KR ++S + + L
Sbjct: 422 DVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPN----LLTYSTL 477
Query: 589 VDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
+D + KGG + M+V + ++ + D
Sbjct: 478 IDVY----SKGGLYKEAMEVFREFKQAGLKAD 505
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 8/285 (2%)
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
K L K VE+ M EFG +V Y++L+ Y K G ++ L L
Sbjct: 518 KDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQG----LDLLSEMQRRGCAP 573
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
+ TY ++ G + G + LI E K +G+ V +I N GL +A
Sbjct: 574 NDVTYNVLINGLSKKGEFEQAKGLIGEMLK---TGLKVSAYTYNPLIYGYFNKGLLAEAL 630
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
S+ +EM G S + Y + CK R ++A Q + D+ ++ L DV +Y+ LI
Sbjct: 631 SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGY 690
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ AF LF ++R ++ +Y T++ GL E+ E++ + +
Sbjct: 691 CRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG-IAPD 749
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ +++ CK G L A+ M+ E + Y + I G
Sbjct: 750 IVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG 794
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 77/192 (40%), Gaps = 7/192 (3%)
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
L KA + M G + Y L +YCK + + L+ ++ G + Y+
Sbjct: 520 LMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYN 579
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV-- 500
LI +F+ A L +M + + +Y ++ G + +E+V
Sbjct: 580 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLK 639
Query: 501 -EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
P V +NS I+ CK GR+ DA + L M+ P+ +Y +LI GY
Sbjct: 640 GASPTVAT----YNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGN 695
Query: 560 YFSVLMMWHEIK 571
+++ E++
Sbjct: 696 LMKAFLLFDELR 707
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 129/323 (39%), Gaps = 17/323 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP I N L+ C G V ++ M G PN+ ++ L + KG E+
Sbjct: 536 IKPTIVTYNTLLDSYCKG-GKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 594
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNL-ESASRTILLCLGGGNMEQSDFSKETYC 334
L M + G Y+ LI GY G L E+ S + L G + + ++ Y
Sbjct: 595 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYG 654
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
G + + ++ L++++ A L P + + +I LG KA + DE+
Sbjct: 655 LCKLGRMSDA-MQQLSDML--ANNLLPDVVSYNT-----LIYGYCRLGNLMKAFLLFDEL 706
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ + Y L C++ A QL +++ + G+ D+ Y L+ S
Sbjct: 707 RSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSL 766
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHD 511
A F +M + +Y T + G ++ + +E++ P + +
Sbjct: 767 SMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLII---- 822
Query: 512 WNSIIHAFCKAGRLEDAKRTLRR 534
+N ++ CK G LE+A L++
Sbjct: 823 YNVVVDGLCKLGNLEEASELLQK 845
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 149/392 (38%), Gaps = 49/392 (12%)
Query: 202 EECCRIALDENLDFMKP-NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
EE ++ DE + F P ++ A + + G C G + A M G+ P++ F
Sbjct: 327 EEAVKVK-DEMVGFGIPMSVIAATSLITGFCNG-NELGKALDFFNRMEEEGLAPDKVMFS 384
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
+ + EK VE+ M G + V +I G +K + E+A
Sbjct: 385 VMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAA---------- 434
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
+E + S ET+ + GF+ N I
Sbjct: 435 --LEIFNDSFETW--IAHGFMCNK-----------------------------IFLLLCK 461
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGN 440
G D A S L M G + Y + A+C+ A + ++ GLQ +
Sbjct: 462 QGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFT 521
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
Y LI+ +QD Q+A+ + M + + Y TI+ GL + + L ++
Sbjct: 522 YSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
++ R + +NSII F K G + A R M PN T+ SLING+ + +
Sbjct: 582 KEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRM 641
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLVDAF 592
L M HE+K K D + + L+D F
Sbjct: 642 DLALEMIHEMKSK---DLKLDVPAYGALIDGF 670
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 150/363 (41%), Gaps = 47/363 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN+ N + C ++++ A + M G++PN ++ L + ++
Sbjct: 480 IEPNVVFYNNMMLAHCR-MKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNA 538
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK--ETY 333
E+ + M F + V Y+++I+G K+G S ++ +L L +++ +S +Y
Sbjct: 539 WEVINQMIASNFEANEVIYNTIINGLCKVGQ-TSKAKEMLQNL----IKEKRYSMGCTSY 593
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ GF + G+ +D A E
Sbjct: 594 NSIIDGFFKEGD--------------------------------------TDSAVEAYRE 615
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M+ G S + + + +CK +R A +++ ++ S L+LDV Y ALI+ D
Sbjct: 616 MSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKND 675
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
++A++LF ++ E + Y +++G + + ++V D + +
Sbjct: 676 MKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVND-GISCDLFTYT 734
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++I K G L A ++ L P++ Y+ L+NG Q+ M E+K+K
Sbjct: 735 TMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKK 794
Query: 574 IST 576
+T
Sbjct: 795 DAT 797
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 20/246 (8%)
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
E G+ + +I ACV G ++A + DEM G + + + +C +
Sbjct: 302 EKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNEL 361
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
+A + GL D + +IE + + + A +++ M+ I +
Sbjct: 362 GKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKM 421
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW--NSIIHAFCKAGRLEDAKRTLRRMIF 537
+ G ++ PE AA E+ D H + N I CK G+++ A LR M
Sbjct: 422 IQGCLKAESPE--AAL--EIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMEN 477
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG-QKGIKFEHNLVDAFLYAL 596
EPN Y +++ + M ++ R I ++ +KG++ + F Y++
Sbjct: 478 KGIEPNVVFYNNMMLAHCR--------MKNMDLARSIFSEMLEKGLQ-----PNNFTYSI 524
Query: 597 VKGGFF 602
+ GFF
Sbjct: 525 LIDGFF 530
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 102/234 (43%), Gaps = 8/234 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ + + G C + A ++I M ++ + ++G L + K +
Sbjct: 621 ISPNVVTFTSLINGFCKS-NRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTA 679
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L S + E G + Y++LISG+ LG +++A + G + F TY
Sbjct: 680 YTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDG-ISCDLF---TYTT 735
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G L++GN+ ++L E L GIV D + +++ G +A +L+EM
Sbjct: 736 MIDGLLKDGNLILASDLYSELLAL---GIVPDEILYVVLVNGLSKKGQFVRASKMLEEMK 792
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ + +Y + + +E EA ++ ++ GL D ++ L+ +
Sbjct: 793 KKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGRV 846
>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12300, mitochondrial-like [Glycine max]
Length = 450
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 137/310 (44%), Gaps = 25/310 (8%)
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG-NLESASRTIL---LC 317
L++ LKG+Q L LMN F Q+ F S+++ +K G + + T L LC
Sbjct: 92 LSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLC 151
Query: 318 LGGGN-----------MEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGI 364
L G + F + +Y ++ G + G+ +G L+ I+ + +P+
Sbjct: 152 LKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVE 211
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ + II A L +A+ + EM A G S + Y +K +CK EA
Sbjct: 212 MYNT-----IIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALN 266
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
L ++ + + Y +L++ S + L +M + I +Y +++ GL
Sbjct: 267 LFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLC 326
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
+N + A +++ +D R + T + ++ CK GRL+DA+ + ++ +++ +
Sbjct: 327 KNGHLDRAIALFNKM-KDXRFDRLT--FTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDV 383
Query: 545 QTYLSLINGY 554
Y +INGY
Sbjct: 384 YPYNVMINGY 393
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/421 (20%), Positives = 172/421 (40%), Gaps = 24/421 (5%)
Query: 151 SMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALD 210
S++N + A F + CM R+ P + L + A +K + ++
Sbjct: 47 SIQNVDDAVSQFNSMLCM---RHTPPVIQFNKIL--------DSFAXMKHYSTAVSLSHR 95
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
L ++P+ + N + C+ + ++ V+ + G +P+ +F L LKG
Sbjct: 96 LELKGIQPDFFTLNILMNCFCH-MGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKG 154
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
K + + G V Y +LI+G K+G+ A + + G + + +
Sbjct: 155 QVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKI--DGRLTKPNV-- 210
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
E Y ++ + V L E S VV ++ +I + D+A ++
Sbjct: 211 EMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNI---MIKGFCKSKMVDEALNL 267
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
EM+ + Y + CK R + +L+ ++ G+ DV Y++LI+
Sbjct: 268 FKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCK 327
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKT 509
+ A +LF M++ R L ++ ++ GL + R + F D + ++ ++V
Sbjct: 328 NGHLDRAIALFNKMKDXRFDRL--TFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDV-- 383
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+ +N +I+ +CK G LE+A +M P+ T+ +IN ++ + HE
Sbjct: 384 YPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHE 443
Query: 570 I 570
+
Sbjct: 444 M 444
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 168/440 (38%), Gaps = 59/440 (13%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T +TL+G A AF L+ M K R P + +V N ++ F E
Sbjct: 107 TYNTLIGGFCKAGDMERAFQLLAEM-KERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE 165
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
A P+ N + G C Q +S+A ++IE MS G+ P+ ++ L
Sbjct: 166 SVECA---------PDSVLFNILVHGLCKANQ-LSEARQMIEEMSERGIVPDVVTYNSLI 215
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
E+ +L M + +V Y++LI GY K G
Sbjct: 216 DGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTG------------------ 257
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
GLA+ +IE ++ SG D +IS
Sbjct: 258 ----------------------CTGLAHQLIE--RMIQSGTHPDVVTFNSLISGFCQKSK 293
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
DKA +L M C+ L Y + C R EA +L+ ++ G+ D+ Y++
Sbjct: 294 IDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNS 353
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
LI + + AF + M E + SY T+ L+++ R + A LD + +
Sbjct: 354 LIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAG 413
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY--- 560
+ +NS++ C + RL++A+ L M + +P TY L+ G A +
Sbjct: 414 AIP-NLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDA 472
Query: 561 --FSVLMMWHEIKRKISTDG 578
V+M+ I+ +S+ G
Sbjct: 473 KEVLVMMVSEGIQPLVSSSG 492
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
DE+ C Y + +CK A QL+ ++ G DV + ++++A +
Sbjct: 94 DELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNT 153
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-EVKTH 510
+ A FR+ E + + ++ GL + ++ ++E+ E V +V T
Sbjct: 154 GNLSRAMQYFRESVECAPDSVL--FNILVHGLCKANQLSEARQMIEEMSERGIVPDVVT- 210
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+NS+I CK+ R+E+A++ L M+ + PN TY +LI GY
Sbjct: 211 -YNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGY 253
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 123/313 (39%), Gaps = 24/313 (7%)
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
N ++ L + G E+ +L + M E G S +V +SS++ GNL A +
Sbjct: 104 NHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQY- 162
Query: 315 LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL--ANLIIEA----QKLEPSGIVVDR 368
F + C L N V GL AN + EA +++ GIV D
Sbjct: 163 -------------FRESVEC-APDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDV 208
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+I ++A +L+ M L Y + YCK T A QL+
Sbjct: 209 VTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIER 268
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ SG DV +++LI A + M++ +Y +++GL + R
Sbjct: 269 MIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGR 328
Query: 489 PELMAAFLDEVVEDPR-VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
L E+ D R + +NS+I FC+ ++E A + M+ P+ +Y
Sbjct: 329 ANEACELLSEM--DGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISY 386
Query: 548 LSLINGYVTAEQY 560
+L + +E++
Sbjct: 387 CTLAVALLKSERF 399
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 143/350 (40%), Gaps = 15/350 (4%)
Query: 210 DENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALK 269
D +L + P+ + ++ G C+ Q + +A + +E M G+ P+ +F + Y+
Sbjct: 443 DWSLSSLVPDCSLYDVSVAGLCWAGQ-LDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRA 501
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
G ++ + +M FG SS++ G K G L+ A + + G +
Sbjct: 502 GFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKG----LPVN 557
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
K + ++ G+ + G+ G +L E +E GI D I GL ++A+
Sbjct: 558 KVAFTVLLDGYFKVGDTAGAHSLWYE---MEARGICPDAIAFSAFIDGLSKAGLVEEAYE 614
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
EM+ G VY + C + EA +L ++ GL D+ + +I
Sbjct: 615 AFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFC 674
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVE 506
+SAF F +M + +Y T++ G + FL+++ DP +
Sbjct: 675 KEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDIT 734
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+N I FC + ++ A L +I + PN TY +++N T
Sbjct: 735 T----YNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCT 780
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 95/467 (20%), Positives = 169/467 (36%), Gaps = 89/467 (19%)
Query: 124 RAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGF 183
R S+++V+ K D + L+ + R + A + M KN +
Sbjct: 295 RVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTI 354
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
+ C + N V K+FE + L PN+ N + G + + V A +
Sbjct: 355 ITAFCNEG-NVVEARKIFEGIQEVGLS-------PNVAMYNTLMSGY-FKARDVCQANML 405
Query: 244 IETMSVLGVRPNESSFGFLA------------------------------YLYALKGL-- 271
E M G+ P+ ++F L Y ++ GL
Sbjct: 406 YEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCW 465
Query: 272 ----QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
E + LE ++ E G +V ++S+I+ Y + G ++A + + L G + S
Sbjct: 466 AGQLDEAMQFLEDML-EKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSS- 523
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
T ++ G + G ++ +L+ K+ G+ V++ ++ +G + A
Sbjct: 524 ---STCSSMLLGLSKKGRLQEARDLL---YKMIDKGLPVNKVAFTVLLDGYFKVGDTAGA 577
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
HS+ EM A G + + K EA + ++S G + Y++LI
Sbjct: 578 HSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHG 637
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
A L R+MR+ GL+ P++
Sbjct: 638 LCNCGKLHEALKLEREMRQ--------------KGLL----PDIFTT------------- 666
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
N II+ FCK GR++ A M + P+ TY +LI GY
Sbjct: 667 -----NIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGY 708
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 144/366 (39%), Gaps = 49/366 (13%)
Query: 204 CCRIALDENLDF--------MKPNIYACNAALEGCCYGLQSVSD-AEKVIETMSVLGVRP 254
C LDE + F M P++ A N+ + Y D A K + M + G+ P
Sbjct: 464 CWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAA--YSRAGFEDNAHKAYKIMLMFGLVP 521
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA---- 310
+ S+ + + KG ++ +L M + G V ++ L+ GY K+G+ A
Sbjct: 522 SSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLW 581
Query: 311 ---------------SRTILLCLGGGNMEQ-----SDFSKETYCEVVKGFLQNGNVKGLA 350
S I G +E+ S+ SK+ + V F+ N + GL
Sbjct: 582 YEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGF--VPNNFVYNSLIHGLC 639
Query: 351 NL--IIEAQKLE----PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
N + EA KLE G++ D II+ G A EM+ G +
Sbjct: 640 NCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTV 699
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y + YCK A + + + +SG D+ Y+ I+ +SQ A ++ ++
Sbjct: 700 TYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDEL 759
Query: 465 REARIYDLKGSYLTIMTGLMEN--HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKA 522
+ +Y T+M + + R ++ A L ++ P V V T N ++ FCK
Sbjct: 760 IAVGVVPNTVTYNTMMNAVCTDMLDRAMVLTAKLLKMAFVPNV-VTT---NVLLSHFCKQ 815
Query: 523 GRLEDA 528
G E A
Sbjct: 816 GMPEKA 821
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 148/397 (37%), Gaps = 50/397 (12%)
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
+++ M +GVRP+ S+ L L G + +L M G ++ +I +
Sbjct: 229 EILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCF 288
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
+ G L A ++L + E ++ + + + G +L+I+ +P
Sbjct: 289 CQKGYLRVA-ESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIK-NGCKP 346
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
S I II+A N G +A I + + G S + +Y + Y K +
Sbjct: 347 SLITFST-----IITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQ 401
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD------MREARIYDLKGS 475
A L ++ G+ D ++ L+ + ++ LFRD + + +YD+ +
Sbjct: 402 ANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVA 461
Query: 476 YLT----------IMTGLMENHRPELMAAFLDEVVEDPRV--EVKTHD------------ 511
L + ++E P + AF + R E H
Sbjct: 462 GLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVP 521
Query: 512 ----WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+S++ K GRL++A+ L +MI N + L++GY +W
Sbjct: 522 SSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLW 581
Query: 568 HEIK-RKISTDGQKGIKFEHNLVDAFLYALVKGGFFD 603
+E++ R I D I F AF+ L K G +
Sbjct: 582 YEMEARGICPD---AIAFS-----AFIDGLSKAGLVE 610
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 152/390 (38%), Gaps = 32/390 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P + N + G + +V A M +G+ P+ ++ L Y G ++ +
Sbjct: 335 PTVVTYNTIIHGM-FRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALW 393
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L + G + ++ Y+ L+ GY +LG+LE A R + G Q D S TY ++
Sbjct: 394 LFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGC--QPDVS--TYTILM 449
Query: 338 KGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
G + N+ + E ++ L+P + ISA + LG + +A + + M
Sbjct: 450 NGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTR-----ISAELILGSTSEAFQLTEVMI 504
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ G S Y L CK +A L M + S GLQ D Y LI A +
Sbjct: 505 SRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLR 564
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF------LDEVVEDPRVEVKT 509
A +F M + + +Y + R L +A+ L+E V V
Sbjct: 565 EARDIFDGMLVSGLPPSAVTYTVFIHAYCR--RGNLYSAYGWFQKMLEEGVRPNEV---- 618
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+N +IHA C+ GR A + M+ PN TY LI+G W E
Sbjct: 619 -TYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGN-------WEE 670
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKG 599
R S Q GI +H +A +G
Sbjct: 671 AIRLYSEMHQHGIHPDHCTHNALFKGFDEG 700
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 134/353 (37%), Gaps = 46/353 (13%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL--ESLMNEFGFSSQMVFYSS 296
D V M LG+ P+ ++ L + +G ++ +L E G V Y+
Sbjct: 214 DMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNV 273
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSD-FSKETYCEVVKGFLQNGNVKGLANLIIE 355
+I+G + G LE A++ + M S S T+ ++ G+ G+V+ L +E
Sbjct: 274 VINGLARKGELEKAAQLV------DRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLE 327
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
+E GIV II G + A EM A G L Y + YCK
Sbjct: 328 ---MENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCK 384
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
EA L D+ +GL V Y+ L++ D + A ++M E +
Sbjct: 385 AGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVST 444
Query: 476 YLTIMTG-----------------LMENHRPELMA----------------AF-LDEVVE 501
Y +M G L + +P+ A AF L EV+
Sbjct: 445 YTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMI 504
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ T +N + CK+G L+DA +M+ +P+ TY LI+ +
Sbjct: 505 SRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAH 557
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 151/376 (40%), Gaps = 22/376 (5%)
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
K L K VE+ M EFG +V Y++L+ Y K G ++ + M++
Sbjct: 212 KDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLL------SEMQRRGC 265
Query: 329 SKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
+ TY ++ G + G + LI E K +G+ V +I N G+ +
Sbjct: 266 APNDVTYNVLINGLSKKGEFEQAKGLIGEMLK---TGLKVSAYTYNPLIYGYFNKGMLAE 322
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A S+ +EM G S + Y + CK R ++A Q + D+ ++ L DV +Y+ LI
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ AF LF ++R ++ +Y T++ GL E+ E++ + +
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG-IA 441
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+ +++ CK G L A+ M+ E + Y + I G + +
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ 626
E+ KG + + + + L K G + ++++K V D Y
Sbjct: 502 QEEML-------AKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554
Query: 627 AFMENHKKLKVAKLRK 642
H L+ +LRK
Sbjct: 555 II---HAHLENGRLRK 567
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 143/336 (42%), Gaps = 11/336 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA-LKGLQEKIV 276
P + N+ + G C L +SDA + + M + P+ S+ L Y Y L L + +
Sbjct: 337 PTVATYNSFIYGLC-KLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 395
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+ L + + F + +V Y++L+ G + G LE A + + + G TY +
Sbjct: 396 LFDELRSIYLFPT-IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDI----VTYTIL 450
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V G + G++ E + G+ +D I + LG + +A S+ +EM A
Sbjct: 451 VNGSCKMGSLSMAQEFFDE---MLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLA 507
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G L +Y + CK EA++L+ + S G+ D Y ++I A + + +
Sbjct: 508 KGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRK 567
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
+F +M + +Y ++ G R E + E +++ + +NS+I
Sbjct: 568 GREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSE-MQEKGILPNVITYNSLI 626
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+ CK R++ A M+ PN +Y LIN
Sbjct: 627 NGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 156/394 (39%), Gaps = 19/394 (4%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A+ +I M G++ + ++ L Y Y KG+ + + L+ M G S + Y+S I
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
G KLG + A + + +M ++ + +Y ++ G+ + GN+ L E +
Sbjct: 348 GLCKLGRMSDAMQQL------SDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR 401
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ +V + ++ G + A + EM G + + Y + CK
Sbjct: 402 SIYLFPTIVTYNT---LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMG 458
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+ A + ++ GL+LD Y I + D AFSL +M Y
Sbjct: 459 SLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYN 518
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++ GL + E + L ++V D + + SIIHA + GRL + M+
Sbjct: 519 VVVDGLCKLGNLEEASELLQKMVSDGVIPDYV-TYTSIIHAHLENGRLRKGREIFYEMLS 577
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALV 597
P+ TY LI+G+ + + + E++ +KGI ++ + L
Sbjct: 578 KGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ-------EKGILPNVITYNSLINGLC 630
Query: 598 KGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMEN 631
K D + E +F +K+ Y EN
Sbjct: 631 KVRRMDQAYNFFAEMVEKGIFPNKYSYTILINEN 664
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 141/363 (38%), Gaps = 54/363 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETM-SVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P++ N ++G C + + V E M SV G PN ++ LA+ + G
Sbjct: 207 PDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMAC 266
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA------SRTILLCLGGGNMEQSDFSK 330
EL + M + + V ++++ G +G + +A RT+ ++ +
Sbjct: 267 ELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTV--------WPEARGNA 318
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY +V FL NV L E + G D + F +IS G D A S+
Sbjct: 319 VTYSTLVGAFLHTNNVGVAMELFHE---MVDEGNSPDAIMYFTMISGLTQAGRLDDAWSM 375
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
M G + Y + +C+ R EA +L+ ++ +GLQ DV Y+ L+
Sbjct: 376 ATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCK 435
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ DF + L M + RP ++
Sbjct: 436 AGDFLAVDELLGKMIDG------------------GCRPSVVT----------------- 460
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+ ++IH +CK G++++A R R M +PN Y +LI+ + + ++ E+
Sbjct: 461 -FGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEM 519
Query: 571 KRK 573
+ K
Sbjct: 520 REK 522
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 11/228 (4%)
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETY 333
+EL M + G S + Y ++ISG + G L+ A +M+++ F + Y
Sbjct: 338 MELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSM------ATSMKKAGFQLDAKAY 391
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ GF + + L+ E ++ +G+ D ++S G +L +
Sbjct: 392 NILIGGFCRRKRLNEAYELLGEMKE---AGLQPDVYTYNTLLSGLCKAGDFLAVDELLGK 448
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M GC + + + YCK + EA ++ + SG+Q + Y+ LI+ S+D
Sbjct: 449 MIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRD 508
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
A LF +MRE + ++ ++ GL + + PE +D + E
Sbjct: 509 TSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMRE 556
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 26/206 (12%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKG 339
M + GF Y+ LI G+ + L A + G M+++ + TY ++ G
Sbjct: 379 MKKAGFQLDAKAYNILIGGFCRRKRLNEAYELL------GEMKEAGLQPDVYTYNTLLSG 432
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRS-----VGFG-IISACVNLGLSDKAHSILDE 393
+ G+ + L+ G ++D V FG +I +G D+A I
Sbjct: 433 LCKAGDFLAVDELL---------GKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRS 483
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M+ G +Y + CK T+ A +L ++ + +V ++AL++
Sbjct: 484 MDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNM 543
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTI 479
+ AF L MRE R Y+TI
Sbjct: 544 PEKAFELMDLMREGRCTP---DYVTI 566
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 150/361 (41%), Gaps = 50/361 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PNI+ N+ ++G C +A ++ M L + PN +F L ++ +G +
Sbjct: 293 ISPNIFTYNSLIQGLC-NFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEA 351
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ M E G +V YSSL++GY + A + + + G + FS Y
Sbjct: 352 RGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKG-CKPDVFS---YNI 407
Query: 336 VVKGFLQN---GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ G+ + G K L N +I Q L P + + +I LG +AH +
Sbjct: 408 LINGYCKAKRIGEAKQLFNEMIH-QGLTPDIVSYNT-----LIDGLCQLGRLREAHDLFK 461
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M G L Y L +CK+ A+A +L + S+ L+ ++ Y+ LI+A S+
Sbjct: 462 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR 521
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ + A LF ++ + GL P V++ +
Sbjct: 522 NLKEARKLFSEL--------------FVQGL------------------QPNVQI----Y 545
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+II+ CK G L++A R M PN+ +Y +I G++ + + + E++
Sbjct: 546 TTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRE 605
Query: 573 K 573
K
Sbjct: 606 K 606
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 161/379 (42%), Gaps = 25/379 (6%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+++ + G C ++V+ A + M G +P+ ++ + + +
Sbjct: 224 QPDVHTYTTIINGLCKIGETVA-AAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
++ S M G S + Y+SLI G AS + + M + T+ +
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP----NIVTFSLL 338
Query: 337 VKGFLQNGNV---KGLANLIIEAQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSILD 392
+ F + GNV +G+ + E +EP+ + + G+ + + V +A + D
Sbjct: 339 INIFCKEGNVFEARGVLKTMTE-MGVEPNVVTYSSLMNGYSLQAEVV------EARKLFD 391
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M GC + Y + YCK R EA QL ++ GL D+ +Y+ LI+
Sbjct: 392 VMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLG 451
Query: 453 DFQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTH 510
+ A LF++M + DL +Y ++ G + + L AF L ++ ++
Sbjct: 452 RLREAHDLFKNMLTNGNLPDL-CTYSILLDGFCK--QGYLAKAFRLFRAMQSTYLKPNMV 508
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+N +I A CK+ L++A++ + +PN Q Y ++ING +L E
Sbjct: 509 MYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKE----GLLDEALEA 564
Query: 571 KRKISTDGQKGIKFEHNLV 589
R + DG +F +N++
Sbjct: 565 FRNMEEDGCPPNEFSYNVI 583
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 42/251 (16%)
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
++++E +G+ D +I+ L D S+L ++ G + + + + CK
Sbjct: 145 SKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCK 204
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
+ +A +L D+ + G Q DV Y +I + +A LFR M EA +
Sbjct: 205 VGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVT 264
Query: 476 YLTIMTGLMENHR-----------------PELM------------------AAFLDEVV 500
Y TI+ L ++ R P + +A L+E++
Sbjct: 265 YSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMM 324
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY------ 554
+ ++ +I+ FCK G + +A+ L+ M + EPN TY SL+NGY
Sbjct: 325 S-LNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEV 383
Query: 555 VTAEQYFSVLM 565
V A + F V++
Sbjct: 384 VEARKLFDVMI 394
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 116/267 (43%), Gaps = 13/267 (4%)
Query: 308 ESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK-GLANLIIEAQKLEPSGIVV 366
E + ++LC E ++ + +VK +L+ G V+ GL + +++ G V
Sbjct: 216 EDVFKNLILC-----TEDCNWDPVVFDMLVKAYLRMGRVREGLRSF----RRMLRVGFVP 266
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+++ + L +D+ + +EM G + L + CK+ T + + +
Sbjct: 267 TVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFL 326
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLME 485
+ G D+ Y+ LI + AF L++ M R + DL SY +M GL +
Sbjct: 327 EKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLV-SYTALMNGLCK 385
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
R +V + +N++IH +CK G++++++ L MI+ P+
Sbjct: 386 EGRVREAHQLFHRMVHRG-LSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSF 444
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKR 572
T L+ GY ++ S L + E++R
Sbjct: 445 TCWVLVEGYGKEGKFLSALNLVVELQR 471
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 127/334 (38%), Gaps = 44/334 (13%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P + N L G L +V E M G+ PN +F L ++ G K+ +
Sbjct: 266 PTVITSNYLLNGL-LKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNK 324
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
M E GF +V Y++LI+ Y + G L+ A + G + +Y ++
Sbjct: 325 FLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPD----LVSYTALM 380
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + G V+ +AH + M
Sbjct: 381 NGLCKEGRVR--------------------------------------EAHQLFHRMVHR 402
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G S + Y + YCKE + E+ L+ D+ +G+ D L+E F SA
Sbjct: 403 GLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSA 462
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+L +++ + + Y ++ L +RP L+ + +D + + +N +I
Sbjct: 463 LNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGH-KXELEIYNELIK 521
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+FC+ + +A M+ + +PN TY ++J
Sbjct: 522 SFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJ 555
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 144/392 (36%), Gaps = 25/392 (6%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIE 134
L+ L N TD W+ ++ + + P+ N L L D + + +E
Sbjct: 275 LNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEK----ME 330
Query: 135 KNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNF 194
+ D T +TL+ S AF L K M++ + + +C++
Sbjct: 331 EEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVR 390
Query: 195 VAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
A ++F L P+I N + G C + ++ ++ M G+ P
Sbjct: 391 EAH-QLFHRMVHRGL-------SPDIVTYNTLIHGYCKE-GKMQESRSLLHDMIWNGISP 441
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
+ + L Y +G + L + FG S YS LI + N A++ +
Sbjct: 442 DSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCR-ENRPFAAKNL 500
Query: 315 LLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
L M Q E Y E++K F Q +A ++ ++ I + +
Sbjct: 501 L-----ERMSQDGHKXELEIYNELIKSFCQ---CDCIAEALLLKMEMVDKEIKPNLATYR 552
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
+J L S + S++ EM A G L + YC+E+ +A L+ +
Sbjct: 553 AVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKE 612
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
D +++ALI + D + + +DM
Sbjct: 613 FQIHDTESFNALIRITSAKGDIARSLEI-QDM 643
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 129/317 (40%), Gaps = 18/317 (5%)
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
+ +E + G++ + +F L +Y GL +K +E M +F + + Y+ ++
Sbjct: 112 QTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVL 171
Query: 302 VK----LGNLESASRTILL-CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
++ L L +R + L CL + T+ ++ G ++GNVK +L E
Sbjct: 172 IQKNFLLLALTVYTRMMKLNCLP---------NVATFSILIDGLCKSGNVKDALHLFDEM 222
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+ GI+ D +IS D A+ + D+M G L +C
Sbjct: 223 TQ---RGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCML 279
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R EA L+ G LDV Y LI ++ ++ L+R M E + Y
Sbjct: 280 DRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLY 339
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+M GL E + L+E+ E V T +N +I FC G L +A+ +
Sbjct: 340 TIMMKGLAEAGKVRDALELLNEMTESGVVP-DTVCYNVLIKGFCDMGLLSEARSLQLEIS 398
Query: 537 FLQFEPNDQTYLSLING 553
PN +TY LI+G
Sbjct: 399 RHDCFPNVKTYSILISG 415
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 155/391 (39%), Gaps = 45/391 (11%)
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKV 243
L+D K+ N L +F+E + + P+ + + G C + V DA ++
Sbjct: 202 LIDGLCKSGNVKDALHLFDEMTQRGI-------LPDAFTYCVVISGLCRS-KRVDDAYRL 253
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+ M GV P+ + L + + ++ L L + G+ + YS LI G +
Sbjct: 254 FDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFR 313
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVV--KGFLQNGNVKGLANLIIEAQKLEP 361
E L M + + + Y + KG + G V+ L+ E +
Sbjct: 314 AKRYEDVQ------LLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNE---MTE 364
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
SG+V D +I ++GL +A S+ E++ C + Y + C+ T +
Sbjct: 365 SGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRD 424
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A ++ ++ G +++LI+ + + A LF M R L +L +
Sbjct: 425 AQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSL---FLRLSQ 481
Query: 482 GLMENHRPELMAAFLDEVVEDP----------RVEVKTHD---------WNSIIHAFCKA 522
G +H L +A L ++VE R+ ++ D +N +++ FCK
Sbjct: 482 G--PSH--VLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKL 537
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
G A + R M F P+ TY +LING
Sbjct: 538 GNFNGAYKLFREMQFKGLSPDTVTYGTLING 568
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 17/284 (5%)
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
C+++ L N N L +EA L+ GI V F +I + +GL+DKA
Sbjct: 94 CDLITDLLINQNGLELYCQTLEA--LKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGS 151
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M C+ + Y L +++ A + + +V + LI+ S +
Sbjct: 152 MRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGN 211
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A LF +M + I +Y +++GL + R + D+ ++D V N
Sbjct: 212 VKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDK-MKDSGVGPDFVTCN 270
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++++ FC R+++A LR + + + Y LI G A++Y V +++ RK
Sbjct: 271 ALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLY----RK 326
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDA--VMQVVEKSQEM 615
+ D K D +LY ++ G +A V +E EM
Sbjct: 327 MIEDNVKP--------DVYLYTIMMKGLAEAGKVRDALELLNEM 362
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 165/428 (38%), Gaps = 35/428 (8%)
Query: 81 TNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLL 140
+ N +A F +T + P +I+ L + + R F ++ +
Sbjct: 209 SGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDK----MKDSGVGP 264
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
DF T + LL + AF+L++ K+ Y + + + + R K
Sbjct: 265 DFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRA--------KR 316
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
+E+ + D +KP++Y ++G V DA +++ M+ GV P+ +
Sbjct: 317 YEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEA-GKVRDALELLNEMTESGVVPDTVCYN 375
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L + GL + L+ ++ + YS LISG + G A
Sbjct: 376 VLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIF------ 429
Query: 321 GNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLIIEAQKL--EPS---------GIVVD 367
ME+ S T+ ++ G + G ++ A+L+ ++ PS V+D
Sbjct: 430 NEMEKLGCYPSAVTFNSLIDGLCKTGQLEK-AHLLFYKMEIGRNPSLFLRLSQGPSHVLD 488
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+ ++ + GL KA+ IL ++ G + G+ Y + +CK A +L
Sbjct: 489 SASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFR 548
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
++ GL D Y LI + Q + A+ +F M + Y T+MT +
Sbjct: 549 EMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMC--R 606
Query: 488 RPELMAAF 495
R EL AF
Sbjct: 607 RMELPRAF 614
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 133/358 (37%), Gaps = 56/358 (15%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ N ++G C + +S+A + +S PN ++ L GL E
Sbjct: 369 PDTVCYNVLIKGFC-DMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQE 427
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-----------SRTILLCLGGGN---- 322
+ + M + G V ++SLI G K G LE A + ++ L L G
Sbjct: 428 IFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVL 487
Query: 323 -------------------------MEQSDFSKE----TYCEVVKGFLQNGNVKGLANLI 353
M+ +D TY +V GF + GN G L
Sbjct: 488 DSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLF 547
Query: 354 IEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
E Q G+ D +V +G +I+ + + A+ + D+M GC+ VY +
Sbjct: 548 REMQF---KGLSPD-TVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTW 603
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR-EARIYD 471
C+ A L + + + A IE Q+ + A +M + +D
Sbjct: 604 MCRRMELPRAFSLWLKYLRNIRSQEDEAIKA-IEGYFEKQEVEKAVRGLLEMDFKLNDFD 662
Query: 472 LKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
L G Y + GL + R E + FL ++E+ +V + +I+ K G L+ A
Sbjct: 663 L-GPYAIWLIGLCQTRRVGEALKIFL--ILEEYKVVITPPCCVKLIYFLLKEGDLDRA 717
>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
Length = 800
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 144/351 (41%), Gaps = 28/351 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M +I + G C+ + + DA +V E M G+ P+ +F L ++ +GL +
Sbjct: 440 MDMDIMHYTTLINGYCH-VGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEA 498
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++L M + ++ +I G G + A C NME D S + Y
Sbjct: 499 LKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAE--AFFC----NME--DKSIDNYGA 550
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ + + + + L E L G+++DR + ++ G D+A +L M
Sbjct: 551 MITGYCEAKHTEKASELFFE---LSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTML 607
Query: 396 ACGCSVGLGVYVPTLKAYCK--EHRTAEATQLVMDI-SSSGLQLDVGNYDALIEASITSQ 452
+Y + A + + R AEA V DI SGL D+ Y +I
Sbjct: 608 DLNMEPSKDMYGKVITACYRAGDMRNAEA---VFDILRKSGLTPDIFTYTTMINVCCRQN 664
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV----------VED 502
A +LF+DM+ I ++ ++ G ++ E A EV +++
Sbjct: 665 RLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKRVHSEAFARKRKEVNLAASNIWKEMQN 724
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ + ++I CK RLEDA M++ EP+ T +L++G
Sbjct: 725 TEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVEPDRATCTALLSG 775
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 148/355 (41%), Gaps = 21/355 (5%)
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
Y G+ ++ + + GF + ++ L++ + G +++A I L +
Sbjct: 174 YVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAA-LAIYKQLKSLGLNP 232
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
+D+ TY ++K F + G++ +N+ Q++E G++ + I SD
Sbjct: 233 NDY---TYSIIIKAFCRKGSLVEASNVF---QEMELCGVIPNAYAYTTYIEGLCANQRSD 286
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+ +L + + YV ++ +C E + A ++ D+ L D Y LI
Sbjct: 287 FGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSELI 346
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV--VEDP 503
+ D A +L DM I K + + + T L + + ++E +D
Sbjct: 347 RGYCKAGDLSKALALHNDMESKGI---KTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDL 403
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
R+ + +N ++ A CK +++ A L M Q + + Y +LINGY +
Sbjct: 404 RIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDA 463
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE--KSQEMK 616
++ E++ KG++ + + L A + G + +++ E KSQ++K
Sbjct: 464 FRVFEEME-------GKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLK 511
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 162/399 (40%), Gaps = 63/399 (15%)
Query: 169 FKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALE 228
K R F+P +L++ N A L ++++ + L+ PN Y + ++
Sbjct: 190 IKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLN-------PNDYTYSIIIK 242
Query: 229 GCCYGLQSVSDAEKVIETMSVLGVRPN---------------ESSFGF------------ 261
C S+ +A V + M + GV PN S FG+
Sbjct: 243 AFCRK-GSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAWKEGNIP 301
Query: 262 ---LAYLYALKGL--QEKIVELESLMNEFG---FSSQMVFYSSLISGYVKLGNLESASRT 313
AY+ ++G + K+ E ++ + S YS LI GY K G+L A
Sbjct: 302 IDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSELIRGYCKAGDLSKA--- 358
Query: 314 ILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA-QKLEPSGIVVDRSVGF 372
L L +ME +T C +V LQ KG+ + ++E ++ + I +D
Sbjct: 359 --LALHN-DMESKGI--KTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYN 413
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
++ A L D+A ++LDEM + + Y + YC + +A ++ ++
Sbjct: 414 IVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGK 473
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT---IMTGLMENHRP 489
GL+ DV ++ L+ A A L+ M+ DLK + +T ++ GL +
Sbjct: 474 GLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQ---DLKPNAITHNVMIEGLCIGGKV 530
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
AF +ED ++ ++ ++I +C+A E A
Sbjct: 531 TEAEAFFCN-MEDKSID----NYGAMITGYCEAKHTEKA 564
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 86/196 (43%), Gaps = 8/196 (4%)
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ S GL + Y +I+A A ++F++M + +Y T + GL N R
Sbjct: 225 LKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQR 284
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
+ L + ++ + + + + ++I FC +++ A+ L M + + + Y
Sbjct: 285 SDFGYQVL-QAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYS 343
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQV 608
LI GY A L + ++++ KGIK +V L + G V++
Sbjct: 344 ELIRGYCKAGDLSKALALHNDME-------SKGIKTNCVIVSTILQYFCEKGMHSQVVEE 396
Query: 609 VEKSQEMKVFVDKWKY 624
++ +++++F+D+ Y
Sbjct: 397 FKRFKDLRIFLDEVSY 412
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 11/279 (3%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M + G V ++L++G + G +++A+ L GG + D + ++ G+
Sbjct: 126 MCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA---LADRGGGIHALDVIG--WNTLIAGYC 180
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCS 400
+ G+ ++ A ++ G+ +D VG+ +++ G D A +LD M G
Sbjct: 181 RVGDTPAALSV---ADRMTAQGLPMD-VVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVD 236
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
+ Y P + YC+ EA L + +G+ LDV AL+ F A++L
Sbjct: 237 PNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL 296
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFC 520
FR+M + +Y T++ L + R + + + L E+V V + + +++
Sbjct: 297 FREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG-VVMDLVTYTALMDWLG 355
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
K G+ ++ K TLR + PN TY LI+ A
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 155/387 (40%), Gaps = 45/387 (11%)
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
++ R AL +NL PN ++ C +V +AE+V+ M + PN +F
Sbjct: 364 KDTLRFALSDNL---SPNGVTYTVLIDALCKA-HNVDEAEQVLLEMEEKSISPNVVTFSS 419
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLG 319
+ + +GL +K E + +M E G + +V Y +LI G+ K ++A +LC
Sbjct: 420 VINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLC-- 477
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA----------------------- 356
E +K +V G QNG ++ L +A
Sbjct: 478 ----EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533
Query: 357 ---------QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
Q+L ++ D V I+ LG +A S L EM G Y
Sbjct: 534 DMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYN 593
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ ++C++ TA+A +L+ ++ S ++ ++ Y+ L+ + + A L +M A
Sbjct: 594 TMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
++ ++ ++ R +++ + E + + + +N+++ C G
Sbjct: 654 GFSPSSLTHRRVLQACSQSRRLDVILD-IHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGY 554
A L M+ P+ T+ +LI G+
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGH 739
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/406 (19%), Positives = 163/406 (40%), Gaps = 27/406 (6%)
Query: 224 NAALEGCCYGLQ-----SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N L G C Q +++D I + V+G + L Y G + +
Sbjct: 139 NTLLAGLCRNGQVDAAAALADRGGGIHALDVIG-------WNTLIAGYCRVGDTPAALSV 191
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M G +V Y++L++G+ + G +++A + + G D + TY +
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG----VDPNVATYTPFIV 247
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
+ + KG+ + + +G+++D +++ G +A+++ EM+ G
Sbjct: 248 YYCRT---KGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG 304
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ Y + + K R E L+ ++ S G+ +D+ Y AL++
Sbjct: 305 AAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVK 364
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
R + +Y ++ L + H + L E+ E+ + ++S+I+
Sbjct: 365 DTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM-EEKSISPNVVTFSSVING 423
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
F K G L+ A R M PN TY +LI+G+ + + L ++H++
Sbjct: 424 FVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML------- 476
Query: 579 QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+G+K +VD+ + L + G + M + + + + +D Y
Sbjct: 477 CEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 147/356 (41%), Gaps = 15/356 (4%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ +A + G C S+A + M +G PN ++ L A G ++++ L
Sbjct: 273 DVVTLSALVAGLCRD-GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M G +V Y++L+ K G + T+ L N+ + TY ++
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSD-NLSPNGV---TYTVLID 387
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
+ NV +++E ++ S VV S +I+ V GL DKA M G
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFS---SVINGFVKRGLLDKATEYKRMMKERG 444
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ + Y + + K A ++ D+ G++++ D+L+ + + A
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSI 515
+LF+D + + +Y T++ GL + F E+++ P V +N
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV----YNVF 560
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
I+ C G+ ++AK L M + +P+ TY ++I + + L + HE+K
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 137/365 (37%), Gaps = 47/365 (12%)
Query: 209 LDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL 268
+D N M P+ N + C L +A+ + M +G++P++S++ + +
Sbjct: 546 MDRN---MLPDAVVYNVFINCLCM-LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCR 601
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
KG K ++L M ++ Y++L++G G +E A
Sbjct: 602 KGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA------------------ 643
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
K L N ++ A PS + R ++ AC D
Sbjct: 644 ------------------KYLLNEMVSA-GFSPSSLTHRR-----VLQACSQSRRLDVIL 679
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
I + M G + VY L+ C T +AT ++ ++ SG+ D ++ALI
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
S +AF+ + M I ++ T++ GL R L E +E +E
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE-MEKSGLEPN 798
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
++ + K +A R M+ F P TY +LI+ + A ++
Sbjct: 799 NLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFK 858
Query: 569 EIKRK 573
+++++
Sbjct: 859 DMQKR 863
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 111/504 (22%), Positives = 197/504 (39%), Gaps = 116/504 (23%)
Query: 163 ALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE-----------CCRIALDE 211
L+ MF+N P L G L++ K+ N + +++F+E C I +D
Sbjct: 170 GLLTWMFENG-LNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDG 228
Query: 212 NL---DFMK---------------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG-V 252
L DF+K P++ N + G C K+ E+M + +
Sbjct: 229 FLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLC-------KLGKLDESMEMWNRM 281
Query: 253 RPNESSFGFLAYLYALKGLQ--------EKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
+ NE S + + GL EK+ + M E G S + Y++++SG +
Sbjct: 282 KKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQE---MIESGLSPDVRTYNAMLSGLFRT 338
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKETYCEVV------KGFLQNGNVKGLANLIIEAQK 358
G L C N+ SK C +V +G L N K + I Q
Sbjct: 339 GKLNK-------CFELWNV----MSKNNCCNIVSYNMLIQGLLDN---KKVEQAICYWQL 384
Query: 359 LEPSGIVVDRSV-GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
L G+ D + G I C N G +KA IL+E G + Y + CK+
Sbjct: 385 LHERGLKADSTTYGLLINGLCKN-GYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKG 443
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+A +L+ + + +L+ +++LI + + + A S+ R+M+ K
Sbjct: 444 MLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKS------KDCAP 497
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
T+++ +N+II+ CKA R DA +L+ M+
Sbjct: 498 TVVS------------------------------YNTIINGLCKAERFSDAYLSLKEMLE 527
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTDGQKGIKFEHNLVDAFLYAL 596
+P+ TY LI+G E+ L +WH+ I +++ D Q HN++ ++ L
Sbjct: 528 EGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQM-----HNII---IHGL 579
Query: 597 VKGGFFDAVMQVVEKSQEMKVFVD 620
D +++ + +++ D
Sbjct: 580 CTAQKVDVALEIFTQMRQVNCVPD 603
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 154/359 (42%), Gaps = 11/359 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M PN+ N ++ C Q + ++ M G+ P+ S+G L A G
Sbjct: 145 MSPNLQTYNILIKISCKKRQ-FEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDA 203
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF-SKETYC 334
VEL M+ G + ++ Y+ LI G+++ G+ A+ L E S + S ETY
Sbjct: 204 VELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLL----TESSVYPSVETYN 259
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G + G + + +K E S + S +I G + A + EM
Sbjct: 260 IMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFS---SMIHGLSKAGNFNAAEKVFQEM 316
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G S + Y L + + + +L ++ S ++ +Y+ LI+ + ++
Sbjct: 317 IESGLSPDVRTYNAMLSGLFRTGKLNKCFEL-WNVMSKNNCCNIVSYNMLIQGLLDNKKV 375
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
+ A ++ + E + +Y ++ GL +N L+E E+ ++ T ++S
Sbjct: 376 EQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEA-ENEGADLDTFAYSS 434
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++H CK G LE A + +M + + N + SLINGYV A + + + E+K K
Sbjct: 435 MVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSK 493
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 145/406 (35%), Gaps = 62/406 (15%)
Query: 190 KNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV 249
K NF A KVF+E L P++ NA L G L K E +V
Sbjct: 302 KAGNFNAAEKVFQEMIESGL-------SPDVRTYNAMLSG----LFRTGKLNKCFELWNV 350
Query: 250 LGVRPNESSFGFLAYLYALKGL-----QEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
+ + ++Y ++GL E+ + L++E G + Y LI+G K
Sbjct: 351 MS---KNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKN 407
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
G L A R L E +D Y +V G + G ++ LI + +K
Sbjct: 408 GYLNKALRI----LEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRK-- 461
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
++ V +I+ V ++A S+L EM + C+ + Y + CK R ++A
Sbjct: 462 -LNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYL 520
Query: 425 LVMDISSSGLQLDVGNYDALIEASI----------------------------------- 449
+ ++ GL+ D+ Y LI+
Sbjct: 521 SLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLC 580
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
T+Q A +F MR+ ++ TIM GL + D ++E ++
Sbjct: 581 TAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILE-AGLQPDI 639
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+N C R+ DA L + PN T+ L+ V
Sbjct: 640 ISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVV 685
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/411 (19%), Positives = 158/411 (38%), Gaps = 55/411 (13%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ +AC A L + + A +V + M+ G+ + + + ++ G +
Sbjct: 145 LAPDAHACTALLTALARARMTAT-ARRVFDEMARAGLAVSTHVYNAMLHVCLKAGDAARA 203
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--Y 333
L + M+ G Y+++I+ Y K G R +C+ M++ +T +
Sbjct: 204 EALVTRMDAAGVPLDRFSYNTVIALYCKKG-----MRYEAMCVRD-RMDKEGIRADTVTW 257
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G + G VK A L E + + D +I G ++A + E
Sbjct: 258 NSLIHGLCKYGRVKEAAQLFTE---MAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGE 314
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M A G G+ Y L+ C++ + E QL+ ++ +Q D + LI A
Sbjct: 315 MEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGH 374
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
SA + + M E +GL N +
Sbjct: 375 MTSACKVKKKMME--------------SGLQLNQ----------------------FTYK 398
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++IH FCKA L++AK +M+ F PN + L++G+ +VL++ E+ +
Sbjct: 399 ALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMK- 457
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+G+ + + + + L + G D +V ++ Q + D Y
Sbjct: 458 ------RGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVY 502
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 151/361 (41%), Gaps = 22/361 (6%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
+VF+E R L + ++Y NA L C + AE ++ M GV + S
Sbjct: 170 RVFDEMARAGL-----AVSTHVY--NAMLH-VCLKAGDAARAEALVTRMDAAGVPLDRFS 221
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ + LY KG++ + + + M++ G + V ++SLI G K G ++ A++
Sbjct: 222 YNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMA 281
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
Q+ TY ++ G+ + GN++ L E +E +G++ + I+
Sbjct: 282 AA----QATPDNVTYTTLIDGYCRAGNIEEAVKLRGE---MEATGMLPGVATYNAILRKL 334
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
G + + +L+EM+ + AYCK A ++ + SGLQL+
Sbjct: 335 CEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQ 394
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
Y ALI +++ A F M +A + ++ G + + + + DE
Sbjct: 395 FTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDE 454
Query: 499 VVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+++ P V + S+I C+ G ++ A++ +M + Y +L Y+
Sbjct: 455 LMKRGLPPDKAV----YRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYL 510
Query: 556 T 556
T
Sbjct: 511 T 511
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 119/277 (42%), Gaps = 34/277 (12%)
Query: 381 LGLSDKAHSIL---DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
L S + H L D+M A G + L A + TA A ++ +++ +GL +
Sbjct: 124 LAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVS 183
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT-GLMENHRPELMAAFL 496
Y+A++ + + D A +L M A + + SY T++ + R E M +
Sbjct: 184 THVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMC--V 241
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
+ ++ + T WNS+IH CK GR+++A + M Q P++ TY +LI+GY
Sbjct: 242 RDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCR 301
Query: 557 AEQYFSVLMM---------------WHEIKRKISTDG-------------QKGIKFEHNL 588
A + + ++ I RK+ DG ++ ++ +H
Sbjct: 302 AGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVT 361
Query: 589 VDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYK 625
+ + A K G + +V +K E + ++++ YK
Sbjct: 362 CNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYK 398
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 93/246 (37%), Gaps = 12/246 (4%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
EE ++ + M P + NA L C + + +++ M V+ + +
Sbjct: 305 IEEAVKLRGEMEATGMLPGVATYNAILRKLCED-GKMKEVNQLLNEMDERKVQADHVTCN 363
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L Y +G +++ M E G Y +LI G+ K L+ A
Sbjct: 364 TLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFF----- 418
Query: 321 GNMEQSDFSK--ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
M + FS + +V GF + N + ++ +L G+ D++V +I
Sbjct: 419 -QMVDAGFSPNYSVFSWLVDGFCKKNNADAV---LLIPDELMKRGLPPDKAVYRSLIRRL 474
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
GL D+A + D+M + G VY Y E + A+ + ++ + L +
Sbjct: 475 CRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYITP 534
Query: 439 GNYDAL 444
Y+ L
Sbjct: 535 QIYNCL 540
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 136/320 (42%), Gaps = 14/320 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+++A K++E M G+ P+ ++ + +G+ E+ EL + + G ++ Y+
Sbjct: 233 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNI 292
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK---GLANLI 353
L+ ++ G + + + G + +K TY ++ + G + + ++
Sbjct: 293 LLRAFLNQGKWDEGEKLVAEMFSRG----CEPNKVTYSILISSLCRFGRIDEAISVLKVM 348
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
IE ++L P D +ISA G D A I+D M + GC + Y L A
Sbjct: 349 IE-KELTPDTYSYDP-----LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 402
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK +A ++ + G +V +Y+ +I A + D A + M I +
Sbjct: 403 CKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDE 462
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y ++++ L + E LD+ +E +N ++ CK R++DA
Sbjct: 463 ITYNSLISCLCRDGLVEEAIGLLDD-MEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFA 521
Query: 534 RMIFLQFEPNDQTYLSLING 553
MI PN+ TY+ LI G
Sbjct: 522 EMIEKGCRPNETTYILLIEG 541
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 18/248 (7%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLAN 351
Y+++ISG+ K+ +E+A++ + M+ F + TY ++ G L N GLA
Sbjct: 150 YNAVISGFCKVNQIEAATQVL------NRMKARGFLPDIVTY-NIMIGSLCNRRKLGLAL 202
Query: 352 LIIEAQKLE---PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
+++ L+ P+ V+ ++ +I A + G ++A +L+EM A G + Y
Sbjct: 203 TVLDQLLLDNCMPT--VITYTI---LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 257
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
++ CKE A +L+ ++S G + DV +Y+ L+ A + + L +M
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
K +Y +++ L R + + L ++E + T+ ++ +I A CK GRL+ A
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEK-ELTPDTYSYDPLISALCKEGRLDLA 376
Query: 529 KRTLRRMI 536
+ MI
Sbjct: 377 IGIMDYMI 384
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 130/310 (41%), Gaps = 21/310 (6%)
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
G+ E + LE ++ G M Y+++I G K G +E A+ ++ L E S
Sbjct: 232 GINEAMKLLEEMLAR-GLLPDMYTYNAIIRGMCKEGMVERAAE-LITSLTSKGCEPDVIS 289
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
Y +++ FL G L+ E ++ EP+ + +IS+ G D+A
Sbjct: 290 ---YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI-----LISSLCRFGRIDEA 341
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
S+L M + Y P + A CKE R A ++ + S+G D+ NY+ ++ A
Sbjct: 342 ISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAA 401
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM----ENHRPELMAAFLDEVVEDP 503
+ + A +F +R SY T+++ L + ++ A + + ++
Sbjct: 402 LCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPD 461
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+ +NS+I C+ G +E+A L M F P +Y ++ G +
Sbjct: 462 EIT-----YNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDA 516
Query: 564 LMMWHEIKRK 573
+ M+ E+ K
Sbjct: 517 IGMFAEMIEK 526
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 9/246 (3%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+ EK++ M G PN+ ++ L G ++ + + +M E + Y LI
Sbjct: 305 EGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLI 364
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA-Q 357
S K G L+ A + + G + Y ++ +NGN AN +E
Sbjct: 365 SALCKEGRLDLAIGIMDYMISNGCLPDI----VNYNTILAALCKNGN----ANQALEIFN 416
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
KL G + S +ISA + G +A ++ M + G Y + C++
Sbjct: 417 KLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDG 476
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
EA L+ D+ SG + V +Y+ ++ + A +F +M E + +Y+
Sbjct: 477 LVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYI 536
Query: 478 TIMTGL 483
++ G+
Sbjct: 537 LLIEGI 542
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 102/494 (20%), Positives = 193/494 (39%), Gaps = 56/494 (11%)
Query: 124 RAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGF 183
+A A V ++E+ + D T T++ M A +++ M +++ ++
Sbjct: 28 QALALVDRMVEEGHQP-DAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAI 86
Query: 184 LVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEG-CCYGLQSVSDAEK 242
+ +C K+ N + +F E + E F PN+ N ++G C YG SDAE+
Sbjct: 87 VDRLC-KDGNHIKAQNIFTE-----MHEKGIF--PNVLTYNCMIDGYCSYG--KWSDAEQ 136
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
++ M + P+ +F L + +G EL M + YSS+I G+
Sbjct: 137 LLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFC 196
Query: 303 KLGNLESASRTILLCLGGG---NMEQSDFSKETYC----EVVKGFLQNGNVKGLANLIIE 355
K LE A L + G ++ + + C ++ GF Q GNV +L
Sbjct: 197 KHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLF-- 254
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
Q++ +G+ D +++ G +KA + + + CK
Sbjct: 255 -QEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCK 313
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
++ EA L + +G++ DV Y+ LI + +F A ++ +M I +
Sbjct: 314 GNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVT 373
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDP-------------------RVE---------- 506
Y +++ G + +R E +D +V + RV+
Sbjct: 374 YNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMC 433
Query: 507 -----VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
T +N++IH FCK G L A+ M+ P+ T+ S++ G T +
Sbjct: 434 QRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQ 493
Query: 562 SVLMMWHEIKRKIS 575
L M ++++ +
Sbjct: 494 KGLTMLEDLQKSVD 507
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 25/286 (8%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M E G + +V +++L++G + G + A + + G+ Q D TY +V G
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGH--QPD--AVTYGTIVNGMC 56
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
+ G+ N++ +K++ S I + + I+ G KA +I EM+ G
Sbjct: 57 KLGDTVSALNML---RKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFP 113
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ Y + YC + ++A QL+ D+ + DV + ALI A + A L+
Sbjct: 114 NVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELY 173
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE--------------DPRVEV 507
R+M I+ +Y +++ G ++ R E D +V D
Sbjct: 174 REMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRA 233
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
K H +IH FC+ G + A+ + MI P+ T +L+ G
Sbjct: 234 KRH----LIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAG 275
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 98/263 (37%), Gaps = 18/263 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QE 273
+ P+I CN L G C EK +E V + ++ + G+
Sbjct: 262 VSPDIVTCNTLLAGLCEN----GKLEKALEMFKVF--QKSKMDLDTATCNIIINGMCKGN 315
Query: 274 KIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
K+ E L N G + +V Y+ LI +VK GN A L L G + S
Sbjct: 316 KVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIP----ST 371
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY +V GF + ++ ++ + G D +I G D +
Sbjct: 372 VTYNSMVDGFCKQNRLEEARQMV---DSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLEL 428
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
EM G Y + +CK A + ++ SSG+ D + +++ T
Sbjct: 429 FSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCT 488
Query: 451 SQDFQSAFSLFRDMREARIYDLK 473
+ Q ++ D++++ ++L+
Sbjct: 489 KAELQKGLTMLEDLQKSVDHELE 511
>gi|356562139|ref|XP_003549331.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 689
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 132/319 (41%), Gaps = 21/319 (6%)
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
EK+ + M GVRP+ SF + + L K VE M F V YS++I
Sbjct: 186 EKLFDEMLQRGVRPDNVSFSTIISCARICSLPNKAVEWFEKMPSFRCEPDDVTYSAMIDA 245
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
Y + GN++ A R E+ T+ ++K + GN G N+ E + L
Sbjct: 246 YGRAGNIDMALRLY----DRARTEKWRLDSVTFSTLIKMYGLAGNYDGCLNVYQEMKAL- 300
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
G+ + + ++ A +A SI EM G Y L+AY + +
Sbjct: 301 --GVKSNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFLPNWATYASLLRAYGRGRYSE 358
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK----GSY 476
+A + ++ G++++ Y+ L+ AF +F DM+ + S
Sbjct: 359 DALFVYKEMKEKGMEMNTHLYNTLLAMCADLGLADDAFKIFEDMKSSATCLCDSWTFSSL 418
Query: 477 LTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+TI + E M L+E++E P + V T S++ + K GR +D +T
Sbjct: 419 ITIYSCSGNVSEAERM---LNEMIESGFQPTIFVLT----SLVQCYGKVGRTDDVLKTFN 471
Query: 534 RMIFLQFEPNDQTYLSLIN 552
+++ L P+D+ L+N
Sbjct: 472 QLLDLGISPDDRFCGCLLN 490
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 159/370 (42%), Gaps = 17/370 (4%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
++ETM G+ ++ +F + YA ++ VE M+ FG +++ Y+ LI
Sbjct: 183 LVETMRCRGLL-SKDTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLS 241
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
K ++ A + I + D +TY +++G+ G+ K L + Q++ +
Sbjct: 242 KSKQVKKA-QAIYKEMKRKGKFVPDL--KTYTVLMEGW---GHEKDLLMVKTMYQEMIDA 295
Query: 363 GIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
GI D V +G +ISA G D+A + EM A GC VY + E R E
Sbjct: 296 GIRPD-VVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDE 354
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A + SG ++V +A++ A + FQ AF + +MR+ ++ +Y I+
Sbjct: 355 ALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVILH 414
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
L+++ + E + D E + + + ++ FC GR++ A + ++M
Sbjct: 415 YLIKSQKFEEAYNIFQRMGID-GCEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGEKGVL 473
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
P + +LING + + + E+ KGI+ L ALV+GG
Sbjct: 474 PCMHMFSALINGLCFENRLEEACVYFQEML-------DKGIRPPGQLFSNLKEALVQGGR 526
Query: 602 FDAVMQVVEK 611
+V K
Sbjct: 527 ISLAQEVALK 536
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 22/304 (7%)
Query: 232 YGLQSVSD---AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFS 288
+GL D A KV E M GVRP+ + + G E+ EL M +
Sbjct: 297 HGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR 356
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKG 348
+ + Y+ + G + G ++ A + L G +E TY VV G NG V
Sbjct: 357 N-VRSYNIFLKGLFENGKVDDA-----MMLWDGLLEAD---SATYGVVVHGLCWNGYVNR 407
Query: 349 LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
++ EA+ E G+ VD +I+A G D+A +++ MN GC V
Sbjct: 408 ALQVLEEAEHRE-GGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNV 466
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ + K + A ++ ++S G L V +Y+ LI + ++ F+ A+ +M E
Sbjct: 467 LIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKG 526
Query: 469 IYDLKGSYLTIMTGLMENHRPE----LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
+Y T++ GL E++ + L FLD P + + +N +IH C +G+
Sbjct: 527 WKPDIITYSTLIGGLYESNMMDAALRLWHQFLD-TGHKPDIIM----YNIVIHRLCSSGK 581
Query: 525 LEDA 528
+EDA
Sbjct: 582 VEDA 585
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/411 (20%), Positives = 158/411 (38%), Gaps = 54/411 (13%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AE + V PN ++ L + KG EK L + M G S + Y +LI
Sbjct: 132 AENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIG 191
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE--VVKGFLQNGNVKGLANL---II 354
G K G+L A M + + C ++ GF + G+ + ++
Sbjct: 192 GVAKSGDLGFALEVF------DEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLL 245
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
+ + PS VV +V +IS G + I + M L Y +
Sbjct: 246 REELVFPS--VVSYNV---MISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLS 300
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+ A ++ ++ G++ DV +A++ + + + F L+ +M + + +++
Sbjct: 301 EAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVR- 359
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVE--------------------------------D 502
SY + GL EN + + D ++E +
Sbjct: 360 SYNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHRE 419
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
++V ++S+I+A CK GRL++A + M + N LI+G+V + S
Sbjct: 420 GGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDS 479
Query: 563 VLMMWHEIKRKISTDGQKGIKFEHN-LVDAFLYALVKGGFFDAVMQVVEKS 612
+ ++ R++S G +N L++ L A +D V +++EK
Sbjct: 480 AV----KVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKG 526
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 145/349 (41%), Gaps = 31/349 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I + N + G C + + +A ++ M G PN + L G ++ +E
Sbjct: 31 PDIVSYNTLINGLCKA-KKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAME 89
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M + GF + +V Y +LISG+ GNL+ LG G + TY +V
Sbjct: 90 LLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG----ISANVVTYSCLV 145
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G + G K AN ++ A + GI D G+I G + A +L+ M
Sbjct: 146 HGLCRLGQWKE-ANTVLNA--MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEK 202
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G Y L CKE +A +++ + G + DV Y+ L++ A
Sbjct: 203 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEA 262
Query: 458 FSLFRDM------REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
LF M E ++ ++ ++ GL + R L + V+ R VK
Sbjct: 263 LKLFNSMFDNENCLEPNVF----TFNMLIGGLCKEGR-------LTKAVKIHRKMVKKGS 311
Query: 512 ------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N ++ KAG++++A ++++ L F PN TY LI+G+
Sbjct: 312 CGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 120/548 (21%), Positives = 216/548 (39%), Gaps = 65/548 (11%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTV 145
EA + + S+ P N+LI L + LK A ++ +E + T
Sbjct: 16 EAMGLIREMGRKSVSPDIVSYNTLINGLCKAK---KLKEAVG-LLLEMEAAGCFPNSVTC 71
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECC 205
TL+ + A L++ M K + L+G + C N N ++F+E
Sbjct: 72 TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCN-NGNLDRGKELFDEML 130
Query: 206 RIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYL 265
+ N+ Y+C + G C L +A V+ M+ G+ P+ ++ L
Sbjct: 131 GKGISANV-----VTYSC--LVHGLCR-LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182
Query: 266 YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
G ++L +LM E G V Y+ L+SG K G + A + + + + G ++
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG--KK 240
Query: 326 SDFSKETYCEVVKGFLQNGNV----KGLANLIIEAQKLEPSGIVVDRSVGFGII------ 375
+D TY ++KG G V K ++ LEP+ + +G G+
Sbjct: 241 ADVV--TYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIG-GLCKEGRLT 297
Query: 376 ------------SACVNL-------GLSDKAHSILDEMNACGCSVGLGVYVPT------- 409
+C NL G KA I + M + LG +VP
Sbjct: 298 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG-FVPNSFTYSIL 356
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ +CK A L ++ + GL + +Y+ L+ + + A SLF++M A
Sbjct: 357 IDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANC 416
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDWNSIIHAFCKAGRLEDA 528
S+ T++ G ++ + + ++VE R + T ++++I+ K G L++A
Sbjct: 417 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALT--FSTLINRLSKLGELDEA 474
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
K L RM+ F P+ Y SL+ G + ++ + H++ KG + +
Sbjct: 475 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM-------AAKGTVLDRKI 527
Query: 589 VDAFLYAL 596
V L L
Sbjct: 528 VSTILTCL 535
>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
Length = 642
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 120/510 (23%), Positives = 205/510 (40%), Gaps = 87/510 (17%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNH-NLKRAFASVVYVIEKNPKLLDFQTV 145
A++S ++L A++ P PV N LI L++L+++ +L A + + P D T
Sbjct: 95 AFRSLRAL-ASAPPPPTPVYNRLI--LTALRESRLDLVEALYKDLLLAGAQP---DVFTR 148
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECC 205
+ LL ++ +A A + + M F L G+ CR + A LKV
Sbjct: 149 NLLLRALCDAGRMELAQRVFEAMPVRNEFSFGILARGY----CRAGRSVDA-LKV----- 198
Query: 206 RIALDENLDFMKP-NIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
LD M N+ CN + G C GL V +AE+++E M V G+ PN +F
Sbjct: 199 -------LDGMPSMNLVVCNTVVAGFCKEGL--VEEAERLVERMRVQGLAPNVVTFNSRI 249
Query: 264 YLYALKGLQEKIVELESLMNE---FGFS-SQMVFYSSLISGYVKLGNLESASRTILLCLG 319
G + M E G V + ++SG+ G ++ A + +
Sbjct: 250 SALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRC 309
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA--QKLEP---------------- 361
GG + + E+Y + G ++NG V L+ E +++ P
Sbjct: 310 GGFLRRV----ESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEG 365
Query: 362 -------------SGIVVDRSVGF-GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
SG++ V + ++ A + G A+ ILDEM GC+ Y
Sbjct: 366 KAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYN 425
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE- 466
L++ + RT EA +L+ +S G LD + +I+ + A + M E
Sbjct: 426 VLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEE 485
Query: 467 --ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
+ L S+L++++ + R D + ++ +I A CK GR
Sbjct: 486 GSTALGRLGNSFLSVVSDSSISQR-----CLPDRIT-----------YSILISALCKEGR 529
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++AK+ L MI P+ Y + I+GY
Sbjct: 530 FDEAKKKLLEMIVKDISPDSVIYDTFIHGY 559
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 124/317 (39%), Gaps = 41/317 (12%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V +A +++ M+ + PN ++ + +G +E+ + S +V Y+S
Sbjct: 332 VGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTS 391
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
L+ Y GN+ +A+R + M Q + TY +++ + G L+
Sbjct: 392 LLHAYCSKGNIAAANRIL------DEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLL- 444
Query: 355 EAQKLEPSGIVVDRSVGFGII--SACVNLGLSDKAHSILDEMNACGCSVGLG-------- 404
+++ G +D + G II C N L D A I+D M G S LG
Sbjct: 445 --ERMSEKGYSLD-TAGCNIIIDGLCRNSKL-DVAMGIVDGMWEEG-STALGRLGNSFLS 499
Query: 405 ----------------VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
Y + A CKE R EA + ++++ + D YD I
Sbjct: 500 VVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGY 559
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
A + RDM + +Y ++ G E H+ + + + E +E+ V
Sbjct: 560 CKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSE-MEEKGVSPN 618
Query: 509 THDWNSIIHAFCKAGRL 525
+NS+I +FC+ G L
Sbjct: 619 VLTYNSLIKSFCQQGML 635
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 127/323 (39%), Gaps = 59/323 (18%)
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
CRI+ PN+Y N + C + A +V E M +G+ PN++S+ L
Sbjct: 210 CRIS---------PNVYTRNMVMRAFCKS-GKLEKAVQVFEEMESVGISPNDTSYNTLIM 259
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
Y KGL V+L++ M G + +V ++SLI G+ K G L AS+
Sbjct: 260 GYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKV----------- 308
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
FS+ ++ + P+ I + +I+ +G S
Sbjct: 309 ---FSE-----------------------MKVLNVAPNTITYN-----TLINGHSQMGNS 337
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
+ + +EM+ G + Y + CKE +T +A +V ++ L + + AL
Sbjct: 338 EMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSAL 397
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE--- 501
I + AF L++ M + + ++ +++ +N E L E+ E
Sbjct: 398 ISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCF 457
Query: 502 DPRVEVKTHDWNSIIHAFCKAGR 524
P +V + I H C G+
Sbjct: 458 TPGSDV----LSEIYHGLCCCGK 476
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 89/227 (39%), Gaps = 45/227 (19%)
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
+S+ ++L D A + EM C S + ++A+CK + +A Q+ ++ S G+
Sbjct: 188 LSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGI 247
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+ +Y+ LI SA L MR KG
Sbjct: 248 SPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRA------KG-------------------- 281
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
VE +NS+I FCK G+L +A + M L PN TY +LING+
Sbjct: 282 ----------VEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGH 331
Query: 555 VTAEQYFSVLMMWHEIKRKISTD-GQKGIKFEHNLVDAFLYALVKGG 600
M E+ R++ + + G+K + +A + L K G
Sbjct: 332 SQ--------MGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEG 370
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/243 (16%), Positives = 106/243 (43%), Gaps = 4/243 (1%)
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
V++ F ++G ++ + +++E GI + + +I GL + A + + M
Sbjct: 222 VMRAFCKSGKLEKAVQVF---EEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMR 278
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A G + + + +CKE + EA+++ ++ + + Y+ LI + +
Sbjct: 279 AKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSE 338
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
L+ +M + +Y ++ GL + + + AA++ + ++ + ++++
Sbjct: 339 MGRRLYEEMSRNGVKADILTYNALILGLCKEGKTK-KAAYMVKELDKENLVPNASTFSAL 397
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I C + A + + M+ + PN+QT+ L++ + E + ++ E+ +
Sbjct: 398 ISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCF 457
Query: 576 TDG 578
T G
Sbjct: 458 TPG 460
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 119/280 (42%), Gaps = 17/280 (6%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+++ V+ D A + + M + + Y +K YCK +T +A + + D+ + G
Sbjct: 228 LMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 287
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM-ENHRPELM 492
+ D Y +I+A DF S +L+++M E I ++ ++ GL E E
Sbjct: 288 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGY 347
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
F + + + + V + +I + K+G +EDA R L RMI F+P+ TY ++N
Sbjct: 348 TVFENMIRKGSKPNVAI--YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 405
Query: 553 GYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
G + L +H + G+ + + L K G D ++ E+
Sbjct: 406 GLCKNGRVEEALDYFHTCR-------FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
Query: 613 QEMKVFVDKWKYK---QAFMENHKKLKVAKLRKRNFKKME 649
E D + Y AF ++ K + L FK+ME
Sbjct: 459 SEKGCTRDSYCYNALIDAFTKHRKVDEAIAL----FKRME 494
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 163/442 (36%), Gaps = 61/442 (13%)
Query: 88 WKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHT 147
W+ K N + P+ N L+ L S + +R F V+E D T +T
Sbjct: 210 WRKMKE---NGIEPTLYTYNFLMNGLVSAMFVDSAERVFE----VMESGRIKPDIVTYNT 262
Query: 148 LLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRI 207
++ A A ++ M + R ++ ++ C +S+F + + +++E
Sbjct: 263 MIKGYCKAGQTQKAMEKLRDM-ETRGHEADKITYMTMIQACYADSDFGSCVALYQE---- 317
Query: 208 ALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
+DE + P+ ++ + G C +++ V E M G +PN + + L YA
Sbjct: 318 -MDEKGIQVPPHAFS--LVIGGLCKE-GKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 373
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
G E + L M + GF +V YS +++G K G +E A C G S
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
F Y ++ G + G V D+A
Sbjct: 434 F----YSSLIDGLGKAGRV--------------------------------------DEA 451
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI-SSSGLQLDVGNYDALIE 446
+ +EM+ GC+ Y + A+ K + EA L + G V Y L+
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 511
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ A L+ M + I + + TGL + + LDE+ P
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELA--PMGV 569
Query: 507 VKTHDWNSIIHAFCKAGRLEDA 528
+ +I+ CKAGR+++A
Sbjct: 570 ILDAACEDMINTLCKAGRIKEA 591
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 132/324 (40%), Gaps = 22/324 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS-FGFLAYLYALKGLQE- 273
+KP+I N ++G C Q+ +K +E + + R +E+ ++ + A +
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQT----QKAMEKLRDMETRGHEADKITYMTMIQACYADSDF 308
Query: 274 -KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
V L M+E G +S +I G K G L + G S +
Sbjct: 309 GSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG----SKPNVAI 364
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++ G+ ++G+V+ L+ ++ G D +++ G ++A LD
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLL---HRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA---LD 418
Query: 393 EMNAC---GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ C G ++ Y + K R EA +L ++S G D Y+ALI+A
Sbjct: 419 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478
Query: 450 TSQDFQSAFSLFRDMREARIYDLKG-SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ A +LF+ M E D +Y +++G+ + HR E D ++ D +
Sbjct: 479 KHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMI-DKGITPT 537
Query: 509 THDWNSIIHAFCKAGRLEDAKRTL 532
+ ++ C +G++ A + L
Sbjct: 538 AACFRALSTGLCLSGKVARACKIL 561
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 11/278 (3%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M + G V ++L++G + G +++A+ L GG + D + ++ G+
Sbjct: 126 MCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA---LADRGGGIHALDVIG--WNTLIAGYC 180
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCS 400
+ G+ ++ A ++ G+ +D VG+ +++ G D A +LD M G
Sbjct: 181 RVGDTPAALSV---ADRMTAQGLPMD-VVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVD 236
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
+ Y P + YC+ EA L + +G+ LDV AL+ F A++L
Sbjct: 237 PNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL 296
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFC 520
FR+M + +Y T++ L + R + + + L E+V V + + +++
Sbjct: 297 FREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG-VVMDLVTYTALMDWLG 355
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
K G+ ++ K TLR + PN TY LI+ A
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH 393
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 155/387 (40%), Gaps = 45/387 (11%)
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
++ R AL +NL PN ++ C +V +AE+V+ M + PN +F
Sbjct: 364 KDTLRFALSDNL---SPNGVTYTVLIDALCKA-HNVDEAEQVLLEMEEKSISPNVVTFSS 419
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLG 319
+ + +GL +K E + +M E G + +V Y +LI G+ K ++A +LC
Sbjct: 420 VINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLC-- 477
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA----------------------- 356
E +K +V G QNG ++ L +A
Sbjct: 478 ----EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533
Query: 357 ---------QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
Q+L ++ D V I+ LG +A S L EM G Y
Sbjct: 534 DMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYN 593
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ ++C++ TA+A +L+ ++ S ++ ++ Y+ L+ + + A L +M A
Sbjct: 594 TMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
++ ++ ++ R +++ + E + + + +N+++ C G
Sbjct: 654 GFSPSSLTHRRVLQACSQSRRLDVILD-IHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGY 554
A L M+ P+ T+ +LI G+
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGH 739
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/406 (19%), Positives = 163/406 (40%), Gaps = 27/406 (6%)
Query: 224 NAALEGCCYGLQ-----SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N L G C Q +++D I + V+G + L Y G + +
Sbjct: 139 NTLLAGLCRNGQVDAAAALADRGGGIHALDVIG-------WNTLIAGYCRVGDTPAALSV 191
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M G +V Y++L++G+ + G +++A + + G D + TY +
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG----VDPNVATYTPFIV 247
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
+ + KG+ + + +G+++D +++ G +A+++ EM+ G
Sbjct: 248 YYCRT---KGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG 304
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ Y + + K R E L+ ++ S G+ +D+ Y AL++
Sbjct: 305 AAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVK 364
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
R + +Y ++ L + H + L E+ E+ + ++S+I+
Sbjct: 365 DTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM-EEKSISPNVVTFSSVING 423
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
F K G L+ A R M PN TY +LI+G+ + + L ++H++
Sbjct: 424 FVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML------- 476
Query: 579 QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+G+K +VD+ + L + G + M + + + + +D Y
Sbjct: 477 CEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 146/353 (41%), Gaps = 9/353 (2%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ +A + G C S+A + M +G PN ++ L A G ++++ L
Sbjct: 273 DVVTLSALVAGLCRD-GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M G +V Y++L+ K G + T+ L N+ + TY ++
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSD-NLSPNGV---TYTVLID 387
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
+ NV +++E ++ S VV S +I+ V GL DKA M G
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFS---SVINGFVKRGLLDKATEYKRMMKERG 444
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ + Y + + K A ++ D+ G++++ D+L+ + + A
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
+LF+D + + +Y T++ GL + F E++ D + +N I+
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELM-DRNMLPDAVVYNVFINC 563
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
C G+ ++AK L M + +P+ TY ++I + + L + HE+K
Sbjct: 564 LCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 130/349 (37%), Gaps = 47/349 (13%)
Query: 209 LDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL 268
+D N M P+ N + C L +A+ + M +G++P++S++ + +
Sbjct: 546 MDRN---MLPDAVVYNVFINCLCM-LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCR 601
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
KG K ++L M ++ Y++L++G G +E A
Sbjct: 602 KGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA------------------ 643
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
K L N ++ A PS + R ++ AC D
Sbjct: 644 ------------------KYLLNEMVSA-GFSPSSLTHRR-----VLQACSQSRRLDVIL 679
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
I + M G + VY L+ C T +AT ++ ++ SG+ D ++ALI
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
S +AF+ + M I ++ T++ GL R L E +E +E
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE-MEKSGLEPN 798
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
++ + K +A R M+ F P TY +LI+ + A
Sbjct: 799 NLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 174/453 (38%), Gaps = 65/453 (14%)
Query: 217 KPNIYACNAALEGCCYGLQSVSD-AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+P+++AC L ++D KV + M+ +GV N + L + G EK
Sbjct: 162 RPHLHACTVLLNS--LAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKA 219
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLG-NLESASRTILLCLGGGNMEQSDFSKE--T 332
L S M + Y++LIS Y K G + E+ S ME+ + T
Sbjct: 220 DNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQ-------DRMEREGIKPDIVT 272
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++ GF + G ++ L E + P+ + +I L D+A + +
Sbjct: 273 YNSLIHGFCKEGRMREAMRLFKEIRDATPNHVTYT-----TLIDGYCRLNDLDQALRLRE 327
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM A G + Y L+ C+ R +A +L+ ++S ++ D + LI A
Sbjct: 328 EMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIG 387
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
D +SA + M EA GL LD+ +
Sbjct: 388 DMKSALKVKNRMVEA--------------GLK-----------LDQFT-----------Y 411
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
++IH FCK ++ AK L M+ F P+ TY L++GY + +VL + E R
Sbjct: 412 KALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVR 471
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ---AFM 629
KG+ + +L A + K D ++ QE D Y A+
Sbjct: 472 -------KGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYW 524
Query: 630 ENHKKLKVAKLRKRNFKKMEALIAFKNWAGLNA 662
+ K + L +K+ +I K + LNA
Sbjct: 525 KLGKANAASDLLDEMYKR-RLMITLKIYRALNA 556
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 10/228 (4%)
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+VD V +++ G D+A +LDEM CS + + + C+E R EA
