Query 038802
Match_columns 532
No_of_seqs 998 out of 2552
Neff 10.8
Searched_HMMs 29240
Date Mon Mar 25 05:04:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038802.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038802hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.7E-48 6E-53 386.7 39.9 286 45-343 102-409 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 7.4E-47 2.5E-51 359.6 40.4 289 45-345 7-302 (304)
3 1got_B GT-beta; complex (GTP-b 100.0 3E-46 1E-50 361.3 43.3 284 45-342 49-340 (340)
4 3ow8_A WD repeat-containing pr 100.0 1.4E-46 4.7E-51 360.1 39.8 286 46-344 27-320 (321)
5 4gqb_B Methylosome protein 50; 100.0 2.7E-46 9.3E-51 360.8 37.1 299 36-347 16-333 (344)
6 3iz6_a 40S ribosomal protein R 100.0 1.6E-46 5.5E-51 368.9 34.1 293 45-347 60-377 (380)
7 4g56_B MGC81050 protein; prote 100.0 2.7E-46 9.3E-51 363.7 34.5 304 34-349 26-347 (357)
8 2pbi_B Guanine nucleotide-bind 100.0 3.5E-45 1.2E-49 355.6 41.5 286 45-342 58-354 (354)
9 4ery_A WD repeat-containing pr 100.0 1.2E-44 4.3E-49 345.8 41.5 289 45-344 17-311 (312)
10 3frx_A Guanine nucleotide-bind 100.0 2.2E-44 7.6E-49 344.9 40.9 287 45-346 11-318 (319)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.3E-44 1.1E-48 347.6 40.9 294 45-349 9-339 (345)
12 1erj_A Transcriptional repress 100.0 2.5E-43 8.5E-48 347.8 42.3 286 49-346 62-390 (393)
13 1nr0_A Actin interacting prote 100.0 1.8E-43 6E-48 369.0 41.1 302 34-347 129-569 (611)
14 2xzm_R RACK1; ribosome, transl 100.0 3.5E-43 1.2E-47 340.3 37.8 288 45-347 15-342 (343)
15 2hes_X YDR267CP; beta-propelle 100.0 7.6E-43 2.6E-47 335.9 39.6 287 45-345 8-328 (330)
16 1nr0_A Actin interacting prote 100.0 5.9E-43 2E-47 365.0 39.4 303 30-344 166-610 (611)
17 4aow_A Guanine nucleotide-bind 100.0 3.8E-41 1.3E-45 325.4 42.4 288 46-347 33-339 (340)
18 2ynn_A Coatomer subunit beta'; 100.0 2.3E-41 7.9E-46 321.7 39.1 257 84-349 4-263 (304)
19 3zwl_B Eukaryotic translation 100.0 5E-41 1.7E-45 328.1 40.2 291 43-347 24-348 (369)
20 1gxr_A ESG1, transducin-like e 100.0 8.8E-41 3E-45 322.3 41.3 282 47-344 47-336 (337)
21 2ymu_A WD-40 repeat protein; u 100.0 5.8E-41 2E-45 348.5 41.8 293 31-342 281-577 (577)
22 3ow8_A WD repeat-containing pr 100.0 4.5E-41 1.5E-45 321.9 35.8 263 28-303 52-320 (321)
23 1sq9_A Antiviral protein SKI8; 100.0 3.2E-41 1.1E-45 333.4 35.1 286 45-346 10-396 (397)
24 1vyh_C Platelet-activating fac 100.0 4.6E-41 1.6E-45 333.4 34.0 261 31-303 127-410 (410)
25 3dm0_A Maltose-binding peripla 100.0 3.3E-40 1.1E-44 349.9 42.2 284 46-344 377-692 (694)
26 3odt_A Protein DOA1; ubiquitin 100.0 5.6E-40 1.9E-44 313.3 39.6 284 45-349 12-300 (313)
27 4gqb_B Methylosome protein 50; 100.0 1.5E-40 5E-45 320.7 35.6 246 49-306 80-333 (344)
28 3ei3_B DNA damage-binding prot 100.0 2.7E-40 9.3E-45 325.3 36.9 283 46-345 68-382 (383)
29 2pm9_A Protein WEB1, protein t 100.0 1.7E-41 5.7E-46 337.6 27.3 307 31-346 42-415 (416)
30 1r5m_A SIR4-interacting protei 100.0 1.5E-39 5.1E-44 324.1 40.0 282 48-344 42-424 (425)
31 3i2n_A WD repeat-containing pr 100.0 3.1E-40 1.1E-44 321.2 34.1 289 46-347 13-355 (357)
32 1k8k_C P40, ARP2/3 complex 41 100.0 3.1E-40 1.1E-44 323.2 34.3 288 48-349 5-365 (372)
33 3k26_A Polycomb protein EED; W 100.0 3.6E-40 1.2E-44 321.8 33.5 289 47-345 14-366 (366)
34 2ymu_A WD-40 repeat protein; u 100.0 4.9E-39 1.7E-43 334.0 43.1 296 31-345 240-539 (577)
35 1got_B GT-beta; complex (GTP-b 100.0 2.6E-39 8.7E-44 312.7 36.6 259 30-301 73-340 (340)
36 3vl1_A 26S proteasome regulato 100.0 1.3E-39 4.6E-44 324.4 35.3 302 31-345 75-419 (420)
37 4aez_A CDC20, WD repeat-contai 100.0 7.3E-39 2.5E-43 317.0 39.9 285 47-349 87-384 (401)
38 3v7d_B Cell division control p 100.0 1.9E-38 6.6E-43 320.4 40.9 284 46-349 116-425 (464)
39 3gre_A Serine/threonine-protei 100.0 1.2E-39 4E-44 326.7 30.9 291 38-342 47-437 (437)
40 2pm9_A Protein WEB1, protein t 100.0 3E-40 1E-44 328.5 25.5 290 50-349 11-341 (416)
41 4e54_B DNA damage-binding prot 100.0 8.6E-40 2.9E-44 327.1 28.9 288 47-347 115-432 (435)
42 3frx_A Guanine nucleotide-bind 100.0 1.8E-38 6.1E-43 303.8 35.9 264 28-305 34-318 (319)
43 3dwl_C Actin-related protein 2 100.0 1.5E-40 5.1E-45 326.4 21.8 284 48-343 8-377 (377)
44 3mkq_A Coatomer beta'-subunit; 100.0 1.2E-38 4E-43 344.8 38.8 291 45-346 7-303 (814)
45 3vl1_A 26S proteasome regulato 100.0 6.2E-39 2.1E-43 319.5 33.0 285 51-347 56-367 (420)
46 3dw8_B Serine/threonine-protei 100.0 1E-38 3.6E-43 320.6 33.4 282 48-343 25-444 (447)
47 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.9E-38 9.9E-43 305.9 34.5 273 28-310 32-341 (345)
48 4gga_A P55CDC, cell division c 100.0 3.2E-37 1.1E-41 307.1 42.9 278 53-347 107-397 (420)
49 2pbi_B Guanine nucleotide-bind 100.0 3E-38 1E-42 306.7 34.2 262 29-301 81-354 (354)
50 1gxr_A ESG1, transducin-like e 100.0 2.3E-38 7.9E-43 305.3 32.8 285 50-349 8-300 (337)
51 2xzm_R RACK1; ribosome, transl 100.0 6.9E-38 2.4E-42 303.1 36.1 265 28-306 43-342 (343)
52 2pm7_B Protein transport prote 100.0 9.5E-38 3.3E-42 295.7 34.8 252 87-345 3-285 (297)
53 3iz6_a 40S ribosomal protein R 100.0 7.1E-39 2.4E-43 314.5 27.7 266 74-349 47-333 (380)
54 4a11_B DNA excision repair pro 100.0 1.5E-37 5.3E-42 307.8 37.2 305 34-349 23-369 (408)
55 3sfz_A APAF-1, apoptotic pepti 100.0 1.1E-37 3.6E-42 352.3 40.5 290 46-345 610-913 (1249)
56 2hes_X YDR267CP; beta-propelle 100.0 1.6E-37 5.3E-42 298.8 35.5 266 29-304 29-328 (330)
57 2j04_B YDR362CP, TAU91; beta p 100.0 6.7E-39 2.3E-43 324.6 27.0 283 50-346 132-518 (524)
58 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.5E-37 1.9E-41 307.9 40.7 292 30-346 135-443 (445)
59 4h5i_A Guanine nucleotide-exch 100.0 3.4E-38 1.2E-42 307.4 30.0 282 51-347 14-345 (365)
60 1yfq_A Cell cycle arrest prote 100.0 1.3E-37 4.3E-42 301.1 33.6 277 48-342 8-321 (342)
61 4g56_B MGC81050 protein; prote 100.0 4.4E-38 1.5E-42 305.8 30.3 246 48-305 91-344 (357)
62 2pm7_B Protein transport prote 100.0 2.4E-37 8.2E-42 292.9 33.7 248 46-303 4-284 (297)
63 1p22_A F-BOX/WD-repeat protein 100.0 3.5E-37 1.2E-41 308.4 35.5 275 48-349 130-418 (435)
64 4ggc_A P55CDC, cell division c 100.0 2.9E-36 9.9E-41 288.3 39.6 275 54-345 28-315 (318)
65 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.1E-36 7.2E-41 303.7 40.2 278 45-349 112-395 (445)
66 4ery_A WD repeat-containing pr 100.0 3E-36 1E-40 287.7 39.2 255 83-349 13-272 (312)
67 2oaj_A Protein SNI1; WD40 repe 100.0 3.8E-37 1.3E-41 332.9 35.7 305 30-348 35-608 (902)
68 1erj_A Transcriptional repress 100.0 1.5E-36 5E-41 299.4 36.0 247 53-305 125-390 (393)
69 3f3f_A Nucleoporin SEH1; struc 100.0 6.9E-37 2.3E-41 296.0 32.6 298 45-349 5-341 (351)
70 3v7d_B Cell division control p 100.0 9.7E-36 3.3E-40 300.6 40.6 293 30-343 138-461 (464)
71 3bg1_A Protein SEC13 homolog; 100.0 2.1E-37 7.2E-42 296.0 26.8 248 46-303 8-292 (316)
72 3bg1_A Protein SEC13 homolog; 100.0 2.4E-37 8.1E-42 295.6 26.1 252 88-345 8-293 (316)
73 3mmy_A MRNA export factor; mRN 100.0 2.5E-36 8.5E-41 294.7 33.5 284 46-344 34-345 (368)
74 1pgu_A Actin interacting prote 100.0 5.1E-36 1.7E-40 313.5 37.6 283 48-348 15-331 (615)
75 2aq5_A Coronin-1A; WD40 repeat 100.0 6.3E-37 2.1E-41 303.3 29.0 284 52-348 35-345 (402)
76 2oaj_A Protein SNI1; WD40 repe 100.0 2.8E-36 9.4E-41 326.1 36.2 301 31-343 117-659 (902)
77 3sfz_A APAF-1, apoptotic pepti 100.0 5.1E-36 1.7E-40 338.6 39.5 306 31-349 634-1078(1249)
78 1pgu_A Actin interacting prote 100.0 8.8E-36 3E-40 311.7 36.3 292 33-344 38-365 (615)
79 3dm0_A Maltose-binding peripla 100.0 1.1E-35 3.7E-40 315.2 36.3 263 28-304 399-693 (694)
80 3jrp_A Fusion protein of prote 100.0 1.4E-35 4.9E-40 290.6 32.1 256 84-347 2-289 (379)
81 4aez_A CDC20, WD repeat-contai 100.0 5.4E-35 1.8E-39 289.2 35.2 266 32-311 111-387 (401)
82 3jrp_A Fusion protein of prote 100.0 2.9E-35 9.9E-40 288.4 32.7 251 45-305 5-288 (379)
83 3mkq_A Coatomer beta'-subunit; 100.0 4.6E-35 1.6E-39 316.6 37.2 264 31-304 32-302 (814)
84 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8.6E-35 2.9E-39 292.3 36.4 282 51-346 4-392 (450)