Sbjct: 6 LVDTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFS 62
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
++ +G + D Y+ I+ ++ AF L + M E + +Y ++ GL+
Sbjct: 63 VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 122
Query: 485 ENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
+ R + A L+++VE P ++ + +I KAGR+E+A+R M+
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKT----YTVVIDGLSKAGRVEEARRIFVDMLGNGCR 178
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
P+ Y +LI+G + L+ +++ G + HNLV
Sbjct: 179 PDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLV 226
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 132/336 (39%), Gaps = 25/336 (7%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y+SL+ G++KLG L+ A + + G + + TY ++ G + G V+
Sbjct: 292 YTSLVDGFLKLGRLDEALLQLKEAVERGFIPDA----VTYTSIIDGLCKLGRVEEGCERF 347
Query: 354 IEAQK--LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
E + EP + +I + + KAH + +M G V Y L
Sbjct: 348 HEMRNRGYEPDAVTYA-----ALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 402
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
CK R AEA + + G V Y AL++ + + +A LFR M +
Sbjct: 403 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 462
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE---DA 528
SY I+ GL + A F E + R+ + +NS +H C+ RL+ D
Sbjct: 463 NLVSYNIIIRGLCRAGKLA-KAYFYFEKLLQRRLCPDVYTFNSFLHGLCQ--RLDTVGDG 519
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
M+ PN +Y L++G A L ++HE+ +G+ + +
Sbjct: 520 VELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMV-------SRGVAPDVVV 572
Query: 589 VDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ + L G D ++V + E + D W Y
Sbjct: 573 FNTLIRWLCIAGRVDEALEVF-RELERRSAPDAWSY 607
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 127/301 (42%), Gaps = 29/301 (9%)
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
L++E S MV ++ +I+G + L+ A + + G + D+ TY + G
Sbjct: 31 LLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGC--EPDYV--TYNVFIDGL 86
Query: 341 LQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
+ V L+ ++ +K P+ + ++ + G D+A +IL++M G
Sbjct: 87 CKAERVDDAFQLLKKMDEKKCLPTTVTYT-----ALVDGLLKAGRLDEAMAILEQMVEKG 141
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
S L Y + K R EA ++ +D+ +G + D Y ALI A
Sbjct: 142 NSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEAL 201
Query: 459 SLFRDMRE---AR-------IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
M E AR I++L ++ L + E A+ DE+ D +++
Sbjct: 202 VYLNQMVENGCARGVEPDVVIHNL------VIRQLCASGNLEDALAYFDEL--DDSLDLT 253
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+N ++ A CKA R E+A +++M + P TY SL++G++ + L+
Sbjct: 254 HFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLK 313
Query: 569 E 569
E
Sbjct: 314 E 314
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 161/421 (38%), Gaps = 56/421 (13%)
Query: 183 FLVDICRKNSNFVAFLKVFEECCR-IALDENLDFMK--------PNIYACNAALEGCCYG 233
L+D + + VAF V CR LDE ++ P+ N ++G C
Sbjct: 30 LLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKA 89
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
+ V DA ++++ M P ++ L G ++ + + M E G S +
Sbjct: 90 -ERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKT 148
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF------------- 340
Y+ +I G K G +E A R + LG G + Y ++ G
Sbjct: 149 YTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDA----FVYTALISGLAKIGKLDEALVYL 204
Query: 341 ---LQNGNVKG------LANLIIEAQKLEPSGIVVDRSVGFG---------------IIS 376
++NG +G + NL+I ++L SG + D F +++
Sbjct: 205 NQMVENGCARGVEPDVVIHNLVI--RQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVA 262
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
A +++A + + +M+ C L Y + + K R EA + + G
Sbjct: 263 ALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIP 322
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG-SYLTIMTGLMENHRPELMAAF 495
D Y ++I+ + F +MR R Y+ +Y ++ G M+
Sbjct: 323 DAVTYTSIIDGLCKLGRVEEGCERFHEMRN-RGYEPDAVTYAALIDGFMKAKMIPKAHRV 381
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++++ V V T +N I+ CKAGR+ +A T M TY +L++G+
Sbjct: 382 YRQMLQSGTV-VSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFC 440
Query: 556 T 556
+
Sbjct: 441 S 441
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++Y N+ L G C L +V D ++ E+M G PN S+ L G E +E
Sbjct: 497 PDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLE 556
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
+ M G + +V +++LI G ++ A
Sbjct: 557 IFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 589
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 133/309 (43%), Gaps = 18/309 (5%)
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET---YCEVVKGF 340
+ G + ++ L+ V+LG L SA + QS + T + ++ G
Sbjct: 233 DAGLPPEAKLFNVLMRDLVRLGELASAQNVF-------DEMQSRGVRRTVVSFNTMISGM 285
Query: 341 LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
+ G++ G L +++ +G+ D +I +G + A + ++M G
Sbjct: 286 CRAGDLDGAETL---HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
V+ + A+CK+ +L ++ G++ D Y+A++ ++D +SA +
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFC 520
+MR A + +Y T++ G + ++ +V + V + + ++I
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAE-GVGLDEVTYTALISGLS 461
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQK 580
KAGR DA+R L M+ EP++ TY +I+ + + L + E++ K G+K
Sbjct: 462 KAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK----GRK 517
Query: 581 GIKFEHNLV 589
+N++
Sbjct: 518 PGVVTYNVI 526
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 133/323 (41%), Gaps = 12/323 (3%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
L ++ A+ V + M GVR SF + G + L M+E G + +
Sbjct: 253 LGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYT 312
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK-GLANL 352
Y +LI G ++G +E A R + + G M+ + VV L + + K G A
Sbjct: 313 YGALIQGLCRVGRIEDA-RGVFEKMCGRGMKPN--------AVVFTILIDAHCKKGDAET 363
Query: 353 IIEAQK-LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++E + + G+ D I++ A I+ EM + G Y +
Sbjct: 364 MLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLID 423
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
YCKE A ++ ++ + G+ LD Y ALI + A + +M EA +
Sbjct: 424 GYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEP 483
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
+Y ++ + L E+ R + +N I++ FCK G++++A
Sbjct: 484 DNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGR-KPGVVTYNVIMNGFCKLGQMKNADML 542
Query: 532 LRRMIFLQFEPNDQTYLSLINGY 554
L MI + P+D TY L++G+
Sbjct: 543 LNAMINIGVSPDDITYNILLDGH 565
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/462 (20%), Positives = 180/462 (38%), Gaps = 77/462 (16%)
Query: 104 PVTNSLIAHLS-SLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAF 162
P+++S++ ++ S H + AF SV+ + K + T +TLLG + N A
Sbjct: 94 PISDSILNIVTNSYCLRHRIDCAF-SVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAV 152
Query: 163 ALVKCMFKNRYFMPFELWGGFLVDICRKNSNF---VAFLKVFEE---------------- 203
L K + + + P E+ G +++ K + ++ L++ E+
Sbjct: 153 VLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDA 212
Query: 204 -CCRIALDENLDFMK--------PNIYACNAALEGCCY---------------------- 232
C I LD ++ + PNI+ N+ ++G C
Sbjct: 213 LCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPN 272
Query: 233 ---------GL---QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
GL V DA++V+ M GV P+ ++ + Y L+G ++ + +
Sbjct: 273 VHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFN 332
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVK 338
++ + G + YS LI+GY K NL A + G + Q + TY ++
Sbjct: 333 VLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLF------GEISQKGLKPDTVTYSTILH 386
Query: 339 GFLQNGNVKGLANLIIEAQKLEPS-GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G ++ G + + E ++ P+ I + ++ FG GL ++A + ++
Sbjct: 387 GLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFK----YGLVEEAMLLFSKLERN 442
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
+ Y + CK R EA + + S GL DV Y+ +I F
Sbjct: 443 REDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEV 502
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
+ R M + +Y IM G +++ + +F+ E+
Sbjct: 503 KGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEM 544
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 140/324 (43%), Gaps = 11/324 (3%)
Query: 251 GVRPNESSFG-FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
G+ N +F L L+A + + +V + L+ E V Y ++++G K G+ E
Sbjct: 127 GIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEK 186
Query: 310 ASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE-AQKLEPSGIVVDR 368
+ ++L + GN + TY V+ ++ N+ NL+ E QK P I
Sbjct: 187 -TLSLLRIMEQGNTKPD---VRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYN 242
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
S +I LG +K ++L EM + + + + CKE + +A +++
Sbjct: 243 S----LIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRH 298
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ G++ D+ Y A+++ A +F +R+ I SY ++ G +
Sbjct: 299 MIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKN 358
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
E+ + ++ T +++I+H + GR+ DAK+ M+ + P+ +
Sbjct: 359 LAKAMQLFGEISQKG-LKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHS 417
Query: 549 SLINGYVTAEQYFSVLMMWHEIKR 572
+L+ GY ++++ +++R
Sbjct: 418 TLLFGYFKYGLVEEAMLLFSKLER 441
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
+Y + K T + L+ + + DV Y +I+A + +A +L +M
Sbjct: 170 MYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEM 229
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
++ I +Y +++ GL + + E + L E+V + + H ++ +I CK G+
Sbjct: 230 KQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMV-NLNINPNVHTFSILIDGLCKEGK 288
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF 584
+EDA +R MI EP+ TY ++++GY Q +R + KGIK
Sbjct: 289 VEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQV-------DRARRVFNVLRDKGIK- 340
Query: 585 EHNLVDAFLYALVKGGF 601
+ F Y+++ G+
Sbjct: 341 ----PNIFSYSILINGY 353
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 20/239 (8%)
Query: 382 GLSDKAH-----SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
GLS + H S+L M + Y + A CK+ A L+ ++ +
Sbjct: 177 GLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPP 236
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
++ Y++LI+ ++ +L +M I ++ ++ GL + + E +
Sbjct: 237 NIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVM 296
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
++E VE +++I+ +C G+++ A+R + +PN +Y LINGY
Sbjct: 297 RHMIEKG-VEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCK 355
Query: 557 AEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG-------FFDAVMQV 608
+ + ++ EI QKG+K + L+ L++ G FD +++V
Sbjct: 356 KKNLAKAMQLFGEI-------SQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRV 407
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 5/214 (2%)
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+++P V+D S F +N+ S+ EM G + + +YC H
Sbjct: 55 RMKPLPSVIDFSKLF---KTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRH 111
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL-KGSY 476
R A ++ +G+ +V ++ L+ A LF+ + +I + + Y
Sbjct: 112 RIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMY 171
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
T+M GL + E + L ++E + ++ +I A CK L+ A L M
Sbjct: 172 GTVMNGLSKRGHTEKTLSLL-RIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMK 230
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
PN TY SLI+G Q+ V + E+
Sbjct: 231 QKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEM 264
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 162/420 (38%), Gaps = 67/420 (15%)
Query: 195 VAFLKVFEECCRIAL-DENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIE 245
V + ++ C +L +E +DF+ PN+ L GC Q + ++++
Sbjct: 300 VIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQ-LGRCKRILS 358
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV--- 302
M G P+ F L + Y G +L M + G V Y+ LI G
Sbjct: 359 MMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE 418
Query: 303 ---KLGNLESASRT------------------ILLCLGGGNMEQSDFS------------ 329
L LE A + + CL G + +S
Sbjct: 419 KLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP 478
Query: 330 -KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY +V+ G L N + A L+ E K + +V D +I + +GL +A
Sbjct: 479 DTSTYSKVI-GLLCNASKVDNAFLLFEEMK--SNHVVPDVFTYTILIDSFCKVGLLQQAR 535
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
DEM GC+ + Y + AY K + + A +L + S G +V Y ALI+
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595
Query: 449 ITSQDFQSAFSLFRDMR-EARIYDLKG---------------SYLTIMTGLMENHRPELM 492
S + A ++ MR A I D+ +Y ++ GL + H+ +
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
LD V+ E ++++I FCK G+L++A+ +M + PN TY SLI+
Sbjct: 656 RDLLD-VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 122/318 (38%), Gaps = 46/318 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PNI+ A ++G C V +A +++ MSV G PN + L + G ++
Sbjct: 634 PNIFTYGALVDGLCKA-HKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+ + M+E G+ + YSSLI K L+ A + V+
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK-----------------------VL 729
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
L+N N+II + +I +G +D+A+ ++ M
Sbjct: 730 SRMLENSCA---PNVIIYTE----------------MIDGLCKVGKTDEAYRLMSMMEEK 770
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
GC + Y + + K + + +L+ + + G + Y LI + A
Sbjct: 771 GCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDA 830
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
L +M++ Y ++ G N + LDE+ E+ V + + +I
Sbjct: 831 HQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPI-IPAYRILID 887
Query: 518 AFCKAGRLEDAKRTLRRM 535
+FCKAGRLE A + M
Sbjct: 888 SFCKAGRLELALELHKEM 905
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 103/492 (20%), Positives = 188/492 (38%), Gaps = 62/492 (12%)
Query: 75 LHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIE 134
+H + + A+K K + P V N LI + N K V+ + E
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICG-----NEKLPSLDVLELAE 430
Query: 135 KN-PKLLDFQTVHTLLGSMRNANTA---------APAFALVKCMFKNRYFMPFELWGGFL 184
K ++LD H +L + +N A A+++++ M + + +
Sbjct: 431 KAYGEMLD---AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI 487
Query: 185 VDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCC-YGLQSVSDAEKV 243
+C + AFL +FEE + + P+++ ++ C GL + A K
Sbjct: 488 GLLCNASKVDNAFL-LFEE-------MKSNHVVPDVFTYTILIDSFCKVGL--LQQARKW 537
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+ M G PN ++ L + Y EL +M G +V Y++LI G+ K
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV---KGLANLIIEAQKLE 360
G +E A + G ++ D Y ++ G +++ N+ L + + +A K++
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDM----YFKIDDGNIRDPNIFTYGALVDGLCKAHKVK 653
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
+A +LD M+ GC VY + +CK +
Sbjct: 654 -------------------------EARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLD 688
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
EA + +S G +V Y +LI+ + A + M E Y ++
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL + + + A L ++E+ + ++I F KAG+++ +R+M
Sbjct: 749 DGLCKVGKTD-EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807
Query: 541 EPNDQTYLSLIN 552
PN TY LIN
Sbjct: 808 APNFVTYRVLIN 819
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 114/294 (38%), Gaps = 24/294 (8%)
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
E +L+ + F V Y+ +ISG + E A + M S TY
Sbjct: 285 EALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFL------SRMRSSSCIPNVVTYR 338
Query: 335 EVVKGFL---QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ G L Q G K + +++I G R + +I A G A+ +L
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMI------TEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG------NYDALI 445
+M CGC G VY + C + L + + G LD N L
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ F+ A+S+ R+M +Y ++ GL+ N A L E ++ V
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI-GLLCNASKVDNAFLLFEEMKSNHV 511
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ +I +FCK G L+ A++ M+ PN TY +LI+ Y+ A +
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 131/341 (38%), Gaps = 45/341 (13%)
Query: 276 VELESL--MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
V LE L + + G+ + Y++L+ +++ L++A + E SD
Sbjct: 215 VALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLV--------HREMSD------ 260
Query: 334 CEVVKGFLQNGNVKG-LANLIIEAQK-------LEPSGIVVDRSVGFGIISACVNLGLSD 385
GF +G G +L+ +A + +E +D + +IS L +
Sbjct: 261 ----SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFE 316
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A L M + C + Y L ++ + +++ + + G +++LI
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVE--- 501
A S D+ A+ L + M + Y ++ G+ N + P L L E
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEM 436
Query: 502 -DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
D V + + +++ C AG+ E A +R M+ F P+ TY +I A +
Sbjct: 437 LDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKV 496
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
+ +++ E+K H + D F Y ++ F
Sbjct: 497 DNAFLLFEEMKSN------------HVVPDVFTYTILIDSF 525
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 149/359 (41%), Gaps = 16/359 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN++ N + G C + + DAEK+ MSV + PN +F L Y G + +
Sbjct: 99 PNVFVYNVLIGGLCKE-KRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIG 157
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M + ++ ++SL+SG K +E A R +L + F TY +
Sbjct: 158 LRERMKKEKVEPSIITFNSLLSGLCKARRIEEA-RCMLNEIKCNGFVPDGF---TYSIIF 213
Query: 338 KGFLQNGNVKGLA-NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
G L++ + G A +L EA G+ +D +++ G +KA +L +
Sbjct: 214 DGLLKSDDGAGAALDLYREAIG---KGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVE 270
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G G +Y + YC+ A + + S GL+ + ++++I+ Q
Sbjct: 271 HGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDK 330
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTG---LMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A + M I +Y ++ G L R + ++E E P V +
Sbjct: 331 AEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNV----ISYG 386
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
S+I+ CK G++ +A+ LR M+ PN Y LI+G T + L + E+ +
Sbjct: 387 SLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSK 445
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 104/512 (20%), Positives = 209/512 (40%), Gaps = 70/512 (13%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEK------NPKL 139
+A K F ++ +L P++ N+LI D + + + E+ P +
Sbjct: 119 DAEKLFGEMSVRNLVPNRVTFNTLI-------DGYCKAGEVDVAIGLRERMKKEKVEPSI 171
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD-ICRKNSNFVAFL 198
+ F ++ + L R A +KC F+P + D + + + A L
Sbjct: 172 ITFNSLLSGLCKARRIEEARCMLNEIKC----NGFVPDGFTYSIIFDGLLKSDDGAGAAL 227
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
++ E A+ + + K + Y C+ L G C V AE+V++++ G+ P E
Sbjct: 228 DLYRE----AIGKGV---KIDNYTCSILLNGLCKE-GKVEKAEEVLKSLVEHGLVPGEVI 279
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ + Y G ++ + M G + ++S+I + ++ ++ A + +
Sbjct: 280 YNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMV 339
Query: 319 GGGNMEQSDFSKETYCEVVKGF----------------LQNG---NV---KGLANLIIEA 356
G G S ETY ++ G+ +NG NV L N + +
Sbjct: 340 GKGIAP----SVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKD 395
Query: 357 QKLEPSGIVVDRSVGFGI----------ISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
K+ + +V+ VG G+ I +G +A DEM+ G + Y
Sbjct: 396 GKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTY 455
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+K CK + EA ++ I+S+G DV Y++LI + + Q L+ M++
Sbjct: 456 NSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKK 515
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAG 523
+ ++ +++G +L +E+++ P V +N++IH + + G
Sbjct: 516 LGLKPTINTFHPLISGC-SKEGIKLKETLFNEMLQMNLSPDRVV----YNAMIHCYQETG 570
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
++ A + M+ + P+++TY SLI G++
Sbjct: 571 HVQKAFSLQKEMVDMGVRPDNKTYNSLILGHL 602
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 162/416 (38%), Gaps = 52/416 (12%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKN--PKLLD 141
++A + KSL + L P + + N+++ + D + RA ++ + + P +
Sbjct: 258 VEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGD---MDRAILTIEQMESRGLRPNCIA 314
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
F +V M+ + A VK M E + L+D + F ++
Sbjct: 315 FNSVIDKFCEMQMIDKAE---EWVKKMVGKGIAPSVETYN-ILIDGYGRLCVFSRCFQIL 370
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
EE ++EN + KPN+ + +L C + +AE V+ M GV PN + +
Sbjct: 371 EE-----MEENGE--KPNVIS-YGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNM 422
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L G + + M++ G + +V Y+SLI G K+G L+ A L G
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL--EPS--------------GIV 365
+ TY ++ G+ GN + L +KL +P+ GI
Sbjct: 483 HCPDVI----TYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIK 538
Query: 366 V---------------DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
+ DR V +I G KA S+ EM G Y +
Sbjct: 539 LKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLI 598
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ KE + +E LV D+ + GL + Y LI+ +DF A+ +R+M E
Sbjct: 599 LGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLE 654
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 141/358 (39%), Gaps = 61/358 (17%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
GV+ + + L +G EK E+ + E G V Y+++++GY ++G+++ A
Sbjct: 237 GVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRA 296
Query: 311 SRTILLCLGGG---NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
TI G N + + +CE+ VK + I A +E I++D
Sbjct: 297 ILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGI-APSVETYNILID 355
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
G+G L + + IL+EM G + Y + CK+ + EA ++
Sbjct: 356 ---GYG------RLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLR 406
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
D+ G+ + Y+ LI+ S T + A F +M + G TI+T
Sbjct: 407 DMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSK------NGIGATIVT------ 454
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+NS+I CK G+L++A+ + P+ TY
Sbjct: 455 ------------------------YNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITY 490
Query: 548 LSLINGYVTAEQYFSVLMMWHEIKR------------KISTDGQKGIKFEHNLVDAFL 593
SLI+GY A L ++ +K+ IS ++GIK + L + L
Sbjct: 491 NSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEML 548
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 140/351 (39%), Gaps = 32/351 (9%)
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
+ +++L M GF + Y + VKLG+L+ A ME + K
Sbjct: 48 DNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLA------------MELFETMKRR 95
Query: 333 YCEVVKGFLQNGNVKGLA--NLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLSDK 386
V F+ N + GL I +A+KL +V +R +I G D
Sbjct: 96 KV-VPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDV 154
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + + M + + L CK R EA ++ +I +G D Y + +
Sbjct: 155 AIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFD 214
Query: 447 ASITSQDFQ-SAFSLFRDM--REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
+ S D +A L+R+ + +I + S L + GL + + E L +VE
Sbjct: 215 GLLKSDDGAGAALDLYREAIGKGVKIDNYTCSIL--LNGLCKEGKVEKAEEVLKSLVEHG 272
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
V + +N+I++ +C+ G ++ A T+ +M PN + S+I+ + Q
Sbjct: 273 LVPGEVI-YNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEM-QMIDK 330
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
W +K+ + ++ + L+D + V F Q++E+ +E
Sbjct: 331 AEEW--VKKMVGKGIAPSVETYNILIDGYGRLCV----FSRCFQILEEMEE 375
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 2/165 (1%)
Query: 410 LKAYCKEHRT-AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
L + C E + ++ ++L + G G ++E+ + S+ F + LF++M
Sbjct: 2 LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG 61
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
K Y M ++ +L A L E ++ +V +N +I CK R+ DA
Sbjct: 62 FRPDKLVYGRAMLAAVKLGDLKL-AMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++ M PN T+ +LI+GY A + + + +K++
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKE 165
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 114/276 (41%), Gaps = 16/276 (5%)
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNL------GLSDKAHSILDEMNACGCSVGLGVYVPT 409
A++L + DR G S CV + G ++ +++ GC G Y
Sbjct: 258 ARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVL 317
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ YC+ L+ ++ G+ V Y A+I D SL +M+E +
Sbjct: 318 IDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGL 377
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
Y T++ L + A L+++V R + +N++I AFC+ G +E+A
Sbjct: 378 SPNVQIYNTVIYALCKCRSASQALAVLNQMVAS-RFDPDVVTFNTLIAAFCREGDVEEAL 436
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGY-VTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
+ LR I + EPN +Y LI+G+ V E + ++ I R + D
Sbjct: 437 KLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVT-------- 488
Query: 589 VDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ A ++ LV G D + V EK E +V D Y
Sbjct: 489 LGALIHGLVVSGQVDEALMVREKMAERQVMPDANIY 524
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 136/342 (39%), Gaps = 50/342 (14%)
Query: 241 EKVIETMSVLGVRPNESSFGFLAY-LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
E ++ M G+ PN + + Y L + + + L ++ F +V +++LI+
Sbjct: 366 ESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASR-FDPDVVTFNTLIA 424
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
+ + G++E A + + + + + ++ +Y ++ GF G V ++L++E +
Sbjct: 425 AFCREGDVEEALKLLREAI----RRELEPNQLSYTPLIHGFCVRGEVMVASDLLVE---M 477
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
G D +I V G D+A + ++M +Y + CK+
Sbjct: 478 IGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRML 537
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
+ A L++++ +Q D Y LI+ I S A +F M E KG Y I
Sbjct: 538 SAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEE------KGGYRDI 591
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ +N++I +CK+G + +A + M +
Sbjct: 592 VA------------------------------YNAMIKGYCKSGMMNEAVMCMSSMRKVG 621
Query: 540 FEPNDQTYLSLINGY-----VTAEQYFSVLMMWHEIKRKIST 576
P++ TY +LI+GY + A F MM K I T
Sbjct: 622 CIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVT 663
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 118/298 (39%), Gaps = 43/298 (14%)
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV-KGLANLIIE 355
++ G G +E R I G G + + F Y ++ G+ + G+V +GL L
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVF----YNVLIDGYCRRGDVGRGLLLL--- 334
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
++E GI+ II K S+L EM G S + +Y + A CK
Sbjct: 335 -GEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCK 393
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
++A ++ + +S DV ++ LI A D + A L R+ + + S
Sbjct: 394 CRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLS 453
Query: 476 YLTIMTG-----------------LMENHRPELM-----------------AAFLDEVVE 501
Y ++ G + H P+++ A + E +
Sbjct: 454 YTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMA 513
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ +V + +N +I CK L AK L M+ + +P+ Y +LI+G++ +++
Sbjct: 514 ERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDK 571
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 127/341 (37%), Gaps = 19/341 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ N + C V +A K++ + PN+ S+ L + + ++G +
Sbjct: 414 PDVVTFNTLIAAFCRE-GDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASD 472
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M G + +V +LI G V G ++ A L+ Q Y ++
Sbjct: 473 LLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEA----LMVREKMAERQVMPDANIYNVLI 528
Query: 338 KGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
G + + NL++E QK++P D+ V +I + A I + M
Sbjct: 529 SGLCKKRMLSAAKNLLVEMLEQKVQP-----DKFVYTTLIDGFIRSDKLSDARKIFEFME 583
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y +K YCK EA + + G D Y LI+ D +
Sbjct: 584 EKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIK 643
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTG---LMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+A DM + R +Y +++ G + E++ A + P V H +
Sbjct: 644 AALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNV---VH-Y 699
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+I + K + A M+ PND T L+NG
Sbjct: 700 TVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNG 740
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 90/462 (19%), Positives = 167/462 (36%), Gaps = 63/462 (13%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
+ Q +T++ ++ +A+ A A++ M +R+ + + CR+ + LK+
Sbjct: 380 NVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREG-DVEEALKL 438
Query: 201 FEECCRIALDENL--------------------DFM--------KPNIYACNAALEGCCY 232
E R L+ N D + P++ A + G
Sbjct: 439 LREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVV 498
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV 292
Q V +A V E M+ V P+ + + L K + L M E
Sbjct: 499 SGQ-VDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKF 557
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLA 350
Y++LI G+++ L A + ME+ ++ Y ++KG+ ++G +
Sbjct: 558 VYTTLIDGFIRSDKLSDARKIFEF------MEEKGGYRDIVAYNAMIKGYCKSGMMNEAV 611
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
+ +K+ G + D +I G A L +M C + Y +
Sbjct: 612 MCMSSMRKV---GCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLI 668
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM------ 464
YC T A L + S GL +V +Y LI + A + F M
Sbjct: 669 CGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCS 728
Query: 465 -REARIYDLKGSYLTIMTGLMENH---------RPELMAAFLDEVVE--DPRVEVKTHDW 512
+A ++ L G++ ++ + L+ F + + DPR+ +
Sbjct: 729 PNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISA----Y 784
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
N+II + C+ L A +M P+ T+LSL+ G+
Sbjct: 785 NAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGF 826
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 107/516 (20%), Positives = 209/516 (40%), Gaps = 56/516 (10%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
++ S T L+ ++D+A+ ++ + + P +S+IA L Q + +A
Sbjct: 200 DVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQ---AMDKAM 256
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
V+ + KN + D T +++L ++ A +K M + + +
Sbjct: 257 -EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315
Query: 187 ICRKNSNFVAFLKVFEECCRIALDEN-----------------------LDFM-----KP 218
+C KN K+F+ + L+ + LD M +P
Sbjct: 316 LC-KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQP 374
Query: 219 NIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQEKIV 276
+ + N + C Y Q V A V M G+ PN +G + + G + + ++
Sbjct: 375 DHHVFNILI--CAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
E +++E G + ++ Y+SLI G + A IL L G + F + +
Sbjct: 433 YFEQMIDE-GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF----FNSI 487
Query: 337 VKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+ + G V IE++KL G+ D +I C G D+A +L
Sbjct: 488 IDSHCKEGRV-------IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA 540
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M + G + Y + YC+ R +A L ++ SSG+ ++ Y+ +++ ++
Sbjct: 541 SMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTR 600
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH-RPELMAAFLDEVVEDPRVEVKTHD 511
+A L+ + ++ +Y I+ GL +N+ E + F + + D ++E +T
Sbjct: 601 RTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT-- 658
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+N +I A K GR+++AK P+ +TY
Sbjct: 659 FNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 4/178 (2%)
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV---MDISSSGL 434
C + SD +L M GC + Y LK C E+R+ EA +L+ D G
Sbjct: 138 CADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGS 197
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
DV +Y+ ++ D A+S + +M + I +Y +I+ L + +
Sbjct: 198 PPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAME 257
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
L+ +V++ V +NSI+H +C +G+ ++A TL++M EPN TY SL+N
Sbjct: 258 VLNTMVKNG-VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMN 314
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 181/437 (41%), Gaps = 28/437 (6%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D + + LL + + N + A L+ M +R GG D+ N+ F K
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDR-------GGGSPPDVVSYNTVLNGFFKE 214
Query: 201 FE-ECCRIALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
+ + E LD + P++ ++ + C Q++ A +V+ TM GV P+ +
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKA-QAMDKAMEVLNTMVKNGVMPDCMT 273
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ + + Y G ++ + M G +V YSSL++ K G + +R I +
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR-STEARKIFDSM 332
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGII 375
+E D + TY +++G+ G + L +L++ +GI D V +I
Sbjct: 333 TKRGLE-PDIA--TYRTLLQGYATKGALVEMHALLDLMVR------NGIQPDHHVFNILI 383
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
A D+A + +M G + + Y + CK +A + GL
Sbjct: 384 CAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLT 443
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
++ Y +LI T + A L +M + I + +I+ + R
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 503
Query: 496 LDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
D +V R+ VK +N++I C AG++++A + L M+ + +P+ TY +LING
Sbjct: 504 FDLMV---RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 560
Query: 554 YVTAEQYFSVLMMWHEI 570
Y + L ++ E+
Sbjct: 561 YCRVSRMDDALALFKEM 577
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/399 (18%), Positives = 156/399 (39%), Gaps = 55/399 (13%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D ++PN+ ++ + C +S ++A K+ ++M+ G+ P+ +++ L YA KG
Sbjct: 300 DGVEPNVVTYSSLMNYLCKNGRS-TEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALV 358
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
++ L LM G ++ LI Y K ++ A M Q +
Sbjct: 359 EMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF------SKMRQHGLNPNVV 412
Query: 334 C--EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
C V+ ++G+V + ++ +++ G+ + V +I DKA ++
Sbjct: 413 CYGTVIDVLCKSGSVD---DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI 469
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
EM G + + + ++CKE R E+ +L + G++ D+ Y+ LI+ +
Sbjct: 470 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA 529
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
A L M + +P+++
Sbjct: 530 GKMDEATKLLASMVSVGV------------------KPDIVT------------------ 553
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+ ++I+ +C+ R++DA + M+ PN TY ++ G + + ++ I
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
+ G + E + + L+ L K D +++ +
Sbjct: 614 K-------SGTQLELSTYNIILHGLCKNNLTDEALRMFQ 645
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 161/410 (39%), Gaps = 26/410 (6%)
Query: 55 TQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLS 114
T ++ + + N+ + + ++ + EA K F S+T L P IA
Sbjct: 293 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD-------IATYR 345
Query: 115 SLQDNHNLKRAFASVVYVIE---KNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKN 171
+L + K A + +++ +N D + L+ + A LV +
Sbjct: 346 TLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM-LVFSKMRQ 404
Query: 172 RYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCC 231
P + G ++D+ K+ + + FE+ +DE L PNI + + G C
Sbjct: 405 HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ----MIDEGL---TPNIIVYTSLIHGLC 457
Query: 232 YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQM 291
AE++I M G+ N F + + +G + +L LM G +
Sbjct: 458 T-CDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 516
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLAN 351
+ Y++LI G G ++ A++ + + G + D TY ++ G+ + V + +
Sbjct: 517 ITYNTLIDGCCLAGKMDEATKLLASMVSVG--VKPDIV--TYGTLINGYCR---VSRMDD 569
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
+ +++ SG+ + I+ + + A + + G + L Y L
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 629
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
CK + T EA ++ ++ + LQL+ ++ +I A + A LF
Sbjct: 630 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLF 679
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 8/247 (3%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+++E GIV DR G++SA GL D+A S +D M A G S+GL Y+ A +
Sbjct: 276 EEMEKLGIVPDRITFTGLVSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARA 335
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
+ EA L + G +L + +Y+AL+ A + ++ A F +++ + S+
Sbjct: 336 RKPREAYGLFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSW 395
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
++++ + E L E ++ + W ++ A+ K G E A+ M+
Sbjct: 396 SSLISACANAGQAERALEVL-ERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAML 454
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYAL 596
PN+ + SL++ Y Q W ++ I + G+K + + AL
Sbjct: 455 DSGCPPNEVAWCSLLSAYEKGRQ-------WKKVLYTIEKLEELGMKLDVVAWSTTISAL 507
Query: 597 VKGGFFD 603
K G ++
Sbjct: 508 AKAGQWE 514
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/389 (18%), Positives = 150/389 (38%), Gaps = 20/389 (5%)
Query: 226 ALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF 285
AL C S A ++ E M LG+ P+ +F L GL ++ +M
Sbjct: 257 ALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSATTAAGLWDRAQSFIDMMQAR 316
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
GFS + Y + + A + L G + E+Y ++ + +
Sbjct: 317 GFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQG----YELKLESYNALLCAYERTAQ 372
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
+ I Q G+ D +ISAC N G +++A +L+ M C +
Sbjct: 373 WEDAMRTFIWIQD---KGLTPDVMSWSSLISACANAGQAERALEVLERMKTSDCQPNVVS 429
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
+ LKAY K +A ++ + SG + + +L+ A + ++ +
Sbjct: 430 WCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLE 489
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKA 522
E + ++ T ++ L + + EL ++ + P + ++S+I A+
Sbjct: 490 ELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVT----YSSLIKAYGDV 545
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGI 582
G E A+ + M+ + PN Q +L+ Y ++ V++ + S + Q G+
Sbjct: 546 GLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFE------SMEPQYGV 599
Query: 583 KFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
+ + A +A G + ++ +++
Sbjct: 600 EPDKYAYAAIFWACWTCGEWQRAVKYIDR 628
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 8/193 (4%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
IE + LG++ + ++ A G E E M + G +V YSSLI Y
Sbjct: 484 TIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYG 543
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
+G E A L L G + + C +++ + G K L +II + +EP
Sbjct: 544 DVGLWEKAESVFKLMLRVGIRP----NPQACCALLRAY---GKGKELEKVIIFFESMEPQ 596
Query: 363 -GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
G+ D+ I AC G +A +D M GC+ +Y + Y + +
Sbjct: 597 YGVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDK 656
Query: 422 ATQLVMDISSSGL 434
A Q++ + S L
Sbjct: 657 AMQVLERMGSGSL 669
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 157/389 (40%), Gaps = 22/389 (5%)
Query: 193 NFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
N +A +K F+ + + + ++Y CN + C Q A + + LG
Sbjct: 79 NVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCL-ASSFLGKLMKLGF 137
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
P+ +F L + L E+ + + + M E G +V Y+++I K G++++A
Sbjct: 138 EPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALS 197
Query: 313 TILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLIIEA---QKLEPSGIVVD 367
ME + Y +V G +G + A+L++ +K++P I +
Sbjct: 198 LF------NQMENYGIRPDVVMYTSLVNGLCNSGRWRD-ADLLLRGMMKRKIKPDVITFN 250
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+I A V G A + +EM + + Y + C E R EA Q+
Sbjct: 251 -----ALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFY 305
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ + G DV Y +LI + + A +F +M + + +Y T++ G
Sbjct: 306 LMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVG 365
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE---PND 544
+P + +V V +N ++H C G++ A M + + PN
Sbjct: 366 KPNVAQEVFGHMVSRG-VPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNI 424
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+TY L++G + LM++ +++++
Sbjct: 425 RTYNVLLHGLCYNGKLEKALMVFGDMQKR 453
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/401 (19%), Positives = 157/401 (39%), Gaps = 53/401 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+I+ + + G C G + +A ++ M +G++P+ + + G + +
Sbjct: 138 EPDIFTFTSLINGFCLG-NRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNAL 196
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L + M +G +V Y+SL++G G A L L G + T+ +
Sbjct: 197 SLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD----LLLRGMMKRKIKPDVITFNAL 252
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ F++ G + L E ++ + + + +I+ G D+A + M
Sbjct: 253 IDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYT---SLINGLCMEGRLDEARQMFYLMET 309
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA-------SI 449
GC + Y + +CK + +A ++ ++S GL + Y LI+ ++
Sbjct: 310 KGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNV 369
Query: 450 TSQDF----------------------------QSAFSLFRDMREARIYDLKG---SYLT 478
+ F A +F DM++ I + +Y
Sbjct: 370 AQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNV 429
Query: 479 IMTGLMENHRPE-LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++ GL N + E + F D D +++ + II CKAG+++DA +
Sbjct: 430 LLHGLCYNGKLEKALMVFGDMQKRD--MDIGIITYTIIIQGMCKAGKVKDALNLFCSLPS 487
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
+PN TY ++I+G +++ H + RK+ DG
Sbjct: 488 KGVKPNVVTYTTMISGLFRE----GLMLEAHVLFRKMKEDG 524
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 151/390 (38%), Gaps = 23/390 (5%)
Query: 80 LTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL 139
L N +EA + + P + ++I SL N ++ A S+ +E
Sbjct: 153 LGNRIEEAMSMVNQMVEMGIKPDVVIYTTII---DSLCKNGHVDNAL-SLFNQMENYGIR 208
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLK 199
D +L+ + N+ A L++ M K R P + L+D K + +
Sbjct: 209 PDVVMYTSLVNGLCNSGRWRDADLLLRGMMK-RKIKPDVITFNALIDAFVKEGKLLDAKE 267
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
++ E ++++ PNI+ + + G C + +A ++ M G P+ ++
Sbjct: 268 LYNEMIQMSI-------APNIFTYTSLINGLCME-GRLDEARQMFYLMETKGCFPDVVAY 319
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
L + E +++ M++ G + + Y++LI G+ +G A
Sbjct: 320 TSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVF----- 374
Query: 320 GGNMEQSDFSK--ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD-RSVGFGIIS 376
G+M TY ++ NG V + + QK E G+ + R+ +
Sbjct: 375 -GHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHG 433
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
C N G +KA + +M +G+ Y ++ CK + +A L + S G++
Sbjct: 434 LCYN-GKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKP 492
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+V Y +I A LFR M+E
Sbjct: 493 NVVTYTTMISGLFREGLMLEAHVLFRKMKE 522
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 79/185 (42%), Gaps = 8/185 (4%)
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
NY ++ + S F A LF M E+R + ++ + + + +++
Sbjct: 38 NYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKH- 96
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
++ V + N +++ FC++ + A L +++ L FEP+ T+ SLING+ +
Sbjct: 97 LQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNR 156
Query: 560 YFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFV 619
+ M +++ + GIK + + + +L K G D + + + + +
Sbjct: 157 IEEAMSMVNQMV-------EMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRP 209
Query: 620 DKWKY 624
D Y
Sbjct: 210 DVVMY 214
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 126/293 (43%), Gaps = 14/293 (4%)
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET---YCEVVKGF 340
+ G + ++ L+ V+LG L SA + QS + T + ++ G
Sbjct: 109 DAGLPPEAKLFNVLMRDLVRLGELASAQNVF-------DEMQSRGVRRTVVSFNTMISGM 161
Query: 341 LQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCS 400
+ G++ G L +++ +G+ D +I +G + A + ++M G
Sbjct: 162 CRAGDLDGAETL---HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
V+ + A+CK+ +L ++ G++ D Y+A++ ++D +SA +
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFC 520
+MR A + +Y T++ G + ++ +V + V + + ++I
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEG-VGLDEVTYTALISGLS 337
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
KAGR DA+R L M+ EP++ TY +I+ + + L + E++ K
Sbjct: 338 KAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK 390
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 133/323 (41%), Gaps = 12/323 (3%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
L ++ A+ V + M GVR SF + G + L M+E G + +
Sbjct: 129 LGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYT 188
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK-GLANL 352
Y +LI G ++G +E A R + + G M+ + VV L + + K G A
Sbjct: 189 YGALIQGLCRVGRIEDA-RGVFEKMCGRGMKPN--------AVVFTILIDAHCKKGDAET 239
Query: 353 IIEAQK-LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++E + + G+ D I++ A I+ EM + G Y +
Sbjct: 240 MLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLID 299
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
YCKE A ++ ++ + G+ LD Y ALI + A + +M EA +
Sbjct: 300 GYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEP 359
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
+Y ++ + L E+ R + +N I++ FCK G++++A
Sbjct: 360 DNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGR-KPGVVTYNVIMNGFCKLGQMKNADML 418
Query: 532 LRRMIFLQFEPNDQTYLSLINGY 554
L MI + P+D TY L++G+
Sbjct: 419 LNAMINIGVSPDDITYNILLDGH 441
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 119/280 (42%), Gaps = 17/280 (6%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+++ V+ D A + + M + + Y +K YCK +T +A + + D+ + G
Sbjct: 210 LMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 269
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM-ENHRPELM 492
+ D Y +I+A DF S +L+++M E I ++ ++ GL E E
Sbjct: 270 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGY 329
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
F + + + + V + +I + K+G +EDA R L RMI F+P+ TY ++N
Sbjct: 330 TVFENMIRKGSKPNVAI--YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 387
Query: 553 GYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
G + L +H + G+ + + L K G D ++ E+
Sbjct: 388 GLCKNGRVEEALDYFHTCRF-------DGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 440
Query: 613 QEMKVFVDKWKYK---QAFMENHKKLKVAKLRKRNFKKME 649
E D + Y AF ++ K + L FK+ME
Sbjct: 441 SEKGCTRDSYCYNALIDAFTKHRKVDEAIAL----FKRME 476
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 163/442 (36%), Gaps = 61/442 (13%)
Query: 88 WKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHT 147
W+ K N + P+ N L+ L S + +R F V+E D T +T
Sbjct: 192 WRKMKE---NGIEPTLYTYNFLMNGLVSAMFVDSAERVFE----VMESGRIKPDIVTYNT 244
Query: 148 LLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRI 207
++ A A ++ M + R ++ ++ C +S+F + + +++E
Sbjct: 245 MIKGYCKAGQTQKAMEKLRDM-ETRGHEADKITYMTMIQACYADSDFGSCVALYQE---- 299
Query: 208 ALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
+DE + P+ ++ + G C +++ V E M G +PN + + L YA
Sbjct: 300 -MDEKGIQVPPHAFS--LVIGGLCKE-GKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 355
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
G E + L M + GF +V YS +++G K G +E A C G S
Sbjct: 356 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 415
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
F Y ++ G + G V D+A
Sbjct: 416 F----YSSLIDGLGKAGRV--------------------------------------DEA 433
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI-SSSGLQLDVGNYDALIE 446
+ +EM+ GC+ Y + A+ K + EA L + G V Y L+
Sbjct: 434 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 493
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ A L+ M + I + + TGL + + LDE+ P
Sbjct: 494 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELA--PMGV 551
Query: 507 VKTHDWNSIIHAFCKAGRLEDA 528
+ +I+ CKAGR+++A
Sbjct: 552 ILDAACEDMINTLCKAGRIKEA 573
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 130/355 (36%), Gaps = 84/355 (23%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKV------------IETMSVLGVRPNESSFGFLA 263
+KP+I N ++G C Q+ EK+ I M+++ +S FG
Sbjct: 235 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 294
Query: 264 YLYAL---KGLQ--------------------EKIVELESLMNEFGFSSQMVFYSSLISG 300
LY KG+Q E E+++ + G + Y+ LI G
Sbjct: 295 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK-GSKPNVAIYTVLIDG 353
Query: 301 YVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQK 358
Y K G++E A R + M F + TY VV G +NG V+ +
Sbjct: 354 YAKSGSVEDAIRLL------HRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF---HT 404
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
G+ ++ +I G D+A + +EM+ GC T +YC
Sbjct: 405 CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC---------TRDSYC---- 451
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG-SYL 477
Y+ALI+A + A +LF+ M E D +Y
Sbjct: 452 ----------------------YNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 489
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+++G+ + HR E D ++ D + + ++ C +G++ A + L
Sbjct: 490 ILLSGMFKEHRNEEALKLWDMMI-DKGITPTAACFRALSTGLCLSGKVARACKIL 543
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 136/667 (20%), Positives = 247/667 (37%), Gaps = 140/667 (20%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
N+ + ++ + N +A K + N P+ N+L L+ K A
Sbjct: 232 NVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTL---LNWYCKKGRYKAAI 288
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
+ Y+I K + D T + + ++ + +A A+ L+K M + P E+ L++
Sbjct: 289 ELIDYMICKGIEA-DVCTYNVFIDNLCTNHRSAKAYLLLKKM-RKEMISPNEVTYNTLIN 346
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIET 246
K +VF E + L PN NA + G C+ + +A ++++
Sbjct: 347 GFVKEGKIGVAAQVFNEMSKFDLS-------PNCVTYNALIGGHCH-VGDFEEALRLLDH 398
Query: 247 MSVLGVRPNESSFGFL------------------------------AYLYALKGL----- 271
M G+R NE ++G L AY + GL
Sbjct: 399 MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGM 458
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
++ V+L M + G + ++ YSSLI+G+ ++GN++SA I G + +K
Sbjct: 459 LDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV----LNKI 514
Query: 332 TYCEVVKGFLQNGNVKG------------------LANLII----------EAQK----- 358
Y ++ F Q+GNV N+++ EA+K
Sbjct: 515 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 574
Query: 359 ----LEPSGIVVDRSV-GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
L P+ I D + G+G I +N A S D+M CG Y LK
Sbjct: 575 SRIGLVPNSITYDCIINGYGSIGDPLN------AFSFFDDMIKCGQHPSFFTYGSLLKGL 628
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK EA + + + +D Y+ L+ + S + A +LF M + +
Sbjct: 629 CKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 688
Query: 474 GSYLTIMTGLME----------------------NH--------------RPELMAAFLD 497
+Y +++TGL NH P+ F +
Sbjct: 689 YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 748
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
E+++ T +N+II + + G++ A M + PN TY L++G+
Sbjct: 749 EMMKKGTCP-DTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKK 807
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
+ L ++ ST ++GI + + + L K G D ++++ K
Sbjct: 808 QALLRYLSLY-------STMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGT 860
Query: 618 FVDKWKY 624
D++ +
Sbjct: 861 LADQFTF 867
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 139/343 (40%), Gaps = 54/343 (15%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAE-----KVIETMSVLGVRPNESSFGFLAYLYALKGL 271
KP++Y CN L V D + MS G+ PN +F L ++G
Sbjct: 195 KPSVYTCNMILA------SMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGN 248
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
+K L M E GF +V Y++L++ Y K G ++A +E D+
Sbjct: 249 LKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA------------IELIDYM-- 294
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+ KG IEA + + +D + C N S KA+ +L
Sbjct: 295 ----ICKG--------------IEAD-VCTYNVFID--------NLCTN-HRSAKAYLLL 326
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+M S Y + + KE + A Q+ ++S L + Y+ALI
Sbjct: 327 KKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHV 386
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
DF+ A L M A + + +Y T++ GL ++ + EL L+ + + V V
Sbjct: 387 GDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMV-VGHIA 445
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ +I CK G L++A + + M P+ TY SLING+
Sbjct: 446 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGF 488
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 7/225 (3%)
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
K++ M + G ++ +F L Y+ G K +L + MN G Y+ + +G
Sbjct: 850 KLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 909
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
K ++ + L G + + Y ++ G + G+++G L E + L
Sbjct: 910 NKKSAFRESTVVLHEMLENGVIPK----HAQYITLINGMCRVGDIQGAFKLKDEMEALGF 965
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
V S ++ ++ G ++ A +LD M + + + +C++ + AE
Sbjct: 966 GSHEVAES---AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAE 1022
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
A +L + GL+LDV Y+ LI + D +AF L+ +MR
Sbjct: 1023 ALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRH 1067
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 88/447 (19%), Positives = 159/447 (35%), Gaps = 36/447 (8%)
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVA 196
P +D +TLL + A AL M +N + L +CRK
Sbjct: 648 PGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG----- 702
Query: 197 FLKVFEECCRIALDENLDFMKPN--IYACNAALEGCCYGLQSVSDAEKVI---ETMSVLG 251
K C + PN +Y C GL + E M G
Sbjct: 703 --KAVTAVCLFGTAMGRGTLFPNHVMYTCLVD------GLSKAGHPKAAFYFFEEMMKKG 754
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
P+ +F + + +G K + S M +G + Y+ L+ G+ K +
Sbjct: 755 TCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK-----KQA 809
Query: 312 RTILLCLGGGNMEQSDF-SKETYCEVVKGFLQNG----NVKGLANLIIEAQKLEPSGIVV 366
L L M + F K T+ ++ G ++G VK L +I+E G +
Sbjct: 810 LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME-------GTLA 862
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D+ +I+ G KA +++ MN G Y K+ E+T ++
Sbjct: 863 DQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVL 922
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
++ +G+ Y LI D Q AF L +M + + ++ GL+
Sbjct: 923 HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHC 982
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ E LD ++ R+ + +++H FC+ ++ +A + M + +
Sbjct: 983 GKTEDAMLVLDHMLR-MRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVA 1041
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRK 573
Y LI G + ++ E++ +
Sbjct: 1042 YNVLIMGMCANGDSAAAFELYEEMRHR 1068
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/165 (18%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ Y KE A + + G + V + ++ + + + + +SLFR+M + I
Sbjct: 170 IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGI 229
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
G++ ++ GL + L ++ E+ V +N++++ +CK GR + A
Sbjct: 230 CPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIV-TYNTLLNWYCKKGRYKAAI 288
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+ MI E + TY I+ T + ++ ++++++
Sbjct: 289 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEM 333
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 166/411 (40%), Gaps = 42/411 (10%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
F+E RI + + KP++ ++ C +SDA+ V M +P+ ++
Sbjct: 325 FDEAYRILAEMENEGCKPDVITHTVLIQVLC-DAGRISDAKDVFWKMKKSDQKPDRVTYI 383
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L +A G + ++E+ + M G++ +V Y+++I ++G + A
Sbjct: 384 TLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF------ 437
Query: 321 GNMEQSDFSKE--TYCEVVKGFLQ---------------------NG-------NVKGLA 350
M+Q E +Y ++ GFL+ NG N G +
Sbjct: 438 DEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKS 497
Query: 351 NLIIEA----QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
I+A + ++ GIV D G ++ G A + E+ A G S Y
Sbjct: 498 GESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITY 557
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+K K + EA ++ D+ + DV ++LI+ + A+ +F ++E
Sbjct: 558 TMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKE 617
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
+ G+Y T++ GL + + + L+E+ +N+I+ CK G +
Sbjct: 618 MNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS-NYPPNLITYNTILDCLCKNGAVN 676
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTD 577
DA L M P+ +Y ++I G V E+Y ++ ++K+ + D
Sbjct: 677 DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 727
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 126/317 (39%), Gaps = 47/317 (14%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AE + M LG P+E ++ L E++++++ M+ G+ S V Y+++IS
Sbjct: 853 AEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIIS 912
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
G VK LE A N+ FS TY ++ G L+ G +
Sbjct: 913 GLVKSRRLEQAIDLYY------NLMSQGFSPTPCTYGPLLDGLLKAGRI----------- 955
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ A ++ +EM GC +Y L +
Sbjct: 956 ---------------------------EDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 988
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
T + L D+ G+ D+ +Y +I+ + + FR + E + +Y
Sbjct: 989 NTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYN 1048
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++ GL ++ R E + +E ++ + + +NS+I KAG+ +A + ++
Sbjct: 1049 LLIDGLGKSKRLEEAVSLFNE-MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLT 1107
Query: 538 LQFEPNDQTYLSLINGY 554
++PN TY +LI GY
Sbjct: 1108 KGWKPNVFTYNALIRGY 1124
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 142/340 (41%), Gaps = 44/340 (12%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N L+ C +V+DA ++ +M+ G P+ SS+ + Y +V+
Sbjct: 657 PNLITYNTILDCLCKN-GAVNDALDMLYSMTTKGCIPDLSSYNTVIY---------GLVK 706
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
E F QM + +L+ D++ T C ++
Sbjct: 707 EERYNEAFSIFCQM--------------------KKVLI---------PDYA--TLCTIL 735
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
F++ G +K A II+ L+P G DRS ++ + ++K+ + + +
Sbjct: 736 PSFVKIGLMKE-ALHIIKEYFLQP-GSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASS 793
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G ++ P +K CK+ + EA +LV S G+ L G+Y++LI + A
Sbjct: 794 GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIA 853
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
LF +M+E + +Y ++ + ++ R E M +E + E +N+II
Sbjct: 854 EGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE-MHRKGYESTYVTYNTIIS 912
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
K+ RLE A ++ F P TY L++G + A
Sbjct: 913 GLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 952
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 156/391 (39%), Gaps = 21/391 (5%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
V D +V + M V+ N +F L GL+ V L +M E G Y+
Sbjct: 185 VGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVAL-PVMKEAGIVLNAYTYN 243
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI-- 353
L+ VK G A + + G + S TY ++ F + +V+ + L+
Sbjct: 244 GLVYFLVKSGFDREALEVYKVMMVDGVVP----SVRTYSVLMVAFGKRRDVETVLWLLRE 299
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
+EA ++P+ V ++ ++ D+A+ IL EM GC + + ++
Sbjct: 300 MEAHGVKPN--VYSYTICIRVLGQARRF---DEAYRILAEMENEGCKPDVITHTVLIQVL 354
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C R ++A + + S + D Y L++ + + QS ++ M+ D
Sbjct: 355 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNV 414
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y ++ L + R DE+ + V + + +NS+I F KA R DA +
Sbjct: 415 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVP-EQYSYNSLISGFLKADRFGDALELFK 473
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFL 593
M +PN T++ IN Y + + + + +K KGI + +A L
Sbjct: 474 YMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK-------SKGIVPDVVAGNAVL 526
Query: 594 YALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ L K G +V + + M V D Y
Sbjct: 527 FGLAKSGRLGMAKRVFHELKAMGVSPDTITY 557
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ +EM+ G Y + K R +A L ++ S G Y L++ +
Sbjct: 891 VQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLL 950
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-----PELMAAFLDEVVEDPR 504
+ + A +LF +M E Y K + TI L+ HR ++ F D V +
Sbjct: 951 KAGRIEDAENLFNEMLE---YGCKAN-CTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN 1006
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
++K+ + II CKAG+L D R+++ + EP+ TY LI+G +++ +
Sbjct: 1007 PDIKS--YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAV 1064
Query: 565 MMWHEIKRK 573
+++E+++K
Sbjct: 1065 SLFNEMQKK 1073
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 142/326 (43%), Gaps = 39/326 (11%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR-PNESSFGFLA-YLYALKGLQE 273
++PN N ++ C + A +V+E M G+ PN ++ L L+A +E
Sbjct: 193 LQPNTCIFNILVKHHCKN-GDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKE 251
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ E ++++ G S V ++ +I+G+ + G +E A + DF K+
Sbjct: 252 AVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMIL------------DFMKKNG 299
Query: 334 CE--------VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV-NLGLS 384
C ++ GF + G ++ + E +K +G+ +D +VG+ + C+ G
Sbjct: 300 CNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKK---TGLKLD-TVGYTTLMNCLCRNGEI 355
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A +L EM A C Y L+ E R+ EA Q++ G+ L+ G+Y +
Sbjct: 356 DEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRII 415
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL----MAAFLD-EV 499
+ A + + + A M + I+ ++ ++ L E+ E+ + FL +
Sbjct: 416 LNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLCESGNTEIGVRVLIGFLGIGL 475
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRL 525
+ P+ W +++ + CK +L
Sbjct: 476 IPAPK------SWGAVVESICKERKL 495
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 12/262 (4%)
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE---TYCEVVKGFLQNGNVKGL 349
++ L+ + K G+++SA R + M++S S TY ++ K
Sbjct: 199 IFNILVKHHCKNGDIDSAFRVV------EEMKRSGISYPNSITYSTLMDCLFAQSRSKEA 252
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
L + GI D + +I+ G ++A ILD M GC+ + Y
Sbjct: 253 VELF--EDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSAL 310
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ +CKE + EA Q+ ++ +GL+LD Y L+ + + A L +M+ +R
Sbjct: 311 MNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRC 370
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+Y I+ GL R E LD+ + V + + I++A C G LE A
Sbjct: 371 RADALTYNVILRGLSSEGRSEEALQMLDQWGCEG-VHLNKGSYRIILNALCCNGELEKAV 429
Query: 530 RTLRRMIFLQFEPNDQTYLSLI 551
+ L M P+ T+ L+
Sbjct: 430 KFLSVMSKRGIWPHHATWNELV 451
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 83/193 (43%), Gaps = 8/193 (4%)
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI-YDLKGSYLTIMTGLMENHRPEL 491
LQ + ++ L++ + D SAF + +M+ + I Y +Y T+M L R +
Sbjct: 192 ALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKE 251
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
++++ + +N +I+ FC++G +E AK L M PN Y +L+
Sbjct: 252 AVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALM 311
Query: 552 NGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
NG+ + ++ E+K+ G+K + + L + G D M+++ +
Sbjct: 312 NGFCKEGKIQEAKQVFDEVKK-------TGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGE 364
Query: 612 SQEMKVFVDKWKY 624
+ + D Y
Sbjct: 365 MKASRCRADALTY 377
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 160/393 (40%), Gaps = 26/393 (6%)
Query: 193 NFVAFLKVFEECCR-IALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKV 243
N V + + E C+ +DE + P++ +A ++G C Q S+A +
Sbjct: 256 NVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQ-FSEAYAL 314
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
M +GV PN ++ L A + + L M G +V Y++L+ K
Sbjct: 315 FREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGK 374
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKE---TYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
G +E A + QSD TY +V + GN+ G ++++ +E
Sbjct: 375 EGKIEEAKDVL-------RHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQ---ME 424
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
++ + II+ V G KA + +M G + + Y + + K
Sbjct: 425 EKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQE 484
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
A + D+ G++ + D+L+ + + + A +LF+DM E + +Y T+M
Sbjct: 485 AALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLM 544
Query: 481 TGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
GL + + AAF + + + + + +N I+ C G+ +AK L+ M
Sbjct: 545 DGLFKTG--NMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTG 602
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
EP+ TY ++I + L + E+KR
Sbjct: 603 LEPDQATYNTMIAARCREGKTSKALKLLKEMKR 635
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 98/507 (19%), Positives = 193/507 (38%), Gaps = 60/507 (11%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL---LD 141
DEA+ ++ + + + P + LS+L D F+ + + K+ +
Sbjct: 274 DEAFSLYEGMVRSGVLPD-------VVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPN 326
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
T TL+ S+ A + + L+ M M ++ + + ++
Sbjct: 327 HVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGK--------I 378
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
EE + D + PN ++ C ++ AE+V+ M V PN +F
Sbjct: 379 EEAKDVLRHAQSDNITPNFVTYTVLVDAHCRA-GNIDGAEQVLLQMEEKSVIPNVVTFSS 437
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+ +G K + M + G + +V Y +LI G+ K E+A L G
Sbjct: 438 IINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEG 497
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
+E ++F ++ +V G +NGN++G L + ++ G+++D ++
Sbjct: 498 -VEANNFVVDS---LVNGLRKNGNIEGAEALF---KDMDERGLLLDHVNYTTLMDGLFKT 550
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
G A + E+ S VY + C + +EA + ++ ++GL+ D Y
Sbjct: 551 GNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATY 610
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV- 500
+ +I A A L ++M+ I +Y T++ GL+E + L+E+
Sbjct: 611 NTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMAS 670
Query: 501 --------------------EDPRVEVKTHD-------------WNSIIHAFCKAGRLED 527
P V ++ H+ +N+++H C G +
Sbjct: 671 AGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARN 730
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGY 554
A L M+ P+ T+ +LI G+
Sbjct: 731 ATVVLDEMLTRGIAPDTITFNALILGH 757
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 8/279 (2%)
Query: 280 SLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKG 339
S M + G S V S+ + G + G + A+ + + G ++ D + ++ G
Sbjct: 139 SEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVG--WNALIDG 196
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF-GIISACVNLGLSDKAHSILDEMNACG 398
+ + V+ +A + +++ G+ +D VG+ +++ + G +D A +++ M A G
Sbjct: 197 YCK---VQDMAAALAVVERMTTQGVALD-VVGYNSLVAGFFHSGDADAALEVVERMKADG 252
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ Y + YCK EA L + SG+ DV AL++ F A+
Sbjct: 253 VEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAY 312
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
+LFR+M + + +Y T++ L + R L E+V V + + +++
Sbjct: 313 ALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRG-VVMDLVMYTALMDR 371
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
K G++E+AK LR PN TY L++ + A
Sbjct: 372 LGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRA 410
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 14/247 (5%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
TY +V G L+ G VK L+ E + P+ + R ++ AC D
Sbjct: 644 TYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQR-----VLQACSGSRRPDVILE 698
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
I + M G + VY + C AT ++ ++ + G+ D ++ALI
Sbjct: 699 IHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHC 758
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR---VE 506
S +AF+++ M + ++ T++ GL R D V+ D + +E
Sbjct: 759 KSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGR----IGEADTVLSDMKKVGLE 814
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
++ ++ + K +A R M+ F P TY SL++ + A +
Sbjct: 815 PNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKEL 874
Query: 567 WHEIKRK 573
+ E+KR+
Sbjct: 875 FSEMKRR 881
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 104/498 (20%), Positives = 204/498 (40%), Gaps = 56/498 (11%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
++ S T L+ ++D+A+ ++ + + P +S+IA L Q + +A
Sbjct: 200 DVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQ---AMDKAM 256
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
V+ + KN + D T +++L ++ A +K M + + +
Sbjct: 257 -EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315
Query: 187 ICRKNSNFVAFLKVFEECCRIALDEN-----------------------LDFM-----KP 218
+C KN K+F+ + L+ + LD M +P
Sbjct: 316 LC-KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQP 374
Query: 219 NIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQEKIV 276
+ + N + C Y Q V A V M G+ PN +G + + G + + ++
Sbjct: 375 DHHVFNILI--CAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
E +++E G + ++ Y+SLI G + A IL L G + F + +
Sbjct: 433 YFEQMIDE-GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF----FNSI 487
Query: 337 VKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+ + G V IE++KL G+ D +I C G D+A +L
Sbjct: 488 IDSHCKEGRV-------IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA 540
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M + G + Y + YC+ R +A L ++ SSG+ ++ Y+ +++ ++
Sbjct: 541 SMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTR 600
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH-RPELMAAFLDEVVEDPRVEVKTHD 511
+A L+ + ++ +Y I+ GL +N+ E + F + + D ++E +T
Sbjct: 601 RTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT-- 658
Query: 512 WNSIIHAFCKAGRLEDAK 529
+N +I A K GR+++AK
Sbjct: 659 FNIMIGALLKCGRMDEAK 676
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 4/178 (2%)
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV---MDISSSGL 434
C + SD +L M GC + Y LK C E+R+ EA +L+ D G
Sbjct: 138 CADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGS 197
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
DV +Y+ ++ D A+S + +M + I +Y +I+ L + +
Sbjct: 198 PPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAME 257
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
L+ +V++ V +NSI+H +C +G+ ++A TL++M EPN TY SL+N
Sbjct: 258 VLNTMVKNG-VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMN 314
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 181/437 (41%), Gaps = 28/437 (6%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D + + LL + + N + A L+ M +R GG D+ N+ F K
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDR-------GGGSPPDVVSYNTVLNGFFKE 214
Query: 201 FE-ECCRIALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
+ + E LD + P++ ++ + C Q++ A +V+ TM GV P+ +
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKA-QAMDKAMEVLNTMVKNGVMPDCMT 273
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ + + Y G ++ + M G +V YSSL++ K G + +R I +
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR-STEARKIFDSM 332
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGII 375
+E D + TY +++G+ G + L +L++ +GI D V +I
Sbjct: 333 TKRGLE-PDIA--TYRTLLQGYATKGALVEMHALLDLMVR------NGIQPDHHVFNILI 383
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
A D+A + +M G + + Y + CK +A + GL
Sbjct: 384 CAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLT 443
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
++ Y +LI T + A L +M + I + +I+ + R
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 503
Query: 496 LDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
D +V R+ VK +N++I C AG++++A + L M+ + +P+ TY +LING
Sbjct: 504 FDLMV---RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 560
Query: 554 YVTAEQYFSVLMMWHEI 570
Y + L ++ E+
Sbjct: 561 YCRVSRMDDALALFKEM 577
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/399 (18%), Positives = 156/399 (39%), Gaps = 55/399 (13%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D ++PN+ ++ + C +S ++A K+ ++M+ G+ P+ +++ L YA KG
Sbjct: 300 DGVEPNVVTYSSLMNYLCKNGRS-TEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALV 358
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
++ L LM G ++ LI Y K ++ A M Q +
Sbjct: 359 EMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF------SKMRQHGLNPNVV 412
Query: 334 C--EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
C V+ ++G+V + ++ +++ G+ + V +I DKA ++
Sbjct: 413 CYGTVIDVLCKSGSVD---DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI 469
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
EM G + + + ++CKE R E+ +L + G++ D+ Y+ LI+ +
Sbjct: 470 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA 529
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
A L M + +P+++
Sbjct: 530 GKMDEATKLLASMVSVGV------------------KPDIVT------------------ 553
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+ ++I+ +C+ R++DA + M+ PN TY ++ G + + ++ I
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
+ G + E + + L+ L K D +++ +
Sbjct: 614 K-------SGTQLELSTYNIILHGLCKNNLTDEALRMFQ 645
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 161/410 (39%), Gaps = 26/410 (6%)
Query: 55 TQQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLS 114
T ++ + + N+ + + ++ + EA K F S+T L P IA
Sbjct: 293 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD-------IATYR 345
Query: 115 SLQDNHNLKRAFASVVYVIE---KNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKN 171
+L + K A + +++ +N D + L+ + A LV +
Sbjct: 346 TLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM-LVFSKMRQ 404
Query: 172 RYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCC 231
P + G ++D+ K+ + + FE+ +DE L PNI + + G C
Sbjct: 405 HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ----MIDEGL---TPNIIVYTSLIHGLC 457
Query: 232 YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQM 291
AE++I M G+ N F + + +G + +L LM G +
Sbjct: 458 T-CDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 516
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLAN 351
+ Y++LI G G ++ A++ + + G + D TY ++ G+ + V + +
Sbjct: 517 ITYNTLIDGCCLAGKMDEATKLLASMVSVG--VKPDIV--TYGTLINGYCR---VSRMDD 569
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
+ +++ SG+ + I+ + + A + + G + L Y L
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 629
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
CK + T EA ++ ++ + LQL+ ++ +I A + A LF
Sbjct: 630 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLF 679
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 161/400 (40%), Gaps = 29/400 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ N+ + C +++ AE + M V PN ++ L Y Y+ G ++
Sbjct: 253 IPPDLVTYNSVVHALCKA-RAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEA 311
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V + M +V S L+ K G ++ A R + + FS Y
Sbjct: 312 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA-RDVFDTMAMKGQNPDVFS---YNI 367
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ G + + +L + GI D +I A N G+ DKA I +EM
Sbjct: 368 MLNGYATKGCLVDMTDLF---DLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 424
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y + A C+ + +A + + G+ D Y+ LI+ T
Sbjct: 425 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 484
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD---- 511
A L ++ ++ + +I+ L + R +M A + + D V V H
Sbjct: 485 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGR--VMDA---QNIFDLTVNVGLHPDAVV 539
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N ++ +C G++E A R M+ EPN Y +L+NGY + L ++ E+
Sbjct: 540 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 599
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
Q+GIK LY+++ G F+A V K
Sbjct: 600 -------QRGIK-----PSTILYSIIIDGLFEAGRTVPAK 627
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/391 (19%), Positives = 148/391 (37%), Gaps = 52/391 (13%)
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
C YG + +A V +TM++ G P+ S+ + YA KG + +L LM G +
Sbjct: 338 CKYG--KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 395
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
++ LI Y G L+ A
Sbjct: 396 DFYTFNVLIKAYANCGMLDKA--------------------------------------- 416
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
+I ++ G+ D +I+A +G D A ++M G + Y
Sbjct: 417 ---MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 473
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ +C +A +L+ +I ++G+ LD+ + ++I A ++F +
Sbjct: 474 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 533
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+ Y +M G + E D +V +E + ++++ +CK GR+++
Sbjct: 534 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS-AGIEPNVVGYGTLVNGYCKIGRIDEGL 592
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
R M+ +P+ Y +I+G A + M +HE+ + GI +
Sbjct: 593 SLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMT-------ESGIAMDICTY 645
Query: 590 DAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
+ L L K FD + + ++ + M V ++
Sbjct: 646 NIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 676
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 94/474 (19%), Positives = 181/474 (38%), Gaps = 39/474 (8%)
Query: 81 TNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLL 140
T EA + FK + +S+ P + L+ L + F ++ + +NP +
Sbjct: 305 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA-MKGQNPDVF 363
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
+ N +A C+ L G D F +K
Sbjct: 364 SY-------------NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDF----YTFNVLIKA 406
Query: 201 FEEC-----CRIALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
+ C I +E D +KP++ + C + + DA + M GV P
Sbjct: 407 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR-IGKMDDAMEKFNQMIDQGVAP 465
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
++ ++ L + G K EL S + G +VF+SS+I+ KLG + A
Sbjct: 466 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 525
Query: 315 LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGF 372
L + G + Y ++ G+ G ++ + + + +EP+ VG+
Sbjct: 526 DLTVNVGLHPDA----VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN------VVGY 575
Query: 373 G-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
G +++ +G D+ S+ EM G +Y + + RT A +++
Sbjct: 576 GTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTE 635
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
SG+ +D+ Y+ ++ ++ F A LF+++R + + T++ G+ + R E
Sbjct: 636 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE- 694
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
A L + R+ ++ +I K G +E+A+ M EPN +
Sbjct: 695 EAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 748
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 147/392 (37%), Gaps = 53/392 (13%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
+N D NI A +GC + D + + M G+ P+ +F L YA G
Sbjct: 358 QNPDVFSYNIMLNGYATKGC------LVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 411
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
+ +K + + + M + G +V Y ++I+ ++G ++ A + G K
Sbjct: 412 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD----K 467
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
Y +++GF +G++ LI E +G+ +D II+ LG A +I
Sbjct: 468 YAYNCLIQGFCTHGSLLKAKELISEIMN---NGMHLDIVFFSSIINNLCKLGRVMDAQNI 524
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
D G VY + YC + +A ++ + S+G++ +V Y L+
Sbjct: 525 FDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCK 584
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR--PELM---------------- 492
SLFR+M + I Y I+ GL E R P M
Sbjct: 585 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICT 644
Query: 493 ----------------AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
A FL + + V++ N++I + R+E+AK +
Sbjct: 645 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS 704
Query: 537 FLQFEPNDQTYLSLINGYVT------AEQYFS 562
+ P+ TY +I + AE FS
Sbjct: 705 RSRLVPSVVTYSIMITNLIKEGLVEEAEDMFS 736
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 4/202 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS- 432
++ C + A + ++ G V + + L+ +C+ RT EA +++ +
Sbjct: 120 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPEL 179
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG--SYLTIMTGLMENHRPE 490
G DV +Y L+++ A L R M E +Y T++ G +
Sbjct: 180 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 239
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
E+V+ + +NS++HA CKA ++ A+ LR+M+ + PN+ TY +L
Sbjct: 240 KACDLFKEMVQRG-IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 298
Query: 551 INGYVTAEQYFSVLMMWHEIKR 572
I GY + Q+ + ++ E++R
Sbjct: 299 IYGYSSTGQWKEAVRVFKEMRR 320
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 180/446 (40%), Gaps = 29/446 (6%)
Query: 141 DFQTVHTLLGSMRNAN--TAAPAFALVKCMFKNRYFMPFE----LWGGFLVDICRKNSNF 194
D + LLG +R + AP F+ + F R +P L + + +++
Sbjct: 215 DAAILERLLGDLRESRLEPDAPLFSDLISAFA-RAALPDAALDLLASAQAIGLTPRSNAV 273
Query: 195 VAFLKVFEECCRIALDENL--DF-----MKPNIYACNAALEGCCYGLQSVSDAEKVIETM 247
A + R+A E L +F +KP A NA L+G + S+ +AE+V++ M
Sbjct: 274 TALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYV-KIGSLKNAEQVLDEM 332
Query: 248 SVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNL 307
S GV P+E+++ L Y G E L M G +S +++G+ G+
Sbjct: 333 SDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDW 392
Query: 308 ESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
+ A + G F Y ++ F G L + + ++ GI D
Sbjct: 393 QKAFAVLREMHASGVQPDRHF----YNVMIDTF---GKYNCLGHAMDAFNRMREEGIEPD 445
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+I A G D+A + +EM C G Y + ++ R ++
Sbjct: 446 VVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLS 505
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
++ GL ++ Y L++ S F+ A M+ LK S T+ L+ +
Sbjct: 506 EMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKAD---GLKPSP-TMYHALVNAY 561
Query: 488 RPELMAAFLDEVVEDPR---VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
+A VV+ R +E T NS+++AF + R+ +A L+ M P+
Sbjct: 562 AQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDV 621
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEI 570
TY +L+ + EQ+ V +++ E+
Sbjct: 622 ITYTTLMKALIRIEQFDKVPVIYEEM 647
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 4/214 (1%)
Query: 362 SGIVVDRSVGF-GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
+G + R+ + ++ V +G A +LDEM+ CG + Y + AY + R
Sbjct: 299 AGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWE 358
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY-LTI 479
A L+ ++ + G++ + ++ D+Q AF++ R+M + + + Y + I
Sbjct: 359 SARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMI 418
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
T N M AF + + +E WN++I A K GR + A M
Sbjct: 419 DTFGKYNCLGHAMDAF--NRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESN 476
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
P TY +IN E++ V M E+K +
Sbjct: 477 CPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQ 510
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 153/363 (42%), Gaps = 25/363 (6%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMS--VLGVRPNESSFGFLAYLYALKGL--QE 273
PN+ + + G C + + +A ++I+ M+ V PN + Y L GL Q
Sbjct: 149 PNVVTYSVLINGLCK-VGRIDEARELIQEMTRKSCDVLPN-----IITYNSFLDGLCKQS 202
Query: 274 KIVELESLM-----NEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
E LM S V +S+LI G K G + A ++ GG +
Sbjct: 203 MTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMI--AGGYVPNV-- 258
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
TY +V G + ++ A+ +IE+ + G+ D ++ A D+A
Sbjct: 259 --VTYNALVNGLCKADKME-RAHAMIES--MVDKGVTPDVITYSVLVDAFCKASRVDEAL 313
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+L M + GC+ + + + CK R+ EA Q+ + + + L D ++ LI +
Sbjct: 314 ELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGA 373
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ +F+ A +LF +M + ++ ++ GL + + E LD ++ + V
Sbjct: 374 CKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILD-LMGNLGVPPN 432
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+N ++H CK+GR+E+ L M+ P TY SL+ A + L +
Sbjct: 433 VVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVS 492
Query: 569 EIK 571
++K
Sbjct: 493 KLK 495
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 127/315 (40%), Gaps = 44/315 (13%)
Query: 189 RKNSNFVAFLKVFEECCRIA-LDE--NLDFMK----PNIYACNAALEGCCYGLQSVSDAE 241
R + + V F + + C+ DE N D + PN+ NA + G C + A
Sbjct: 220 RVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKA-DKMERAH 278
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
+IE+M GV P+ ++ L + ++ +EL M G + +V ++S+I G
Sbjct: 279 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 338
Query: 302 VKLGN--------LESASRTIL-------LCLGG----GNMEQSDFSKE----------- 331
K L+ +R ++ + + G GN EQ+ E
Sbjct: 339 CKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDV 398
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLE-PSGIVVDRSVGFGIISACVNLGLSDKAHS 389
T+ ++ G + G V+ +++ L P +V + G+ + G ++
Sbjct: 399 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKS----GRIEEPCE 454
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
L+EM + GC Y + A C+ RT +A QLV + S G D Y+ L++
Sbjct: 455 FLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLW 514
Query: 450 TSQDFQSAFSLFRDM 464
S + A ++ +M
Sbjct: 515 KSGKTEQAITVLEEM 529
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 438 VGNYDALIEASITSQDFQSAFSLFR-DMREARIYDLKGSYLTIMTGLME-NHRPELMAAF 495
V +Y+ ++++ + + A +FR +M + +Y TI+ GL + N M F
Sbjct: 45 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104
Query: 496 LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+ V +V T +N++I + CKAG LE+A+R M PN TY LING
Sbjct: 105 EELVKRGHHPDVVT--YNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLC 162
Query: 556 TAEQYFSVLMMWHEIKRK 573
+ + E+ RK
Sbjct: 163 KVGRIDEARELIQEMTRK 180
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 150/413 (36%), Gaps = 81/413 (19%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + P I N + G C + ++ E + G P+ ++ L G E
Sbjct: 75 DGVAPTIVTYNTIINGLCKS-NELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLE 133
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
+ L M+ G +V YS LI+G K+G ++ A I + ++++
Sbjct: 134 EARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELI-----------QEMTRKS- 181
Query: 334 CEVVKGFLQ-NGNVKGLANLIIEAQKLEPSGIVVDRS-------VGFG-IISACVNLGLS 384
C+V+ + N + GL + A+ E + D S V F +I G +
Sbjct: 182 CDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQT 241
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAY-------CKEHRTAEATQLVMDISSSGLQLD 437
D+A + D+M A G YVP + Y CK + A ++ + G+ D
Sbjct: 242 DEACN--DDMIA-------GGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPD 292
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
V Y L++A + A L M +G ++T
Sbjct: 293 VITYSVLVDAFCKASRVDEALELLHGMAS------RGCTPNVVT---------------- 330
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+NSII CK+ R +A + ++ P+ T+ LI G A
Sbjct: 331 --------------FNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKA 376
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
+ ++ E+ ++ + Q + L+D L K G +A +++
Sbjct: 377 GNFEQASALFEEM---VAKNMQPDVMTFGALID----GLCKAGQVEAARDILD 422
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 213 LDFM-----KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
LD M PN+ N + G C + + + + +E M G P ++G L Y
Sbjct: 421 LDLMGNLGVPPNVVTYNVLVHGLCKSGR-IEEPCEFLEEMVSSGCVPESMTYGSLVYALC 479
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
+ ++L S + FG+ V Y+ L+ G K G E A + +G G+ S
Sbjct: 480 RASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDS- 538
Query: 328 FSKETYCEVVKGFLQNGNVKGLANL--IIEAQKLEP 361
T+ G ++GN+ G L ++ A+ + P
Sbjct: 539 ---FTFAACFGGLHRSGNLAGTMELLRVVLAKGMLP 571
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 149/379 (39%), Gaps = 45/379 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP+++A NA + G C + A+ V++ M G P+ + + + KG + +
Sbjct: 41 KPDVFAYNAVISGFCKA-NRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLAL 99
Query: 277 EL-ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++ E L+ + ++ Y+ LI Y+ G ++ A + + L G +E F TY
Sbjct: 100 KVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRG-LEPDTF---TYNV 155
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ +G + G V + + L G D ++ A +N G D+ + E+
Sbjct: 156 ITRGLCKEGKVDRAFEFV---RTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIF 212
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ GC + Y + + C++ + E+ LV + GL D YD LI A
Sbjct: 213 SRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLD 272
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMEN----HRPELMAAFLDEVVEDPRV------ 505
A M +Y TIM L +N H E+ LDEV P V
Sbjct: 273 MAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGK-LDEVGCPPNVSSYNTM 331
Query: 506 -------------------------EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
+ +NS+I C+ G +++A L M+ +F
Sbjct: 332 LSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRF 391
Query: 541 EPNDQTYLSLINGYVTAEQ 559
+PN +Y +++ G A +
Sbjct: 392 QPNIVSYKTVLLGLCKAHR 410
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 183/438 (41%), Gaps = 22/438 (5%)
Query: 118 DNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPF 177
++ N+ +A V+ ++EK+ K D + ++ AN A ++ M K + F P
Sbjct: 22 NSRNIDKA-TRVMGILEKHGKP-DVFAYNAVISGFCKANRIESAKTVLDRM-KRKGFSPD 78
Query: 178 ELWGGFLVD-ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQS 236
+ ++ C K +A LKVFEE + D N KP + +E Y L+
Sbjct: 79 VVTHNIMIGTFCGKGKIDLA-LKVFEELLK---DNNC---KPTLITYTILIEA--YILEG 129
Query: 237 -VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+ +A K+++ M G+ P+ ++ + +G ++ E +N G ++ Y+
Sbjct: 130 GIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYN 189
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
L+ + G + + + G + + TY ++ ++G ++ NL+
Sbjct: 190 ILLRALLNQGKWDEGEKWMSEIFSRG----CEPNVVTYSILISSLCRDGKIEESVNLV-- 243
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
+ ++ G+ D +I+A G D A LD M G + Y + A CK
Sbjct: 244 -KVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCK 302
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
A ++ + G +V +Y+ ++ A +S D A + M I +
Sbjct: 303 NGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVIT 362
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
Y ++++ L + + L +++ R + + +++ CKA R++DA L M
Sbjct: 363 YNSLISCLCRDGMVDEAIGLLADMLSG-RFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAM 421
Query: 536 IFLQFEPNDQTYLSLING 553
I +PN+ TY LI G
Sbjct: 422 IENGCQPNETTYTLLIEG 439
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 142/339 (41%), Gaps = 17/339 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++Y + C+ L V A + + LG +P+ ++F L ++G +
Sbjct: 101 IPPDVYTLAIVINSLCH-LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEA 159
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ L M GF +V Y +LI+G K+GN +A R + +MEQ + +
Sbjct: 160 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLL------RSMEQGNCQPNVVVF 213
Query: 334 CEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ ++ V N+ E + + P+ IV S+ G+ C +++
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEMITKGISPN-IVTYNSLIHGLCKLCE----WKHVTTLM 268
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+EM + + A CKE AEA +V + G++ +V Y+AL++
Sbjct: 269 NEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR 328
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ A +F M SY T++ G + + A +L E + + T
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD-KAMYLFEEMSRQELTPNTVT 387
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+N++IH C GRL+DA M+ P+ TY +L
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 426
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 149/400 (37%), Gaps = 51/400 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ + G C + + S A +++ +M +PN F L +
Sbjct: 172 QPNVVTYGTLINGLC-KVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+ S M G S +V Y+SLI G KL + + T++ + + F+ T V
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT-TLMNEMVDSKIMPDVFTLNT---V 286
Query: 337 VKGFLQNGNV---KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
V + G V + +++I + +EP+ + + + + V D A + D
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIH-RGVEPNVVTYNALMDGHCLRNEV-----DVAVKVFDT 340
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M C + Y + YCK +A L ++S L + Y+ LI
Sbjct: 341 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 400
Query: 454 FQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKT 509
Q A SLF +M +I DL +Y T+ L +N + A L + DP +++ T
Sbjct: 401 LQDAISLFHEMVARGQIPDLV-TYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYT 459
Query: 510 H-------------------------------DWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+N +IH CK G L +A + M
Sbjct: 460 TILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKN 519
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTD 577
PND TY + G++ + + + E + R S D
Sbjct: 520 GCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 559
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 153/397 (38%), Gaps = 36/397 (9%)
Query: 57 QQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL 116
+ +Q Q N+ T + EA+ F + + P+ NSLI L L
Sbjct: 199 RSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 258
Query: 117 QDNHNLKRAFASVVYVIEKNPKLL-DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFM 175
+ ++ +V + K++ D T++T++ ++ A A +V M
Sbjct: 259 CEWKHVTTLMNEMV-----DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 313
Query: 176 PFELWGGFLVDICRKNSNFVAFLKVFE-----ECCRIALDENLDFMKPNIYACNAALEGC 230
+ + C +N VA +KVF+ +C N+ + N + G
Sbjct: 314 NVVTYNALMDGHCLRNEVDVA-VKVFDTMVHKDCV------------ANVISYNTLINGY 360
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
C +QSV A + E MS + PN ++ L + G + + L M G
Sbjct: 361 C-KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 419
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
+V Y +L K +L+ A +L + G N D + Y ++ G + G ++
Sbjct: 420 LVTYRTLSDYLCKNRHLDKA-MALLKAIEGSNW---DPDIQIYTTILDGMCRAGELEDAR 475
Query: 351 NLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
+L + ++ L+P+ + +I GL +A + EMN GCS Y
Sbjct: 476 DLFSNLSSKGLQPNVWTYNI-----MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+ + + + +L+ ++ + G +DV L+
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 94/243 (38%), Gaps = 36/243 (14%)
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
K + L+ +++++ GI D +I++ +L D A S L ++ G +
Sbjct: 84 KHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTF 143
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
++ C E + EA L + G Q +V Y LI + +A L R M +
Sbjct: 144 TTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 203
Query: 467 ARIYD-----------------------------LKG------SYLTIMTGLMENHRPEL 491
KG +Y +++ GL + +
Sbjct: 204 GNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKH 263
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+ ++E+V D ++ N+++ A CK G + +A + MI EPN TY +L+
Sbjct: 264 VTTLMNEMV-DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 322
Query: 552 NGY 554
+G+
Sbjct: 323 DGH 325
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 175/411 (42%), Gaps = 35/411 (8%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL--KGLQEK 274
+P+ + N A++ C + +A ++ M G P ++F + + L G
Sbjct: 149 RPDTFTWNKAVQACVVA-GDLDEAVGMLRRMGCDGA-PAPNAFSYNVVIAGLWKAGTDCD 206
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
V+L M E + Y+++I G++K G+LES R L G TY
Sbjct: 207 AVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNV----ITYN 262
Query: 335 EVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ G + G + A ++ E ++K+ P G S+ F S G S S+ +
Sbjct: 263 VLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTY--SILFDGHS---RTGDSQTMLSLFE 317
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
E G +G L CK+ + ++A +++ + +SGL Y+ LI
Sbjct: 318 ESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIG 377
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE------DPRVE 506
D + AFS+F+ M+ I +Y ++ GL + R + D V+E +P VE
Sbjct: 378 DLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVER---ITEAHDLVIEMEKNGVNPSVE 434
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+N++I A+ +AG+LE L M +PN +Y S++N + + + +
Sbjct: 435 T----FNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAI 490
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
++ K D G + + ++DA+ ++ G D + EK + V
Sbjct: 491 LDDMFIK---DVLPGAQVYNAIIDAY----IECGSTDQAFMLAEKMKSSGV 534
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 108/499 (21%), Positives = 193/499 (38%), Gaps = 82/499 (16%)
Query: 88 WKSFKSLTANSLFPSKPVTNSLIAHLS--SLQDNH----NLKRAFASVVYVIEKNPKLLD 141
WK+ A LF P + H++ ++ D H +L+ F ++ K +
Sbjct: 199 WKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKP-N 257
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
T + LL + A A++ M +R +P L D + + L +F
Sbjct: 258 VITYNVLLSGLCRAGRMGETAAVLDEM-ASRKMVPDGFTYSILFDGHSRTGDSQTMLSLF 316
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLG---------- 251
EE + + K Y C+ L G C +S AE+V++T+ G
Sbjct: 317 EESVKKGV-------KIGAYTCSILLNGLCKD-GKISKAEEVLQTLVNSGLLQTTVIYNT 368
Query: 252 -------------------------VRPNESSFGFLAYLYALKGLQ--EKIVELESLMNE 284
+RP+ ++ L + GL E+I E L+ E
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNAL-----INGLGKVERITEAHDLVIE 423
Query: 285 F---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKG 339
G + + +++LI Y + G LE I+L +M++ +Y +V
Sbjct: 424 MEKNGVNPSVETFNTLIDAYGRAGQLEKC--FIIL----SDMQEKGLKPNVVSYGSIVNA 477
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF----GIISACVNLGLSDKAHSILDEMN 395
F +NG I+EA + + D G II A + G +D+A + ++M
Sbjct: 478 FCKNGK-------ILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMK 530
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ G + Y +K CK+ + +EA +L+ + + GL DV +Y+ LI A +
Sbjct: 531 SSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTD 590
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A L ++M + I +Y + + L R M +++ D V + +N +
Sbjct: 591 RALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQML-DKDVVPCSGIYNIM 649
Query: 516 IHAFCKAGRLEDAKRTLRR 534
+ A+ K G E LR+
Sbjct: 650 VDAYAKCGE-ESKVEALRK 667
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 142/349 (40%), Gaps = 54/349 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KPN+ N L G C + + + V++ M+ + P+ ++ L ++ G + +
Sbjct: 254 LKPNVITYNVLLSGLCRAGR-MGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTM 312
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ L + G S L++G K G + A + + G ++ + Y
Sbjct: 313 LSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVI----YNT 368
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G+ Q G+++G ++ ++++ + P I + A +N
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYN---------ALIN------------- 406
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
GLG K R EA LV+++ +G+ V ++ LI+A +
Sbjct: 407 --------GLG----------KVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQ 448
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV-VED--PRVEVKTH 510
+ F + DM+E + SY +I+ +N + A LD++ ++D P +V
Sbjct: 449 LEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQV--- 505
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+N+II A+ + G + A +M P+ TY LI G Q
Sbjct: 506 -YNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQ 553
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 139/309 (44%), Gaps = 42/309 (13%)
Query: 254 PNESSFGFLAYL--YALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
P S + A L YA GL E+ + L M G V ++++IS Y+++G+L+SA
Sbjct: 132 PERSVVSWNAMLSGYAQNGLAEEALRLFDEM--LGAYRNSVTWNAMISAYMRVGDLDSA- 188
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL---IIEAQKLEPSGIVVDR 368
R + + G N+ T+ ++ G+ QNG L +I A+KL P D
Sbjct: 189 RKLFNTMPGRNVV-------TWNSMIAGYAQNGQSAMAIELFKEMITAKKLTP-----DE 236
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+ISAC +LG + + ++ + + + + + Y + +A ++ +
Sbjct: 237 VTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQE 296
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT-----GL 483
+++ DV +Y+ LI A +L M+E I + +++ ++T GL
Sbjct: 297 MATR----DVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGL 352
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+E R E ++DP ++ + ++ + G LEDAKRT+ RM EP+
Sbjct: 353 LEEGRKVF------ESIKDPAID----HYACMVDLLGRVGELEDAKRTMERM---PMEPH 399
Query: 544 DQTYLSLIN 552
Y SL+N
Sbjct: 400 AGVYGSLLN 408
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 8/285 (2%)
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
K L K VE+ M EFG +V Y++L+ Y K G ++ L L
Sbjct: 212 KDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQG----LDLLSEMQRRGCAP 267
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
+ TY ++ G + G + LI E K +G+ V +I N G+ +A
Sbjct: 268 NDVTYNVLINGLSKKGEFEQAKGLIGEMLK---TGLKVSAYTYNPLIYGYFNKGMLAEAL 324
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
S+ +EM G S + Y + CK R ++A Q + D+ ++ L DV +Y+ LI
Sbjct: 325 SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGY 384
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
+ AF LF ++R ++ +Y T++ GL E+ E++ + +
Sbjct: 385 CRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG-IAPD 443
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ +++ CK G L A+ M+ E + Y + I G
Sbjct: 444 IVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG 488
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 143/339 (42%), Gaps = 17/339 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA-LKGLQEKIV 276
P + N+ + G C L +SDA + + M + P+ S+ L Y Y L L + +
Sbjct: 337 PTVATYNSFIYGLC-KLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 395
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+ L + + F + +V Y++L+ G + G LE A + + + G TY +
Sbjct: 396 LFDELRSIYLFPT-IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDI----VTYTIL 450
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V G + G++ E + G+ +D I + LG + +A S+ +EM A
Sbjct: 451 VNGSCKMGSLSMAQEFFDE---MLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLA 507
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G L +Y + CK EA++L+ + S G+ D Y ++I A + + +
Sbjct: 508 KGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRK 567
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWN 513
+F +M + +Y ++ G R E + E+ E P V +N
Sbjct: 568 GREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT----YN 623
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
S+I+ CK R++ A M+ PN +Y LIN
Sbjct: 624 SLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 156/394 (39%), Gaps = 19/394 (4%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A+ +I M G++ + ++ L Y Y KG+ + + L+ M G S + Y+S I
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
G KLG + A + + +M ++ + +Y ++ G+ + GN+ L E +
Sbjct: 348 GLCKLGRMSDAMQQL------SDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR 401
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ +V + ++ G + A + EM G + + Y + CK
Sbjct: 402 SIYLFPTIVTYNT---LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMG 458
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+ A + ++ GL+LD Y I + D AFSL +M Y
Sbjct: 459 SLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYN 518
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++ GL + E + L ++V D + + SIIHA + GRL + M+
Sbjct: 519 VVVDGLCKLGNLEEASELLQKMVSDGVIPDYV-TYTSIIHAHLENGRLRKGREIFYEMLS 577
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALV 597
P+ TY LI+G+ + + + E++ +KGI ++ + L
Sbjct: 578 KGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ-------EKGILPNVITYNSLINGLC 630
Query: 598 KGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMEN 631
K D + E +F +K+ Y EN
Sbjct: 631 KVRRMDQAYNFFAEMVEKGIFPNKYSYTILINEN 664
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 136/320 (42%), Gaps = 14/320 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+++A K++E M G+ P+ ++ + +G+ E+ EL + + G ++ Y+
Sbjct: 223 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNI 282
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK---GLANLI 353
L+ ++ G + + + G + +K TY ++ + G + + ++
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRG----CEPNKVTYSILISSLCRFGRIDEAISVLKVM 338
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
IE ++L P D +ISA G D A I+D M + GC + Y L A
Sbjct: 339 IE-KELTPDTYSYD-----PLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 392
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK +A ++ + G +V +Y+ +I A + D A + M + +
Sbjct: 393 CKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDE 452
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y ++++ L + E LD+ +E +N ++ CK R++DA
Sbjct: 453 ITYNSLISCLCRDGLVEEAIGLLDD-MEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFA 511
Query: 534 RMIFLQFEPNDQTYLSLING 553
MI PN+ TY+ LI G
Sbjct: 512 EMIEKGCRPNETTYILLIEG 531
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 18/248 (7%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLAN 351
Y+++ISG+ K+ +E+A++ + M+ F + TY ++ G L N GLA
Sbjct: 140 YNAVISGFCKVNRIEAATQVL------NRMKARGFLPDIVTY-NIMIGSLCNRRKLGLAL 192
Query: 352 LIIEAQKLE---PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
+++ L+ P+ V+ ++ +I A + G ++A +L+EM A G + Y
Sbjct: 193 KVLDQLLLDNCMPT--VITYTI---LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 247
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
++ CKE A +L+ ++S G + DV +Y+ L+ A + + L +M
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
K +Y +++ L R + + L ++E + T+ ++ +I A CK GRL+ A
Sbjct: 308 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEK-ELTPDTYSYDPLISALCKEGRLDLA 366
Query: 529 KRTLRRMI 536
+ MI
Sbjct: 367 IGIMDYMI 374
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 149/362 (41%), Gaps = 21/362 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I N + C + + A KV++ + + P ++ L ++G + ++
Sbjct: 170 PDIVTYNIMIGSLC-NRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK 228
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M G M Y+++I G K G +E A+ I G + D +Y ++
Sbjct: 229 LLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGC--KPDVI--SYNILL 284
Query: 338 KGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+ FL G L+ E ++ EP+ + +IS+ G D+A S+L M
Sbjct: 285 RAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI-----LISSLCRFGRIDEAISVLKVMI 339
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ Y P + A CKE R A ++ + S+G D+ NY+ ++ A + +
Sbjct: 340 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 399
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLM----ENHRPELMAAFLDEVVEDPRVEVKTHD 511
A +F +R SY T+++ L + ++ A + + V+ +
Sbjct: 400 QALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEIT----- 454
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+NS+I C+ G +E+A L M F P +Y ++ G + + M+ E+
Sbjct: 455 YNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMI 514
Query: 572 RK 573
K
Sbjct: 515 EK 516
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 9/246 (3%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+ EK++ M G PN+ ++ L G ++ + + +M E + Y LI
Sbjct: 295 EGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLI 354
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA-Q 357
S K G L+ A + + G + Y ++ +NGN AN +E
Sbjct: 355 SALCKEGRLDLAIGIMDYMISNGCLPDI----VNYNTILAALCKNGN----ANQALEIFN 406
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
KL G + S +ISA + G +A ++ M + G Y + C++
Sbjct: 407 KLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDG 466
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
EA L+ D+ SG + V +Y+ ++ + A +F +M E + +Y+
Sbjct: 467 LVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYI 526
Query: 478 TIMTGL 483
++ G+
Sbjct: 527 LLIEGI 532
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 165/413 (39%), Gaps = 42/413 (10%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
K F+E RI + KP++ ++ C +SDA+ V M +P+ +
Sbjct: 369 KRFDEAYRILAKMENEGCKPDVITHTVLIQVLC-DAGRISDAKDVFWKMKKSDQKPDRVT 427
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ L + G + ++E+ + M G++ +V Y+++I ++G + A
Sbjct: 428 YITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF---- 483
Query: 319 GGGNMEQSDFSKE--TYCEVVKGFLQ---------------------NG-------NVKG 348
M+Q E +Y ++ GFL+ NG N G
Sbjct: 484 --DEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYG 541
Query: 349 LANLIIEA----QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
+ I+A + ++ GIV D G ++ G A + E+ A G S
Sbjct: 542 KSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 601
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y +K K + EA ++ D+ + DV ++LI+ + A+ +F +
Sbjct: 602 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL 661
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
+E + G+Y T++ GL + + + L+E+ +N+I+ CK G
Sbjct: 662 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS-NYPPNLITYNTILDCLCKNGA 720
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTD 577
+ DA L M P+ +Y ++I G V E+Y ++ ++K+ + D
Sbjct: 721 VNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 773
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 126/317 (39%), Gaps = 47/317 (14%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AE + M LG P+E ++ L E++++++ M+ G+ S V Y+++IS
Sbjct: 899 AEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIIS 958
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
G VK LE A N+ FS TY ++ G L+ G +
Sbjct: 959 GLVKSRRLEQAIDLYY------NLMSQGFSPTPCTYGPLLDGLLKAGRI----------- 1001
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ A ++ +EM GC +Y L +
Sbjct: 1002 ---------------------------EDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 1034
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
T + L D+ G+ D+ +Y +I+ + + FR + E + +Y
Sbjct: 1035 NTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYN 1094
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++ GL ++ R E + +E ++ + + +NS+I KAG+ +A + ++
Sbjct: 1095 LLIDGLGKSKRLEEAVSLFNE-MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLT 1153
Query: 538 LQFEPNDQTYLSLINGY 554
++PN TY +LI GY
Sbjct: 1154 KGWKPNVFTYNALIRGY 1170
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 162/406 (39%), Gaps = 22/406 (5%)
Query: 222 ACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELES 280
+CN LE G V D +V + M V+ N +F L GL+ V L
Sbjct: 217 SCNYMLE-LMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVAL-P 274
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
+M E G Y+ L+ VK G A + + G + S TY ++ F
Sbjct: 275 VMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVP----SVRTYSVLMVAF 330
Query: 341 LQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
+ +V+ + L+ +EA ++P+ V ++ ++ D+A+ IL +M G
Sbjct: 331 GKRRDVETVLWLLREMEAHGVKPN--VYSYTICIRVLGQAKRF---DEAYRILAKMENEG 385
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
C + + ++ C R ++A + + S + D Y L++ + D QS
Sbjct: 386 CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVM 445
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
++ M+ D +Y ++ L + R DE+ + V + + +NS+I
Sbjct: 446 EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVP-EQYSYNSLISG 504
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
F KA R DA + M +PN T++ IN Y + + + + +K
Sbjct: 505 FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK------- 557
Query: 579 QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KGI + +A L+ L K G +V + + M V D Y
Sbjct: 558 SKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITY 603
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 140/340 (41%), Gaps = 44/340 (12%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N L+ C +V+DA ++ +M+ G P+ SS+ + Y +V+
Sbjct: 703 PNLITYNTILDCLCKN-GAVNDALDMLYSMTTKGCIPDLSSYNTVIY---------GLVK 752
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
E F QM + +L+ D++ T C ++
Sbjct: 753 EERYNEAFSIFCQM--------------------KKVLI---------PDYA--TLCTIL 781
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
F++ G +K A II+ L+P G DRS ++ + +K+ + + +
Sbjct: 782 PSFVKIGLMKE-ALHIIKDYFLQP-GSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASS 839
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G ++ P +K CK+ + EA +LV S G+ L G Y++LI + A
Sbjct: 840 GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIA 899
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
LF +M+E + +Y ++ + ++ R E M +E + E +N+II
Sbjct: 900 EGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE-MHRKGYESTYVTYNTIIS 958
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
K+ RLE A ++ F P TY L++G + A
Sbjct: 959 GLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 998
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 97/251 (38%), Gaps = 34/251 (13%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+K + G+ + + +I V+ L D A + EM GC Y L A K
Sbjct: 869 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 928
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R E ++ ++ G + Y+ +I + S+ + A L+ ++ +Y
Sbjct: 929 MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 988
Query: 477 LTIMTGLMENHRPELMAAFLDEVVE----------------------------------D 502
++ GL++ R E +E++E D
Sbjct: 989 GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 1048
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+ + II CKAG+L D R+++ + EP+ TY LI+G +++
Sbjct: 1049 QGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 1108
Query: 563 VLMMWHEIKRK 573
+ +++E+++K
Sbjct: 1109 AVSLFNEMQKK 1119
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 169/437 (38%), Gaps = 25/437 (5%)
Query: 124 RAFASVVYVIEK----NPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFEL 179
R F +V +IE+ NP L+ Q L+ +A A ++ M N P E
Sbjct: 144 RQFGAVWALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVQVLDEM-PNYGCEPDEY 202
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFM-KPNIYACNAALEGCCYGLQSVS 238
G L+D RKN + +FEE L + KP++ + L G C +
Sbjct: 203 VFGCLLDALRKNGSVKEAASLFEE---------LRYRWKPSVKHFTSLLYGWCKE-GKLM 252
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+A+ V+ M G+ P+ + L YA +L M G Y+ LI
Sbjct: 253 EAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNATSYTVLI 312
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
K LE A+R + G Q+D TY ++ GF + G +K L+ E
Sbjct: 313 QSLCKHERLEEATRVFVEMQRNGC--QADLV--TYSTLISGFCKWGKIKRGYELLDE--- 365
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+ G ++ + I+ A ++ +++EM GC+ L +Y ++ CK
Sbjct: 366 MIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGE 425
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK--GSY 476
E +L ++ SSGL + + +I + A F++M ++ G+
Sbjct: 426 VKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFAAPQYGTL 485
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+M L+ + E+ + + ++ W IHA G +++A M+
Sbjct: 486 KELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIWIHALFSKGHVKEACSFCIAMM 545
Query: 537 FLQFEPNDQTYLSLING 553
P T+ L+ G
Sbjct: 546 DKDLMPQPDTFAKLMRG 562
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 133/343 (38%), Gaps = 66/343 (19%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNE--FGFSSQMVFY 294
V A +V++ M G P+E FG L L AL+ + E SL E + + + +
Sbjct: 182 VHKAVQVLDEMPNYGCEPDEYVFGCL--LDALRK-NGSVKEAASLFEELRYRWKPSVKHF 238
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLII 354
+SL+ G+ K G L A ++ G
Sbjct: 239 TSLLYGWCKEGKLMEAKHVLVQMKDAG--------------------------------- 265
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDK---AHSILDEMNACGCSVGLGVYVPTLK 411
+EP +V + +G +DK A+ +L EM GC Y ++
Sbjct: 266 ----IEPDIVVYNNLLG--------GYAQADKMGDAYDLLKEMRRKGCEPNATSYTVLIQ 313
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
+ CK R EAT++ +++ +G Q D+ Y LI + + L +M + +
Sbjct: 314 SLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFP 373
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDA 528
+ Y IM + E ++E+ + P + + +N++I CK G +++
Sbjct: 374 NQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSI----YNTVIRLACKLGEVKEG 429
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGY------VTAEQYFSVLM 565
R M P+ T++ +ING+ V A +YF ++
Sbjct: 430 VRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMV 472
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 81/209 (38%), Gaps = 48/209 (22%)
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
V+ R FG + A + + H I + V+V ++ + +A Q
Sbjct: 139 VLSRMRQFGAVWALIEEMRQENPHLITPQ-----------VFVILMRRFASARMVHKAVQ 187
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
++ ++ + G + D + L++A + + A SLF ++R Y K S
Sbjct: 188 VLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELR----YRWKPS--------- 234
Query: 485 ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
+ S+++ +CK G+L +AK L +M EP+
Sbjct: 235 ------------------------VKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDI 270
Query: 545 QTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
Y +L+ GY A++ + E++RK
Sbjct: 271 VVYNNLLGGYAQADKMGDAYDLLKEMRRK 299
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 141/349 (40%), Gaps = 29/349 (8%)
Query: 218 PNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P++ A N +E YG A K+ + M G P+ +F L Y G +++
Sbjct: 248 PDVVAYNILIE--AYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVR 305
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L + M E G + Y++LI + + G + + L GG + D S TY
Sbjct: 306 LLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGG--VEPDMS--TYA-- 359
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF-GIISACVNLGLSDKAHSILDEMN 395
G L + GL + + V + GF G+I+A N L +A + M
Sbjct: 360 --GLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMK 417
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC L Y + A+ EA + + G+ DV Y++LIEA F
Sbjct: 418 ESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFD 477
Query: 456 SAFSLFRDMREARIYDLKGSYLTIM-----TGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
A RDM EAR + +Y +M GL + E A FLD V E+ +
Sbjct: 478 DAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFD----EAKAQFLDLQVGG---ELPSV 530
Query: 511 DWNSIIHAFC-KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
D ++ + C + R +DA + L M+ EPN + ++ G + E
Sbjct: 531 DSYCLLLSVCARRNRWDDASKVLEEML----EPNMPSIYGVVGGILKGE 575
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 95/467 (20%), Positives = 184/467 (39%), Gaps = 26/467 (5%)
Query: 161 AFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNI 220
A L K M ++++ P E ++ I + ++FE D L+ ++ N+
Sbjct: 57 ALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFE-------DMPLNDVEWNV 109
Query: 221 YACNAALEGCCYGLQSVSDAE-KVIETMSVLGVRPNESSFGFLAYLYALKGLQ-EKIVEL 278
Y+ A + YG +A ++ M V PN ++ + A GL+ E ++ L
Sbjct: 110 YSFTALIN--AYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGL 167
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
+ M G ++ Y++L+S G +E A G + S TY +V
Sbjct: 168 FAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSI----TYNALVD 223
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
+ Q +G+ L+ E ++ + VV ++ +I A G A + +M G
Sbjct: 224 IYGQADRHEGVGELLREMEQAGNAPDVVAYNI---LIEAYGRAGKYRAAAKMFKQMQEAG 280
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
C+ + + L+AY K E L D+ G + DV Y+ LI+ FQ +
Sbjct: 281 CTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESI 340
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
+LF D+ + + +Y ++ + + +++ V T + +I A
Sbjct: 341 NLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQS-YVTPTTDGFTGLITA 399
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
+ A +A M +P+ +TY +LI + Y E T
Sbjct: 400 YGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYC-------EAGSAYLTMI 452
Query: 579 QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYK 625
+GI + + ++ + A +GG FD ++ +E + ++ Y+
Sbjct: 453 DEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYE 499
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 158/370 (42%), Gaps = 17/370 (4%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
++ETM G+ ++ +F + YA ++ VE M+ FG +++ Y+ LI
Sbjct: 187 LVETMRCRGLL-SKDTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLS 245
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
K ++ A + I + D +TY +++G+ G+ K L + Q++ +
Sbjct: 246 KSKQVKKA-QAIYKEMKRKGKFVPDL--KTYTVLMEGW---GHEKDLLMVKTMYQEMIDA 299
Query: 363 GIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
GI D V +G +ISA G D+A + EM A GC VY + E R E
Sbjct: 300 GIRPD-VVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDE 358
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A + SG ++V +A++ A + F+ AF + +MRE +I +Y I+
Sbjct: 359 ALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILH 418
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
L+++ + E + D E + + + ++ FC GR++ A ++M
Sbjct: 419 YLIKSQKFEEAYNVFQRMGMDG-CEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERGVL 477
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
P + +LING + + + E+ KGI+ L ALV+GG
Sbjct: 478 PCMHMFSALINGLCFENRLEEACVYFQEML-------DKGIRPPGQLFSNLKEALVEGGR 530
Query: 602 FDAVMQVVEK 611
++ K
Sbjct: 531 ISLAQEMASK 540
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 142/339 (41%), Gaps = 17/339 (5%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++Y + C+ L V A + + LG +P+ ++F L ++G +
Sbjct: 101 IPPDVYTLAIVINSLCH-LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEA 159
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ L M GF +V Y +LI+G K+GN +A R + +MEQ + +
Sbjct: 160 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLL------RSMEQGNCQPNVVVF 213
Query: 334 CEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
++ ++ V N+ E + + P+ IV S+ G+ C +++
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEMITKGISPN-IVTYNSLIHGLCKLCE----WKHVTTLM 268
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+EM + + A CKE AEA +V + G++ +V Y+AL++
Sbjct: 269 NEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR 328
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ A +F M SY T++ G + + A +L E + + T
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD-KAMYLFEEMSRQELTPNTVT 387
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+N++IH C GRL+DA M+ P+ TY +L
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 426
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 149/400 (37%), Gaps = 51/400 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ + G C + + S A +++ +M +PN F L +
Sbjct: 172 QPNVVTYGTLINGLC-KVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+ S M G S +V Y+SLI G KL + + T++ + + F+ T V
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT-TLMNEMVDSKIMPDVFTLNT---V 286
Query: 337 VKGFLQNGNV---KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
V + G V + +++I + +EP+ + + + + V D A + D
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIH-RGVEPNVVTYNALMDGHCLRNEV-----DVAVKVFDT 340
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M C + Y + YCK +A L ++S L + Y+ LI
Sbjct: 341 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 400
Query: 454 FQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKT 509
Q A SLF +M +I DL +Y T+ L +N + A L + DP +++ T
Sbjct: 401 LQDAISLFHEMVARGQIPDLV-TYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYT 459
Query: 510 H-------------------------------DWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
+N +IH CK G L +A + M
Sbjct: 460 TILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKN 519
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTD 577
PND TY + G++ + + + E + R S D
Sbjct: 520 GCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 559
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 153/397 (38%), Gaps = 36/397 (9%)
Query: 57 QQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL 116
+ +Q Q N+ T + EA+ F + + P+ NSLI L L
Sbjct: 199 RSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 258
Query: 117 QDNHNLKRAFASVVYVIEKNPKLL-DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFM 175
+ ++ +V + K++ D T++T++ ++ A A +V M
Sbjct: 259 CEWKHVTTLMNEMV-----DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 313
Query: 176 PFELWGGFLVDICRKNSNFVAFLKVFE-----ECCRIALDENLDFMKPNIYACNAALEGC 230
+ + C +N VA +KVF+ +C N+ + N + G
Sbjct: 314 NVVTYNALMDGHCLRNEVDVA-VKVFDTMVHKDCV------------ANVISYNTLINGY 360
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
C +QSV A + E MS + PN ++ L + G + + L M G
Sbjct: 361 C-KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 419
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
+V Y +L K +L+ A +L + G N D + Y ++ G + G ++
Sbjct: 420 LVTYRTLSDYLCKNRHLDKA-MALLKAIEGSNW---DPDIQIYTTILDGMCRAGELEDAR 475
Query: 351 NLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
+L + ++ L+P+ + +I GL +A + EMN GCS Y
Sbjct: 476 DLFSNLSSKGLQPNVWTYNI-----MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+ + + + +L+ ++ + G +DV L+
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 94/243 (38%), Gaps = 36/243 (14%)
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
K + L+ +++++ GI D +I++ +L D A S L ++ G +
Sbjct: 84 KHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTF 143
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
++ C E + EA L + G Q +V Y LI + +A L R M +
Sbjct: 144 TTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 203
Query: 467 ARIYD-----------------------------LKG------SYLTIMTGLMENHRPEL 491
KG +Y +++ GL + +
Sbjct: 204 GNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKH 263
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+ ++E+V D ++ N+++ A CK G + +A + MI EPN TY +L+
Sbjct: 264 VTTLMNEMV-DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 322
Query: 552 NGY 554
+G+
Sbjct: 323 DGH 325
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 157/363 (43%), Gaps = 49/363 (13%)
Query: 198 LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNES 257
L++F+E ++ + I AC++ + C A ++ T+ ++ N
Sbjct: 245 LRLFDEMVNAGIEPDETTWVTVISACSSRGDPCL--------AASLVRTLHQKQIQLNCF 296
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
L +YA G I + +E G V ++++IS Y ++GNL+SA R +
Sbjct: 297 VRTALLDMYAKCG---SIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSA-RELFNT 352
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL---IIEAQKLEPSGIVVDRSVGFGI 374
+ G N+ T+ ++ G+ QNG L +I A+KL P D +
Sbjct: 353 MPGRNV-------VTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTP-----DEVTMVSV 400
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
ISAC +LG + + ++ + + + + + Y + +A ++ ++++
Sbjct: 401 ISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR-- 458
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT-----GLMENHRP 489
DV +Y+ LI A +L M+E I + +++ ++T GL+E R
Sbjct: 459 --DVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRK 516
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
E ++DP ++ + ++ + G LEDAKRT+ RM EP+ Y S
Sbjct: 517 VF------ESIKDPAID----HYACMVDLLGRVGELEDAKRTMERM---PMEPHAGVYGS 563
Query: 550 LIN 552
L+N
Sbjct: 564 LLN 566
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 148/361 (40%), Gaps = 30/361 (8%)
Query: 221 YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
Y A + C +++ A ++ M GV+ + + L Y ++ VE+++
Sbjct: 199 YVYTAGIRAYCES-RNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKN 257
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLGG-----------GNMEQSD 327
+M G ++ V Y +L+ G+ ++ LE A R ++ LG + + +
Sbjct: 258 VMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKE 317
Query: 328 FSKETYCEVVK----GFLQNG-NVKGLANLIIEAQKLEPSGIVVDRSVGFGI-------- 374
+E + K G + N L + + + ++ + + + G G+
Sbjct: 318 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377
Query: 375 --ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
I A G+ + A + D+M G V + Y + YCK+ A L+ +
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GL +Y LI + D S L R+M E I ++ ++ G ++ + +
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
A D+++ D V +N +I +C G + A + +M+ + +P++ TY SLI+
Sbjct: 498 ARLFDKMI-DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 556
Query: 553 G 553
G
Sbjct: 557 G 557
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 103/276 (37%), Gaps = 41/276 (14%)
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
SGI V++ I+ + V + A + D+M G + VY ++AYC+
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A LV+ + S G++ Y+ L+ + Q A + M + + +Y T++
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276
Query: 482 GLMENHRPELM-------------------AAFLDEVVEDPRVE------VKTHD----- 511
G E+ + +DE+ + VE K D
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336
Query: 512 ----WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N++I CK R +DA R + M EPN+ TY LI+ L ++
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFD 603
+++ KGIK ++ + K G D
Sbjct: 397 DKMR-------DKGIKVTVYPYNSLINGYCKQGSLD 425
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 137/371 (36%), Gaps = 42/371 (11%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N Y A + G C + + +A ++ + M V PNE +F + Y L G K +L
Sbjct: 477 NNYTFTALINGFCKD-KKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE------- 331
M E G Y SLISG LCL G + ++F +
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISG---------------LCLTSGVSKANEFVADLENSYAV 580
Query: 332 ----TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
+ ++ GF + G +L E + G+ +D I+ A + +K+
Sbjct: 581 LNNFSLTALLYGFFREGRFTETYHLWDE---MAVRGVKLDLVSFTIIVYAALKQHDKEKS 637
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ EM G Y + A KE +A + G + + LI
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINN 697
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT-----GLMENHRPELMAAFLDEVVED 502
S SA L ++M + K +Y + G ME + +L +A L +
Sbjct: 698 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAK-DLHSAMLQGHL-- 754
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+N +I CKAG++++A + ++ F P+ +Y ++I+
Sbjct: 755 ----ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINK 810
Query: 563 VLMMWHEIKRK 573
+W+E+ K
Sbjct: 811 AFELWNEMLYK 821
>gi|255661000|gb|ACU25669.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 376
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 10/254 (3%)
Query: 323 MEQSDFSKE--TYCEVVKGFLQNGNV-KGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
M++SDF ++ TY +V GF +NG + K L L + QK G V+D +I+
Sbjct: 85 MKKSDFVEDSITYGILVHGFCKNGXINKSLHVLEMAEQK----GGVLDAFAYSAMINGLC 140
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
DKA S+L++M GC VY + + +A ++ ++ + +
Sbjct: 141 KEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVHCSPTII 200
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y+ LI ++ F A+ L ++M E + +Y +M GL +H+ E ++V
Sbjct: 201 TYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQV 260
Query: 500 VEDP-RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+ + +V+ H N +IH C G+ + A M + PN T+ +L+ G+
Sbjct: 261 ISKGFKPDVQMH--NILIHGLCSVGKTQRALSLYFXMNRWKCAPNLVTHNTLMEGFYKDG 318
Query: 559 QYFSVLMMWHEIKR 572
+ L++W + R
Sbjct: 319 DIRNALVIWARVLR 332
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 59/319 (18%), Positives = 121/319 (37%), Gaps = 14/319 (4%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNES------SFGFLAYLYALKGLQEKIVELESLMNEFGF 287
++ + D KV E +S+ + ++G L + + G K + + + + G
Sbjct: 66 MRGLFDXGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLEMAEQKGG 125
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK 347
YS++I+G K NL+ A + + G + Y ++ G + +
Sbjct: 126 VLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNA----HVYNTLINGLVGASKFE 181
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
+ E + S ++ + +I+ + +A+ ++ EM G + + Y
Sbjct: 182 DAIRVFREMGTVHCSPTIITYNT---LINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYS 238
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+K C +H+ A QL + S G + DV ++ LI + Q A SL+ M
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFXMNRW 298
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+ ++ T+M G ++ V+ + +E +N + C R+ D
Sbjct: 299 KCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNG-LEPDIISYNITLKGLCSCNRICD 357
Query: 528 AKRTLRRMIFLQFEPNDQT 546
A L + + P T
Sbjct: 358 AILFLHDSVRKKIVPTKIT 376
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 162/411 (39%), Gaps = 57/411 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+I N+ L G C+G +SDA +++ M +G +P+ +F L + L + V
Sbjct: 145 EPDIVTLNSLLNGFCHG-NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L M + G +V TY V
Sbjct: 204 ALIDRMVQRGCQPDLV---------------------------------------TYGAV 224
Query: 337 VKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
V G + G+ NL+ +EA K+E + ++ +I + D A ++ EM
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST-----VIDSLCKYRHEDDALNLFTEM 279
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + Y + C R ++A++L+ D+ + ++ + ALI+A +
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV-EDPRVEVKTHDWN 513
A L+ +M + I +Y +++ G R L+ ++ +D V T +N
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT--YN 397
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++I+ FCKA R++ R M N TY +LI+G+ A + M++ K+
Sbjct: 398 TLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF---KQM 454
Query: 574 ISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+S I + L+D L K G M V E Q + D + Y
Sbjct: 455 VSVGVHPNILTYNILLD----GLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 145/335 (43%), Gaps = 20/335 (5%)
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
E M +LG+ N ++ L + + L M + G+ +V +SL++G+
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKG-FLQNGNVKGLANLIIEAQKLEP 361
+ A + M + + +T + ++ G FL N + +A + ++
Sbjct: 162 NRISDAVALV------DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI----DRMVQ 211
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
G D +++ G +D A ++L++M A + +Y + + CK +
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 271
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A L ++ + G++ +V Y +LI + A L DM E +I ++ ++
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 482 GLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ + +E+++ DP + ++S+I+ FC RL +AK+ L MI
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNI----FTYSSLINGFCMLDRLGEAKQMLELMIRK 387
Query: 539 QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
PN TY +LING+ A++ + ++ E+ ++
Sbjct: 388 DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR 422
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 158/366 (43%), Gaps = 15/366 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN+ ++G C Q V AE V + M GV+P+ ++ L + Y G +++
Sbjct: 234 IQPNVVTYTTVIDGLCKA-QVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEV 292
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V + M+ G Y SL++ G A R + + ++ + Y
Sbjct: 293 VRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA-RFLFDSMIRKGIKPN---VAIYGI 348
Query: 336 VVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ G+ G + L NL++E +G+ D + I +A + D+A I +
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVE------NGLSPDHHIFNIIFTAYAKKAMIDEAMHIFN 402
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M G S + Y + A CK R +A + + G+ ++ +++L+ T
Sbjct: 403 KMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVD 462
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
++ A + +M I + TI+ L + + A L +++E +
Sbjct: 463 KWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV-MKAQRLIDLMERVGTRPGVISY 521
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
++I C GR+++A ++L M+ + +P++ TY +L++GY A + ++ E+ R
Sbjct: 522 TTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLR 581
Query: 573 KISTDG 578
T G
Sbjct: 582 NGITPG 587
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 149/363 (41%), Gaps = 50/363 (13%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
++E R+ + + +KP+ Y + L C +A + ++M G++PN + +G
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN-GRCREARFLFDSMIRKGIKPNVAIYG 347
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L + YA KG ++ +L +LM E G S ++ + + Y K ++ A
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI------- 400
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACV 379
F+K ++ Q L P V +G +I A
Sbjct: 401 -------FNK-----------------------MKQQGLSPD------VVNYGALIDALC 424
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
LG D A ++M G + + V+ + C + +A + ++ + G++ DV
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVV 484
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
++ ++ T A L M SY T++ G R + A LD +
Sbjct: 485 FFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVM 544
Query: 500 VEDPRVEVKTHDW--NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ V +K +W N+++H +C+AGR++DA R M+ P TY ++++G T
Sbjct: 545 LS---VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTT 601
Query: 558 EQY 560
++
Sbjct: 602 RRF 604
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 104/266 (39%), Gaps = 32/266 (12%)
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV-MDISSSGLQL--DVGNYDALIE 446
++ M GC+ + Y LK +C E R EA +L+ M S G +V +Y +I
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
T A++LF +M + I +Y T++ GL + + +++ D V+
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI-DKGVK 270
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI-----NGYVTAEQYF 561
+N +IH + G+ ++ R L M +P+ TY SL+ NG ++
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330
Query: 562 SVLMMWHEIKRKISTDG-----------------------QKGIKFEHNLVDAFLYALVK 598
M+ IK ++ G + G+ +H++ + A K
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390
Query: 599 GGFFDAVMQVVEKSQEMKVFVDKWKY 624
D M + K ++ + D Y
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNY 416
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 158/367 (43%), Gaps = 44/367 (11%)
Query: 216 MKPNIYACNAALEGCCYGLQ-SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+KPN+ + G Y + ++S+ ++ M G+ P+ F + YA K + ++
Sbjct: 339 IKPNVAIYGILIHG--YATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE 396
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA------------SRTIL----LCL 318
+ + + M + G S +V Y +LI KLG ++ A + I L
Sbjct: 397 AMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVY 456
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNV---KGLANLIIEAQKLEPSGIV-VDRSVGF-- 372
G +++ + +KE Y E++ ++ V L NL + Q ++ ++ + VG
Sbjct: 457 GLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516
Query: 373 GIIS-------ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
G+IS C+ +G D+A LD M + G Y L YC+ R +A +
Sbjct: 517 GVISYTTLIGGHCL-VGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGV 575
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM----REARIYDLKGSYLTIMT 481
++ +G+ V Y ++ T++ F A L+ +M ++ I+ Y I+
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIW----IYNIILN 631
Query: 482 GLMENH-RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL +N+ E F +D ++E+ T +N +I A K+GR EDA +
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITT--FNIMIGALFKSGRNEDAMHLFATISSYGL 689
Query: 541 EPNDQTY 547
P+ TY
Sbjct: 690 VPDVFTY 696
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 165/428 (38%), Gaps = 67/428 (15%)
Query: 208 ALDENLDFMKPNIYACNAALEGCCYGLQ-------SVSDAEKVIETMSVLGVRPNESSFG 260
A+++ L M+ N+ + LEG G+ V +A V E M P+ S+
Sbjct: 58 AMEDVLAEMRKNVDS--KMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYN 115
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
+ + G + ++ M + G + ++ + + G +A R + G
Sbjct: 116 AIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQ 175
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA----QKLEPSGIVVDRSVGFGIIS 376
G +F+ +YC V+ GF + N IEA ++ GI D +I
Sbjct: 176 G----CEFNAVSYCAVISGFYKE-------NCQIEAYHLFDEMLKQGICPDILTFNKLIH 224
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
G ++ + ++ G L + ++ C++ EA +L+ I S GL
Sbjct: 225 VLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTP 284
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
DV +Y+ LI F + EA Y L
Sbjct: 285 DVISYNTLI----------CGFCKHSKLVEAECY-------------------------L 309
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
++V + VE +N+II+ FCKAG +++A + LR +F F P++ TY SLING
Sbjct: 310 HKMV-NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368
Query: 557 AEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMK 616
+ +++E +KG K L + + L K G +Q+++ E
Sbjct: 369 DGDMNRAMAVFYEAM-------EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHG 421
Query: 617 VFVDKWKY 624
D W Y
Sbjct: 422 CSPDIWTY 429
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 159/363 (43%), Gaps = 14/363 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQEKIV 276
P+I N + C +V ++EK+ + GV PN +F KG + E
Sbjct: 214 PDILTFNKLIHVLCKK-GNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAAR 272
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
LES+++E G + ++ Y++LI G+ K L A + + G +E ++F TY +
Sbjct: 273 LLESIVSE-GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG-VEPNEF---TYNTI 327
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ GF + G ++ ++ +A G + D +I+ N G ++A ++ E
Sbjct: 328 INGFCKAGMMQNADKILRDAMF---KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + +Y +K K+ +A QL+ D+ G D+ Y+ ++
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444
Query: 457 AFSLFRD-MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A + D + + I D+ ++ T++ G + + LD ++ + +N++
Sbjct: 445 ANGILNDAIAKGCIPDI-FTFNTLIDGYCKQRNMDKAIEILDTMLSHG-ITPDVITYNTL 502
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK-RKI 574
++ CKA +L++ T + M+ PN TY LI + + + ++ E+K R +
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562
Query: 575 STD 577
+ D
Sbjct: 563 TPD 565
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 138/341 (40%), Gaps = 12/341 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN + N + G C + +A+K++ G P+E ++ L G +
Sbjct: 317 VEPNEFTYNTIINGFCKA-GMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ + E GF ++ Y++L+ G K G + A + + +M + S + TY
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLM------KDMMEHGCSPDIWTY 429
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
VV G + G + ++ +A G + D +I DKA ILD
Sbjct: 430 NLVVNGLCKMGCLSDANGILNDAI---AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + G + + Y L CK + + G ++ Y+ LIE+ +
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A LF++M+ + + T++ GL N + + ++ + T +N
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFN 606
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+I+AFC+ + A++ +M P++ TY +I+ Y
Sbjct: 607 IMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSY 647
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 15/341 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P++ + + G C V++A +++E M+ GV P+ +++ + G ++
Sbjct: 7 EPDVVTYSTIISGLCK-TGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEAD 65
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
EL M E G S+ V Y++LI+G K N+E A + +L + E + TY +
Sbjct: 66 ELFHKMIERGCSANTVAYNALINGLCKDENIERAYK-LLEEMASKGYEPDNI---TYNTI 121
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ G + G V + G D G++ A G +A + M+
Sbjct: 122 LSGLCRMGKVSEAKQFF---DSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178
Query: 397 CGCSVG--LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
V L Y + +C+ +T EA +L D+ + G D Y++++ +
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD--EVVEDPRVEVKTHDW 512
A +F+ M ++ +Y +++G + R MA L+ E + + R
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSG---HCRVGNMARCLELYEEMTEKRFSPDVLLC 295
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
N++I CKA +++DA + L M + P+ TY L++G
Sbjct: 296 NAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDG 336
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 192/479 (40%), Gaps = 29/479 (6%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKN--PKLLDF 142
DEA + F + + N+LI + L + N++RA+ + + K P + +
Sbjct: 62 DEADELFHKMIERGCSANTVAYNALI---NGLCKDENIERAYKLLEEMASKGYEPDNITY 118
Query: 143 QTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE 202
T+ + L M + A F +R + P + L+D K +F+
Sbjct: 119 NTILSGLCRMGKVSEAKQFFD----SMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFK 174
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
+D + P++ N ++G C ++ +A K+ + + G P+ ++ +
Sbjct: 175 -----TMDMADRKVAPDLITYNTLIDGFCR-VEKTDEAMKLFKDVIAKGYMPDTVTYNSI 228
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
A K ++ E+ M + G + YS ++SG+ ++GN+ +R + L
Sbjct: 229 LLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNM---ARCLELY---EE 282
Query: 323 MEQSDFSKETY-CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
M + FS + C V L A+ ++E ++ G V D ++
Sbjct: 283 MTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLE--EMSKIGAVPDVVTYNILLDGLCKT 340
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
L DKAH + M GC+ + Y L CK ++ +A L + L DV +
Sbjct: 341 NLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTF 400
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+ L++ + A L M E + + T+M GL + R + +VE
Sbjct: 401 NILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVE 460
Query: 502 DPRV-EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL--QFEPNDQTYLSLINGYVTA 557
V +V H N ++ C+ G+L A + M+ +F P+ TY +L+N + A
Sbjct: 461 KGTVADVLPH--NIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEA 517
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 142/350 (40%), Gaps = 27/350 (7%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKG 339
M E GF +V YS++ISG K G + A + M + + + TY +V
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMV------EEMTEKGVNPDVATYTIIVDR 54
Query: 340 FLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
+ G V L K+ G + +I+ ++A+ +L+EM + G
Sbjct: 55 LCRAGKVDEADELF---HKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY 111
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
Y L C+ + +EA Q + S G DV Y+ L++A A+
Sbjct: 112 EPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWG 171
Query: 460 LFR--DMREARIYDLKGSYLTIMTGLMENHRP-ELMAAFLDEVVEDPRVEVKTHDWNSII 516
LF+ DM + ++ +Y T++ G + E M F D + + + T +NSI+
Sbjct: 172 LFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVT--YNSIL 229
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+ +++A+ ++M+ PN TY +++G+ L ++ E+ K
Sbjct: 230 LGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEK--- 286
Query: 577 DGQKGIKFEHN--LVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+F + L +A + L K D +V+E+ ++ D Y
Sbjct: 287 ------RFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTY 330
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 149/411 (36%), Gaps = 65/411 (15%)
Query: 84 TDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQ 143
TDEA K FK + A P NS++ L+ + + F K++D
Sbjct: 203 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK----------KMVD-- 250
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
+ AP A + CR N L+++EE
Sbjct: 251 ------------SGCAPNGATYSIVLSGH---------------CRV-GNMARCLELYEE 282
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
P++ CNA ++ C + V DA KV+E MS +G P+ ++ L
Sbjct: 283 MTEKRF-------SPDVLLCNAVIDMLCKA-KKVDDAHKVLEEMSKIGAVPDVVTYNILL 334
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
L +K EL S M + G + +V YS +++G K + A R + M
Sbjct: 335 DGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA-RVLF-----DRM 388
Query: 324 EQSDFSKE--TYCEVVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACV 379
+ + T+ ++ G + G + +L ++ + P G+ ++
Sbjct: 389 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTT-----LMHGLC 443
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL--D 437
+D+A + M G + + L C+E + A+A + S + D
Sbjct: 444 RDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPD 503
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
V Y L+ A I + A F+ M + +Y T+M GL + R
Sbjct: 504 VVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGR 554
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 167/405 (41%), Gaps = 29/405 (7%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ N+ + G C S A ++ M V+ + ++ + G + +
Sbjct: 167 QPNVVTYNSIVNGICKS-GDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAI 225
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
L M G S +V Y+SL+ G K G + + +M T+
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLL------KDMTSRKIIPNVITFN 279
Query: 335 EVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSIL 391
++ F++ G ++ L E + + P+ I + + G+ C+ LS+ A+++L
Sbjct: 280 VLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGY-----CMQNRLSE-ANNML 333
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
D M CS + + +K YCK R E +L IS GL + Y L++ S
Sbjct: 334 DLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQS 393
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ A LF++M + +Y ++ GL +N + E A + E ++ ++ +
Sbjct: 394 GKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLE-KALEIFEDLQKSKMNLDIVM 452
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+ II CK G++EDA + +PN TY +I+G ++
Sbjct: 453 YTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL---- 508
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMK 616
RK+ DG + +N + A ++ G A +++E EMK
Sbjct: 509 RKMEEDGNEPNDCTYN---TLIRAHLRDGDLTASAKLIE---EMK 547
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 139/356 (39%), Gaps = 56/356 (15%)
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
L G+ I L ++N F + F S++ +KLG E + T + G +E S
Sbjct: 93 LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG-YEPDTTTFNTLINGLCLE-SK 150
Query: 328 FSKE-----------------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
S+ TY +V G ++G+ +L+ +K++ + D
Sbjct: 151 VSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLL---RKMDERNVKADVFT 207
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
II + G D A S+ EM G L Y + CK + + QL+ D++
Sbjct: 208 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMT 267
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
S + +V ++ LI+ + Q A L+++M I +Y ++M G +R
Sbjct: 268 SRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLS 327
Query: 491 LMAAFLDEVVED-------------------PRVE---------------VKTHDWNSII 516
LD +V + RV+ T ++ ++
Sbjct: 328 EANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILV 387
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
FC++G+LE A+ + M+ L P+ TY L++G + L ++ ++++
Sbjct: 388 QGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 443
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 93/440 (21%), Positives = 185/440 (42%), Gaps = 30/440 (6%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T TL+ + +A A L+ M ++ ++ L C K + + KV
Sbjct: 128 DVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYC-KTGRWESVGKV 186
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSF 259
FEE ++ P++ A ++ C +G V A +V++ M+ G+ PN ++
Sbjct: 187 FEEMSGRGIE-------PDVVMYTALIDSLCRHG--KVKKAARVMDMMTERGLEPNVVTY 237
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
L +G + ++L M+E G +V Y++LI+G + ++ A + +
Sbjct: 238 NVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQ 297
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRS-----VGFGI 374
G + D T+ V+ G + G ++ Q L+ ++ + V F +
Sbjct: 298 GETRVRPDLM--TFNSVIHGLCKIGWMR---------QALQVRAMMAENGCRCNLVAFNL 346
Query: 375 -ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
I + + KA ++DEM + G Y + +CK + A + ++ G
Sbjct: 347 LIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQG 406
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ + +Y L++A A LF +M D +Y T++ G ++ ++
Sbjct: 407 MEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLD-AAAYSTMIHGAFKSGEKKIAE 465
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
FL +++++ + ++ I+ F K+G L A+R L++M F P+ + SLI G
Sbjct: 466 EFLKDMIDEGLIP-DAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQG 524
Query: 554 YVTAEQYFSVLMMWHEIKRK 573
Y +L + E+ K
Sbjct: 525 YGAKGDTEKILELTREMTAK 544
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 92/438 (21%), Positives = 154/438 (35%), Gaps = 104/438 (23%)
Query: 180 WGGFLVDICRKNSNFVAF--LKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSV 237
+ L +CR+ A L+V R+A +PN + + C +
Sbjct: 59 YNTVLAALCRQGCLDAALFLLRVMSHEPRLA-------SRPNAISYTTLMRALCAD-RRA 110
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
+ A ++ +M GVRP+ ++G L + VEL + M E G +V YS L
Sbjct: 111 AQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCL 170
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
+ GY K G ES + +
Sbjct: 171 LHGYCKTGRWESVGKVF------------------------------------------E 188
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
++ GI D + +I + G KA ++D M G + Y + + CKE
Sbjct: 189 EMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEG 248
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR--EARIYDLKGS 475
EA L ++S G+Q DV Y+ LI + + A +L +M E R+
Sbjct: 249 SVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRV------ 302
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
RP+LM +NS+IH CK G + A + M
Sbjct: 303 ------------RPDLMT------------------FNSVIHGLCKIGWMRQALQVRAMM 332
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYA 595
N + LI G + + + + E+ G++ D+F Y+
Sbjct: 333 AENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEM-------ASSGLQ-----PDSFTYS 380
Query: 596 LVKGGFFDAVMQVVEKSQ 613
++ GF M+ VE+++
Sbjct: 381 ILINGFCK--MRQVERAE 396
>gi|297844926|ref|XP_002890344.1| F18O14.27 [Arabidopsis lyrata subsp. lyrata]
gi|297336186|gb|EFH66603.1| F18O14.27 [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 139/320 (43%), Gaps = 17/320 (5%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ D E++++ MS G+ P+ + L ++Y+ G E+ E + +G Y +
Sbjct: 402 IEDVERILKKMSQNGIFPDILTATSLVHMYSKSGNLERATEAFENLKSYGLRLDEKIYEA 461
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLII 354
+I GYV G + R + M+ + S+E Y +++ + Q G+ G A I
Sbjct: 462 MIMGYVNAGKPKLGERLV------KEMQAKELKASEEVYMALLRAYAQMGDANGAAG--I 513
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
+ L S + + A G DKA S DEM G ++AY
Sbjct: 514 SSSMLYASNDPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYK 573
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF---RDMREARIYD 471
E+ +A +L++ + G+++ V Y L++ + A L + EA ++
Sbjct: 574 GENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFE 633
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
L+ S L M + N + L A V+E R ++ ++++ +I A K G +DA+R
Sbjct: 634 LQVS-LCCMYSSVRNEKKTLQALG---VLEAKRDQMGPNEFDKVITALKKGGFEKDARRM 689
Query: 532 LRRMIFLQFEPNDQTYLSLI 551
+ M +F P+ + + ++
Sbjct: 690 YKYMEARKFLPSQRLQMDMV 709
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 69/165 (41%)
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
IL +M+ G + + Y K AT+ ++ S GL+LD Y+A+I +
Sbjct: 408 ILKKMSQNGIFPDILTATSLVHMYSKSGNLERATEAFENLKSYGLRLDEKIYEAMIMGYV 467
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
+ + L ++M+ + + Y+ ++ + A ++ +
Sbjct: 468 NAGKPKLGERLVKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMLYASNDPLSF 527
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++ + A+ KAG+++ AK M L +P+D+ +L+ Y
Sbjct: 528 EAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAY 572
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 148/363 (40%), Gaps = 50/363 (13%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
++E R+ + + +KP+ Y + L C +A ++M G++PN + +G
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN-GRCREARFFFDSMIRKGIKPNVAIYG 347
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
L + YA KG ++ +L +LM E G S ++ + + Y K ++ A
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI------- 400
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACV 379
F+K ++ Q L P V FG +I A
Sbjct: 401 -------FNK-----------------------MKQQGLSPD------VVNFGALIDALC 424
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
LG D A ++M G + + V+ + C + +A + ++ + G++ DV
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVV 484
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
++ ++ T A L M SY T++ G R + A LD +
Sbjct: 485 FFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVM 544
Query: 500 VEDPRVEVKTHDW--NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ V +K +W N+++H +C+AGR++DA R M+ P TY ++++G T
Sbjct: 545 LS---VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTT 601
Query: 558 EQY 560
++
Sbjct: 602 RRF 604
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 154/366 (42%), Gaps = 15/366 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN+ ++G C Q V AE V + M GV+P+ ++ L + Y G +++
Sbjct: 234 IQPNVVTYTTVIDGLCKA-QVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEV 292
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V + M+ G Y SL++ G A + G Y
Sbjct: 293 VRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNV----AIYGI 348
Query: 336 VVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ G+ G + L NL++E +G+ D + I +A + D+A I +
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVE------NGLSPDHHIFNIIFTAYAKKAMIDEAMHIFN 402
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M G S + + + A CK R +A + + G+ ++ +++L+ T
Sbjct: 403 KMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVD 462
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
++ A + +M I + TI+ L + + A L +++E +
Sbjct: 463 KWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV-MKAQRLIDLMERVGTRPDVISY 521
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
++I C GR+++A ++L M+ + +P++ TY +L++GY A + ++ E+ R
Sbjct: 522 TTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLR 581
Query: 573 KISTDG 578
T G
Sbjct: 582 NGITPG 587
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 32/256 (12%)
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV-MDISSSGLQL--DVGNYDALIE 446
++ M GC+ + Y LK +C E R EA +L+ M S G +V +Y +I
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
T A++LF +M + I +Y T++ GL + + +++ D V+
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI-DKGVK 270
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI-----NGYVTAEQYF 561
+N +IH + G+ ++ R L M +P+ TY SL+ NG ++F
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330
Query: 562 SVLMMWHEIKRKISTDG-----------------------QKGIKFEHNLVDAFLYALVK 598
M+ IK ++ G + G+ +H++ + A K
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390
Query: 599 GGFFDAVMQVVEKSQE 614
D M + K ++
Sbjct: 391 KAMIDEAMHIFNKMKQ 406
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 155/366 (42%), Gaps = 42/366 (11%)
Query: 216 MKPNIYACNAALEGCCYGLQ-SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+KPN+ + G Y + ++S+ ++ M G+ P+ F + YA K + ++
Sbjct: 339 IKPNVAIYGILIHG--YATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE 396
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA------------SRTIL----LCL 318
+ + + M + G S +V + +LI KLG ++ A + I L
Sbjct: 397 AMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVY 456
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNV---KGLANL-----IIEAQKL----EPSGIVV 366
G +++ + +KE Y E++ ++ V L NL +++AQ+L E G
Sbjct: 457 GLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D +I +G D+A LD M + G Y L YC+ R +A +
Sbjct: 517 DVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVF 576
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM----REARIYDLKGSYLTIMTG 482
++ +G+ V Y ++ T++ F A L+ +M ++ I+ Y I+ G
Sbjct: 577 REMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIW----IYNIILNG 632
Query: 483 LMENH-RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
L +N+ E F +D ++E+ T +N +I A K+GR EDA +
Sbjct: 633 LSKNNCVDEAFKLFQSLCSKDFQLEITT--FNIMIGALFKSGRNEDAMHLFATISSYGLV 690
Query: 542 PNDQTY 547
P+ TY
Sbjct: 691 PDVFTY 696
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 70/378 (18%), Positives = 132/378 (34%), Gaps = 68/378 (17%)
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
K L+E + L M E G + +V Y++L+ G+ E A +L +
Sbjct: 143 KRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALE-LLHMMADSQGRSCPP 201
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
+ +Y V+ GF G V DKA+
Sbjct: 202 NVVSYATVINGFFTEGQV--------------------------------------DKAY 223
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
++ EM G + Y + CK A + + G++ D Y+ LI
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRV 505
++ ++ + +M + +Y +++ L N R F D ++ P V
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNV 343
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
+ + +IH + G L + L M+ P+ + + Y +
Sbjct: 344 AI----YGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399
Query: 566 MWHEIKRKISTDGQKGIKFEHNLVDAFLYALVK-GGFFDAVM---QVVEKSQEMKVF--- 618
+++++K Q+G+ + A + AL K G DAV+ Q++ + +F
Sbjct: 400 IFNKMK-------QQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452
Query: 619 --------VDKWKYKQAF 628
VDKW+ + F
Sbjct: 453 SLVYGLCTVDKWEKAKEF 470
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 127/307 (41%), Gaps = 13/307 (4%)
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
LG++PN +F L +G ++ E+ M + G+ + +++LI G K G E
Sbjct: 295 LGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEK 354
Query: 310 ASRTILLCLGGGNMEQSDFSK---ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
A R L + +SD K TY ++ G+ + + L+ +++ G+V
Sbjct: 355 AFRLFL------KLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLL---SRMKEQGLVP 405
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+ +I G +KA+ ++D M G S + Y + + CK+ R EA +L+
Sbjct: 406 NTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLL 465
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
GLQ D Y LI D + A F M +A + +Y T++
Sbjct: 466 KKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQ 525
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
R E E V V K + S+I +C+ + A + RM P+ T
Sbjct: 526 RRMEESEKLFAEAVGLGLVPTK-ETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLT 584
Query: 547 YLSLING 553
Y +LI+G
Sbjct: 585 YGALISG 591
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 151/392 (38%), Gaps = 56/392 (14%)
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC----LGGGNMEQSD 327
++ I + SL +E G + F++ I G+ K R ++C +G N E++
Sbjct: 106 EQAITVVASLASEAGSMVALSFFNWAI-GFPKFRYF---MRFYIVCATSFIGNENFERA- 160
Query: 328 FSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
E +V+ F + G + N++IE +E G+V+ + +GL A
Sbjct: 161 --HEVMDCMVRVFAEIGKFQEAVNMVIE---MENHGLVLTVRTLNCVTGVAGEMGLVGYA 215
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD---------- 437
++ DEM G Y AYC+ R ++ + + D+ G +D
Sbjct: 216 ENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMIST 275
Query: 438 -------------------------VGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
+ N+ +LI + AF + +M +
Sbjct: 276 FCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPN 335
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
++ ++ GL + E ++V + H + S+IH +CK +L A+ L
Sbjct: 336 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLL 395
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAF 592
RM PN +TY LI+G+ A + +E+ + +G F +N AF
Sbjct: 396 SRMKEQGLVPNTKTYTCLIDGHSKAGNFEKA----YELMDLMGKEGFSANIFTYN---AF 448
Query: 593 LYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ +L K G F ++++K + + D Y
Sbjct: 449 IDSLCKKGRFLEACKLLKKGFRLGLQADTVTY 480
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 154/393 (39%), Gaps = 40/393 (10%)
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKN---SN 193
P L++F + L+ + + AF +++ M K + + +C+K
Sbjct: 299 PNLINFTS---LINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKA 355
Query: 194 FVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR 253
F FLK+ D KPN++ + + G C ++ AE ++ M G+
Sbjct: 356 FRLFLKLVRS----------DDYKPNVHTYTSMIHGYCKE-DKLNRAEMLLSRMKEQGLV 404
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT 313
PN ++ L ++ G EK EL LM + GFS+ + Y++ I K G A +
Sbjct: 405 PNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACK- 463
Query: 314 ILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG 373
LL G Q+D TY ++ + + + ++ K+ +G+ D
Sbjct: 464 -LLKKGFRLGLQAD--TVTYTILISELCRRADTR---EALVFFSKMFKAGVQPDMHTYNT 517
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGV------YVPTLKAYCKEHRTAEATQLVM 427
+I+A +++ + E +VGLG+ Y + YC++ + A +
Sbjct: 518 LIAAFSRQRRMEESEKLFAE------AVGLGLVPTKETYTSMICGYCRDRNVSLALKFFN 571
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+S G D Y ALI A L+ M + + + + LT+ +
Sbjct: 572 RMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQD 631
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFC 520
L+ + D ++ ++T N++I C
Sbjct: 632 DSATAMVILERL--DKKLWIRT--VNTLIRKLC 660
>gi|186478661|ref|NP_564088.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|8778424|gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana]
gi|332191742|gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 725
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 140/320 (43%), Gaps = 17/320 (5%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ D E++++ MS G+ P+ + L ++Y+ G E+ E + +G Y +
Sbjct: 400 IEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEA 459
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLII 354
+I GYV G + R + M+ + S+E Y +++ + Q G+ G A +
Sbjct: 460 MILGYVNAGKPKLGERLM------KEMQAKELKASEEVYMALLRAYAQMGDANGAAGISS 513
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
Q + + F + A G DKA S DEM G ++AY
Sbjct: 514 SMQYASDGPLSFEAYSLF--VEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYK 571
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF---RDMREARIYD 471
E+ +A +L++ + G+++ V Y L++ + A L + EA ++
Sbjct: 572 GENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFE 631
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
L+ S + +G+ N + L A V+E R ++ ++++ +I A + G +DA+R
Sbjct: 632 LQVSLCCMYSGV-RNEKKTLQALG---VLEAKRDQMGPNEFDKVISALKRGGFEKDARRM 687
Query: 532 LRRMIFLQFEPNDQTYLSLI 551
+ M +F P+ + + ++
Sbjct: 688 YKYMEARKFLPSQRLQMDMV 707
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 123/309 (39%), Gaps = 17/309 (5%)
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
K +QE + +E + G + + Y++L++G K+G LE A + + G
Sbjct: 48 KKIQEAVALMEKITAN-GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV-- 104
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLS 384
TY ++ G G EA KL G+ +D +I + G
Sbjct: 105 --VTYTSLIDGL-------GKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKI 155
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
+A S+ M + GC + + CK R A ++ + + GL + Y AL
Sbjct: 156 PQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 215
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I ++ A + M++A +Y ++ GL ++ AF DE++E
Sbjct: 216 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLE-AG 274
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+ + +N +I FCKAG + A M + PN TY +LI+G Q
Sbjct: 275 CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKAS 334
Query: 565 MMWHEIKRK 573
+ + +K +
Sbjct: 335 LYYQHMKER 343
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 9/242 (3%)
Query: 340 FLQNGNVKGLANLIIEA----QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
L NG VK A ++I+A Q+ +G +D I+ +A ++++++
Sbjct: 4 ILINGLVK--AGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A GC+ + Y L CK R EA L+ I +G DV Y +LI+ +
Sbjct: 62 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNS 514
A+ LF++M + Y ++ GL++ + P+ + + + +V T ++
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVT--LST 179
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+I CKAGR+ A R + M PN+ Y +LI+G A + L M ++K+
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239
Query: 575 ST 576
T
Sbjct: 240 CT 241
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 140/359 (38%), Gaps = 12/359 (3%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
+ + +A ++E ++ G P +++ L G E+ ++L + + G + +V Y
Sbjct: 48 KKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 107
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC--EVVKGFLQNGNVKGLANL 352
+SLI G K A + M + +T C +++G LQ G + +++
Sbjct: 108 TSLIDGLGKKKRSFEAYKLF------KEMASRGLALDTVCYTALIRGLLQAGKIPQASSV 161
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ + G V D +I G A I M A G + VY +
Sbjct: 162 Y---KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 218
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
CK + A +++ + + D Y+ LI+ S D +A + F +M EA
Sbjct: 219 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPD 278
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+Y +++G + + D++ R + ++I CK +L A
Sbjct: 279 VYTYNILISGFCKAGNTDAACGVFDDM-SSSRCSPNVVTYGTLISGLCKRRQLTKASLYY 337
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDA 591
+ M P+ Y SL++G + + M++ E++R + Q + +L A
Sbjct: 338 QHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKA 396
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 125/323 (38%), Gaps = 28/323 (8%)
Query: 226 ALEGCCYG------LQS--VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
AL+ CY LQ+ + A V +TM+ G P+ + + G V
Sbjct: 136 ALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVR 195
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCE 335
+ M G + V YS+LI G K ++ A + M+++ + +T Y
Sbjct: 196 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML------AQMKKAFCTPDTITYNI 249
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G ++G+V E + +G D +IS G +D A + D+M+
Sbjct: 250 LIDGLCKSGDVAAARAFFDE---MLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMS 306
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
+ CS + Y + CK + +A+ + G D Y +L++ S +
Sbjct: 307 SSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLE 366
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE---LMAAFLDEVVEDPRVEVKTHDW 512
LF +M + + + + I N E L A E + P + +
Sbjct: 367 GGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHP------YAY 420
Query: 513 NSIIHAFCKAGRLEDAKRTLRRM 535
NSII A K+G++ + + + M
Sbjct: 421 NSIISALIKSGKVNEGQAVYQEM 443
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 151/374 (40%), Gaps = 31/374 (8%)
Query: 217 KPNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
KP+I + + L G S ++D + M G+ PN+ F L YA G+ +K
Sbjct: 382 KPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKA 441
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------------SRTILLCLGGG 321
+ + M G V ++++IS ++G L+ A S + CL G
Sbjct: 442 MLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG 501
Query: 322 NMEQSDF--SKETYCEVVKGFLQNGNVKGLANLI---IEAQKLEPSGIVVDRSVGFG--- 373
+ +KE E++ + VK +++I + ++ ++D V G
Sbjct: 502 CCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP 561
Query: 374 -------IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
++ +G ++A ++LD M + G +Y + YCK R +A +
Sbjct: 562 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 621
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
D+ G++ Y ++ ++ +A +F +M E+ +Y ++ GL N
Sbjct: 622 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRN 681
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ + L+++ V+ +N +I A K GR ++AK + PN QT
Sbjct: 682 NCTDEANMLLEKLFA-MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQT 740
Query: 547 YLSLINGYVTAEQY 560
Y +I + E Y
Sbjct: 741 YSMMITNLIKEESY 754
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 162/395 (41%), Gaps = 30/395 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+++ + ++G C +++ AE+V+E M G RPN ++ L + Y++ G+ +
Sbjct: 276 IAPDLFTYSLIIDGLCKS-KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL--LCLGGGNMEQSDFSK--E 331
V + M+ G + +S I K G A + I + L G + +S
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA-KCIFDSMVLKGPKPDIISYSTMLH 393
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
Y L +V + NL++ GI ++ V +I+A G+ DKA I
Sbjct: 394 GYATATDSCL--ADVHNIFNLMLT------KGIAPNKHVFNILINAYARCGMMDKAMLIF 445
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++M G + + + C+ R +A + G+ Y LI+
Sbjct: 446 EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNH 505
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYL-TIMTGLMENHRPELMAAFLDEVVE-DPRVEVKT 509
+ A L +M I Y +I+ L + R +D +V+ R V T
Sbjct: 506 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 565
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+NS++ +C G +E+A L M + EPN Y +L++GY + L ++ +
Sbjct: 566 --FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 623
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDA 604
+ KG+K + LY+++ G F A
Sbjct: 624 ML-------HKGVK-----PTSVLYSIILHGLFQA 646
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 8/254 (3%)
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
+ +I V G DKAH + EM G + + +K CK +A +V +
Sbjct: 214 YSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVD 273
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-MENHRPE 490
SG+ D+ Y +I+ S+ A + M EA +Y +++ G + E
Sbjct: 274 SGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNE 333
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+ F + + V + NS IHA K GR +AK M+ +P+ +Y ++
Sbjct: 334 SVRVF--KQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTM 391
Query: 551 INGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
++GY TA S L H I + T KGI ++ + + A + G D M + E
Sbjct: 392 LHGYATATD--SCLADVHNIFNLMLT---KGIAPNKHVFNILINAYARCGMMDKAMLIFE 446
Query: 611 KSQEMKVFVDKWKY 624
Q + D +
Sbjct: 447 DMQNKGMIPDTVTF 460
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 171/475 (36%), Gaps = 87/475 (18%)
Query: 57 QQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL 116
+Q + T+ N + + +H ++ +E+ + FK +++ + P+ NS I L
Sbjct: 304 EQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKH 363
Query: 117 QDNHNLKRAFASVVYVIEKNPKLLDFQT---------------VHTLLGSMRNANTAAPA 161
+ K F S+V K P ++ + T VH + M A
Sbjct: 364 GRTNEAKCIFDSMVLKGPK-PDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNK 422
Query: 162 F-------ALVKCMFKNRYFMPFELWGGFLVDICRKN--SNFVAFLKVFEECCRIA-LDE 211
A +C ++ + FE D+ K + V F V CRI LD+
Sbjct: 423 HVFNILINAYARCGMMDKAMLIFE-------DMQNKGMIPDTVTFATVISSLCRIGRLDD 475
Query: 212 NL-------DFMKPN---IYACNAALEGCCY----------------------GLQ---- 235
L D P +Y C ++GCC G++
Sbjct: 476 ALHKFNHMVDIGVPPSEAVYGC--LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 533
Query: 236 ---------SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG 286
V++ + +++ M G RPN +F L Y L G E+ L M G
Sbjct: 534 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 593
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV 346
Y +L+ GY K G ++ A L G S Y ++ G Q
Sbjct: 594 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL----YSIILHGLFQARRT 649
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
+ E +E V + G + C N +D+A+ +L+++ A + +
Sbjct: 650 TAAKKMFHEM--IESGTTVSIHTYGVVLGGLCRN-NCTDEANMLLEKLFAMNVKFDIITF 706
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ A K R EA +L IS+ GL ++ Y +I I + ++ A +LF
Sbjct: 707 NIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 761
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ Y + HR +V + +GL D +Y +LI + + A LF +M E +
Sbjct: 183 IDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGV 241
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+I+ L + + + + ++V D + ++ II CK+ ++ A+
Sbjct: 242 LPKILICNSIIKELCKMKEMDKAESIVQKMV-DSGIAPDLFTYSLIIDGLCKSKAMDKAE 300
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
R L +M+ PN TY SLI+GY S+ MW+E R G+ +
Sbjct: 301 RVLEQMVEAGTRPNSITYNSLIHGY-------SISGMWNESVRVFKQMSSCGVIPTVDNC 353
Query: 590 DAFLYALVKGG 600
++F++AL K G
Sbjct: 354 NSFIHALFKHG 364
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 57/304 (18%)
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC-EVVKGFLQNGNVKGLAN 351
F SLI G+VK G ++ A CL MEQ K C ++K + + +
Sbjct: 212 FSYSLIYGFVKDGEVDKAH-----CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAES 266
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++ QK+ SGI D II DKA +L++M G Y +
Sbjct: 267 IV---QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIH 323
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
Y E+ ++ +SS G+ V N ++ I A A +F M
Sbjct: 324 GYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMV------ 377
Query: 472 LKG------SYLTIMTG--------LMENH--------------------------RPEL 491
LKG SY T++ G L + H R +
Sbjct: 378 LKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGM 437
Query: 492 M--AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
M A + E +++ + T + ++I + C+ GRL+DA M+ + P++ Y
Sbjct: 438 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 497
Query: 550 LING 553
LI G
Sbjct: 498 LIQG 501
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 139/314 (44%), Gaps = 17/314 (5%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
V+ M GV N +FG + YA ++ V ++M ++G + + ++SL+S
Sbjct: 128 VVAIMRKEGV-ANVETFGIIMRKYARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALC 186
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
K N+ A + + FS + TY +++G+ G L + +
Sbjct: 187 KSKNVRKAQEIF-------DKMNNRFSPDAKTYSILLEGW---GRAPSLPKMREVYSDML 236
Query: 361 PSGIVVDRSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
+G D V +GI + A G ++A ++ +M++ GC +Y + Y + R
Sbjct: 237 AAGCQPD-IVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRI 295
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
+A +D+ G+ DV Y+ALI A + F++AF + DM+ I ++ I
Sbjct: 296 EDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNII 355
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ L+ + + +++ R + + + +I FC+ ++E A + + M Q
Sbjct: 356 LNTLISLGKDDEAYRVFRSMIK--RCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQ 413
Query: 540 FEPNDQTYLSLING 553
F P+ T+ LING
Sbjct: 414 FLPSMHTFSVLING 427
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 151/374 (40%), Gaps = 31/374 (8%)
Query: 217 KPNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
KP+I + + L G S ++D + M G+ PN+ F L YA G+ +K
Sbjct: 306 KPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKA 365
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------------SRTILLCLGGG 321
+ + M G V ++++IS ++G L+ A S + CL G
Sbjct: 366 MLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG 425
Query: 322 NMEQSDF--SKETYCEVVKGFLQNGNVKGLANLI---IEAQKLEPSGIVVDRSVGFG--- 373
+ +KE E++ + VK +++I + ++ ++D V G
Sbjct: 426 CCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP 485
Query: 374 -------IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
++ +G ++A ++LD M + G +Y + YCK R +A +
Sbjct: 486 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 545
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
D+ G++ Y ++ ++ +A +F +M E+ +Y ++ GL N
Sbjct: 546 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRN 605
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ + L+++ V+ +N +I A K GR ++AK + PN QT