85 4aow_A Guanine nucleotide-bind 100.0 2.8E-34 9.6E-39 277.2 37.1 257 80-349 25-290 (340)
86 3zwl_B Eukaryotic translation 100.0 8E-34 2.7E-38 277.0 38.7 254 84-349 23-308 (369)
87 3dwl_C Actin-related protein 2 100.0 2.8E-35 9.7E-40 288.7 28.0 264 30-302 29-377 (377)
88 2xyi_A Probable histone-bindin 100.0 1.6E-34 5.5E-39 288.4 33.2 251 87-346 122-411 (430)
89 1sq9_A Antiviral protein SKI8; 100.0 3.5E-35 1.2E-39 290.1 27.8 273 29-306 31-397 (397)
90 1k8k_C P40, ARP2/3 complex 41 100.0 3.6E-34 1.2E-38 280.1 33.6 245 89-345 4-274 (372)
91 4gga_A P55CDC, cell division c 100.0 5.7E-34 1.9E-38 283.6 35.3 264 32-310 123-401 (420)
92 3k26_A Polycomb protein EED; W 100.0 4.5E-35 1.5E-39 285.6 26.4 260 32-304 42-366 (366)
93 3gre_A Serine/threonine-protei 100.0 2.5E-35 8.6E-40 295.2 25.1 275 58-349 34-363 (437)
94 3i2n_A WD repeat-containing pr 100.0 3.3E-34 1.1E-38 278.6 30.8 264 33-307 43-356 (357)
95 2aq5_A Coronin-1A; WD40 repeat 100.0 4.4E-34 1.5E-38 282.8 31.1 265 30-307 53-345 (402)
96 2j04_B YDR362CP, TAU91; beta p 100.0 4.2E-35 1.4E-39 296.8 23.4 267 28-304 177-517 (524)
97 1r5m_A SIR4-interacting protei 100.0 1.6E-33 5.6E-38 280.4 33.4 261 73-347 25-363 (425)
98 2j04_A TAU60, YPL007P, hypothe 100.0 1.6E-34 5.6E-39 285.0 25.6 262 49-344 13-296 (588)
99 3vu4_A KMHSV2; beta-propeller 100.0 2.3E-33 7.7E-38 272.5 31.4 279 46-348 14-339 (355)
100 3odt_A Protein DOA1; ubiquitin 100.0 5.7E-33 1.9E-37 264.7 33.0 265 29-313 34-305 (313)
101 2xyi_A Probable histone-bindin 100.0 9.4E-34 3.2E-38 282.8 28.5 253 45-305 122-411 (430)
102 3ei3_B DNA damage-binding prot 100.0 1.9E-33 6.5E-38 276.4 30.2 257 77-349 57-343 (383)
103 4a11_B DNA excision repair pro 100.0 7.2E-33 2.5E-37 274.2 34.5 301 30-345 62-405 (408)
104 2j04_A TAU60, YPL007P, hypothe 100.0 6E-34 2.1E-38 281.0 24.7 274 30-334 33-350 (588)
105 3dw8_B Serine/threonine-protei 100.0 1.3E-33 4.3E-38 283.5 27.3 245 91-349 26-377 (447)
106 3bws_A Protein LP49; two-domai 100.0 3.4E-32 1.2E-36 272.0 37.0 278 51-344 122-431 (433)
107 3jro_A Fusion protein of prote 100.0 9.4E-34 3.2E-38 302.1 26.9 252 87-346 3-286 (753)
108 3jro_A Fusion protein of prote 100.0 1.4E-33 4.7E-38 300.9 27.3 249 46-304 4-285 (753)
109 1p22_A F-BOX/WD-repeat protein 100.0 7.1E-33 2.4E-37 277.1 30.4 270 31-324 150-434 (435)
110 4ggc_A P55CDC, cell division c 100.0 7.1E-32 2.4E-36 257.8 35.1 259 32-305 43-316 (318)
111 4e54_B DNA damage-binding prot 100.0 1.2E-33 4.2E-38 282.4 23.4 267 28-308 136-434 (435)
112 3lrv_A PRE-mRNA-splicing facto 100.0 2E-33 6.8E-38 271.8 23.7 271 57-346 42-334 (343)
113 1yfq_A Cell cycle arrest prote 100.0 1.5E-32 5E-37 265.5 29.7 245 88-349 6-286 (342)
114 4gq1_A NUP37; propeller, trans 100.0 5.3E-33 1.8E-37 273.8 24.0 244 99-344 95-388 (393)
115 4h5i_A Guanine nucleotide-exch 100.0 4.2E-32 1.4E-36 264.4 25.9 243 46-304 68-343 (365)
116 1l0q_A Surface layer protein; 100.0 4.2E-30 1.4E-34 253.2 40.2 267 65-349 4-279 (391)
117 3mmy_A MRNA export factor; mRN 100.0 2.1E-30 7E-35 252.7 31.1 261 77-349 23-308 (368)
118 1l0q_A Surface layer protein; 100.0 5.2E-29 1.8E-33 245.3 40.8 301 31-348 9-345 (391)
119 3vu4_A KMHSV2; beta-propeller 100.0 3E-30 1E-34 250.4 31.4 247 77-347 3-273 (355)
120 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.6E-30 1.2E-34 258.5 32.0 237 93-343 4-337 (450)
121 3f3f_A Nucleoporin SEH1; struc 100.0 1.9E-30 6.6E-35 250.7 25.2 269 30-310 29-343 (351)
122 2w18_A PALB2, fancn, partner a 100.0 1.6E-29 5.5E-34 234.5 30.0 274 53-343 41-355 (356)
123 3lrv_A PRE-mRNA-splicing facto 100.0 6.1E-31 2.1E-35 254.4 21.3 233 100-348 43-295 (343)
124 3bws_A Protein LP49; two-domai 100.0 7E-29 2.4E-33 247.9 36.1 285 50-349 59-394 (433)
125 4gq1_A NUP37; propeller, trans 100.0 8.2E-31 2.8E-35 258.1 21.7 241 50-302 88-387 (393)
126 2w18_A PALB2, fancn, partner a 100.0 1.3E-27 4.5E-32 221.7 27.9 254 33-302 62-355 (356)
127 1nir_A Nitrite reductase; hemo 100.0 8.4E-27 2.9E-31 237.9 33.3 280 58-349 144-462 (543)
128 1nir_A Nitrite reductase; hemo 100.0 7.2E-27 2.5E-31 238.4 32.5 303 32-349 157-518 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 4E-27 1.4E-31 233.2 26.5 280 50-347 61-389 (415)
130 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.6E-26 8.8E-31 227.3 30.1 274 35-327 94-410 (415)
131 3vgz_A Uncharacterized protein 100.0 5.6E-25 1.9E-29 213.1 37.7 273 50-336 39-335 (353)
132 3u4y_A Uncharacterized protein 99.9 1.3E-24 4.4E-29 208.8 34.5 276 57-347 3-306 (331)
133 2ecf_A Dipeptidyl peptidase IV 99.9 2.4E-25 8.3E-30 237.9 29.3 279 51-345 36-413 (741)
134 2z3z_A Dipeptidyl aminopeptida 99.9 1.2E-24 4.1E-29 231.2 32.1 281 52-347 82-437 (706)
135 2ojh_A Uncharacterized protein 99.9 5E-25 1.7E-29 207.5 25.9 253 69-336 18-293 (297)
136 1ri6_A Putative isomerase YBHE 99.9 2.7E-24 9.2E-29 207.3 31.4 269 64-345 5-308 (343)
137 1pby_B Quinohemoprotein amine 99.9 2.7E-24 9.1E-29 206.8 29.2 267 64-349 2-314 (337)
138 2ecf_A Dipeptidyl peptidase IV 99.9 1.5E-24 5E-29 231.9 27.9 280 53-346 110-460 (741)
139 1xfd_A DIP, dipeptidyl aminope 99.9 9.6E-25 3.3E-29 232.6 22.0 280 53-346 18-394 (723)
140 1ri6_A Putative isomerase YBHE 99.9 1.3E-22 4.5E-27 195.4 30.5 281 32-326 13-334 (343)
141 1k32_A Tricorn protease; prote 99.9 7.7E-23 2.6E-27 226.2 31.7 277 50-347 294-639 (1045)
142 3o4h_A Acylamino-acid-releasin 99.9 4.7E-23 1.6E-27 213.7 26.7 269 50-345 20-315 (582)
143 1jmx_B Amine dehydrogenase; ox 99.9 1.5E-22 5E-27 195.7 28.3 277 56-349 4-329 (349)
144 3hfq_A Uncharacterized protein 99.9 9.4E-22 3.2E-26 190.1 34.0 269 65-345 4-317 (347)
145 3u4y_A Uncharacterized protein 99.9 5E-22 1.7E-26 190.6 30.5 266 31-310 17-310 (331)
146 2oit_A Nucleoporin 214KDA; NH2 99.9 1.6E-22 5.5E-27 200.7 27.0 213 34-253 23-279 (434)
147 1xfd_A DIP, dipeptidyl aminope 99.9 4.5E-23 1.6E-27 219.7 24.5 291 31-334 34-429 (723)
148 1k32_A Tricorn protease; prote 99.9 9.7E-23 3.3E-27 225.3 25.8 278 46-344 198-501 (1045)
149 2ojh_A Uncharacterized protein 99.9 1.4E-22 4.8E-27 190.6 22.5 251 31-295 19-293 (297)
150 2z3z_A Dipeptidyl aminopeptida 99.9 2.1E-22 7.3E-27 213.9 26.2 287 35-347 16-393 (706)
151 1pby_B Quinohemoprotein amine 99.9 2.5E-21 8.7E-26 185.9 26.8 264 32-313 9-319 (337)
152 3vgz_A Uncharacterized protein 99.9 1.3E-20 4.3E-25 182.4 31.5 243 93-349 40-307 (353)
153 3scy_A Hypothetical bacterial 99.9 4.8E-20 1.6E-24 179.1 34.7 271 62-346 12-338 (361)
154 3hfq_A Uncharacterized protein 99.9 3.1E-20 1E-24 179.4 32.0 250 48-309 36-324 (347)
155 3pe7_A Oligogalacturonate lyas 99.9 9.4E-21 3.2E-25 186.0 28.3 289 47-346 26-383 (388)
156 1z68_A Fibroblast activation p 99.9 3E-21 1E-25 205.4 20.3 275 56-345 20-391 (719)
157 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.3E-19 7.8E-24 174.5 30.4 269 65-346 4-342 (365)
158 3scy_A Hypothetical bacterial 99.9 9.6E-19 3.3E-23 169.9 34.4 260 50-323 48-360 (361)
159 2oit_A Nucleoporin 214KDA; NH2 99.9 7.4E-20 2.5E-24 181.6 25.5 200 49-251 90-332 (434)
160 1z68_A Fibroblast activation p 99.9 1.4E-20 4.8E-25 200.3 20.4 299 32-347 34-445 (719)
161 3o4h_A Acylamino-acid-releasin 99.8 8.8E-20 3E-24 189.1 22.4 229 93-343 21-274 (582)
162 3c5m_A Oligogalacturonate lyas 99.8 1.1E-19 3.9E-24 178.7 20.6 279 50-344 34-381 (396)
163 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.9E-18 1E-22 166.7 29.5 243 51-305 39-342 (365)
164 4a5s_A Dipeptidyl peptidase 4 99.8 1.3E-18 4.4E-23 185.3 28.3 277 52-344 17-397 (740)
165 1jmx_B Amine dehydrogenase; ox 99.8 1.2E-18 4.2E-23 168.0 25.3 267 31-315 18-336 (349)
166 2oiz_A Aromatic amine dehydrog 99.8 6.9E-18 2.4E-22 163.4 29.3 271 62-349 14-340 (361)
167 2dg1_A DRP35, lactonase; beta 99.8 1.4E-17 4.9E-22 159.6 29.8 267 52-336 6-301 (333)
168 2gop_A Trilobed protease; beta 99.8 3E-17 1E-21 158.3 31.7 256 53-344 16-330 (347)
169 2oiz_A Aromatic amine dehydrog 99.8 2E-17 6.9E-22 160.1 29.6 276 33-327 30-360 (361)
170 3azo_A Aminopeptidase; POP fam 99.8 3.5E-18 1.2E-22 180.1 25.8 288 45-347 17-371 (662)
171 3fvz_A Peptidyl-glycine alpha- 99.8 7.1E-17 2.4E-21 154.4 31.1 247 94-346 24-323 (329)