Sbjct: 606 NCTDEANMLLEKLFA-MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQT 664
Query: 547 YLSLINGYVTAEQY 560
Y +I + E Y
Sbjct: 665 YSMMITNLIKEESY 678
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 162/395 (41%), Gaps = 30/395 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+++ + ++G C +++ AE+V+E M G RPN ++ L + Y++ G+ +
Sbjct: 200 IAPDLFTYSLIIDGLCKS-KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 258
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL--LCLGGGNMEQSDFSK--E 331
V + M+ G + +S I K G A + I + L G + +S
Sbjct: 259 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA-KCIFDSMVLKGPKPDIISYSTMLH 317
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
Y L +V + NL++ GI ++ V +I+A G+ DKA I
Sbjct: 318 GYATATDSCL--ADVHNIFNLMLT------KGIAPNKHVFNILINAYARCGMMDKAMLIF 369
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++M G + + + C+ R +A + G+ Y LI+
Sbjct: 370 EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNH 429
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYL-TIMTGLMENHRPELMAAFLDEVVE-DPRVEVKT 509
+ A L +M I Y +I+ L + R +D +V+ R V T
Sbjct: 430 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 489
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+NS++ +C G +E+A L M + EPN Y +L++GY + L ++ +
Sbjct: 490 --FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 547
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDA 604
+ KG+K + LY+++ G F A
Sbjct: 548 ML-------HKGVK-----PTSVLYSIILHGLFQA 570
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 12/256 (4%)
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
+ +I V G DKAH + EM G + + +K CK +A +V +
Sbjct: 138 YSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVD 197
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-MENHRPE 490
SG+ D+ Y +I+ S+ A + M EA +Y +++ G + E
Sbjct: 198 SGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNE 257
Query: 491 LMAAF--LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
+ F + P V+ + NS IHA K GR +AK M+ +P+ +Y
Sbjct: 258 SVRVFKQMSSCGVIPTVD----NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYS 313
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQV 608
++++GY TA S L H I + T KGI ++ + + A + G D M +
Sbjct: 314 TMLHGYATATD--SCLADVHNIFNLMLT---KGIAPNKHVFNILINAYARCGMMDKAMLI 368
Query: 609 VEKSQEMKVFVDKWKY 624
E Q + D +
Sbjct: 369 FEDMQNKGMIPDTVTF 384
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 171/475 (36%), Gaps = 87/475 (18%)
Query: 57 QQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL 116
+Q + T+ N + + +H ++ +E+ + FK +++ + P+ NS I L
Sbjct: 228 EQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKH 287
Query: 117 QDNHNLKRAFASVVYVIEKNPKLLDFQT---------------VHTLLGSMRNANTAAPA 161
+ K F S+V K P ++ + T VH + M A
Sbjct: 288 GRTNEAKCIFDSMVLKGPK-PDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNK 346
Query: 162 F-------ALVKCMFKNRYFMPFELWGGFLVDICRKN--SNFVAFLKVFEECCRIA-LDE 211
A +C ++ + FE D+ K + V F V CRI LD+
Sbjct: 347 HVFNILINAYARCGMMDKAMLIFE-------DMQNKGMIPDTVTFATVISSLCRIGRLDD 399
Query: 212 NL-------DFMKPN---IYACNAALEGCCY----------------------GLQ---- 235
L D P +Y C ++GCC G++
Sbjct: 400 ALHKFNHMVDIGVPPSEAVYGC--LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 457
Query: 236 ---------SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG 286
V++ + +++ M G RPN +F L Y L G E+ L M G
Sbjct: 458 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 517
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV 346
Y +L+ GY K G ++ A L G S Y ++ G Q
Sbjct: 518 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL----YSIILHGLFQARRT 573
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
+ E +E V + G + C N +D+A+ +L+++ A + +
Sbjct: 574 TAAKKMFHEM--IESGTTVSIHTYGVVLGGLCRN-NCTDEANMLLEKLFAMNVKFDIITF 630
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ A K R EA +L IS+ GL ++ Y +I I + ++ A +LF
Sbjct: 631 NIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 685
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ Y + HR +V + +GL D +Y +LI + + A LF +M E +
Sbjct: 107 IDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGV 165
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+I+ L + + + + ++V D + ++ II CK+ ++ A+
Sbjct: 166 LPKILICNSIIKELCKMKEMDKAESIVQKMV-DSGIAPDLFTYSLIIDGLCKSKAMDKAE 224
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
R L +M+ PN TY SLI+GY S+ MW+E R G+ +
Sbjct: 225 RVLEQMVEAGTRPNSITYNSLIHGY-------SISGMWNESVRVFKQMSSCGVIPTVDNC 277
Query: 590 DAFLYALVKGG 600
++F++AL K G
Sbjct: 278 NSFIHALFKHG 288
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 57/304 (18%)
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC-EVVKGFLQNGNVKGLAN 351
F SLI G+VK G ++ A CL MEQ K C ++K + + +
Sbjct: 136 FSYSLIYGFVKDGEVDKAH-----CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAES 190
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++ QK+ SGI D II DKA +L++M G Y +
Sbjct: 191 IV---QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIH 247
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
Y E+ ++ +SS G+ V N ++ I A A +F M
Sbjct: 248 GYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMV------ 301
Query: 472 LKG------SYLTIMTG--------LMENH--------------------------RPEL 491
LKG SY T++ G L + H R +
Sbjct: 302 LKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGM 361
Query: 492 M--AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
M A + E +++ + T + ++I + C+ GRL+DA M+ + P++ Y
Sbjct: 362 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 421
Query: 550 LING 553
LI G
Sbjct: 422 LIQG 425
>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g38730-like [Brachypodium distachyon]
Length = 599
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + D+M A G + L A + TA A ++ ++ +G+ ++ Y+A++
Sbjct: 130 AARVFDQMRARGLAPDAHACTALLTALARARMTATAHKVFNEMGRAGVAMNTHVYNAMLH 189
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ ++D A L M A + + S+ T++ L + A + E ++D VE
Sbjct: 190 VCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVI-ALYVRKGMQYEAMCVRERMQDEGVE 248
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY------------ 554
WN++IH CK GR+++A + MI EP+ TY +L++GY
Sbjct: 249 PDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKL 308
Query: 555 ---VTAEQYFSVLMMWHEIKRKISTDGQ-------------KGIKFEHNLVDAFLYALVK 598
+ A + ++ I RK+ DG+ + ++ +H + + + K
Sbjct: 309 REEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAK 368
Query: 599 GGFFDAVMQVVEKSQEMKVFVDKWKYK 625
G + +V ++ E + +D++ YK
Sbjct: 369 RGDMTSACKVKKRMMESGLQLDQFTYK 395
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 164/414 (39%), Gaps = 61/414 (14%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ +AC A L + + A KV M GV N + + ++ LK
Sbjct: 142 LAPDAHACTALLTALARARMTAT-AHKVFNEMGRAGVAMNTHVYNAMLHV-CLKARDALR 199
Query: 276 VE-LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--T 332
E L + M+ G ++++I+ YV+ G A +C+ M+ + T
Sbjct: 200 AEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQYEA-----MCVRE-RMQDEGVEPDIVT 253
Query: 333 YCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
+ V+ G + G +K A L + A +EP + ++ +G +A +
Sbjct: 254 WNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTT-----LVDGYCRIGDVGEAVKL 308
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+EM A G G+ Y ++ C++ + E L+ ++ +Q D + LI +
Sbjct: 309 REEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAK 368
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
D SA + + M E +GL LD+
Sbjct: 369 RGDMTSACKVKKRMME--------------SGLQ-----------LDQFT---------- 393
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+ ++IH FCKA L++AK L M+ F PN + L++G+ +VL++ E+
Sbjct: 394 -YKALIHGFCKAKELDEAKEALFEMMGRGFSPNYSVFSWLVDGFCKKNNTDAVLLIPDEL 452
Query: 571 KRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ +G+ + ++ + + L K G D +V+ + Q + VD Y
Sbjct: 453 IK-------RGLPPDKSVYRSLIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVY 499
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 164/379 (43%), Gaps = 24/379 (6%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
KVF E R + M ++Y NA L C ++ AE ++ M GV + S
Sbjct: 167 KVFNEMGRAGV-----AMNTHVY--NAMLHVCLKARDALR-AEGLMTRMDAAGVPLDRFS 218
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS--RTILL 316
F + LY KG+Q + + + M + G +V ++++I G K G ++ A+ RT ++
Sbjct: 219 FNTVIALYVRKGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMI 278
Query: 317 CLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
+E TY +V G+ + G+V L +++E G+V + II
Sbjct: 279 ---AAAVEPDTV---TYTTLVDGYCRIGDVGEAVKL---REEMEAGGMVPGVATYNAIIR 329
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
G + + +L EM+ + +Y K A ++ + SGLQL
Sbjct: 330 KLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQL 389
Query: 437 DVGNYDALIEASITSQDFQSAF-SLFRDMREARIYDLKGSYLT-IMTGLMENHRPELMAA 494
D Y ALI +++ A +LF M R + S + ++ G + + + +
Sbjct: 390 DQFTYKALIHGFCKAKELDEAKEALFEMM--GRGFSPNYSVFSWLVDGFCKKNNTDAVLL 447
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
DE+++ K+ + S+I CK G ++ A++ L +M E + Y +L +
Sbjct: 448 IPDELIKRGLPPDKS-VYRSLIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAYAH 506
Query: 555 VTAEQYFSVLMMWHEIKRK 573
+TA + + + +E+ RK
Sbjct: 507 LTAGKVAAASDILNEMARK 525
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 103/263 (39%), Gaps = 21/263 (7%)
Query: 193 NFVAFLKVFEECCRIA-------LDENLDF--MKPNIYACNAALEGCCYGLQSVSDAEKV 243
+ V + + + CRI L E ++ M P + NA + C + + +
Sbjct: 285 DTVTYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCED-GKMKEVNGL 343
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+ M V+ + + L YA +G +++ M E G Y +LI G+ K
Sbjct: 344 LSEMDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCK 403
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSK--ETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
L+ A + +G G FS + +V GF + N + ++ +L
Sbjct: 404 AKELDEAKEALFEMMGRG------FSPNYSVFSWLVDGFCKKNNTDAV---LLIPDELIK 454
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
G+ D+SV +I GL D A +L +M G V VY A+ + A
Sbjct: 455 RGLPPDKSVYRSLIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLTAGKVAA 514
Query: 422 ATQLVMDISSSGLQLDVGNYDAL 444
A+ ++ +++ + + Y+ L
Sbjct: 515 ASDILNEMARKQMSVTPQIYNCL 537
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 151/357 (42%), Gaps = 19/357 (5%)
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
E+ R+ D ++ + P+ + ++ G C+ + +A + + M G+ P+ +F
Sbjct: 423 EDGDRLLKDISVLGLLPDRSLFDISVSGLCWA-GRLDEAMEFLMDMLEKGLSPSIIAFNS 481
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
+ Y+ GL++K E LM FG + SSL+ G G L+ A+ I G
Sbjct: 482 VIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELI------G 535
Query: 322 NMEQSDFS--KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
M + S + ++ F + G+V G +L E +E GI D I
Sbjct: 536 QMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGE---MERRGIFPDVVAFSAFIDGLS 592
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
GL ++A+++ EM G Y + +CK + EA +L + GL D+
Sbjct: 593 KQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIF 652
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
+ +I +SA ++F DM + + +Y T++ G + +++ A D +
Sbjct: 653 TTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAF--DMVNA--DNL 708
Query: 500 VEDPRVEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
V D +N IH FC + R+ A L ++ PN TY S++NG
Sbjct: 709 VNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNG 765
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 141/373 (37%), Gaps = 46/373 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN +A N + CC ++ SDA M G P +F + + +G +V
Sbjct: 298 EPNAFAYNIVINACCIRGRT-SDALAWFNLMIERGCNPTVVTFNTVINAFCKEG---NVV 353
Query: 277 ELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASR---------------TILLCL 318
E L + E GFS + Y++L++GYVK+ ++ A+ T + +
Sbjct: 354 EARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILV 413
Query: 319 GG----GNMEQSDF------------SKETYCEVVKGFLQNGNVKGLANLIIEA--QKLE 360
G G E D + + V G G + +++ + L
Sbjct: 414 SGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLS 473
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
PS I + +I+A GL DKA M G + L R
Sbjct: 474 PSIIAFN-----SVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQ 528
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
EAT+L+ + GL ++ + L++ D A SL+ +M I+ ++ +
Sbjct: 529 EATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFI 588
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
GL + E E++ + +NS+I FCK G+L +A + + M
Sbjct: 589 DGLSKQGLVEEAYNVFLEMLRKGLIP-NNFAYNSLICGFCKCGKLNEALKLEKVMRHRGL 647
Query: 541 EPNDQTYLSLING 553
P+ T +I G
Sbjct: 648 LPDIFTTNMIIGG 660
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 100/233 (42%), Gaps = 14/233 (6%)
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKL--EPSGIVVDRSVGFGIISACVNLGLSDKA 387
K T+ ++ GF + G + +L+ K EP+ + +I+AC G + A
Sbjct: 266 KYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNI-----VINACCIRGRTSDA 320
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ + M GC+ + + + A+CKE EA +L + G + Y+ L+
Sbjct: 321 LAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNG 380
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
+ ++ A L+ +MR+ I ++ +++G + R E D +++D V
Sbjct: 381 YVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDG----DRLLKDISVLG 436
Query: 508 KTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
D ++ + C AGRL++A L M+ P+ + S+I Y A
Sbjct: 437 LLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQA 489
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 133/326 (40%), Gaps = 31/326 (9%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ C++ L G + +A ++I M G+ N +F L + +G +
Sbjct: 507 LTPSPSTCSSLLMGLSIN-GRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRG---DV 562
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
V +SL E G +V +S+ I G K G +E A L L G + ++F+
Sbjct: 563 VGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKG-LIPNNFA--- 618
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEP----SGIVVDRSVGFGIISACVNLGLSDKAH 388
Y ++ GF + G + EA KLE G++ D II G A
Sbjct: 619 YNSLICGFCKCGKLN-------EALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAI 671
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
++ +M+ G S + Y + YCK A LV + +SG D+ Y+ I
Sbjct: 672 NVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGF 731
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN--HRPELMAAFLDEVVEDPRVE 506
+S+ A + ++ A I +Y +++ G+ + R ++ A L ++ P V
Sbjct: 732 CSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDILDRAMILTARLLKMAFVPNVV 791
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTL 532
N ++ F K G E RTL
Sbjct: 792 TA----NLLLSQFYKQGMPE---RTL 810
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N++I+AFCK G + +A++ + + F PN Y +L+NGYV + M++ E++
Sbjct: 339 FNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMR 398
Query: 572 RK-ISTDG 578
+K I+ DG
Sbjct: 399 KKGIAPDG 406
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 131/313 (41%), Gaps = 12/313 (3%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+SDA +E + G +P+ L Y +K + + +M G Y+
Sbjct: 78 ISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTF 137
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLII 354
L++ K GN+ A + + ME S + T Y +VKG +GN+ +
Sbjct: 138 LVNHLCKRGNVGYAMQLV------EKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFL- 190
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
+L G+V + ++ A ++A +LDE+ A G L Y L C
Sbjct: 191 --DRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLC 248
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
KE R EA +L ++ S G +V +Y+ L+ + ++ A L +M
Sbjct: 249 KEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIV 308
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+Y ++ L + + E +DE++ P T +N II CK G++E L +
Sbjct: 309 TYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTAT-SYNPIIARLCKEGKVEAVVNCLDQ 367
Query: 535 MIFLQFEPNDQTY 547
MIF + PN+ T+
Sbjct: 368 MIFGRCSPNEGTF 380
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 151/371 (40%), Gaps = 32/371 (8%)
Query: 204 CCRIALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPN 255
C L+++L F+ PN + ++ LE Y + V++A ++++ + G +PN
Sbjct: 178 CMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAA-YKERGVNEAMRLLDEIIAKGGQPN 236
Query: 256 ESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL 315
S+ L +G E+ + L + GFS +V Y+ L+ G E A+
Sbjct: 237 LVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANEL-- 294
Query: 316 LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ--KLEPSGI----VVDRS 369
L N + S TY ++ +G ++ +I E +P+ ++ R
Sbjct: 295 --LAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARL 352
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
G + A VN LD+M CS G + + C E + EA L+ +
Sbjct: 353 CKEGKVEAVVN---------CLDQMIFGRCSPNEGTF-NAIAVLCYEGKVQEAFSLIQSL 402
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-MENHR 488
+ Y ++ + AF L +M + +Y +++ GL +E
Sbjct: 403 GNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGML 462
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
E M F +++E+ ++N++I FCK+ R + + MI + P++ TY
Sbjct: 463 YEAMEIF--KLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYT 520
Query: 549 SLINGYVTAEQ 559
L+ G + E+
Sbjct: 521 ILVEGIIHEEE 531
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 118/312 (37%), Gaps = 32/312 (10%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ + N L G C + +A ++ + + G PN S+ L +G E+
Sbjct: 234 QPNLVSYNVLLTGLCKE-GRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEAN 292
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG--------NMEQSDF 328
EL + MN S +V Y+ LI G +E A + I + G N +
Sbjct: 293 ELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARL 352
Query: 329 SKETYCEVVKGFLQN----------GNVKGLANLIIEAQKLEPSGIVVDRSVGF------ 372
KE E V L G +A L E + E ++ +S+G
Sbjct: 353 CKEGKVEAVVNCLDQMIFGRCSPNEGTFNAIAVLCYEGKVQEAFSLI--QSLGNKQNSSI 410
Query: 373 -----GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
G++S G + A +L EM G + Y ++ C E EA ++
Sbjct: 411 HDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFK 470
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ + D+ N++ALI S + +F M E + +Y ++ G++
Sbjct: 471 LLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEE 530
Query: 488 RPELMAAFLDEV 499
EL A L E+
Sbjct: 531 EKELAAEVLREL 542
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 149/348 (42%), Gaps = 17/348 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVL------GVRPNESSFGFLAYLYALKGL 271
P++++C L+G C + +++ +E ++ G P+ S+ + + +G
Sbjct: 156 PDVFSCTILLKGLC----DENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGD 211
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
K M + S +V YSS+I+ K ++ A + + G M
Sbjct: 212 SGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNC----R 267
Query: 332 TYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
TY ++ G+ +G K + + + +EP G+ D + ++ G H+
Sbjct: 268 TYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHA 327
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+LD M G VY + AY K+ + EA + + GL D Y A+I
Sbjct: 328 LLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILC 387
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKT 509
S + A F M + + Y +++ GL ++ E + E++ D + + T
Sbjct: 388 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML-DRGICLNT 446
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+NSII + CK GR+ ++++ M+ + +P+ TY +LI+GY A
Sbjct: 447 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 494
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 143/335 (42%), Gaps = 28/335 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQE 273
+ P+ Y N + C Y Q V +A V M G+ P+ ++G + + G +++
Sbjct: 337 IHPDHYVYNILI--CAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVED 394
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETY 333
++ E +++E G S + Y+SLI G E A IL L G + F +
Sbjct: 395 AMLYFEQMIDE-GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF----F 449
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
++ + G V IE++KL G+ D +I G D+A
Sbjct: 450 NSIIDSHCKEGRV-------IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMK 502
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+L M + G Y + YCK R +A L ++ SSG+ D+ Y+ +++
Sbjct: 503 LLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLF 562
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH-RPELMAAFLDEVVEDPRVEVK 508
++ +A L+ + E+ +Y I+ GL +N + + F + + D ++E +
Sbjct: 563 QTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEAR 622
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
T +N +I A K GR +AK +F+ F N
Sbjct: 623 T--FNIMIDALLKVGRNGEAKD-----LFVAFSSN 650
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 138/344 (40%), Gaps = 19/344 (5%)
Query: 214 DFMKPNIYACNAALEGCCYGLQ-SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
D ++P+I L+G Y + ++ +++ M G+ P+ + L YA +G
Sbjct: 300 DGLEPDIATYCTLLQG--YATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKV 357
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA----SRTILLCLGGGNMEQSDF 328
++ + + S M + G + V Y ++I K G +E A + I L GN+
Sbjct: 358 DEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI----- 412
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
Y ++ G + LI+E + GI ++ II + G ++
Sbjct: 413 ---VYNSLIHGLCTCNKWERAEELILE---MLDRGICLNTIFFNSIIDSHCKEGRVIESE 466
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+ D M G + Y + YC + EA +L+ + S GL+ + Y LI
Sbjct: 467 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGY 526
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
A LF++M + + +Y I+ GL + R + E +++
Sbjct: 527 CKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG-TQIE 585
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+N I+H CK +DA R + + + + +T+ +I+
Sbjct: 586 LSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMID 629
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 89/235 (37%), Gaps = 11/235 (4%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+Y V+ GF + G+ + E S VV S II+A DKA +L
Sbjct: 198 SYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYS---SIIAALCKGQAMDKAMEVL 254
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS-----SGLQLDVGNYDALIE 446
M G Y + YC + EA + + S GL+ D+ Y L++
Sbjct: 255 TSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQ 314
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRV 505
T +L M I+ Y ++ + + E M F +
Sbjct: 315 GYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNP 374
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
+ T + ++I CK+GR+EDA +MI P + Y SLI+G T ++
Sbjct: 375 DAVT--YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 427
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 7/191 (3%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD-ISSS 432
+I C D + L + G V + P LK C + RT++A +V+ ++
Sbjct: 93 LIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR----IYDLKGSYLTIMTGLMENHR 488
DV + L++ Q A L M + R D+ SY T++ G +
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVV-SYTTVINGFFKEGD 211
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
+ E++ D R+ ++SII A CK ++ A L M+ PN +TY
Sbjct: 212 SGKAYSTYHEML-DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYT 270
Query: 549 SLINGYVTAEQ 559
S+++GY ++ Q
Sbjct: 271 SIMHGYCSSGQ 281
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 11/232 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V ++EK+ + M +GV+P+ ++ L Y L G ++ ++L S M G V Y +
Sbjct: 462 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRT 521
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
LI+GY K+ + A +L ME S S + TY +++G Q L +
Sbjct: 522 LINGYCKISRMGDA--LVLF----KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 575
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
++ SG ++ S I+ L+D A + + + + + A
Sbjct: 576 ---RITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALL 632
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
K R EA L + SS+GL + Y + E I + LF M +
Sbjct: 633 KVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 684
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 137/320 (42%), Gaps = 11/320 (3%)
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+ +A K+++ M G+RP+ ++ + +G+ ++ E S +++ G + + Y+
Sbjct: 231 GIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYN 290
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL--I 353
L+ + G E + + L G + + TY ++ ++G + N+ +
Sbjct: 291 ILLRDLLNEGKWEYGEKLMSDMLVKG----CEPNPITYSTLITALCRDGKIDEAKNVLKV 346
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
++ + L P G D +ISA G D A LD+M + G + Y L +
Sbjct: 347 MKEKALAPDGYSYDP-----LISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASL 401
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK EA + + G + G+Y+ L A +S D A + +M I +
Sbjct: 402 CKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDE 461
Query: 474 GSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y ++++ L + + L ++ E + + +N+++ CK R+ DA L
Sbjct: 462 ITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLA 521
Query: 534 RMIFLQFEPNDQTYLSLING 553
M+ PN+ TY LI G
Sbjct: 522 AMVNEGCLPNETTYTLLIQG 541
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/393 (19%), Positives = 150/393 (38%), Gaps = 51/393 (12%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KP+++A NA + G C V A KV++ M G P+
Sbjct: 143 KPDVFAYNAVISGFCKA-DRVDHASKVLDRMKKRGFEPD--------------------- 180
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+V Y+ LI + G L+ A R + L + + TY +
Sbjct: 181 --------------VVTYNILIGNFCGRGRLDLALRVMDQLLK----DNCKPTVITYTIL 222
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
++ + G + L+ E + G+ DR +++ G+ D+A L ++
Sbjct: 223 IEATITQGGIDEAMKLLDE---MLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISK 279
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
GC G+ Y L+ E + +L+ D+ G + + Y LI A
Sbjct: 280 NGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDE 339
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A ++ + M+E + SY +++ L + +L FLD+++ + +NSI+
Sbjct: 340 AKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLP-DILSYNSIL 398
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+ CK G ++A ++ + PN +Y +L ++ L M E+
Sbjct: 399 ASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEML----- 453
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVV 609
GI + ++ + L + G D ++++
Sbjct: 454 --SNGIDPDEITYNSLISCLCRDGLVDQAIELL 484
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 123/281 (43%), Gaps = 13/281 (4%)
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
EK +++ ++ + G + Y+++ISG+ K ++ AS+ + M++ F +
Sbjct: 129 EKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVL------DRMKKRGFEPDV 181
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY ++ F G + ++ + K V+ ++ +I A + G D+A +
Sbjct: 182 VTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTI---LIEATITQGGIDEAMKL 238
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
LDEM + G Y + CKE A + + IS +G V Y+ L+ +
Sbjct: 239 LDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLN 298
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
++ L DM +Y T++T L + + + L +V+++ + +
Sbjct: 299 EGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVL-KVMKEKALAPDGY 357
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
++ +I A C+ G+++ A L MI P+ +Y S++
Sbjct: 358 SYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSIL 398
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 151/374 (40%), Gaps = 31/374 (8%)
Query: 217 KPNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
KP+I + + L G S ++D + M G+ PN+ F L YA G+ +K
Sbjct: 220 KPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKA 279
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------------SRTILLCLGGG 321
+ + M G V ++++IS ++G L+ A S + CL G
Sbjct: 280 MLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG 339
Query: 322 NMEQSDF--SKETYCEVVKGFLQNGNVKGLANLI---IEAQKLEPSGIVVDRSVGFG--- 373
+ +KE E++ + VK +++I + ++ ++D V G
Sbjct: 340 CCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP 399
Query: 374 -------IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
++ +G ++A ++LD M + G +Y + YCK R +A +
Sbjct: 400 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 459
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
D+ G++ Y ++ ++ +A +F +M E+ +Y ++ GL N
Sbjct: 460 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRN 519
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ + L+++ V+ +N +I A K GR ++AK + PN QT
Sbjct: 520 NCTDEANMLLEKLFA-MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQT 578
Query: 547 YLSLINGYVTAEQY 560
Y +I + E Y
Sbjct: 579 YSMMITNLIKEESY 592
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 162/395 (41%), Gaps = 30/395 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+++ + ++G C +++ AE+V+E M G RPN ++ L + Y++ G+ +
Sbjct: 114 IAPDLFTYSLIIDGLCKS-KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 172
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL--LCLGGGNMEQSDFSK--E 331
V + M+ G + +S I K G A + I + L G + +S
Sbjct: 173 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA-KCIFDSMVLKGPKPDIISYSTMLH 231
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
Y L +V + NL++ GI ++ V +I+A G+ DKA I
Sbjct: 232 GYATATDSCL--ADVHNIFNLMLT------KGIAPNKHVFNILINAYARCGMMDKAMLIF 283
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++M G + + + C+ R +A + G+ Y LI+
Sbjct: 284 EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNH 343
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYL-TIMTGLMENHRPELMAAFLDEVVE-DPRVEVKT 509
+ A L +M I Y +I+ L + R +D +V+ R V T
Sbjct: 344 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 403
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+NS++ +C G +E+A L M + EPN Y +L++GY + L ++ +
Sbjct: 404 --FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 461
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDA 604
+ KG+K + LY+++ G F A
Sbjct: 462 ML-------HKGVK-----PTSVLYSIILHGLFQA 484
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 12/256 (4%)
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
+ +I V G DKAH + EM G + + +K CK +A +V +
Sbjct: 52 YSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVD 111
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-MENHRPE 490
SG+ D+ Y +I+ S+ A + M EA +Y +++ G + E
Sbjct: 112 SGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNE 171
Query: 491 LMAAF--LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
+ F + P V+ + NS IHA K GR +AK M+ +P+ +Y
Sbjct: 172 SVRVFKQMSSCGVIPTVD----NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYS 227
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQV 608
++++GY TA S L H I + T KGI ++ + + A + G D M +
Sbjct: 228 TMLHGYATATD--SCLADVHNIFNLMLT---KGIAPNKHVFNILINAYARCGMMDKAMLI 282
Query: 609 VEKSQEMKVFVDKWKY 624
E Q + D +
Sbjct: 283 FEDMQNKGMIPDTVTF 298
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 171/475 (36%), Gaps = 87/475 (18%)
Query: 57 QQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL 116
+Q + T+ N + + +H ++ +E+ + FK +++ + P+ NS I L
Sbjct: 142 EQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKH 201
Query: 117 QDNHNLKRAFASVVYVIEKNPKLLDFQT---------------VHTLLGSMRNANTAAPA 161
+ K F S+V K P ++ + T VH + M A
Sbjct: 202 GRTNEAKCIFDSMVLKGPK-PDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNK 260
Query: 162 F-------ALVKCMFKNRYFMPFELWGGFLVDICRKN--SNFVAFLKVFEECCRIA-LDE 211
A +C ++ + FE D+ K + V F V CRI LD+
Sbjct: 261 HVFNILINAYARCGMMDKAMLIFE-------DMQNKGMIPDTVTFATVISSLCRIGRLDD 313
Query: 212 NL-------DFMKP---NIYACNAALEGCCY----------------------GLQ---- 235
L D P +Y C ++GCC G++
Sbjct: 314 ALHKFNHMVDIGVPPSEAVYGC--LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 371
Query: 236 ---------SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG 286
V++ + +++ M G RPN +F L Y L G E+ L M G
Sbjct: 372 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 431
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV 346
Y +L+ GY K G ++ A L G S Y ++ G Q
Sbjct: 432 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL----YSIILHGLFQARRT 487
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
+ E +E V + G + C N +D+A+ +L+++ A + +
Sbjct: 488 TAAKKMFHEM--IESGTTVSIHTYGVVLGGLCRN-NCTDEANMLLEKLFAMNVKFDIITF 544
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ A K R EA +L IS+ GL ++ Y +I I + ++ A +LF
Sbjct: 545 NIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 599
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ Y + HR +V + +GL D +Y +LI + + A LF +M E +
Sbjct: 21 IDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGV 79
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+I+ L + + + + ++V D + ++ II CK+ ++ A+
Sbjct: 80 LPKILICNSIIKELCKMKEMDKAESIVQKMV-DSGIAPDLFTYSLIIDGLCKSKAMDKAE 138
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
R L +M+ PN TY SLI+GY S+ MW+E R G+ +
Sbjct: 139 RVLEQMVEAGTRPNSITYNSLIHGY-------SISGMWNESVRVFKQMSSCGVIPTVDNC 191
Query: 590 DAFLYALVKGG 600
++F++AL K G
Sbjct: 192 NSFIHALFKHG 202
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 57/304 (18%)
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC-EVVKGFLQNGNVKGLAN 351
F SLI G+VK G ++ A CL MEQ K C ++K + + +
Sbjct: 50 FSYSLIYGFVKDGEVDKAH-----CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAES 104
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++ QK+ SGI D II DKA +L++M G Y +
Sbjct: 105 IV---QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIH 161
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
Y E+ ++ +SS G+ V N ++ I A A +F M
Sbjct: 162 GYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMV------ 215
Query: 472 LKG------SYLTIMTG--------LMENH--------------------------RPEL 491
LKG SY T++ G L + H R +
Sbjct: 216 LKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGM 275
Query: 492 M--AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
M A + E +++ + T + ++I + C+ GRL+DA M+ + P++ Y
Sbjct: 276 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 335
Query: 550 LING 553
LI G
Sbjct: 336 LIQG 339
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 173/458 (37%), Gaps = 50/458 (10%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+Y+ N + C L V A ++ M LG+ P S+F L +G ++ VEL
Sbjct: 122 NVYSLNVLINCLCR-LNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVEL 180
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS------------------RTIL--LCL 318
+ M G ++ Y+++I+G K GN A TI+ LC
Sbjct: 181 FNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCK 240
Query: 319 GGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIV 365
+ +F E TY +V GF G + L E + + P +
Sbjct: 241 DRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVT 300
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+ ++ G+ +A + + M G + Y + YC + EA ++
Sbjct: 301 LTI-----LVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKV 355
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ G V +Y+ LI S+ A SL +M + +Y T+M GL +
Sbjct: 356 FEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 415
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
RP+ E+ + ++ ++ FCK G L++A + L+ M + EPN
Sbjct: 416 FGRPKEALNIFKEMCSYGLLP-NLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIV 474
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAV 605
+ LI G A + L + E+ K+ D GI+ + L+K G D
Sbjct: 475 HHTILIEGMFIAGK----LEVAKELFSKLFAD---GIRPTIRTYTVMIKGLLKEGLSDEA 527
Query: 606 MQVVEKSQEMKVFVDKWKYK---QAFMENHKKLKVAKL 640
+ K ++ + Y Q F++N +L
Sbjct: 528 YDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 565
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 132/329 (40%), Gaps = 18/329 (5%)
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
S+ DA M + RP+ + FG +A K +V L + M+ FG + + +
Sbjct: 68 SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLANLI 353
LI+ +L +++ A + G M + + T+ ++ G G +K L
Sbjct: 128 VLINCLCRLNHVDFAVSIL------GKMFKLGIHPTASTFNALINGLCNEGKIKEAVELF 181
Query: 354 IEAQKL--EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
E + EP+ I + II+ G + A + +M GC + Y +
Sbjct: 182 NEMVRRGHEPNVISYNT-----IINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIID 236
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
+ CK+ +A + + ++ G+ +V Y+ ++ A LF++M +
Sbjct: 237 SLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMP 296
Query: 472 LKGSYLTIMTGLM-ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+ ++ GL E E F E + + VE +N+++ +C + +AK+
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVF--ETMTEKGVEPNISTYNALMDGYCLQRLMNEAKK 354
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
MI P +Y LING+ + +
Sbjct: 355 VFEIMIRQGCAPGVHSYNILINGFCKSRR 383
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 171/413 (41%), Gaps = 38/413 (9%)
Query: 65 QDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKR 124
+ N+ S T ++ T NT A FK + N P N++I SL + +
Sbjct: 190 EPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTII---DSLCKDRLVND 246
Query: 125 AFASVVYVIEKN--PKLLDFQT-VH--TLLGSMRNANTAAPAFALVKCMFKNRYFMPFEL 179
A + ++++ P + + VH +LG + A L K M R MP +
Sbjct: 247 AMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATR------LFKEMV-GRDVMPDTV 299
Query: 180 WGGFLVD-ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSV- 237
LVD +C++ A L VFE ++ PNI NA ++G C LQ +
Sbjct: 300 TLTILVDGLCKEGMVSEARL-VFETMTEKGVE-------PNISTYNALMDGYC--LQRLM 349
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
++A+KV E M G P S+ L + ++ L + M + V YS+L
Sbjct: 350 NEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 409
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI--IE 355
+ G + G + A G + + TY ++ GF ++G++ L+ ++
Sbjct: 410 MQGLCQFGRPKEALNIFKEMCSYGLLP----NLVTYSILLDGFCKHGHLDEALKLLKSMQ 465
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
+KLEP+ +V ++ +I G + A + ++ A G + Y +K K
Sbjct: 466 EKKLEPN--IVHHTI---LIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLK 520
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
E + EA L + G + +Y+ +I+ + +QD +A L +M R
Sbjct: 521 EGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKR 573
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 148/393 (37%), Gaps = 46/393 (11%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+PN+ + N + G C + S A V + M G +P+ ++ + L +
Sbjct: 190 EPNVISYNTIINGLC-KTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
E S M + G + Y+ ++ G+ LG L A+R +G M + T +
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDT----VTLTIL 304
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
V G + G V A L+ E + G+ + S ++ L ++A + + M
Sbjct: 305 VDGLCKEGMVSE-ARLVFET--MTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIR 361
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA--------- 447
GC+ G+ Y + +CK R EA L+ ++ L D Y L++
Sbjct: 362 QGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKE 421
Query: 448 --------------------SITSQDF------QSAFSLFRDMREARIYDLKGSYLTIMT 481
SI F A L + M+E ++ + ++
Sbjct: 422 ALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIE 481
Query: 482 GLMENHRPELMAAFLDEVVEDP-RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
G+ + E+ ++ D R ++T + +I K G ++A R+M F
Sbjct: 482 GMFIAGKLEVAKELFSKLFADGIRPTIRT--YTVMIKGLLKEGLSDEAYDLFRKMEDDGF 539
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
PN +Y +I G++ + + + + E+ K
Sbjct: 540 LPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGK 572
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 148/353 (41%), Gaps = 46/353 (13%)
Query: 209 LDENLDF--MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
L + ++F +KPN+ CN + C L + A V+ + +G +PN + L
Sbjct: 84 LSQKMEFRGIKPNLVNCNILINSFCQ-LGHIPSAFSVLTKILKMGYKPNTITLNTLIKGL 142
Query: 267 ALKG-LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ 325
L G + +K + L + ++M+ +E
Sbjct: 143 CLNGKIHDKHCIVGKLKDAVDLFNKMI------------------------------LEN 172
Query: 326 SDFSKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSV--GFGIISACVNL 381
+ T+ +V GF + G VK N++ + Q ++P G+V S+ G+ ++
Sbjct: 173 INPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKP-GVVTYNSLMDGYFLVKQV--- 228
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
+KA SI + M G S + Y + +CK EA +L+ ++ + +V Y
Sbjct: 229 ---NKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTY 285
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+LI+ S A L +M + +Y +I+ L +NH+ + A L ++ +
Sbjct: 286 SSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQM-K 344
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ ++ + + +I C++G+LEDA++ ++ N TY +I G+
Sbjct: 345 NQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGF 397
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 129/346 (37%), Gaps = 56/346 (16%)
Query: 217 KPNIYACNAALEGCCYG---------LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
KPN N ++G C + + DA + M + + P+ +F L +
Sbjct: 129 KPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFC 188
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
+G ++ + ++M G +V Y+SL+ GY + + A M Q
Sbjct: 189 KEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIF------NTMAQLG 242
Query: 328 FSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
S + +Y ++ GF + +K + + +++ I+ + +I G
Sbjct: 243 VSPDIQSYSILINGFCK---IKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKIS 299
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
A ++DEM+ G + Y L A CK H+ A L+ + + G+Q ++ Y LI
Sbjct: 300 YALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILI 359
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ S + A +F D+ +KG L + T
Sbjct: 360 KGLCQSGKLEDARKVFEDLL------VKGHNLNVYT------------------------ 389
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+ +I FC G ++A L +M PN +TY +I
Sbjct: 390 ------YTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIII 429
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 72/164 (43%), Gaps = 1/164 (0%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ +CKE R EA ++ + G++ V Y++L++ + A S+F M + +
Sbjct: 184 VDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGV 243
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
SY ++ G + + L E+ ++ ++S+I CK+G++ A
Sbjct: 244 SPDIQSYSILINGFCKIKMMDEAMELLKEM-HHKQIIPNVVTYSSLIDGLCKSGKISYAL 302
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ + M PN TY S+++ Q + + + ++K +
Sbjct: 303 KLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQ 346
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 82/201 (40%), Gaps = 16/201 (7%)
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN---HRP 489
G++ ++ N + LI + SAFS+ + + + T++ GL N H
Sbjct: 92 GIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDK 151
Query: 490 ELMAAFLDEVVED------PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
+ L + V+ + + + ++ FCK GR+++AK L M+ +P
Sbjct: 152 HCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPG 211
Query: 544 DQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFD 603
TY SL++GY +Q ++ K +T Q G+ + + K D
Sbjct: 212 VVTYNSLMDGYFLVKQV-------NKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMD 264
Query: 604 AVMQVVEKSQEMKVFVDKWKY 624
M+++++ ++ + Y
Sbjct: 265 EAMELLKEMHHKQIIPNVVTY 285
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 110/502 (21%), Positives = 198/502 (39%), Gaps = 43/502 (8%)
Query: 87 AWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVH 146
A +F +T PS VT S + H ++D + F + P ++ F T
Sbjct: 130 ALSTFGKITKLGFHPSL-VTFSTLLHGLCVEDRVSEALHFFHQIC----KPNVIAFTT-- 182
Query: 147 TLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD-ICRKNSNFVAF--LKVFEE 203
L+ + A AL+ M ++ P ++ G +VD +C+ A L+ EE
Sbjct: 183 -LMNGLCREGRVVEAVALLDRMVEDG-LQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE 240
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
RI KPN+ +A ++G + +DA+ + M G+ PN ++ +
Sbjct: 241 VSRI---------KPNVVIYSAIIDGL-WKDGRQTDAQNLFSEMQEKGISPNLFTYNCMI 290
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+ G + L M E S +V +S LI+ VK G A L G +
Sbjct: 291 NGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGII 350
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ TY ++ GF + + + S V+ S+ +I
Sbjct: 351 PNTI----TYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSI---LIDGYCGAKR 403
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
D +L EM+ G Y + +C+ A L+ ++ SSG+ +V +
Sbjct: 404 VDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNT 463
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGS------------YLTIMTGLMENHRPEL 491
L++ + + A +F+ M+++++ DL S Y ++ GL+ +
Sbjct: 464 LLDGLCNNGKLKDALEMFKVMQKSKM-DLDASHPFNDVEPDVQTYNILICGLINEGKFSE 522
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+E+ V T +NS+I CK RL++A + M F P+ T+ +LI
Sbjct: 523 AEELYEEMPHRGLVP-DTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLI 581
Query: 552 NGYVTAEQYFSVLMMWHEIKRK 573
NGY + L ++ E+ R+
Sbjct: 582 NGYCKVGRVGDGLEVFCEMGRR 603
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 147/374 (39%), Gaps = 36/374 (9%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN++ N + G C S+A++++ M + P+ +F L +G K
Sbjct: 279 ISPNLFTYNCMINGFCSS-GRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEG---KF 334
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
E E L NE G + Y+S+I G+ K L++A R L M S +
Sbjct: 335 FEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYL------MATKGCSPDV 388
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
T+ ++ G+ V L+ E + G+V + +I LG + A +
Sbjct: 389 ITFSILIDGYCGAKRVDDGMKLLHEMSR---RGLVANTITYTTLIHGFCQLGNLNAALDL 445
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV-------MDISSS----GLQLDVG 439
L EM + G + L C + +A ++ MD+ +S ++ DV
Sbjct: 446 LQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQ 505
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y+ LI I F A L+ +M + +Y +++ GL + R + D +
Sbjct: 506 TYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSM 565
Query: 500 VE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
P V + ++I+ +CK GR+ D M N TY +LI+G+
Sbjct: 566 GSKGFSPDVVT----FTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQ 621
Query: 557 AEQYFSVLMMWHEI 570
L ++ E+
Sbjct: 622 VGNINGALDIFQEM 635
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 130/354 (36%), Gaps = 57/354 (16%)
Query: 218 PNIYACNAALEGCCYGLQSVSDA-EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
PN N+ ++G + Q+ DA E++ M+ G P+ +F L Y + +
Sbjct: 351 PNTITYNSMIDG--FSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGM 408
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+L M+ G + + Y++LI G+ +LGNL +A + + G T +
Sbjct: 409 KLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNV----VTCNTL 464
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-----------IISACVNLGLSD 385
+ G NG +K + QK S + +D S F +I +N G
Sbjct: 465 LDGLCNNGKLKDALEMFKVMQK---SKMDLDASHPFNDVEPDVQTYNILICGLINEGKFS 521
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A + +EM G Y + CK+ R EATQ+ + S G DV + LI
Sbjct: 522 EAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLI 581
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+F +M G++ N
Sbjct: 582 NGYCKVGRVGDGLEVFCEMGR--------------RGIVAN------------------- 608
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+ ++IH FC+ G + A + MI P+ T +++ G + E+
Sbjct: 609 ---AITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 659
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 173/423 (40%), Gaps = 36/423 (8%)
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
F + T LG M + A F ++ K++ F ++ + C N N
Sbjct: 73 FTILFTFLGRMAMPDQALVFFGMLP---KDKQFHSVHVYNTLIT--CLTNCNRYD----- 122
Query: 202 EECCRIALDENLDFMK--PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
+ L NL F + P+ + + G S+ + + + M G+ P+ S F
Sbjct: 123 -----LELYHNLAFYEVFPDSVTFSVLMNSAVKGGGSLKEVWALYQDMVQRGISPSVSVF 177
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
G + G ++ + + + M + +V Y+ LI Y ++G LE A +
Sbjct: 178 GTFIKAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMT---- 233
Query: 320 GGNMEQSDFSKE--TYCEVVKGFLQNGNVKG--LANLIIEAQKLEPSGIVVDRSVGFGII 375
M + TY ++ G+L+ + +A +IE ++E SG+ D ++
Sbjct: 234 --EMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIE--EMEASGLYPDVVTFTMLL 289
Query: 376 SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ 435
A + GL+++A + + M A G Y + AY + +A + I G+
Sbjct: 290 GAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVN 349
Query: 436 LDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
V Y AL++A + D + ++++ M+ + +Y+TI+ + R +
Sbjct: 350 PTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDL 409
Query: 496 LDEVV---EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
++E P + V +N +++++ + GR A L M F P+ TY +LI
Sbjct: 410 IEEFKNQGHKPDLMV----YNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTLIY 465
Query: 553 GYV 555
G++
Sbjct: 466 GFL 468
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 168/418 (40%), Gaps = 71/418 (16%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M + G V ++L++G + G +++A+ L GG + D + ++ G+
Sbjct: 126 MCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA---LADRGGGIHALDVIG--WNTLIAGYC 180
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCS 400
+ G+ ++ A ++ G+ +D VG+ +++ G D A +LD M G
Sbjct: 181 RVGDTPAALSV---ADRMTAQGLPMD-VVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVD 236
Query: 401 VGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSL 460
+ Y P + YC+ EA L + +G+ LDV AL+ F A++L
Sbjct: 237 PNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL 296
Query: 461 FRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE-----VVEDPRVEVKTHDW--- 512
FR+M + +Y T++ L + R + + + L E VV D DW
Sbjct: 297 FREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGK 356
Query: 513 --------------------------NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+I A CKA +++A++ L M PN T
Sbjct: 357 QGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVT 416
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFF---- 602
+ S+ING+V +L E KR + ++GI N+V Y + GFF
Sbjct: 417 FSSVINGFVKR----GLLDKATEYKRMMK---ERGI--NPNVVT---YGTLIDGFFKFQG 464
Query: 603 -DAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAG 659
DA ++V V V+K+ V LR+ N K EA+ FK+ +G
Sbjct: 465 QDAALEVYHDMLCEGVEVNKFIVDSL---------VNGLRQ-NGKIEEAMALFKDASG 512
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 99/508 (19%), Positives = 202/508 (39%), Gaps = 54/508 (10%)
Query: 81 TNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLL 140
T +EA+ ++ + N + ++L+A L + A+A + ++K +
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCR---DGRFSEAYA-LFREMDKVGAVP 307
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
+ T TL+ S+ A +L+ M M + + + ++
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT-----DE 362
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
++ R AL +NL N ++ C +V +AE+V+ M + PN +F
Sbjct: 363 VKDTLRFALSDNLSL---NGVTYTVLIDALCKA-HNVDEAEQVLLEMEEKSISPNVVTFS 418
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCL 318
+ + +GL +K E + +M E G + +V Y +LI G+ K ++A +LC
Sbjct: 419 SVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE 478
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA---------------------- 356
G +E + F ++ +V G QNG ++ L +A
Sbjct: 479 G---VEVNKFIVDS---LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKA 532
Query: 357 ----------QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
Q+L ++ D V I+ LG +A SIL EM G Y
Sbjct: 533 GDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTY 592
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ ++C++ TA+A +L+ ++ S ++ ++ Y+ L+ + + A L +M
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
A ++ ++ ++ R +++ + E + + + +N+++ C G
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILD-IHEWMMNAGLHADITVYNTLLQVLCYHGMTR 711
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGY 554
A L M+ P+ T+ +LI G+
Sbjct: 712 KATVVLEEMLGSGIAPDTITFNALILGH 739
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 145/353 (41%), Gaps = 9/353 (2%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++ +A + G C S+A + M +G PN ++ L A G ++++ L
Sbjct: 273 DVVTLSALVAGLCRD-GRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSL 331
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M G +V Y++L+ K G + T+ L + + TY ++
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALS----DNLSLNGVTYTVLID 387
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
+ NV +++E ++ S VV S +I+ V GL DKA M G
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFS---SVINGFVKRGLLDKATEYKRMMKERG 444
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ + Y + + K A ++ D+ G++++ D+L+ + + A
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
+LF+D + + +Y T++ GL + F E++ D + +N I+
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELM-DRNMLPDAVVYNVFINC 563
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
C G+ ++AK L M + +P+ TY ++I + + L + HE+K
Sbjct: 564 LCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/410 (19%), Positives = 167/410 (40%), Gaps = 35/410 (8%)
Query: 224 NAALEGCCYGLQ-----SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N L G C Q +++D I + V+G + L Y G + +
Sbjct: 139 NTLLAGLCRNGQVDAAAALADRGGGIHALDVIG-------WNTLIAGYCRVGDTPAALSV 191
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M G +V Y++L++G+ + G +++A + + G D + TY +
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG----VDPNVATYTPFIV 247
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
+ + KG+ + + +G+++D +++ G +A+++ EM+ G
Sbjct: 248 YYCRT---KGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG 304
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
Y + + K R E L+ ++ S G+ +D+ Y AL++ Q
Sbjct: 305 AVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDW----LGKQGKT 360
Query: 459 SLFRDMREARIYD---LKG-SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
+D + D L G +Y ++ L + H + L E+ E+ + ++S
Sbjct: 361 DEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEM-EEKSISPNVVTFSS 419
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+I+ F K G L+ A R M PN TY +LI+G+ + + L ++H++
Sbjct: 420 VINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML--- 476
Query: 575 STDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+G++ +VD+ + L + G + M + + + + +D Y
Sbjct: 477 ----CEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 139/365 (38%), Gaps = 47/365 (12%)
Query: 209 LDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL 268
+D N M P+ N + C L +A+ ++ M +G++P++S++ + +
Sbjct: 546 MDRN---MLPDAVVYNVFINCLCI-LGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCR 601
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
KG K ++L M ++ Y++L++G G +E A
Sbjct: 602 KGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA------------------ 643
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
K L N ++ A PS + R ++ AC D
Sbjct: 644 ------------------KYLLNEMVSA-GFSPSSLTHRR-----VLQACSQSRRLDVIL 679
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
I + M G + VY L+ C T +AT ++ ++ SG+ D ++ALI
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
S +AF+ + M I ++ T++ GL R L E +E +E
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE-MEKSGLEPN 798
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
++ ++ K +A R M+ F P TY +LI+ + A ++
Sbjct: 799 NLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFK 858
Query: 569 EIKRK 573
+++++
Sbjct: 859 DMQKR 863
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 165/428 (38%), Gaps = 67/428 (15%)
Query: 208 ALDENLDFMKPNIYACNAALEGCCYGLQ-------SVSDAEKVIETMSVLGVRPNESSFG 260
A+++ L M+ N+ + LEG G+ V +A V E M P+ S+
Sbjct: 58 AMEDVLAEMRKNVDS--KMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYN 115
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
+ + G + ++ M + G + ++ + + G +A R + G
Sbjct: 116 AIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQ 175
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA----QKLEPSGIVVDRSVGFGIIS 376
G +F+ +YC V+ GF + N IEA ++ GI D +I
Sbjct: 176 G----CEFNAVSYCAVISGFYKE-------NCQIEAYHLFDEMLKQGICPDILTFNKLIH 224
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
G ++ + ++ G L + ++ C++ EA +L+ I S GL
Sbjct: 225 VLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTP 284
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
DV +Y+ LI F + EA Y L
Sbjct: 285 DVISYNTLI----------CGFCKHSKLVEAECY-------------------------L 309
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVT 556
++V + VE +N+II+ FCKAG +++A + LR +F F P++ TY SLING
Sbjct: 310 HKMV-NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368
Query: 557 AEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMK 616
+ +++E +KG K L + + L K G +Q+++ E
Sbjct: 369 DGDMNRAMAVFYEAM-------EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHG 421
Query: 617 VFVDKWKY 624
D W Y
Sbjct: 422 CSPDIWTY 429
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 159/363 (43%), Gaps = 14/363 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQEKIV 276
P+I N + C +V ++EK+ + GV PN +F KG + E
Sbjct: 214 PDILTFNKLIHVLCKK-GNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAAR 272
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
LES+++E G + ++ Y++LI G+ K L A + + G +E ++F TY +
Sbjct: 273 LLESIVSE-GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG-VEPNEF---TYNTI 327
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ GF + G ++ ++ +A G + D +I+ N G ++A ++ E
Sbjct: 328 INGFCKAGMMQNADKILRDAM---FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + +Y +K K+ +A QL+ D+ G D+ Y+ ++
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444
Query: 457 AFSLFRD-MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A + D + + I D+ ++ T++ G + + LD ++ + +N++
Sbjct: 445 ANGILNDAIAKGCIPDI-FTFNTLIDGYCKQRNMDKAIEILDTMLSHG-ITPDVITYNTL 502
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK-RKI 574
++ CKA +L++ T + M+ PN TY LI + + + ++ E+K R +
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562
Query: 575 STD 577
+ D
Sbjct: 563 TPD 565
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 137/341 (40%), Gaps = 12/341 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN + N + G C + +A+K++ G P+E ++ L G +
Sbjct: 317 VEPNEFTYNTIINGFCKA-GMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ + E GF ++ Y++L+ G K G + A + + +M + S + TY
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLM------KDMMEHGCSPDIWTY 429
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
VV G + G + ++ +A G + D +I DKA ILD
Sbjct: 430 NLVVNGLCKMGCLSDANGILNDAI---AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + G + + Y L CK + + G ++ Y+ LIE+ +
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A LF++M+ + + T++ GL N + + ++ + T +N
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFN 606
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+I+AFC + A++ +M P++ TY +I+ Y
Sbjct: 607 IMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSY 647
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 163/403 (40%), Gaps = 35/403 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+ ++ + C +++ AE + M GV PN ++ L Y Y+ G ++
Sbjct: 250 IPPDFVTYSSVVHALCKA-RAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEA 308
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V + M +V ++ L+ K G ++ A R + + FS Y
Sbjct: 309 VRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEA-RDVFDTMAMKGQNPDVFS---YNI 364
Query: 336 VVKGFLQNGNVKGLANL--IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G+ G + + +L ++ + P ++ +V +I A N G+ DKA I +E
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAP--VICTFNV---LIKAYANCGMLDKAMIIFNE 419
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G + Y + A C+ + +A + + G+ D Y LI+ T
Sbjct: 420 MRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMT-GLMENHRPELMAAFLDEVVEDPRVEVKTHD- 511
A L ++ G +L I+ + N+ +L + + D V V H
Sbjct: 480 LLKAKELISEIMN------NGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPT 533
Query: 512 ---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
++ ++ +C G++E A R M+ EPND Y +L+NGY + L ++
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593
Query: 569 EIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
E+ QKGIK LY ++ G F+A V K
Sbjct: 594 EML-------QKGIK-----PSTILYNIIIDGLFEAGRTVPAK 624
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/404 (18%), Positives = 152/404 (37%), Gaps = 53/404 (13%)
Query: 218 PNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P++ N + C YG + +A V +TM++ G P+ S+ + YA KG +
Sbjct: 322 PDVVTFNMLMGSLCKYG--KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 379
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+L LM G + + ++ LI Y G L+ A
Sbjct: 380 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKA-------------------------- 413
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+I ++ G+ + +I+A +G D A ++M
Sbjct: 414 ----------------MIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMID 457
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G + Y ++ +C +A +L+ +I ++G+ LD+ + ++I
Sbjct: 458 QGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMD 517
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A ++F ++ Y +M G + E D +V +E + +++
Sbjct: 518 AQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS-AGIEPNDVVYGTLV 576
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+ +CK GR+++ R M+ +P+ Y +I+G A + + +HE+
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT----- 631
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
+ GI L L K FD + + ++ + M V +D
Sbjct: 632 --ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 673
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 162/456 (35%), Gaps = 70/456 (15%)
Query: 81 TNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLL 140
T EA + FK + S+ P N L+ L + F ++ + +NP +
Sbjct: 302 TGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMA-MKGQNPDVF 360
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
+ N +A C+ L G IC F +K
Sbjct: 361 SY-------------NIMLNGYATKGCLVDMTDLFDLMLGDGIAPVIC----TFNVLIKA 403
Query: 201 FEEC-----CRIALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRP 254
+ C I +E D +KPN+ + C + + DA + M GV P
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCR-IGKMDDAMEKFNQMIDQGVAP 462
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
++ ++ L + G K EL S + G +V +SS+I+ KLG + A
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIF 522
Query: 315 LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV-GFG 373
L + G L P+ +V + G+
Sbjct: 523 DLTVNVG-------------------------------------LHPTAVVYSMLMDGYC 545
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++ G +KA + D M + G VY + YCK R E L ++ G
Sbjct: 546 LV------GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ Y+ +I+ + A F +M E+ I K +Y ++ GL +N R A
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKN-RCFDEA 658
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
FL + + V++ N++I + R+E+AK
Sbjct: 659 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 694
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 410 LKAYCKEHRTAEATQLVMDISSS-GLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE-- 466
LK +C+ RT EA +++ + G DV +Y L+++ A L R M E
Sbjct: 153 LKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGG 212
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
A +Y T++ G + E+V+ + ++S++HA CKA ++
Sbjct: 213 AVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG-IPPDFVTYSSVVHALCKARAMD 271
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
A+ LR+M+ PN+ TY +LI GY + Q+ + ++ E++R+
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQ 318
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 88/236 (37%), Gaps = 11/236 (4%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
L V DA+ + + +G+ P + L Y L G EK + + M G V
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLAN 351
Y +L++GY K+G ++ M Q T Y ++ G + G
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLF------REMLQKGIKPSTILYNIIIDGLFEAGRT---VP 622
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++ ++ SGI +++ ++ D+A + E+ A + + +
Sbjct: 623 AKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIA 682
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ R EA L IS SGL V Y +I I + A +F M+ A
Sbjct: 683 GMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
>gi|473874|gb|AAA17740.1| a membrane-associated salt-inducible protein [Nicotiana tabacum]
Length = 435
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 10/258 (3%)
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGN 345
G +V Y+++I + +GN++ A R + E+ + T+ ++ F + G
Sbjct: 26 GLKPDVVLYNNIIRAFCGMGNMDRALRIV----EQMKKERHRPTSRTFMPIIHAFAKAGA 81
Query: 346 VKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGV 405
++ ++ + SG + +I V DKA ++DEM G
Sbjct: 82 IRKALDVF---DMMRRSGCIPTVQTYNALILGLVEKRQMDKAVEVVDEMLLAGIRPNERT 138
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + Y T +A + I GL+LDV Y+AL++A S +SA ++ ++M
Sbjct: 139 YTTIMDGYASLGDTGKAFEYFSRIKDEGLELDVYTYEALLKACCKSGRIESALAVTKEMN 198
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELM-AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
I Y ++ G R ++ AA L + + V+ H + S ++A CKAG
Sbjct: 199 AKNIPRNTFVYNILIDGWA--RRSDVWEAADLMQQMRQEGVQPDIHTYTSFVNACCKAGD 256
Query: 525 LEDAKRTLRRMIFLQFEP 542
++ A T++ M + P
Sbjct: 257 MQKAMNTIQEMKRVGLNP 274
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 113/267 (42%), Gaps = 15/267 (5%)
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
+FE+ R D +KP++ N + C G+ ++ A +++E M RP +F
Sbjct: 18 IFEDVIR-------DGLKPDVVLYNNIIRAFC-GMGNMDRALRIVEQMKKERHRPTSRTF 69
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
+ + +A G K +++ +M G + Y++LI G V+ ++ A + L
Sbjct: 70 MPIIHAFAKAGAIRKALDVFDMMRRSGCIPTVQTYNALILGLVEKRQMDKAVEVVDEMLL 129
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
G ++ TY ++ G+ G+ +++ G+ +D ++ AC
Sbjct: 130 AGIRP----NERTYTTIMDGYASLGDTGKAFEYF---SRIKDEGLELDVYTYEALLKACC 182
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
G + A ++ EMNA VY + + + EA L+ + G+Q D+
Sbjct: 183 KSGRIESALAVTKEMNAKNIPRNTFVYNILIDGWARRSDVWEAADLMQQMRQEGVQPDIH 242
Query: 440 NYDALIEASITSQDFQSAFSLFRDMRE 466
Y + + A + D Q A + ++M+
Sbjct: 243 TYTSFVNACCKAGDMQKAMNTIQEMKR 269
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 116/281 (41%), Gaps = 14/281 (4%)
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ GF+ +K AN + + G+ D + II A +G D+A I+++M
Sbjct: 2 LINGFIY---LKDWANAFAIFEDVIRDGLKPDVVLYNNIIRAFCGMGNMDRALRIVEQMK 58
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
++P + A+ K +A + + SG V Y+ALI + +
Sbjct: 59 KERHRPTSRTFMPIIHAFAKAGAIRKALDVFDMMRRSGCIPTVQTYNALILGLVEKRQMD 118
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A + +M A I + +Y TIM G + + +D +E+ + + ++
Sbjct: 119 KAVEVVDEMLLAGIRPNERTYTTIMDGYASLGDTGKAFEYFSRI-KDEGLELDVYTYEAL 177
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
+ A CK+GR+E A + M N Y LI+G+ + + +++
Sbjct: 178 LKACCKSGRIESALAVTKEMNAKNIPRNTFVYNILIDGWARRSDVWEAADLMQQMR---- 233
Query: 576 TDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMK 616
Q+G++ + + +F+ A K G M + QEMK
Sbjct: 234 ---QEGVQPDIHTYTSFVNACCKAGDMQKAMNTI---QEMK 268
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 117/577 (20%), Positives = 228/577 (39%), Gaps = 85/577 (14%)
Query: 57 QQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL 116
+ Q+ T+D + ++ KS + N EA F+ + +F KP S A L++
Sbjct: 70 KTQKCKCTEDVVLTVLKAYAKSKMPN---EALDCFQKM--EEIFGCKPGIRSYNALLNAF 124
Query: 117 QDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMP 176
+ + L++A + + Y E L + QT + L+ A L+ M+ ++ P
Sbjct: 125 IEANLLEKAESFLAY-FETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMW-SKDLKP 182
Query: 177 FELWGGFLVDICRKNSNFVAFLKVFEE-----------CCRIALD---ENLDFMK----- 217
G +++ K+ + V+ L+VF+E C I +D + D+++
Sbjct: 183 DVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIW 242
Query: 218 ----------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
PN+ N + G C + ++ ++ E M + NE Y
Sbjct: 243 ERLVKGSCVYPNVVTYNVMINGLC-KMGRFDESLEMWERM-----KKNECEMDLFTYSSL 296
Query: 268 LKGL-----QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ GL + VE+ M + +V Y++L++G+ + G ++ S + + +G N
Sbjct: 297 ICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKE-SFELWVMMGKEN 355
Query: 323 MEQ-------------------------------SDFSKETYCEVVKGFLQNGNVKGLAN 351
S TY ++ G +NG++
Sbjct: 356 CHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALK 415
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++ EA+ G +D I+ G D+A I+ +M+ GC + V P +
Sbjct: 416 ILKEAKD---GGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLIN 472
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
+ + + EA ++ + G V +Y+ LI ++ F A+S ++M E
Sbjct: 473 GFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKP 532
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKR 530
+Y +M GL + + ++ +V V+ +V H N ++H C AG++EDA
Sbjct: 533 DMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMH--NILMHGLCSAGKIEDALL 590
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
M PN T+ +L++G A + ++W
Sbjct: 591 LYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIW 627
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 162/411 (39%), Gaps = 34/411 (8%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P + N+ + G C + V +A +E M G P+ ++ L + + +E
Sbjct: 142 PTVVTYNSIITGFCRA-RRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLE 200
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
L + GF+ +V YS++I G K G L A E+ + TY
Sbjct: 201 LLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF---------EEMSCAPTAITYNS 251
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ + G++ L+ K+ D ++SA +G D A+ + +M
Sbjct: 252 LIGGYCRAGDMDEAIRLL---GKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMV 308
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
A S + + + C E R +A +L+ +I+ G + Y+ +++ + +
Sbjct: 309 ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVR 368
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVEVKTHDWNS 514
A L D R +Y ++ G R + +LD++ E +
Sbjct: 369 KAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI 428
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
I+ A C+ GR +DA + MI + P T+ +++ A Q HE+ ++
Sbjct: 429 ILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQ----PQQAHELLEEM 484
Query: 575 STDGQKGIKFEH----NLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
IK+ H DA + A + G + + E + E++++ DK
Sbjct: 485 -------IKYGHTPGPGTCDAVVSAYCRAGM---IQKADELASELRLYTDK 525
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 134/339 (39%), Gaps = 46/339 (13%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
+ + DA +V++ M P+ ++ + L + EL M G ++ + Y
Sbjct: 53 RRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITY 112
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLII 354
S+L+ G K L+ A + ET E +G A ++
Sbjct: 113 SALVDGLCKCERLDEAVALV----------------ETMAE-----------RGCAPTVV 145
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
+ +G R V D+AH +++M A GC + Y + +C
Sbjct: 146 TYNSI-ITGFCRARRV--------------DEAHGFMEQMVAEGCHPDIITYTALIGGFC 190
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
K +L+ +++ G D+ Y +I+ + + A +F +M A
Sbjct: 191 KSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAI 247
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+Y +++ G + L ++V+D + + +++ AFCK GRL+DA ++
Sbjct: 248 TYNSLIGGYCRAGDMDEAIRLLGKMVDD-KCAPDVVTYTTLMSAFCKMGRLDDAYELFQQ 306
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
M+ + P+ T+ SL++G + L + EI R+
Sbjct: 307 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 345
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 134/333 (40%), Gaps = 24/333 (7%)
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA-YLYALKGLQEKIVELESLMNEFGFSS 289
C G V DA +++E M G+ N ++ L L + L E + +E+ M E G +
Sbjct: 85 CLG-DRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVET-MAERGCAP 142
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQ-----SDFSKETYCEVVKGFLQNG 344
+V Y+S+I+G+ + ++ A G MEQ TY ++ GF ++
Sbjct: 143 TVVTYNSIITGFCRARRVDEAH---------GFMEQMVAEGCHPDIITYTALIGGFCKSR 193
Query: 345 NVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
+V L+ E + G D +I G A I +EM+ C+
Sbjct: 194 DVGRGLELLGEVTR---RGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAI 247
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y + YC+ EA +L+ + DV Y L+ A A+ LF+ M
Sbjct: 248 TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQM 307
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
++ ++ +++ GL R E L+E+ + +N ++ +CKA +
Sbjct: 308 VANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG-CPPTIYTYNCVVDGYCKANQ 366
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+ A+ + F PN TY L+ G A
Sbjct: 367 VRKAEELVADFRSRGFVPNTVTYNILVAGCCRA 399
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 8/252 (3%)
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
+I CV G+ D+A +L + CG + + + + + A + + +
Sbjct: 154 ALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAF 213
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GL + Y I+ + A +FRDM E+ + SY T + GL + R +L
Sbjct: 214 GLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLG 273
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
L +V+ + ++ + + +I FC +L++A+ LR M F P+ Y +LI+
Sbjct: 274 FKVLQDVI-NAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALIS 332
Query: 553 GYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
GY L + E+ KG+K ++ + L L + G V ++
Sbjct: 333 GYCMVGNLLKALALHDEMV-------SKGVKTNCVILSSILQGLSQMGMASEVANQFKEF 385
Query: 613 QEMKVFVDKWKY 624
++M +F D+ Y
Sbjct: 386 KKMGIFFDEACY 397
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 148/360 (41%), Gaps = 45/360 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL------- 268
+ PN Y A++G C ++++A V M GV PN SF + ++ L
Sbjct: 215 LNPNDYTYTIAIKGFCRK-GNLAEAIDVFRDMEESGVTPN--SFSYTTFIEGLCLHGRSD 271
Query: 269 ---KGLQEKIVELESLMNEFGFSSQMVFYSSLISGY---VKLGNLESASRTILLCLGGGN 322
K LQ+ ++ + M+ F Y+ +I G+ +KL ES R
Sbjct: 272 LGFKVLQD-VINAKIPMDVFA-------YTVVIRGFCSEMKLKEAESILR---------E 314
Query: 323 MEQSDFSKETY--CEVVKGFLQNGNV-KGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
ME+ F+ + Y C ++ G+ GN+ K LA ++ G+ + + I+
Sbjct: 315 MEKQGFAPDVYVYCALISGYCMVGNLLKALA----LHDEMVSKGVKTNCVILSSILQGLS 370
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
+G++ + + E G Y + A CK + EA +L++++ + D+
Sbjct: 371 QMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDII 430
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
NY +I A +++R+M++ +Y + G N + + L+
Sbjct: 431 NYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLN-Y 489
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+E V+ T N II C G+++DA+ + E + Y +++NGY A
Sbjct: 490 METQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNL----EEKCLENYSAMVNGYCEANH 545
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 151/373 (40%), Gaps = 28/373 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
M P+I + G Y L+ V DA + M +G +P+ ++ LA ++ GL ++
Sbjct: 425 MVPDIINYTTVISG--YFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQE 482
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+ L + M G V ++ +I G G ++ A N+E+ E Y
Sbjct: 483 ALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFF------DNLEEKCL--ENYS 534
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
+V G+ + +V L+I +L G ++ ++ F ++ + G S+KA +L+ M
Sbjct: 535 AMVNGYCEANHVNKAFALLI---RLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETM 591
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
A + + +Y + A + +A + + GL DV Y +I
Sbjct: 592 VALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKM 651
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGL----MENHRPELMAAFLDEVVEDPRV---EV 507
+ A+ + DM+ I +Y ++ + + L A E + DP E+
Sbjct: 652 KEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEM 711
Query: 508 KTHD-------WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
K D + +I CK ++DA MI P+ TY +L++GY
Sbjct: 712 KDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNI 771
Query: 561 FSVLMMWHEIKRK 573
++++ E+ K
Sbjct: 772 KKAVVLFDEMLNK 784
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 108/280 (38%), Gaps = 36/280 (12%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
TY +KGF + GN LA I + +E SG+ + I G SD +L
Sbjct: 221 TYTIAIKGFCRKGN---LAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVL 277
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++ + + Y ++ +C E + EA ++ ++ G DV Y ALI
Sbjct: 278 QDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMV 337
Query: 452 QDFQSAFSLFRDMREARIYD--------LKGSYLTIMTGLMENHRPEL--MAAFLDEVVE 501
+ A +L +M + L+G M + N E M F DE
Sbjct: 338 GNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEAC- 396
Query: 502 DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
+N ++ A CK G++E+A L M + P+ Y ++I+GY +
Sbjct: 397 ----------YNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVV 446
Query: 562 SVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
L ++ E+K G K D Y ++ GGF
Sbjct: 447 DALNIYREMKDI----GHKP--------DIVTYNVLAGGF 474
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 150/368 (40%), Gaps = 55/368 (14%)
Query: 216 MKPNIYACNAALEG-CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
M P + + + + G CC G +A+++ M GV+PN +F L + +G +
Sbjct: 273 MTPTVISYTSLIHGFCCGG--KWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIE 330
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+L +M + G ++ Y+SLI G+ +G+L SA + +M + C
Sbjct: 331 AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV------SMPSKGCEPDVIC 384
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV----DRSVGFGIISACVNLGLSDKAHSI 390
V L NG K + + EA KL + V D +++ G A +
Sbjct: 385 YTV---LINGYCK--TSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 439
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
M G L +Y L CK EA +L + S ++LD+ ++ LI+
Sbjct: 440 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 499
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ ++A+ LF + + E +P+++
Sbjct: 500 AGKLETAWELFEKLPQ------------------EELQPDVVT----------------- 524
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH-E 569
+N +IH FC+ G++ A ++M P+ TY +LI G+ +++ V+ + H
Sbjct: 525 -YNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 583
Query: 570 IKRKISTD 577
++R +S D
Sbjct: 584 VQRDVSLD 591
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM- 464
Y +K C EHR ++A L + G + Y L++ + + A L ++M
Sbjct: 169 YTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEML 228
Query: 465 REARIYDLKG-----SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH---DWNSII 516
++ +Y + SY I+ L ++ R + +E+ +V+ T + S+I
Sbjct: 229 NDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEM----KVQGMTPTVISYTSLI 284
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
H FC G+ E+AKR M+ +PN T+ LI+
Sbjct: 285 HGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLID 320
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 7/175 (4%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL----VMDISSSGLQLD--VG 439
KA + M GC+ Y +K C+ + A +L + D S G+ V
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
+Y +I+A + A LF +M+ + SY +++ G + E +E+
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303
Query: 500 VEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
V + V+ +N +I CK G++ +AK L MI PN TY SLI G+
Sbjct: 304 V-NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGF 357
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 3/189 (1%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A DEM A G L Y +K +CK +T A L+ + +G + D+ Y+ +I
Sbjct: 172 RAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTII 231
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-DPR 504
+ + A +F +++ + +Y +M GL + + E +A +E++ +
Sbjct: 232 DGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIM 291
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+V T +N ++ CK G L +A+ ++ MI EPN TY SL+NGY + F
Sbjct: 292 PDVVT--FNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEAR 349
Query: 565 MMWHEIKRK 573
M++ + K
Sbjct: 350 MVFDAMITK 358
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 132/333 (39%), Gaps = 19/333 (5%)
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN 343
+ GF V +SSLI+G A + G + TY ++KGF +
Sbjct: 147 KLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQP----NLHTYNTIIKGFCKI 202
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
G L+ +K++ +G D + II L +A I E+ G +
Sbjct: 203 GKTTVAVGLL---KKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDV 259
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y + C + EA+ L ++ S + DV ++ L++ A + +
Sbjct: 260 FTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKI 319
Query: 464 MREARIYDLKGSYLTIMTG-LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKA 522
M E + +Y ++M G ++N E F + + V + +N +I+ +CKA
Sbjct: 320 MIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVS--YNILINGYCKA 377
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQ-KG 581
R+++A+ M F PN Y +LI+G A + H R++ D Q +G
Sbjct: 378 QRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGR--------HCEARELFKDMQAQG 429
Query: 582 IKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+ L +L K G+ D +++ Q+
Sbjct: 430 CSPDLVTCTILLDSLCKLGYLDNALRLFRAMQD 462
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 136/336 (40%), Gaps = 11/336 (3%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+ ++ + G C+ + A + + M G +PN ++ + + G V
Sbjct: 151 EPDAVTFSSLINGLCFE-DKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAV 209
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
L M++ G +V Y+++I G K L S + I + G + F TY +
Sbjct: 210 GLLKKMDKAGGRPDIVIYNTIIDGLCK-DRLVSEALDIFSEIKGKGVRPDVF---TYSIL 265
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ G + + + L E L VV ++ ++ G+ +A I+ M
Sbjct: 266 MHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI---LVDKLCKEGMLSEAQGIIKIMIE 322
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G Y + YC +++ EA + + + G +V +Y+ LI +Q
Sbjct: 323 KGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDE 382
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRP-ELMAAFLDEVVEDPRVEVKTHDWNSI 515
A LF +M + +Y T+++GL + R E F D + ++ T +
Sbjct: 383 ARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVT--CTIL 440
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
+ + CK G L++A R R M +PN TY LI
Sbjct: 441 LDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILI 476
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 116/289 (40%), Gaps = 30/289 (10%)
Query: 191 NSNFVAFLKVFEECCRIALDENLDFM--KPNIYACNAALEGCCYGLQSVSDAEKVIETMS 248
N+ F K+ + + L + +D +P+I N ++G C + VS+A + +
Sbjct: 193 NTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKD-RLVSEALDIFSEIK 251
Query: 249 VLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLE 308
GVRP+ ++ L + +E+ L + M +V ++ L+ K G L
Sbjct: 252 GKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLS 311
Query: 309 SASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDR 368
A I + + G + + TY ++ G+ L N + EA+ +V D
Sbjct: 312 EAQGIIKIMIEKG----VEPNYATYNSLMNGYC-------LQNKVFEAR------MVFDA 354
Query: 369 SVGFGIISACVNLGL----------SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+ G + V+ + D+A + DEM+ G Y + C+ R
Sbjct: 355 MITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGR 414
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
EA +L D+ + G D+ L+++ +A LFR M+++
Sbjct: 415 HCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDS 463
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 94/236 (39%), Gaps = 16/236 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+++ + + G C Q +A + M L + P+ +F L +G+ +
Sbjct: 255 VRPDVFTYSILMHGLCNSDQK-EEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEA 313
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ +M E G Y+SL++GY + A + G M
Sbjct: 314 QGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNV--------- 364
Query: 336 VVKGFLQNGNVKGLANLIIEAQKL--EPS--GIVVDRSVGFGIISACVNLGLSDKAHSIL 391
V L NG K A I EA++L E S G++ + +IS G +A +
Sbjct: 365 VSYNILINGYCK--AQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELF 422
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+M A GCS L L + CK A +L + S L+ ++ YD LI A
Sbjct: 423 KDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRA 478
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 148/361 (40%), Gaps = 30/361 (8%)
Query: 221 YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
Y A + C +++ A ++ M GV+ + + L Y ++ VE+++
Sbjct: 199 YVYTAGIRAYCES-RNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKN 257
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLGG-----------GNMEQSD 327
+M G ++ V Y +L+ G+ ++ LE A R ++ LG + + +
Sbjct: 258 VMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKE 317
Query: 328 FSKETYCEVVK----GFLQNG-NVKGLANLIIEAQKLEPSGIVVDRSVGFGI-------- 374
+E + K G + N L + + + ++ + + + G G+
Sbjct: 318 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377
Query: 375 --ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
I A G+ + A + D+M G V + Y + YCK+ A L+ +
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GL +Y LI + D S L R+M E I ++ ++ G ++ + +
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
A D+++ D V +N +I +C G + A + +M+ + +P++ TY SLI+
Sbjct: 498 ARLFDKMI-DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 556
Query: 553 G 553
G
Sbjct: 557 G 557
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 103/276 (37%), Gaps = 41/276 (14%)
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
SGI V++ I+ + V + A + D+M G + VY ++AYC+
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A LV+ + S G++ Y+ L+ + Q A + M + + +Y T++
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276
Query: 482 GLMENHRPELM-------------------AAFLDEVVEDPRVE------VKTHD----- 511
G E+ + +DE+ + VE K D
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336
Query: 512 ----WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N++I CK R +DA R + M EPN+ TY LI+ L ++
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFD 603
+++ KGIK ++ + K G D
Sbjct: 397 DKMR-------DKGIKVTVYPYNSLINGYCKQGSLD 425
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 137/371 (36%), Gaps = 42/371 (11%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N Y A + G C + + +A ++ + M V PNE +F + Y L G K +L
Sbjct: 477 NNYTFTALINGFCKD-KKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE------- 331
M E G Y SLISG LCL G + ++F +
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISG---------------LCLTSGVSKANEFVADLENSYAV 580
Query: 332 ----TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
+ ++ GF + G +L E + G+ +D I+ A + +K+
Sbjct: 581 LNNFSLTALLYGFFREGRFTETYHLWDE---MAVRGVKLDLVSFTIIVYAALKQHDKEKS 637
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ EM G Y + A KE +A + G + + LI
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINN 697
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT-----GLMENHRPELMAAFLDEVVED 502
S SA L ++M + K +Y + G ME + +L +A L +
Sbjct: 698 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAK-DLHSAMLQGHL-- 754
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+N +I CKAG++++A + ++ F P+ +Y ++I+
Sbjct: 755 ----ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINK 810
Query: 563 VLMMWHEIKRK 573
+W+E+ K
Sbjct: 811 AFELWNEMLYK 821
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 191/479 (39%), Gaps = 36/479 (7%)
Query: 113 LSSLQDNHNLKRAFASVVYVIE-----KNPKLLDFQTVHTLLGSMRNAN--TAAPAFALV 165
L +L HN AS +++ ++P D + LLG +R++ AP F+ +
Sbjct: 182 LLALIREHNFLPDLASYSHLLASLLNTRDPP--DAAILERLLGDLRDSRLEPDAPLFSDL 239
Query: 166 KCMFKNRYFMP---FELWGGF-LVDICRKNSNFVAFLKVFEECCRIALDENL--DF---- 215
F R +P EL + + +++ A + R+ E L +F
Sbjct: 240 ISAFA-RAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAG 298
Query: 216 -MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+KP A NA L+G + S+ +AE V++ MS GV P+E+++ L Y G E
Sbjct: 299 EIKPRTRAYNALLKGYV-KIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWES 357
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
L M G +S +++G+ G+ + A + G F Y
Sbjct: 358 ARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHF----YN 413
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ F G L + + ++ GI D +I A G D A + EM
Sbjct: 414 VMIDTF---GKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEM 470
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
C G Y + ++ R ++ ++ GL ++ Y L++ S +
Sbjct: 471 RESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRY 530
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR---VEVKTHD 511
+ A D EA D T+ L+ + +A VV+ R +E T
Sbjct: 531 KEAI----DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVV 586
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
NS+I+AF + R+ +A L+ M F P+ TY +L+ + EQ+ V +++ E+
Sbjct: 587 LNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEM 645
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 14/235 (5%)
Query: 348 GLANLIIEAQKLEP----SGIVVDRSVGF-GIISACVNLGLSDKAHSILDEMNACGCSVG 402
G+A + EA+ L +G + R+ + ++ V +G A +LDEM+ CG +
Sbjct: 279 GIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPD 338
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
Y + AY + R A L+ ++ + G++ + ++ D+Q AF++ R
Sbjct: 339 EATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLR 398
Query: 463 DMREARIYDLKGSYLTIMTGLME----NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
+M + + + Y ++ + H ++ E +E +V T WN++I A
Sbjct: 399 EMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEP---DVVT--WNTLIDA 453
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
CK GR + A + M P TY +IN E++ V M E+K +
Sbjct: 454 HCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQ 508
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 152/366 (41%), Gaps = 19/366 (5%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
K+F+ R+ + MKP+ N+ + ++ +A K+ M G +P S+
Sbjct: 62 KLFKSILRLISKVEENGMKPDSILFNSIINAFSES-GNMKEAMKLFRKMKESGCKPTTST 120
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
F L Y G E+ ++L + + G Y+ L+ + N+E A + +
Sbjct: 121 FNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMV 180
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIIS 376
G Q D TY + + + + G +I+E +++ P+ +R+ +
Sbjct: 181 ASGM--QPDAV--TYNTLARAYAEKGETIRAEEMILEMLNRRVTPN----ERTCSIIVNG 232
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
C + D + + M G L V+ +K + T +++ + +G++
Sbjct: 233 YCKEGNMVDASRFVF-RMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRP 291
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
DV + ++ A ++ +F DM +A I ++ + G + PE + L
Sbjct: 292 DVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESIL 351
Query: 497 DEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ + P V + T ++I +C AG++E A + +M + PN +TY +LI G
Sbjct: 352 TSMRKYGVHPNVVICT----TVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWG 407
Query: 554 YVTAEQ 559
Y A+Q
Sbjct: 408 YGEAKQ 413
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 101/225 (44%), Gaps = 8/225 (3%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+++ + G +AHSI + + G L Y + A ++ +L+ + +G
Sbjct: 19 LMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENG 78
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ D ++++I A S + + A LFR M+E+ ++ T++ G + E
Sbjct: 79 MKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEAL 138
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
L E ++D V+ +N ++ A+C +E+A + +M+ +P+ TY +L
Sbjct: 139 KLL-EFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARA 197
Query: 554 YV-TAEQYFSVLMMWHEIKRKISTDGQ------KGIKFEHNLVDA 591
Y E + M+ + R+++ + + G E N+VDA
Sbjct: 198 YAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDA 242
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 4/224 (1%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
TY +V + K + LI K+E +G+ D + II+A G +A +
Sbjct: 50 TYTTLVAALTRQKLFKSILRLI---SKVEENGMKPDSILFNSIINAFSESGNMKEAMKLF 106
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+M GC + +K Y +T EA +L+ + G++ + Y+ L+ A
Sbjct: 107 RKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNK 166
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
++ + A+++ M + + +Y T+ E + E++ + RV
Sbjct: 167 ENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEML-NRRVTPNERT 225
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+ I++ +CK G + DA R + RM L PN + SLI G++
Sbjct: 226 CSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFL 269
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 133/316 (42%), Gaps = 13/316 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KPN N + C +++ +A ++ M G++P+ ++ LA YA KG +
Sbjct: 149 VKPNQRTYNILVRAWC-NKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRA 207
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC- 334
E+ M + S +++GY K GN+ ASR + M++ +
Sbjct: 208 EEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVF------RMKELGVLPNLFVF 261
Query: 335 -EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++KGFL + +G+ ++ +E +G+ D I++A + G DK I ++
Sbjct: 262 NSLIKGFLDTMDTEGVDEVL---TLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFND 318
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + + K Y + +A ++ + G+ +V +I ++
Sbjct: 319 MVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGK 378
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
+ A ++ M E + +Y T++ G E +P L A L +V+E+ V K
Sbjct: 379 MEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQP-LKAEELLQVMEEKGVFPKKGTMQ 437
Query: 514 SIIHAFCKAGRLEDAK 529
I A+ G L +++
Sbjct: 438 LIADAWRAIGLLSESE 453
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 136/667 (20%), Positives = 247/667 (37%), Gaps = 140/667 (20%)
Query: 67 NITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAF 126
N+ + ++ + N +A K + N P+ N+L L+ K A
Sbjct: 983 NVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTL---LNWYCKKGRYKAAI 1039
Query: 127 ASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD 186
+ Y+I K + D T + + ++ + +A A+ L+K M + P E+ L++
Sbjct: 1040 ELIDYMICKGIEA-DVCTYNVFIDNLCTNHRSAKAYLLLKKM-RKEMISPNEVTYNTLIN 1097
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIET 246
K +VF E + L PN NA + G C+ + +A ++++
Sbjct: 1098 GFVKEGKIGVAAQVFNEMSKFDL-------SPNCVTYNALIGGHCH-VGDFEEALRLLDH 1149
Query: 247 MSVLGVRPNESSFGFL------------------------------AYLYALKGL----- 271
M G+R NE ++G L AY + GL
Sbjct: 1150 MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGM 1209
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
++ V+L M + G + ++ YSSLI+G+ ++GN++SA I G + +K
Sbjct: 1210 LDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV----LNKI 1265
Query: 332 TYCEVVKGFLQNGNVKG------------------LANLII----------EAQK----- 358
Y ++ F Q+GNV N+++ EA+K
Sbjct: 1266 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 1325
Query: 359 ----LEPSGIVVDRSV-GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
L P+ I D + G+G I +N A S D+M CG Y LK
Sbjct: 1326 SRIGLVPNSITYDCIINGYGSIGDPLN------AFSFFDDMIKCGQHPSFFTYGSLLKGL 1379
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
CK EA + + + +D Y+ L+ + S + A +LF M + +
Sbjct: 1380 CKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 1439
Query: 474 GSYLTIMTGLME----------------------NH--------------RPELMAAFLD 497
+Y +++TGL NH P+ F +
Sbjct: 1440 YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 1499
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
E+++ T +N+II + + G++ A M + PN TY L++G+
Sbjct: 1500 EMMKKGTCP-DTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKK 1558
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
+ L ++ ST ++GI + + + L K G D ++++ K
Sbjct: 1559 QALLRYLSLY-------STMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGT 1611
Query: 618 FVDKWKY 624
D++ +
Sbjct: 1612 LADQFTF 1618
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 139/343 (40%), Gaps = 54/343 (15%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAE-----KVIETMSVLGVRPNESSFGFLAYLYALKGL 271
KP++Y CN L V D + MS G+ PN +F L ++G
Sbjct: 946 KPSVYTCNMILA------SMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGN 999
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
+K L M E GF +V Y++L++ Y K G ++A +E D+
Sbjct: 1000 LKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA------------IELIDYM-- 1045
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+ KG IEA + + +D + C N S KA+ +L
Sbjct: 1046 ----ICKG--------------IEAD-VCTYNVFID--------NLCTN-HRSAKAYLLL 1077
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+M S Y + + KE + A Q+ ++S L + Y+ALI
Sbjct: 1078 KKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHV 1137
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
DF+ A L M A + + +Y T++ GL ++ + EL L+ + + V V
Sbjct: 1138 GDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMV-VGHIA 1196
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ +I CK G L++A + + M P+ TY SLING+
Sbjct: 1197 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGF 1239
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 7/225 (3%)
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
K++ M + G ++ +F L Y+ G K +L + MN G Y+ + +G
Sbjct: 1601 KLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 1660
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
K ++ + L G + + Y ++ G + G+++G L E + L
Sbjct: 1661 NKKSAFRESTVVLHEMLENGVIPK----HAQYITLINGMCRVGDIQGAFKLKDEMEALGF 1716
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
V S ++ ++ G ++ A +LD M + + + +C++ + AE
Sbjct: 1717 GSHEVAES---AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAE 1773
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
A +L + GL+LDV Y+ LI + D +AF L+ +MR
Sbjct: 1774 ALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRH 1818
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 89/447 (19%), Positives = 159/447 (35%), Gaps = 36/447 (8%)
Query: 137 PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVA 196
P +D +TLL + A AL M +N + L +CRK
Sbjct: 1399 PGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG----- 1453
Query: 197 FLKVFEECCRIALDENLDFMKPN--IYACNAALEGCCYGLQSVSDAEKVI---ETMSVLG 251
K C + PN +Y C GL + E M G
Sbjct: 1454 --KAVTAVCLFGTAMGRGTLFPNHVMYTCLVD------GLSKAGHPKAAFYFFEEMMKKG 1505
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
P+ +F + + +G K + S M +G + Y+ L+ G+ K L
Sbjct: 1506 TCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLR-- 1563
Query: 312 RTILLCLGGGNMEQSDF-SKETYCEVVKGFLQNG----NVKGLANLIIEAQKLEPSGIVV 366
L L M + F K T+ ++ G ++G VK L +I+E G +
Sbjct: 1564 ---YLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME-------GTLA 1613
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
D+ +I+ G KA +++ MN G Y K+ E+T ++
Sbjct: 1614 DQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVL 1673
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
++ +G+ Y LI D Q AF L +M + + ++ GL+
Sbjct: 1674 HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHC 1733
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ E LD ++ R+ + +++H FC+ ++ +A + M + +
Sbjct: 1734 GKTEDAMLVLDHMLR-MRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVA 1792
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRK 573
Y LI G + ++ E++ +
Sbjct: 1793 YNVLIMGMCANGDSAAAFELYEEMRHR 1819
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/165 (18%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ Y KE A + + G + V + ++ + + + + +SLFR+M + I
Sbjct: 921 IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGI 980
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
G++ ++ GL + L ++ E+ V +N++++ +CK GR + A
Sbjct: 981 CPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIV-TYNTLLNWYCKKGRYKAAI 1039
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKI 574
+ MI E + TY I+ T + ++ ++++++
Sbjct: 1040 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEM 1084
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 148/367 (40%), Gaps = 53/367 (14%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+Y N + C+ L V A V+ + LG +P+ ++F L ++G +
Sbjct: 76 VPPNVYTLNILINSFCH-LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 134
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--Y 333
+ L M + GF +V Y +LI+G K+GN +A R + +MEQ + + Y
Sbjct: 135 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLL------RSMEQGNCQPDVVIY 188
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ ++ V NL ++ GI D ++ A NL ++L++
Sbjct: 189 TSIIDSLCKDRQVTEAFNLF---SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQ 245
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + ++ + A CKE + EA ++V + G++ DV Y L++ +
Sbjct: 246 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 305
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMT----------------------------GLME 485
A +F M SY T++ G +E
Sbjct: 306 MDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVE 365
Query: 486 NHRPELMAAF------LDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
R + M F L+E+V P V + +++++ A CK G++ +A + MI
Sbjct: 366 VIRKDKMKLFEKGRTLLNEMVNSKIMPNVVI----FSTVVDALCKEGKVMEAHDVVDMMI 421
Query: 537 FLQFEPN 543
EPN
Sbjct: 422 KRGVEPN 428
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/307 (18%), Positives = 125/307 (40%), Gaps = 10/307 (3%)
Query: 249 VLGVRPNESSFGFLAYLYALKGLQE--KIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
+L + P S F L ++ ++ ++ L + M+ FG + + LI+ + L
Sbjct: 36 LLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNR 95
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV 366
+ A + L G+ Q D T+ +++G G + +L K+ G
Sbjct: 96 VGFAFSVLAKILKLGH--QPD--PTTFTTLIRGLCVEGKIGEALHLF---DKMIDEGFQP 148
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
+ +I+ +G + A +L M C + +Y + + CK+ + EA L
Sbjct: 149 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 208
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ G+ D+ Y +L+ A +++ +L M ++I + T++ L +
Sbjct: 209 SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKE 268
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ +D +++ VE + +++ C +++A + M+ F P+ +
Sbjct: 269 GKVTEAHEIVDMMIQR-GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 327
Query: 547 YLSLING 553
Y +LIN
Sbjct: 328 YTTLINA 334
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 89/199 (44%), Gaps = 8/199 (4%)
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
CV + + H + D+M G + Y + CK T+ A +L+ + Q D
Sbjct: 126 CVEGKIGEALH-LFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPD 184
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
V Y ++I++ + AF+LF M I +Y +++ L + + L+
Sbjct: 185 VVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLN 244
Query: 498 EVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
++V P V + +++++ A CK G++ +A + MI EP+ TY +L++G+
Sbjct: 245 QMVNSKILPDVVI----FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGH 300
Query: 555 VTAEQYFSVLMMWHEIKRK 573
+ + ++ + RK
Sbjct: 301 CLQSEMDEAVKVFDMMVRK 319
>gi|357486821|ref|XP_003613698.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515033|gb|AES96656.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 749
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 139/346 (40%), Gaps = 37/346 (10%)
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
+ +E + GV S L Y+ G EK +E S M EFG Y++++
Sbjct: 70 EALELLKKNGVLVTSDSVRALVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDV 129
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
+ LE A L N+E + + TY ++ GF + G VKG ++ E +++
Sbjct: 130 LNEKLLELALALYTTMLKS-NVEPNFY---TYNMLIDGFCKRGEVKGAQEMLDEMKRV-- 183
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
GIV I+ C D+AH + ++M + L +CK R E
Sbjct: 184 -GIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEE 242
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A V I + G L+ +Y +LI A ++ ++ A + + M + I Y ++
Sbjct: 243 ALSFVWMIKNDGFSLNRNSYSSLINAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIR 302
Query: 482 GLMENHRPELMAAFLDEVV---------------------------EDPRVEVKTHDWNS 514
GL + R A L+E+ + R+E+ H+ +
Sbjct: 303 GLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAQSLRLEISEHNVCT 362
Query: 515 ---IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+I CK G + +A+ +M L EP+ T+ +LING A
Sbjct: 363 HTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKA 408
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 104/503 (20%), Positives = 197/503 (39%), Gaps = 62/503 (12%)
Query: 68 ITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFA 127
+ S + L+ NN DEA K F + S +P ++ +++ L+ L+ A
Sbjct: 189 VLSTTSILYGCCQANNVDEAHKLFNDMKETS-YPPDMISCNVV--LNGFCKMGRLEEAL- 244
Query: 128 SVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDI 187
S V++I+ + L+ + +L+ + A A A MFK + +P + ++
Sbjct: 245 SFVWMIKNDGFSLNRNSYSSLINAFFKARRYREAHAWYTKMFK-QGIVPDVVLYAIMIRG 303
Query: 188 CRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCC-YGLQSVSDAEKVIET 246
K K+ EE +I L P+ Y NA ++G C GL ++ A+ +
Sbjct: 304 LSKEGRVGEAAKMLEEMTQIGLT-------PDAYCYNAVIQGLCDVGL--LNRAQSLRLE 354
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
+S N + L +G+ + EL + M + G +V +++LI+G K N
Sbjct: 355 IS----EHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANN 410
Query: 307 LESAS-----------RTILLCLGGGNMEQSDFSK-----ETYCE---VVKGFLQNGNVK 347
LE A ++ L L G+ + SD ++ + CE +++ + ++
Sbjct: 411 LEKAKNLFCKLEVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLA 470
Query: 348 G-------LANLIIEA--------------QKLEPSGIVVDRSVGFG-IISACVNLGLSD 385
G N+++ A + L+ G +V +G II + D
Sbjct: 471 GEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDRED 530
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A + M G L VY + C++ + + A L + S D + AL
Sbjct: 531 EAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYFEHLKSLPSRDNDSISALE 590
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ + Q L +AR + L Y ++ G + + A + V+++ +
Sbjct: 591 KYLFGEKLEQVIRGLLELDFKARDFKL-APYTILLIGFCQAGKVS-EALIILSVLDEFNI 648
Query: 506 EVKTHDWNSIIHAFCKAGRLEDA 528
++ +I CK RL DA
Sbjct: 649 KINATSCVHLIRGLCKEQRLHDA 671
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++PN Y N ++G C V A+++++ M +G+ P S + Y ++
Sbjct: 150 VEPNFYTYNMLIDGFC-KRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEA 208
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG-NMEQSDFS----- 329
+L + M E + M+ + +++G+ K+G LE A + + G ++ ++ +S
Sbjct: 209 HKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSSLINA 268
Query: 330 -------KET------------------YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
+E Y +++G + G V A ++ E ++ G+
Sbjct: 269 FFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQI---GL 325
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSI---LDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
D +I ++GL ++A S+ + E N C + + CK AE
Sbjct: 326 TPDAYCYNAVIQGLCDVGLLNRAQSLRLEISEHNVC-------THTILICEMCKRGMVAE 378
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
A +L + G + V ++ LI + + + A +LF + R + L
Sbjct: 379 AQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLFCKLEVGRRHSL 429
>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
Length = 466
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 164/389 (42%), Gaps = 29/389 (7%)
Query: 209 LDENLDFM-----KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
+D+ LD + KPN NAAL+G C + D +++ M G PNE++F L
Sbjct: 93 VDQALDLLNTMLCKPNTVCYNAALKGLCIA-ERWEDIGELMAEMVRKGCSPNEATFSMLI 151
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
L + VE+ M ++G V Y+ +I+ + G ++ A R + N
Sbjct: 152 SSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLL-------NS 204
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
+ V+KGF + + LI AQ +++ + I C N GL
Sbjct: 205 MVCKPDALGFNAVLKGFCRAERWHDASELI--AQMFRDDCPLIEMTFNILIDMLCQN-GL 261
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
+ A + ++M C+ + Y L + ++ A QL S + D+ +Y+A
Sbjct: 262 VNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQL---FRSMPCKPDIFSYNA 318
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
+++ + ++ A L +M + ++ ++ L + + EV+E
Sbjct: 319 VLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKG----LVDRAIEVLEQM 374
Query: 504 RVEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
T D +N++I+ F + GRL+DA + L M +P+ +Y S + G AE++
Sbjct: 375 PNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERW 431
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
+ E+ R T + K+ ++L+
Sbjct: 432 QDAEELVAEMLRNKCTPNEVTFKYANHLL 460
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 148/369 (40%), Gaps = 47/369 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR----PNESSFGFLAYLYALKGL 271
+ P+ Y N L+G C ++ + E + +R PNE +F + GL
Sbjct: 3 VAPDTYTYNTVLKGLC-----IAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 57
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA---SRTIL------------- 315
++ V+L M +G + +V YS+LI+G+ + G+++ A T+L
Sbjct: 58 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALK 117
Query: 316 -LCLGGGNMEQSDFSKE-----------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
LC+ + + E T+ ++ QN V ++ + +K
Sbjct: 118 GLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEP 177
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
V+ ++ II++ G D A +L+ M ++G LK +C+ R +A+
Sbjct: 178 DTVNYNI---IINSLSERGRVDDALRLLNSMVCKPDALGFNA---VLKGFCRAERWHDAS 231
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+L+ + L ++ LI+ + A +F M R +Y +++ G
Sbjct: 232 ELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 291
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
E E+ + P + +N+++ C+A R EDA + M+ PN
Sbjct: 292 SEQGLVEVAIQLFRSMPCKPDI----FSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPN 347
Query: 544 DQTYLSLIN 552
+ T+ LIN
Sbjct: 348 EVTFNILIN 356
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 117/295 (39%), Gaps = 51/295 (17%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV--KG 339
+ + G +V +++LI+GY++LG+L+ R M S + Y V G
Sbjct: 162 ITKCGLRPSVVSFNTLINGYIRLGDLDKGFRL------KTAMHASGVHPDVYTNTVLING 215
Query: 340 FLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
+ + L E + L P+G+ +I G D A I +M
Sbjct: 216 LCKESKMDEANELFNEMLDKGLVPNGVTFTT-----LIDGHCKSGRVDLALEIYKQMLRQ 270
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G S L Y + C++ +A L++++S GL+ D Y LI+ S D ++A
Sbjct: 271 GYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
F L + M E I LD+V + ++I
Sbjct: 331 FELRKRMIEESIR-------------------------LDDVA-----------YTALIS 354
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
C+ GR DA++ LR M+ + +P + TY +ING+ + + E++R
Sbjct: 355 GLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQR 409
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 108/258 (41%), Gaps = 22/258 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QE 273
++P++ + N + G L + ++ M GV P+ + L + GL +
Sbjct: 167 LRPSVVSFNTLINGYIR-LGDLDKGFRLKTAMHASGVHPDVYTNTVL-----INGLCKES 220
Query: 274 KIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
K+ E L NE G V +++LI G+ K G ++ A M + +S
Sbjct: 221 KMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIY------KQMLRQGYSP 274
Query: 331 E--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
+ TY ++ G + G++K +LI+E + G+ D+ +I G + A
Sbjct: 275 DLITYNTLIYGLCRKGDLKQARDLIVE---MSMKGLKPDKITYTTLIDGSCKEGDLETAF 331
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
+ M + Y + C+E R +A +++ ++ S GL+ + G Y +I
Sbjct: 332 ELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGF 391
Query: 449 ITSQDFQSAFSLFRDMRE 466
D ++A L ++M+
Sbjct: 392 CKQGDVKTASKLLKEMQR 409
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 150/406 (36%), Gaps = 34/406 (8%)
Query: 108 SLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKC 167
SLI + S + + FA+++ K + D L+ + + A +
Sbjct: 34 SLIQIVVSRKGKDSASAVFAAILET--KGAQRSDIYVFSGLITAYLESGFLRDAIECFRL 91
Query: 168 MFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFE-------ECCRIALDENLDFMKPNI 220
K+++++PF D CRK + LK F+ E +L F NI
Sbjct: 92 TRKHKFWVPF--------DTCRKVLEHLMKLKYFKLVWGFYKEILECGYPTSLYFF--NI 141
Query: 221 YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
EG + A+ V + ++ G+RP+ SF L Y G +K L++
Sbjct: 142 LMHRFCKEG------EIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKT 195
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
M+ G + + LI+G K ++ A+ L G + T+ ++ G
Sbjct: 196 AMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNG----VTFTTLIDGH 251
Query: 341 LQNGNVKGLANLIIEAQK-LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
++G V +L +E K + G D +I G +A ++ EM+ G
Sbjct: 252 CKSGRV----DLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGL 307
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
Y + CKE A +L + ++LD Y ALI A
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEK 367
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ R+M + G+Y I+ G + + + L E+ D V
Sbjct: 368 MLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHV 413
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
D+ + LI A + S + A FR R+ + + + ++ LM+ +L+ F
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
E++E + +N ++H FCK G + A+ + P+ ++ +LINGY+
Sbjct: 125 KEILE-CGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYI 182
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 145/362 (40%), Gaps = 54/362 (14%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVI---ETMSVLGVRPNESSFGFLAYLYALKGLQE 273
+PN+ + + ++G C V + E+ I M GV+PN +F L + +G
Sbjct: 234 RPNVISYSIIIDGLC----KVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVI 289
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE-- 331
K +L +M + G + Y+SLI G+ +G+L SA + +M + +
Sbjct: 290 KAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFV------SMPSKGYEPDVI 343
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+Y ++ G+ + V+ L E + G+ D ++ A G D A +
Sbjct: 344 SYNMLINGYCKTLKVEEAMKLFNEMLHV---GMWPDVKTSGVLLKALFLAGKVDDAKELF 400
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+ L + L CK EA +L ++ S ++LD+ + LI+ +
Sbjct: 401 RVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKA 460
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
++A+ LF + E E +P+ MA
Sbjct: 461 GKLETAWELFEKLYE------------------EGIQPDAMA------------------ 484
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
++S+IH FCK G+++ A ++M P+ TY L+ G+ + + V+ + H +
Sbjct: 485 YSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMI 544
Query: 572 RK 573
K
Sbjct: 545 EK 546
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 154/382 (40%), Gaps = 55/382 (14%)
Query: 188 CRKNSNFVAFLKVFEECCRIA--------LDENLD-FMKPNIYACNAALEGCCYGLQSVS 238
CR N +++ + + C++ +E +D ++PN+ + ++ C Q V
Sbjct: 233 CR--PNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQ-VI 289
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
A+K++E M +G+ PN ++ L + L G EL M G+ ++ Y+ LI
Sbjct: 290 KAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLI 349
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
+GY K +E A + + L G + + +
Sbjct: 350 NGYCKTLKVEEAMK-----------------------LFNEMLHVGMWPDVKTSGVLLKA 386
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
L +G V D F +I K +++ ++ C C + L CK
Sbjct: 387 LFLAGKVDDAKELFRVI----------KPYAMPKDL--CICCI-------FLDGLCKNGY 427
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
EA +L ++ S ++LD+ + LI+ + ++A+ LF + E I +Y +
Sbjct: 428 IFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSS 487
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
++ G + + + A L + +E+ ++ ++ F ++ +LE + L RMI
Sbjct: 488 MIHGFCKKGQVD-KANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEK 546
Query: 539 QFEPNDQTYLSLINGYVTAEQY 560
P+D Y + + E+Y
Sbjct: 547 DVWPDDGIYAIVEDMVCKDEKY 568
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 12/274 (4%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
+ ++G +V Y++L++GY++LG+L+ R L G Q D TY ++ G
Sbjct: 150 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVY--TYSVLINGLC 205
Query: 342 QNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
+ + L E + L P+G+ + C N G D A I +M +
Sbjct: 206 KESKMDDANELFDEMLVKGLVPNGVTFTTLID----GHCKN-GRVDLAMEIYKQMLSQSL 260
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
L Y + CK+ +A L+ ++S GL+ D Y LI+ D +AF
Sbjct: 261 LPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFE 320
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAF 519
+ M + I +Y I++GL + RP L E++ ++ T + II+ F
Sbjct: 321 HRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLS-VGLKPDTGTYTMIINEF 379
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
CK G + + L+ M P+ TY L+NG
Sbjct: 380 CKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
D+ + LI A + S + A +R RE +++ + ++ LM+ +L+ F
Sbjct: 53 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFY 112
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+E++E + +N ++H FCK G + A+ + P+ +Y +L+NGY+
Sbjct: 113 EEILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 165/405 (40%), Gaps = 27/405 (6%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ-EK 274
MKP+ NA + V +A K+ + M G +P S++ L + + G E
Sbjct: 88 MKPDSILLNAMINAFSES-GKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYES 146
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+ LE + + Y+ LI + LE A + + G Q D TY
Sbjct: 147 MKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGI--QPDVV--TYN 202
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVV--DRSVGFGIISACVNLGLSDKAHSILD 392
+ + + QNG + LI++ P IV +R+ G IIS G +A L
Sbjct: 203 TMARAYAQNGETERAERLILKM----PYNIVKPNERTCGI-IISGYCKEGNMPEALRFLY 257
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M G V+ +K Y T + + + G++ DV + ++ A ++
Sbjct: 258 RMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAG 317
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKT 509
++ +F DM +A I +Y + G + +P A L + + P V + T
Sbjct: 318 LMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFT 377
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+II +C AG+++ A R +M + PN +TY +LI GY A+Q +
Sbjct: 378 ----TIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKA------ 427
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
+ ++T ++G+ E + + A G F +++ S+E
Sbjct: 428 -EELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEANRILNGSEE 471
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 113/280 (40%), Gaps = 11/280 (3%)
Query: 210 DENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALK 269
DEN+ KPN N ++ C + + +A V+ M G++P+ ++ +A YA
Sbjct: 156 DENV---KPNDRTYNILIQAWCTK-KKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQN 211
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
G E+ L M +ISGY K GN+ A R + G D +
Sbjct: 212 GETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELG----VDPN 267
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
+ ++KG+L + G+ + +E GI D I++A + GL +
Sbjct: 268 PVVFNSLIKGYLDTTDTNGVDEALT---LMEEFGIKPDVVTFSTIMNAWSSAGLMENCEE 324
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
I ++M G + Y K Y + + +A L+ +S G+Q +V + +I
Sbjct: 325 IFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWC 384
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+ AF L M E +Y T++ G E +P
Sbjct: 385 AAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQP 424
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+++ + G +A ++ + + G L Y + A ++ R L+ ++ +G
Sbjct: 28 LMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 87
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ D +A+I A S A +F+ M+E +Y T++ G RP
Sbjct: 88 MKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESM 147
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
L+ + +D V+ +N +I A+C +LE+A L +M+ +P+ TY ++
Sbjct: 148 KLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 207
Query: 554 Y 554
Y
Sbjct: 208 Y 208
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 9/227 (3%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
TY +V + K + L+ K+ +G+ D + +I+A G D+A I
Sbjct: 59 TYTTLVAALTRQKRFKSIPALL---SKVADNGMKPDSILLNAMINAFSESGKVDEAMKIF 115
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV-MDISSSGLQLDVGNYDALIEASIT 450
+M GC Y +K + R E+ +L+ M ++ + Y+ LI+A T
Sbjct: 116 QKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCT 175
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ + A+++ M + I +Y T+ +N E +++ P VK +
Sbjct: 176 KKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERL---ILKMPYNIVKPN 232
Query: 511 DWNS--IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+ II +CK G + +A R L RM L +PN + SLI GY+
Sbjct: 233 ERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYL 279
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 8/233 (3%)
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
E R+ L + +KPN C + G C ++ +A + + M LGV PN F
Sbjct: 215 ERAERLILKMPYNIVKPNERTCGIIISGYCKE-GNMPEALRFLYRMKELGVDPNPVVFNS 273
Query: 262 LAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGG 321
L Y + E +LM EFG +V +S++++ + G +E+ + G
Sbjct: 274 LIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAG 333
Query: 322 NMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
+ D Y + KG+++ G + L+ K G+ + + IIS
Sbjct: 334 --IEPDI--HAYSILAKGYVRAGQPRKAEALLTSMSKY---GVQPNVVIFTTIISGWCAA 386
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
G D+A + ++M+ G S L Y + Y + + +A +L+ + G+
Sbjct: 387 GKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGV 439
>gi|255661008|gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 369
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 142/335 (42%), Gaps = 11/335 (3%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ AE+V + + V P+ + + + G + EL +M G S F +
Sbjct: 6 IDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREGNRSVASF-NI 64
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA 356
++ G G ++ + L GG +E S TY +V GF +NG + ++ A
Sbjct: 65 MMRGLFDNGRVDEVNSIWELMKKGGYVEDS----ITYGILVHGFCKNGYINKSLRVLETA 120
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
++ G V+D +I+ +KA S+L+ M GC VY +
Sbjct: 121 ER---KGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGA 177
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
++ +A ++ ++ + + Y+ LI S+ F A+ L ++M E + +Y
Sbjct: 178 SKSEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITY 237
Query: 477 LTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
+M GL H+ E+ ++V ++ + +V+ H N++IH C G+ + A M
Sbjct: 238 SLLMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMH--NTLIHGLCSVGKTQLALSLYLDM 295
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+ PN T +L+ G+ + L++W I
Sbjct: 296 NYWNCAPNLVTQNTLMEGFYKDGDMRNALVIWARI 330
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 160/401 (39%), Gaps = 31/401 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ ++ + C +++ AE + M GV P+ ++ L Y Y+ G ++
Sbjct: 252 IPPDLVTYSSVVHALCKA-RAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEA 310
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V + M +V ++L+ K G ++ A R + + FS Y
Sbjct: 311 VRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA-RDVFDTMAMKGQNPDVFS---YTI 366
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ G + + +L + GI D +I A N G+ DKA I +EM
Sbjct: 367 MLNGYATKGCLVDMTDLF---DLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 423
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y+ + A C+ + +A + + G+ D Y LI+ T
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMT-GLMENHRPELMAAFLDEVVEDPRVEVKTHD--- 511
A L ++ G L I+ G + N+ +L + + D V V H
Sbjct: 484 KAKELISEIMN------NGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 537
Query: 512 -WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+N ++ +C G++E A R M+ EPN Y +L+NGY + L ++ E+
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597
Query: 571 KRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
QKGIK LY ++ G F+A V K
Sbjct: 598 L-------QKGIK-----PSTILYNIIIDGLFEAGRTVPAK 626
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/404 (19%), Positives = 152/404 (37%), Gaps = 53/404 (13%)
Query: 218 PNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P++ A N + C YG + +A V +TM++ G P+ S+ + YA KG +
Sbjct: 324 PDVVALNTLMGSLCKYG--KIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMT 381
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+L LM G + + ++ LI Y G L+ A
Sbjct: 382 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKA-------------------------- 415
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+I ++ G+ +I+A +G D A ++M
Sbjct: 416 ----------------MIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMID 459
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G Y ++ +C +A +L+ +I ++G++LD+ + ++I
Sbjct: 460 QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMD 519
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A ++F ++ Y +M G + E D +V +E + +++
Sbjct: 520 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS-AGIEPNVVGYGTLV 578
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+ +CK GR+++ R M+ +P+ Y +I+G A + + +HE+
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT----- 633
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
+ GI L L K FD + + ++ + M V +D
Sbjct: 634 --ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 675
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 410 LKAYCKEHRTAEATQLVMDISSS-GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
LK +C+ RT EA +++ + G DV +Y+ L+++ A L R M E
Sbjct: 155 LKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGG 214
Query: 469 IY---DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
D+ +Y T++ G + E+V+ + ++S++HA CKA +
Sbjct: 215 TVCSPDVV-AYNTVIDGFFKEGDVNKACDLFKEMVQRG-IPPDLVTYSSVVHALCKARAM 272
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ A+ LR+M+ P++ TY +LI GY + Q+ + ++ E++R+
Sbjct: 273 DKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQ 320
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 140/351 (39%), Gaps = 43/351 (12%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
+N D I A +GC + D + + M G+ P+ +F L YA G
Sbjct: 357 QNPDVFSYTIMLNGYATKGC------LVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 410
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
+ +K + + + M + G +V Y ++I+ ++G ++ A + G + K
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD----K 466
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIE----AQKLEPS--GIVVDRSVGFG-------IISA 377
Y +++GF +G++ LI E +L+ G +++ G I
Sbjct: 467 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDL 526
Query: 378 CVNLGLS-------------------DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
VN+GL +KA + D M + G + Y + YCK R
Sbjct: 527 TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGR 586
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
E L ++ G++ Y+ +I+ + A F +M E+ I K +Y
Sbjct: 587 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646
Query: 479 IMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
++ GL +N R A FL + + V++ N++I + R+E+AK
Sbjct: 647 VLRGLFKN-RCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 696
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 89/236 (37%), Gaps = 11/236 (4%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
L V DA+ + + +G+ P+ + L Y L G EK + + M G +V
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLAN 351
Y +L++GY K+G ++ M Q T Y ++ G + G
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFR------EMLQKGIKPSTILYNIIIDGLFEAGRT---VP 624
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++ ++ SGI +++ ++ D+A + E+ A + + +
Sbjct: 625 AKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIA 684
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ R EA L IS SGL Y +I + + A +F M+ A
Sbjct: 685 GMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNA 740
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 131/305 (42%), Gaps = 12/305 (3%)
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
+G N S+ L + G+ E+++ + M E G + Y+ L++G V +ES
Sbjct: 126 MGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIES 185
Query: 310 ASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A R + + ME + TY ++KG+ Q G + + + +E + D
Sbjct: 186 AERVLEV------MENGKIGPDVVTYNTMIKGYCQVGKTQ---KAFEKFRDMELRNVAPD 236
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+ +I AC G D S+ EM+ G + Y + CKE + E +
Sbjct: 237 KITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFE 296
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ G +++V Y ALI+++ + A LF M++ + +Y ++ + ++
Sbjct: 297 KMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSG 356
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
R + +L E V V ++S+I KAGR+ +A++ M+ P+ Y
Sbjct: 357 RLDEAMEYL-EFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCY 415
Query: 548 LSLIN 552
+LI+
Sbjct: 416 NALID 420
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 88/205 (42%), Gaps = 9/205 (4%)
Query: 421 EATQLVMDISSSG-LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
E+ + V+++ +G + DV Y+ +I+ Q AF FRDM + K +Y+T+
Sbjct: 184 ESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTL 243
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ +L + E+ E+ +E+ H ++ +I CK G+ + +MI
Sbjct: 244 IQACYAEGDFDLCLSLYHEMDEN-GLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKG 302
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKG 599
+ N Y +LI+ ++++ +K+ +G++ + + + K
Sbjct: 303 CKVNVAIYTALIDSNAKCGNMGEAMLLFERMKK-------EGLEPDVVTYGVVVNCMCKS 355
Query: 600 GFFDAVMQVVEKSQEMKVFVDKWKY 624
G D M+ +E + V V+ Y
Sbjct: 356 GRLDEAMEYLEFCRVNGVAVNAMLY 380
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
G ++V ++LI++ + + ++R M+E + +Y ++ GL+ + E
Sbjct: 127 GFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESA 186
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
L EV+E+ ++ +N++I +C+ G+ + A R M P+ TY++LI
Sbjct: 187 ERVL-EVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQ 245
Query: 553 GYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
+ L ++HE+ + G++ + Y+LV GG
Sbjct: 246 ACYAEGDFDLCLSLYHEMD-------ENGLE-----IPPHAYSLVIGGL 282
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 103/271 (38%), Gaps = 14/271 (5%)
Query: 263 AYLYALKGL--QEKIVELESL---MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
AY + GL + K VE ++ M + G + Y++LI K GN+ A +L
Sbjct: 274 AYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEA----MLL 329
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
E + TY VV ++G + + + +G+ V+ + +I
Sbjct: 330 FERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYL---EFCRVNGVAVNAMLYSSLIDG 386
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
G +A + +EM GC Y + A K +T EA + G
Sbjct: 387 LGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQT 446
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
V Y +I + A ++ M + I ++ + GL + + LD
Sbjct: 447 VYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLD 506
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
E+ P + + +++ CKAGR+++A
Sbjct: 507 ELA--PMGVIPETAFEDMLNVLCKAGRIKEA 535
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 151/374 (40%), Gaps = 31/374 (8%)
Query: 217 KPNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
KP+I + + L G S ++D + M G+ PN+ F L YA G+ +K
Sbjct: 362 KPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKA 421
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------------SRTILLCLGGG 321
+ + M G V ++++IS ++G L+ A S + CL G
Sbjct: 422 MLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG 481
Query: 322 NMEQSDF--SKETYCEVVKGFLQNGNVKGLANLI---IEAQKLEPSGIVVDRSVGFG--- 373
+ +KE E++ + VK +++I + ++ ++D V G
Sbjct: 482 CCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP 541
Query: 374 -------IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
++ +G ++A ++LD M + G +Y + YCK R +A +
Sbjct: 542 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 601
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
D+ G++ Y ++ ++ +A +F +M E+ +Y ++ GL N
Sbjct: 602 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRN 661
Query: 487 HRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ + L+++ V+ +N +I A K GR ++AK + PN QT
Sbjct: 662 NCTDEANMLLEKLFA-MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQT 720
Query: 547 YLSLINGYVTAEQY 560
Y +I + E Y
Sbjct: 721 YSMMITNLIKEESY 734
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 162/395 (41%), Gaps = 30/395 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+++ + ++G C +++ AE+V+E M G RPN ++ L + Y++ G+ +
Sbjct: 256 IAPDLFTYSLIIDGLCKS-KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 314
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTIL--LCLGGGNMEQSDFSK--E 331
V + M+ G + +S I K G A + I + L G + +S
Sbjct: 315 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA-KCIFDSMVLKGPKPDIISYSTMLH 373
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
Y L +V + NL++ GI ++ V +I+A G+ DKA I
Sbjct: 374 GYATATDSCL--ADVHNIFNLMLT------KGIAPNKHVFNILINAYARCGMMDKAMLIF 425
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
++M G + + + C+ R +A + G+ Y LI+
Sbjct: 426 EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNH 485
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYL-TIMTGLMENHRPELMAAFLDEVVE-DPRVEVKT 509
+ A L +M I Y +I+ L + R +D +V+ R V T
Sbjct: 486 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 545
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE 569
+NS++ +C G +E+A L M + EPN Y +L++GY + L ++ +
Sbjct: 546 --FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 603
Query: 570 IKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDA 604
+ KG+K + LY+++ G F A
Sbjct: 604 ML-------HKGVK-----PTSVLYSIILHGLFQA 626
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 12/256 (4%)
Query: 372 FGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISS 431
+ +I V G DKAH + EM G + + +K CK +A +V +
Sbjct: 194 YSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVD 253
Query: 432 SGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-MENHRPE 490
SG+ D+ Y +I+ S+ A + M EA +Y +++ G + E
Sbjct: 254 SGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNE 313
Query: 491 LMAAF--LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
+ F + P V+ + NS IHA K GR +AK M+ +P+ +Y
Sbjct: 314 SVRVFKQMSSCGVIPTVD----NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYS 369
Query: 549 SLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQV 608
++++GY TA S L H I + T KGI ++ + + A + G D M +
Sbjct: 370 TMLHGYATATD--SCLADVHNIFNLMLT---KGIAPNKHVFNILINAYARCGMMDKAMLI 424
Query: 609 VEKSQEMKVFVDKWKY 624
E Q + D +
Sbjct: 425 FEDMQNKGMIPDTVTF 440
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 171/475 (36%), Gaps = 87/475 (18%)
Query: 57 QQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL 116
+Q + T+ N + + +H ++ +E+ + FK +++ + P+ NS I L
Sbjct: 284 EQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKH 343
Query: 117 QDNHNLKRAFASVVYVIEKNPKLLDFQT---------------VHTLLGSMRNANTAAPA 161
+ K F S+V K P ++ + T VH + M A
Sbjct: 344 GRTNEAKCIFDSMVLKGPK-PDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNK 402
Query: 162 F-------ALVKCMFKNRYFMPFELWGGFLVDICRKN--SNFVAFLKVFEECCRIA-LDE 211
A +C ++ + FE D+ K + V F V CRI LD+
Sbjct: 403 HVFNILINAYARCGMMDKAMLIFE-------DMQNKGMIPDTVTFATVISSLCRIGRLDD 455
Query: 212 NL-------DFMKPN---IYACNAALEGCCY----------------------GLQ---- 235
L D P +Y C ++GCC G++
Sbjct: 456 ALHKFNHMVDIGVPPSEAVYGC--LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 513
Query: 236 ---------SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG 286
V++ + +++ M G RPN +F L Y L G E+ L M G
Sbjct: 514 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 573
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV 346
Y +L+ GY K G ++ A L G S Y ++ G Q
Sbjct: 574 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL----YSIILHGLFQARRT 629
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
+ E +E V + G + C N +D+A+ +L+++ A + +
Sbjct: 630 TAAKKMFHEM--IESGTTVSIHTYGVVLGGLCRN-NCTDEANMLLEKLFAMNVKFDIITF 686
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ A K R EA +L IS+ GL ++ Y +I I + ++ A +LF
Sbjct: 687 NIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 741
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ Y + HR +V + +GL D +Y +LI + + A LF +M E +
Sbjct: 163 IDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGV 221
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+I+ L + + + + ++V D + ++ II CK+ ++ A+
Sbjct: 222 LPKILICNSIIKELCKMKEMDKAESIVQKMV-DSGIAPDLFTYSLIIDGLCKSKAMDKAE 280
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
R L +M+ PN TY SLI+GY S+ MW+E R G+ +
Sbjct: 281 RVLEQMVEAGTRPNSITYNSLIHGY-------SISGMWNESVRVFKQMSSCGVIPTVDNC 333
Query: 590 DAFLYALVKGG 600
++F++AL K G
Sbjct: 334 NSFIHALFKHG 344
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 120/322 (37%), Gaps = 63/322 (19%)
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC-EVVKGFLQNGNVKGLAN 351
F SLI G+VK G ++ A CL MEQ K C ++K + + +
Sbjct: 192 FSYSLIYGFVKDGEVDKAH-----CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAES 246
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++ QK+ SGI D II DKA +L++M G Y +
Sbjct: 247 IV---QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIH 303
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
Y E+ ++ +SS G+ V N ++ I A A +F M
Sbjct: 304 GYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMV------ 357
Query: 472 LKG------SYLTIMTG--------LMENH--------------------------RPEL 491
LKG SY T++ G L + H R +
Sbjct: 358 LKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGM 417
Query: 492 M--AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
M A + E +++ + T + ++I + C+ GRL+DA M+ + P++ Y
Sbjct: 418 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 477
Query: 550 LING------YVTAEQYFSVLM 565
LI G V A++ S +M
Sbjct: 478 LIQGCCNHGELVKAKELISEMM 499
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 128/317 (40%), Gaps = 47/317 (14%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AE++ M LG P+E ++ + E +++++ M+ G+ S V Y+++IS
Sbjct: 785 AEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIIS 844
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
G VK L+ A + G FS TY ++ G L++GN+
Sbjct: 845 GLVKSKMLDEAINLYYQLMSEG------FSPTPCTYGPLLDGLLKDGNI----------- 887
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ A ++ DEM CGC +Y L Y
Sbjct: 888 ---------------------------EDAEALFDEMLECGCEPNCAIYNILLNGYRIAG 920
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
T + +L + G+ D+ +Y +I+ S F+ + + + +Y
Sbjct: 921 DTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYN 980
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++ GL ++ R E + ++ +E + + +NS+I KAG+ +A + ++
Sbjct: 981 LLIHGLGKSGRLEEALSLYND-MEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLA 1039
Query: 538 LQFEPNDQTYLSLINGY 554
++PN TY +LI GY
Sbjct: 1040 KGWKPNVFTYNALIRGY 1056
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/403 (19%), Positives = 170/403 (42%), Gaps = 45/403 (11%)
Query: 183 FLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEK 242
++ C K SN +K+F E + EN P++ A N+ ++ Y ++A K
Sbjct: 491 MMIKCCSKASNADEAMKIFAE-----MIENR--CAPDVLAMNSLID-MLYKAGRGNEAWK 542
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+ + + + P + ++ L +G +++++L MN F ++ Y++++
Sbjct: 543 IFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLC 602
Query: 303 KLGNLESA-----SRTILLCLGG--------------GNMEQS-------------DFSK 330
K G + A S T+ C+ G ++++ D++
Sbjct: 603 KNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYA- 661
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
T C ++ F+++G +K + + E L+P VDRS ++ + ++K+
Sbjct: 662 -TVCTILPSFVRSGLMKEALHTVRE-YILQPDS-KVDRSSVHSLMEGILKRDGTEKSIEF 718
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+ + + G + P ++ +CK A +LV + G+ L G+Y+ALI +
Sbjct: 719 AENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVD 778
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
A LF +M+ + +Y I+ + ++ R E M +E + + +
Sbjct: 779 EDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEE-MHNKGYKSTYV 837
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N+II K+ L++A +++ F P TY L++G
Sbjct: 838 TYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDG 880
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 158/406 (38%), Gaps = 27/406 (6%)
Query: 228 EGCCYGLQ------SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQEKIVELES 280
E C Y L+ V D +V + M ++ N +F + ++G L+ V L
Sbjct: 102 ESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVAL-P 160
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
+M E G Y+ LI VK G A G + + TY ++ F
Sbjct: 161 VMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVP----TVRTYSVLMLAF 216
Query: 341 LQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
+ + + + L+ +EA+ + P+ V ++ ++ G ++A+ IL +M G
Sbjct: 217 GKRRDAETVVGLLGEMEARGVRPN--VYSYTICIRVLGQA---GRLEEAYRILRKMEEEG 271
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
C + ++ C R A+A + + +S + D Y L++ S D +S
Sbjct: 272 CKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVS 331
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
++ ++ D SY + L + R + DE+ + + + + +NS+I
Sbjct: 332 EIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIP-QQYSYNSLISG 390
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
F KA R A M PN T++ IN + + + L + +K
Sbjct: 391 FLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMK------- 443
Query: 579 QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KGI + +A LY L K G +V + + M + D Y
Sbjct: 444 SKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITY 489
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 94/251 (37%), Gaps = 34/251 (13%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+K E G+ + +I V+ L D A + EM GC Y L A K
Sbjct: 755 KKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKS 814
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R + ++ ++ + G + Y+ +I + S+ A +L+ + +Y
Sbjct: 815 MRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTY 874
Query: 477 LTIMTGLMENHRPELMAAFLDEVVE---DPRVEV-------------------------- 507
++ GL+++ E A DE++E +P +
Sbjct: 875 GPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVE 934
Query: 508 -----KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+ +I C GRL D +++ + EP+ TY LI+G + +
Sbjct: 935 QGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEE 994
Query: 563 VLMMWHEIKRK 573
L +++++++K
Sbjct: 995 ALSLYNDMEKK 1005
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 118/320 (36%), Gaps = 51/320 (15%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+ D K+ E M G + ++ ++ L K L E I LM+E GFS Y
Sbjct: 817 IEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE-GFSPTPCTYG 875
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
L+ G +K GN+E A E + E C + N+++
Sbjct: 876 PLLDGLLKDGNIEDAEALF--------DEMLECGCEPNCAIY-------------NILLN 914
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
++ G ++K + + M G + + Y + C
Sbjct: 915 GYRIA---------------------GDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCA 953
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
+ R + ++ GL+ D+ Y+ LI S + A SL+ DM + I +
Sbjct: 954 DGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYT 1013
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
Y +++ L + + +E++ P V +N++I + +G E+A
Sbjct: 1014 YNSLILYLGKAGKAAEAGKMYEELLAKGWKPNV----FTYNALIRGYSVSGSPENAFAAY 1069
Query: 533 RRMIFLQFEPNDQTYLSLIN 552
RMI PN TY+ L N
Sbjct: 1070 GRMIVGGCRPNSSTYMQLPN 1089
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 199/500 (39%), Gaps = 43/500 (8%)
Query: 113 LSSLQDNHNLKRAFASVVYVIE-----KNPKLLDFQTVHTLLGSMRNAN--TAAPAFALV 165
L SL H+ AS +++ ++P D + LLG +R + AP F+ +
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPP--DAALLERLLGDLRESRLEPDAPLFSDL 234
Query: 166 KCMFKNRYFMP---FELWGGF-LVDICRKNSNFVAFLKVFEECCRIALDENL--DF---- 215
F R +P EL + + +++ A + R+A E L +F
Sbjct: 235 ISAFA-RAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAG 293
Query: 216 -MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+KP A NA L+G + S+ +AE+V++ MS GV P+E+++ L Y G E
Sbjct: 294 EIKPRTRAYNALLKGYVR-IASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWES 352
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
L M G +S +++G+ G+ + A + G F Y
Sbjct: 353 ARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHF----YN 408
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ F G L + + K+ GI D +I A G D+A + +EM
Sbjct: 409 VMIDTF---GKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEM 465
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
C G Y + ++ ++ ++ GL ++ Y L++ S +
Sbjct: 466 RESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRY 525
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR---VEVKTHD 511
+ A D EA D T+ L+ + +A VV+ + +EV
Sbjct: 526 KEAI----DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILV 581
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI- 570
NS+I+AF + R+ +A L+ M P+ TY +L+ + EQ+ V +++ E+
Sbjct: 582 LNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMI 641
Query: 571 ------KRKISTDGQKGIKF 584
RK + G+K+
Sbjct: 642 TSGCAPDRKARAMLRSGLKY 661
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 193/458 (42%), Gaps = 25/458 (5%)
Query: 123 KRAFASVVYVIEKNPKL---LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFEL 179
KR+ +V ++ + P+L D + T+L S+ + + A L+ M K
Sbjct: 168 KRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKS------- 220
Query: 180 WGGFLVDICRKNSNFVAFLKVFE--ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSV 237
GG ++ N+ F + E + C + + + P++ ++ ++ C +++
Sbjct: 221 -GGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKA-RAM 278
Query: 238 SDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
AE V+ M G P++ ++ + + Y++ G ++ + M G + +S
Sbjct: 279 DKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSY 338
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
+S K G + A+ G+ + D TY ++ G+ G V + NL
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGH--KPDLV--TYSVLLHGYAAEGYVVDMLNLF---N 391
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+E +GIV D SV +I A G+ D+A I +M G Y + A+ +
Sbjct: 392 SMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMG 451
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
R A+A + + GL+ D Y++LI+ + A L +M I +
Sbjct: 452 RLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFF 511
Query: 478 -TIMTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
+I+ L + R D V+ R +V T +NS+I + G++E A L M
Sbjct: 512 NSIINSLCKEGRVVEAQDIFDLVIHIGERPDVIT--FNSLIDGYGLVGKMEKAFGVLDAM 569
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
I + EP+ TY +L++GY + L+++ E+ K
Sbjct: 570 ISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSK 607
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 12/244 (4%)
Query: 384 SDKAHSILDEM--NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
S +A +L M + GCS + Y + + +E ++A L ++ G+ DV Y
Sbjct: 206 SQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTY 265
Query: 442 DALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL-MENHRPELMAAFLDEVV 500
+ I+A ++ A + R M K +Y ++ G + E F +
Sbjct: 266 SSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTR 325
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
++ T NS + + CK G+ ++A M +P+ TY L++GY
Sbjct: 326 RGLMPDIFT--CNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYV 383
Query: 561 FSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
+L +++ ++ GI +H++ + + A K G D M + + QE V D
Sbjct: 384 VDMLNLFNSME-------GNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPD 436
Query: 621 KWKY 624
W Y
Sbjct: 437 AWTY 440
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 6/168 (3%)
Query: 410 LKAYCKEHRTAEATQLVMD-ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM--RE 466
LK C R+ +A +++ + G++ D +Y ++++ Q A L M +
Sbjct: 161 LKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKS 220
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV-EVKTHDWNSIIHAFCKAGRL 525
SY T++ G E+++ V +V T ++S I A CKA +
Sbjct: 221 GGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVT--YSSYIDALCKARAM 278
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+ A+ LR+MI FEP+ TY +I+GY Q+ M+ E+ R+
Sbjct: 279 DKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRR 326
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 82/424 (19%), Positives = 156/424 (36%), Gaps = 74/424 (17%)
Query: 187 ICRKNSN------FVAFLKVFEECCRIALDENLDF----------MKPNIYACNAALEGC 230
ICR+ + V + +CC A + F +K ++ N L+
Sbjct: 105 ICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCL 164
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLM--NEFGFS 288
C+ +S ++ M LGV P+ S+ + ++ ++L M G S
Sbjct: 165 CHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCS 224
Query: 289 SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKG 348
+V Y+++I G+ + G + A C + +Q G V
Sbjct: 225 PNVVSYNTVIHGFFREGEVSKA-----------------------CNLFHEMMQQGVVPD 261
Query: 349 LA------NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD---------- 392
+ + + +A+ ++ + +V+ + + G V +SIL
Sbjct: 262 VVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFR 321
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM G + + + CK ++ EA + +++ G + D+ Y L+
Sbjct: 322 EMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEG 381
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMT-----GLMENHRPELMAAFLDEVVEDPRVEV 507
+LF M I Y ++ G+M+ E M F +++ V
Sbjct: 382 YVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMD----EAMLIFTQ--MQERGVMP 435
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY------VTAEQYF 561
+ ++I AF + GRL DA +MI + +P+ Y SLI G+ V A++
Sbjct: 436 DAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELI 495
Query: 562 SVLM 565
S +M
Sbjct: 496 SEMM 499
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 127/326 (38%), Gaps = 16/326 (4%)
Query: 232 YGLQSVSDAEKVIET-MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
YG + + D +I T M GV P+ ++G + ++ G ++ + M G
Sbjct: 412 YGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPD 471
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV---K 347
+ Y+SLI G+ GNL A I + G + + ++ + G V +
Sbjct: 472 TIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTV---FFNSIINSLCKEGRVVEAQ 528
Query: 348 GLANLIIEAQKLEPSGIVVDRSV-GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
+ +L+I + P I + + G+G++ G +KA +LD M + G + Y
Sbjct: 529 DIFDLVIHIGE-RPDVITFNSLIDGYGLV------GKMEKAFGVLDAMISVGIEPDVVTY 581
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
L YC+ R + L ++ S G++ Y ++ A + +M E
Sbjct: 582 SALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
+ + I+ GL N+ + A + + V+ N++I A K + E
Sbjct: 642 SGTTMDISTCGIILGGLCRNNCDDEAIALFKK-LGAMNVKFNIAIINTMIDAMYKVRKRE 700
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLIN 552
+A + PN TY +I
Sbjct: 701 EANELFDSISATGLVPNASTYGVMIT 726
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 128/317 (40%), Gaps = 47/317 (14%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AE++ M LG P+E ++ + E +++++ M+ G+ S V Y+++IS
Sbjct: 785 AEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIIS 844
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
G VK L+ A + G FS TY ++ G L++GN+
Sbjct: 845 GLVKSKMLDEAINLYYQLMSEG------FSPTPCTYGPLLDGLLKDGNI----------- 887
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ A ++ DEM CGC +Y L Y
Sbjct: 888 ---------------------------EDAEALFDEMLECGCEPNCAIYNILLNGYRIAG 920
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
T + +L + G+ D+ +Y +I+ S F+ + + + +Y
Sbjct: 921 DTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYN 980
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++ GL ++ R E + ++ +E + + +NS+I KAG+ +A + ++
Sbjct: 981 LLIHGLGKSGRLEEALSLYND-MEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLA 1039
Query: 538 LQFEPNDQTYLSLINGY 554
++PN TY +LI GY
Sbjct: 1040 KGWKPNVFTYNALIRGY 1056
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 164/401 (40%), Gaps = 41/401 (10%)
Query: 183 FLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEK 242
++ C K SN +K+F E + EN P++ A N+ ++ Y ++A K
Sbjct: 491 MMIKCCSKASNADEAMKIFAE-----MIENR--CAPDVLAMNSLID-MLYKAGRGNEAWK 542
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+ + + + P + ++ L +G +++++L MN F ++ Y++++
Sbjct: 543 IFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLC 602
Query: 303 KLGNLESA-----SRTILLC---LGGGNMEQSDFSKE----------------------T 332
K G + A S T+ C L N KE T
Sbjct: 603 KNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYAT 662
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
C ++ F+++G +K + + E L+P VDRS ++ + ++K+ +
Sbjct: 663 VCTILPSFVRSGLMKEALHTVRE-YILQPDS-KVDRSSVHSLMEGILKRDGTEKSIEFAE 720
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+ + G + P ++ CK A +LV + G+ L G+Y+ALI +
Sbjct: 721 NIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDED 780
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
A LF +M+ + +Y I+ + ++ R E M +E + + + +
Sbjct: 781 LIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEE-MHNKGYKSTYVTY 839
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
N+II K+ L++A +++ F P TY L++G
Sbjct: 840 NTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDG 880
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 158/406 (38%), Gaps = 27/406 (6%)
Query: 228 EGCCYGLQ------SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG-LQEKIVELES 280
E C Y L+ V D +V + M ++ N +F + ++G L+ V L
Sbjct: 102 ESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVAL-P 160
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
+M E G Y+ LI VK G A G + + TY ++ F
Sbjct: 161 VMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVP----TVRTYSVLMLAF 216
Query: 341 LQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
+ + + + L+ +EA+ + P+ V ++ ++ G ++A+ IL +M G
Sbjct: 217 GKRRDAETVVGLLGEMEARGVRPN--VYSYTICIRVLGQA---GRLEEAYRILRKMEEEG 271
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
C + ++ C R A+A + + +S + D Y L++ S D +S
Sbjct: 272 CKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVS 331
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
++ ++ D SY + L + R + DE+ + + + + +NS+I
Sbjct: 332 EIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIP-QQYSYNSLISG 390
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
F KA R A M PN T++ IN + + + L + +K
Sbjct: 391 FLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMK------- 443
Query: 579 QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KGI + +A LY L K G +V + + M + D Y
Sbjct: 444 SKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITY 489
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 94/251 (37%), Gaps = 34/251 (13%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+K E G+ + +I V+ L D A + EM GC Y L A K
Sbjct: 755 KKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKS 814
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R + ++ ++ + G + Y+ +I + S+ A +L+ + +Y
Sbjct: 815 MRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTY 874
Query: 477 LTIMTGLMENHRPELMAAFLDEVVE---DPRVEV-------------------------- 507
++ GL+++ E A DE++E +P +
Sbjct: 875 GPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVE 934
Query: 508 -----KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+ +I C GRL D +++ + EP+ TY LI+G + +
Sbjct: 935 QGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEE 994
Query: 563 VLMMWHEIKRK 573
L +++++++K
Sbjct: 995 ALSLYNDMEKK 1005
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 118/320 (36%), Gaps = 51/320 (15%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+ D K+ E M G + ++ ++ L K L E I LM+E GFS Y
Sbjct: 817 IEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE-GFSPTPCTYG 875
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
L+ G +K GN+E A E + E C + N+++
Sbjct: 876 PLLDGLLKDGNIEDAEALF--------DEMLECGCEPNCAIY-------------NILLN 914
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
++ G ++K + + M G + + Y + C
Sbjct: 915 GYRIA---------------------GDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCA 953
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
+ R + ++ GL+ D+ Y+ LI S + A SL+ DM + I +
Sbjct: 954 DGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYT 1013
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
Y +++ L + + +E++ P V +N++I + +G E+A
Sbjct: 1014 YNSLILYLGKAGKAAEAGKMYEELLAKGWKPNV----FTYNALIRGYSVSGSPENAFAAY 1069
Query: 533 RRMIFLQFEPNDQTYLSLIN 552
RMI PN TY+ L N
Sbjct: 1070 GRMIVGGCRPNSSTYMQLPN 1089
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 165/413 (39%), Gaps = 42/413 (10%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
K F+E RI + KP++ ++ C +SDA+ V M +P+ +
Sbjct: 244 KRFDEAYRILAKMENEGCKPDVITHTVLIQVLC-DAGRISDAKDVFWKMKKSDQKPDRVT 302
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ L + G + ++E+ + M G++ +V Y+++I ++G + A
Sbjct: 303 YITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF---- 358
Query: 319 GGGNMEQSDFSKE--TYCEVVKGFLQ---------------------NG-------NVKG 348
M+Q E +Y ++ GFL+ NG N G
Sbjct: 359 --DEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYG 416
Query: 349 LANLIIEA----QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
+ I+A + ++ GIV D G ++ G A + E+ A G S
Sbjct: 417 KSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 476
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y +K K + EA ++ D+ + DV ++LI+ + A+ +F +
Sbjct: 477 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL 536
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
+E + G+Y T++ GL + + + L+E+ +N+I+ CK G
Sbjct: 537 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS-NYPPNLITYNTILDCLCKNGA 595
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTD 577
+ DA L M P+ +Y ++I G V E+Y ++ ++K+ + D
Sbjct: 596 VNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 648
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 126/317 (39%), Gaps = 47/317 (14%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AE + M LG P+E ++ L E++++++ M+ G+ S V Y+++IS
Sbjct: 774 AEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIIS 833
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
G VK LE A N+ FS TY ++ G L+ G +
Sbjct: 834 GLVKSRRLEQAIDLYY------NLMSQGFSPTPCTYGPLLDGLLKAGRI----------- 876
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ A ++ +EM GC +Y L +
Sbjct: 877 ---------------------------EDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 909
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
T + L D+ G+ D+ +Y +I+ + + FR + E + +Y
Sbjct: 910 NTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYN 969
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++ GL ++ R E + +E ++ + + +NS+I KAG+ +A + ++
Sbjct: 970 LLIDGLGKSKRLEEAVSLFNE-MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLT 1028
Query: 538 LQFEPNDQTYLSLINGY 554
++PN TY +LI GY
Sbjct: 1029 KGWKPNVFTYNALIRGY 1045
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 162/406 (39%), Gaps = 22/406 (5%)
Query: 222 ACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELES 280
+CN LE G V D +V + M V+ N +F L GL+ V L
Sbjct: 92 SCNYMLE-LMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVAL-P 149
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
+M E G Y+ L+ VK G A + + G + S TY ++ F
Sbjct: 150 VMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVP----SVRTYSVLMVAF 205
Query: 341 LQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
+ +V+ + L+ +EA ++P+ V ++ ++ D+A+ IL +M G
Sbjct: 206 GKRRDVETVLWLLREMEAHGVKPN--VYSYTICIRVLGQAKRF---DEAYRILAKMENEG 260
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
C + + ++ C R ++A + + S + D Y L++ + D QS
Sbjct: 261 CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVM 320
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
++ M+ D +Y ++ L + R DE+ + V + + +NS+I
Sbjct: 321 EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVP-EQYSYNSLISG 379
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
F KA R DA + M +PN T++ IN Y + + + + +K
Sbjct: 380 FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK------- 432
Query: 579 QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KGI + +A L+ L K G +V + + M V D Y
Sbjct: 433 SKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITY 478
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 140/340 (41%), Gaps = 44/340 (12%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N L+ C +V+DA ++ +M+ G P+ SS+ + Y +V+
Sbjct: 578 PNLITYNTILDCLCKN-GAVNDALDMLYSMTTKGCIPDLSSYNTVIY---------GLVK 627
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
E F QM + +L+ D++ T C ++
Sbjct: 628 EERYNEAFSIFCQM--------------------KKVLI---------PDYA--TLCTIL 656
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
F++ G +K A II+ L+P G DRS ++ + +K+ + + +
Sbjct: 657 PSFVKIGLMKE-ALHIIKDYFLQP-GSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASS 714
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G ++ P +K CK+ + EA +LV S G+ L G Y++LI + A
Sbjct: 715 GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIA 774
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
LF +M+E + +Y ++ + ++ R E M +E + E +N+II
Sbjct: 775 EGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE-MHRKGYESTYVTYNTIIS 833
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
K+ RLE A ++ F P TY L++G + A
Sbjct: 834 GLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 873
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 97/251 (38%), Gaps = 34/251 (13%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+K + G+ + + +I V+ L D A + EM GC Y L A K
Sbjct: 744 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 803
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R E ++ ++ G + Y+ +I + S+ + A L+ ++ +Y
Sbjct: 804 MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 863
Query: 477 LTIMTGLMENHRPELMAAFLDEVVE----------------------------------D 502
++ GL++ R E +E++E D
Sbjct: 864 GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 923
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+ + II CKAG+L D R+++ + EP+ TY LI+G +++
Sbjct: 924 QGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 983
Query: 563 VLMMWHEIKRK 573
+ +++E+++K
Sbjct: 984 AVSLFNEMQKK 994
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 160/400 (40%), Gaps = 29/400 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ N+ + C +++ AE + M V PN ++ L Y Y+ G ++
Sbjct: 263 IPPDLVTYNSVVHALCKA-RAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEA 321
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V + M +V S L+ K G ++ A R + + FS Y
Sbjct: 322 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA-RDVFDTMAMKGQNPDVFS---YNI 377
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ G + + +L + GI D +I A N G+ DKA I +EM
Sbjct: 378 MLNGYATKGCLVDMTDLF---DLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 434
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y + A C+ + +A + + G+ D Y+ LI+ T
Sbjct: 435 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 494
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD---- 511
A L ++ ++ + +I+ L + R +M A + + D V V H
Sbjct: 495 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGR--VMDA---QNIFDLTVNVGLHPDAVV 549
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
++ ++ +C G++E A R M+ EPN Y +L+NGY + L ++ E+
Sbjct: 550 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML 609
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
Q+GIK LY+++ G F A V K
Sbjct: 610 -------QRGIK-----PSTILYSIIIDGLFQAGRTVPAK 637
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 150/394 (38%), Gaps = 58/394 (14%)
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
C YG + +A V +TM++ G P+ S+ + YA KG + +L LM G +
Sbjct: 348 CKYG--KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 405
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
++ LI Y G L+ A
Sbjct: 406 DFYTFNVLIKAYANCGMLDKA--------------------------------------- 426
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
+I ++ G+ D +I+A +G D A ++M G + Y
Sbjct: 427 ---MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 483
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ +C +A +L+ +I ++G+ LD+ + ++I A ++F +
Sbjct: 484 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 543
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLE 526
+ Y +M G + E D +V +P V V + ++++ +CK GR++
Sbjct: 544 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV----YCTLVNGYCKIGRID 599
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEH 586
+ R M+ +P+ Y +I+G A + M +HE+ + GI +
Sbjct: 600 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMT-------ESGIAMDI 652
Query: 587 NLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
+ L L K FD + + ++ + M V ++
Sbjct: 653 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 686
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 149/393 (37%), Gaps = 55/393 (13%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
+N D NI A +GC + D + + M G+ P+ +F L YA G
Sbjct: 368 QNPDVFSYNIMLNGYATKGC------LVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 421
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
+ +K + + + M + G +V Y ++I+ ++G ++ A + G K
Sbjct: 422 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD----K 477
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEA----------------QKLEPSGIVVDRSVGFGI 374
Y +++GF +G++ LI E L G V+D I
Sbjct: 478 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ---NI 534
Query: 375 ISACVNLGLS-------------------DKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
VN+GL +KA + D M + G + VY + YCK
Sbjct: 535 FDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCK 594
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
R E L ++ G++ Y +I+ + A F +M E+ I +
Sbjct: 595 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICT 654
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
Y ++ GL +N R A FL + + V++ N++I + R+E+AK +
Sbjct: 655 YNIVLRGLFKN-RCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI 713
Query: 536 IFLQFEPNDQTYLSLINGYVT------AEQYFS 562
+ PN TY +I + AE FS
Sbjct: 714 SRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFS 746
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 4/202 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS- 432
++ C + A + ++ G V + + L+ +C+ RT EA +++ +
Sbjct: 130 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPEL 189
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG--SYLTIMTGLMENHRPE 490
G DV +Y L+++ A L R M E +Y T++ G +
Sbjct: 190 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 249
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
E+V+ + +NS++HA CKA ++ A+ LR+M+ + PN+ TY +L
Sbjct: 250 KACDLFKEMVQRG-IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 308
Query: 551 INGYVTAEQYFSVLMMWHEIKR 572
I GY + Q+ + ++ E++R
Sbjct: 309 IYGYSSTGQWKEAVRVFKEMRR 330
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 89/236 (37%), Gaps = 11/236 (4%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
L V DA+ + + +G+ P+ + L Y L G EK + + M G +V
Sbjct: 525 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 584
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLAN 351
Y +L++GY K+G ++ M Q T Y ++ G Q G
Sbjct: 585 YCTLVNGYCKIGRIDEGLSLF------REMLQRGIKPSTILYSIIIDGLFQAGRTVPAK- 637
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++ ++ SGI +D ++ D+A + E+ A + + +
Sbjct: 638 --MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMID 695
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ R EA L IS S L +V Y +I I + A +F M+ A
Sbjct: 696 GMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 751
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 148/361 (40%), Gaps = 30/361 (8%)
Query: 221 YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
Y A + C +++ A ++ M GV+ + + L Y ++ VE+++
Sbjct: 222 YVYTAGIRAYCES-RNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKN 280
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--LLCLGG-----------GNMEQSD 327
+M G ++ V Y +L+ G+ ++ LE A R ++ LG + + +
Sbjct: 281 VMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKE 340
Query: 328 FSKETYCEVVK----GFLQNG-NVKGLANLIIEAQKLEPSGIVVDRSVGFGI-------- 374
+E + K G + N L + + + ++ + + + G G+
Sbjct: 341 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 400
Query: 375 --ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
I A G+ + A + D+M G V + Y + YCK+ A L+ +
Sbjct: 401 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 460
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GL +Y LI + D S L R+M E I ++ ++ G ++ + +
Sbjct: 461 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 520
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
A D+++ D V +N +I +C G + A + +M+ + +P++ TY SLI+
Sbjct: 521 ARLFDKMI-DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 579
Query: 553 G 553
G
Sbjct: 580 G 580
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 103/276 (37%), Gaps = 41/276 (14%)
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
SGI V++ I+ + V + A + D+M G + VY ++AYC+
Sbjct: 180 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 239
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A LV+ + S G++ Y+ L+ + Q A + M + + +Y T++
Sbjct: 240 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 299
Query: 482 GLMENHRPELM-------------------AAFLDEVVEDPRVE------VKTHD----- 511
G E+ + +DE+ + VE K D
Sbjct: 300 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 359
Query: 512 ----WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
+N++I CK R +DA R + M EPN+ TY LI+ L ++
Sbjct: 360 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 419
Query: 568 HEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFD 603
+++ KGIK ++ + K G D
Sbjct: 420 DKMR-------DKGIKVTVYPYNSLINGYCKQGSLD 448
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 137/371 (36%), Gaps = 42/371 (11%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N Y A + G C + + +A ++ + M V PNE +F + Y L G K +L
Sbjct: 500 NNYTFTALINGFCKD-KKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 558
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE------- 331
M E G Y SLISG LCL G + ++F +
Sbjct: 559 YDQMVEMGLKPDNYTYRSLISG---------------LCLTSGVSKANEFVADLENSYAV 603
Query: 332 ----TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
+ ++ GF + G +L E + G+ +D I+ A + +K+
Sbjct: 604 LNNFSLTALLYGFFREGRFTETYHLWDE---MAVRGVKLDLVSFTIIVYAALKQHDKEKS 660
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ EM G Y + A KE +A + G + + LI
Sbjct: 661 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINN 720
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT-----GLMENHRPELMAAFLDEVVED 502
S SA L ++M + K +Y + G ME + +L +A L +
Sbjct: 721 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAK-DLHSAMLQGHL-- 777
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+N +I CKAG++++A + ++ F P+ +Y ++I+
Sbjct: 778 ----ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINK 833
Query: 563 VLMMWHEIKRK 573
+W+E+ K
Sbjct: 834 AFELWNEMLYK 844
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 113/520 (21%), Positives = 202/520 (38%), Gaps = 51/520 (9%)
Query: 58 QQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANS-LFPSKPVTNSLIAHLSSL 116
Q +++ + N+ + + + D+A + FK++++ P NSL+ L S
Sbjct: 98 QLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCS- 156
Query: 117 QDNHNLKRAFASVVYVIEKN--PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYF 174
+ AF Y+ + P ++ + T LL + A A L + M +
Sbjct: 157 --GERMSEAFVLFEYMAKAGCEPNVISYST---LLDGLCKAGRLDEACRLWEEMVEKSCV 211
Query: 175 MPFELWGGFLVDICRKNSNFVAFLKVFE--ECCR-----------IALDENLDFMKPNIY 221
+ F+ +C+ N +V E +CCR +A + + +
Sbjct: 212 PDLVAYTSFVTGLCKAN-------RVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGH 264
Query: 222 A---CNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY-LYALKGLQEKIVE 277
A N +E C + +A K E M P+ F L + + K L + ++
Sbjct: 265 AEEAQNQMIEHLCRS-GMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323
Query: 278 LESL--MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ + M EF + Y+ ++ K L+ A + M S + TY
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV------NEMANYGLSPDVVTY 377
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+V G + G + +L+ E K G+ D I++A G D A S L+
Sbjct: 378 SALVDGLCKLGKLDRACDLLEEMSK---EGVFPDSFTDASILNALSKAGKVDYALSHLET 434
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M A G + L Y L CK R EA + + ++ DV +Y +I A S
Sbjct: 435 MKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQ 494
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A ++F++M + + Y +++ GL N +L L + P + H
Sbjct: 495 AAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKP--DFVMHKM- 551
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
++ CKAG+ EDA + RM F + TY+S+++G
Sbjct: 552 -VLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSG 590
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 182/453 (40%), Gaps = 52/453 (11%)
Query: 193 NFVAFLKVFEECCRIA-LDENLDFMK---------PNIYACNAALEGCCYGLQSVSDAEK 242
N + + V + CC+ + +D+ L+ K P++ N+ L+G C G + +S+A
Sbjct: 107 NVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSG-ERMSEAFV 165
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+ E M+ G PN S+ L G ++ L M E +V Y+S ++G
Sbjct: 166 LFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLC 225
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
K + A C + S + V+ + G+ + N +IE L S
Sbjct: 226 KANRVAEACD----CCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIE--HLCRS 279
Query: 363 GIVVDRSVGFG-----------------IISACVNLGLSDKA--HSILDEMNACGCSVGL 403
G++ + F I + C + L D + M C L
Sbjct: 280 GMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNL 339
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y + CK + EA +LV ++++ GL DV Y AL++ A L +
Sbjct: 340 ETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEE 399
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD---WNSIIHAFC 520
M + ++ + +I+ L + + + + L E + T D +N+++ C
Sbjct: 400 MSKEGVFPDSFTDASILNALSKAGKVDYALSHL----ETMKARGSTPDLVTYNTLLDGLC 455
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTDGQ 579
KAGR+++A L +M+ + P+ +Y +I + Q ++ E +KR + D
Sbjct: 456 KAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPD-- 513
Query: 580 KGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
H+L+D L + G D +++++ S
Sbjct: 514 --TVLYHSLLD----GLARNGLEDLALELLKTS 540
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 12/208 (5%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y L+ CK +A +L+ + SG++L+V Y +I+ + A +F+ M
Sbjct: 76 YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135
Query: 466 EAR--IYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKA 522
+ D+ ++ +++ GL R + AF L E + E +++++ CKA
Sbjct: 136 SGGGCVPDVV-TFNSLLKGLCSGER--MSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKA 192
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGI 582
GRL++A R M+ P+ Y S + G A + + RK+ T G K
Sbjct: 193 GRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEAC----DCCRKMVTKGSKAD 248
Query: 583 KFEHNLVDAFLYALVKGGFFDAVMQVVE 610
+ V L KG +A Q++E
Sbjct: 249 AVAFSTVIGILCK--KGHAEEAQNQMIE 274
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL-DVGN 440
G DKA +L ++ G + + Y + CK R +A ++ +SS G + DV
Sbjct: 87 GELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVT 146
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
+++L++ + + AF LF M +A SY T++ GL + R + +E+V
Sbjct: 147 FNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV 206
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
E V + S + CKA R+ +A R+M+
Sbjct: 207 EKSCVP-DLVAYTSFVTGLCKANRVAEACDCCRKMV 241
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 162/440 (36%), Gaps = 69/440 (15%)
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
F +LG RN N AFA+ M K D C NS + L +
Sbjct: 238 FTYTSLILGHCRNHNLDL-AFAMFDRMVK---------------DGCDPNSVTYSTL-IN 280
Query: 202 EECCRIALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR 253
C L+E +D ++ P +Y L C S S+A +++ M G
Sbjct: 281 GLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS-SEAVELLGKMKKRGCV 339
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT 313
PN +F L + G E + L M G V Y++LI+ G E+A
Sbjct: 340 PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTI 399
Query: 314 ILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG 373
L G++ S +TY E++K F G+++
Sbjct: 400 FKWMLSHGSLP----STQTYNEIIKCFCLMGDIQ-------------------------- 429
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
KA I D+M G S + Y + YCK+ A +L+ + +G
Sbjct: 430 ------------KAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
L+ D Y LI + A SLF M E I +Y I+ G + +
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A ++VE + + +N +I F K + +A+ +M+ PN TY S I+G
Sbjct: 538 ALFWKMVESGNLP-SSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDG 596
Query: 554 YVTAEQYFSVLMMWHEIKRK 573
+ ++HE++++
Sbjct: 597 LCRNGRTGLAFKIFHEMEKR 616
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 150/361 (41%), Gaps = 11/361 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N + G C ++++A +++E M G++P+ ++ L ++ G E
Sbjct: 445 PNVITYNTLIYGYCKQ-GNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATS 503
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M E G S V Y+++I GY L ++ A + GN+ S +TY ++
Sbjct: 504 LFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSS----QTYNVMI 559
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
GF + ++ N K+ G++ + I G + A I EM
Sbjct: 560 SGFSKTNSISEAENF---CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616
Query: 398 GCSVGLGVYVPTLKAYCKEHRT--AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
L Y + C+E R AE L+ ++ G + +V Y L++
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCY 676
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A L M++ + + Y ++ G +N + E A + ++ ++ D+ ++
Sbjct: 677 EADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVE-SALNIFYSMDTLGFQLHLSDYKAL 735
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I A CK +E+A+ + M+ + ++ + L++G + + L + H ++ +
Sbjct: 736 ICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNC 795
Query: 576 T 576
T
Sbjct: 796 T 796
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 132/309 (42%), Gaps = 18/309 (5%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G+RP+ +F + + KG ++ + S + + Y+SLI G+ + NL+ A
Sbjct: 197 GIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLA 256
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE-AQK-LEPSGIVVDR 368
+ G D + TY ++ G G ++ +++ E QK +EP+
Sbjct: 257 FAMFDRMVKDG----CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVY---- 308
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+ ++S C + G S +A +L +M GC + + + ++ + A L
Sbjct: 309 TYTIPLVSLC-DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHK 367
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ + GL Y+ALI F++AF++F+ M +Y I+
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427
Query: 489 PELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+ D++++ P V +N++I+ +CK G L +A R L M +P+
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVIT----YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAW 483
Query: 546 TYLSLINGY 554
TY LI+G+
Sbjct: 484 TYTELISGF 492
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A + + + +SG++ + ++ +I Q A + + Y +Y +++
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
G NH +L A D +V+D + + ++++I+ C GRLE+A L M+ E
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKD-GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIE 304
Query: 542 PNDQTY 547
P TY
Sbjct: 305 PTVYTY 310
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 165/413 (39%), Gaps = 42/413 (10%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