172 3pe7_A Oligogalacturonate lyas 99.8 8.3E-18 2.8E-22 164.9 23.6 257 77-348 14-332 (388)
173 2z2n_A Virginiamycin B lyase; 99.8 4.3E-15 1.5E-19 139.7 40.8 280 47-346 10-296 (299)
174 1q7f_A NHL, brain tumor CG1071 99.8 2.9E-16 9.9E-21 147.0 32.5 238 92-346 28-281 (286)
175 3fvz_A Peptidyl-glycine alpha- 99.8 9.8E-17 3.4E-21 153.4 29.5 241 51-304 23-322 (329)
176 1q7f_A NHL, brain tumor CG1071 99.8 2.1E-16 7.3E-21 147.9 31.2 240 47-304 25-280 (286)
177 4a5s_A Dipeptidyl peptidase 4 99.8 1.6E-16 5.4E-21 169.2 33.6 300 33-347 35-451 (740)
178 1qks_A Cytochrome CD1 nitrite 99.8 1.2E-15 4.1E-20 155.1 35.3 273 61-346 165-478 (567)
179 3azo_A Aminopeptidase; POP fam 99.8 8.9E-17 3E-21 169.3 25.1 300 33-345 46-411 (662)
180 2xdw_A Prolyl endopeptidase; a 99.8 1.5E-15 5E-20 161.0 33.7 274 61-347 81-416 (710)
181 3c5m_A Oligogalacturonate lyas 99.7 6.1E-17 2.1E-21 159.0 20.5 256 76-348 13-332 (396)
182 1qks_A Cytochrome CD1 nitrite 99.7 8.6E-15 2.9E-19 148.9 36.1 305 33-349 176-542 (567)
183 3e5z_A Putative gluconolactona 99.7 2E-15 6.8E-20 142.1 28.8 240 85-344 19-285 (296)
184 2mad_H Methylamine dehydrogena 99.7 2.5E-14 8.7E-19 138.4 36.7 274 59-350 28-355 (373)
185 3sjl_D Methylamine dehydrogena 99.7 1.7E-15 5.7E-20 144.5 26.6 277 57-349 38-367 (386)
186 2xdw_A Prolyl endopeptidase; a 99.7 2.9E-15 9.8E-20 158.8 31.4 244 49-306 122-416 (710)
187 3e5z_A Putative gluconolactona 99.7 1.5E-15 5.1E-20 142.9 24.8 240 48-308 24-290 (296)
188 2qc5_A Streptogramin B lactona 99.7 1.7E-13 5.9E-18 128.7 39.1 278 47-343 15-298 (300)
189 3dsm_A Uncharacterized protein 99.7 8.5E-15 2.9E-19 139.8 29.0 255 52-323 44-320 (328)
190 2dg1_A DRP35, lactonase; beta 99.7 2.7E-14 9.1E-19 136.8 32.4 241 31-276 24-291 (333)
191 2bkl_A Prolyl endopeptidase; m 99.7 2E-15 6.8E-20 159.6 25.9 272 60-348 76-400 (695)
192 1rwi_B Serine/threonine-protei 99.7 6.3E-15 2.1E-19 136.5 26.1 241 95-349 25-268 (270)
193 3dsm_A Uncharacterized protein 99.7 1E-14 3.5E-19 139.2 27.2 257 71-347 15-303 (328)
194 1rwi_B Serine/threonine-protei 99.7 8.2E-15 2.8E-19 135.7 25.5 239 53-306 25-266 (270)
195 2bkl_A Prolyl endopeptidase; m 99.7 1.1E-15 3.8E-20 161.5 21.9 245 49-308 118-401 (695)
196 2gop_A Trilobed protease; beta 99.7 8E-15 2.7E-19 141.2 26.1 223 52-307 59-333 (347)
197 3no2_A Uncharacterized protein 99.7 3.3E-14 1.1E-18 131.7 26.8 231 63-312 5-260 (276)
198 3no2_A Uncharacterized protein 99.7 5.3E-14 1.8E-18 130.3 28.0 212 104-333 4-231 (276)
199 3c75_H MADH, methylamine dehyd 99.7 3.4E-14 1.2E-18 138.1 26.4 273 61-349 82-406 (426)
200 1yr2_A Prolyl oligopeptidase; 99.7 1.7E-14 6E-19 153.4 26.1 272 60-347 115-443 (741)
201 2z2n_A Virginiamycin B lyase; 99.6 2.3E-12 7.7E-17 121.0 35.6 238 91-344 12-254 (299)
202 1yr2_A Prolyl oligopeptidase; 99.6 7.4E-14 2.5E-18 148.6 27.3 244 50-307 161-444 (741)
203 3sjl_D Methylamine dehydrogena 99.6 1.8E-13 6.1E-18 130.6 26.6 255 56-325 82-384 (386)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.1E-12 3.9E-17 124.1 30.5 237 94-346 18-300 (314)
205 2mad_H Methylamine dehydrogena 99.6 4.2E-12 1.4E-16 122.8 33.8 239 56-311 70-357 (373)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.5E-12 8.6E-17 121.7 28.6 238 51-304 17-299 (314)
207 1xip_A Nucleoporin NUP159; bet 99.5 1.8E-13 6.3E-18 131.1 18.0 174 53-241 39-232 (388)
208 3hrp_A Uncharacterized protein 99.5 9.8E-12 3.3E-16 122.0 30.8 234 94-343 131-408 (409)
209 2qc5_A Streptogramin B lactona 99.5 8.2E-11 2.8E-15 110.3 35.3 237 92-344 18-259 (300)
210 3g4e_A Regucalcin; six bladed 99.5 3.5E-11 1.2E-15 112.9 32.2 227 93-335 12-262 (297)
211 3hrp_A Uncharacterized protein 99.5 1.8E-11 6.1E-16 120.1 29.8 235 51-302 130-408 (409)
212 3c75_H MADH, methylamine dehyd 99.5 4.5E-12 1.5E-16 123.2 24.5 241 56-311 122-409 (426)
213 3dr2_A Exported gluconolactona 99.5 3.1E-11 1.1E-15 113.7 27.4 230 89-339 40-301 (305)
214 2qe8_A Uncharacterized protein 99.5 1.4E-12 4.8E-17 125.2 18.2 265 52-342 17-318 (343)
215 3g4e_A Regucalcin; six bladed 99.5 3.7E-11 1.3E-15 112.7 26.6 215 53-276 14-253 (297)
216 1kb0_A Quinohemoprotein alcoho 99.5 2.1E-11 7E-16 127.4 26.7 271 63-349 77-511 (677)
217 2ghs_A AGR_C_1268P; regucalcin 99.4 5.2E-10 1.8E-14 106.3 32.9 221 96-336 51-293 (326)
218 1yiq_A Quinohemoprotein alcoho 99.4 5.9E-11 2E-15 124.2 28.3 271 63-349 70-509 (689)
219 3q7m_A Lipoprotein YFGL, BAMB; 99.4 2.8E-10 9.7E-15 110.6 31.3 264 63-349 53-341 (376)
220 2hz6_A Endoplasmic reticulum t 99.4 2.9E-15 9.8E-20 145.3 -4.4 259 62-345 8-279 (369)
221 1xip_A Nucleoporin NUP159; bet 99.4 3.6E-12 1.2E-16 122.1 16.6 164 95-275 39-224 (388)
222 1mda_H Methylamine dehydrogena 99.4 7.6E-12 2.6E-16 119.6 18.8 246 56-324 69-366 (368)
223 1mda_H Methylamine dehydrogena 99.4 7.4E-12 2.5E-16 119.7 18.7 252 74-349 47-350 (368)
224 3iuj_A Prolyl endopeptidase; h 99.4 3.8E-11 1.3E-15 126.5 25.2 243 48-308 125-409 (693)
225 3dr2_A Exported gluconolactona 99.4 5E-11 1.7E-15 112.3 23.5 234 45-298 38-301 (305)
226 3q7m_A Lipoprotein YFGL, BAMB; 99.4 2.6E-10 8.8E-15 110.9 27.1 258 63-342 103-375 (376)
227 3iuj_A Prolyl endopeptidase; h 99.4 9E-11 3.1E-15 123.6 25.1 240 92-347 127-407 (693)
228 2ghs_A AGR_C_1268P; regucalcin 99.4 9.6E-10 3.3E-14 104.5 28.8 212 54-276 51-283 (326)
229 1kb0_A Quinohemoprotein alcoho 99.3 5E-10 1.7E-14 117.0 28.7 255 63-331 128-536 (677)
230 1yiq_A Quinohemoprotein alcoho 99.3 3E-10 1E-14 118.9 26.9 254 63-330 121-533 (689)
231 3hxj_A Pyrrolo-quinoline quino 99.3 8.3E-11 2.8E-15 112.0 19.0 266 52-347 60-326 (330)
232 1npe_A Nidogen, entactin; glyc 99.3 2.9E-08 1E-12 91.2 34.7 249 64-327 2-263 (267)
233 2hz6_A Endoplasmic reticulum t 99.2 2.4E-12 8E-17 124.7 3.6 225 104-347 8-238 (369)
234 2ece_A 462AA long hypothetical 99.2 1E-08 3.5E-13 98.5 28.2 219 103-333 93-399 (462)
235 1kv9_A Type II quinohemoprotei 99.2 3E-09 1E-13 111.0 26.3 271 63-349 66-492 (668)
236 1fwx_A Nitrous oxide reductase 99.2 1.5E-09 5.2E-14 107.8 22.2 230 104-347 100-433 (595)
237 3hxj_A Pyrrolo-quinoline quino 99.2 1.9E-10 6.5E-15 109.5 15.3 258 56-343 24-282 (330)
238 2ece_A 462AA long hypothetical 99.2 1.6E-08 5.6E-13 97.1 26.2 220 61-292 93-399 (462)
239 2qe8_A Uncharacterized protein 99.1 4.2E-09 1.4E-13 100.8 20.7 226 49-300 64-317 (343)
240 1w6s_A Methanol dehydrogenase 99.1 6.8E-08 2.3E-12 98.6 28.3 281 63-349 62-507 (599)
241 2ad6_A Methanol dehydrogenase 99.1 5.4E-08 1.8E-12 99.4 27.2 270 63-349 62-498 (571)
242 1npe_A Nidogen, entactin; glyc 99.1 3E-07 1E-11 84.4 29.5 231 106-349 2-242 (267)
243 4a2l_A BT_4663, two-component 99.1 1.3E-06 4.5E-11 93.5 38.1 274 54-346 175-481 (795)
244 4a2l_A BT_4663, two-component 99.0 2.5E-06 8.5E-11 91.4 39.4 275 51-346 214-527 (795)
245 2iwa_A Glutamine cyclotransfer 99.0 2.1E-07 7.2E-12 84.0 25.7 205 84-305 10-238 (266)
246 1kv9_A Type II quinohemoprotei 99.0 3.2E-07 1.1E-11 95.7 29.2 257 63-333 117-520 (668)
247 2iwa_A Glutamine cyclotransfer 99.0 3E-07 1E-11 82.9 24.6 204 126-347 10-239 (266)
248 3v9f_A Two-component system se 99.0 1.5E-06 5E-11 93.0 33.5 277 51-346 257-569 (781)
249 1flg_A Protein (quinoprotein e 99.0 4E-07 1.4E-11 93.1 27.7 273 63-349 68-520 (582)
250 1fwx_A Nitrous oxide reductase 98.9 9.9E-08 3.4E-12 95.0 22.1 232 61-306 99-433 (595)
251 1w6s_A Methanol dehydrogenase 98.9 4.6E-07 1.6E-11 92.5 27.6 260 57-332 111-534 (599)
252 1flg_A Protein (quinoprotein e 98.9 7.4E-07 2.5E-11 91.1 29.1 254 63-330 117-544 (582)
253 2ad6_A Methanol dehydrogenase 98.9 2.5E-07 8.5E-12 94.5 23.9 253 63-330 115-522 (571)
254 2fp8_A Strictosidine synthase; 98.9 2.6E-06 9E-11 80.4 28.4 233 95-346 20-314 (322)
255 3v9f_A Two-component system se 98.9 1E-05 3.5E-10 86.4 36.0 274 52-346 211-525 (781)
256 2p4o_A Hypothetical protein; p 98.9 4.6E-06 1.6E-10 78.1 29.6 216 52-275 32-268 (306)
257 3v64_C Agrin; beta propeller, 98.9 1.3E-05 4.4E-10 76.5 32.8 246 51-311 33-282 (349)
258 3nol_A Glutamine cyclotransfer 98.9 9E-07 3.1E-11 78.8 22.5 188 127-334 33-244 (262)
259 2p4o_A Hypothetical protein; p 98.8 2.5E-06 8.5E-11 79.9 27.0 226 94-336 32-279 (306)