K F+E RI + KP++ ++ C +SDA+ V M +P+ +
Sbjct: 279 KRFDEAYRILAKMENEGCKPDVITHTVLIQVLC-DAGRISDAKDVFWKMKKSDQKPDRVT 337
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ L + G + ++E+ + M G++ +V Y+++I ++G + A
Sbjct: 338 YITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF---- 393
Query: 319 GGGNMEQSDFSKE--TYCEVVKGFLQ---------------------NG-------NVKG 348
M+Q E +Y ++ GFL+ NG N G
Sbjct: 394 --DEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYG 451
Query: 349 LANLIIEA----QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG 404
+ I+A + ++ GIV D G ++ G A + E+ A G S
Sbjct: 452 KSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 511
Query: 405 VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM 464
Y +K K + EA ++ D+ + DV ++LI+ + A+ +F +
Sbjct: 512 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL 571
Query: 465 REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
+E + G+Y T++ GL + + + L+E+ +N+I+ CK G
Sbjct: 572 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS-NYPPNLITYNTILDCLCKNGA 630
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTD 577
+ DA L M P+ +Y ++I G V E+Y ++ ++K+ + D
Sbjct: 631 VNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 683
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 162/406 (39%), Gaps = 22/406 (5%)
Query: 222 ACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELES 280
+CN LE G V D +V + M V+ N +F L GL+ V L
Sbjct: 127 SCNYMLE-LMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVAL-P 184
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGF 340
+M E G Y+ L+ VK G A + + G + S TY ++ F
Sbjct: 185 VMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVP----SVRTYSVLMVAF 240
Query: 341 LQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
+ +V+ + L+ +EA ++P+ V ++ ++ D+A+ IL +M G
Sbjct: 241 GKRRDVETVLWLLREMEAHGVKPN--VYSYTICIRVLGQAKRF---DEAYRILAKMENEG 295
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
C + + ++ C R ++A + + S + D Y L++ + D QS
Sbjct: 296 CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVM 355
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
++ M+ D +Y ++ L + R DE+ + V + + +NS+I
Sbjct: 356 EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVP-EQYSYNSLISG 414
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
F KA R DA + M +PN T++ IN Y + + + + +K
Sbjct: 415 FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK------- 467
Query: 579 QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
KGI + +A L+ L K G +V + + M V D Y
Sbjct: 468 SKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITY 513
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 167/405 (41%), Gaps = 41/405 (10%)
Query: 183 FLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEK 242
++ C K S F +K+F + ++ N P++ A N+ ++ Y +A +
Sbjct: 515 MMIKCCSKASKFDEAVKIFYD----MIENNC---VPDVLAVNSLID-TLYKAGRGDEAWR 566
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+ + + + P + ++ L +G ++++ L M + ++ Y++++
Sbjct: 567 IFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLC 626
Query: 303 KLGNLESA-----SRTILLCLGG---------GNMEQSDFSKE----------------T 332
K G + A S T C+ G +++ +++ T
Sbjct: 627 KNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYAT 686
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
C ++ F++ G +K A II+ L+P G DRS ++ + +K+ +
Sbjct: 687 LCTILPSFVKIGLMKE-ALHIIKDYFLQP-GSKTDRSSCHSLMEGILKKAGIEKSIEFAE 744
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+ + G ++ P +K CK+ + EA +LV S G+ L G Y++LI +
Sbjct: 745 IIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDEN 804
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
A LF +M+E + +Y ++ + ++ R E M +E+ E +
Sbjct: 805 LIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM-HRKGYESTYVTY 863
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
N+II K+ RLE A ++ F P TY L++G + A
Sbjct: 864 NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 908
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 149/359 (41%), Gaps = 13/359 (3%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+ + + G C VSDA +++ M +G RP+ ++ + +
Sbjct: 152 EPDRVTIGSLVNGFCRR-NRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDAL 210
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
+ + G +V Y++L++G G A+R + +M + + TY
Sbjct: 211 DFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLR------DMIKRKITPNVITYS 264
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ F++NG V + E ++ +V S +I+ D+A+ + D M
Sbjct: 265 ALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYS---SLINGLCLHDRIDEANQMFDLM 321
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ GC + Y + +CK R + +L +S GL + Y+ LI+ D
Sbjct: 322 VSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDV 381
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A F M + +Y ++ GL +N E A + E ++ +++ + +
Sbjct: 382 DKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLE-KALVIFEDMQKSEMDLDIVTYTT 440
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+I CK G++EDA + +P+ TY ++++G T V ++ ++K++
Sbjct: 441 VIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQE 499
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 14/241 (5%)
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A S++D+M G + Y + + CK R +A +I G++ +V Y AL+
Sbjct: 174 AVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVN 233
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DP 503
S + A L RDM + +I +Y ++ ++N + +E+V DP
Sbjct: 234 GLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDP 293
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+ ++S+I+ C R+++A + M+ P+ +Y +LING+ A++
Sbjct: 294 DIVT----YSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDG 349
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWK 623
+ ++ RK+S Q+G+ + + + G D + + V D W
Sbjct: 350 MKLF----RKMS---QRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWT 402
Query: 624 Y 624
Y
Sbjct: 403 Y 403
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 124/325 (38%), Gaps = 55/325 (16%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEE 203
T L+ + N+ A L++ M K R P + L+D KN + ++FEE
Sbjct: 227 TYTALVNGLCNSGRWNDAARLLRDMIK-RKITPNVITYSALLDAFVKNGKVLEAKEIFEE 285
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
R+++D P+I ++ + G C + +A ++ + M G P+ S+ L
Sbjct: 286 MVRMSID-------PDIVTYSSLINGLCLH-DRIDEANQMFDLMVSKGCFPDVVSYNTLI 337
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+ E ++L M++ G + V Y++LI G+ ++G+++ A M
Sbjct: 338 NGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFF------SQM 391
Query: 324 EQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNL 381
+ S + TY ++ G N
Sbjct: 392 DSFGVSPDIWTYNILLGGLCDN-------------------------------------- 413
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNY 441
GL +KA I ++M + + Y ++ CK + +A L +S GL+ D+ Y
Sbjct: 414 GLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTY 473
Query: 442 DALIEASITSQDFQSAFSLFRDMRE 466
++ T +L+ M++
Sbjct: 474 TTMMSGLCTKGLQHEVEALYTKMKQ 498
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 181/449 (40%), Gaps = 36/449 (8%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF-GFLAYLYALKGLQEK 274
+ P++ N + G C + V A ++ M G P++ +F F+ L + + E
Sbjct: 426 LSPDVVTYNTLIHGLC-EVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEA 484
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
LESL + +++ Y++LI GY K G +E A+ L E+ + T+
Sbjct: 485 HQILESLKEKHVKANEHA-YTALIDGYCKAGKIEHAASLFKRMLA----EECLPNSITFN 539
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ G + G V+ L+ + K + + ++ ++ + D+A+ IL+ +
Sbjct: 540 VMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNI---LVEEVLKEYDFDRANEILNRL 596
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ G + Y +KAYC + R EA ++V+ I + G+ LD Y+ LI A
Sbjct: 597 ISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLL 656
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGL-MENHRPELMAAF-LDEVVEDPRVEVKTHDW 512
SAF + R M +Y +M L +E H+ E LD + + V+ T W
Sbjct: 657 DSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVD-NTDIW 715
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
+ I +M PN TY LING + ++H ++
Sbjct: 716 SKIDFGITTV--------LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMR- 766
Query: 573 KISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENH 632
+ GI + ++ L + K G F + +++ E A +E++
Sbjct: 767 ------EGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECS--------HLAHLESY 812
Query: 633 KKLKVAKLRKRNFKKMEALIAFKNWAGLN 661
K L + N +K EA+ G N
Sbjct: 813 KLLICGLFEQMNKEKAEAVFCSLLRCGYN 841
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 148/374 (39%), Gaps = 46/374 (12%)
Query: 290 QMVFYSSLISGYVKLGNLESASR---TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV 346
++ +++++ Y KLGN+ A IL C G ++ TY +V G+ +N +V
Sbjct: 188 NLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLF-------TYTSLVLGYCRNDDV 240
Query: 347 KGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD---EMNACGCSVGL 403
+ + V+ R + L + K H L+ M GC +
Sbjct: 241 ERACGVFC----------VMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTV 290
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y + A C+ R EA L ++ G + +V Y LI+ A + +
Sbjct: 291 RTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNE 350
Query: 464 MREARIYD-------LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
M E + L GSY G+ME+ A + ++E +V +N +I
Sbjct: 351 MVEKGVAPSVVPFNALIGSYCK--RGMMED------AVGVLGLMESKKVCPNVRTYNELI 402
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
FC+ ++ A L +M+ + P+ TY +LI+G V+ + R +
Sbjct: 403 CGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEV----GVVDSASRLFRLMIR 458
Query: 577 DGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLK 636
DG ++ N AF+ L + G Q++E +E V ++ Y A ++ + K
Sbjct: 459 DGFSPDQWTFN---AFMVCLCRMGRVGEAHQILESLKEKHVKANEHAY-TALIDGYCKAG 514
Query: 637 VAKLRKRNFKKMEA 650
+ FK+M A
Sbjct: 515 KIEHAASLFKRMLA 528
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 177/450 (39%), Gaps = 37/450 (8%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T +TL+ + A L + M ++ + + F+V +CR A ++
Sbjct: 429 DVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAH-QI 487
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
E +L E +K N +A A ++G C + A + + M PN +F
Sbjct: 488 LE-----SLKEK--HVKANEHAYTALIDGYCKA-GKIEHAASLFKRMLAEECLPNSITFN 539
Query: 261 FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGG 320
+ +G + + L M +F + Y+ L+ +K + + A+ + +
Sbjct: 540 VMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISS 599
Query: 321 GNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVN 380
G TY +K + G ++ ++I K++ G+++D + +I+A
Sbjct: 600 GYQPNV----VTYTAFIKAYCSQGRLEEAEEMVI---KIKNEGVLLDSFIYNLLINAYGC 652
Query: 381 LGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV-MDISSSGLQLDVG 439
+GL D A +L M GC Y +K E E + V +D+S + + +D
Sbjct: 653 MGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNT 712
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDE 498
+ + I+ IT+ LF M E +Y ++ GL + R L AF L
Sbjct: 713 DIWSKIDFGITT-------VLFEKMAECGCVPNLNTYSKLINGLCKVGR--LNVAFSLYH 763
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV--- 555
+ + + NS++ + CK G +A L M+ + ++Y LI G
Sbjct: 764 HMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQM 823
Query: 556 ---TAEQYFSVLMM----WHEIKRKISTDG 578
AE F L+ + E+ K+ DG
Sbjct: 824 NKEKAEAVFCSLLRCGYNYDEVAWKVLIDG 853
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 128/339 (37%), Gaps = 50/339 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P + +CNA + LQ A M + PN + + + G EK +E
Sbjct: 277 PRVESCNAYISAS-ISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIE 335
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M GFS + Y++LI+GY G L S + +L ME++ + T+
Sbjct: 336 VFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKIL------MEKNGVRPDDVTFNT 389
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEM 394
++ GF + G + AN I K + VV ++ + +I+ +G S+ + DEM
Sbjct: 390 LINGFCRGGKLHE-ANKIFSEMK---ANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEM 445
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + Y + C E RT +A LV ++ L + + ALI ++
Sbjct: 446 LRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNS 505
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
+ AF L++ M I +G N+ H +
Sbjct: 506 ERAFQLYKSM--------------IRSGCHPNY----------------------HTFKM 529
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+I FCK + A +R M P+ T L G
Sbjct: 530 LISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRG 568
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 117/287 (40%), Gaps = 14/287 (4%)
Query: 216 MKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+ PN+Y N + C +G + A +V + M +G P +S+ L Y KGL
Sbjct: 310 ISPNVYTLNMVMCAFCKWG--KLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNS 367
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET-- 332
++L+ LM + G V +++LI+G+ + G L A++ M+ +D T
Sbjct: 368 GMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIF------SEMKANDVVPNTIT 421
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++ G+ Q GN + L E + +GI D +I G + KA ++
Sbjct: 422 YNTLINGYSQVGNSEMGGRLHDEMLR---NGIKADILTYNALILGLCMEGRTKKAAYLVK 478
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
E++ + + C + A QL + SG + + LI ++
Sbjct: 479 ELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNE 538
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
DF A + R+M E I + + GL + + EL E+
Sbjct: 539 DFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEM 585
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/247 (18%), Positives = 94/247 (38%), Gaps = 8/247 (3%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++ A G +KA + M G S + Y + YC + +L + + +G
Sbjct: 320 VMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNG 379
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ D ++ LI A +F +M+ + +Y T++ G + E+
Sbjct: 380 VRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGG 439
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
DE++ + ++ +N++I C GR + A ++ + PN T+ +LI G
Sbjct: 440 RLHDEMLRN-GIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITG 498
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
+ ++ + R G ++ + K FD ++VV +
Sbjct: 499 QCVRKNSERAFQLYKSMIR-------SGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMS 551
Query: 614 EMKVFVD 620
E + D
Sbjct: 552 ERSIAPD 558
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 58/156 (37%), Gaps = 36/156 (23%)
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
C V+ K Y + + A + + G V + +A I ASI+ Q A
Sbjct: 240 CDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIAL 299
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
+ +R+M+ RI P V + N ++ A
Sbjct: 300 TFYREMQRYRI--------------------------------SPNV----YTLNMVMCA 323
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
FCK G+LE A +RM + F P +Y +LI GY
Sbjct: 324 FCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGY 359
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 12/274 (4%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
+ ++G +V Y++L++GY++LG+L+ R L G Q D TY ++ G
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVY--TYSVLINGLC 223
Query: 342 QNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
+ + G L E + L P+G+ + C N G D A I +M +
Sbjct: 224 KESKMDGANELFDEMLVKGLVPNGVTFTTLID----GHCKN-GRVDLAMEIYKQMLSQSL 278
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
L Y + CK+ +A L+ ++S GL+ D Y LI+ D +AF
Sbjct: 279 LPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFE 338
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAF 519
+ M + I +Y +++GL + R L E++ ++ T + II+ F
Sbjct: 339 HRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS-VGLKPDTGTYTMIINEF 397
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
CK G + + L+ M P+ TY L+NG
Sbjct: 398 CKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 121/321 (37%), Gaps = 39/321 (12%)
Query: 178 ELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKP-NIYACNAALEGCCYGLQS 236
+LW F D CRK + LK F+ +E L+ P ++Y N + C
Sbjct: 102 KLWVPF--DTCRKVLEHLMKLKYFKLVWGF-YEEILECGYPASLYFFNILMHRFCKD-GD 157
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ A+ V + ++ G+RP+ S+ L Y G ++ L+S M G + YS
Sbjct: 158 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 217
Query: 297 LISGYVKLGNLESASRTI----------------LLCLGGGNMEQSDFSKE--------- 331
LI+G K ++ A+ L G + D + E
Sbjct: 218 LINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 332 ------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
TY ++ G + G++K +LI E + G+ D+ +I C G D
Sbjct: 278 LLPDLITYNTLIYGLCKKGDLKQAHDLIDE---MSMKGLKPDKFTYTTLIDGCCKEGDLD 334
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
A M + Y + C+E R+ +A +++ ++ S GL+ D G Y +I
Sbjct: 335 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMII 394
Query: 446 EASITSQDFQSAFSLFRDMRE 466
D L ++M
Sbjct: 395 NEFCKKGDVWKGSKLLKEMHR 415
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
D+ + LI A + S + A +R RE +++ + ++ LM+ +L+ F
Sbjct: 71 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+E++E + +N ++H FCK G + A+ + P+ +Y +L+NGY+
Sbjct: 131 EEILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 162/440 (36%), Gaps = 69/440 (15%)
Query: 142 FQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
F +LG RN N AFA+ M K D C NS + L +
Sbjct: 238 FTYTSLILGHCRNHNLDL-AFAMFDRMVK---------------DGCDPNSVTYSTL-IN 280
Query: 202 EECCRIALDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR 253
C L+E +D ++ P +Y L C S S+A +++ M G
Sbjct: 281 GLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS-SEAVELLGKMKKRGCV 339
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRT 313
PN +F L + G E + L M G V Y++LI+ G E+A
Sbjct: 340 PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTI 399
Query: 314 ILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG 373
L G++ S +TY E++K F G+++
Sbjct: 400 FKWMLSHGSLP----STQTYNEIIKCFCLMGDIQ-------------------------- 429
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
KA I D+M G S + Y + YCK+ A +L+ + +G
Sbjct: 430 ------------KAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
L+ D Y LI + A SLF M E I +Y I+ G + +
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
A ++VE + + +N +I F K + +A+ +M+ PN TY S I+G
Sbjct: 538 ALFWKMVESGNLP-SSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDG 596
Query: 554 YVTAEQYFSVLMMWHEIKRK 573
+ ++HE++++
Sbjct: 597 LCRNGRTGLAFKIFHEMEKR 616
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 150/361 (41%), Gaps = 11/361 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
PN+ N + G C ++++A +++E M G++P+ ++ L ++ G E
Sbjct: 445 PNVITYNTLIYGYCKQ-GNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATS 503
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M E G S V Y+++I GY L ++ A + GN+ S +TY ++
Sbjct: 504 LFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSS----QTYNVMI 559
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
GF + ++ N K+ G++ + I G + A I EM
Sbjct: 560 SGFSKTNSISEAENF---CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616
Query: 398 GCSVGLGVYVPTLKAYCKEHRT--AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
L Y + C+E R AE L+ ++ G + +V Y L++
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCY 676
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A L M++ + + Y ++ G +N + E A + ++ ++ D+ ++
Sbjct: 677 EADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVE-SALNIFYSMDTLGFQLHLSDYKAL 735
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIS 575
I A CK +E+A+ + M+ + ++ + L++G + + L + H ++ +
Sbjct: 736 ICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNC 795
Query: 576 T 576
T
Sbjct: 796 T 796
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 132/309 (42%), Gaps = 18/309 (5%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
G+RP+ +F + + KG ++ + S + + Y+SLI G+ + NL+ A
Sbjct: 197 GIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLA 256
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE-AQK-LEPSGIVVDR 368
+ G D + TY ++ G G ++ +++ E QK +EP+
Sbjct: 257 FAMFDRMVKDG----CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVY---- 308
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
+ ++S C + G S +A +L +M GC + + + ++ + A L
Sbjct: 309 TYTIPLVSLC-DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHK 367
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ + GL Y+ALI F++AF++F+ M +Y I+
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427
Query: 489 PELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+ D++++ P V +N++I+ +CK G L +A R L M +P+
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVIT----YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAW 483
Query: 546 TYLSLINGY 554
TY LI+G+
Sbjct: 484 TYTELISGF 492
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A + + + +SG++ + ++ +I Q A + + Y +Y +++
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
G NH +L A D +V+D + + ++++I+ C GRLE+A L M+ E
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKD-GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIE 304
Query: 542 PNDQTY 547
P TY
Sbjct: 305 PTVYTY 310
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 17/314 (5%)
Query: 227 LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG 286
++ C G + V+DA ++ M G+ PN +F L ++ + L ++M + G
Sbjct: 154 IDSLCKG-KFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKG 212
Query: 287 FSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE--VVKGFLQNG 344
+V Y +++ GY + + A + M Q +C ++ G +
Sbjct: 213 VKPNVVTYGAIMDGYCLVNQVNKALNIFNV------MVQEGVEPNVWCYNIIINGLCKKK 266
Query: 345 NVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVG 402
V NL E +K+ P VV ++ +I LG + ++DEM + G +V
Sbjct: 267 RVDEAMNLFKEMHWKKINPD--VVTYNI---LIDGLCKLGKISTSLELVDEMRSIGKTVD 321
Query: 403 LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFR 462
+ Y L A CK H +A LV +I G+Q +V Y LI+ + A+ +F+
Sbjct: 322 IITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQ 381
Query: 463 DMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKA 522
++ + +Y ++ GL + + A L +ED + +II+A +
Sbjct: 382 EILTEGYHITVWTYNVMINGLCKKGLFDEALALLSR-MEDNACIPDAVSYETIIYALSEK 440
Query: 523 GRLEDAKRTLRRMI 536
G + L MI
Sbjct: 441 GETVKTNKLLCAMI 454
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 167/418 (39%), Gaps = 55/418 (13%)
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG-NLESASRTIL---LCLGGGNMEQ 325
G++ IV L LMN + + + F S+++ +K+G S + T L +CL G E
Sbjct: 40 GIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEA 99
Query: 326 SDFSKETYC------EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
F +V L NG K + Q L + + D + II +
Sbjct: 100 LLFHDHVVAHGFKLDQVSYAILMNGLCK-MGETRAAMQMLRKTWVNADVVMYSTIIDSLC 158
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
A+ + EM A G + + + A CK+ + +A L+ + G++ +V
Sbjct: 159 KGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVV 218
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR----------- 488
Y A+++ A ++F M + + Y I+ GL + R
Sbjct: 219 TYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEM 278
Query: 489 ------PELMA--AFLD------------EVVEDPRVEVKTHD---WNSIIHAFCKAGRL 525
P+++ +D E+V++ R KT D +NS++HA CK L
Sbjct: 279 HWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHL 338
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFE 585
+ A ++ + +PN TY +LI+G + +++ E I T+G +
Sbjct: 339 DQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQE----ILTEGYHITVWT 394
Query: 586 HNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ---AFMENHKKLKVAKL 640
+N++ + L K G FD + ++ + ++ D Y+ A E + +K KL
Sbjct: 395 YNVM---INGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKL 449
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 170/399 (42%), Gaps = 62/399 (15%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL-----------AYL 265
+P+ N ++G C Q + A + + LG ++ S+G L A L
Sbjct: 137 EPDTITLNTFIKGFCLKGQ-IHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAAL 195
Query: 266 YALKGLQEKIVELESLM---------------NEFGFSSQMV---------FYSSLISGY 301
L+ + K+V+L+ +M + F S+MV YS+LISG+
Sbjct: 196 ELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGF 255
Query: 302 VKLGNLESASRTILLCLGGGN-MEQSDFSKETYC--EVVKGFLQNGNVK----GLANLII 354
+G L+ A +G N M + + + Y +V F + G VK GLA ++
Sbjct: 256 CIVGKLKDA-------IGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMM- 307
Query: 355 EAQKLEPSGIVVDRSV--GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
Q ++P IV S+ G+ +++ VN+ A SIL+ M+ G + + Y +
Sbjct: 308 -KQGIKPD-IVTYNSLMDGYCLVNE-VNM-----AKSILNTMSHRGVTATVRSYNIVING 359
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
+CK +A +L ++ + +V Y++LI+ S A L M +
Sbjct: 360 FCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPD 419
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+Y +I+ L +NH + A L ++ +D + + + +I CK GRLEDA+
Sbjct: 420 IITYSSILDALCKNHLVDKAIALLIKL-KDQGIRPNMYTYTILIDGLCKGGRLEDARNIF 478
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
++ + TY +I G+ + + L + ++K
Sbjct: 479 EDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMK 517
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 108/529 (20%), Positives = 200/529 (37%), Gaps = 67/529 (12%)
Query: 137 PKLLDFQTVHTLLGS--MRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNF 194
P+ F +H+ S N N A +L C+ + P +G L + K+ ++
Sbjct: 28 PENTHFYFIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLV-KSKHY 86
Query: 195 VAFLKVFEECCRIALDENLDF--MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
L +F++ +++ +KPN N L C L + A V+ + +G
Sbjct: 87 HTVLSLFQK---------MEYRGIKPNFVNFNI-LINCFCQLGLIPFAFSVLAKILKMGY 136
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
P+ + + LKG + + + GF V Y +LI+G K+G +A
Sbjct: 137 EPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALE 196
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
LL G + Q D Y ++ ++ NV +L E S +V S
Sbjct: 197 --LLRRVDGKLVQLDVV--MYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYS--- 249
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
+IS +G A + ++M + + + + + A+CKE R EA + +
Sbjct: 250 ALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQ 309
Query: 433 GLQLDVGNYDALIE------------------------ASITSQDF-----------QSA 457
G++ D+ Y++L++ A++ S + A
Sbjct: 310 GIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQA 369
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
LF++M +I+ +Y +++ GL ++ R +D ++ D + ++SI+
Sbjct: 370 MKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELID-LMHDRGQQPDIITYSSILD 428
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTD 577
A CK ++ A L ++ PN TY LI+G + E R I D
Sbjct: 429 ALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRL--------EDARNIFED 480
Query: 578 -GQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYK 625
KG N + G FD + ++ K ++ D Y+
Sbjct: 481 LLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYE 529
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 116/287 (40%), Gaps = 12/287 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++Y N ++ C V +A+ + M G++P+ ++ L Y L
Sbjct: 276 INPDVYTFNILVDAFCKE-GRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMA 334
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+ + M+ G ++ + Y+ +I+G+ K+ ++ A + + +Q + TY
Sbjct: 335 KSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKL----FKEMHHKQIFPNVITYNS 390
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ G ++G + LI + + +P I I+ A L DKA ++L +
Sbjct: 391 LIDGLCKSGRISYALELIDLMHDRGQQPDIITYS-----SILDALCKNHLVDKAIALLIK 445
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
+ G + Y + CK R +A + D+ G L V Y +I+ +
Sbjct: 446 LKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGL 505
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
F A SL M++ +Y I+ L + + L E++
Sbjct: 506 FDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMI 552
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 138/330 (41%), Gaps = 20/330 (6%)
Query: 253 RPNESSFGFLAYLYAL-KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESAS 311
RP+ ++ L Y L + +E + + +FG + + ++ ++ G K G + +A
Sbjct: 151 RPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAM 210
Query: 312 RTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVG 371
+ + FS L NG VK A ++I+A L ++
Sbjct: 211 DHFEAVRRSMPVSAATFS----------ILINGLVK--AGMMIQAHSLAQETTTNGCTID 258
Query: 372 FGIISACVNLGLSDK----AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+A VN +K A ++++++ A GC+ + Y L CK R EA L+
Sbjct: 259 IHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 318
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
I +G DV Y +LI+ + A+ LF++M + Y ++ GL++
Sbjct: 319 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTG 378
Query: 488 R-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
+ P+ + + +V T +++I KAGR+ A R + M PN+
Sbjct: 379 KIPQASSVYKTMTSHGCVPDVVT--LSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVV 436
Query: 547 YLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
Y +LI+G A + L M ++K+ T
Sbjct: 437 YSALIHGLCKARKMDCALEMLAQMKKAFCT 466
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 131/327 (40%), Gaps = 22/327 (6%)
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
K +QE + +E + G + + Y++L++G K+G LE A + + G
Sbjct: 273 KKIQEAVALMEKITAN-GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV-- 329
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKL----EPSGIVVDRSVGFGIISACVNLGLS 384
TY ++ G G EA KL G+ +D +I + G
Sbjct: 330 --VTYTSLIDGL-------GKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKI 380
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
+A S+ M + GC + + K R A ++ + + GL + Y AL
Sbjct: 381 PQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 440
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
I ++ A + M++A +Y ++ GL ++ E AF DE++E
Sbjct: 441 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE-AG 499
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVL 564
+ + +N +I CKAG + A L M +F Y SL++G + +
Sbjct: 500 CKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGLCKSGKLEGGC 554
Query: 565 MMWHEIKRKISTDGQKGIKFEHNLVDA 591
M++HE++R + Q + +L A
Sbjct: 555 MLFHEMERSGVANSQTRTRLIFHLCKA 581
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 141/345 (40%), Gaps = 26/345 (7%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
+ + +A ++E ++ G P +++ L G E+ ++L + + G + +V Y
Sbjct: 273 KKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 332
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC--EVVKGFLQNGNVKGLANL 352
+SLI G K A + M + +T C +++G LQ G + +++
Sbjct: 333 TSLIDGLGKEKRSFEAYKLF------KEMASRGLALDTVCYTALIRGLLQTGKIPQASSV 386
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ + G V D +I G A I M A G + VY +
Sbjct: 387 Y---KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 443
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
CK + A +++ + + D Y+ LI+ S D ++A + F +M EA
Sbjct: 444 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 503
Query: 473 KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
+Y +++GL + + LD++ V ++S++ CK+G+LE
Sbjct: 504 VYTYNILISGLCKAGNTDAACGVLDDMSSSRFV------YSSLVDGLCKSGKLEGGC--- 554
Query: 533 RRMIFLQFE----PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
M+F + E N QT LI A + + +++ I+++
Sbjct: 555 --MLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKE 597
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 153/376 (40%), Gaps = 50/376 (13%)
Query: 205 CRIA-LDENLDFMK--------PNIYACNAALEGCCYGLQSVS-DAEKVIETMSVLGVRP 254
C++ L+E +D ++ P++ + ++G G + S +A K+ + M+ G+
Sbjct: 305 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG--LGKEKRSFEAYKLFKEMASRGL-- 360
Query: 255 NESSFGFLAYLYALKGLQE--KIVELESL---MNEFGFSSQMVFYSSLISGYVKLGNLES 309
+ + Y ++GL + KI + S+ M G +V S++I G K G + +
Sbjct: 361 ---ALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGA 417
Query: 310 ASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
A R +ME + Y ++ G + + ++ + +K
Sbjct: 418 AVRIF------KSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK----AFCTP 467
Query: 368 RSVGFGI-ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
++ + I I G + A + DEM GC + Y + CK T A ++
Sbjct: 468 DTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVL 527
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
D+SSS Y +L++ S + LF +M + + + + I N
Sbjct: 528 DDMSSSRFV-----YSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKAN 582
Query: 487 HRPE---LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
E L A E + P + +NSII A K+G++ + + + M ++P+
Sbjct: 583 RVDEAVSLFNAIRKEGMPHP------YAYNSIISALIKSGKVNEGQAVYQEMTRW-WKPD 635
Query: 544 DQTYLSLINGYVTAEQ 559
TY +L+NG + A +
Sbjct: 636 RVTYNALLNGMIGANR 651
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 175/442 (39%), Gaps = 63/442 (14%)
Query: 163 ALVKCMFKNRYFMPFELWGGFLVDICRKNSN-------FVAFLKVFEECCRI-----ALD 210
++VK + K R F +WG L++ RK + FV ++ F + LD
Sbjct: 139 SMVKILSKMRQFGA--VWG--LIEEMRKENPELIEPELFVVLIRRFASANMVKKAVEVLD 194
Query: 211 ENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALK 269
E + +P+ Y L+ C SV DA KV E M + PN F L Y + +
Sbjct: 195 EMPKYGFEPDEYVFGCLLDALCKN-GSVKDASKVFEDMRE-KIPPNLRYFTSLLYGWCRE 252
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFS 329
G + E+ M E G +V +++L+SGY G + A + +M + +
Sbjct: 253 GKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLL------NDMRKRGYE 306
Query: 330 KETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHS 389
C V K + + ++E G D +IS G+ DK +S
Sbjct: 307 PNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYS 366
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+LD+M G Y+ L A+ K+ + E +L+ + G D+ Y+ +I +
Sbjct: 367 VLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLAC 426
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG------LME--NHRPELMA-------- 493
++ + A L+ +M + ++ ++ G L+E +H E+++
Sbjct: 427 NFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSHFKEMVSRGIFSAPQ 486
Query: 494 -----AFLDEVVEDPRVEVKTHDWNSI-----------------IHAFCKAGRLEDAKRT 531
+ L+ ++ D ++E+ W+ I IHA G +++A
Sbjct: 487 YGTLKSLLNTLLRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALFAKGHVKEACSY 546
Query: 532 LRRMIFLQFEPNDQTYLSLING 553
M+ + P TY+ L+ G
Sbjct: 547 CLDMMEMDLMPQPNTYVKLMKG 568
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 18/249 (7%)
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGII--SACVNLGLSDK 386
E + +++ F VK ++ E K EP V FG + + C N + D
Sbjct: 171 ELFVVLIRRFASANMVKKAVEVLDEMPKYGFEPDEYV------FGCLLDALCKNGSVKD- 223
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A + ++M L + L +C+E + EA ++++ + +GL+ D+ + L+
Sbjct: 224 ASKVFEDMRE-KIPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLS 282
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM---ENHRPELMAAFLDEVVEDP 503
+ A+ L DMR+ R Y+ + T++ + E E M F++ +E
Sbjct: 283 GYAHAGKMADAYDLLNDMRK-RGYEPNANCYTVLIQALCRTEKRMDEAMRVFVE--MERY 339
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
E + ++I FCK G ++ L M P+ TY+ ++ + EQ+
Sbjct: 340 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEEC 399
Query: 564 LMMWHEIKR 572
L + ++K+
Sbjct: 400 LELIEKMKQ 408
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 147/364 (40%), Gaps = 16/364 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN++ + G C ++ AE ++ M G+ PN +++ L + +G
Sbjct: 323 KPNVHTYTVMIGGYCKE-GKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAF 381
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
EL + M GF + Y++LI G K G ++ A + + + N + K TY +
Sbjct: 382 ELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRM----ANNQGLQLDKVTYTVM 437
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ + G++ +L ++ +G D +I+ +++ + D+ A
Sbjct: 438 ITEHCKQGHITYALDLF---NRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLA 494
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
Y + YCK ++ A ++ + +G Q D Y ALI +
Sbjct: 495 IELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEE 554
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A +L+ M + R+ + + +T+ + + + LD + D R K H N ++
Sbjct: 555 ARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRL--DKR--RKNHTVNVLV 610
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
G +EDA L++ + + + Y S IN ++Y + EI KIS+
Sbjct: 611 RKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFINSCYANKKY----ALATEISEKISS 666
Query: 577 DGQK 580
K
Sbjct: 667 SQDK 670
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 134/316 (42%), Gaps = 9/316 (2%)
Query: 239 DAEKVIETMSVLGVRPNESSF-GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
D ++ M +G PN ++ ++ L +++ LE ++ + G + ++SL
Sbjct: 238 DVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAK-GLKPNVYTHTSL 296
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
I+G K+G E A R L + + + + TY ++ G+ + G LA +
Sbjct: 297 INGLCKIGWTERAFRLFLKLIKSSSYKPN---VHTYTVMIGGYCKEGK---LARAEMLLG 350
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
++ G+ + + +IS G + A ++++M G + Y + CK+
Sbjct: 351 RMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKG 410
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+ EA +++ ++ GLQLD Y +I A LF M E + +Y
Sbjct: 411 KIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYT 470
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
T++ + + E D+ + V K + S+I +CK G+ A R RM+
Sbjct: 471 TLIARYCQQRQMEESQKLFDKCLAIELVPTK-QTYTSMIAGYCKVGKSTSALRVFERMVQ 529
Query: 538 LQFEPNDQTYLSLING 553
+ + TY +LI+G
Sbjct: 530 NGCQADSITYGALISG 545
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 114/274 (41%), Gaps = 11/274 (4%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G++ D +I C G ++ ++L M G + ++ +C++ R +
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
++L + G +V NY A I+ + AF + +M + ++ +++ G
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
L + E ++++ + H + +I +CK G+L A+ L RM+ P
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 359
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL--VDAFLYALVKGG 600
N TY +LI+G+ + + ++++R+ F+ N+ +A + L K G
Sbjct: 360 NTNTYTTLISGHCKEGSFNCAFELMNKMRRE---------GFQPNIYTYNALIDGLCKKG 410
Query: 601 FFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKK 634
+V+ + + +DK Y E+ K+
Sbjct: 411 KIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQ 444
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/356 (19%), Positives = 149/356 (41%), Gaps = 14/356 (3%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ + A + GCC + + + + ++ M G + ++ + ++ KG + E
Sbjct: 183 PDARSFRALIVGCCRDGR-MEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSE 241
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
L M E G +V Y++ I G K ++ A + + G ++ + + T+ ++
Sbjct: 242 LFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKG-LKPNVY---THTSLI 297
Query: 338 KGFLQNGNVKGLANL---IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
G + G + L +I++ +P+ V +V +I G +A +L M
Sbjct: 298 NGLCKIGWTERAFRLFLKLIKSSSYKPN--VHTYTV---MIGGYCKEGKLARAEMLLGRM 352
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + Y + +CKE A +L+ + G Q ++ Y+ALI+
Sbjct: 353 VEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKI 412
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
Q A+ + R + K +Y ++T + + + E+ H + +
Sbjct: 413 QEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENG-CHPDIHTYTT 471
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+I +C+ ++E++++ + + ++ P QTY S+I GY + S L ++ +
Sbjct: 472 LIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERM 527
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 153/399 (38%), Gaps = 25/399 (6%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
EN M P + NA + G Q V A+ M +G+ P+ ++ + Y G
Sbjct: 341 ENEGIM-PTLVTYNAIIHGLLKSEQ-VEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAG 398
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
++ + L + G + ++ Y++LI GY +LG LE A R L +EQ F
Sbjct: 399 NLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARR-----LKEEMVEQGCFPD 453
Query: 331 E-TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKA 387
TY ++ G + N+ E ++ L+P + + +I LG + KA
Sbjct: 454 VCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELI-----LGDTHKA 508
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ + M G Y + CK +A L M + S GLQ D Y LI A
Sbjct: 509 FQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHA 568
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVE 506
A L M + +Y ++ R L +A+ + D +E
Sbjct: 569 HCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCR--RGNLYSAYGWFRKMLDVGIE 626
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+N +IHA C+ GR A M+ PN TY LI+G + + +
Sbjct: 627 PNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRL 686
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAV 605
+ E+ Q GI ++ +A KG + A+
Sbjct: 687 YFEMH-------QNGIPPDYCTHNALFKGFDKGHMYHAI 718
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 144/376 (38%), Gaps = 47/376 (12%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ CN L D V M L + P ++ L + +G +++
Sbjct: 204 VAPDVRDCNCVLR-VLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262
Query: 276 VELESLMNEFGFSSQM--VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD-FSKET 332
L M G + V Y+ +IS + G+LE+A++ + +M S S T
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLV------DSMRLSKKASSFT 316
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++ L+ G V+ + L +E +E GI+ II + + A
Sbjct: 317 YNPLITALLERGFVQKVEALQME---MENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFA 373
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM A G L Y L YCK EA L+ D+ +GL V Y+ LI+
Sbjct: 374 EMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 433
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTG-----------------LMENHRPELMA-- 493
+ A L +M E + +Y +M G L + +P+ A
Sbjct: 434 GLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYN 493
Query: 494 --------------AF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL 538
AF L EV+ + T +N II CK G L+DAK +M+
Sbjct: 494 TRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSD 553
Query: 539 QFEPNDQTYLSLINGY 554
+P+ TY LI+ +
Sbjct: 554 GLQPDCITYTCLIHAH 569
>gi|326493764|dbj|BAJ85344.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 158/372 (42%), Gaps = 42/372 (11%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P ++ CN L G V DA K+ + M+ G+RP SF + +G E+I
Sbjct: 229 VQPQVHVCNRVL-GALTAAGYVEDALKLFDEMAESGIRPMPVSFAIIVRALGQEGKPERI 287
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
+E+ M + + Y++L+ V+ G++E R + +G +E + Y
Sbjct: 288 LEMIGRMRDEVCRPDVFVYTTLVKTMVRRGHMEGCIR-VWEEMGRDGVEPDSMA---YAT 343
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+V+G G V+ A L + + G++VDR V ++ V G +L +M
Sbjct: 344 MVEGLCNAGMVEKAAKLF---EGMRKKGLLVDRIVYASLVHGYVAAGRVGDGCRVLKDMV 400
Query: 396 ACGCSVGLGVYVPTLKAYC------KEHR------------TAE-ATQLVMDISSSGLQL 436
G L Y + C K H+ +AE +QL++ + +G +
Sbjct: 401 DAGYRADLKTYNILIGGLCGIGLEDKAHKMFQIVLQEDLVPSAETVSQLLVCYADNGDMV 460
Query: 437 D-VGNYDALIEASITSQDFQSAF-SLF--RDMREARIYDL------KGS-----YLTIMT 481
+ G D L+E S+ + +F F LF +D RE + ++ KG Y ++
Sbjct: 461 NFFGLVDKLVELSLPAVEFLVDFLRLFASKDGRELKAVEVFKTLRQKGYCSVNFYNILIE 520
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
L++ E +E+ + E ++ ++ +I F G +E+A M+ ++
Sbjct: 521 NLLKIKEREKALLLFEEMKDSDDCEPESCTYSLMIPCFVDEGNIEEACSCYNSMMKAEWI 580
Query: 542 PNDQTYLSLING 553
P+ Y SL+ G
Sbjct: 581 PSLSAYRSLVKG 592
>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g19290
gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 154/372 (41%), Gaps = 28/372 (7%)
Query: 189 RKNSNFVAFLKVFEECCRIALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVI--- 244
RK NFVA L V+ D+ + F + P+++ C+ + C + +K +
Sbjct: 202 RKGENFVA-LHVY--------DQMISFEVSPDVFTCSIVVNAYCRS----GNVDKAMVFA 248
Query: 245 -ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
ET S LG+ N ++ L YA+ G E + + LM+E G S +V Y+SLI GY K
Sbjct: 249 KETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCK 308
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
G +E A L ++ + Y ++ G+ + G ++ + + G
Sbjct: 309 KGLMEEAEHVFELL----KEKKLVADQHMYGVLMDGYCRTGQIRDAVRV---HDNMIEIG 361
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+ + ++ +I+ G +A I MN Y + YC+ EA
Sbjct: 362 VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEAL 421
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+L + + V Y+ L++ F SL++ M + + + S T++ L
Sbjct: 422 KLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL 481
Query: 484 ME-NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
+ E M + E V + T N +I CK ++ +AK L + + +P
Sbjct: 482 FKLGDFNEAMKLW--ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKP 539
Query: 543 NDQTYLSLINGY 554
QTY +L +GY
Sbjct: 540 AVQTYQALSHGY 551
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 118/279 (42%), Gaps = 18/279 (6%)
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPS-GIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
VV + ++GNV ++ A++ E S G+ ++ +I+ +G + +L M
Sbjct: 231 VVNAYCRSGNVD---KAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLM 287
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
+ G S + Y +K YCK+ EA + + L D Y L++ +
Sbjct: 288 SERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQI 347
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV---VEDPRVEVKTHD 511
+ A + +M E + + TI L+ + +++ + D ++ H
Sbjct: 348 RDAVRVHDNMIEIGVR----TNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT 403
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N+++ +C+AG +++A + +M + P TY L+ GY + VL +W +
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMML 463
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
+ +G+ + L AL K G F+ M++ E
Sbjct: 464 K-------RGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 91/441 (20%), Positives = 169/441 (38%), Gaps = 67/441 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+KP+ + N ++G C V +A K+ + M V P ++ L Y+ G +
Sbjct: 397 LKPDHHTYNTLVDGYCRA-GYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 455
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR-------------TILLCL---G 319
+ L +M + G ++ + S+L+ KLG+ A + TI L + G
Sbjct: 456 LSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISG 515
Query: 320 GGNMEQSDFSKE---------------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
ME+ + +KE TY + G+ + GN+K + +E GI
Sbjct: 516 LCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLK---EAFAVKEYMERKGI 572
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ +IS +K ++ E+ A G + + Y + +C +A
Sbjct: 573 FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYA 632
Query: 425 LVMDISSSGLQLDVG----------NYDALIEASITSQ---DFQSAFSLFRDMREARIYD 471
++ G+ L+V D + EA + Q DF ++ ++E
Sbjct: 633 TCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEF---- 688
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
L+ S T + + + +A ++ + +N I CKAG+LEDA++
Sbjct: 689 LEASATTCL-------KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKL 741
Query: 532 LRRMIFL-QFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVD 590
++ +F P++ TY LI+G A + E+ KGI +
Sbjct: 742 FSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEM-------ALKGIIPNIVTYN 794
Query: 591 AFLYALVKGGFFDAVMQVVEK 611
A + L K G D +++ K
Sbjct: 795 ALIKGLCKLGNVDRAQRLLHK 815
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 141/345 (40%), Gaps = 34/345 (9%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN 283
N + G C ++ V++A+++++ +++ +P ++ L++ Y G ++ ++ M
Sbjct: 510 NVMISGLC-KMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTIL----------------LCLGGGNMEQSD 327
G + Y++LISG K +L + ++ L G N+ D
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 328 FSKETYCEVV-KGFLQNGNV-KGLANLIIEAQKLEPSGIVVDRSVGFGII---------- 375
+ T E++ KG N N+ +AN + K++ + +++ + V F ++
Sbjct: 629 KAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEF 688
Query: 376 ---SACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
SA L A S+ + VY + CK + +A +L D+ SS
Sbjct: 689 LEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSS 748
Query: 433 GLQL-DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPEL 491
+ D Y LI + D AF+L +M I +Y ++ GL + +
Sbjct: 749 DRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDR 808
Query: 492 MAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
L ++ + + +N++I K+G + +A R +MI
Sbjct: 809 AQRLLHKLPQKG-ITPNAITYNTLIDGLVKSGNVAEAMRLKEKMI 852
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 113/520 (21%), Positives = 201/520 (38%), Gaps = 51/520 (9%)
Query: 58 QQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANS-LFPSKPVTNSLIAHLSSL 116
Q +++ + N+ + + + D+A + FK+++A P NSL+ L S
Sbjct: 98 QLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCS- 156
Query: 117 QDNHNLKRAFASVVYVIEKN--PKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYF 174
+ AF Y+ + P ++ + T LL + A A L + M +
Sbjct: 157 --GERMSEAFVLFEYMAKAGCEPNVISYST---LLDGLCKAGRLDEACRLWEEMVEKSCV 211
Query: 175 MPFELWGGFLVDICRKNSNFVAFLKVFE--ECCR-----------IALDENLDFMKPNIY 221
+ F+ +C+ N +V E +CCR +A + + +
Sbjct: 212 PDLVAYTSFVTGLCKAN-------RVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGH 264
Query: 222 A---CNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY-LYALKGLQEKIVE 277
A N +E C + +A K E M P+ F L + + K L + ++
Sbjct: 265 AEEAQNQMIEHLCRS-GMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323
Query: 278 LESL--MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ + M EF + Y+ ++ K L+ A + M S + TY
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV------NEMANYGLSPDVVTY 377
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+V G + G + +L+ E K G+ D I++A G D A S L+
Sbjct: 378 SALVDGLCKLGKLDRACDLLEEMSK---EGVFPDSFTDASILNALSKAGKVDYALSHLET 434
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M A G + L Y L CK R EA + + ++ DV +Y +I A S
Sbjct: 435 MKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQ 494
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A ++F++M + + Y +++ GL N +L L + P + H
Sbjct: 495 AAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKP--DFVMHKM- 551
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
++ CKAG+ EDA + RM F + TY++++ G
Sbjct: 552 -VVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRG 590
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 182/453 (40%), Gaps = 52/453 (11%)
Query: 193 NFVAFLKVFEECCRIA-LDENLDFMK---------PNIYACNAALEGCCYGLQSVSDAEK 242
N + + V + CC+ + +D+ L+ K P++ N+ L+G C G + +S+A
Sbjct: 107 NVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSG-ERMSEAFV 165
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
+ E M+ G PN S+ L G ++ L M E +V Y+S ++G
Sbjct: 166 LFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLC 225
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
K + A C + S + V+ + G+ + N +IE L S
Sbjct: 226 KANRVAEACD----CCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIE--HLCRS 279
Query: 363 GIVVDRSVGFG-----------------IISACVNLGLSDKA--HSILDEMNACGCSVGL 403
G++ + F I + C + L D + M C L
Sbjct: 280 GMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNL 339
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y + CK + EA +LV ++++ GL DV Y AL++ A L +
Sbjct: 340 ETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEE 399
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD---WNSIIHAFC 520
M + ++ + +I+ L + + + + L E + T D +N+++ C
Sbjct: 400 MSKEGVFPDSFTDASILNALSKAGKVDYALSHL----ETMKARGSTPDLVTYNTLLDGLC 455
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTDGQ 579
KAGR+++A L +M+ + P+ +Y +I + Q ++ E +KR + D
Sbjct: 456 KAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPD-- 513
Query: 580 KGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
H+L+D L + G D +++++ S
Sbjct: 514 --TVLYHSLLD----GLARNGLEDLALELLKTS 540
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y L+ CK +A +L+ + SG++L+V Y +I+ + A +F+ M
Sbjct: 76 YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135
Query: 466 EAR--IYDLKGSYLTIMTGLMENHRPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKA 522
+ D+ ++ +++ GL R + AF L E + E +++++ CKA
Sbjct: 136 AGGGCVPDVV-TFNSLLKGLCSGER--MSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKA 192
Query: 523 GRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQK 580
GRL++A R M+ P+ Y S + G A + + RK+ T G K
Sbjct: 193 GRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEAC----DCCRKMVTKGSK 246
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 382 GLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL-DVGN 440
G DKA +L ++ G + + Y + CK R +A ++ +S+ G + DV
Sbjct: 87 GELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVT 146
Query: 441 YDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
+++L++ + + AF LF M +A SY T++ GL + R + +E+V
Sbjct: 147 FNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV 206
Query: 501 EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
E V + S + CKA R+ +A R+M+
Sbjct: 207 EKSCVP-DLVAYTSFVTGLCKANRVAEACDCCRKMV 241
>gi|2244996|emb|CAB10416.1| salt-inducible protein homolog [Arabidopsis thaliana]
gi|7268388|emb|CAB78681.1| salt-inducible protein homolog [Arabidopsis thaliana]
Length = 777
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 145/324 (44%), Gaps = 19/324 (5%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
+ + +EK+ + M G++P+ ++F + G+ ++ VE M+ FG V
Sbjct: 264 KDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTM 323
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLII 354
+++I Y + GN++ A L E+ T+ +++ + +GN G N+
Sbjct: 324 AAMIDAYGRAGNVDMA----LSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYE 379
Query: 355 EAQKL--EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
E + L +P+ ++ +R +I + +A I ++ G + Y ++A
Sbjct: 380 EMKALGVKPNLVIYNR-----LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRA 434
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
Y + +A + ++ GL L V Y+ L+ ++ AF +F+DM+ D
Sbjct: 435 YGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRHVDEAFEIFQDMKNCETCDP 494
Query: 473 KG-SYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDA 528
++ +++T + R A L ++ E +P + V T S+I + KA +++D
Sbjct: 495 DSWTFSSLITVYACSGRVSKAEAALLQIREAGFEPTLFVLT----SVIQCYGKAKQVDDV 550
Query: 529 KRTLRRMIFLQFEPNDQTYLSLIN 552
RT +++ L P+D+ L+N
Sbjct: 551 VRTFDQVLELGITPDDRFCGCLLN 574
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 106/497 (21%), Positives = 195/497 (39%), Gaps = 37/497 (7%)
Query: 113 LSSLQDNHNLKRAFASVVYVIE-----KNPKLLDFQTVHTLLGSMRNAN--TAAPAFALV 165
L SL H+ AS +++ ++P D + LLG +R + AP F+ +
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPP--DAALLERLLGDLRESRLEPDAPLFSDL 234
Query: 166 KCMFKNRYFMP---FELWGGF-LVDICRKNSNFVAFLKVFEECCRIALDENL--DF---- 215
F R +P EL + + +++ A + R+A E L +F
Sbjct: 235 ISAFA-RAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAG 293
Query: 216 -MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+KP A NA L+G + S+ +AE+V++ MS GV P+E+++ L Y G E
Sbjct: 294 EIKPRTRAYNALLKGYVR-IGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWES 352
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
L M G +S +++G+ G+ + A + G F Y
Sbjct: 353 ARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHF----YN 408
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ F G L + + K+ GI D +I A G D+A + +EM
Sbjct: 409 VMIDTF---GKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEM 465
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
C G Y + ++ ++ ++ GL ++ Y L++ S +
Sbjct: 466 RESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRY 525
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
+ A M+ + Y ++ + + + + D +EV NS
Sbjct: 526 KEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKAD-GLEVSILVLNS 584
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI---- 570
+I+AF + R+ +A L+ M P+ TY +L+ + EQ+ V +++ E+
Sbjct: 585 LINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSG 644
Query: 571 ---KRKISTDGQKGIKF 584
RK + G+K+
Sbjct: 645 CAPDRKARAMLRSGLKY 661
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 89/451 (19%), Positives = 172/451 (38%), Gaps = 43/451 (9%)
Query: 48 QDPPNSPTQQQQQQTLTQDNITSLETNLHKSLLTNNT-----DEAWKSFKSLTANSLFPS 102
+DPP++ ++ L + + + L L++ D A + S A L P
Sbjct: 204 RDPPDAALLERLLGDLRESRLEP-DAPLFSDLISAFARAALPDAALELLASAQAIGLTPR 262
Query: 103 KPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTV---HTLLGSMRNANTAA 159
+LI+ L + + F E P+ + + + +GS++NA
Sbjct: 263 SNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVL 322
Query: 160 PAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDE-NLDFMKP 218
+ +C P E LVD + + E RI L E D +KP
Sbjct: 323 DEMS--QCGVA-----PDEATYSLLVDAYTRAGRW--------ESARILLKEMEADGVKP 367
Query: 219 NIYACNAALEGCCYGLQSVSDAEK---VIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ Y + L G + D +K V+ M GVRP+ + + +
Sbjct: 368 SSYVFSRILAG----FRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHA 423
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK--ETY 333
++ + M E G +V +++LI + K G + A+ M +S+ TY
Sbjct: 424 MDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELF------EEMRESNCPPGTTTY 477
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ + + +G+ ++ E ++ G+V + ++ G +A ++
Sbjct: 478 NIMINLLGEQEHWEGVEAMLSEMKE---QGLVPNIITYTTLVDVYGRSGRYKEAIDCIEA 534
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M A G +Y + AY + A +V + + GL++ + ++LI A +
Sbjct: 535 MKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRR 594
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLM 484
AFS+ + MRE + +Y T+M L+
Sbjct: 595 VVEAFSVLQFMRENGLRPDVITYTTLMKALI 625
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 156/387 (40%), Gaps = 12/387 (3%)
Query: 169 FKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALE 228
+ R P + G LV+ K L+VF+ R N ++P++ N ++
Sbjct: 307 MEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRL-RGKGGSNWVGVEPDVVLFNTLID 365
Query: 229 GCCYGLQSVSDAEKVIETMSVLGV-RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGF 287
G C + D ++E M + + RPN ++ L + G ++ EL MNE G
Sbjct: 366 GLCK-VGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGV 424
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK 347
++ ++L+ G K G + A G G + TY ++ F N+
Sbjct: 425 QPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNA----ATYTALISAFCGVNNI- 479
Query: 348 GLANLIIEA-QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVY 406
N ++ +++ SG D V + +IS G + A ++ ++ G S+ Y
Sbjct: 480 ---NRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCY 536
Query: 407 VPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+ +CK+ + +L+ ++ +G++ D Y+ LI + DF +A + M +
Sbjct: 537 NVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIK 596
Query: 467 ARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
+ +Y I+ + E+ +V T +N +I A C+ ++
Sbjct: 597 EGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVD 656
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLING 553
A + M + PN TY +++ G
Sbjct: 657 RAISLMEDMKVKRVRPNTTTYNAILKG 683
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 159/392 (40%), Gaps = 46/392 (11%)
Query: 222 ACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA-YLYALKGLQEKIVELES 280
+CNA L G + + +++ M +RP+ +FG L +L + + E + +
Sbjct: 283 SCNALLTWLGRG-RDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDR 341
Query: 281 LM-----NEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L N G +V +++LI G K+G E ++L + GN+ + + TY
Sbjct: 342 LRGKGGSNWVGVEPDVVLFNTLIDGLCKVGK-EEDGLSLLEEMKMGNINRPN--TVTYNC 398
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPSGIV-------------VDRSVGF-------- 372
++ GF + GN L + + ++P+ I V R+V F
Sbjct: 399 LIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKG 458
Query: 373 ---------GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+ISA + ++A +EM + GCS VY + C R +A+
Sbjct: 459 LKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDAS 518
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+V + +G LD Y+ LI + + + L +M E + +Y T+++ L
Sbjct: 519 VVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYL 578
Query: 484 MENHRPELMAAFLDEVV-EDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFL-QFE 541
+ + +++++ E R V T + +IIHA+C +++ + M +
Sbjct: 579 GKTGDFATASKVMEKMIKEGLRPSVVT--YGAIIHAYCSKKNVDEGMKIFGEMCSTSKVP 636
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
PN Y LI+ + + ++K K
Sbjct: 637 PNTVIYNILIDALCRNNDVDRAISLMEDMKVK 668
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 131/295 (44%), Gaps = 15/295 (5%)
Query: 212 NLDFMKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSF-GFLAYLYALK 269
N + ++PN+ N ++G C +G V A + M G++ N +++ ++ +
Sbjct: 420 NEEGVQPNVITLNTLVDGLCKHG--RVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVN 477
Query: 270 GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI-LLCLGGGNMEQSDF 328
+ + E +++ G S V Y SLISG G + AS + L L G ++++S
Sbjct: 478 NINRAMQCFEEMLSS-GCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRS-- 534
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
Y ++ GF + ++ + L+ E +E +G+ D +IS G A
Sbjct: 535 ---CYNVLISGFCKKKKLERVYELLTE---MEETGVKPDTITYNTLISYLGKTGDFATAS 588
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI-SSSGLQLDVGNYDALIEA 447
++++M G + Y + AYC + E ++ ++ S+S + + Y+ LI+A
Sbjct: 589 KVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDA 648
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
+ D A SL DM+ R+ +Y I+ G+ + +D +VE+
Sbjct: 649 LCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEE 703
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 128/339 (37%), Gaps = 50/339 (14%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P + +CNA + LQ A M + PN + + + G EK +E
Sbjct: 144 PRVESCNAYISAS-ISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIE 202
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M GFS + Y++LI+GY G L S + +L ME++ + T+
Sbjct: 203 VFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKIL------MEKNGVRPDDVTFNT 256
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEM 394
++ GF + G + AN I K + VV ++ + +I+ +G S+ + DEM
Sbjct: 257 LINGFCRGGKLHE-ANKIFSEMK---ANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEM 312
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + Y + C E RT +A LV ++ L + + ALI ++
Sbjct: 313 LRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNS 372
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
+ AF L++ M I +G N+ H +
Sbjct: 373 ERAFQLYKSM--------------IRSGCHPNY----------------------HTFKM 396
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+I FCK + A +R M P+ T L G
Sbjct: 397 LISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRG 435
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 117/287 (40%), Gaps = 14/287 (4%)
Query: 216 MKPNIYACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+ PN+Y N + C +G + A +V + M +G P +S+ L Y KGL
Sbjct: 177 ISPNVYTLNMVMCAFCKWG--KLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNS 234
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET-- 332
++L+ LM + G V +++LI+G+ + G L A++ M+ +D T
Sbjct: 235 GMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIF------SEMKANDVVPNTIT 288
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
Y ++ G+ Q GN + L E + +GI D +I G + KA ++
Sbjct: 289 YNTLINGYSQVGNSEMGGRLHDEMLR---NGIKADILTYNALILGLCMEGRTKKAAYLVK 345
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
E++ + + C + A QL + SG + + LI ++
Sbjct: 346 ELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNE 405
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
DF A + R+M E I + + GL + + EL E+
Sbjct: 406 DFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEM 452
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/247 (18%), Positives = 95/247 (38%), Gaps = 8/247 (3%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++ A G +KA + +M G S + Y + YC + +L + + +G
Sbjct: 187 VMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNG 246
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ D ++ LI A +F +M+ + +Y T++ G + E+
Sbjct: 247 VRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGG 306
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
DE++ + ++ +N++I C GR + A ++ + PN T+ +LI G
Sbjct: 307 RLHDEMLRNG-IKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITG 365
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
+ ++ + R G ++ + K FD ++VV +
Sbjct: 366 QCVRKNSERAFQLYKSMIR-------SGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMS 418
Query: 614 EMKVFVD 620
E + D
Sbjct: 419 ERSIAPD 425
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 58/156 (37%), Gaps = 36/156 (23%)
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
C V+ K Y + + A + + G V + +A I ASI+ Q A
Sbjct: 107 CDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIAL 166
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
+ +R+M+ RI P V + N ++ A
Sbjct: 167 TFYREMQRYRI--------------------------------SPNV----YTLNMVMCA 190
Query: 519 FCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
FCK G+LE A ++M + F P +Y +LI GY
Sbjct: 191 FCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGY 226
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 147/333 (44%), Gaps = 42/333 (12%)
Query: 263 AYLYALKGLQEKIVELESLM---------------NEFGFSSQMV---------FYSSLI 298
A L L+ + K+V L+ +M + F F S+MV Y++LI
Sbjct: 192 AALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLI 251
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
G +G L+ A + L +E + + T+ +V F + G VK N+ + K
Sbjct: 252 CGLCIMGQLKDA----IGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMK 307
Query: 359 --LEPSGIVVDRSV--GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
++P+ IV S+ G+ +++ +KA SI + M G + + Y + +C
Sbjct: 308 KDVKPN-IVTYNSLMNGYCLVNEV------NKAESIFNTMAQIGVAPDVHSYSIMISGFC 360
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
K EA +L ++ + DV Y++LI+ S A L +M +
Sbjct: 361 KIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNII 420
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
+Y +++ L +NH + L ++ +D ++ +N +I+ CK+GRL+DA++
Sbjct: 421 TYNSLLDALCKNHHVDKAIELLTKL-KDHNIQPSVCTYNILINGLCKSGRLKDAQKVFED 479
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
++ + + TY ++I G+ ++ F + W
Sbjct: 480 VLVNGYNIDVYTYNTMIKGF--CKKGFVIPQFW 510
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 108/244 (44%), Gaps = 18/244 (7%)
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
KA D++ A G + Y + CK +T A +++ I ++LDV Y+ +I
Sbjct: 157 KALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTII 216
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
+ + AF + +M RI +Y T++ GL + + L +++ + +
Sbjct: 217 DGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILE-NI 275
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
+ ++ ++ AFCK G++++AK M+ +PN TY SL+NGY +
Sbjct: 276 NPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNE------ 329
Query: 566 MWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF-----FDAVMQVVEKSQEMKVFVD 620
++ + +T Q G+ D Y+++ GF D M++ E+ ++F D
Sbjct: 330 -VNKAESIFNTMAQIGVA-----PDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPD 383
Query: 621 KWKY 624
Y
Sbjct: 384 VVTY 387
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/400 (19%), Positives = 168/400 (42%), Gaps = 62/400 (15%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++Y+ +E C V E M G++PN S+ L YA+ G+ E + +
Sbjct: 328 HLYSVRGEIENC----------RAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSV 377
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
+ G +V Y+SL++ Y G Q +KE +
Sbjct: 378 FGDIKRNGIVPDVVSYTSLLNSY-------------------GRSRQPGKAKEVF----- 413
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
L++ ++ +P+ + + +I A + G +A I +M G
Sbjct: 414 -------------LMMRKERRKPNVVTYN-----ALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS-GLQLDVGNYDALIEASITSQDFQSA 457
+ V V TL A C + + V+ + S G+ L+ Y++ I + I + + + A
Sbjct: 456 TKPNV-VSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 514
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
+L++ MR+ ++ ++ +++G + ++L E +ED + + ++S++
Sbjct: 515 IALYQTMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKE-MEDLSIPLTKEVYSSVLC 573
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTD 577
A+ K G++ +A+ +M +P+ Y S+++ Y +E++ ++ E++
Sbjct: 574 AYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGKACELFLEME------ 627
Query: 578 GQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
GI+ + A + A KGG V +++ +E +V
Sbjct: 628 -ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEV 666
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 162/390 (41%), Gaps = 38/390 (9%)
Query: 217 KPNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
KPN+ NA ++ YG +++A ++ M G +PN S + L A +K
Sbjct: 422 KPNVVTYNALIDA--YGSNGFLAEAVEIFRQMEQDGTKPNVVS---VCTLLAACSRSKKK 476
Query: 276 VELESLMN---EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
V +E++++ G + Y+S I Y+ LE A + ++ T
Sbjct: 477 VNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA----IALYQTMRKKKVKADSVT 532
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+ ++ G + + I +++E I + + V ++ A G +A SI +
Sbjct: 533 FTILISGSCR---MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
+M GC + Y L AY + +A +L +++ ++G++ D AL+ A
Sbjct: 590 QMKMAGCKPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTG---LMENHRPELMAAFLDEVVEDPRVEVKT 509
+ F L MRE + + I + L E R + +D + P + +
Sbjct: 650 QPSNVFVLMDLMREKEVPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYL--PSLSIGL 707
Query: 510 HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA---EQYFSVLMM 566
N +++ F K+G++E + ++I E N +TY L+ + +Y VL
Sbjct: 708 T--NQMLYLFGKSGKVEAMMKLFYKIIASGVEINFKTYAILLEHLLAVGNWRKYIEVL-E 764
Query: 567 W---------HEIKRKISTDGQK--GIKFE 585
W +++ R I + G++ GI+FE
Sbjct: 765 WMSDAGIQPSNQMYRDIISFGERSAGIEFE 794
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 87/203 (42%), Gaps = 5/203 (2%)
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
+I+A G A +++D+M + Y + A +A ++ ++ +
Sbjct: 183 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRQALEVCKKMTDN 242
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME-NHRPEL 491
G+ D+ ++ ++ A + + + A S F M+ A++ ++ I+ L + +
Sbjct: 243 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 302
Query: 492 MAAFLDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+ F + D R E + + SI+H + G +E+ + M+ +PN +Y +
Sbjct: 303 LDVF--NSMRDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNA 360
Query: 550 LINGYVTAEQYFSVLMMWHEIKR 572
L+ Y + L ++ +IKR
Sbjct: 361 LMGAYAVHGMSENALSVFGDIKR 383
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 150/364 (41%), Gaps = 12/364 (3%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN++ + G C ++ AE ++ M G++PN +++ L + G ++
Sbjct: 211 KPNVHTYTVMIGGYCRE-GKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAF 269
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
EL + M + GF + Y+++I G+ K G ++ A + + + G F K TY +
Sbjct: 270 ELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG----LKFDKITYTIL 325
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ + G++ +L ++ +G D +IS +++ D+
Sbjct: 326 ITEHCKQGHITYALDLF---DRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLM 382
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G Y + YCK R+ A ++ + +G D Y ALI +
Sbjct: 383 IGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEE 442
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A +L+ M + R+ + + +T+ + + + LD + D R +V T D ++
Sbjct: 443 AKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRL--DKRQQVHTVD--VVV 498
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
G ++ A L++++ + + TY IN +Y M + +KIS+
Sbjct: 499 RKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEMSEKFSKKISS 558
Query: 577 DGQK 580
+K
Sbjct: 559 FKEK 562
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 154/372 (41%), Gaps = 20/372 (5%)
Query: 191 NSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEG--CCYGLQSV------SDAEK 242
N F A + V CCR E +D + ++ +L+ C ++S+ D +
Sbjct: 73 NRGFGALVVV---CCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSE 129
Query: 243 VIETMSVLGVRPNESSF-GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
M G PN ++ ++ L + +++ LE ++ G + +++LI G
Sbjct: 130 FFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGR-GLKPNVYTHTTLIDGL 188
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
K+G E A R L + + + + TY ++ G+ + G + L++ ++
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPN---VHTYTVMIGGYCREGKLARAEMLLV---RMVE 242
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
G+ + + +I G D+A ++++M G + Y + +CK+ + E
Sbjct: 243 QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQE 302
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A +++ +S GL+ D Y LI A LF M E +Y ++++
Sbjct: 303 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 362
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
+ + E F D+ + + K + S+I +CK GR A R RM+
Sbjct: 363 TYCQQRQMEESQKFFDKCLMIGLLPTK-QTYTSMIAGYCKVGRSTLALRVFERMVQNGCF 421
Query: 542 PNDQTYLSLING 553
+ TY +LI+G
Sbjct: 422 ADSITYGALISG 433
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 143/373 (38%), Gaps = 88/373 (23%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A KV + M+ GV P FG L + +G E++ L + M +GFS
Sbjct: 57 ARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFS----------- 105
Query: 300 GYVKLGNLESASRTIL---LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL---- 352
L++A+ T++ LC G + S+F + L+ G + N
Sbjct: 106 -------LDNATCTVVVRSLCEKGRFKDVSEFFRR--------MLETGTPPNVVNYTAWI 150
Query: 353 --IIEAQKLEPSGIVVDRSVGFGI----------ISACVNLGLSDKAHSI-LDEMNACGC 399
+ + + ++ + V++ VG G+ I +G +++A + L + +
Sbjct: 151 DGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSY 210
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
+ Y + YC+E + A A L++ + GL+ + Y LI F AF
Sbjct: 211 KPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFE 270
Query: 460 LFRDMREARIYDLKGSYLTIMTG------LMENHRPELMAA------------------- 494
L M++ +Y ++ G + E ++ MA
Sbjct: 271 LMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHC 330
Query: 495 ----------FLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
D +VE+ P +E + S+I +C+ ++E++++ + + +
Sbjct: 331 KQGHITYALDLFDRMVENGCCPDIEA----YTSLISTYCQQRQMEESQKFFDKCLMIGLL 386
Query: 542 PNDQTYLSLINGY 554
P QTY S+I GY
Sbjct: 387 PTKQTYTSMIAGY 399
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 110/265 (41%), Gaps = 8/265 (3%)
Query: 371 GFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
GFG ++ C G ++ ++L M G S+ +++ C++ R + ++ +
Sbjct: 75 GFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRM 134
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+G +V NY A I+ + + AF + +M + ++ T++ GL +
Sbjct: 135 LETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT 194
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
E ++++ + H + +I +C+ G+L A+ L RM+ +PN TY +
Sbjct: 195 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 254
Query: 550 LINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVV 609
LI G+ + + +++K Q+G +A + K G +V+
Sbjct: 255 LIGGHCKGGSFDRAFELMNKMK-------QEGFLPNIYTYNAVIDGFCKKGKIQEAYKVL 307
Query: 610 EKSQEMKVFVDKWKYKQAFMENHKK 634
+ + DK Y E+ K+
Sbjct: 308 RMATSQGLKFDKITYTILITEHCKQ 332
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 152/360 (42%), Gaps = 49/360 (13%)
Query: 218 PNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK-- 274
P++ A N + C GL V ++E+++ + GV PN +F +G ++
Sbjct: 214 PDVVAFNKLVHVLCKKGL--VFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAV 271
Query: 275 ----IVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
+VE E + + GF + Y+S+I GY K G ++ A+R + + G + +
Sbjct: 272 RNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKG-FKPDE 330
Query: 328 FSKETYCEVVKGFLQNGN--------------------------VKGLA--NLIIEAQKL 359
F TYC ++ GF ++G+ +KGL+ LI+ A +L
Sbjct: 331 F---TYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQL 387
Query: 360 ----EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
+G + + +I+ +G A ++D+ A GC + Y + YCK
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCK 447
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
+ + AT++V + S G+ DV Y+ L+ + + +F+ M E +
Sbjct: 448 QLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIIT 507
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
Y I+ L + + L E ++ ++ + ++ FCK G ++ A + RRM
Sbjct: 508 YNIIVDSLCKAKKVNEAVDLLGE-MKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 162/396 (40%), Gaps = 12/396 (3%)
Query: 181 GGFLVDICRKNSNFVAFLK--VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVS 238
GGF D NS + K + ++ R+ D KP+ + + + G C
Sbjct: 289 GGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKD-GDPD 347
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
A V + G+RP+ + L + +GL ++L + M E G + Y+ +I
Sbjct: 348 RAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVI 407
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQK 358
+G K+G + AS + + G F TY ++ G+ + + ++ +
Sbjct: 408 NGLCKMGCVSDASHLVDDAIAKG-CPPDIF---TYNTLIDGYCKQLKLDSATEMV---NR 460
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHR 418
+ G+ D +++ G S++ I M GC+ + Y + + CK +
Sbjct: 461 MWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKK 520
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM-REARIYDLKGSYL 477
EA L+ ++ S GL+ DV ++ L D A+ LFR M ++ + +Y
Sbjct: 521 VNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYN 580
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
I++ E MA L V+++ + + + +I FCK G + + L +
Sbjct: 581 IIVSAFSEQLNMN-MAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENME 639
Query: 538 LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
+F P+ T+ ++N ++ + + H + +K
Sbjct: 640 KRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQK 675
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 116/297 (39%), Gaps = 54/297 (18%)
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
I++ V G ++AH + M G + Y +K++CK R A +L+ ++
Sbjct: 116 AIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPEL 175
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY--DL----KGSYLTIMTGLM-E 485
G + Y ++ S + A LF +M AR D+ K ++ GL+ E
Sbjct: 176 GCDSNAVAYCTVVAGLYDSGEHDHARELFDEML-ARCLCPDVVAFNKLVHVLCKKGLVFE 234
Query: 486 NHR-----------PELMA-----------AFLDEVVEDPRV---------------EVK 508
+ R P L LD V + RV E
Sbjct: 235 SERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPD 294
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+NSII +CK G ++DA R L+ +F F+P++ TY SLING+ + ++
Sbjct: 295 DLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVF- 353
Query: 569 EIKRKISTDG-QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
DG KG++ L + + L + G +Q++ + E + W Y
Sbjct: 354 -------KDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTY 403
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 117/279 (41%), Gaps = 15/279 (5%)
Query: 281 LMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
LM+E G + +V Y++ I GY K +L + + L ME+ + TY
Sbjct: 247 LMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL------MEKEGVACNVVTYTL 300
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ GF G ++ L +++ GI D V IIS G +A + DEM
Sbjct: 301 LIHGFSNIGKIEEAQRLF---EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 357
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G Y + CK + A LV ++ G+ L+ ++ LI+ S
Sbjct: 358 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 417
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A L M + + +Y +I +GL + +R + L +VE V T + ++
Sbjct: 418 EALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG-VSPNTMSFTTL 476
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
I +CK G +AKR R M PN TY LI+GY
Sbjct: 477 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGY 515
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 164/396 (41%), Gaps = 47/396 (11%)
Query: 212 NLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL 271
NLD ++ +Y+ L+G C V K+++ ++ GV+ N ++ Y +
Sbjct: 218 NLD-VEVTVYSLTIVLDGLC-KRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 275
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR------------------T 313
+ E+ +LM + G + +V Y+ LI G+ +G +E A R +
Sbjct: 276 LGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTS 335
Query: 314 ILLC-LGGGNMEQSDF------------SKETYCEVVKGFLQNGNVKGLANLIIEAQKLE 360
I+ C GN++++ S TY ++ G + G ++ L+ E Q
Sbjct: 336 IISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQ--- 392
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
GI ++ + +I G+ D+A + M G + Y CK +R
Sbjct: 393 GKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKD 452
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
EA L+ + G+ + ++ LI+ +F A +FR+M E KG+ I+
Sbjct: 453 EAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE------KGNVPNII 506
Query: 481 T--GLMENH--RPELMAAF-LDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
T L++ + R + A L + +E+ + + S+IH C G+++ A + M
Sbjct: 507 TYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEM 566
Query: 536 IFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
PN TY ++I+G + ++ E+K
Sbjct: 567 PQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMK 602
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 4/242 (1%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
TY ++G+ + ++ G+A ++ +E G+ + +I N+G ++A +
Sbjct: 262 TYNAFIEGYFKRLDLGGVAEIL---TLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 318
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+EM G + VY + C+ A L +++ GL Y ALI +
Sbjct: 319 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 378
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
++A L +M+ I + T++ G E+ + A L V+E +E
Sbjct: 379 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD-EALRLQVVMEKKGLESDVFA 437
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+NSI CK R ++AK L M+ PN ++ +LI+ Y + ++ E++
Sbjct: 438 YNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREME 497
Query: 572 RK 573
K
Sbjct: 498 EK 499
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 136/352 (38%), Gaps = 12/352 (3%)
Query: 211 ENLDFMKPNIYACNAA----LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
E L M+ ACN L + + +A+++ E M G+ + + +
Sbjct: 281 EILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN 340
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
G ++ + L M + G Y +LI G K G +E+A + G G
Sbjct: 341 CRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG----I 396
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
D + + ++ G+ ++G V L + +E G+ D I S L D+
Sbjct: 397 DLNPVIFNTLIDGYCESGMVDEALRLQV---VMEKKGLESDVFAYNSIASGLCKLNRKDE 453
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A +L M G S + + YCKE EA ++ ++ G ++ Y+ LI+
Sbjct: 454 AKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLID 513
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ + A L ++ + + +++ G + + ++ DE+ + V
Sbjct: 514 GYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVP 573
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+ ++I K GR E+A + M P+D Y SL+ +AE
Sbjct: 574 -NVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSAE 624
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 126/312 (40%), Gaps = 33/312 (10%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
++FEE ++ ++ ++ +I +CN C G +V A + + M+ G+ P+ +
Sbjct: 316 RLFEEMREKGIEADV-YVYTSIISCN-----CRSG--NVKRALVLFDEMTDKGLIPSAHT 367
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+G L + G E L + M G V +++LI GY + G ++ A R ++
Sbjct: 368 YGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVV-- 425
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV---VDRSVGFGII 375
ME+ + F N GL L +K E G++ V+R V +
Sbjct: 426 ----MEKKGLESDV-------FAYNSIASGLCKL---NRKDEAKGLLFSMVERGVSPNTM 471
Query: 376 SACVNLGLSDK------AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
S + + K A + EM G + Y + Y K EA +L ++
Sbjct: 472 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 531
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+ GL DV +LI A LF +M + + +Y +++GL ++ R
Sbjct: 532 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRS 591
Query: 490 ELMAAFLDEVVE 501
E DE+ E
Sbjct: 592 EEAFKLYDEMKE 603
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/423 (20%), Positives = 167/423 (39%), Gaps = 61/423 (14%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P+++ N + G C Q + A V + + G+ P+ ++ + Y +G ++
Sbjct: 181 VSPDLFTFNIVISGLCKTGQ-LRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRM 239
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
+++L+ E G S V ++ L++GY K N +A R M+Q +
Sbjct: 240 YHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVF------EEMKQQGIAASV 293
Query: 332 -TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSI 390
TY +V G G V+ L+ E + L G+V + + +++ G+ A
Sbjct: 294 VTYSALVWGLCSEGKVEEGVKLVDEMKDL---GLVPNLATLNSVLNGFCKKGMMTDAEGW 350
Query: 391 LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
+D M + Y + Y + + +A + +S G++ + Y+ LI
Sbjct: 351 IDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTR 410
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
+ D++S L +MR +KG I+T
Sbjct: 411 NGDWRSVSGLLDEMR------MKGVRADIVT----------------------------- 435
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+N +I A C G + A + L M+ + EP TY ++INGY S +EI
Sbjct: 436 -YNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSA----YEI 490
Query: 571 KRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY---KQA 627
+ ++ ++ +N+ F+ L + G + +++ + E + + Y K+
Sbjct: 491 RTRMEKGKKRANVVTYNV---FIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG 547
Query: 628 FME 630
ME
Sbjct: 548 MME 550
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 21/313 (6%)
Query: 176 PFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ 235
P E+ LV+ K+SN A ++VFEE + I A +GL
Sbjct: 256 PNEVTFNVLVNGYCKDSNTAAAVRVFEE-----------MKQQGIAASVVTYSALVWGLC 304
Query: 236 S---VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV 292
S V + K+++ M LG+ PN ++ + + KG+ M + +V
Sbjct: 305 SEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVV 364
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL 352
Y+ L+ GY +L ++ A G G + Y ++ GF +NG+ + ++ L
Sbjct: 365 TYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARI----YNCLIAGFTRNGDWRSVSGL 420
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ E + +V +V G + CV G KA +LDEM G Y +
Sbjct: 421 LDEMRMKGVRADIVTYNVLIGAL--CVK-GEVRKAVKLLDEMLMVGLEPVHLTYNTIING 477
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
YC++ A ++ + + +V Y+ I+ + L +M E +
Sbjct: 478 YCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPN 537
Query: 473 KGSYLTIMTGLME 485
+Y TI G+ME
Sbjct: 538 GVTYDTIKEGMME 550
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 154/353 (43%), Gaps = 11/353 (3%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
++P+ Y N + G C G ++A V++ M P+ ++ L + ++
Sbjct: 28 VEPDAYTYNTLIRGLC-GRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQA 86
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++L M + G + +V Y+ +++G + G ++ A L L E + S Y
Sbjct: 87 MKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE-FLKNLPSYGCEPNTVS---YNI 142
Query: 336 VVKGFLQNGNVKGLANLIIE-AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
V+KG + L+ E QK P +V +IS GL + A +L+++
Sbjct: 143 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM----LISFLCRKGLVEPALEVLEQI 198
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
GC+ Y P L A+CK+ + +A + + S G D+ +Y+ L+ A S +
Sbjct: 199 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 258
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A L +++ + SY T++ GL + + + L+E+V ++ +++
Sbjct: 259 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK-GLQPDIITYST 317
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
I C+ R+EDA R ++ + PN Y ++I G + S + ++
Sbjct: 318 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLF 370
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 127/285 (44%), Gaps = 21/285 (7%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y+++++GY G L++A R + +E + TY +++G G ++
Sbjct: 3 YNAMVAGYCGAGQLDAARRLV----AEMPVEPDAY---TYNTLIRGLCGRGRTANALAVL 55
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
E + VV ++ ++ A +A +LDEM GC+ + Y +
Sbjct: 56 DEMLRRRCVPDVVTYTI---LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 112
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C+E R +A + + ++ S G + + +Y+ +++ T++ ++ A L +M + K
Sbjct: 113 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQ------K 166
Query: 474 GSYLTIMTGLMENH---RPELMAAFLDEVVEDPRVEVKTHD--WNSIIHAFCKAGRLEDA 528
G ++T M R L+ L+ + + P+ + +N ++HAFCK +++ A
Sbjct: 167 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA 226
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
L M+ P+ +Y +L+ + + + + H++K K
Sbjct: 227 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 271
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 153/380 (40%), Gaps = 37/380 (9%)
Query: 132 VIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKN 191
++ + P D T +TL+ + A A A++ M + R +P + L++ K
Sbjct: 22 LVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR-CVPDVVTYTILLEATCKR 80
Query: 192 SNFVAFLKVFEE--------------------CCRIALDENLDFMK--------PNIYAC 223
S + +K+ +E C +D+ ++F+K PN +
Sbjct: 81 SGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSY 140
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN 283
N L+G C + DAE+++ M G PN +F L KGL E +E+ +
Sbjct: 141 NIVLKGLCTA-ERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 199
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN 343
++G + + Y+ L+ + K ++ A + L + G +Y ++ ++
Sbjct: 200 KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI----VSYNTLLTALCRS 255
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
G V L+ + + + +++ + +I G + +A +L+EM + G +
Sbjct: 256 GEVDVAVELLHQLKDKGCAPVLISYNT---VIDGLTKAGKTKEALELLNEMVSKGLQPDI 312
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
Y C+E R +A + + G++ + Y+A+I ++ SA LF
Sbjct: 313 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 372
Query: 464 MREARIYDLKGSYLTIMTGL 483
M + +Y ++ GL
Sbjct: 373 MIGNGCMPNESTYTILIEGL 392
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 43/206 (20%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y ++ C RTA A ++ ++ DV Y L+EA+ ++ A L +MR
Sbjct: 35 YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 94
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+ KG I+T +N +++ C+ GR+
Sbjct: 95 D------KGCTPDIVT------------------------------YNVVVNGICQEGRV 118
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFE 585
+DA L+ + EPN +Y ++ G TAE+ W + + + GQKG
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER-------WEDAEELMGEMGQKGCPPN 171
Query: 586 HNLVDAFLYALVKGGFFDAVMQVVEK 611
+ + L + G + ++V+E+
Sbjct: 172 VVTFNMLISFLCRKGLVEPALEVLEQ 197
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/416 (20%), Positives = 166/416 (39%), Gaps = 45/416 (10%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V +A++++ M+ GV+PN ++ + +G + ++E + + +V Y+S
Sbjct: 337 VGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTS 396
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLII 354
L+ Y GN +A+R + M Q + TY +++ + G + L+
Sbjct: 397 LLHAYCSEGNAAAANRIL------DEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLL- 449
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLG---------- 404
+++ G +D + II D A I+D M G S+ LG
Sbjct: 450 --ERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEG-SLALGRLGYSFLSLL 506
Query: 405 --------------VYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASIT 450
Y + A CKE R EA + ++++ + D YD I
Sbjct: 507 TDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCK 566
Query: 451 SQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH 510
A + RDM + +Y ++ G E H + + + E+ + +
Sbjct: 567 HGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEM-KGKGICPNVM 625
Query: 511 DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+NS+I +FC+ G + A L M+ + PN ++ LI + + + ++
Sbjct: 626 TYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDA- 684
Query: 571 KRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ 626
+ST GQK + + Y G + +A M ++E E+++ + ++ YKQ
Sbjct: 685 --SLSTCGQKEVLYSLMCTQLSTY----GRWLEA-MNILETVLELRISIHRFPYKQ 733
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 170/418 (40%), Gaps = 73/418 (17%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+ CN + G C Q V +AE+++E M G+ PN +F G ++++
Sbjct: 211 NLVVCNTVVAGFCREGQ-VDEAERLVERMRDEGLAPNVVTFNARISALCKAG---RVLDA 266
Query: 279 ESLMN------EFGFS-SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
+ N E G V + ++SG+ + G ++ A + + GG + + E
Sbjct: 267 YRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRV----E 322
Query: 332 TYCEVVKGFLQNGNV------------KGLA------NLIIEA----------QKLE--- 360
+Y + G ++NG V +G+ N+I++ +K+E
Sbjct: 323 SYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFV 382
Query: 361 PSGIVVDRSVGF-GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
SG++ V + ++ A + G + A+ ILDEM GC+ Y L++ K R
Sbjct: 383 KSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRI 442
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDM--------------- 464
EA +L+ +S G LD + + +I+ + A + M
Sbjct: 443 TEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSF 502
Query: 465 --------REARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSI 515
R + +Y T+++ L + R E L+ + +D + + +++
Sbjct: 503 LSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKD--ISPDSVLYDTF 560
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
IH +CK G+ A + LR M +P+ +TY LI G+ +L + E+K K
Sbjct: 561 IHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGK 618
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 147/348 (42%), Gaps = 35/348 (10%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV---LGV-RPNESSFGFLAYLYALKGL 271
+ PN+ NA + C V DA ++ M G+ RP++ +F + + G+
Sbjct: 243 LAPNVVTFNARISALCKA-GRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGM 301
Query: 272 QEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
++ L +M GF ++ Y+ +SG V+ G + A + +L + ++ + +
Sbjct: 302 VDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEA-QELLREMAHEGVQPNSY--- 357
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLE---PSGIVVDRSVGF-GIISACVNLGLSDKA 387
TY +V G + G + +K+E SG++ V + ++ A + G + A
Sbjct: 358 TYNIIVDGLCKEGKA-------FDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAA 410
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ ILDEM GC+ Y L++ K R EA +L+ +S G LD + + +I+
Sbjct: 411 NRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDG 470
Query: 448 SITSQDFQSAFSLFRDM-REARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ A + M E + + Y + + + D +
Sbjct: 471 LCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLP---DRIT------ 521
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+++++ A CK GR ++AK+ L MI P+ Y + I+GY
Sbjct: 522 -----YSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGY 564
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 372 FGIIS-ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
FGI++ G S A +LD M ++ L V + +C+E + EA +LV +
Sbjct: 184 FGILARGYCRAGRSMDALGVLDSMP----TMNLVVCNTVVAGFCREGQVDEAERLVERMR 239
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL----KGSYLTIMTGLMEN 486
GL +V ++A I A + A+ +F DM+E L + ++ +++G E
Sbjct: 240 DEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCE- 298
Query: 487 HRPELMAAFLDEVVEDPRVEV----------KTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
A +DE RV V + +N + + G + +A+ LR M
Sbjct: 299 ------AGMVDEA----RVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMA 348
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
+PN TY +++G + F V + +K + T
Sbjct: 349 HEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMT 388
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 116/268 (43%), Gaps = 21/268 (7%)
Query: 292 VFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGL 349
+ YS+L+S K G + A + +L +G D S ++ Y + G+ ++G
Sbjct: 520 ITYSTLVSALCKEGRFDEAKKKLLEMIG------KDISPDSVLYDTFIHGYCKHGKTSLA 573
Query: 350 ANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
++ +E + +PS R+ +I SD+ ++ EM G + Y
Sbjct: 574 VKVLRDMEKKGCKPS----TRTYNL-LIWGFREKHNSDEILKLISEMKGKGICPNVMTYN 628
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+K++C+ +A L+ ++ + + ++ +++ LI+A + DF +A +F +A
Sbjct: 629 SLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVF----DA 684
Query: 468 RIYDL--KGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+ K ++M + + L A + E V + R+ + + II CK +
Sbjct: 685 SLSTCGQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEV 744
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ R L+ ++ + + ++ +I+
Sbjct: 745 DHGHRLLKLLMVKGYSFDPAAFMPVIDA 772
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 98/487 (20%), Positives = 181/487 (37%), Gaps = 61/487 (12%)
Query: 183 FLVDICRKNSNFVAFLKVF------EECCRIALDENLDFMKPNIYACNAALEGCCYGLQS 236
L+D+ + N F +KVF E + + D ++ NI +CN L+ C
Sbjct: 128 LLLDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLK-CLVEDNR 186
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALK-GLQEKIVELESLMNEF---GFSSQMV 292
V + E + G RPN ++ + + G I ++ + G + +V
Sbjct: 187 VDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVV 246
Query: 293 FYSSLISGYVKLGNLESASRTIL-LCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLAN 351
Y + I G K+G A R I LC + + + V+ G Q G + +
Sbjct: 247 TYGTYIKGLCKVGLFGVAWRLIQNLC-----RKNQPLNNHCFNAVIYGLCQGGILDEASE 301
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
+ E ++ SGI+ D +I G D+A + EM G + Y +
Sbjct: 302 VFKE---MKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILID 358
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
+CKE R +A ++ ++ +SG+ DV +Y LI+ D SA + +M
Sbjct: 359 GFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSP 418
Query: 472 LKGSYLTIMTGLME--------------------------NH-------RPELMAAF-LD 497
+Y +++ G + NH +P+ A L
Sbjct: 419 SAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALS 478
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
E ++ V + +N IH C+ E A + L M+ P+ Y +LI+ +
Sbjct: 479 EKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKR 538
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKV 617
+M++ ++ + GI F + + D ++ + +E +V
Sbjct: 539 LNSEKAVMLFIKMTK-------VGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRV 591
Query: 618 FVDKWKY 624
+ D+ Y
Sbjct: 592 YPDQIAY 598
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 173/439 (39%), Gaps = 65/439 (14%)
Query: 186 DICRKNS--NFVAFLKVFEECCRIA-LDENLDFMK--------PNIYACNAALEGCCYGL 234
++CRKN N F V C+ LDE + K P++Y+ + ++G C
Sbjct: 270 NLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRK- 328
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
V A +V + M G+ PN S+ L + +G +K +E+ M G + Y
Sbjct: 329 GRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSY 388
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANL 352
S LI G+ + G+++SA + M ++FS YC ++KG+ ++ K AN
Sbjct: 389 SILIDGFCRKGDMDSAIKF------WEEMTSNNFSPSAFNYCSLIKGYYKS---KQFANA 439
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVN-------LGLSDKAHSILDEMNA--------- 396
+ E + ++ G+ D I+S L LS+K N
Sbjct: 440 LKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHR 499
Query: 397 -CGCSVG------LGV------------YVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
C SV L V Y + + K + +A L + ++ G+ +
Sbjct: 500 ICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFN 559
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
V Y LI I+ A+ LF+ M+E+R+Y + +Y +++ G A D
Sbjct: 560 VKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFD 619
Query: 498 EVVED---PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
E+ + P V T I+ + K + A + +M P+ Y LI +
Sbjct: 620 EMSREGCSPNVVTYT----CFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAF 675
Query: 555 VTAEQYFSVLMMWHEIKRK 573
+ ++ E+K++
Sbjct: 676 CNTGEMNRAEALFDEMKQE 694
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 153/361 (42%), Gaps = 25/361 (6%)
Query: 255 NESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
N +FG + YA ++ V ++M ++G + ++SL+ K N+ A
Sbjct: 134 NVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIF 193
Query: 315 LLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSV 370
+ S FS + TY +++G+ + N+ + + E EP + +
Sbjct: 194 -------DKMNSRFSPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIV----TY 242
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
G + S C G ++A ++ +M + GC +Y + Y E R +A +D+
Sbjct: 243 GIMVDSLC-KTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDME 301
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
G+ D+ Y+AL+ A ++ F++AF + DM I ++ I+ L+ R +
Sbjct: 302 KDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRDD 361
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+++ + + T + +I FC+ ++E A + + M QF P+ T+ L
Sbjct: 362 EAYKVFRRMIKCCQPDCDT--YTMMIKMFCENDKVEMALKVWKYMRLKQFLPSMHTFSVL 419
Query: 551 INGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVE 610
ING + ++ ++ +KGI+ + L+K G D + +VE
Sbjct: 420 INGLCDKREVSQACVLLEDMI-------EKGIRPPGSTFGKLRQLLLKEGRKDVLDFLVE 472
Query: 611 K 611
K
Sbjct: 473 K 473
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 162/391 (41%), Gaps = 23/391 (5%)
Query: 185 VDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVI 244
+ C + + L++ E + E + + PN++ N+A+E C G Q A ++
Sbjct: 151 ITTCGRQGQWEKALELLRE-----IPEQ-EGVSPNVFCYNSAIEACGSGDQ-WEIAVSLL 203
Query: 245 ETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKL 304
M+ V P+E S+ G E+++ L M G + + Y+S+I+G K
Sbjct: 204 REMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKE 263
Query: 305 GNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLANLI--IEAQKLE 360
G + A + M + ET Y ++ ++G K ++ +E+Q +
Sbjct: 264 GQWKEALSVLT------EMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVT 317
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
P I D + I AC G + + +LDEM G + + + A K +
Sbjct: 318 PDVISYDAA-----IKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWE 372
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
+A +L+ ++++ GL D ++++ I A S ++ A L ++M R+ SY + +
Sbjct: 373 KAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAI 432
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
+ + E MA L + + N I A + GR ++ LR+M
Sbjct: 433 EACGKGGQWE-MALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGL 491
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
PN TY S I Q+ L + ++K
Sbjct: 492 TPNVITYNSAIKTCGKGGQWEKALDLLAKMK 522
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 139/347 (40%), Gaps = 44/347 (12%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
+Y +K + G + + L+ E + G+ D +I+ C G +A S+L
Sbjct: 217 SYNSAIKACGRGGQWERVIGLLREMPSV---GLTPDAITYNSVITGCGKEGQWKEALSVL 273
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
EM+A G + Y ++A + R EA +++ + S G+ DV +YDA I+A
Sbjct: 274 TEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGG 333
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
++++ L +M + + + + + + E L EV T
Sbjct: 334 GQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDAT-S 392
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+NS I A K+GR ++A L+ M + +P+ +Y S I Q+ L E++
Sbjct: 393 FNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMAL----ELR 448
Query: 572 RKISTDG---------------------QKGIKFEHNLVDAFLYALV-----------KG 599
R++ T G Q+G++ + L V KG
Sbjct: 449 RQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKG 508
Query: 600 GFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLK----VAKLRK 642
G ++ + ++ K +E+ + D Y A K+ + VA LR+
Sbjct: 509 GQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLRE 555
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 142/369 (38%), Gaps = 40/369 (10%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ + +AA++ C G Q + + +++ M+ GV PN F G EK
Sbjct: 316 VTPDVISYDAAIKACGGGGQWETSVD-LLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKA 374
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA-------------------SRTILL 316
VEL + G + ++S I+ K G + A + I
Sbjct: 375 VELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEA 434
Query: 317 CLGGGNMEQS-DFSKETYCEVVKGFLQNGNV------------KGLANLI-IEAQKLEPS 362
C GG E + + ++ + + + + N+ +GL L + AQ L P+
Sbjct: 435 CGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPN 494
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
I + + I C G +KA +L +M + Y + A K R EA
Sbjct: 495 VITYNSA-----IKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEA 549
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
L+ ++ GL DV +Y A I+A + ++ A L R M + +Y +++
Sbjct: 550 VALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKA 609
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
E L E+ E V +N I A K GR E+A LR M P
Sbjct: 610 CGRGGEWEKALDLLKELKETA-VAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTP 668
Query: 543 NDQTYLSLI 551
+ +Y S I
Sbjct: 669 DVISYTSAI 677
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 114/288 (39%), Gaps = 12/288 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ PN+ + N A+ C + +++ M G+ PN ++ G EK
Sbjct: 456 LTPNVISSNIAIRACGE-RGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKA 514
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
++L + M E + + Y+S I+ K G + A +L + G + S Y
Sbjct: 515 LDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAV-ALLREMPGQGLTPDVIS---YTA 570
Query: 336 VVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
+ + +NG + L+ + + L P+ I + +I AC G +KA +L E
Sbjct: 571 AIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNS-----VIKACGRGGEWEKALDLLKE 625
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
+ + L Y + A K R EA L+ ++ + GL DV +Y + I A +
Sbjct: 626 LKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGE 685
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
++ A L M + SY + + R E + E+ +
Sbjct: 686 WEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQ 733
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 87/444 (19%), Positives = 169/444 (38%), Gaps = 48/444 (10%)
Query: 161 AFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNI 220
A +L++ M +R +P E+ + C + + + + E + L P+
Sbjct: 199 AVSLLREM-ADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLT-------PDA 250
Query: 221 YACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
N+ + GC Q +A V+ MS G+ P S+ G ++ VE+
Sbjct: 251 ITYNSVITGCGKEGQ-WKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLR 309
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESA-------------------SRTILLCLGGG 321
M G + ++ Y + I G E++ + I+ C GG
Sbjct: 310 QMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGG 369
Query: 322 NMEQS-DFSKE-----------TYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSGIVVD 367
E++ + +E ++ + ++G K L+ E A++L+P I +
Sbjct: 370 QWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYN 429
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+ I AC G + A + +M G + + ++A + R E +L+
Sbjct: 430 SA-----IEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLR 484
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ + GL +V Y++ I+ ++ A L M+E + +Y + + +
Sbjct: 485 QMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRG 544
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
R + A L E+ + + + I A+ K G+ E A LR+M PN TY
Sbjct: 545 RWKEAVALLREM-PGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITY 603
Query: 548 LSLINGYVTAEQYFSVLMMWHEIK 571
S+I ++ L + E+K
Sbjct: 604 NSVIKACGRGGEWEKALDLLKELK 627
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 160/400 (40%), Gaps = 29/400 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
+ P++ N+ + C +++ AE + M V PN ++ L Y Y+ G ++
Sbjct: 250 IPPDLVTYNSVVHALCKA-RAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEA 308
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
V + M +V S L+ K G ++ A R + + FS Y
Sbjct: 309 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA-RDVFDTMAMKGQNPDVFS---YNI 364
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ G+ G + + +L + GI D +I A N G+ DKA I +EM
Sbjct: 365 MLNGYATKGCLVDMTDLF---DLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 421
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G + Y + A C+ + +A + + G+ D Y+ LI+ T
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 481
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD---- 511
A L ++ ++ + +I+ L + R +M A + + D V V H
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGR--VMDA---QNIFDLTVNVGLHPDAVV 536
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
++ ++ +C G++E A R M+ EPN Y +L+NGY + L ++ E+
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML 596
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
Q+GIK LY+++ G F A V K
Sbjct: 597 -------QRGIK-----PSTILYSIIIDGLFQAGRTVPAK 624
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 76/394 (19%), Positives = 150/394 (38%), Gaps = 58/394 (14%)
Query: 230 CCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSS 289
C YG + +A V +TM++ G P+ S+ + YA KG + +L LM G +
Sbjct: 335 CKYG--KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
++ LI Y G L+ A
Sbjct: 393 DFYTFNVLIKAYANCGMLDKA--------------------------------------- 413
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
+I ++ G+ D +I+A +G D A ++M G + Y
Sbjct: 414 ---MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 470
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ +C +A +L+ +I ++G+ LD+ + ++I A ++F +
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLE 526
+ Y +M G + E D +V +P V V + ++++ +CK GR++
Sbjct: 531 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV----YCTLVNGYCKIGRID 586
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEH 586
+ R M+ +P+ Y +I+G A + + +HE+ + GI +
Sbjct: 587 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMT-------ESGIAMDI 639
Query: 587 NLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVD 620
+ L L K FD + + ++ + M V ++
Sbjct: 640 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 149/393 (37%), Gaps = 55/393 (13%)
Query: 211 ENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKG 270
+N D NI A +GC + D + + M G+ P+ +F L YA G
Sbjct: 355 QNPDVFSYNIMLNGYATKGC------LVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 408
Query: 271 LQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
+ +K + + + M + G +V Y ++I+ ++G ++ A + G K
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD----K 464
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEA----------------QKLEPSGIVVDRSVGFGI 374
Y +++GF +G++ LI E L G V+D I
Sbjct: 465 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ---NI 521
Query: 375 ISACVNLGLS-------------------DKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
VN+GL +KA + D M + G + VY + YCK
Sbjct: 522 FDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCK 581
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
R E L ++ G++ Y +I+ + A F +M E+ I +
Sbjct: 582 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICT 641
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
Y ++ GL +N R A FL + + V++ N++I + R+E+AK +
Sbjct: 642 YNIVLRGLFKN-RCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI 700
Query: 536 IFLQFEPNDQTYLSLINGYVT------AEQYFS 562
+ P+ TY +I + AE FS
Sbjct: 701 SRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFS 733
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 4/202 (1%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS- 432
++ C + A + ++ G V + + L+ +C+ RT EA +++ +
Sbjct: 117 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPEL 176
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE--ARIYDLKGSYLTIMTGLMENHRPE 490
G DV +Y L+++ A L R M E A +Y T++ G +
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 236
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
E+V+ + +NS++HA CKA ++ A+ LR+M+ + PN+ TY +L
Sbjct: 237 KACDLFKEMVQRG-IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 295
Query: 551 INGYVTAEQYFSVLMMWHEIKR 572
I GY + Q+ + ++ E++R
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMRR 317
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 88/236 (37%), Gaps = 11/236 (4%)
Query: 234 LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVF 293
L V DA+ + + +G+ P+ + L Y L G EK + + M G +V
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 571
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEVVKGFLQNGNVKGLAN 351
Y +L++GY K+G ++ M Q T Y ++ G Q G
Sbjct: 572 YCTLVNGYCKIGRIDEGLSLF------REMLQRGIKPSTILYSIIIDGLFQAGRTVPAK- 624
Query: 352 LIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
++ ++ SGI +D ++ D+A + E+ A + + +
Sbjct: 625 --VKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMID 682
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
+ R EA L IS S L V Y +I I + A +F M+ A
Sbjct: 683 GMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 166/423 (39%), Gaps = 27/423 (6%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ- 272
D ++ IY N+ + G C +S AE + M G+ P ++F L Y K LQ
Sbjct: 422 DGIRETIYPYNSLINGHC-KFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYC-KDLQV 479
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE- 331
EK +L MNE + + +++LI G + AS+ L +E+ E
Sbjct: 480 EKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASK-----LFDEMVERKIKPTEV 534
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
TY +++G+ + N+ L+ + + +G+V D +IS + G A +
Sbjct: 535 TYNVMIEGYCKAHNMDKAFELL---EDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFI 591
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
D+++ + Y L YC + R EA ++ G+ +D+ + LI+ ++
Sbjct: 592 DDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQ 651
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVK 508
QD + F L + M + + Y +++ + + LD +V + P V
Sbjct: 652 QDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVT- 710
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWH 568
+ + ++ CK G ++ A +M+ PN TY ++ + H
Sbjct: 711 ---YTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHH 767
Query: 569 EIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAF 628
E+ KG+ + + K G +V+ + E +F D Y
Sbjct: 768 EM--------LKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTII 819
Query: 629 MEN 631
E+
Sbjct: 820 YEH 822
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 154/401 (38%), Gaps = 63/401 (15%)
Query: 194 FVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVR 253
F+ +VF+E + KP+ Y C+A + C L+ A++ +L +
Sbjct: 199 FILVWEVFDESVNAGV-------KPDPYTCSAVIRSLC-ELKDFCRAKE-----KILWME 245
Query: 254 PNESSFGFLAYLYALKGLQEKIVELESL-----MNEFGFSSQMVFYSSLISGYVKLGNLE 308
N + Y + GL + LE+L + E G +V Y +L+ G+ ++ +
Sbjct: 246 SNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFD 305
Query: 309 SASRTILLCLGGGNMEQSDFSKETYCE-VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
+CL +E E +V G + GN+ +L++ KL G + +
Sbjct: 306 DG-----ICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVV---KLGRFGFLPN 357
Query: 368 RSVGFGIISA------------------CVNLGLSDKAHSIL-----------------D 392
V +I+A +NL L+D +SIL
Sbjct: 358 LFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFG 417
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M G + Y + +CK + A L + + GL+ + LI
Sbjct: 418 RMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDL 477
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
+ AF L+R+M E I ++ ++ GL + + DE+VE +++ +
Sbjct: 478 QVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVE-RKIKPTEVTY 536
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
N +I +CKA ++ A L M+ P+ TY LI+G
Sbjct: 537 NVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISG 577
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 146/349 (41%), Gaps = 39/349 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QEKI 275
P+I+ACN + C + DA +++E M G P+ + Y + GL +K
Sbjct: 261 PDIWACNIYIYYLC-KQNRLPDALQMVEKMRTKGTSPD-----VVTYQTVVSGLCDNKKF 314
Query: 276 VELESLMNEF---GFSSQMVFYSSLISGYVKLGNL----ESASRTILLCLGGGNMEQSDF 328
E L E + +LI G K + E ASR + L +
Sbjct: 315 AEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTL--------DIEL 366
Query: 329 SKETYCEVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
S Y ++ GF + G++ +I + EP +V ++ +++ +G+ +K
Sbjct: 367 SVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPD--IVTYNI---LLNHYCTIGMMEK 421
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A ++ +M G + Y LK CK H+ +A V D G D + + LI+
Sbjct: 422 AEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILID 481
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME----NHRPELMAAFLDEVVED 502
A ++ +SA LF++M + +Y T++ GL N EL L+ + D
Sbjct: 482 AFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQI-D 540
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI 551
P V + +N ++H CK G + A+ MI + P+ T+ +LI
Sbjct: 541 PNVNL----YNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLI 585
>gi|224080263|ref|XP_002306075.1| predicted protein [Populus trichocarpa]
gi|222849039|gb|EEE86586.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 9/227 (3%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA--CVNLGLSDKAHS 389
++ E++ GF +NG V+ + + E ++ G V + +G++ A C LS+ A
Sbjct: 249 SFNELMVGFYRNGEVEMVEEIWSEMERF---GCVAN-GFSYGVLIAVFCEGGRLSE-AER 303
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ DEM G + Y + +CK +A L ++ SG++ ++ LIE
Sbjct: 304 LWDEMRVKGIMPDVVAYNTIIGGFCKAGEVEKAEGLFREMGLSGIESSCVTFEHLIEGYC 363
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIMT-GLMENHRPELMAAFLDEVVEDPRVEVK 508
D SA +++DMR R + L+ + ++ GL E R + + D
Sbjct: 364 RIGDVNSAILVYKDMRR-RDFRLEALTMEVLIGGLCEQKRVFEALKIMRSAMRDVSFHPN 422
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+ +I+ C+ G++E+A + M+ F+PN Y + I GYV
Sbjct: 423 GKSYELLINGLCEDGKMEEALKLQSEMVGKGFDPNSAIYGAFIEGYV 469
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N+II FCKAG +E A+ R M E + T+ LI GY S ++++ +++
Sbjct: 320 YNTIIGGFCKAGEVEKAEGLFREMGLSGIESSCVTFEHLIEGYCRIGDVNSAILVYKDMR 379
Query: 572 RK 573
R+
Sbjct: 380 RR 381
>gi|357140650|ref|XP_003571877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Brachypodium distachyon]
Length = 753
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 147/369 (39%), Gaps = 44/369 (11%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF------------------ 259
P+ CN + C G Q +S A V+E M G PN +F
Sbjct: 359 PDTITCNMLIAQLCRGGQ-LSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAIT 417
Query: 260 --------GFLAY---------LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
G+ Y L K ++ +E+ ++ G +V Y++LIS
Sbjct: 418 FWKEQLRIGWPPYVMTNTLLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASC 477
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
K L+ A +TIL L +E + TYC ++ + +L+ ++
Sbjct: 478 KADRLKDA-KTILTRLIAEGLEPN---STTYCILLHSLCNKRRWAEVCDLLAHMKRANCE 533
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
V ++ I+ G D+A +L++M + C + Y L A KE EA
Sbjct: 534 PDVTAYNI---FINYFCKYGHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEA 590
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+ I +G QL + Y+ LI+A + + A LF +M RI +Y +++ G
Sbjct: 591 LVIAHFIRQNGWQLVLITYNTLIDALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMG 650
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
+ + E L+ + +VKT + +I A C+ G++E A LR M+
Sbjct: 651 FCKKNMSEEALELLNRTLA-LGFQVKTTTFIMVIQALCRDGKVEAAAEILRVMVSETNNT 709
Query: 543 NDQTYLSLI 551
N YLS++
Sbjct: 710 NSSFYLSIV 718
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 121/285 (42%), Gaps = 24/285 (8%)
Query: 338 KGFLQNGNVKGLAN--LIIEA----QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
KG L GN++ N +I+A ++ G + D +I V G ++KA +L
Sbjct: 290 KGMLYLGNLRRYCNNGKLIQACCVIDEMVLHGQIPDSKCCIRLIRGLVKTGKANKARQVL 349
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+ M G + C+ + + A ++ D+ SG + ++ LI
Sbjct: 350 EVMVLSGGIPDTITCNMLIAQLCRGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQ 409
Query: 452 QDFQSAFSLFRDMREARI----YDLKGSYLTIMTGLMENHRPELMAAFLDEV-VEDPRVE 506
+ A + +++ + RI Y + + L + + + + LDE+ +E + +
Sbjct: 410 HMYDKAITFWKE--QLRIGWPPYVMTNTLLVDL--ICKKCGSKRAMEVLDELSLEGCQPD 465
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
V T+ N++I A CKA RL+DAK L R+I EPN TY L++ ++ V +
Sbjct: 466 VVTY--NALISASCKADRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNKRRWAEVCDL 523
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEK 611
+KR + + + F+ K G D + V+EK
Sbjct: 524 LAHMKR-------ANCEPDVTAYNIFINYFCKYGHLDQAIDVLEK 561
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 133/346 (38%), Gaps = 31/346 (8%)
Query: 297 LISGYVKLGNLESASRTI-LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
LI G VK G A + + ++ L GG C ++ L G A ++E
Sbjct: 332 LIRGLVKTGKANKARQVLEVMVLSGG------IPDTITCNMLIAQLCRGGQLSSAMSVLE 385
Query: 356 AQK---LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT--- 409
+ P+GI + +I N + DKA + E +G YV T
Sbjct: 386 DMRYSGTSPNGITFNT-----LIRCMCNQHMYDKAITFWKEQ----LRIGWPPYVMTNTL 436
Query: 410 -LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
+ CK+ + A +++ ++S G Q DV Y+ALI AS + + A ++ +
Sbjct: 437 LVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASCKADRLKDAKTILTRLIAEG 496
Query: 469 IYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
+ +Y ++ L R + L + + E +N I+ FCK G L+ A
Sbjct: 497 LEPNSTTYCILLHSLCNKRRWAEVCDLLAHM-KRANCEPDVTAYNIFINYFCKYGHLDQA 555
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNL 588
L +M+ + P+ TY +L+N L++ H I+ Q G +
Sbjct: 556 IDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHFIR-------QNGWQLVLIT 608
Query: 589 VDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKK 634
+ + AL G M + ++ ++ D Y M KK
Sbjct: 609 YNTLIDALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMGFCKK 654
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 149/359 (41%), Gaps = 18/359 (5%)
Query: 144 TVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVD-ICRKNSNFVAFLKVFE 202
T +TL+ M N + A K + + P+ + LVD IC+K + A ++V +
Sbjct: 398 TFNTLIRCMCNQHMYDKAITFWKEQLRIGW-PPYVMTNTLLVDLICKKCGSKRA-MEVLD 455
Query: 203 ECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL 262
E +L+ +P++ NA + C + DA+ ++ + G+ PN +++ L
Sbjct: 456 EL-------SLEGCQPDVVTYNALISASCKA-DRLKDAKTILTRLIAEGLEPNSTTYCIL 507
Query: 263 AYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGN 322
+ K ++ +L + M + Y+ I+ + K G+L+ A + +
Sbjct: 508 LHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFINYFCKYGHLDQAIDVLEKMVS--- 564
Query: 323 MEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLG 382
++ TY ++ + G V+ ++ A + +G + +I A N G
Sbjct: 565 -DKCCPDIVTYNTLLNAISKEGMVE---EALVIAHFIRQNGWQLVLITYNTLIDALANKG 620
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
KA + DEM + S Y + +CK++ + EA +L+ + G Q+ +
Sbjct: 621 EVKKAMVLFDEMASGRISPDDITYGSLVMGFCKKNMSEEALELLNRTLALGFQVKTTTFI 680
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE 501
+I+A ++A + R M YL+I+ + ++ R E E+++
Sbjct: 681 MVIQALCRDGKVEAAAEILRVMVSETNNTNSSFYLSIVRRVAKSGRIEEAERLHQELID 739
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 135/326 (41%), Gaps = 16/326 (4%)
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV 292
G V +E+ ++ + V + PN F G K ++ M E G
Sbjct: 300 GYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCF 359
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFLQNGNVKGLA 350
Y+++++GY K+ ++ +A + + G M + S TY ++ + GN++
Sbjct: 360 SYTTMMAGYCKVKDISNALKYL------GKMLKRGIRPSVATYTLLIDSCCKPGNMEMAE 413
Query: 351 NLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTL 410
L Q++ G+V D +++ G KA +L M + G S L Y +
Sbjct: 414 YLF---QRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILI 470
Query: 411 KAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIY 470
K EA ++ +++ G DV + +I +F+ AF LF M E +
Sbjct: 471 HGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSE---H 527
Query: 471 DLKGSYLTIMTGLMENHRPELMAA--FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDA 528
L+ +T L R MA L + D ++ +NS+IH FC G ++DA
Sbjct: 528 HLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDA 587
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGY 554
+ MI PN+ T+ +L+ GY
Sbjct: 588 CHLVSMMIEHGIMPNNITHHALVLGY 613
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 105/274 (38%), Gaps = 48/274 (17%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M G S ISGY GN+++ +
Sbjct: 212 MKSQGLGLNASIISLFISGYCSQGNIDTGWK----------------------------- 242
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
L++E + L VV ++ +I + + L +A SIL +M G +
Sbjct: 243 ----------LLMEMKYLGIKPDVVAYTI---VIDSLCKMSLLKEATSILFKMTQMGVFL 289
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ YCK ++ EA + + L ++ +++ I T + A +F
Sbjct: 290 DSVSVSSVVDGYCKVGKSEEAMDV---LEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVF 346
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKTHDWNSIIHAFC 520
+DM E + SY T+M G + +L ++++ R V T + +I + C
Sbjct: 347 QDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVAT--YTLLIDSCC 404
Query: 521 KAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
K G +E A+ +RMI P+ +Y +L+NGY
Sbjct: 405 KPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGY 438
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 157/364 (43%), Gaps = 18/364 (4%)
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
M G P+ ++ L G ++ ++ +M G + Y++LISG + L
Sbjct: 358 MEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRR 417
Query: 307 LESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN-GNVKGLANLIIEAQKLEPSGIV 365
L+ A NME + Y V+ F+ G + + +K++ GI+
Sbjct: 418 LDEALELF------NNMESLGVAPTAYSYVL--FIDYYGKLGDPEKALDTFEKMKKRGIM 469
Query: 366 VDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL 425
+ + + +G +A I ++++ CG S Y +K Y K + +AT+L
Sbjct: 470 PSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKL 529
Query: 426 VMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+ ++ S G + D+ ++LI+ + A+ +F +++ ++ +Y ++TGL +
Sbjct: 530 LTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGK 589
Query: 486 NHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+ L A L +++ T +N+++ CK ++ A + RM + P+
Sbjct: 590 EGK-LLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVL 648
Query: 546 TYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAV 605
TY ++I G + + +H++K+ +S D H + L +VK G +
Sbjct: 649 TYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPD--------HVTLYTLLPGVVKDGRVEDA 700
Query: 606 MQVV 609
+++V
Sbjct: 701 IKIV 704
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 122/669 (18%), Positives = 239/669 (35%), Gaps = 129/669 (19%)
Query: 83 NTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL----------QDNHNLKRAFASVVY- 131
+ ++A +F+ + + PS N+ + L+ + D HN + SV Y
Sbjct: 452 DPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYN 511
Query: 132 ----------VIEKNPKLL----------DFQTVHTLLGSMRNANTAAPAFALVKCMFKN 171
I+K KLL D V++L+ ++ A A+ + K+
Sbjct: 512 MMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFG-RLKD 570
Query: 172 RYFMPFELWGGFLVDICRKNSNFVAFLKVF----EECCRIALDENLDFMKPNIYACNAAL 227
P + L+ K + L +F E C PN NA L
Sbjct: 571 LKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGC-----------PPNTVTFNALL 619
Query: 228 EGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGF 287
+ C +V A K+ M+++ P+ ++ + Y +G M +F
Sbjct: 620 DCLCKN-DAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLS 678
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK 347
+ Y+ L+ G VK G +E A + ++ + ++ S+ + + E+++ L ++
Sbjct: 679 PDHVTLYT-LLPGVVKDGRVEDAIKIVMEFVHQSGLQTSN---QVWGELMECILIEAEIE 734
Query: 348 -------GLA--------NLII--------EAQKLEPSGIVVDRSVGFG----------I 374
GL NLI+ + + L+ + + G +
Sbjct: 735 EAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCL 794
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
+ + +++ A + EM GC + Y L A+ K R E +L ++ G
Sbjct: 795 MDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGC 854
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+ ++ ++ +I A + S A L+ ++ +Y ++ GL++ R E
Sbjct: 855 KPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMK 914
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAG------------------------------- 523
+E+ D + + +N +I+ F KAG
Sbjct: 915 IFEEM-PDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECL 973
Query: 524 ----RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQ 579
R++DA + +P+ +Y +ING + + L ++ E+K
Sbjct: 974 FMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMK-------N 1026
Query: 580 KGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAK 639
+GI E +A + G D ++ E+ Q M + + + Y A + H K
Sbjct: 1027 RGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTY-NALIRGHSKSGNKD 1085
Query: 640 LRKRNFKKM 648
FKKM
Sbjct: 1086 RAFSVFKKM 1094
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 72/377 (19%), Positives = 135/377 (35%), Gaps = 54/377 (14%)
Query: 243 VIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYV 302
++E M LG+RPN ++ + G + + M + G +V Y+ LI
Sbjct: 249 LLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALC 308
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
G L+ A KE Y K+ S
Sbjct: 309 AAGKLDKA-------------------KELY-----------------------TKMRAS 326
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
D ++S N G + EM A G + + Y ++A CK + +A
Sbjct: 327 SHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQA 386
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
++ + G+ ++ Y+ LI + + A LF +M + SY+ +
Sbjct: 387 FDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDY 446
Query: 483 LMENHRPELMAAFLD--EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
+ PE LD E ++ + N+ +++ + GR+ +AK +
Sbjct: 447 YGKLGDPE---KALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGL 503
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
P+ TY ++ Y A Q + E+ +S + I ++L+D L K G
Sbjct: 504 SPDSVTYNMMMKCYSKAGQIDKATKLLTEM---LSEGCEPDIIVVNSLID----TLYKAG 556
Query: 601 FFDAVMQVVEKSQEMKV 617
D Q+ + +++K+
Sbjct: 557 RVDEAWQMFGRLKDLKL 573
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 137/348 (39%), Gaps = 35/348 (10%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P + N ++G G A K+ M G PN ++ L + G ++I E
Sbjct: 786 PTPESYNCLMDGL-LGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAH---GKSKRIDE 841
Query: 278 LESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--T 332
L L NE G ++ ++ +IS VK ++ A + G DFS T
Sbjct: 842 LFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISG------DFSPTPCT 895
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQ--KLEPSGIVVDRSV-GFGIISACVNLGLSDKAHS 389
Y ++ G L+ G + + E + +P+ + + + GFG G + A
Sbjct: 896 YGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFG------KAGNVNIACD 949
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASI 449
+ M G L Y ++ R +A ++ +GL D +Y+ +I
Sbjct: 950 LFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLG 1009
Query: 450 TSQDFQSAFSLFRDMREARIYDLKGSYLTIM-----TGLMENHRPELMAAFLDEVVEDPR 504
S+ + A SLF +M+ I +Y ++ G+++ A + E ++
Sbjct: 1010 KSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQ------AGKMFEELQFMG 1063
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
+E +N++I K+G + A ++M+ + PN T+ L N
Sbjct: 1064 LEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 11/203 (5%)
Query: 369 SVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMD 428
S+ GI A LG +A +L+ + G +Y +CKE A ++
Sbjct: 168 SIKGGIRQAPFALGKMRQAGFVLNAYSYNGL-----IYFLLQPGFCKE-----ALKVYKR 217
Query: 429 ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR 488
+ S GL+ + Y AL+ A +D + L +M + +Y + L R
Sbjct: 218 MISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGR 277
Query: 489 PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYL 548
+ L + +ED + +I A C AG+L+ AK +M +P+ TY+
Sbjct: 278 IDDAYGIL-KTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYI 336
Query: 549 SLINGYVTAEQYFSVLMMWHEIK 571
+L++ + +V W E++
Sbjct: 337 TLMSKFGNYGDLETVKRFWSEME 359
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 145/363 (39%), Gaps = 44/363 (12%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY----------LYALKGLQE 273
N + G C GL V +A ++++ M + G P+ ++GFL YA+ G
Sbjct: 254 NDVVLGLC-GLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVP 312
Query: 274 KI---------------------VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
++ EL +M G + Y+ L+ G KLG SA R
Sbjct: 313 EVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVR 372
Query: 313 TILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
+ ME+ + TY ++ F +NG ++ ++ G ++
Sbjct: 373 ML------DEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAML---DQMSAKGFSMNSQG 423
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
GII A G D+A ++ EM + GC + Y + C + EA + ++
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
G+ + Y+ LI A + S +Q L +M SY ++ L + +
Sbjct: 484 EEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVD 543
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
L+E++ ++ +N +I+ CKAG++ DA + M+ P+ TY +L
Sbjct: 544 RSMMLLEEMMTK-GIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTL 602
Query: 551 ING 553
ING
Sbjct: 603 ING 605
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 102/254 (40%), Gaps = 15/254 (5%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G V D + +I A V G +A ++LDEM GC+ + + + C EA
Sbjct: 210 GCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREA 269
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+LV + G V Y L+ ++ A+++ + E + L T++ G
Sbjct: 270 ARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLN----TVIRG 325
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
+ + A L E++ H +N ++H CK GR A R L M P
Sbjct: 326 CLAEGKLA-RATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAP 384
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFF 602
N TY +L++ + MW + + + KG + +YAL K G
Sbjct: 385 NIVTYSTLLHSFCRNG-------MWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKL 437
Query: 603 DAVMQVVEKSQEMK 616
D M++V QEMK
Sbjct: 438 DEAMRLV---QEMK 448
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 142/343 (41%), Gaps = 19/343 (5%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+++ N + G C L A ++++ M G PN ++ L + + G+ +
Sbjct: 349 PDVHTYNILMHGLCK-LGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARA 407
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ M+ GFS Y+ +I K G L+ A R + M+ + TY
Sbjct: 408 MLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLV------QEMKSQGCKPDICTYNT 461
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ N + ++ L G+V + +I A ++ G + + +EM
Sbjct: 462 IIYHLCNNDQMDEAEHIF---GNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMV 518
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GC + + Y +KA CKE + L+ ++ + G++ + +Y+ LI + +
Sbjct: 519 LHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVR 578
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLME---NHRPELMAAFLDEVVEDPRVEVKTHDW 512
A L ++M + +Y T++ GL + H A L E + + V +
Sbjct: 579 DALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH----AALNLLEKLPNENVHPDIVTY 634
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
N +I CK L+DA L + + PN++T+ ++ +V
Sbjct: 635 NILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFV 677
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 164/435 (37%), Gaps = 54/435 (12%)
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
D + P + A C L DA ++ M+ G P+ + + ++AL Q
Sbjct: 174 DRVPPTTFTFGVAARALCR-LGRARDALALLRGMARHGCVPD--AVLYQTVIHALVA-QG 229
Query: 274 KIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTI---------------- 314
+ E +L++E G ++ + ++ ++ G LG++ A+R +
Sbjct: 230 GVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYG 289
Query: 315 LLCLGGGNMEQSDFSKETYC--------------EVVKGFLQNGNVKGLANLIIEAQKLE 360
L G Q+D E Y V++G L G + L + +
Sbjct: 290 FLLRGLCRTRQAD---EAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELY---EMMG 343
Query: 361 PSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTA 420
G D ++ LG A +LDEM GC+ + Y L ++C+
Sbjct: 344 SKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWD 403
Query: 421 EATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM 480
+A ++ +S+ G ++ Y+ +I A A L ++M+ +Y TI+
Sbjct: 404 DARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTII 463
Query: 481 TGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
L N + + ++E+ V +N++IHA +GR ++ R M+
Sbjct: 464 YHLCNNDQMDEAEHIFGNLLEE-GVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGC 522
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
+ +Y LI +M+ E+ T G K F +N+ + L K G
Sbjct: 523 PLDVVSYNGLIKALCKEGNVDRSMMLLEEMM----TKGIKPNNFSYNM---LINELCKAG 575
Query: 601 FFDAVMQVVEKSQEM 615
V +E S+EM
Sbjct: 576 ---KVRDALELSKEM 587
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 140/328 (42%), Gaps = 15/328 (4%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFG-FSSQMVFYS 295
V +A K+ M G +P S+F L + + G + ++L +M + G Y+
Sbjct: 129 VHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYN 188
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
LI + LE A + + G Q D TY + + F QNG LI++
Sbjct: 189 ILIQAWCTKNELEEAWNVMHKMVNSG--MQPDIV--TYNTLARAFAQNGETDNAERLILK 244
Query: 356 AQ----KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLK 411
Q K++P+ +R+ G I C +++ A L +M G V+ +K
Sbjct: 245 MQQYNNKVKPN----ERTCGIIIRGYCKEGNMTE-ALRFLYKMKELGVHPNPVVFNSLIK 299
Query: 412 AYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
Y T + + + G++ DV Y ++ A +S + +F DM +A I
Sbjct: 300 GYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEP 359
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRT 531
+Y + G + +P+ A L+ + + ++ + +II +C AG+++ A R
Sbjct: 360 DIQAYSILAKGYVRAGQPDKAEALLNSMTKY-GLQANVVIFTTIISGWCAAGKMDCALRL 418
Query: 532 LRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+M + N +TY +LI GY A+Q
Sbjct: 419 YEKMNEMGTPLNLKTYETLIWGYGEAKQ 446
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 2/200 (1%)
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
K+E +G+ D + +I+A + G +A I +M CGC + +K +
Sbjct: 103 KVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVG 162
Query: 418 RTAEATQLV-MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R EA +L+ M I ++ + Y+ LI+A T + + A+++ M + + +Y
Sbjct: 163 RPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTY 222
Query: 477 LTIMTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRM 535
T+ +N + + ++ + + +V+ II +CK G + +A R L +M
Sbjct: 223 NTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKM 282
Query: 536 IFLQFEPNDQTYLSLINGYV 555
L PN + SLI GY+
Sbjct: 283 KELGVHPNPVVFNSLIKGYL 302
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 79/181 (43%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
++S + G +A +I + + G + Y + A + R L+ + +G
Sbjct: 49 LMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENG 108
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ D ++A+I A S A +FR M+E ++ T++ G RP
Sbjct: 109 VKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAM 168
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
L+ +++D V+ +N +I A+C LE+A + +M+ +P+ TY +L
Sbjct: 169 KLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARA 228
Query: 554 Y 554
+
Sbjct: 229 F 229
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 123/308 (39%), Gaps = 40/308 (12%)
Query: 217 KPNIYACNAALEGCCYGL-QSVSDAEKVIETMSVLG-VRPNESSFGFLAYLYALKGLQEK 274
KP N ++G +G+ +A K++E M G V+PNE ++ L + K E+
Sbjct: 145 KPTTSTFNTLIKG--FGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEE 202
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
+ M G +V Y++L + + G ++A R IL N + + + T
Sbjct: 203 AWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPN--ERTCG 260
Query: 335 EVVKGFLQNGN--------------------------VKGLANL-----IIEAQKL-EPS 362
+++G+ + GN +KG ++ + EA L E
Sbjct: 261 IIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEF 320
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
GI D I++A + GL D I D+M + Y K Y + + +A
Sbjct: 321 GIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKA 380
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE-ARIYDLKGSYLTIMT 481
L+ ++ GLQ +V + +I + A L+ M E +LK +Y T++
Sbjct: 381 EALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLK-TYETLIW 439
Query: 482 GLMENHRP 489
G E +P
Sbjct: 440 GYGEAKQP 447
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 64/374 (17%), Positives = 143/374 (38%), Gaps = 65/374 (17%)
Query: 251 GVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA 310
GV+P+ F + ++ G + +++ M E G +++LI G+ +G A
Sbjct: 108 GVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEA 167
Query: 311 SRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
+ + + + GN++ ++ TY +++ + ++ N++ K+ SG+ D
Sbjct: 168 MKLLEMMIQDGNVKPNE---RTYNILIQAWCTKNELEEAWNVM---HKMVNSGMQPDIVT 221
Query: 371 GFGIISACVNLGLSDKAHSILDEM---------NACGCSVGLGVYVPTLKAYCKEHRTAE 421
+ A G +D A ++ +M N C + ++ YCKE E
Sbjct: 222 YNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGI-------IIRGYCKEGNMTE 274
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A + + + G+ + +++LI+ + D M E I
Sbjct: 275 ALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGI------------ 322
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
+P+++ +++I++A+ +G +++ + M+ + E
Sbjct: 323 ------KPDVVT------------------YSTIMNAWSSSGLMDNCEEIFDDMVKAEIE 358
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
P+ Q Y L GYV A Q + + + + G++ + + G
Sbjct: 359 PDIQAYSILAKGYVRAGQPDKAEALLNSMTK-------YGLQANVVIFTTIISGWCAAGK 411
Query: 602 FDAVMQVVEKSQEM 615
D +++ EK EM
Sbjct: 412 MDCALRLYEKMNEM 425
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 167/430 (38%), Gaps = 96/430 (22%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN++ NA ++G C V A ++ M GV P+ ++ L + G E
Sbjct: 356 KPNVWTYNALVQGFC-NEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 414
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESA--------SRTIL------------L 316
L LM G + Y++LI+ K G + A +R I L
Sbjct: 415 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 474
Query: 317 CLGGG---------NMEQSDFSKETYCEVVKGFLQN-----GNVKGLANLIIEAQK-LEP 361
C G M + + +TY F+++ G+ +GL+ + QK ++P
Sbjct: 475 CKSGKADIAWKFLEKMVSAGCTPDTY--TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 532
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
S V+ ++ + N GL + EM + GC+ + Y +++AYC E R E
Sbjct: 533 S--TVNYTIVIHKLLKERNYGLVARTWG---EMVSSGCNPDVVTYTTSMRAYCIEGRLNE 587
Query: 422 ATQLVMDISSSGLQLDVGNYDALIE---------------------ASITSQ-------- 452
A ++M++S +G+ +D Y+ L++ AS+ +Q
Sbjct: 588 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 647
Query: 453 -----------------------DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+ F LF M++ G+Y +I+ G E+ R
Sbjct: 648 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 707
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
E + + + ED + + + +++ FCK+ R DA + MI F P +Y
Sbjct: 708 EEATSLVSLMKED-SISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQH 766
Query: 550 LINGYVTAEQ 559
L++G + Q
Sbjct: 767 LLSGLICEGQ 776
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 101/508 (19%), Positives = 192/508 (37%), Gaps = 79/508 (15%)
Query: 91 FKSLTANSLFP--SKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTL 148
SL+ L P +P SL+AHLS R FA ++ P T + +
Sbjct: 104 LHSLSPPPLRPLFDRPFA-SLLAHLSRFALAPLALRLFA---HMHRHAPPAPTAPTYNAV 159
Query: 149 LGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNS---------------- 192
+ S+ A A + M ++ + + +V CR N
Sbjct: 160 IRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGF 219
Query: 193 --NFVAFLKVFEECCRIA-LDENLDFM----KPNIYACNAALEGCCYGLQSVSDAEKVIE 245
+ V++ + E C +DE ++ +P+++ A ++G C + + ++
Sbjct: 220 AQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNA-ERGEEGLLMLR 278
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GFSSQMVFYSSLISGYV 302
M LG RP+ ++ A + + + K E E ++ E G + +V +++I+ Y
Sbjct: 279 RMKELGWRPSTRAY---AAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYC 335
Query: 303 KLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPS 362
K G + A R + L + + TY +V+GF G V
Sbjct: 336 KEGRMSDALRVLELM----KLRGCKPNVWTYNALVQGFCNEGKVH--------------- 376
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
KA ++L++M ACG + Y ++ C + A
Sbjct: 377 -----------------------KAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESA 413
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+L+ + GL D Y+ALI A A SLF + I ++ +++ G
Sbjct: 414 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 473
Query: 483 LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
L ++ + ++ FL+++V T+ ++S I CK ++ + M+ +P
Sbjct: 474 LCKSGKADIAWKFLEKMVS-AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 532
Query: 543 NDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+ Y +I+ + Y V W E+
Sbjct: 533 STVNYTIVIHKLLKERNYGLVARTWGEM 560
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D A + D+M G + + Y ++ C+ R EA +L ++ Q D+ Y AL
Sbjct: 205 DVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAAL 260
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED-- 502
++ ++ + + R M+E +Y ++ + + L E+ E
Sbjct: 261 VKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGL 320
Query: 503 -PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYF 561
P V T ++I+A+CK GR+ DA R L M +PN TY +L+ G+ +
Sbjct: 321 APCVVTCT----AVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 376
Query: 562 SVLMMWHEIK 571
+ + ++++
Sbjct: 377 KAMTLLNKMR 386
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 143/338 (42%), Gaps = 79/338 (23%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
+P+++ +A + C + A + + M G+ PN+ F L + ++ G + +
Sbjct: 307 RPDVFTYSALINALCKE-NKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
E M G +V Y++L++G+ K G+L A+R I+ + + K TY +
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL-VAARNIVDGMIRRGLRP---DKITYTTL 421
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ GF + G+V+ + ++++ +GI +DR VGF SA V
Sbjct: 422 IDGFCRGGDVETALEI---RKEMDQNGIELDR-VGF---SALV----------------- 457
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
CG CKE R +A + + ++ +G++ D Y +++A D Q+
Sbjct: 458 CG--------------MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQT 503
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
F L ++M+ + H P ++ +N ++
Sbjct: 504 GFKLLKEMQS------------------DGHVPSVVT------------------YNVLL 527
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ CK G++++A L M+ + P+D TY +L+ G+
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 105/524 (20%), Positives = 195/524 (37%), Gaps = 90/524 (17%)
Query: 143 QTVHTLLGSMRNANTAAPAF-ALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVF 201
Q++ L+ S + N+A+ F +LV+ M GFLVD + F+
Sbjct: 138 QSLIELVVSRKGKNSASSVFISLVE--------MRVTPMCGFLVDALMITYTDLGFIPDA 189
Query: 202 EECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGF 261
+C R++ D + GC L + K+ T ++ G GF
Sbjct: 190 IQCFRLSRKHRFD----------VPIRGCGNLLDRMM---KLNPTGTIWGFYMEILDAGF 236
Query: 262 LAYLYALKGLQEK------IVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASR 312
+Y L K I + + + +E +V +++LI+GY K+GNL+ R
Sbjct: 237 PLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFR 296
Query: 313 TILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF 372
ME+S + + L N + + K+
Sbjct: 297 L------KHQMEKSRTRPDVF-----------TYSALINALCKENKM------------- 326
Query: 373 GIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSS 432
D AH + DEM G ++ + + + + + S
Sbjct: 327 ------------DGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 433 GLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELM 492
GLQ D+ Y+ L+ + D +A ++ M + K +Y T++ G E
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 493 AAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
E+ ++ +E+ +++++ CK GR+ DA+R LR M+ +P+D TY +++
Sbjct: 435 LEIRKEMDQNG-IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 553 GYV---TAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVV 609
+ A+ F +L +++ +DG +N++ L L K G ++
Sbjct: 494 AFCKKGDAQTGFKLL-------KEMQSDGHVPSVVTYNVL---LNGLCKLGQMKNADMLL 543
Query: 610 EKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIA 653
+ + V D Y +H+ A KR +K E I
Sbjct: 544 DAMLNIGVVPDDITYNTLLEGHHRH---ANSSKRYIQKPEIGIV 584
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 111/258 (43%), Gaps = 19/258 (7%)
Query: 56 QQQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSS 115
+ Q +++ T+ ++ + ++ N D A F + L P+ + +LI H S
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI-HGHS 356
Query: 116 LQDNHNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFM 175
+L + + P ++ + T+ + G +N + A A +V M + R
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTL--VNGFCKNGDLVA-ARNIVDGMIR-RGLR 412
Query: 176 PFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDEN---LDFMKPNIYACNAALEGCCY 232
P ++ L+D + + L++ +E +D+N LD + + C EG
Sbjct: 413 PDKITYTTLIDGFCRGGDVETALEIRKE-----MDQNGIELDRVGFSALVCGMCKEG--- 464
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV 292
V DAE+ + M G++P++ ++ + + KG + +L M G +V
Sbjct: 465 ---RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV 521
Query: 293 FYSSLISGYVKLGNLESA 310
Y+ L++G KLG +++A
Sbjct: 522 TYNVLLNGLCKLGQMKNA 539
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 139/316 (43%), Gaps = 24/316 (7%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL-QEKIVELESLMNEF----GFSS 289
+ + DA +E M+ G++P+ + F+ L GL QE+ VE L+ E +
Sbjct: 23 KRIDDALATVEEMATRGIKPDAFIYNFV-----LSGLCQEEKVEEARLLFEKMVKQRINP 77
Query: 290 QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGL 349
+V Y++LI+G K +E+A G G + ++ +Y ++ GF + ++
Sbjct: 78 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVP----TEVSYNTLIDGFCKKKDLVAA 133
Query: 350 ANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
++ K+ S V + +I G A +LD M G + + Y
Sbjct: 134 KDVF---DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCL 190
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ +CK R EA +L+ + + G+ V Y+ L+ + + + AF LFR M + R
Sbjct: 191 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 250
Query: 470 YDLKGSYLTIMTGLMENHRPELMAA---FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLE 526
+ +Y T++ L H +L A + + + + + T+D ++ +AG++
Sbjct: 251 HPTVVTYNTLLRALC--HHKQLDGAHRLYAEMIAKGCPPDAITYD--TLAWGLTRAGKVH 306
Query: 527 DAKRTLRRMIFLQFEP 542
+A+ + +M + P
Sbjct: 307 EAQELMEKMKLTKRNP 322
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y P ++ CK R +A V ++++ G++ D Y+ ++ + + A LF M
Sbjct: 12 YGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV 71
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+ RI +Y T++ GL + R E E+ V + +N++I FCK L
Sbjct: 72 KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEV-SYNTLIDGFCKKKDL 130
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLING 553
AK +M+ PN TY +LI+G
Sbjct: 131 VAAKDVFDKMVRSNCVPNVVTYTTLIDG 158
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 406 YVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMR 465
Y + CK R A +L +++ G +Y+ LI+ +D +A +F M
Sbjct: 82 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 141
Query: 466 EARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRL 525
+ +Y T++ GL ++ + + A LD +V+ V ++ +I FCK R+
Sbjct: 142 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG-VTPNVATYSCLIDGFCKVRRV 200
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
++A + L +M+ P TY L+N A++
Sbjct: 201 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADK 234
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 93/239 (38%), Gaps = 22/239 (9%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPT-------LKAYCKEHRTAEATQLVMDISSSGLQLD 437
+ A+ + EM G YVPT + +CK+ A + + S +
Sbjct: 96 ETAYELFKEMAGKG-------YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPN 148
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
V Y LI+ S Q+A + M + + +Y ++ G + R + L+
Sbjct: 149 VVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLE 208
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
++V + +N ++++ C+A +LEDA + R M + P TY +L+
Sbjct: 209 QMVTQG-IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHH 267
Query: 558 EQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMK 616
+Q ++ E+ KG + D + L + G +++EK + K
Sbjct: 268 KQLDGAHRLYAEMI-------AKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTK 319
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
D Y ++E ++ A + +M I Y +++GL + + E
Sbjct: 8 DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 67
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+++V+ R+ +N++I+ CKA R+E A + M + P + +Y +LI+G+
Sbjct: 68 EKMVKQ-RINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 124
>gi|9755888|emb|CAC01941.1| RSP67.2 [Raphanus sativus]
Length = 700
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 137/345 (39%), Gaps = 60/345 (17%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
+ + +EK+ + M GV+P+ ++F L GL + VE M FG V
Sbjct: 187 KDLEKSEKLFDEMLQRGVKPDNATFTTLISCARQCGLPNRAVEWFEKMPSFGLEPDNVTL 246
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLII 354
+++I Y + GN+E A L E+ T+ +++ + GN G
Sbjct: 247 AAMIDAYGRAGNVEMA----LSLYDRARTEKWRIDPVTFSTLIRIYGYAGNYDG------ 296
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
C+N I +EM + G L +Y L +
Sbjct: 297 -----------------------CLN---------IYEEMKSLGVKPNLVIYNRLLDSMG 324
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
K R +AT + D+ S+G + + Y ALI A ++ + A ++R M+ KG
Sbjct: 325 KAKRPWQATMIHKDLISNGFEPNWSTYAALIRAYGRARYGEDALVIYRQMKG------KG 378
Query: 475 SYLTIMTGLMENHRPELMA--AFLDEVVE-------DPRVEVKTHDWNSIIHAFCKAGRL 525
LT+ L+ N + A ++DE E E + ++S+I + GR+
Sbjct: 379 MELTV---LLYNTLLSMCADIGYVDEAFEIFQDMKSSGTCEPDSWTFSSLITVYSCCGRV 435
Query: 526 EDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+A+ LR M FEP SLI Y A+Q V+ + ++
Sbjct: 436 SEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQVDDVVRTFEQV 480
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 145/346 (41%), Gaps = 9/346 (2%)
Query: 209 LDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL 268
LD + PN+ ++G C Q V AE V + M GVRPN ++ L + Y
Sbjct: 228 LDMTDQGIPPNVVTYTIVIDGLCKA-QVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLS 286
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
G +++V + M+ G Y L+ K G A + + G + D
Sbjct: 287 IGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKG--IKPDV 344
Query: 329 SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAH 388
S Y ++ G+ G + + + + + +GI + + + A + +A
Sbjct: 345 S--IYGIILHGYATKGALSEMHSFL---DLMVGNGISPNHYIFNIVFCAFAKKAMIGEAM 399
Query: 389 SILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEAS 448
I ++M G S + Y + A CK R +A + + G+ ++ + +L+
Sbjct: 400 DIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGL 459
Query: 449 ITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVK 508
T ++ A LF +M I+ + TIM L R + A L +++E
Sbjct: 460 CTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRV-MKAQRLIDLMERVGTRPD 518
Query: 509 THDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+N++I C G+ ++A + L M+ + +PN+ TY +L++GY
Sbjct: 519 IISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGY 564
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 170/400 (42%), Gaps = 49/400 (12%)
Query: 182 GFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQ-SVSDA 240
G L+D K K+F+ R + KP++ L G Y + ++S+
Sbjct: 313 GLLLDYLCKKGKCTEARKLFDSMIRKGI-------KPDVSIYGIILHG--YATKGALSEM 363
Query: 241 EKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISG 300
++ M G+ PN F + +A K + + +++ + M + G S +V Y++LI
Sbjct: 364 HSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDA 423
Query: 301 YVKLGNLESA------------SRTIL----LCLGGGNMEQSDFSKETYCEVVKGFLQNG 344
KLG ++ A + I+ L G +++ + + E + E+V +
Sbjct: 424 LCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPN 483
Query: 345 NV---KGLANL-----IIEAQKL----EPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
V + NL +++AQ+L E G D +I +G +D+A +LD
Sbjct: 484 VVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLD 543
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M + G Y L YC++ R +A + ++ S+G+ V Y+ ++ ++
Sbjct: 544 IMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTR 603
Query: 453 DFQSAFSLFRDM----REARIYDLKGSYLTIMTGLMENH-RPELMAAFLDEVVEDPRVEV 507
F A L+ +M ++ IY +Y I+ GL +N+ E + F +D +V++
Sbjct: 604 RFSEAKELYLNMITSGKQWSIY----TYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDI 659
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
T +N +I A K GR EDA + P+ TY
Sbjct: 660 IT--FNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTY 697
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 127/315 (40%), Gaps = 42/315 (13%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
M+E G + +V Y++L+ G+ E A +L + G + + +Y V+ GF
Sbjct: 157 MSELGCTPNVVSYNTLLKGFCDENRAEEALE-LLHMMADGQVRSCPPNLVSYNTVINGFF 215
Query: 342 QNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
G V NL ++ Q + P+ VV ++ +I + D+A + +M G
Sbjct: 216 TEGQVDKAYNLFLDMTDQGIPPN--VVTYTI---VIDGLCKAQVVDRAEGVFQQMIDKGV 270
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
+ Y + Y + E +++ ++S+ GL+ D Y L++ A
Sbjct: 271 RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARK 330
Query: 460 LFRDMREARI-------------YDLKG------SYLTIMTG--LMENHR--PELMAAFL 496
LF M I Y KG S+L +M G + NH + AF
Sbjct: 331 LFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFA 390
Query: 497 DEVVEDPRVEV-----------KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQ 545
+ + +++ ++ ++I A CK GR++DA+ +MI PN
Sbjct: 391 KKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIV 450
Query: 546 TYLSLINGYVTAEQY 560
+ SL+ G T +++
Sbjct: 451 VFTSLVYGLCTIDKW 465
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 16/215 (7%)
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQ---LDVGNYDALIE 446
+L M+ GC+ + Y LK +C E+R EA +L+ ++ ++ ++ +Y+ +I
Sbjct: 153 LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN 212
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
T A++LF DM + I +Y ++ GL + + +++ D V
Sbjct: 213 GFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMI-DKGVR 271
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+ +IH + G+ ++ R L+ M EP+ TY L++ Y
Sbjct: 272 PNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLD-------YLCKKGK 324
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
E ++ + +KGIK D +Y ++ G+
Sbjct: 325 CTEARKLFDSMIRKGIK-----PDVSIYGIILHGY 354
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 19/193 (9%)
Query: 410 LKAYCKEHRTAEATQLVMD-ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
LK C R EA +++ +S G +V +Y+ L++ + A L M + +
Sbjct: 137 LKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQ 196
Query: 469 IYDLKG---SYLTIMTGLM-ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
+ SY T++ G E + FLD + D + + +I CKA
Sbjct: 197 VRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLD--MTDQGIPPNVVTYTIVIDGLCKAQV 254
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF 584
++ A+ ++MI PN TY LI+GY++ Q W E+ R + G++
Sbjct: 255 VDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQ-------WKEVVRMLKEMSAHGLE- 306
Query: 585 EHNLVDAFLYALV 597
D F Y L+
Sbjct: 307 ----PDCFTYGLL 315
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 92/462 (19%), Positives = 171/462 (37%), Gaps = 51/462 (11%)
Query: 57 QQQQQTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSL 116
QQ + NI + +H L E + K ++A+ L P L+ +L
Sbjct: 263 QQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKK 322
Query: 117 QDNHNLKRAFASVV------------YVIEKNPKLLDFQTVHTLLGSMRNANTAAP---A 161
++ F S++ ++ +H+ L M N +P
Sbjct: 323 GKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMV-GNGISPNHYI 381
Query: 162 FALVKCMFKNRYFMPFELWGGFLVDICRK------NSNFVAFLKVFEECCRIAL--DENL 213
F +V C F + + G +DI K + N V + + + C++ D L
Sbjct: 382 FNIVFCAFAKKAMI------GEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435
Query: 214 DF-------MKPNIYACNAALEGCCYGLQSVSDAEKVIE---TMSVLGVRPNESSFGFLA 263
F + PNI + + YGL ++ EK E M G+ PN F +
Sbjct: 436 KFNQMINEGVAPNIVVFTSLV----YGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIM 491
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNM 323
+G K L LM G ++ Y++LI G+ +G + AS+ + + L G
Sbjct: 492 CNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLK 551
Query: 324 EQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
++ TY ++ G+ ++G + ++ E + +VV + I+
Sbjct: 552 P----NECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNT---ILHGLFKTRR 604
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
+A + M G + Y L K + EA ++ + S LQ+D+ ++
Sbjct: 605 FSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNI 664
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
+I A + + A +LF + + +Y I L+E
Sbjct: 665 MIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIE 706
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 7/304 (2%)
Query: 250 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLES 309
+G+RPN +F + +G ++ E+ M G+ + +++LI G K G E
Sbjct: 266 MGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEK 325
Query: 310 ASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRS 369
A R L + N + + TY ++ G+ ++ + L+ +++ G+ + +
Sbjct: 326 AFRLFLKLVRSENHKPNVL---TYTAMISGYCRDEKMNRAEMLL---SRMKEQGLAPNTN 379
Query: 370 VGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
+I G ++A+ +++ MN G S + Y + CK+ R EA +++
Sbjct: 380 TYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSG 439
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+GL D Y LI + + A LF M ++ I SY T++ R
Sbjct: 440 FRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRM 499
Query: 490 ELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLS 549
+ F +E V V + S+I +C+ G L A + RM + TY +
Sbjct: 500 KESEMFFEEAVRFGLVPTNK-TYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGA 558
Query: 550 LING 553
LI+G
Sbjct: 559 LISG 562
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 99/250 (39%), Gaps = 8/250 (3%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN+ A + G C + ++ AE ++ M G+ PN +++ L + G E+
Sbjct: 340 KPNVLTYTAMISGYCRD-EKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAY 398
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
EL ++MNE GFS + Y++++ G K G ++ A + L G D K TY +
Sbjct: 399 ELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKV----LKSGFRNGLDADKVTYTIL 454
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ + +K ++ K+ SGI D +I+ ++ +E
Sbjct: 455 ISEHCKQAEIK---QALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVR 511
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G Y + YC+E A + +S G D Y ALI
Sbjct: 512 FGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDE 571
Query: 457 AFSLFRDMRE 466
A L+ M E
Sbjct: 572 ARCLYDAMIE 581
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/402 (19%), Positives = 146/402 (36%), Gaps = 73/402 (18%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
V +A +++ M G+ P+ + ++ + GL E L M G V Y
Sbjct: 148 VKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRV 207
Query: 297 LISGYVKLGNLESASRTILLCLGGGNMEQS-DFSKETYCEVVKGFLQNGNVK-------- 347
++ GY KLGN+ + R + GG +E+ T +V+ F + G V
Sbjct: 208 MVVGYCKLGNVLESDRWL-----GGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRR 262
Query: 348 --------GLANLIIEAQKLEPSGIV------VDRSVGFG----------IISACVNLGL 383
L N + L G V ++ VG G +I G
Sbjct: 263 FCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGW 322
Query: 384 SDKAHSI-LDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
++KA + L + + + Y + YC++ + A L+ + GL + Y
Sbjct: 323 TEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYT 382
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE-----LMAAFLD 497
LI+ + +F+ A+ L M E +Y I+ GL + R + L + F +
Sbjct: 383 TLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRN 442
Query: 498 EVVED------------PRVEVK-----------------THDWNSIIHAFCKAGRLEDA 528
+ D + E+K H + ++I FC+ R++++
Sbjct: 443 GLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKES 502
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+ + P ++TY S+I GY L +H +
Sbjct: 503 EMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRM 544
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 166/420 (39%), Gaps = 56/420 (13%)
Query: 154 NANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENL 213
A A A LV+ Y ++ G + +CR + A+ KV E+ ++E++
Sbjct: 66 GAGMANQALELVR-ELSGVYTPTLFIYNGIITGLCRASRVMDAY-KVLEK----MVEESI 119
Query: 214 DFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQE 273
PN++ L G C A +V + M G +PN ++G L + G +
Sbjct: 120 ---VPNVFTYTILLNGLCRS-NKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEID 175
Query: 274 KIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKE 331
+ + + + ++ ++++ G K L+ A + + M Q ++
Sbjct: 176 EALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFM------EEMRQMGVRPNEV 229
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
TY +V GF Q+G + + E +K G ++ + G + A G D+A +
Sbjct: 230 TYSNLVHGFRQHGELDRVIRFF-EEEKARKGG-SLEAAAYPGYLDALCKAGYLDRARKSV 287
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+E+ G + Y + + + + + +L+ D+ +G++ DV Y LI
Sbjct: 288 EELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKE 347
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+ FQ AF L M A GS ++T
Sbjct: 348 RKFQDAFRLLELMEAA------GSPPNVVT------------------------------ 371
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+NS++ CK+G++++ R M+ + P+ TY ++NG A S + ++ IK
Sbjct: 372 YNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIK 431
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 118/275 (42%), Gaps = 26/275 (9%)
Query: 359 LEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY----- 413
L G+V + ++ G++++A ++ E++ GVY PTL Y
Sbjct: 45 LASRGVVYGETTYKLVVDGLCGAGMANQALELVRELS--------GVYTPTLFIYNGIIT 96
Query: 414 --CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYD 471
C+ R +A +++ + + +V Y L+ S + A +F++M+
Sbjct: 97 GLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRN---G 153
Query: 472 LKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAK 529
K + +T T + R + L ++E +E+ T +I+ CKA RL+DA
Sbjct: 154 CKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDAL 213
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
+ + M + PN+ TY +L++G+ + V+ + E K +KG E
Sbjct: 214 KFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEK------ARKGGSLEAAAY 267
Query: 590 DAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+L AL K G+ D + VE+ ++ V D Y
Sbjct: 268 PGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTY 302
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 107/241 (44%), Gaps = 10/241 (4%)
Query: 340 FLQNGNVKGL--ANLIIEAQKLEPSGIVVDRSVGFGIISACVNL-GL--SDK---AHSIL 391
F+ NG + GL A+ +++A K+ +V+ S+ + + + L GL S+K A +
Sbjct: 89 FIYNGIITGLCRASRVMDAYKVLEK--MVEESIVPNVFTYTILLNGLCRSNKTKLAREVF 146
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
EM GC Y ++ + EA +++++ S L DV ++ +
Sbjct: 147 QEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKA 206
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
A +MR+ + + +Y ++ G ++ + + F +E ++
Sbjct: 207 SRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAA 266
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+ + A CKAG L+ A++++ + P+ TY LIN + A Q+ + L + +++
Sbjct: 267 YPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMR 326
Query: 572 R 572
R
Sbjct: 327 R 327
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 141/356 (39%), Gaps = 23/356 (6%)
Query: 81 TNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKL- 139
+N T A + F+ + N P+ +LI HLS + R V + +++ +L
Sbjct: 136 SNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALR-----VMIEQRSLELP 190
Query: 140 LDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLK 199
D T T++G + A+ A ++ M + P E+ LV R++ ++
Sbjct: 191 TDVITCTTIVGGLCKASRLDDALKFMEEM-RQMGVRPNEVTYSNLVHGFRQHGELDRVIR 249
Query: 200 VFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF 259
FEE ++ A L+ C + A K +E + GV P+ ++
Sbjct: 250 FFEE------EKARKGGSLEAAAYPGYLDALCKA-GYLDRARKSVEELRQSGVVPDVVTY 302
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
L +A G + +EL M G +V YS+LI+ K + A R + L
Sbjct: 303 SMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEA 362
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
G S + TY V+ G ++G + + + K S VV S+ I++
Sbjct: 363 AG----SPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSI---IMNGLS 415
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV--MDISSSG 433
G+ D A + + + + Y + + C+ + EA + M+++ +G
Sbjct: 416 KAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAG 471
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 155/358 (43%), Gaps = 26/358 (7%)
Query: 193 NFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
N++ L EE R +++ + P+ +E C + + DA +E M+ G+
Sbjct: 88 NWLCKLNRVEEA-RELIEKMARYAPPDALTYGPIVERLC-KTKRIDDALATVEEMATRGI 145
Query: 253 RPNESSFGFLAYLYALKGL-QEKIVELESLMNEF----GFSSQMVFYSSLISGYVKLGNL 307
+P+ + F+ L GL QE+ VE L+ E + +V Y++LI+G K +
Sbjct: 146 KPDAFIYNFV-----LSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRI 200
Query: 308 ESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
E+A G G + ++ +Y ++ GF + ++ ++ K+ S V +
Sbjct: 201 ETAYELFKEMAGKGYVP----TEVSYNTLIDGFCKKKDLVAAKDVF---DKMVRSNCVPN 253
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+I G A +LD M G + + Y + +CK R EA +L+
Sbjct: 254 VVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLE 313
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
+ + G+ V Y+ L+ + + + AF LFR M + R + +Y T++ L H
Sbjct: 314 QMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALC--H 371
Query: 488 RPELMAA---FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEP 542
+L A + + + + + T+D ++ +AG++ +A+ + +M + P
Sbjct: 372 HKQLDGAHRLYAEMIAKGCPPDAITYD--TLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 135/313 (43%), Gaps = 19/313 (6%)
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
M++ V P ++F +A +A G E++ E+ M E G++ + Y LIS K+GN
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 307 LESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGI 364
+ A + + M F ++ Y ++ + V+ LI + + P
Sbjct: 61 FDEAYKLL------HTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPD- 113
Query: 365 VVDRSVGFG-IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
++ +G I+ D A + ++EM G +Y L C+E + EA
Sbjct: 114 ----ALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEAR 169
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
L + + +V Y+ LI + ++A+ LF++M + SY T++ G
Sbjct: 170 LLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 229
Query: 484 MENHRPELMAA--FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
+ + +L+AA D++V V + ++I K+G+++ A L M+
Sbjct: 230 CK--KKDLVAAKDVFDKMVRSNCVP-NVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVT 286
Query: 542 PNDQTYLSLINGY 554
PN TY LI+G+
Sbjct: 287 PNVATYSCLIDGF 299
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 73/177 (41%), Gaps = 3/177 (1%)
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
G + + K R + ++ + +G L Y LI +F A+ L
Sbjct: 9 GAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLL 68
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
MR R +Y TI+ L + +R E ++++ + T + I+ CK
Sbjct: 69 HTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALT--YGPIVERLCK 126
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHE-IKRKISTD 577
R++DA T+ M +P+ Y +++G E+ +++ + +K++I+ +
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPN 183
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 129/296 (43%), Gaps = 13/296 (4%)
Query: 264 YLYALKGL--QEKIVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
Y + GL E+ +E + N+ G++ V Y+++I G ++G+ A + +
Sbjct: 301 YQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMM 360
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
G M+ + + TY ++ G L++G+ + L E + G IIS
Sbjct: 361 DKG-MQPNAY---TYNTMLHGSLKSGDFERACELYNE---MCNKGYGTTTVTCNKIISEL 413
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
+ G SD+A + +M+ G Y ++ +CKE + E L+ ++ + Q V
Sbjct: 414 CSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSV 473
Query: 439 GNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDE 498
Y+ LI S DF++A L DM ++ +Y T++ G +++ E + +E
Sbjct: 474 SLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNE 533
Query: 499 VVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+ T N II C G+ ++A ++M + + TY SLI G+
Sbjct: 534 TC-NKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGF 588
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 165/433 (38%), Gaps = 32/433 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV-LGVRPNESSFGFLAYLYALKGLQEK 274
++ +I ACN+ L GC ++ E E + N + G L + G +
Sbjct: 187 IRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSG---Q 243
Query: 275 IVELESLMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE 331
+ L+N+F G Y+ LI+G+ + N S S + + ++ +
Sbjct: 244 VARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLP----TIY 299
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQK----LEPSGIVVDRSVGFGIISACVNLGLSDKA 387
TY E++ G +N +EA + L+ G DR + +I +G +A
Sbjct: 300 TYQEIINGLCKNEEC-------LEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEA 352
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ EM G Y L K A +L ++ + G + +I
Sbjct: 353 RKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISE 412
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV-EDPRVE 506
+ AF +F+ M E I +Y +++ G + + + L+E+V +DP+
Sbjct: 413 LCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPS 472
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
V ++ +I CK G E AKR L M PN TY ++++G + + + V +
Sbjct: 473 VSLYEL--LIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVREL 530
Query: 567 WHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQ 626
++E KG + + L G D ++ +K E + D Y
Sbjct: 531 YNET-------CNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNS 583
Query: 627 AFMENHKKLKVAK 639
K+ KV K
Sbjct: 584 LIRGFCKEGKVGK 596
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 132/341 (38%), Gaps = 54/341 (15%)
Query: 223 CNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLM 282
CN + C +S +A +V + MS G++ + ++ L + +G K+ E +L+
Sbjct: 406 CNKIISELCSRGKS-DEAFEVFKKMSETGIQADAITYNSLIRGFCKEG---KVDERMNLL 461
Query: 283 NEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVV 337
NE + Y LI K G+ E+A R + G+M TY ++
Sbjct: 462 NELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLL------GDMSSKGLHPNAYTYDTML 515
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G L++G+ + + L E G + IIS + G SD+A + +M+
Sbjct: 516 HGSLKSGDFEHVRELYNETCN---KGYGTTTATCNKIISELCSRGKSDEASEMFKKMSET 572
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
G Y ++ +CKE + ++ L+ ++ + GLQ +Y +LI + D +SA
Sbjct: 573 GIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESA 632
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
L+ DM I +P ++ H +I
Sbjct: 633 KRLWGDMVSKGI--------------------------------EPHANLREH----LIS 656
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
CK GR + L M+ + +P + L + +E
Sbjct: 657 GLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECLIQSE 697
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 106/272 (38%), Gaps = 16/272 (5%)
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT--LKAYCK 415
+L+ +GI + I+S C+ G ++ EM G + ++A+C
Sbjct: 181 QLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCD 240
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
+ A +L+ +GL Y+ LI ++++ S + M +
Sbjct: 241 SGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYT 300
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD---WNSIIHAFCKAGRLEDAKRTL 532
Y I+ GL +N E + A+ V D + D + ++IH C+ G +A++
Sbjct: 301 YQEIINGLCKNE--ECLEAY--RVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLW 356
Query: 533 RRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAF 592
M+ +PN TY ++++G + + + +++E+ KG +
Sbjct: 357 FEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEM-------CNKGYGTTTVTCNKI 409
Query: 593 LYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ L G D +V +K E + D Y
Sbjct: 410 ISELCSRGKSDEAFEVFKKMSETGIQADAITY 441
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+ A ++V DI+ G D + + ++ + A ++ ++EA I +
Sbjct: 138 KAVRAAKMVRDIA--GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACN 195
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRV-EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMI 536
+I++G ++ + EL+ F E+++ + T +I AFC +G++ L + +
Sbjct: 196 SILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFL 255
Query: 537 FLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
+P + TY LI G+ A+ Y S+ + H +
Sbjct: 256 KTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTM 289
>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1385
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 109/247 (44%), Gaps = 8/247 (3%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+++A G A +L +M+ G Y L YCK+ R A++L+ ++S G
Sbjct: 185 LLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKG 244
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
+ DV Y+ LI+ + + R MR+ +Y + +Y T++ GL++ + +
Sbjct: 245 IAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVAT 304
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+E + + + +N++I C G +E+A R M+ PN+ TY +L+NG
Sbjct: 305 KVFEE-MSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNG 363
Query: 554 YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
Q+ V + ++ G++ H + L K G + +Q+++
Sbjct: 364 ISKHAQFGLVSSVLERMR-------MDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDML 416
Query: 614 EMKVFVD 620
++ V D
Sbjct: 417 KVSVSPD 423
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 7/208 (3%)
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
+L +N G + + Y+SL +G+V+ + + A + L G + + +
Sbjct: 815 DLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTC----KQFTTL 870
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
++G + GNVKG L E + L S V S II +D+A IL M
Sbjct: 871 IRGMCRMGNVKGAMELQDEMKILGVSSQGVAMS---AIIRGLARSRKTDEATRILGIMLE 927
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
+ + + YCKE A+A +L + ++LDV Y+ LI D Q+
Sbjct: 928 MQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQA 987
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLM 484
AF L+ +M + I+ Y+ ++ +
Sbjct: 988 AFKLYEEMEQRDIWPNTSIYIVLIDSFL 1015
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 167/428 (39%), Gaps = 30/428 (7%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T +L+ + PA L + P LVD K + A L +
Sbjct: 617 DSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYM 676
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQS-VSDAEKVIETMSVLGVRPNESSF 259
FE+ L+E + +P+ A N L+ Y + +S ++ TM + N +++
Sbjct: 677 FED----MLNEGV---QPDAIAFNVLLDR--YSRKGKMSKVNDILSTMRSRSLCFNLATY 727
Query: 260 GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLG 319
L + Y+ + + +L + M GF+ + + SLI GY K G+L+ A + L
Sbjct: 728 NILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKF----LR 783
Query: 320 GGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
+E T +V + +K +L+ ++L G+ + + + V
Sbjct: 784 KITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLV---KQLNMLGVTPNVDTYNSLFNGFV 840
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQL-----VMDISSSGL 434
D+A IL + G + + ++ C+ A +L ++ +SS G+
Sbjct: 841 RTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGV 900
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIM-TGLMENHRPELMA 493
+ A+I S+ A + M E +I ++ T+M T E + + A
Sbjct: 901 AM-----SAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAK--A 953
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
L V+E V++ +N +I C G ++ A + M PN Y+ LI+