260 3nol_A Glutamine cyclotransfer 98.8 1.4E-06 4.8E-11 77.6 23.4 183 84-276 32-236 (262)
261 3v65_B Low-density lipoprotein 98.8 1.6E-05 5.6E-10 76.9 31.8 245 53-312 78-326 (386)
262 2fp8_A Strictosidine synthase; 98.8 5.4E-06 1.9E-10 78.2 27.7 235 52-304 19-313 (322)
263 3nok_A Glutaminyl cyclase; bet 98.8 9.3E-07 3.2E-11 78.7 20.4 187 126-333 44-253 (268)
264 3qqz_A Putative uncharacterize 98.8 4.9E-06 1.7E-10 74.6 24.7 202 45-249 20-250 (255)
265 3v64_C Agrin; beta propeller, 98.7 3.6E-05 1.2E-09 73.3 31.8 238 96-347 36-277 (349)
266 1ijq_A LDL receptor, low-densi 98.7 7.2E-05 2.5E-09 70.2 33.3 234 65-311 3-245 (316)
267 3mbr_X Glutamine cyclotransfer 98.7 8.9E-06 3E-10 71.8 24.9 183 84-276 10-215 (243)
268 1k3i_A Galactose oxidase precu 98.7 1.5E-06 5.1E-11 90.8 23.4 267 56-334 190-530 (656)
269 3nok_A Glutaminyl cyclase; bet 98.7 1.4E-06 4.6E-11 77.6 19.3 179 54-241 57-253 (268)
270 3v65_B Low-density lipoprotein 98.7 3.5E-05 1.2E-09 74.6 31.0 237 97-347 80-320 (386)
271 3mbr_X Glutamine cyclotransfer 98.7 1.4E-05 4.8E-10 70.5 24.7 181 53-241 22-222 (243)
272 1ijq_A LDL receptor, low-densi 98.7 0.00013 4.4E-09 68.5 32.6 229 107-348 3-241 (316)
273 3p5b_L Low density lipoprotein 98.6 0.00017 5.7E-09 70.1 33.7 235 65-312 85-328 (400)
274 2xe4_A Oligopeptidase B; hydro 98.6 8.6E-06 2.9E-10 86.3 26.5 191 53-250 175-398 (751)
275 2xbg_A YCF48-like protein; pho 98.6 0.00026 9E-09 66.7 33.6 279 37-342 25-319 (327)
276 3qqz_A Putative uncharacterize 98.6 9.4E-05 3.2E-09 66.2 28.4 202 130-343 21-251 (255)
277 3tc9_A Hypothetical hydrolase; 98.6 4E-05 1.4E-09 75.3 27.9 244 95-343 138-428 (430)
278 3sov_A LRP-6, low-density lipo 98.6 0.00013 4.4E-09 68.4 29.3 233 65-312 6-246 (318)
279 4hw6_A Hypothetical protein, I 98.5 6E-05 2.1E-09 74.0 26.4 236 95-343 140-431 (433)
280 2xe4_A Oligopeptidase B; hydro 98.5 6.3E-06 2.1E-10 87.4 20.2 237 95-347 175-460 (751)
281 3p5b_L Low density lipoprotein 98.5 0.00045 1.5E-08 67.1 31.4 230 107-349 85-324 (400)
282 3tc9_A Hypothetical hydrolase; 98.5 0.00015 5E-09 71.2 28.0 154 53-210 138-301 (430)
283 1bpo_A Protein (clathrin); cla 98.4 0.0012 4.2E-08 62.5 36.9 309 73-422 48-387 (494)
284 4hw6_A Hypothetical protein, I 98.4 0.00025 8.6E-09 69.6 27.4 196 52-250 139-372 (433)
285 3m0c_C LDL receptor, low-densi 98.4 0.00052 1.8E-08 72.3 31.3 233 65-311 397-639 (791)
286 3kya_A Putative phosphatase; s 98.3 0.00098 3.3E-08 65.6 29.7 249 96-349 141-479 (496)
287 3sov_A LRP-6, low-density lipo 98.3 0.00043 1.5E-08 64.8 26.0 223 114-348 12-241 (318)
288 1k3i_A Galactose oxidase precu 98.3 3.3E-05 1.1E-09 80.6 20.3 239 98-347 190-499 (656)
289 2xbg_A YCF48-like protein; pho 98.3 0.0019 6.6E-08 60.7 30.3 228 51-301 79-319 (327)
290 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0033 1.1E-07 64.6 32.9 227 65-306 8-239 (628)
291 3amr_A 3-phytase; beta-propell 98.2 0.00067 2.3E-08 63.1 24.3 184 62-251 39-262 (355)
292 3m0c_C LDL receptor, low-densi 98.2 0.0031 1.1E-07 66.4 32.0 229 107-348 397-635 (791)
293 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0028 9.5E-08 65.2 30.2 229 107-348 8-240 (628)
294 3s94_A LRP-6, low-density lipo 98.2 0.004 1.4E-07 64.0 31.2 286 52-347 84-425 (619)
295 3kya_A Putative phosphatase; s 98.1 0.0037 1.2E-07 61.6 29.1 155 53-210 140-341 (496)
296 3amr_A 3-phytase; beta-propell 98.1 0.0026 9E-08 59.1 26.3 196 104-312 39-272 (355)
297 3ei3_A DNA damage-binding prot 98.1 0.023 7.9E-07 62.6 38.3 284 51-347 553-915 (1158)
298 1n7d_A LDL receptor, low-densi 98.1 1.3E-05 4.5E-10 83.8 11.1 240 71-323 384-634 (699)
299 2ism_A Putative oxidoreductase 98.0 0.0079 2.7E-07 57.1 28.4 223 94-333 31-333 (352)
300 3ei3_A DNA damage-binding prot 98.0 0.031 1.1E-06 61.6 36.6 175 159-346 808-1000(1158)
301 2ism_A Putative oxidoreductase 98.0 0.0031 1.1E-07 59.9 25.3 219 51-276 30-326 (352)
302 2p9w_A MAL S 1 allergenic prot 98.0 0.0015 5.3E-08 60.1 21.9 153 55-210 16-215 (334)
303 3s94_A LRP-6, low-density lipo 98.0 0.0045 1.5E-07 63.6 27.6 227 69-307 14-246 (619)
304 3ott_A Two-component system se 98.0 0.02 6.8E-07 60.7 33.6 265 51-341 21-303 (758)
305 1xi4_A Clathrin heavy chain; a 98.0 0.0022 7.4E-08 70.0 25.0 310 72-422 47-387 (1630)
306 2vpj_A Kelch-like protein 12; 97.9 0.0038 1.3E-07 57.8 23.1 214 73-306 31-280 (301)
307 2vpj_A Kelch-like protein 12; 97.8 0.0041 1.4E-07 57.6 22.3 223 104-346 14-279 (301)
308 1n7d_A LDL receptor, low-densi 97.8 6.1E-05 2.1E-09 78.7 10.2 220 52-273 406-634 (699)
309 2p9w_A MAL S 1 allergenic prot 97.8 0.0019 6.5E-08 59.5 18.7 159 177-346 11-216 (334)
310 2xzh_A Clathrin heavy chain 1; 97.8 0.021 7.3E-07 52.1 35.2 257 73-349 49-336 (365)
311 2xn4_A Kelch-like protein 2; s 97.7 0.0056 1.9E-07 56.7 21.5 215 73-307 30-279 (302)
312 2xn4_A Kelch-like protein 2; s 97.7 0.0087 3E-07 55.4 22.6 223 105-346 16-277 (302)
313 3ott_A Two-component system se 97.7 0.086 2.9E-06 55.8 37.9 273 53-346 192-503 (758)
314 3a9g_A Putative uncharacterize 97.6 0.033 1.1E-06 52.8 25.6 216 52-276 29-323 (354)
315 2g8s_A Glucose/sorbosone dehyd 97.6 0.045 1.5E-06 51.8 28.1 240 94-343 18-350 (353)
316 3ii7_A Kelch-like protein 7; p 97.6 0.02 6.7E-07 53.1 23.6 223 105-346 12-273 (306)
317 3ii7_A Kelch-like protein 7; p 97.6 0.017 5.8E-07 53.5 23.0 222 65-306 14-274 (306)
318 3sbq_A Nitrous-oxide reductase 97.6 0.064 2.2E-06 52.7 25.8 255 66-333 73-453 (638)
319 3a9g_A Putative uncharacterize 97.6 0.06 2E-06 51.0 30.8 234 94-333 29-330 (354)
320 3pbp_A Nucleoporin NUP82; beta 97.5 0.0082 2.8E-07 57.0 18.6 144 190-341 31-208 (452)
321 1zgk_A Kelch-like ECH-associat 97.4 0.028 9.4E-07 52.1 21.7 225 62-307 24-290 (308)
322 1zgk_A Kelch-like ECH-associat 97.4 0.023 8E-07 52.6 20.6 223 104-346 24-288 (308)
323 4asc_A Kelch repeat and BTB do 97.3 0.061 2.1E-06 49.9 22.5 209 107-335 7-253 (315)
324 2g8s_A Glucose/sorbosone dehyd 97.3 0.14 4.7E-06 48.4 24.6 217 52-276 18-334 (353)
325 3sre_A PON1, serum paraoxonase 97.1 0.19 6.4E-06 47.3 23.8 186 137-335 51-287 (355)
326 4asc_A Kelch repeat and BTB do 97.1 0.049 1.7E-06 50.6 19.0 176 58-241 41-251 (315)
327 2uvk_A YJHT; unknown function, 97.0 0.055 1.9E-06 51.3 19.6 229 104-349 19-346 (357)
328 2be1_A Serine/threonine-protei 97.0 0.15 5.2E-06 47.5 21.1 201 106-318 11-246 (339)
329 2woz_A Kelch repeat and BTB do 97.0 0.17 5.8E-06 46.9 21.8 209 107-335 18-263 (318)
330 1bpo_A Protein (clathrin); cla 96.9 0.35 1.2E-05 46.2 32.1 207 54-267 68-303 (494)
331 2xzh_A Clathrin heavy chain 1; 96.8 0.28 9.6E-06 44.9 31.6 233 55-303 70-331 (365)
332 2be1_A Serine/threonine-protei 96.7 0.24 8.1E-06 46.1 19.9 192 64-258 11-236 (339)
333 3pbp_A Nucleoporin NUP82; beta 96.6 0.13 4.3E-06 49.0 17.6 144 59-206 28-208 (452)
334 2zwa_A Leucine carboxyl methyl 96.6 0.22 7.5E-06 51.9 21.1 220 103-334 396-674 (695)
335 1tl2_A L10, protein (tachylect 96.4 0.2 6.7E-06 43.1 15.7 170 63-243 4-201 (236)
336 2uvk_A YJHT; unknown function, 96.4 0.14 4.7E-06 48.4 16.9 232 62-311 19-349 (357)
337 3sre_A PON1, serum paraoxonase 96.4 0.67 2.3E-05 43.5 25.8 192 53-250 51-296 (355)
338 1cru_A Protein (soluble quinop 96.4 0.86 2.9E-05 44.6 30.3 104 94-198 27-162 (454)
339 3b7f_A Glycosyl hydrolase, BNR 96.3 0.82 2.8E-05 43.8 27.0 206 65-275 24-288 (394)
340 3das_A Putative oxidoreductase 96.2 0.8 2.7E-05 42.8 27.8 221 49-276 29-319 (347)
341 3b7f_A Glycosyl hydrolase, BNR 96.2 0.94 3.2E-05 43.3 25.6 152 51-206 54-258 (394)
342 1xi4_A Clathrin heavy chain; a 96.1 0.33 1.1E-05 53.5 19.3 237 56-308 70-335 (1630)
343 2woz_A Kelch repeat and BTB do 96.1 0.87 3E-05 42.0 24.4 174 74-253 25-232 (318)
344 1tl2_A L10, protein (tachylect 96.1 0.14 4.6E-06 44.1 13.0 140 53-202 42-202 (236)
345 1k8k_G P16, ARP2/3 complex 16 95.8 0.026 8.8E-07 44.7 7.0 87 398-485 37-137 (151)
346 3s25_A Hypothetical 7-bladed b 95.8 1.1 3.8E-05 41.0 21.5 176 56-253 57-256 (302)
347 3s25_A Hypothetical 7-bladed b 95.8 1.2 4E-05 40.8 27.5 238 61-339 23-287 (302)
348 1cru_A Protein (soluble quinop 95.7 1.7 5.8E-05 42.4 25.8 104 51-156 26-163 (454)