Sbjct: 954 LELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDS 1013
Query: 554 YVTAEQYF 561
++ Y
Sbjct: 1014 FLCTGNYI 1021
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 100/489 (20%), Positives = 175/489 (35%), Gaps = 115/489 (23%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T + L+ + + +A + +++ M KN + P E+ L++ K KV
Sbjct: 248 DVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVY-PNEITYNTLINGLVKEGKIGVATKV 306
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
FEE +L + PN N + G C ++ +A ++ + M G+RPNE ++G
Sbjct: 307 FEEM-------SLCNLLPNSVTYNTLIFGHCSN-GNIEEALRLCDVMVSHGLRPNEVTYG 358
Query: 261 FL------------------------------AYLYAL-----KGLQEKIVELESLMNEF 285
L +Y + GL E+ V+L M +
Sbjct: 359 ALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKV 418
Query: 286 GFSSQMVFYSSLISG-------------------YVKLGNLESASRTILLCLGGGNMEQS 326
S +V +S L++G Y K+GNL+ A + M QS
Sbjct: 419 SVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAV------MNQS 472
Query: 327 DFSKETYCE--VVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFGIISACVNLG 382
+ + +V F + G ++ + + L PS + D II N G
Sbjct: 473 GHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFD-----CIIDTYGNSG 527
Query: 383 LSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYD 442
+ KA S+ D+MN+ G Y LK EA + SS + Y+
Sbjct: 528 DALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYN 587
Query: 443 ALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED 502
++ + S + +A +L +M +M N P+
Sbjct: 588 TMLTLTSRSGNLSNAVALLDEM------------------VMNNFVPD------------ 617
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ-FEPNDQTYLSLINGYVTAEQYF 561
+ + S+I C+ G++ A R I PN Y SL++G +
Sbjct: 618 ------SFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSK 671
Query: 562 SVLMMWHEI 570
+ L M+ ++
Sbjct: 672 AALYMFEDM 680
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 123/274 (44%), Gaps = 12/274 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIE---TMSVLGVRPNESSFGFLAYLYALKGLQ 272
++ + CN A G + +V+E TM V P+ ++ + + +
Sbjct: 290 LEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMT 349
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET 332
+ E+ + + + G++ MV Y++LI G+ K+G LE AS+ + G + ++ +
Sbjct: 350 LQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLP----NEYS 405
Query: 333 YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV-VDRSVGFGIISACVNLGLSDKAHSIL 391
Y ++ GF + GN+ L +K+ SG S I+ C++ G +D+A+
Sbjct: 406 YNTLIYGFCKIGNLDEAMKLY---KKMLDSGYKETTLSCNTLILGLCLH-GRTDEAYDFF 461
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
EM + Y ++ +C+E + ++T L+ ++ + GLQ +Y LI+
Sbjct: 462 REMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQL 521
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLME 485
Q A ++ DM + + + I++GL E
Sbjct: 522 GSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCE 555
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 377 ACVNLGLSDKAHSILDEMNACGC--SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
+C+ G +D + + M G V + ++A+C +++ + A +++ GL
Sbjct: 235 SCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGL 294
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDM----REARIYDLKGSYLTIMTGLMENHRPE 490
++ LI ++ L M R I+ +Y I+ G +N
Sbjct: 295 TPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIF----TYQEIINGFCKNWMT- 349
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
L A + ++D + ++IH FCK G+LEDA + MI F PN+ +Y +L
Sbjct: 350 LQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTL 409
Query: 551 INGY 554
I G+
Sbjct: 410 IYGF 413
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 189/476 (39%), Gaps = 79/476 (16%)
Query: 201 FEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFG 260
++ CR+ + + +P ++ L+G C ++ V +AE ++ M GV PN ++
Sbjct: 177 IDDACRVFAKMSRGWCRPGVHTYTVLLDGLCK-VRRVGEAEALLGEMVNKGVVPNVVTYN 235
Query: 261 FL------------------------------AYLYALKGL--QEKIVELESLMNEF--- 285
L Y + GL K+ +++E
Sbjct: 236 ALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGK 295
Query: 286 GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK--ETYCEVVKGFLQN 343
G + +++ Y++LI+GY K G++++A + L M+++ + +T+ EV+ GF
Sbjct: 296 GVALEVLTYNALINGYCKGGDMKAALDVLQL------MKRNRVNPGVQTFNEVIHGFCCG 349
Query: 344 GNV-KGLANLI-IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
G V K +A L + L P+ + + +IS ++G A +LD M G
Sbjct: 350 GKVHKAMAFLTQMAGAGLSPNTVTFN-----SLISGQCSVGERKIALRLLDLMEEYGVLP 404
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
Y + A C E + EA L + G++ Y +L+ D SAF L
Sbjct: 405 DRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLM 464
Query: 462 RDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCK 521
M +Y T++ GL + R + LD+ ++ +E T +N +I
Sbjct: 465 EKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDK-MKKQGIEPTTCTFNILIKQMLW 523
Query: 522 AGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKG 581
+ DA + +MI +P+ QTY KISTD +G
Sbjct: 524 DKKHADAAKMYEQMISSGCKPDKQTY-----------------------TLKISTDWFEG 560
Query: 582 IKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKV 637
E N +D + + + G F V + +K +VD ++AF + K L V
Sbjct: 561 ATKEEN-IDMAVVEMHEAGVFP---DVETYNAIIKAYVDAGLKEKAFFAHVKMLSV 612
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 3/226 (1%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
TY ++ G + G + L ++ + G DR +I G D A +
Sbjct: 127 TYNCLMLGLCRAGLLAAACGLFVQMPR--RWGACYDRYSYTILIKGLCAAGRIDDACRVF 184
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+M+ C G+ Y L CK R EA L+ ++ + G+ +V Y+ALI
Sbjct: 185 AKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQE 244
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
F L M R +Y ++ GL ++ + A L E + V ++
Sbjct: 245 GRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAI-GKGVALEVLT 303
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTA 557
+N++I+ +CK G ++ A L+ M + P QT+ +I+G+
Sbjct: 304 YNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCG 349
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 134/336 (39%), Gaps = 21/336 (6%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN 283
NA + G C G + A V++ M V P +F + + + G K + + M
Sbjct: 305 NALINGYCKG-GDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMA 363
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF--SKETYCEVVKGFL 341
G S V ++SLISG +G + A R + L ME+ ++TY +
Sbjct: 364 GAGLSPNTVTFNSLISGQCSVGERKIALRLLDL------MEEYGVLPDRQTYAIFIDALC 417
Query: 342 QNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSV 401
G ++ +L L GI + ++ +G D A ++++M + C
Sbjct: 418 DEGQLEEAHSLF---SCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMP 474
Query: 402 GLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF 461
+ Y + CK R A L+ + G++ ++ LI+ + + A ++
Sbjct: 475 DVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMY 534
Query: 462 RDMREARIYDLKGSY-LTIMT----GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
M + K +Y L I T G + ++ + E P VE +N+II
Sbjct: 535 EQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVET----YNAII 590
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
A+ AG E A +M+ + +P+ TY L+N
Sbjct: 591 KAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLN 626
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 150/347 (43%), Gaps = 23/347 (6%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+I+ + G C +S DA +V E + G RP+ ++ L +G ++ ++
Sbjct: 148 PDIFTYTTLITGFCKSKKS-DDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAID 206
Query: 278 LESLMNEFGFS-SQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
L M + G V Y+SLISG+ ++G ++ A + M ++ S + TY
Sbjct: 207 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL------ERMAETGSSPDVVTYT 260
Query: 335 EVVKGFLQNGNVKGLANLI--IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
++ GF + + +L+ + + L P +V S+ G+ C LSD H IL
Sbjct: 261 TLMNGFCKLARLDDAYDLLNQMTRKGLTPD-VVTFTSLMDGL---CRENRLSDAVH-ILG 315
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
EM CS + Y L YC+ ++ EA + +++ +V +++ +I
Sbjct: 316 EMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVN 373
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDW 512
A L + R R Y T++ GL + + +++E+P + +
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQ 559
+++I C AG L+ A+ + + PN TY LI+ + A +
Sbjct: 434 STLITGLCNAGMLDRARGYIEKGCV----PNIGTYNLLIDAFRKANR 476
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 140/333 (42%), Gaps = 25/333 (7%)
Query: 252 VRPNESSFGFLAYLYALKGLQEKIVELESL------MNEFGFSSQMVFYSSLISGYVKLG 305
V N S F+ Y ++GL K+ LE M GF + Y+++I
Sbjct: 2 VATNSCSADFVTYTSLIQGLC-KVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV-KGLANLIIEAQKLEPSGI 364
L A R L + N+ + TY ++ G + G V + +A L +K P+ +
Sbjct: 61 RLHEA-RKFLEEMANRNLTPNVV---TYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV 116
Query: 365 VVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQ 424
+ +IS + +A+ +L+EM GC + Y + +CK ++ +A +
Sbjct: 117 TYN-----SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 171
Query: 425 LVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLF-RDMREARIYDLKGSYLTIMTGL 483
+ + + G + DV Y LI+ + A LF R ++ +Y ++++G
Sbjct: 172 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 231
Query: 484 MENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
+ + L+ + E P V + ++++ FCK RL+DA L +M
Sbjct: 232 CRMGKMDEAMNLLERMAETGSSPDVVT----YTTLMNGFCKLARLDDAYDLLNQMTRKGL 287
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
P+ T+ SL++G + + + E++RK
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 143/346 (41%), Gaps = 27/346 (7%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGL--QE 273
+ PN+ ++G C G +V E +++L + + Y + GL E
Sbjct: 77 LTPNVVTYTVLIDGLCKG-------GRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAE 129
Query: 274 KIVELESLMNEFGFSS---QMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSK 330
+ E L+ E +S + Y++LI+G+ K + A R + G F
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG------FRP 183
Query: 331 E--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGF-GIISACVNLGLSDKA 387
+ TY ++ G + G +K +L ++ SG + +V + +IS +G D+A
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLF---GRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
++L+ M G S + Y + +CK R +A L+ ++ GL DV + +L++
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEV 507
A + +MR +Y TI+ G ++ E F+ E ++ P V
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVV 360
Query: 508 KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N +I CK R +A + + P+ Y ++I+G
Sbjct: 361 S---FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDG 403
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 106/279 (37%), Gaps = 45/279 (16%)
Query: 193 NFVAFLKVFEECCRIA-LDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKV 243
N V + + CR+ +DE ++ ++ P++ + G C L + DA +
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFC-KLARLDDAYDL 278
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
+ M+ G+ P+ +F L + V + M S + Y++++ GY +
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338
Query: 304 LGNLESASRTIL------------------LCLGGGNMEQSDFSKET-----------YC 334
LE A + +L LC + E + +E Y
Sbjct: 339 ANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYT 398
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
V+ G + V + + LE G + + +I+ N G+ D+A +++
Sbjct: 399 TVIDGLCREKKVDEACR--VYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEK- 455
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
GC +G Y + A+ K +R +A +L+ D+ G
Sbjct: 456 ---GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 157/380 (41%), Gaps = 26/380 (6%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
KVF++ R + M ++Y NA L C + AE ++ M GV + S
Sbjct: 258 KVFDQMTRAGV-----AMNTHVY--NAMLH-VCLKAGDAALAESLMTRMDAAGVPLDRFS 309
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
F + LY KG+Q + + + M G + +V ++SLI G K ++ AS+ +
Sbjct: 310 FNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLR--- 366
Query: 319 GGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIIS 376
M + + + TY +V G+ + G+++ L E +E G++ + I+
Sbjct: 367 ---EMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGE---MEAMGMLPGVATYNAILR 420
Query: 377 ACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQL 436
G + + +L+EM+ + AYCK A ++ + SGLQL
Sbjct: 421 KLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQL 480
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
D Y AL+ +++ A +M A I+ GL + + A
Sbjct: 481 DQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIP 540
Query: 497 DEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
DE+++ P V + S+I CK G ++ A M E + Y +L
Sbjct: 541 DELMKRGFPPDKAV----YRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACA 596
Query: 554 YVTAEQYFSVLMMWHEIKRK 573
Y+TA + + L + +E+ +K
Sbjct: 597 YLTAGKPVAALDILNEMAKK 616
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 107/244 (43%), Gaps = 29/244 (11%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
L A K TA A ++ ++ +G+ ++ Y+A++ + + D A SL M A +
Sbjct: 244 LTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGDAALAESLMTRMDAAGV 303
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
+ S+ T++ L + A + E +E+ V+ WNS+IH CK R+++A
Sbjct: 304 PLDRFSFNTVI-ALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEAS 362
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM---------------WHEIKRKI 574
+ LR M P+ TY +L++GY A + + ++ I RK+
Sbjct: 363 QLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKL 422
Query: 575 STDG-------------QKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDK 621
DG ++ ++ +H + + A K G + ++V + E + +D+
Sbjct: 423 CEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQ 482
Query: 622 WKYK 625
+ YK
Sbjct: 483 FTYK 486
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 116/290 (40%), Gaps = 41/290 (14%)
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+++ +G+ +DR +I+ G+ +A + + M G + + + CKE
Sbjct: 297 RMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKER 356
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
R EA+QL+ +++ +G+ D Y L++ + D + A L +M + +Y
Sbjct: 357 RVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYN 416
Query: 478 TIMTGLMENHRPELMAAFLDEVVE----------------------------------DP 503
I+ L E+ + + + L+E+ E +
Sbjct: 417 AILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMES 476
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+++ + +++H FCKA L++AK L M+ F PN +++G +V
Sbjct: 477 GLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAV 536
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQ 613
L + E+ + +G + + + + L K GF D V + Q
Sbjct: 537 LAIPDELMK-------RGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQ 579
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 79/422 (18%), Positives = 160/422 (37%), Gaps = 59/422 (13%)
Query: 86 EAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQTV 145
+A + F + A + P +++L+ L+ + ++ F + + ++
Sbjct: 220 DALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMT----RAGVAMNTHVY 275
Query: 146 HTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWG--GFLVDICRKNSNFVAFLKVFEE 203
+ +L A AA A +L+ M + +P + + + CRK + A
Sbjct: 276 NAMLHVCLKAGDAALAESLMTRM--DAAGVPLDRFSFNTVIALYCRKGMQYEAM------ 327
Query: 204 CCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLA 263
C R ++ +K ++ N+ + G C + V +A +++ M++ GV P+ ++ L
Sbjct: 328 CVRERMENQ--GVKADVVTWNSLIHGLCKE-RRVKEASQLLREMAMAGVAPDHVTYTTLV 384
Query: 264 YLYALKGLQEKIVELESLMNEFGFSSQMVFYS---------------------------- 295
Y G E+ V+L M G + Y+
Sbjct: 385 DGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQ 444
Query: 296 -------SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKG 348
+LI+ Y K G++ SA + + G ++ F TY +V GF + +
Sbjct: 445 ADHVTCNTLINAYCKRGDMTSALKVKRRMMESG-LQLDQF---TYKALVHGFCKAKELDE 500
Query: 349 LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVP 408
+ E + +G + SV I+ N + +I DE+ G VY
Sbjct: 501 AKEALFE---MMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRS 557
Query: 409 TLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
++ CK+ A + ++ GL+ D Y L A +T+ +A + +M + +
Sbjct: 558 LIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQ 617
Query: 469 IY 470
+Y
Sbjct: 618 LY 619
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 12/274 (4%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
+ ++G +V Y++L++GY++LG+L+ R L G Q D TY ++ G
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVY--TYSVLINGLC 223
Query: 342 QNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
+ + L E + L P+G+ + C N G D A I +M +
Sbjct: 224 KESKMDDANELFDEMLVKGLVPNGVTFTTLID----GHCKN-GRVDLAMEIYKQMLSQSL 278
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
S L Y + CK+ +A L+ ++S GL+ D Y LI+ D SAF
Sbjct: 279 SPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFE 338
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAF 519
+ M + I + +Y +++GL + R L E++ ++ + II+ F
Sbjct: 339 HRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLS-VGLKPDARTYTMIINEF 397
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
CK G + + L+ M P+ TY L+NG
Sbjct: 398 CKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 1/162 (0%)
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+E+ CG L + + +CK+ A + I+ GL+ V +Y+ L+ I
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
D F L M + + +Y ++ GL + + + DE++ V
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV-T 249
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ ++I CK GR++ A ++M+ P+ TY +LI G
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 291
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 160/386 (41%), Gaps = 22/386 (5%)
Query: 191 NSNFVAFLKVFEECCRIAL-DENLDFMK--------PNIYACNAALEGCCYGLQSVSDAE 241
+ N + F V + CR+ L D+ ++ + P+ Y + + G C + + +A
Sbjct: 167 HPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKE-ERIDEAV 225
Query: 242 KVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGY 301
+++ M V G PN +F L KG + +L M G V Y++L+ G
Sbjct: 226 SLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGL 285
Query: 302 VKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEP 361
G LE A ++L + +D T+ ++ GF+ G +++ LE
Sbjct: 286 CLKGKLEKAV-SLLNQMVSNKCVPNDV---TFGTLINGFVMQGRASDGTRVLVS---LEA 338
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
G + V +IS G ++A + EM GC VY + C+E + E
Sbjct: 339 RGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDE 398
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
A + ++ + G + Y +L+ + D A ++++M + Y ++
Sbjct: 399 ARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILIN 458
Query: 482 GLMENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ- 539
GL ++ + E + + + +++V ++S+IH FC A +E + +M+
Sbjct: 459 GLCKDGKFMEALMVWKQMLSRGIKLDVVA--YSSMIHGFCNANLVEQGLKLFNQMLCQGP 516
Query: 540 -FEPNDQTYLSLINGYVTAEQYFSVL 564
+P+ TY L+N + + F +
Sbjct: 517 VVQPDVITYNILLNAFCIQKSIFRAI 542
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 1/200 (0%)
Query: 374 IISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+I A LGL DKA + E+ C+ Y + CKE R EA L+ ++ G
Sbjct: 176 VIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEG 235
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
++ ++ LI A D A L +M + +Y ++ GL + E
Sbjct: 236 TFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAV 295
Query: 494 AFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+ L+++V + V + ++I+ F GR D R L + N+ Y SLI+G
Sbjct: 296 SLLNQMVSNKCVPNDV-TFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISG 354
Query: 554 YVTAEQYFSVLMMWHEIKRK 573
++ + +W E+ K
Sbjct: 355 LCKEGKFNQAMELWKEMVGK 374
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 87/220 (39%), Gaps = 34/220 (15%)
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A S+LDEM G L + + A CK+ A +LV ++ G + Y+AL
Sbjct: 222 DEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNAL 281
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLM-----------------ENH 487
+ + A SL M + ++ T++ G + H
Sbjct: 282 VHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGH 341
Query: 488 R------PELMAAFLDEVVEDPRVEV-----------KTHDWNSIIHAFCKAGRLEDAKR 530
R L++ E + +E+ T ++++I C+ G+L++A+
Sbjct: 342 RGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARG 401
Query: 531 TLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEI 570
L M + PN TY SL+ GY A +++W E+
Sbjct: 402 FLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEM 441
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 143/366 (39%), Gaps = 50/366 (13%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFL--------------------- 262
N + G C L + +A ++++ M + G PN ++GFL
Sbjct: 246 NDIVHGLCT-LGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVP 304
Query: 263 ---AYLY-------ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
L+ L G ++ EL M G YS LI G KLG L SA +
Sbjct: 305 ELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMK 364
Query: 313 TILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNG---NVKGLANLIIEAQKLEPSGIVVD 367
+ ME F+ TY ++ F +NG N++ + ++ + G+ ++
Sbjct: 365 LL------REMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSD------KGLSMN 412
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
G+I A D A + EM + G + Y + C ++ EA L
Sbjct: 413 LEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFE 472
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
++ G+ + Y+ LI A + + +Q A SL DM SY ++ L +
Sbjct: 473 NLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDG 532
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+ L E+ E ++ +N +I CK R+ DA + M+ + P+ TY
Sbjct: 533 NVDRSIMLLSEMAEK-GIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTY 591
Query: 548 LSLING 553
+LING
Sbjct: 592 NTLING 597
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 148/342 (43%), Gaps = 17/342 (4%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P+ + + + G C L + A K++ M G P+ ++ L + + G+ + I
Sbjct: 341 PDAHTYSILIHGLC-KLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRA 399
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
+ +M++ G S + Y+ +I K ++ A R + M+ + + TY
Sbjct: 400 MLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFM------QEMKSQGYKPDICTYNT 453
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ N ++ L + L G+V + +I A + G A S+ ++M
Sbjct: 454 IIYHLCNNNQMEEAEYLF---ENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMV 510
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
GCS+ + Y +KA C++ + L+ +++ G++ + +Y+ LI ++ +
Sbjct: 511 LHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVR 570
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD--EVVEDPRVEVKTHDWN 513
A L ++M + +Y T++ GL + M A L+ E + + V +N
Sbjct: 571 DALELSKEMLNQELTPDIVTYNTLINGLC---KMGWMHAALNLLEKLHNEDVHADIITYN 627
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+I CKA L DA L R + PN++T+ ++ +V
Sbjct: 628 ILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFV 669
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 103/256 (40%), Gaps = 19/256 (7%)
Query: 363 GIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEA 422
G V D + +I A G ++A ++LDEM GCS + + + C R EA
Sbjct: 202 GCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREA 261
Query: 423 TQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG 482
+LV + G + Y L++ + + A ++ R+ +L + G
Sbjct: 262 ARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTML-----GRVPELNVVLFNTVIG 316
Query: 483 --LMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQF 540
L++ E AA L E + H ++ +IH CK GRL A + LR M F
Sbjct: 317 RCLLDGKLKE--AAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGF 374
Query: 541 EPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGG 600
P+ TY L++ + MW I+ + KG+ + + A+ K
Sbjct: 375 APSIVTYTILLHSFCRNG-------MWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDR 427
Query: 601 FFDAVMQVVEKSQEMK 616
D M+ + QEMK
Sbjct: 428 RMDDAMRFM---QEMK 440
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 137/346 (39%), Gaps = 48/346 (13%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN + L C +A ++M G++P+ +++G + + YA KG ++
Sbjct: 305 KPNCCTYGSLLNYLCKN-GRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMH 363
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYC 334
+L +LM G S ++ S Y K G ++ A M Q S + +Y
Sbjct: 364 DLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIF------NKMRQQGLSPDAVSYG 417
Query: 335 EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM 394
++ + G V + ++ ++ G+ D V ++ + +K + EM
Sbjct: 418 ALIDALCKLGRVD---DAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEM 474
Query: 395 NACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDF 454
G + + L CKE R E +LV I G++ DV +Y+ LI+ +
Sbjct: 475 LNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTI 534
Query: 455 QSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNS 514
A L M + GL +P+ + +N+
Sbjct: 535 DEASKLLEGM--------------VSVGL----KPD------------------SFSYNT 558
Query: 515 IIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQY 560
++H +CKAGR++ A R+M+ P TY ++++G +++
Sbjct: 559 LLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRF 604
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 103/266 (38%), Gaps = 32/266 (12%)
Query: 390 ILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL---QLDVGNYDALIE 446
+L M GC Y LK C E R EA +L+ ++ + +V +Y +I
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
T ++LF +M + I +Y T++ GL + + A +++ D V+
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI-DNGVK 270
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLI-----NGYVTAEQYF 561
+N +IH + G+ ++ R L M +PN TY SL+ NG ++F
Sbjct: 271 PNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFF 330
Query: 562 SVLMMWHEIKRKISTDG-----------------------QKGIKFEHNLVDAFLYALVK 598
M+ IK ++T G GI H++ + F A K
Sbjct: 331 FDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAK 390
Query: 599 GGFFDAVMQVVEKSQEMKVFVDKWKY 624
G D M + K ++ + D Y
Sbjct: 391 CGIIDKAMDIFNKMRQQGLSPDAVSY 416
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 122/307 (39%), Gaps = 35/307 (11%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTI--------------------LLCLGGG 321
M + G + Y+ LI GY+ +G + R + LC G
Sbjct: 264 MIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGR 323
Query: 322 NMEQSDF-----------SKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSV 370
E F S TY ++ G+ G + + +L+ + +GI + +
Sbjct: 324 CREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLL---NLMVANGISPNHHI 380
Query: 371 GFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDIS 430
SA G+ DKA I ++M G S Y + A CK R +A +
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 440
Query: 431 SSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPE 490
+ G+ D+ + +L+ T ++ LF +M I+ + TI+ L + R
Sbjct: 441 NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRV- 499
Query: 491 LMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSL 550
+ L + +E V +N++I C AG +++A + L M+ + +P+ +Y +L
Sbjct: 500 MEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTL 559
Query: 551 INGYVTA 557
++GY A
Sbjct: 560 LHGYCKA 566
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 106/263 (40%), Gaps = 50/263 (19%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
++F E + + N+ F N CN EG V + +++++++ +GVRP+ S
Sbjct: 469 ELFFEMLNVGIHPNIVFF--NTILCNLCKEG------RVMEGQRLVDSIECMGVRPDVIS 520
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+ L + L G ++ +L M G Y++L+ GY K G ++SA
Sbjct: 521 YNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSA-------- 572
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
S F K L NG + P G+V ++ G+
Sbjct: 573 ------YSHFRK---------MLSNG--------------ITP-GVVTYNTILHGLFQT- 601
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDV 438
S+ L+ +N+ G + Y L CK + EA ++ ++ S GLQL++
Sbjct: 602 --KRFSEAKELYLNMINS-GTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNI 658
Query: 439 GNYDALIEASITSQDFQSAFSLF 461
++ +I A + + A LF
Sbjct: 659 ITFNIMIGALLKGGRKEDAMDLF 681
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 23/242 (9%)
Query: 410 LKAYCKEHRTAEATQLVMD-ISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREAR 468
L C R EA +++ + G D +Y+ L++ + + A L M + +
Sbjct: 136 LNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQ 195
Query: 469 IYDLKG---SYLTIMTGLM-ENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGR 524
++ SY T++ G E + FL+ + +V T + ++I CKA
Sbjct: 196 VWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVT--YTTVIDGLCKAQL 253
Query: 525 LEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKF 584
+ A+ ++MI +PN TY LI+GY++ + W E+ R + G K
Sbjct: 254 FDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGK-------WKEVVRMLEEMSAGGPKP 306
Query: 585 EHNLVDAFLYALVKGG-------FFDAVM--QVVEKSQEMKVFVDKWKYKQAFMENHKKL 635
+ L L K G FFD+++ + + + + K A E H L
Sbjct: 307 NCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLL 366
Query: 636 KV 637
+
Sbjct: 367 NL 368
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 153/351 (43%), Gaps = 13/351 (3%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
+ Y C+ + G C G ++A V++ M P+ ++ L + ++ ++L
Sbjct: 159 DAYTCDTLIRGLC-GRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 217
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M + G + +V Y+ +++G + G ++ A L L E + S Y V+K
Sbjct: 218 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE-FLKNLPSYGCEPNTVS---YNIVLK 273
Query: 339 GFLQNGNVKGLANLIIE-AQKLEPSGIVVDRSVGFG-IISACVNLGLSDKAHSILDEMNA 396
G + L+ E QK P +V F +IS GL + A +L+++
Sbjct: 274 GLCTAERWEDAEELMGEMGQKGCPPNVVT-----FNMLISFLCRKGLVEPALEVLEQIPK 328
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
GCS Y P L A+CK+ + +A + + S G D+ +Y+ L+ A S +
Sbjct: 329 YGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 388
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A L +++ + SY T++ GL + + + L+E+V ++ +++I
Sbjct: 389 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK-GLQPDIITYSTIA 447
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMW 567
C+ R+EDA R ++ + PN Y ++I G + S + ++
Sbjct: 448 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLF 498
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 148/371 (39%), Gaps = 37/371 (9%)
Query: 141 DFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKV 200
D T TL+ + A A A++ M + R +P + L++ K S + +K+
Sbjct: 159 DAYTCDTLIRGLCGRGRTANALAVLDEMLRRR-CVPDVVTYTILLEATCKRSGYKQAMKL 217
Query: 201 FEE--------------------CCRIALDENLDFMK--------PNIYACNAALEGCCY 232
+E C +D+ ++F+K PN + N L+G C
Sbjct: 218 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 277
Query: 233 GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMV 292
+ DAE+++ M G PN +F L KGL E +E+ + ++G S +
Sbjct: 278 A-ERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSL 336
Query: 293 FYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANL 352
Y+ L+ + K ++ A + L + G +Y ++ ++G V L
Sbjct: 337 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI----VSYNTLLTALCRSGEVDVAVEL 392
Query: 353 IIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKA 412
+ + + + +++ + +I G + +A +L+EM + G + Y
Sbjct: 393 LHQLKDKGCAPVLISYNT---VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 449
Query: 413 YCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDL 472
C+E R +A + + G++ + Y+A+I ++ SA LF M
Sbjct: 450 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 509
Query: 473 KGSYLTIMTGL 483
+ +Y ++ GL
Sbjct: 510 ESTYTILIEGL 520
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 128/285 (44%), Gaps = 21/285 (7%)
Query: 294 YSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLI 353
Y+++++GY G +++A R +E+ ++ +T +++G G ++
Sbjct: 131 YNAMMAGYCGAGQVDAARRWC----AERAVERDAYTCDT---LIRGLCGRGRTANALAVL 183
Query: 354 IEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAY 413
E + VV ++ ++ A +A +LDEM GC+ + Y +
Sbjct: 184 DEMLRRRCVPDVVTYTI---LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 240
Query: 414 CKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLK 473
C+E R +A + + ++ S G + + +Y+ +++ T++ ++ A L +M + K
Sbjct: 241 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQ------K 294
Query: 474 GSYLTIMTGLMENH---RPELMAAFLDEVVEDPRVEVKTHD--WNSIIHAFCKAGRLEDA 528
G ++T M R L+ L+ + + P+ + +N ++HAFCK +++ A
Sbjct: 295 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKA 354
Query: 529 KRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
L M+ P+ +Y +L+ + + + + H++K K
Sbjct: 355 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 399
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 43/202 (21%)
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
++ C RTA A ++ ++ DV Y L+EA+ ++ A L +MR+
Sbjct: 167 IRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD--- 223
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAK 529
KG I+T +N +++ C+ GR++DA
Sbjct: 224 ---KGCTPDIVT------------------------------YNVVVNGICQEGRVDDAI 250
Query: 530 RTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLV 589
L+ + EPN +Y ++ G TAE+ W + + + GQKG
Sbjct: 251 EFLKNLPSYGCEPNTVSYNIVLKGLCTAER-------WEDAEELMGEMGQKGCPPNVVTF 303
Query: 590 DAFLYALVKGGFFDAVMQVVEK 611
+ + L + G + ++V+E+
Sbjct: 304 NMLISFLCRKGLVEPALEVLEQ 325
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 153/365 (41%), Gaps = 16/365 (4%)
Query: 209 LDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYAL 268
LD+N D PNI A ++G C V +A ++++TMSV G PN+ + L +
Sbjct: 599 LDDN-DCETPNIITYGALVDGLCKA-NRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCK 656
Query: 269 KGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF 328
G E E+ M+E G+ + YSSLI+ K L+ + + M ++
Sbjct: 657 TGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVL------SKMLENSC 710
Query: 329 SKET--YCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
+ Y +++ G + G + L++ K+E G + +I +G ++
Sbjct: 711 TPNVVIYTDMIDGLCKVGKTEEAYRLML---KMEEVGCYPNVITYTAMIDGFGKIGKIEQ 767
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
+ +M + GC+ Y + C EA +L+ ++ + + +Y +IE
Sbjct: 768 CLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIE 827
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+++F ++ L ++ E ++ Y ++ ++ R E L+E+ P +
Sbjct: 828 G--FNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLA 885
Query: 507 VKT-HDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
V + + S+I + A +++ A MI P T++ LI G ++ L
Sbjct: 886 VANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQ 945
Query: 566 MWHEI 570
+ I
Sbjct: 946 LSDSI 950
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 139/328 (42%), Gaps = 41/328 (12%)
Query: 237 VSDAEKV------IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQ 290
+ DA KV E M G+ P+ ++ L + GL ++ M +
Sbjct: 463 LCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPN 522
Query: 291 MVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLA 350
+V Y+SLI Y+K + A++ + L +E S + TY ++ G + G +
Sbjct: 523 VVTYTSLIHAYLKARKVFDANKLFEMML----LEGSKPNVVTYTALIDGHCKAGQIDKAC 578
Query: 351 NLIIEAQ-KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPT 409
+ Q +E S I + LD+ N C + + Y
Sbjct: 579 QIYARMQGDIESSDI---------------------DMYFKLDD-NDCE-TPNIITYGAL 615
Query: 410 LKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARI 469
+ CK +R EA +L+ +S +G + + YDALI+ + ++A +F M E
Sbjct: 616 VDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGY 675
Query: 470 YDLKGSYLTIMTGLMENHRPELMAAFLDEVVED---PRVEVKTHDWNSIIHAFCKAGRLE 526
+Y +++ L + R +L+ L +++E+ P V + + +I CK G+ E
Sbjct: 676 CPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVI----YTDMIDGLCKVGKTE 731
Query: 527 DAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+A R + +M + PN TY ++I+G+
Sbjct: 732 EAYRLMLKMEEVGCYPNVITYTAMIDGF 759
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 156/386 (40%), Gaps = 59/386 (15%)
Query: 247 MSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 306
MS G R + + G AY G + + SL+ + F VFY+ ++SG +
Sbjct: 231 MSNSGFRMDGCTLGCFAYSLCKAG---RCGDALSLLEKEEFVPDTVFYNRMVSGLCEASL 287
Query: 307 LESA-----------------SRTILL--CLGGGNM------------EQSDFSKETYCE 335
+ A + ILL CLG G + E ++E +
Sbjct: 288 FQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNS 347
Query: 336 VVKGFLQNGNVKGLANLIIEAQKL--EPSGIVVDRSVGFGIISACVN--------LGLSD 385
+V + ++ + L + K +P ++ + +G S C N L L++
Sbjct: 348 LVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIG----SICSNEELPGSDLLELAE 403
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
KA+S + ++ V + + L C + +A +++ ++ S G D Y +I
Sbjct: 404 KAYSEMLDLGVVLNKVNVSNFARCL---CGAGKFDKAFEIICEMMSKGFVPDDSTYSKVI 460
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVED--- 502
+ + AF LF +M++ I +Y ++ + + + DE++ D
Sbjct: 461 GFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCT 520
Query: 503 PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
P V + S+IHA+ KA ++ DA + M+ +PN TY +LI+G+ A Q
Sbjct: 521 PNVVT----YTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDK 576
Query: 563 VLMMWHEIKRKI-STDGQKGIKFEHN 587
++ ++ I S+D K + N
Sbjct: 577 ACQIYARMQGDIESSDIDMYFKLDDN 602
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 117/279 (41%), Gaps = 15/279 (5%)
Query: 281 LMNEF---GFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCE 335
LM+E G + +V Y++ I GY K +L + + L ME+ + TY
Sbjct: 251 LMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL------MEKEGVACNVVTYTL 304
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
++ GF G ++ L +++ GI D V IIS G +A + DEM
Sbjct: 305 LIHGFSNIGKIEEAQRLF---EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 361
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G Y + CK + A LV ++ G+ L+ ++ LI+ S
Sbjct: 362 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 421
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSI 515
A L M + + +Y +I +GL + +R + L +VE V T + ++
Sbjct: 422 EALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG-VSPNTMSFTTL 480
Query: 516 IHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
I +CK G +AKR R M PN TY LI+GY
Sbjct: 481 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGY 519
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 4/242 (1%)
Query: 332 TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSIL 391
TY ++G+ + ++ G+A ++ +E G+ + +I N+G ++A +
Sbjct: 266 TYNAFIEGYFKRLDLGGVAEIL---TLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322
Query: 392 DEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITS 451
+EM G + VY + C+ A L +++ GL Y ALI +
Sbjct: 323 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 382
Query: 452 QDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
++A L +M+ I + T++ G E+ + A L V+E +E
Sbjct: 383 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD-EALRLQVVMEKKGLESDVFA 441
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+NSI CK R ++AK L M+ PN ++ +LI+ Y + ++ E++
Sbjct: 442 YNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREME 501
Query: 572 RK 573
K
Sbjct: 502 EK 503
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 143/365 (39%), Gaps = 12/365 (3%)
Query: 211 ENLDFMKPNIYACNAA----LEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
E L M+ ACN L + + +A+++ E M G+ + + +
Sbjct: 285 EILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN 344
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
G ++ + L M + G Y +LI G K G +E+A + G G
Sbjct: 345 CRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG----I 400
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
D + + ++ G+ ++G V L + +E G+ D I S L D+
Sbjct: 401 DLNPVIFNTLIDGYCESGMVDEALRLQV---VMEKKGLESDVFAYNSIASGLCKLNRKDE 457
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A +L M G S + + YCKE EA ++ ++ G ++ Y+ LI+
Sbjct: 458 AKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLID 517
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVE 506
+ + A L ++ + + +++ G + + ++ DE+ + V
Sbjct: 518 GYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVP 577
Query: 507 VKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMM 566
+ ++I K GR E+A + M P+D Y SL+ +A++ S+ +
Sbjct: 578 -NVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADESISMQIQ 636
Query: 567 WHEIK 571
++K
Sbjct: 637 GSQVK 641
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 126/312 (40%), Gaps = 33/312 (10%)
Query: 199 KVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESS 258
++FEE ++ ++ ++ +I +CN C G +V A + + M+ G+ P+ +
Sbjct: 320 RLFEEMREKGIEADV-YVYTSIISCN-----CRSG--NVKRALVLFDEMTDKGLIPSAHT 371
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
+G L + G E L + M G V +++LI GY + G ++ A R ++
Sbjct: 372 YGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVV-- 429
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIV---VDRSVGFGII 375
ME+ + F N GL L +K E G++ V+R V +
Sbjct: 430 ----MEKKGLESDV-------FAYNSIASGLCKL---NRKDEAKGLLFSMVERGVSPNTM 475
Query: 376 SACVNLGLSDK------AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDI 429
S + + K A + EM G + Y + Y K EA +L ++
Sbjct: 476 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 535
Query: 430 SSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRP 489
+ GL DV +LI A LF +M + + +Y +++GL ++ R
Sbjct: 536 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRS 595
Query: 490 ELMAAFLDEVVE 501
E DE+ E
Sbjct: 596 EEAFKLYDEMKE 607
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/431 (19%), Positives = 183/431 (42%), Gaps = 32/431 (7%)
Query: 195 VAFLKVFEECCRIA-LDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKVIE 245
V +K+ CR +E+L F++ P++ C ++G + +++ A +V+E
Sbjct: 70 VHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGF-FNSRNIGKATRVME 128
Query: 246 TMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLG 305
+ G +P+ ++ L + E + M GF +V Y+ +I + G
Sbjct: 129 ILERYG-KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRG 187
Query: 306 NLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE--AQKLEPSG 363
L+ A I L N E + TY +++ + +G + L+ E ++ LEP
Sbjct: 188 KLDLALE-IFEELLKDNCEPTVI---TYTILIEATILDGGIDVAMKLLDEMLSKGLEPDT 243
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+ + II + DKA +L +++ GC + Y L+ + +E
Sbjct: 244 LTYN-----AIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGE 298
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+L+ ++ S G + +V + LI + A +L R M+E + Y ++ G
Sbjct: 299 KLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGF 358
Query: 484 MENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPN 543
R +L FL+ ++ D + ++N+I+ C+ G+ + A ++ + PN
Sbjct: 359 CREGRLDLATEFLEYMISDGCLP-DIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPN 417
Query: 544 DQTYLSLING-YVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFF 602
+Y +L + + + ++Y ++ M+ + + I D + +N + + L + G
Sbjct: 418 VSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPD-----EITYN---SLISCLCRDGMV 469
Query: 603 DAVMQVVEKSQ 613
D ++++ Q
Sbjct: 470 DEAIELLVDMQ 480
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 137/348 (39%), Gaps = 49/348 (14%)
Query: 209 LDENLD-FMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYA 267
LDE L ++P+ NA + G C + V A +++ ++S G +P+ ++ L
Sbjct: 231 LDEMLSKGLEPDTLTYNAIIRGMCKEMM-VDKAFELLRSLSSRGCKPDIITYNILLRTLL 289
Query: 268 LKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSD 327
+G + +L S M G +V +S LI + G +E A + +M++
Sbjct: 290 SRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLL------RSMKEKG 343
Query: 328 FSKETYC--EVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
+ YC ++ GF + G + LA +E + G + D I++ G +D
Sbjct: 344 LKPDAYCYDPLIAGFCREGRLD-LATEFLEY--MISDGCLPDIVNYNTIMAGLCRTGKAD 400
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
+A + ++++ GC + Y A A ++++ + + G+ D Y++LI
Sbjct: 401 QALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLI 460
Query: 446 EASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRV 505
A L DM+ R +RP +++
Sbjct: 461 SCLCRDGMVDEAIELLVDMQSGR------------------YRPNVVS------------ 490
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
+N I+ CK R DA L M +PN+ TY+ LI G
Sbjct: 491 ------YNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEG 532
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 159/376 (42%), Gaps = 22/376 (5%)
Query: 193 NFVAFLKVFEECCRIA-LDENLDFMK--------PNIYACNAALEGCCYGLQSVSDAEKV 243
N ++F V + CR+ +D+ ++ + + Y + + G C + +A +
Sbjct: 174 NGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLC-NEGRIDEAVSL 232
Query: 244 IETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVK 303
++ M V G PN +F L KG + +L M G V Y+SL+ G
Sbjct: 233 LDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCL 292
Query: 304 LGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSG 363
G L+ A ++L + +D T+ +V GF+++G +++ LE G
Sbjct: 293 KGKLDKA-MSLLNRMVANKCVPNDI---TFGTLVDGFVKHGRALDGVRVLVS---LEEKG 345
Query: 364 IVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEAT 423
+ +IS G + + EM GC VY + C+E + EA
Sbjct: 346 YRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAK 405
Query: 424 QLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL 483
+ ++++ + G + Y +L+ + D A ++++M + + Y ++ GL
Sbjct: 406 EYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGL 465
Query: 484 MENHR-PELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF--LQF 540
+N + E + + + +++V ++S+IH FC A +E + +M+ +
Sbjct: 466 CKNGKLKEALIVWKQMLSRGIKLDVVA--YSSMIHGFCNAQLVEQGMKLFNQMLCHNPKL 523
Query: 541 EPNDQTYLSLINGYVT 556
+P+ TY L+N + T
Sbjct: 524 QPDVVTYNILLNAFCT 539
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/395 (19%), Positives = 160/395 (40%), Gaps = 25/395 (6%)
Query: 224 NAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMN 283
N ++ C+ L ++ VI++ S ++PN SF + G ++ VE+ M+
Sbjct: 144 NVVIQEGCFDL-ALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMS 202
Query: 284 EFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQN 343
+ + YS+L+ G G ++ A L +E + + + ++ +
Sbjct: 203 DRNCVADGYTYSTLMHGLCNEGRIDEAVSL----LDEMQVEGTFPNPVAFNVLISALCKK 258
Query: 344 GNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGL 403
G++ + L+ + G V + ++ G DKA S+L+ M A C
Sbjct: 259 GDLSRASKLV---DNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPND 315
Query: 404 GVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRD 463
+ + + K R + ++++ + G + + +Y +LI + L+++
Sbjct: 316 ITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKE 375
Query: 464 MREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAG 523
M E Y ++ GL +P+ +L E+ + ++S++ + +AG
Sbjct: 376 MVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTP-NSFTYSSLMWGYFEAG 434
Query: 524 RLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIK 583
+ A + M ++ Y LING + L++W ++ +GIK
Sbjct: 435 DIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQML-------SRGIK 487
Query: 584 FEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVF 618
+D Y+ + GF +A Q+VE Q MK+F
Sbjct: 488 -----LDVVAYSSMIHGFCNA--QLVE--QGMKLF 513
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 128/317 (40%), Gaps = 47/317 (14%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AE++ M LG P+E ++ + E +++++ M+ G+ S V Y+++IS
Sbjct: 88 AEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIIS 147
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TYCEVVKGFLQNGNVKGLANLIIEAQ 357
G VK L+ A + G FS TY ++ G L++GN+
Sbjct: 148 GLVKSKMLDEAINLYYQLMSEG------FSPTPCTYGPLLDGLLKDGNI----------- 190
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+ A ++ DEM CGC +Y L Y
Sbjct: 191 ---------------------------EDAEALFDEMLECGCEPNCAIYNILLNGYRIAG 223
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
T + +L + G+ D+ +Y +I+ S F+ + + + +Y
Sbjct: 224 DTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYN 283
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++ GL ++ R E + ++ +E + + +NS+I KAG+ +A + ++
Sbjct: 284 LLIHGLGKSGRLEEALSLYND-MEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLA 342
Query: 538 LQFEPNDQTYLSLINGY 554
++PN TY +LI GY
Sbjct: 343 KGWKPNVFTYNALIRGY 359
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 94/251 (37%), Gaps = 34/251 (13%)
Query: 357 QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKE 416
+K E G+ + +I V+ L D A + EM GC Y L A K
Sbjct: 58 KKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKS 117
Query: 417 HRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSY 476
R + ++ ++ + G + Y+ +I + S+ A +L+ + +Y
Sbjct: 118 MRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTY 177
Query: 477 LTIMTGLMENHRPELMAAFLDEVVE---DPRVEV-------------------------- 507
++ GL+++ E A DE++E +P +
Sbjct: 178 GPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVE 237
Query: 508 -----KTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFS 562
+ +I C GRL D +++ + EP+ TY LI+G + +
Sbjct: 238 QGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEE 297
Query: 563 VLMMWHEIKRK 573
L +++++++K
Sbjct: 298 ALSLYNDMEKK 308
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 118/320 (36%), Gaps = 51/320 (15%)
Query: 237 VSDAEKVIETMSVLGVRPNESSFG-FLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
+ D K+ E M G + ++ ++ L K L E I LM+E GFS Y
Sbjct: 120 IEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE-GFSPTPCTYG 178
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIE 355
L+ G +K GN+E A E + E C + N+++
Sbjct: 179 PLLDGLLKDGNIEDAEALF--------DEMLECGCEPNCAIY-------------NILLN 217
Query: 356 AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK 415
++ G ++K + + M G + + Y + C
Sbjct: 218 GYRIA---------------------GDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCA 256
Query: 416 EHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGS 475
+ R + ++ GL+ D+ Y+ LI S + A SL+ DM + I +
Sbjct: 257 DGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYT 316
Query: 476 YLTIMTGLMENHRPELMAAFLDEVVE---DPRVEVKTHDWNSIIHAFCKAGRLEDAKRTL 532
Y +++ L + + +E++ P V +N++I + +G E+A
Sbjct: 317 YNSLILYLGKAGKAAEAGKMYEELLAKGWKPNV----FTYNALIRGYSVSGSPENAFAAY 372
Query: 533 RRMIFLQFEPNDQTYLSLIN 552
RMI PN TY+ L N
Sbjct: 373 GRMIVGGCRPNSSTYMQLPN 392
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
P ++ CK A +LV + G+ L G+Y+ALI + A LF +M+
Sbjct: 39 PIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRL 98
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
+ +Y I+ + ++ R E M +E + + + +N+II K+ L++
Sbjct: 99 GCDPDEFTYHLILDAMGKSMRIEDMLKIQEE-MHNKGYKSTYVTYNTIISGLVKSKMLDE 157
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLING 553
A +++ F P TY L++G
Sbjct: 158 AINLYYQLMSEGFSPTPCTYGPLLDG 183
>gi|255660998|gb|ACU25668.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 376
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 10/254 (3%)
Query: 323 MEQSDFSKE--TYCEVVKGFLQNGNV-KGLANLIIEAQKLEPSGIVVDRSVGFGIISACV 379
M++SDF ++ TY +V GF +NG + K L L + QK G V+D +I+
Sbjct: 85 MKKSDFVEDSITYGILVHGFCKNGYINKSLHVLEMAEQK----GGVLDAFAYSAMINGLC 140
Query: 380 NLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVG 439
DKA S+L++M GC VY + + +A ++ ++ + +
Sbjct: 141 KEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVRCSPTII 200
Query: 440 NYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEV 499
Y+ LI ++ F A+ L ++M E + +Y +M GL +H+ E ++V
Sbjct: 201 TYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQV 260
Query: 500 VEDP-RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAE 558
+ + +V+ H N +IH C G+ + A M + PN T+ +L+ G+
Sbjct: 261 ISKGFKPDVQMH--NILIHGLCSVGKTQLALSLYJDMNRWKCAPNLVTHNTLMEGFYKDG 318
Query: 559 QYFSVLMMWHEIKR 572
+ L++W + R
Sbjct: 319 DIRNALVIWARVLR 332
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 111/289 (38%), Gaps = 8/289 (2%)
Query: 258 SFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLC 317
++G L + + G K + + + + G YS++I+G K NL+ A +
Sbjct: 96 TYGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDM 155
Query: 318 LGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISA 377
+ G + Y ++ G + + + E + S ++ + +I+
Sbjct: 156 IKSGCKPNA----HVYNTLINGLVGASKFEDAIRVFREMGTVRCSPTIITYNT---LING 208
Query: 378 CVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLD 437
+ +A+ ++ EM G + + Y +K C +H+ A QL + S G + D
Sbjct: 209 LCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPD 268
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
V ++ LI + Q A SL+ DM + ++ T+M G ++
Sbjct: 269 VQMHNILIHGLCSVGKTQLALSLYJDMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWA 328
Query: 498 EVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQT 546
V+ + +E +N + C R+ DA L + + P T
Sbjct: 329 RVLRNG-LEPDIISYNITLKGLCSCNRICDAILFLHDAVRKKIVPTKIT 376
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 154/360 (42%), Gaps = 15/360 (4%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSF-GFLAYLYALKGLQEKI 275
+P+ + + G C VSDA +++ M +G +P+ ++ + L K + +
Sbjct: 152 EPDRVTIGSLVNGFCRR-NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKE--TY 333
+ + + G +V Y++L++G A+R + +M + + TY
Sbjct: 211 DFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAARLL------SDMIKKKITPNVITY 263
Query: 334 CEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
++ F++NG V L E ++ +V S +I+ D+A+ + D
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS---SLINGLCLHDRIDEANQMFDL 320
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M + GC + Y + +CK R + +L ++S GL + Y+ LI+ + D
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWN 513
A F M I +Y ++ GL +N E A + E ++ +++ +
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE-KALVIFEDMQKREMDLDIVTYT 439
Query: 514 SIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRK 573
++I CK G++E+A + +P+ TY ++++G T V ++ ++K++
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 128/339 (37%), Gaps = 61/339 (17%)
Query: 133 IEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNS 192
IE+ + T L+ + N++ + A L+ M K + P + L+D KN
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK-ITPNVITYSALLDAFVKNG 274
Query: 193 NFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGV 252
+ ++FEE R+++D P+I ++ + G C + +A ++ + M G
Sbjct: 275 KVLEAKELFEEMVRMSID-------PDIVTYSSLINGLCLH-DRIDEANQMFDLMVSKGC 326
Query: 253 RPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR 312
+ S+ L + E ++L M++ G S V Y++LI G+ + G+++ A
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 313 TILLCLGGGNMEQSDF---SKE--TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVD 367
Q DF S + TY ++ G NG +
Sbjct: 387 F---------FSQMDFFGISPDIWTYNILLGGLCDNGEL--------------------- 416
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
+KA I ++M + + Y ++ CK + EA L
Sbjct: 417 -----------------EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMRE 466
+S GL+ D+ Y ++ T +L+ M++
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 108/519 (20%), Positives = 212/519 (40%), Gaps = 32/519 (6%)
Query: 71 LETNLHKSLLTNNT-----------DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDN 119
LE + ++T NT D A F+ + + P+ N++I L Q+
Sbjct: 217 LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEV 276
Query: 120 HNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFEL 179
+ F +V +K K + T +T++ + A A + + M +R P +
Sbjct: 277 DMAEGVFQKMV---DKGVKPSNV-TYNTIIDGLCKAQAVDRAEGVFQQMI-DRGVKPDHV 331
Query: 180 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD 239
++D K VF++ +D+ + KP+ ++G C QSV
Sbjct: 332 TYNTIIDGLCKAQAIDKAEGVFQQ----MIDKGV---KPDNLTYTIIIDGLCKA-QSVDR 383
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
AE V + M GV+PN ++ L + Y G E++V+ M+ + Y L+
Sbjct: 384 AEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLD 443
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
K G A R++ + ++ S Y ++ G+ + G + + +L+ +
Sbjct: 444 YLCKNGKCNEA-RSLFDSMIRKGIKPS---VTIYGIMLHGYGKKGALSEMHDLL---NLM 496
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 419
+GI + + +I A + D+ I +M G S + Y + A CK R
Sbjct: 497 VANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRV 556
Query: 420 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 479
+A + + G+ + +++L+ T ++ LF +M I + T+
Sbjct: 557 DDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTV 616
Query: 480 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 539
+ L + R +D +V ++ +N++I C A R+++A + L M+
Sbjct: 617 LCNLCKEGRVMEARRLIDSMVC-MGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAG 675
Query: 540 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDG 578
+PN +Y +L++GY A + + ++ E+ RK T G
Sbjct: 676 LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPG 714
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 148/342 (43%), Gaps = 17/342 (4%)
Query: 216 MKPNIYACNAALEGCCYGLQ-SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEK 274
+KP++ L G YG + ++S+ ++ M G+ PN F + YA + + ++
Sbjct: 466 IKPSVTIYGIMLHG--YGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDE 523
Query: 275 IVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYC 334
++ + M + G S +V Y +LI KLG ++ A +L E + +
Sbjct: 524 VMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDA----VLQFNQMINEGVTPNNVVFN 579
Query: 335 EVVKGFLQNGNVKGLANLIIEA--QKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILD 392
+V G + + L +E Q + P + + ++ G +A ++D
Sbjct: 580 SLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNT-----VLCNLCKEGRVMEARRLID 634
Query: 393 EMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
M G + Y + +C R EA +L+ + S+GL+ ++ +Y+ L+ +
Sbjct: 635 SMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAG 694
Query: 453 DFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHR-PELMAAFLDEVVEDPRVEVKTHD 511
+A+ LFR+M + +Y TI+ GL + R E +++ + + T
Sbjct: 695 RIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICT-- 752
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
++ I+ FCK ++A + + + + + + T+ +I+G
Sbjct: 753 YSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDG 794
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 122/317 (38%), Gaps = 49/317 (15%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N CN EG V +A ++I++M +G++P+ S+ L + ++ V+L
Sbjct: 614 NTVLCNLCKEG------RVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKL 667
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
M G +V Y++L+ GY K G +++A L G ETY ++
Sbjct: 668 LDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTP----GVETYNTILN 723
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
G ++G EA++L VN+ S K SI
Sbjct: 724 GLFRSGRFS-------EARELY------------------VNMIKSRKLWSI-------- 750
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
C+ Y L +CK + EA ++ + S LQLD+ ++ +I+ + A
Sbjct: 751 CT-----YSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAM 805
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHA 518
LF + + +Y I L+E E + V+E +H N++I
Sbjct: 806 DLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLF-SVMEKSGTAPNSHMLNALIRK 864
Query: 519 FCKAGRLEDAKRTLRRM 535
G + A L ++
Sbjct: 865 LLDRGEIPRAGAYLSKL 881
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 150/364 (41%), Gaps = 12/364 (3%)
Query: 217 KPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
KPN++ + G C ++ AE ++ M G++PN +++ L + G ++
Sbjct: 319 KPNVHTYTVMIGGYCRE-GKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAF 377
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
EL + M + GF + Y+++I G+ K G ++ A + + + G F K TY +
Sbjct: 378 ELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG----LKFDKITYTIL 433
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNA 396
+ + G++ +L ++ +G D +IS +++ D+
Sbjct: 434 ITEHCKQGHITYALDLF---DRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLM 490
Query: 397 CGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQS 456
G Y + YCK R+ A ++ + +G D Y ALI +
Sbjct: 491 IGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEE 550
Query: 457 AFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSII 516
A +L+ M + R+ + + +T+ + + + LD + D R +V H + ++
Sbjct: 551 AKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRL--DKRQQV--HTVDVVV 606
Query: 517 HAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKIST 576
G ++ A L++++ + + TY IN +Y M + +KIS+
Sbjct: 607 RKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEMSEKFSKKISS 666
Query: 577 DGQK 580
+K
Sbjct: 667 FKEK 670
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 156/376 (41%), Gaps = 20/376 (5%)
Query: 187 ICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEG--CCYGLQSV------S 238
+C +F A + V CCR E +D + ++ +L+ C ++S+
Sbjct: 177 VCPDERSFRALVVV---CCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFK 233
Query: 239 DAEKVIETMSVLGVRPNESSF-GFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSL 297
D + M G PN ++ ++ L + +++ LE ++ G + +++L
Sbjct: 234 DVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGR-GLKPNVYTHTTL 292
Query: 298 ISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQ 357
I G K+G E A R L + + + + TY ++ G+ + G + L++
Sbjct: 293 IDGLCKIGWTERAFRLFLKLIKSSSYKPN---VHTYTVMIGGYCREGKLARAEMLLV--- 346
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
++ G+ + + +I G D+A ++++M G + Y + +CK+
Sbjct: 347 RMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKG 406
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+ EA +++ +S GL+ D Y LI A LF M E +Y
Sbjct: 407 KIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYT 466
Query: 478 TIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIF 537
++++ + + E F D+ + + K + S+I +CK GR A R RM+
Sbjct: 467 SLISTYCQQRQMEESQKFFDKCLMIGLLPTK-QTYTSMIAGYCKVGRSTLALRVFERMVQ 525
Query: 538 LQFEPNDQTYLSLING 553
+ TY +LI+G
Sbjct: 526 NGCFADSITYGALISG 541
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 136/354 (38%), Gaps = 50/354 (14%)
Query: 240 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 299
A KV + M+ GV P+E SF L + +G E++ L + M +GFS + ++
Sbjct: 165 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 224
Query: 300 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 359
+ G + S L G Y + G + VK +++ +++
Sbjct: 225 SLCEKGRFKDVSEFFRRMLETGTPPNV----VNYTAWIDGLCKRRYVKQAFHVL---EEM 277
Query: 360 EPSGIVVDRSVGFGIISACVNLGLSDKAHSI-LDEMNACGCSVGLGVYVPTLKAYCKEHR 418
G+ + +I +G +++A + L + + + Y + YC+E +
Sbjct: 278 VGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGK 337
Query: 419 TAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLT 478
A A L++ + GL+ + Y LI F AF L M++ +Y
Sbjct: 338 LARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNA 397
Query: 479 IMTG------LMENHRPELMAA-----------------------------FLDEVVED- 502
++ G + E ++ MA D +VE+
Sbjct: 398 VIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENG 457
Query: 503 --PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
P +E + S+I +C+ ++E++++ + + + P QTY S+I GY
Sbjct: 458 CCPDIEA----YTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGY 507
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 111/273 (40%), Gaps = 7/273 (2%)
Query: 362 SGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAE 421
+G+ D ++ C G ++ ++L M G S+ +++ C++ R +
Sbjct: 175 AGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKD 234
Query: 422 ATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMT 481
++ + +G +V NY A I+ + + AF + +M + ++ T++
Sbjct: 235 VSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLID 294
Query: 482 GLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFE 541
GL + E ++++ + H + +I +C+ G+L A+ L RM+ +
Sbjct: 295 GLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLK 354
Query: 542 PNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGF 601
PN TY +LI G+ + + +++K Q+G +A + K G
Sbjct: 355 PNTNTYTTLIGGHCKGGSFDRAFELMNKMK-------QEGFLPNIYTYNAVIDGFCKKGK 407
Query: 602 FDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKK 634
+V+ + + DK Y E+ K+
Sbjct: 408 IQEAYKVLRMATSQGLKFDKITYTILITEHCKQ 440
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 164/417 (39%), Gaps = 79/417 (18%)
Query: 231 CYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEF---GF 287
CY Q D +V E + ++ E++ G L I ++E+L NE
Sbjct: 175 CYVRQK--DDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNV 232
Query: 288 SSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVK 347
+ Y+++I+ Y + GN+ A++ + C+G G + ++ TY ++KGF + G ++
Sbjct: 233 VGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNG----VEPNERTYGVLIKGFCKIGQME 288
Query: 348 GLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYV 407
L+ + Q G+ +++ + +I G+ D A I M G + + Y
Sbjct: 289 AAEMLLADMQG---QGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTY- 344
Query: 408 PTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREA 467
L + G+ + Y LI D A LFR+M E
Sbjct: 345 ---------------NTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAE- 388
Query: 468 RIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLED 527
KG+ +++T ++ +IH + K GR+ +
Sbjct: 389 -----KGATPSVLT------------------------------YSVMIHGYAKKGRIRE 413
Query: 528 AKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHN 587
A+R + M F P+ TY SL++G+ + L ++ E+K Q+G E N
Sbjct: 414 AERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMK-------QRGT--EPN 464
Query: 588 LV--DAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKYKQAF----MENHKKLKVA 638
+V A + L K G +A Q+ + + + D Y +N K +KV+
Sbjct: 465 VVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDVKVS 521
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 113/257 (43%), Gaps = 8/257 (3%)
Query: 368 RSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVM 427
RS+ F ++S L+D A + + +C SV + CK R +A +L+
Sbjct: 96 RSLTFSLLSLRRAGRLADAAGLLERALGSCPGSVSPFAASVVVDGLCKSGRVDDARRLLD 155
Query: 428 DISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENH 487
D+ G+ L+ Y++L++ + +D + M I G+Y ++ L
Sbjct: 156 DMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTAR 215
Query: 488 RPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTY 547
+ A +E+ + V + + ++I+A+C+AG + A + L + EPN++TY
Sbjct: 216 DISKVEALFNEMKAN-NVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTY 274
Query: 548 LSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQ 607
LI G+ Q + M+ +++ GQ G+ + + + + G D ++
Sbjct: 275 GVLIKGFCKIGQMEAAEMLLADMQ------GQ-GVGLNQIIFNTMIDGYCRKGMVDDALK 327
Query: 608 VVEKSQEMKVFVDKWKY 624
+ +++ V ++ + Y
Sbjct: 328 IKAAMEKIGVELNIYTY 344
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 106/277 (38%), Gaps = 26/277 (9%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
++Y A + C ++ A KV++ GV PNE ++G L + G E L
Sbjct: 235 DVYLYTAVINAYCRA-GNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEML 293
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVK 338
+ M G + ++++I GY + G ++ A + ME+ Y
Sbjct: 294 LADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKI------KAAMEKIGVELNIYT---- 343
Query: 339 GFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACG 398
N GL + G+V + +IS G +A + EM G
Sbjct: 344 ---YNTLACGLCRM----------GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 390
Query: 399 CSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAF 458
+ + Y + Y K+ R EA + ++ G DV Y +L+ + A
Sbjct: 391 ATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVAL 450
Query: 459 SLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAF 495
LF +M++ +Y +++GL + R E AAF
Sbjct: 451 KLFEEMKQRGTEPNVVAYTALISGLAKEGRSE--AAF 485
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 12/274 (4%)
Query: 282 MNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFL 341
+ ++G +V Y++L++GY++LG+L+ R L G Q D TY ++ G
Sbjct: 168 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVY--TYSVLINGLC 223
Query: 342 QNGNVKGLANLIIE--AQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGC 399
+ + G L E + L P+G+ + C N G D A I +M +
Sbjct: 224 KESKMDGANGLFDEMLVKGLVPNGVTFTTLID----GHCKN-GRVDLAMEIYKQMLSQSL 278
Query: 400 SVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFS 459
L Y + CK+ +A L+ ++S GL+ D Y LI+ D +AF
Sbjct: 279 LPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFE 338
Query: 460 LFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAF 519
+ M + I +Y +++GL + R L E++ ++ T + I++ F
Sbjct: 339 HRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS-VGLKPDTGTYTMIVNEF 397
Query: 520 CKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
CK G + + L+ M P+ TY L+NG
Sbjct: 398 CKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 122/321 (38%), Gaps = 39/321 (12%)
Query: 178 ELWGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKP-NIYACNAALEGCCYGLQS 236
+LW F D CRK + LK F+ +E L+ P ++Y N + C
Sbjct: 102 KLWVPF--DTCRKVLEHLMKLKYFKLVWGF-YEEILECGYPASLYFFNILMHRFCKD-GD 157
Query: 237 VSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSS 296
+ A+ V + ++ G+RP+ S+ L Y G ++ L+S M G + YS
Sbjct: 158 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 217
Query: 297 LISGYVKLGNLESASRTI----------------LLCLGGGNMEQSDFSKE--------- 331
LI+G K ++ A+ L G + D + E
Sbjct: 218 LINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 332 ------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSD 385
TY ++ G + G++K +LI E + G+ D+ +I C G D
Sbjct: 278 LLPDLITYNTLIYGLCKKGDLKQAHDLIDE---MSMKGLKPDKFTYTTLIDGCCKEGDLD 334
Query: 386 KAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALI 445
A M + Y + C+E R+ +A +++ ++ S GL+ D G Y ++
Sbjct: 335 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIV 394
Query: 446 EASITSQDFQSAFSLFRDMRE 466
D L ++M+
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQR 415
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 437 DVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFL 496
D+ + LI A + S + A +R RE +++ + ++ LM+ +L+ F
Sbjct: 71 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 497 DEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYV 555
+E++E + +N ++H FCK G + A+ + P+ +Y +L+NGY+
Sbjct: 131 EEILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 152/360 (42%), Gaps = 18/360 (5%)
Query: 258 SFGFLAYLYALK---GLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTI 314
FG L+++ G+ E+ + S M F + + L+ + KLG + R
Sbjct: 62 GFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFF 121
Query: 315 LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
+G G S + TY ++ + G+++ L ++++ G++ D +
Sbjct: 122 KDMIGAG----SKPTVFTYNIMIDCMWKEGDIEAARGLF---EEMKFRGLIPDTVTYNSM 174
Query: 375 ISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGL 434
I +G D +EM + C + Y + +CK + + + ++ SGL
Sbjct: 175 IDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGL 234
Query: 435 QLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAA 494
+ +V +Y L++A Q A + DMR + +Y +++ +
Sbjct: 235 KPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFR 294
Query: 495 FLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
+E++E VE + ++I C A R+++A++ +M+ PN +Y +LI+G+
Sbjct: 295 LANEMLE-VGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGF 353
Query: 555 VTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQE 614
V A+ L + +E+K +GI+ + L F++ L +A V+ + QE
Sbjct: 354 VKAKNMDRALELLNELK-------GRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQE 406
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 124/285 (43%), Gaps = 13/285 (4%)
Query: 219 NIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVEL 278
N+ A ++G C + + +AEK+ M GV PN +S+ L + + ++ +EL
Sbjct: 307 NVVTYTALIDGLC-DAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALEL 365
Query: 279 ESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKET--YCEV 336
+ + G ++ Y + I G L +E+A + M+++ T Y +
Sbjct: 366 LNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVM------NEMQENGIKANTLIYTTL 419
Query: 337 VKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEM-N 395
+ + ++GN +L+ E Q+L+ VV V +I L KA M N
Sbjct: 420 MDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCV---LIDGLCKNKLVSKAIDYFGRMSN 476
Query: 396 ACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQ 455
G VY + CKE++ AT L ++ GL D Y +L++ ++ +
Sbjct: 477 DFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNML 536
Query: 456 SAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVV 500
A +L M E + +Y +++ G + ++ + +FL+E++
Sbjct: 537 EALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMI 581
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 90/469 (19%), Positives = 182/469 (38%), Gaps = 20/469 (4%)
Query: 85 DEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVYVIEKNPKLLDFQT 144
+EA + F + +FP N L+ + L +KR F ++ K P + T
Sbjct: 80 EEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSK-PTVF---T 135
Query: 145 VHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICRKNSNFVAFLKVFEEC 204
+ ++ M A L + M K R +P + ++D K + FEE
Sbjct: 136 YNIMIDCMWKEGDIEAARGLFEEM-KFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEM 194
Query: 205 CRIALDENLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAY 264
++ + P++ N+ + C + E E M G++PN S+ L
Sbjct: 195 KSMSCE-------PDVITYNSLINCFCKSGKLPKGLEFYRE-MKQSGLKPNVVSYSTLVD 246
Query: 265 LYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNME 324
+ + + ++ ++ M G Y+SL+ K+GNL A R L G
Sbjct: 247 AFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG--- 303
Query: 325 QSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLS 384
+++ TY ++ G +K L K+ +G++ + + +I V
Sbjct: 304 -VEWNVVTYTALIDGLCDAERMKEAEKLF---GKMVTAGVIPNLASYNALIHGFVKAKNM 359
Query: 385 DKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDAL 444
D+A +L+E+ G L +Y + C + A ++ ++ +G++ + Y L
Sbjct: 360 DRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTL 419
Query: 445 IEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPR 504
++A S + L +M+E ++ ++ GL +N + + D
Sbjct: 420 MDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFG 479
Query: 505 VEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLING 553
++ + ++I CK +++ A +M P+ Y SL++G
Sbjct: 480 LQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDG 528
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 162/413 (39%), Gaps = 27/413 (6%)
Query: 218 PNIYACNAALEGCCYG-LQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIV 276
P+ N+ ++G YG + + D E M + P+ ++ L + G K +
Sbjct: 166 PDTVTYNSMIDG--YGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGL 223
Query: 277 ELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEV 336
E M + G +V YS+L+ + K ++ A + + G++ ++F TY +
Sbjct: 224 EFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVP-NEF---TYTSL 279
Query: 337 VKGFLQNGNVKG---LANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDE 393
V + GN+ LAN ++E G+ + +I + +A + +
Sbjct: 280 VDANCKIGNLSDAFRLANEMLEV------GVEWNVVTYTALIDGLCDAERMKEAEKLFGK 333
Query: 394 MNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQD 453
M G L Y + + K A +L+ ++ G+Q D+ Y I +
Sbjct: 334 MVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEK 393
Query: 454 FQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-DPRVEVKTHDW 512
++A + +M+E I Y T+M ++ P L+E+ E D V V T +
Sbjct: 394 IEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVT--F 451
Query: 513 NSIIHAFCKAGRLEDAKRTLRRMIF-LQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+I CK + A RM +PN Y ++I+G Q + ++ ++
Sbjct: 452 CVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQM- 510
Query: 572 RKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
Q+G+ + + + +K G + + +K E+ + +D Y
Sbjct: 511 ------AQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAY 557
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 177/432 (40%), Gaps = 67/432 (15%)
Query: 214 DFMKPNIYACNAALEGCCY-GLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQ 272
D +P+ + N + G C G+ V +A ++++ M G+RPN ++ L +
Sbjct: 209 DGCRPDCFTYNTLVHGVCRRGI--VDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRV 266
Query: 273 EKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASR------------------TI 314
E+ V + M E G S+ Y SL+ G + E A R T+
Sbjct: 267 EEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTL 326
Query: 315 LLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGI 374
L CL ++D KE E+ K + G + G S F I
Sbjct: 327 LYCL-----SKNDMDKEAV-ELAKKMSKRGYLLG--------------------STTFSI 360
Query: 375 ISAC-VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSG 433
+ C V + S ++D+ G ++G +Y+ +K++ + ++A + + S G
Sbjct: 361 VIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDG 420
Query: 434 LQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMA 493
L V +Y+ +I+ + + + A + M+E+ ++ T++ G ++
Sbjct: 421 LLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAK 480
Query: 494 AFLDEVVEDPRV-EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLIN 552
AFL V+E + +V T + S+I C +L+DA M PN QTY LI+
Sbjct: 481 AFLKMVMEHGLMPDVIT--FTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIH 538
Query: 553 GYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKS 612
G +A + E+ K+ DG + N A + + + M+ +EK+
Sbjct: 539 GLCSAGHVSKAI----ELLNKMKMDGITPDAYSFN---APILSFCR-------MRKIEKA 584
Query: 613 QEMKVFVDKWKY 624
Q K+F D +Y
Sbjct: 585 Q--KLFNDMSRY 594
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 7/213 (3%)
Query: 235 QSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFY 294
+ +S A K M G+ + S+ + +A G E+ +E +M E GFS +V +
Sbjct: 404 KDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTF 463
Query: 295 SSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLII 354
++LI+GY+KLGN+ A + + + G M T+ ++ G + N
Sbjct: 464 NTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVI----TFTSLIDGLCHTHQLDDAFNCFS 519
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
E + G+ + +I + G KA +L++M G + + + ++C
Sbjct: 520 EMSEW---GVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFC 576
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ + +A +L D+S G+ D Y+ALI+A
Sbjct: 577 RMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKA 609
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 367 DRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLV 426
DRSV + A + G + +++ ++ +CGC V + ++++ + A ++
Sbjct: 109 DRSVRRALGDALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVF 168
Query: 427 MDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMEN 486
+ + GL+ Y+A+I AS+ + +A+ F+ M +Y T++ G+
Sbjct: 169 VQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVC-- 226
Query: 487 HRPELMAAFLDEVVEDPRVEVKTH--DWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPND 544
R ++ L V + R ++ + + ++ FC A R+E+A L RM +
Sbjct: 227 -RRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATE 285
Query: 545 QTYLSLINGY---VTAEQYFSVLMMWHE 569
TY SL++G + E+ + +L W E
Sbjct: 286 ATYRSLVHGAFRCLEKERAYRMLSEWIE 313
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
+ S+E C +V+ + + G + ++ +L G+ ++ +I+A V G D
Sbjct: 142 EVSEELLCALVESWGRLGLAHYAHEVFVQVPRL---GLRPSTAIYNAVIAASVRAGAVDA 198
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
A+ +M A GC Y + C+ EA +LV + +G++ +V Y L++
Sbjct: 199 AYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVD 258
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVE-DP 503
+ + A + M+E + + +Y +++ G E L E +E DP
Sbjct: 259 GFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDP 316
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 155/354 (43%), Gaps = 10/354 (2%)
Query: 218 PNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVE 277
P++ ++ + G C +S+A++++ M +GV PN ++ L G +
Sbjct: 271 PDVVTYSSIVNGLCKD-GRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFA 329
Query: 278 LESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVV 337
+S + G + +V ++L+ G K + A + L N+ + TY ++
Sbjct: 330 CQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEA-EDMFRALSKLNLIPNSI---TYTALI 385
Query: 338 KGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNAC 397
G+ + G+++ + +L+ E ++ + V+ S II+ G+ D+A +++ +M
Sbjct: 386 DGYCKVGDMERVESLLQEMEEKHINPNVITYS---SIINGYTKKGILDEAINVMKKMLDQ 442
Query: 398 GCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSA 457
VY + YCK + AT L ++ SGL+++ +D L+ + A
Sbjct: 443 NIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEA 502
Query: 458 FSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIH 517
L +D+ + +Y ++M G + + ++E+ E + +N +I+
Sbjct: 503 EELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTE-KSIPFDVVTYNVLIN 561
Query: 518 AFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+ G+ E AK MI + PN TY +I Y + + L +W+E+K
Sbjct: 562 GLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMK 614
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 171/416 (41%), Gaps = 66/416 (15%)
Query: 216 MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKI 275
M ++ C ++G + +AE + +S L + PN ++ L Y G E++
Sbjct: 339 MTLDLVMCTTLVDGL-FKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERV 397
Query: 276 VELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCE 335
L M E + ++ YSS+I+GY K G L+ A +
Sbjct: 398 ESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVM--------------------- 436
Query: 336 VVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMN 395
+K+ I+ + V +I G + A + +EM
Sbjct: 437 ---------------------KKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMK 475
Query: 396 ACGCSVG---LGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQ 452
G V V V LK + R EA +L+ D++S GL LD NY +L++ +
Sbjct: 476 LSGLKVNNVLFDVLVNNLK---RGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAG 532
Query: 453 DFQSAFSLFRDMREARI-YDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVKTHD 511
+A ++ +M E I +D+ +Y ++ GL+E+ + E + + + + +
Sbjct: 533 KESAALNMVEEMTEKSIPFDVV-TYNVLINGLLEHGKYEAKSVYSGMI--EMGLAPNQAT 589
Query: 512 WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIK 571
+N +I A+CK G L++A M + P+ T +L+ G A EI+
Sbjct: 590 YNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEA----------GEIE 639
Query: 572 RKISTDGQKGIKFEH-NLV--DAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWKY 624
+ ++ + + H NLV L A K G +AV+Q+ E+ +M + +++ Y
Sbjct: 640 KAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAY 695
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/421 (20%), Positives = 166/421 (39%), Gaps = 31/421 (7%)
Query: 222 ACNAALEGCC-YGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELES 280
CN ++G C GL E++++ + G + F L Y G ++L
Sbjct: 114 TCNILVKGFCRIGLAKY--GERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVE 171
Query: 281 LMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQSDF-------SKE-- 331
M + G S +V Y++LI+G+ K G + A + ++ S F K+
Sbjct: 172 RMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDN 231
Query: 332 --------TYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGL 383
TY ++ + + GL +++ +G + D I++ G
Sbjct: 232 LNLEADLITYTTIISTYCKQ---HGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGR 288
Query: 384 SDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDA 443
+A +L EM G Y + + K EA + G+ LD+
Sbjct: 289 LSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTT 348
Query: 444 LIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDP 503
L++ S + A +FR + + + +Y ++ G + E + + L E+ E+
Sbjct: 349 LVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEM-EEK 407
Query: 504 RVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSV 563
+ ++SII+ + K G L++A +++M+ PN Y LI+GY A +
Sbjct: 408 HINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIA 467
Query: 564 LMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKVFVDKWK 623
+++E+K G+K + L D + L +G D ++++ + +D
Sbjct: 468 TDLYNEMKL-------SGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVN 520
Query: 624 Y 624
Y
Sbjct: 521 Y 521
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 137/326 (42%), Gaps = 16/326 (4%)
Query: 239 DAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLI 298
+A+ V M +G+ PN++++ + Y +G + +EL + M + ++L+
Sbjct: 570 EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLV 629
Query: 299 SGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEA-Q 357
G + G +E A + E S + + L + G AN +++ +
Sbjct: 630 VGLSEAGEIEKAMNVL--------NEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHE 681
Query: 358 KLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEH 417
+L G+ +++ +I L ++ KA S+L M G Y ++ YC+
Sbjct: 682 QLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESS 741
Query: 418 RTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYL 477
+A + + G+ ++ Y+ L+ + + LF M+E + +Y
Sbjct: 742 HVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYD 801
Query: 478 TIMTGLME-NHRPELMAAFLDEVVED--PRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRR 534
T+++G + ++ E + + + V + P KT +N +I F K G+++ A+ L
Sbjct: 802 TLISGYGKIGNKKESIRLYCEMVAQGFVP----KTSTYNVLISDFAKVGKMDQARELLNE 857
Query: 535 MIFLQFEPNDQTYLSLINGYVTAEQY 560
M P+ TY LI G+ ++
Sbjct: 858 MQVRGVPPSSSTYDILICGWCNLSKH 883
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 151/385 (39%), Gaps = 47/385 (12%)
Query: 208 ALDENLDF-MKPNIYACNAALEGCCYGLQSVSDAEKVIETMSVLGVRPNESSFGFLAYLY 266
LDE + ++P+ Y L+ C SV +A KV E M PN F L Y +
Sbjct: 189 VLDEMPKYGLEPDEYVFGCLLDALCKN-GSVKEASKVFEDMRE-KFPPNLRYFTSLLYGW 246
Query: 267 ALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCLGGGNMEQS 326
+G + E+ M E G +V +++L+SGY G + A + +M +
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM------NDMRKR 300
Query: 327 DFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISACVNLGLSDK 386
F C V K + + ++E G D +IS G+ DK
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 387 AHSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIE 446
+S+LD+M G Y+ + A+ K+ + E +L+ + G D+ Y+ +I
Sbjct: 361 GYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIR 420
Query: 447 ASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTG------LME--NHRPELMA----- 493
+ + + A L+ +M + +++ ++ G L+E NH E+++
Sbjct: 421 LACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFS 480
Query: 494 --------AFLDEVVEDPRVEVKTHDWNSI-----------------IHAFCKAGRLEDA 528
+ L+ +V D ++E+ W+ I IHA G +++A
Sbjct: 481 APQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEA 540
Query: 529 KRTLRRMIFLQFEPNDQTYLSLING 553
M+ + P TY L+ G
Sbjct: 541 CSYCLDMMEMDLMPQPNTYAKLMKG 565
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 131/302 (43%), Gaps = 16/302 (5%)
Query: 259 FGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGNLESASRTILLCL 318
F L +A + +K VE+ M ++G + L+ K G+++ AS+
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVF---- 225
Query: 319 GGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKLEPSGIVVDRSVGFGIISAC 378
E+ + + ++ G+ + G + ++++ ++ +G+ D V ++S
Sbjct: 226 -EDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQ---MKEAGLEPDIVVFTNLLSGY 281
Query: 379 VNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCK-EHRTAEATQLVMDISSSGLQLD 437
+ G A+ ++++M G + Y ++A C+ E R EA ++ +++ G + D
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 438 VGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGLMENHRPELMAAFLD 497
+ Y ALI +S+ DMR+ + + +Y+ IM + + E L
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVA---HEKKEQFEECL- 397
Query: 498 EVVEDPRVEVKTHD---WNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGY 554
E++E + D +N +I CK G +++A R M P T++ +ING+
Sbjct: 398 ELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
Query: 555 VT 556
+
Sbjct: 458 TS 459
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 103/248 (41%), Gaps = 14/248 (5%)
Query: 331 ETYCEVVKGFLQNGNVKGLANLIIEAQK--LEPSGIVVDRSVGFG-IISACVNLGLSDKA 387
E + +++ F VK ++ E K LEP V FG ++ A G +A
Sbjct: 168 ELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYV------FGCLLDALCKNGSVKEA 221
Query: 388 HSILDEMNACGCSVGLGVYVPTLKAYCKEHRTAEATQLVMDISSSGLQLDVGNYDALIEA 447
+ ++M L + L +C+E + EA ++++ + +GL+ D+ + L+
Sbjct: 222 SKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSG 280
Query: 448 SITSQDFQSAFSLFRDMREARIYDLKGSYLTIMTGL--MENHRPELMAAFLDEVVEDPRV 505
+ A+ L DMR+ Y ++ L E E M F++ +E
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVE--MERYGC 338
Query: 506 EVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQFEPNDQTYLSLINGYVTAEQYFSVLM 565
E + ++I FCK G ++ L M P+ TY+ ++ + EQ+ L
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 566 MWHEIKRK 573
+ ++KR+
Sbjct: 399 LIEKMKRR 406
>gi|255661004|gb|ACU25671.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 369
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 140/339 (41%), Gaps = 13/339 (3%)
Query: 236 SVSDAEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYS 295
++ AE+V E + V P+ + + + G E EL +M G S F +
Sbjct: 5 NIDGAERVYEDIVERKVSPDAVVYNAMLNGFYRAGRIEDCFELWEMMGREGRRSVASF-N 63
Query: 296 SLISGYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNV-KGLANLII 354
++I G +E A L G +E S +TY +V GF +N + K L L I
Sbjct: 64 TMIRVLFDNGKVEEAMSIRELMAKSGFVEDS----KTYGTLVNGFCKNRYINKSLQVLEI 119
Query: 355 EAQKLEPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYC 414
QK G V+D +I+A +KA +L+ M GC VY +K
Sbjct: 120 AEQK----GGVLDAFAYSAMINALCKEAKLEKAVCVLNGMIKSGCKPNTCVYNALIKGLV 175
Query: 415 KEHRTAEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKG 474
+ +A ++ ++ ++ D+ Y+ LI F A+ L ++M E +
Sbjct: 176 GASKLDDAIRVFHEMGTTHSPPDIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDPSVI 235
Query: 475 SYLTIMTGLMENHRPELMAAFLDEVVEDP-RVEVKTHDWNSIIHAFCKAGRLEDAKRTLR 533
+Y +M GL + E+ ++V + + +V+ H N +IH C G+ + A
Sbjct: 236 TYSLLMKGLCLGDKVEMALQLWNQVTKKGFKPDVQMH--NILIHGLCSVGKTQLALSLYL 293
Query: 534 RMIFLQFEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKR 572
M PN T +L+ G+ + L++W I R
Sbjct: 294 DMNRWNCAPNLVTQNTLMQGFYKDGNIRNALVIWARILR 332
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,561,167,346
Number of Sequences: 23463169
Number of extensions: 382894576
Number of successful extensions: 1209181
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2516
Number of HSP's successfully gapped in prelim test: 3615
Number of HSP's that attempted gapping in prelim test: 1147420
Number of HSP's gapped (non-prelim): 32833
length of query: 662
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 513
effective length of database: 8,863,183,186
effective search space: 4546812974418
effective search space used: 4546812974418
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)