349 3dwl_G Actin-related protein 2 95.5 0.039 1.3E-06 43.6 6.8 85 400-485 40-138 (152)
350 3das_A Putative oxidoreductase 95.3 1.8 6.3E-05 40.3 30.7 229 93-333 31-326 (347)
351 2zwa_A Leucine carboxyl methyl 95.1 1.4 4.7E-05 45.9 19.5 191 61-253 396-636 (695)
352 3qhy_B Beta-lactamase inhibito 95.0 2 6.7E-05 38.9 18.1 223 53-305 25-247 (282)
353 3qhy_B Beta-lactamase inhibito 94.9 2.1 7E-05 38.7 17.7 222 95-346 25-247 (282)
354 3sbq_A Nitrous-oxide reductase 92.7 8.6 0.00029 38.1 21.1 229 107-346 72-409 (638)
355 1suu_A DNA gyrase subunit A; t 91.0 9.3 0.00032 35.0 22.6 187 147-345 7-231 (312)
356 1wp5_A Topoisomerase IV; broke 88.7 14 0.00049 33.9 24.0 188 61-252 3-225 (323)
357 4hvt_A Ritya.17583.B, post-pro 88.6 25 0.00085 36.4 26.6 237 53-303 130-429 (711)
358 1zi0_A DNA gyrase subunit A; b 88.3 15 0.00051 33.5 27.6 231 61-304 1-277 (307)
359 3l6v_A GYRA, DNA gyrase subuni 87.4 19 0.00065 33.8 27.8 170 59-232 3-209 (370)
360 1suu_A DNA gyrase subunit A; t 86.9 18 0.00062 33.0 27.3 189 60-252 5-231 (312)
361 1sqj_A OXG-RCBH, oligoxylogluc 86.7 34 0.0012 36.0 23.9 148 51-200 14-190 (789)
362 2wg3_C Hedgehog-interacting pr 86.5 25 0.00085 34.2 32.0 235 94-333 14-354 (463)
363 3uc1_A DNA gyrase subunit A; D 85.9 21 0.00072 32.8 24.6 231 63-304 3-279 (327)
364 3kci_A Probable E3 ubiquitin-p 85.5 25 0.00085 33.2 29.6 228 105-349 62-349 (389)
365 3no0_A DNA gyrase subunit A; D 83.4 24 0.00083 31.4 24.1 198 93-304 23-246 (276)
366 3no0_A DNA gyrase subunit A; D 82.3 27 0.00092 31.2 22.2 196 136-344 24-245 (276)
367 4gq2_M Nucleoporin NUP120; bet 82.1 59 0.002 35.0 20.1 37 137-174 237-273 (950)
368 1wp5_A Topoisomerase IV; broke 81.9 31 0.0011 31.6 20.7 186 147-344 4-224 (323)
369 1sqj_A OXG-RCBH, oligoxylogluc 81.0 58 0.002 34.2 25.4 109 93-203 14-145 (789)
370 4hvt_A Ritya.17583.B, post-pro 80.5 57 0.0019 33.7 22.0 233 97-344 132-429 (711)
371 3uc1_A DNA gyrase subunit A; D 77.8 43 0.0015 30.7 24.1 197 51-251 41-278 (327)
372 4gq2_M Nucleoporin NUP120; bet 77.4 32 0.0011 37.1 14.2 38 95-132 237-274 (950)
373 3s6n_2 SurviVal of motor neuro 77.4 3.5 0.00012 36.8 5.6 48 441-488 179-226 (280)
374 3mvd_K Regulator of chromosome 76.6 53 0.0018 31.2 33.4 231 95-348 76-377 (423)
375 2cn3_A Xyloglucanase, beta-1,4 76.4 76 0.0026 32.9 25.8 117 37-157 11-153 (737)
376 2vxg_A LD41624, GE-1, CG6181-P 76.4 25 0.00087 27.4 12.0 99 402-509 6-108 (139)
377 1zvt_A Topoisomerase IV subuni 76.3 40 0.0014 29.6 14.8 143 192-345 3-163 (256)
378 2wg3_C Hedgehog-interacting pr 73.2 70 0.0024 31.0 26.6 105 52-157 14-159 (463)
379 4d9s_A UVB-resistance protein 69.3 78 0.0027 29.9 36.4 273 53-348 17-360 (406)
380 3kci_A Probable E3 ubiquitin-p 66.9 85 0.0029 29.4 28.9 226 63-304 62-345 (389)
381 4a9v_A PHOX; hydrolase, beta-p 64.0 39 0.0013 33.7 10.0 62 51-112 475-549 (592)
382 3zwu_A Alkaline phosphatase PH 58.7 35 0.0012 34.2 8.9 59 52-111 476-548 (592)
383 3q6k_A 43.2 kDa salivary prote 56.6 1.3E+02 0.0044 28.2 22.6 155 116-304 124-306 (381)
384 4fhn_B Nucleoporin NUP120; pro 56.1 41 0.0014 37.2 9.8 38 95-132 239-276 (1139)
385 4fhn_B Nucleoporin NUP120; pro 53.5 38 0.0013 37.4 9.0 37 138-175 240-276 (1139)
386 1zi0_A DNA gyrase subunit A; b 49.0 1.5E+02 0.0051 26.7 26.4 230 103-344 1-276 (307)
387 3of7_A Regulator of chromosome 48.2 2E+02 0.0067 27.8 25.1 147 94-251 148-340 (473)
388 3f7f_A Nucleoporin NUP120; nuc 47.8 30 0.001 35.5 6.4 37 137-176 223-259 (729)
389 3zwu_A Alkaline phosphatase PH 43.3 77 0.0026 31.8 8.5 58 182-240 479-548 (592)
390 1zvt_A Topoisomerase IV subuni 42.2 1.7E+02 0.0059 25.4 16.6 143 64-210 3-163 (256)
391 3f7f_A Nucleoporin NUP120; nuc 40.7 57 0.002 33.5 7.1 38 52-91 222-259 (729)
392 1q47_A Semaphorin 3A; beta pro 40.3 1.2E+02 0.0041 29.6 9.3 56 285-340 421-487 (495)
393 3l6v_A GYRA, DNA gyrase subuni 39.9 2.3E+02 0.008 26.3 27.8 240 102-344 4-315 (370)
394 3a0f_A Xyloglucanase; beta-pro 38.9 3.5E+02 0.012 28.0 28.1 151 49-201 18-203 (763)
395 4a9v_A PHOX; hydrolase, beta-p 35.8 1.5E+02 0.0052 29.5 9.1 61 180-241 477-549 (592)
396 3al9_A Plexin-A2; beta-propell 33.7 1.2E+02 0.004 30.1 8.1 56 285-340 413-476 (539)
397 4d9s_A UVB-resistance protein 32.2 3.2E+02 0.011 25.6 31.3 191 136-346 68-306 (406)
398 3vmx_A Voltage-gated hydrogen 30.3 60 0.002 19.8 3.2 26 497-522 22-47 (48)
399 3q6k_A 43.2 kDa salivary prote 28.9 3.6E+02 0.012 25.1 24.2 190 50-241 85-342 (381)
400 3of7_A Regulator of chromosome 26.9 4.3E+02 0.015 25.3 29.3 192 136-348 148-408 (473)
401 3b2a_A TON_1937, putative unch 26.1 2.8E+02 0.0094 24.0 7.8 21 400-420 9-29 (265)
402 3lpz_A GET4 (YOR164C homolog); 26.0 3.8E+02 0.013 24.5 10.0 98 403-503 42-147 (336)
403 1zvu_A Topoisomerase IV subuni 25.9 5.5E+02 0.019 26.3 11.4 147 188-344 470-632 (716)
404 1juq_A ADP-ribosylation factor 25.7 2.6E+02 0.009 22.5 8.6 27 414-440 53-82 (171)
405 3mvd_K Regulator of chromosome 25.4 4.2E+02 0.014 24.8 32.0 229 53-304 76-374 (423)
406 3mez_B Mannose-specific lectin 25.1 2.1E+02 0.007 21.1 9.3 25 98-124 60-84 (113)
407 2cn3_A Xyloglucanase, beta-1,4 24.4 5.9E+02 0.02 26.1 26.0 105 95-200 24-153 (737)
408 4gz8_A Semaphorin-3A; multi-do 23.2 1.8E+02 0.0063 29.6 7.5 55 286-340 430-495 (667)
409 1a12_A RCC1, regulator of chro 20.6 5.2E+02 0.018 24.1 33.6 230 94-347 59-367 (413)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-48 Score=386.69 Aligned_cols=286 Identities=23% Similarity=0.388 Sum_probs=268.8
Q ss_pred CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC
Q 038802 45 HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS 124 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 124 (532)
..+.+|.++|++++|+|+++++++|+.||.|++||+.+++....+.+|.+.|++++|+|++++|++|+.||+|++||+.+
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEE
Q 038802 125 RTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVK 204 (532)
Q Consensus 125 ~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~ 204 (532)
++++..+.+|...|.+++|+| ++.++++|+.|++|++||++++.++..+.+|...|.++.++| ++.++++|+.|++|+
T Consensus 182 ~~~~~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 182 FECIRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVR 259 (410)
T ss_dssp SCEEECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEE
T ss_pred CceeEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCeEE
Confidence 999999999999999999999 899999999999999999999999999999999999999999 999999999999999
Q ss_pred EEEcccCCceeEEEecCCCcEEEEEEecC--------------------CCEEEEEc-CCeEEEEEccCCCeeeEEccCC
Q 038802 205 LWDVRVENSKSVMEVNHGKPIEDVMFLPS--------------------GGLIATAG-GNSVKIWDLIGGGKMVYSMESH 263 (532)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~v~~i~~~~~--------------------~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~ 263 (532)
+||++++.....+. .|...|.+++|+|+ +.++++++ |+.|++||++++ .++..+.+|
T Consensus 260 vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~-~~~~~~~~h 337 (410)
T 1vyh_C 260 VWVVATKECKAELR-EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGH 337 (410)
T ss_dssp EEETTTCCEEEEEC-CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT-EEEEEEECC
T ss_pred EEECCCCceeeEec-CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC-ceEEEEECC
Confidence 99999866555443 78999999999996 66899988 999999999887 888899999
Q ss_pred CcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEe
Q 038802 264 NKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGR 342 (532)
Q Consensus 264 ~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~ 342 (532)
...|.+++|+|+ +.+|++|+.||.|++||+.+++++..+. |...|++++|+|++.+|++|+.||.|++|+
T Consensus 338 ~~~v~~v~~~~~---------g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 338 DNWVRGVLFHSG---------GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp SSCEEEEEECSS---------SSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred CCcEEEEEEcCC---------CCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 999999999998 6789999999999999999998888887 888999999999999999999999999998
Q ss_pred e
Q 038802 343 R 343 (532)
Q Consensus 343 ~ 343 (532)
.
T Consensus 409 ~ 409 (410)
T 1vyh_C 409 C 409 (410)
T ss_dssp -
T ss_pred C
Confidence 6
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.4e-47 Score=359.56 Aligned_cols=289 Identities=20% Similarity=0.300 Sum_probs=263.2
Q ss_pred CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC
Q 038802 45 HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS 124 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 124 (532)
.++.+|.+.|++++|+|+++++++++.||.|++||+.++.....+..|..+|.+++|+|++++|++|+.|++|++||+.+
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~ 86 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT 86 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC-eEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeE
Q 038802 125 RTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE-SVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTV 203 (532)
Q Consensus 125 ~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i 203 (532)
++.+..+.+|...|.+++|+| ++.++++|+.|++|++||++++ .....+.+|...|.+++|+|.++..|++|+.|++|
T Consensus 87 ~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v 165 (304)
T 2ynn_A 87 GEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (304)
T ss_dssp CCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred CcEEEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 999999999999999999999 8999999999999999999877 55677889999999999999667899999999999
Q ss_pred EEEEcccCCceeEEEecCCCcEEEEEEec--CCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCC
Q 038802 204 KLWDVRVENSKSVMEVNHGKPIEDVMFLP--SGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESG 280 (532)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 280 (532)
++||+++..........+...+..+.|+| ++.++++++ |+.|++||++++ .++..+.+|...|.+++|+|+
T Consensus 166 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~-~~~~~~~~h~~~v~~~~~~p~----- 239 (304)
T 2ynn_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK-SCVATLEGHMSNVSFAVFHPT----- 239 (304)
T ss_dssp EEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT-EEEEEEECCSSCEEEEEECSS-----
T ss_pred EEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC-ccceeeCCCCCCEEEEEECCC-----
Confidence 99999887766666667778999999987 678999998 999999999887 889999999999999999999
Q ss_pred ccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCC--EEEEEecCCcEEEEeecC
Q 038802 281 EEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCM--TRVIGTSNGTIFAGRRKK 345 (532)
Q Consensus 281 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~--~l~~g~~dg~i~iw~~~~ 345 (532)
+.+|++|+.||.|++||+.++++...+. +...+++++|+|++. ++++|+.| .+.+|++..
T Consensus 240 ----~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 240 ----LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp ----SSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred ----CCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence 6799999999999999999999999887 667999999999875 56776655 577777654
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3e-46 Score=361.26 Aligned_cols=284 Identities=21% Similarity=0.353 Sum_probs=259.2
Q ss_pred CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC
Q 038802 45 HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS 124 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 124 (532)
.++.+|.++|++++|+|+++++++|+.||.|++||..+++....+..|...|.+++|+|++++|++|+.|+.|++|++.+
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~ 128 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECcc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred C----ceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCC
Q 038802 125 R----TPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYD 200 (532)
Q Consensus 125 ~----~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~d 200 (532)
+ .....+.+|.+.|.++.|++ ++ .+++++.|++|++||+.+++.+..+.+|...|.+++|+| ++.++++|+.|
T Consensus 129 ~~~~~~~~~~~~~h~~~v~~~~~~~-~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sg~~d 205 (340)
T 1got_B 129 REGNVRVSRELAGHTGYLSCCRFLD-DN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLFVSGACD 205 (340)
T ss_dssp CSBSCEEEEEEECCSSCEEEEEEEE-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETT
T ss_pred CCCcceeEEEecCCCccEEEEEECC-CC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC-CCCEEEEEeCC
Confidence 5 35667889999999999997 55 499999999999999999999999999999999999999 99999999999
Q ss_pred CeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEcc--CCCcceEEEEEeccCC
Q 038802 201 HTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSME--SHNKTVTSVCVGRVGN 277 (532)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~--~~~~~i~~~~~~~~~~ 277 (532)
|+|++||++++.....+. .|...|.+++|+|++.++++++ |+.|++||+++. ..+..+. .+...|.+++|+|+
T Consensus 206 ~~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~~~~~~~v~~~~~s~~-- 281 (340)
T 1got_B 206 ASAKLWDVREGMCRQTFT-GHESDINAICFFPNGNAFATGSDDATCRLFDLRAD-QELMTYSHDNIICGITSVSFSKS-- 281 (340)
T ss_dssp SCEEEEETTTCSEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCTTCCSCEEEEEECTT--
T ss_pred CcEEEEECCCCeeEEEEc-CCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC-cEEEEEccCCcccceEEEEECCC--
Confidence 999999999866555443 7899999999999999999999 999999999887 5555543 23457999999999
Q ss_pred CCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEe
Q 038802 278 ESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGR 342 (532)
Q Consensus 278 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~ 342 (532)
+.++++|+.||.|++||+.+++.+..+. |..+|.+++|+|+|.+|++|+.||.|++|+
T Consensus 282 -------g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 282 -------GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp -------SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred -------CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 6899999999999999999998888876 889999999999999999999999999996
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-46 Score=360.14 Aligned_cols=286 Identities=16% Similarity=0.249 Sum_probs=262.6
Q ss_pred ccCccccCeeEEEEcCC----CCeEEEEEeCCeEEEEeCCCceE--EEEeeccCceeEEEEEccCCCEEEEEcCCCCEEE
Q 038802 46 QIPGLVSSINSIVFSPT----TSHLFAATHSASLTLFSSQTLEK--HSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQV 119 (532)
Q Consensus 46 ~~~~h~~~V~~i~~sp~----~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~i 119 (532)
.+.+|.++|++++|+|+ +.+|++|+.|+.|++|+..++.. ...+.+|...|.+++|++++.++++|+.|++|++
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~l 106 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 106 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence 45789999999999985 56899999999999999876653 4568899999999999999999999999999999
Q ss_pred EECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeC
Q 038802 120 FDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSY 199 (532)
Q Consensus 120 wd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~ 199 (532)
||+.+++.+..+..|...+.+++|+| ++.+|++|+.||.|++||+++++....+..|...|.+++|+| ++++|++|+.
T Consensus 107 Wd~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~lasg~~ 184 (321)
T 3ow8_A 107 WDLENGKQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP-DGKYLASGAI 184 (321)
T ss_dssp EETTTTEEEEEEECCTTCCCCEEECT-TSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECT-TSSEEEEEET
T ss_pred EECCCCCEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECC-CCCEEEEEcC
Confidence 99999999999999999999999999 999999999999999999999999999999999999999999 9999999999
Q ss_pred CCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCC
Q 038802 200 DHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNE 278 (532)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 278 (532)
||.|++||+++++....+. .|..+|.+++|+|++.+|++++ |+.|++||+++. .....+.+|...|.+++|+|+
T Consensus 185 dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~sp~--- 259 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA-NLAGTLSGHASWVLNVAFCPD--- 259 (321)
T ss_dssp TSCEEEEETTTTEEEEEEC-CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTT---
T ss_pred CCeEEEEECCCCcEEEEEc-ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc-ceeEEEcCCCCceEEEEECCC---
Confidence 9999999999865544443 7889999999999999999999 899999999887 778889999999999999999
Q ss_pred CCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEeec
Q 038802 279 SGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRK 344 (532)
Q Consensus 279 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~ 344 (532)
+.+|++++.||.|++||+.+++++..+. |...|++++|+|+|.+|++++.||.|++||..
T Consensus 260 ------~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 260 ------DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ------SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred ------CCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 6789999999999999999999998886 88899999999999999999999999999964
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.7e-46 Score=360.84 Aligned_cols=299 Identities=18% Similarity=0.203 Sum_probs=243.1
Q ss_pred cccccccCCCccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCC-----------CceEEEEeeccCceeEEEEEccC
Q 038802 36 SKYWSSFKPHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQ-----------TLEKHSAISSFKDVVTCSSFRPD 104 (532)
Q Consensus 36 ~~~w~~~~~~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~ 104 (532)
.+.|+. .+.....|...|.+++|+|||++|++++ |+++++||.. ..........+...|.+++|+|+
T Consensus 16 ~r~w~~-~~~~~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d 93 (344)
T 4gqb_B 16 AREWNL-PPNAPACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE 93 (344)
T ss_dssp --------CCSCSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT
T ss_pred ccccCC-CCCCcccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC
Confidence 455652 2333456778899999999999888776 6677777621 11111222345678999999998
Q ss_pred CCEEEEEcCCCCEEEEECCCCceEEE----ecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCc
Q 038802 105 GSLLAASDLSGLIQVFDVKSRTPLRR----LKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDY 180 (532)
Q Consensus 105 ~~~l~~g~~dg~i~iwd~~~~~~~~~----~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 180 (532)
+ .|++|+.||+|+|||+.+++.+.. ..+|.+.|++++|+| ++.+|++|+.|++|++||+++++++..+.+|.+.
T Consensus 94 ~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~ 171 (344)
T 4gqb_B 94 R-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQ 171 (344)
T ss_dssp T-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred C-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCc
Confidence 6 688999999999999998876543 348999999999999 9999999999999999999999999999999999
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEe-cCCCcEEEEEEecC-CCEEEEEc-CCeEEEEEccCCCeee
Q 038802 181 VRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEV-NHGKPIEDVMFLPS-GGLIATAG-GNSVKIWDLIGGGKMV 257 (532)
Q Consensus 181 v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~i~~~~~-~~~l~~~~-d~~i~iwd~~~~~~~~ 257 (532)
|.+++|+|.+..+|++|+.|++|++||+++++....+.. .+...+.+++|+|+ +.++++++ |+.|++||++++ +++
T Consensus 172 V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~-~~~ 250 (344)
T 4gqb_B 172 VTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST-SCV 250 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---CC
T ss_pred eEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC-cEE
Confidence 999999994446899999999999999998766555432 45667999999994 56888887 899999999987 788
Q ss_pred EEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecCCCeeEEEEecCCC-EEEEEecCC
Q 038802 258 YSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCM-TRVIGTSNG 336 (532)
Q Consensus 258 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~g~~dg 336 (532)
..+.+|...|++++|+|++ ..+|++|+.||+|+|||+.++++.....|.+.|++++|+|+++ +|++|+.||
T Consensus 251 ~~~~~h~~~v~~v~fsp~g--------~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~ 322 (344)
T 4gqb_B 251 LSSAVHSQCVTGLVFSPHS--------VPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDH 322 (344)
T ss_dssp EEEECCSSCEEEEEECSSS--------SCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred EEEcCCCCCEEEEEEccCC--------CeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCC
Confidence 8999999999999999985 4689999999999999999999887777999999999999986 577899999
Q ss_pred cEEEEeecCcc
Q 038802 337 TIFAGRRKKKE 347 (532)
Q Consensus 337 ~i~iw~~~~~~ 347 (532)
.|++|++.++.
T Consensus 323 ~v~~w~v~~~~ 333 (344)
T 4gqb_B 323 QVVHHVVPTEP 333 (344)
T ss_dssp CEEEEECCC--
T ss_pred eEEEEECCCCC
Confidence 99999998653
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.6e-46 Score=368.93 Aligned_cols=293 Identities=21% Similarity=0.322 Sum_probs=260.7
Q ss_pred CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC
Q 038802 45 HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS 124 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 124 (532)
..+.+|.++|++++|+|++++|++|+.|+.|+|||..+++....+..|...|.+++|+|+|++|++|+.|+.|++||+.+
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~ 139 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSS 139 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCC
T ss_pred ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred Cc-------eEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec-----cCCCCceEEEEEeCCCCC
Q 038802 125 RT-------PLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL-----FGHKDYVRCGDCSPVNGD 192 (532)
Q Consensus 125 ~~-------~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~i~~~~~~~~ 192 (532)
.. ....+.+|.+.|.++.|.|.++..|++|+.|++|++||+.+++.+..+ .+|...|.++++++.+++
T Consensus 140 ~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 219 (380)
T 3iz6_a 140 QADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNAN 219 (380)
T ss_dssp CSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCC
T ss_pred CccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCC
Confidence 32 345678999999999999955778999999999999999999988776 679999999999887889
Q ss_pred EEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCC-------
Q 038802 193 MFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHN------- 264 (532)
Q Consensus 193 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~------- 264 (532)
+|++|+.||+|++||++..........+|...|.+++|+|++.+|++++ |++|++||++++ ..+..+..+.
T Consensus 220 ~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~-~~~~~~~~~~~~~~~~~ 298 (380)
T 3iz6_a 220 MFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG-HQLQVYNREPDRNDNEL 298 (380)
T ss_dssp EEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT-EEEEEECCCCSSSCCSS
T ss_pred EEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC-cEEEEeccccccccccc
Confidence 9999999999999999854333334448999999999999999999999 999999999987 6666554432
Q ss_pred cceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEee-----ecCCCeeEEEEecCCCEEEEEecCCcEE
Q 038802 265 KTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSM-----RFPAPLMSVAFSPDCMTRVIGTSNGTIF 339 (532)
Q Consensus 265 ~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~g~~dg~i~ 339 (532)
..|++++|+|+ +.++++|+.||.|++||+.+++....+ .|.+.|++++|+|+|.+|++|+.||.|+
T Consensus 299 ~~v~~~~~s~~---------g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~ 369 (380)
T 3iz6_a 299 PIVTSVAFSIS---------GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLK 369 (380)
T ss_dssp CSCSEEEECSS---------SSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEE
T ss_pred CceEEEEECCC---------CCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEE
Confidence 34899999999 689999999999999999998887766 3778999999999999999999999999
Q ss_pred EEeecCcc
Q 038802 340 AGRRKKKE 347 (532)
Q Consensus 340 iw~~~~~~ 347 (532)
+|++....
T Consensus 370 iW~~~~~~ 377 (380)
T 3iz6_a 370 IWAFSGHR 377 (380)
T ss_dssp EEECCSSS
T ss_pred EEecCCCc
Confidence 99987653
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.7e-46 Score=363.66 Aligned_cols=304 Identities=17% Similarity=0.246 Sum_probs=244.7
Q ss_pred CCcccccccCCCccCccccCeeEEEEcCCCCeEEEEEe------CCeEEEEeCCCceEE----EEeeccCceeEEEEEcc
Q 038802 34 PESKYWSSFKPHQIPGLVSSINSIVFSPTTSHLFAATH------SASLTLFSSQTLEKH----SAISSFKDVVTCSSFRP 103 (532)
Q Consensus 34 ~~~~~w~~~~~~~~~~h~~~V~~i~~sp~~~~l~~~~~------d~~v~i~~~~~~~~~----~~~~~~~~~v~~~~~~~ 103 (532)
.....|+. .+....+|...|++++|+|||++|++|+. |+.|++|+..++... .....|...|++++|+|
T Consensus 26 ~~~~~w~~-p~~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~ 104 (357)
T 4g56_B 26 SKGSAWGR-PVTAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVS 104 (357)
T ss_dssp ---------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEET
T ss_pred ccccccCC-CCCCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcC
Confidence 34456653 33445679999999999999999999997 788999998776543 33456888999999999
Q ss_pred CCCEEEEEcCCCCEEEEECCCCceEE----EecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCC
Q 038802 104 DGSLLAASDLSGLIQVFDVKSRTPLR----RLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKD 179 (532)
Q Consensus 104 ~~~~l~~g~~dg~i~iwd~~~~~~~~----~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 179 (532)
++.++ +++.||+|++||+.+++... ...+|...|.+++|+| ++.+|++|+.|++|++||+++++.+..+.+|..
T Consensus 105 d~~~l-~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~ 182 (357)
T 4g56_B 105 EKGIL-VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSS 182 (357)
T ss_dssp TTEEE-EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCCEE-EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCC
Confidence 98655 56679999999998876443 3447999999999999 999999999999999999999999999999999
Q ss_pred ceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEe-cCCCcEEEEEEecC-CCEEEEEc-CCeEEEEEccCCCee
Q 038802 180 YVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEV-NHGKPIEDVMFLPS-GGLIATAG-GNSVKIWDLIGGGKM 256 (532)
Q Consensus 180 ~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~i~~~~~-~~~l~~~~-d~~i~iwd~~~~~~~ 256 (532)
.|++++|+|....++++++.||+|++||+++++....... .+...+.+++|+|+ +.++++++ |+.|++||++++ ++
T Consensus 183 ~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~-~~ 261 (357)
T 4g56_B 183 EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP-DS 261 (357)
T ss_dssp CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG-GG
T ss_pred CEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCC-cE
Confidence 9999999994446899999999999999998766554433 56778999999997 46788887 899999999887 77
Q ss_pred eEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecCCCeeEEEEec-CCCEEEEEecC
Q 038802 257 VYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSP-DCMTRVIGTSN 335 (532)
Q Consensus 257 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~g~~d 335 (532)
+..+.+|...|++++|+|++ ..+|++|+.||+|+|||+.+++++..+.|.+.|++++|+| ++.+|++|+.|
T Consensus 262 ~~~~~~~~~~v~~l~~sp~~--------~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~D 333 (357)
T 4g56_B 262 AQTSAVHSQNITGLAYSYHS--------SPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWD 333 (357)
T ss_dssp CEEECCCSSCEEEEEECSSS--------SCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred eEEEeccceeEEEEEEcCCC--------CCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCC
Confidence 88899999999999999985 5689999999999999999999999989999999999998 79999999999
Q ss_pred CcEEEEeecCcccc
Q 038802 336 GTIFAGRRKKKENV 349 (532)
Q Consensus 336 g~i~iw~~~~~~~~ 349 (532)
|.|++|++.+..+.
T Consensus 334 g~v~iW~~~~~~~~ 347 (357)
T 4g56_B 334 HKVLHHHLPSEGRT 347 (357)
T ss_dssp SCEEEEECC-----
T ss_pred CeEEEEECCCCCcc
Confidence 99999999876443
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.5e-45 Score=355.59 Aligned_cols=286 Identities=19% Similarity=0.312 Sum_probs=258.8
Q ss_pred CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC
Q 038802 45 HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS 124 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 124 (532)
..+.+|.++|++++|+|++++|++|+.||.|++||..+++....+..|...|.+++|+|+|.++++|+.|+.+++|++..
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~ 137 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTF 137 (354)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCC
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEec
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred C------ceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCC-CCCEEEEE
Q 038802 125 R------TPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPV-NGDMFVTG 197 (532)
Q Consensus 125 ~------~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~l~s~ 197 (532)
. .....+.+|...|.+++|+| ++..|++++.|++|++||+++++.+..+.+|...|.+++++|. ++++|++|
T Consensus 138 ~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 138 DKNENMAAKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp CTTCCSGGGCEEEEECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEE
T ss_pred cccccccccceeeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEE
Confidence 3 34566778999999999999 8889999999999999999999999999999999999999884 36899999
Q ss_pred eCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccC--CCcceEEEEEec
Q 038802 198 SYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMES--HNKTVTSVCVGR 274 (532)
Q Consensus 198 s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~--~~~~i~~~~~~~ 274 (532)
+.||+|++||+++++....+. .|...|.+++|+|++.++++++ |++|++||++.. ..+..+.. +...+.+++|+|
T Consensus 217 s~Dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~-~~~~~~~~~~~~~~~~~~~~s~ 294 (354)
T 2pbi_B 217 GCDKKAMVWDMRSGQCVQAFE-THESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD-REVAIYSKESIIFGASSVDFSL 294 (354)
T ss_dssp ETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCTTCCSCEEEEEECT
T ss_pred eCCCeEEEEECCCCcEEEEec-CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC-cEEEEEcCCCcccceeEEEEeC
Confidence 999999999999876555443 7899999999999999999999 999999999876 55555443 345789999999
Q ss_pred cCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEe
Q 038802 275 VGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGR 342 (532)
Q Consensus 275 ~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~ 342 (532)
+ +.++++|+.|+.|++||+.+++.+..+. |...|++++|+|+|++|++|+.||.|++|+
T Consensus 295 ~---------g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 295 S---------GRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp T---------SSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred C---------CCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9 6899999999999999999988887775 889999999999999999999999999995
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.2e-44 Score=345.80 Aligned_cols=289 Identities=21% Similarity=0.341 Sum_probs=264.2
Q ss_pred CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC
Q 038802 45 HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS 124 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 124 (532)
..+.+|.++|++++|+|+++++++++.||.|++|+..+++....+.+|...|.+++|+|++++|++|+.||.|++||+.+
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEE
Q 038802 125 RTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVK 204 (532)
Q Consensus 125 ~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~ 204 (532)
++.+..+.+|...|.+++|+| ++.++++|+.|+.|++||+++++.+..+..|..+|.+++|+| ++.++++|+.||.|+
T Consensus 97 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~ 174 (312)
T 4ery_A 97 GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCR 174 (312)
T ss_dssp CCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEE
T ss_pred CcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC-CCCEEEEEeCCCcEE
Confidence 999999999999999999999 899999999999999999999999999999999999999999 999999999999999
Q ss_pred EEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEE--EEEeccCCCCCc
Q 038802 205 LWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTS--VCVGRVGNESGE 281 (532)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~ 281 (532)
+||+++++........+..++.+++|+|+++++++++ |+.|++||+.++ +.+..+.+|.....+ ..+++.+
T Consensus 175 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----- 248 (312)
T 4ery_A 175 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTG----- 248 (312)
T ss_dssp EEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT-EEEEEECSSCCSSSCCCEEEECSS-----
T ss_pred EEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC-cEEEEEEecCCceEEEEEEEEeCC-----
Confidence 9999987666665556778899999999999999998 999999999887 778888888765433 3444332
Q ss_pred cccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEe--cCCcEEEEeec
Q 038802 282 EAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGT--SNGTIFAGRRK 344 (532)
Q Consensus 282 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~--~dg~i~iw~~~ 344 (532)
+.++++|+.||.|++||+.+++.+..+. |...|.+++|+|++.++++++ .||.|++|+.+
T Consensus 249 ---~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 249 ---GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp ---SCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred ---CcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 6789999999999999999999998887 788999999999999999987 69999999864
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.2e-44 Score=344.87 Aligned_cols=287 Identities=20% Similarity=0.339 Sum_probs=252.0
Q ss_pred CccCccccCeeEEEEcCCC-CeEEEEEeCCeEEEEeCCC-----ceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEE
Q 038802 45 HQIPGLVSSINSIVFSPTT-SHLFAATHSASLTLFSSQT-----LEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQ 118 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~-~~l~~~~~d~~v~i~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~ 118 (532)
.++.+|.++|++++|+|++ ++|++|+.|+.|++|++.. +.....+.+|...|.+++|+|++++|++|+.||+|+
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~ 90 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLR 90 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEE
Confidence 3578999999999999975 7999999999999999753 345678899999999999999999999999999999
Q ss_pred EEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCC-----CCCE
Q 038802 119 VFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPV-----NGDM 193 (532)
Q Consensus 119 iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~-----~~~~ 193 (532)
+||+.+++.+..+.+|...|.+++|+| ++.++++|+.|++|++||++ +.++..+.+|...|.++.++|. ++..
T Consensus 91 ~wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 91 LWDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCE
T ss_pred EEECCCCCeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 999999999999999999999999999 89999999999999999996 5677788899999999999983 2348
Q ss_pred EEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEE
Q 038802 194 FVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCV 272 (532)
Q Consensus 194 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~ 272 (532)
+++++.|++|++||+++......+ .+|...|.+++|+|++++|++++ |+.|++||+.+. +.+..+.. ...|.+++|
T Consensus 169 l~s~~~d~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~-~~~~~~~~-~~~v~~~~~ 245 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQIEADF-IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK-KAMYTLSA-QDEVFSLAF 245 (319)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEE-CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTT-EEEEEEEC-CSCEEEEEE
T ss_pred EEEEeCCCEEEEEECCcchhheee-cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-cEEEEecC-CCcEEEEEE
Confidence 999999999999999875443333 37999999999999999999998 999999999887 77777765 467999999
Q ss_pred eccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee---------cCCCeeEEEEecCCCEEEEEecCCcEEEEee
Q 038802 273 GRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR---------FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRR 343 (532)
Q Consensus 273 ~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~ 343 (532)
+|+ +.++++++ ++.+++|++.....+..+. +...+.+++|+|||++|++|+.||.|++|++
T Consensus 246 sp~---------~~~la~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 246 SPN---------RYWLAAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp CSS---------SSEEEEEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred cCC---------CCEEEEEc-CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEE
Confidence 999 56677666 4569999999888776653 3457899999999999999999999999999
Q ss_pred cCc
Q 038802 344 KKK 346 (532)
Q Consensus 344 ~~~ 346 (532)
.+.
T Consensus 316 ~t~ 318 (319)
T 3frx_A 316 MTA 318 (319)
T ss_dssp EEC
T ss_pred eec
Confidence 764
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-44 Score=347.59 Aligned_cols=294 Identities=18% Similarity=0.275 Sum_probs=248.8
Q ss_pred CccCcccc-CeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEE---EeeccCceeEEEEEccCCCEEEEEcCCCCEEEE
Q 038802 45 HQIPGLVS-SINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHS---AISSFKDVVTCSSFRPDGSLLAASDLSGLIQVF 120 (532)
Q Consensus 45 ~~~~~h~~-~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iw 120 (532)
.++.+|.+ .|.+++|+|+|++|++|+.|+.|+|||..++.... ...+|...|.+++|+|++++|++|+.|++|++|
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIW 88 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEE
Confidence 35678888 99999999999999999999999999998775432 236799999999999999999999999999999
Q ss_pred ECCCC--ceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC---eEEEeccCCCCceEEEEEeCCCCCEEE
Q 038802 121 DVKSR--TPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE---SVVLDLFGHKDYVRCGDCSPVNGDMFV 195 (532)
Q Consensus 121 d~~~~--~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~---~~~~~~~~~~~~v~~i~~~~~~~~~l~ 195 (532)
|+..+ +++..+.+|...|.+++|+| ++.+|++|+.|++|++||+.++ .++..+.+|...|.+++|+| ++.+|+
T Consensus 89 ~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~ 166 (345)
T 3fm0_A 89 KKNQDDFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP-SQELLA 166 (345)
T ss_dssp EECCC-EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS-SSSCEE
T ss_pred EccCCCeEEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC-CCCEEE
Confidence 99876 45778899999999999999 9999999999999999999875 45667789999999999999 999999
Q ss_pred EEeCCCeEEEEEcccCCceeEE-EecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCC--------------eeeEE
Q 038802 196 TGSYDHTVKLWDVRVENSKSVM-EVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGG--------------KMVYS 259 (532)
Q Consensus 196 s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~--------------~~~~~ 259 (532)
+|+.|++|++||.+........ ..+|...|.+++|+|+|++|++++ |++|++||..... .++..
T Consensus 167 s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (345)
T 3fm0_A 167 SASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICT 246 (345)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEE
T ss_pred EEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEE
Confidence 9999999999999875433332 337899999999999999999999 9999999974321 23344
Q ss_pred ccC-CCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCce--------EE-Eee-ecCCCeeEEEEecCC-C
Q 038802 260 MES-HNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMK--------VT-HSM-RFPAPLMSVAFSPDC-M 327 (532)
Q Consensus 260 ~~~-~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--------~~-~~~-~~~~~v~~~~~s~~~-~ 327 (532)
+.+ |...|.+++|+|+ +..+++++.|+.|++|+..... .. +.. .|...|++++|+|++ .
T Consensus 247 ~~~~h~~~v~~v~~~~~---------~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 317 (345)
T 3fm0_A 247 LSGFHSRTIYDIAWCQL---------TGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPG 317 (345)
T ss_dssp ECSSCSSCEEEEEECTT---------TCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTT
T ss_pred ecCCCCCcEEEEEEecC---------CCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCce
Confidence 444 8889999999998 5789999999999999986532 11 122 377899999999998 5
Q ss_pred EEEEEecCCcEEEEeecCcccc
Q 038802 328 TRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 328 ~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+|++|+.||.|++|+..+++..
T Consensus 318 ~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 318 LLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp EEEEEETTSCEEEEEECC----
T ss_pred EEEEcCCCCcEEEEEecCCCCc
Confidence 9999999999999999887654
No 12
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.5e-43 Score=347.82 Aligned_cols=286 Identities=22% Similarity=0.312 Sum_probs=252.9
Q ss_pred ccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCc------------------eeEEEEEccCCCEEEE
Q 038802 49 GLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKD------------------VVTCSSFRPDGSLLAA 110 (532)
Q Consensus 49 ~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~ 110 (532)
+|.+.|++++|+|+|++|++|+ ++.+++|++.+++....+..|.. .|.+++|+|+|++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999876 68999999999988887765532 4999999999999999
Q ss_pred EcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCC
Q 038802 111 SDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVN 190 (532)
Q Consensus 111 g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~ 190 (532)
|+.||.|++||+.+++.+..+.+|...|.+++|+| ++.+|++|+.|++|++||++++++...+. +...+.+++|+|.+
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGD 218 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTT
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCC
Confidence 99999999999999999999999999999999999 89999999999999999999999887775 56789999999978
Q ss_pred CCEEEEEeCCCeEEEEEcccCCceeEEE------ecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCC----------
Q 038802 191 GDMFVTGSYDHTVKLWDVRVENSKSVME------VNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGG---------- 253 (532)
Q Consensus 191 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~------~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~---------- 253 (532)
+.++++|+.||.|++||++++....... .+|...|.+++|+|++.+|++++ |+.|++||+++.
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~ 298 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 298 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCC
Confidence 8999999999999999998865544432 36889999999999999999999 999999998753
Q ss_pred -CeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEec------C
Q 038802 254 -GKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSP------D 325 (532)
Q Consensus 254 -~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~------~ 325 (532)
..+...+.+|...|.+++|+|+ +.+|++|+.||.|++||+.+++.+..+. |...|.+++|++ +
T Consensus 299 ~~~~~~~~~~h~~~v~~~~~~~~---------~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~ 369 (393)
T 1erj_A 299 SGTCEVTYIGHKDFVLSVATTQN---------DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPE 369 (393)
T ss_dssp --CEEEEEECCSSCEEEEEECGG---------GCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTT
T ss_pred CCcceEEEecccCcEEEEEECCC---------CCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCC
Confidence 1345667789999999999998 6799999999999999999999988887 888999999886 6
Q ss_pred CCEEEEEecCCcEEEEeecCc
Q 038802 326 CMTRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 326 ~~~l~~g~~dg~i~iw~~~~~ 346 (532)
+.+|++|+.||.|++|++.+.
T Consensus 370 ~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 370 YNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp CEEEEEEETTSEEEEEEEEEC
T ss_pred CCEEEEECCCCcEEECccccc
Confidence 889999999999999998643
No 13
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.8e-43 Score=368.98 Aligned_cols=302 Identities=19% Similarity=0.319 Sum_probs=260.7
Q ss_pred CCcccccccC-CCccCccccCeeEEEEcCCCC-eEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEE
Q 038802 34 PESKYWSSFK-PHQIPGLVSSINSIVFSPTTS-HLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAAS 111 (532)
Q Consensus 34 ~~~~~w~~~~-~~~~~~h~~~V~~i~~sp~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g 111 (532)
+.+.+|+.-. ...+.+|.+.|++++|+|+++ .+++|+.|+.|++||..+++....+.+|.+.|++++|+|+|++|++|
T Consensus 129 ~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~ 208 (611)
T 1nr0_A 129 GHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAST 208 (611)
T ss_dssp EEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred eEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEE
Confidence 4577888433 245789999999999999987 59999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEECCCCceEEEec-------CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEE------------
Q 038802 112 DLSGLIQVFDVKSRTPLRRLK-------SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVL------------ 172 (532)
Q Consensus 112 ~~dg~i~iwd~~~~~~~~~~~-------~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~------------ 172 (532)
+.||+|++||+.+++.+..+. +|.+.|.+++|+| ++.+|++++.|++|++||+.+++.+.
T Consensus 209 s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~ 287 (611)
T 1nr0_A 209 GGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQ 287 (611)
T ss_dssp ETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCE
T ss_pred ECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCcccee
Confidence 999999999999999888884 7999999999999 99999999999999999998876543
Q ss_pred -------------------------------eccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEE----
Q 038802 173 -------------------------------DLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVM---- 217 (532)
Q Consensus 173 -------------------------------~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---- 217 (532)
.+.+|...|++++|+| ++++|++++.|++|++||+.++......
T Consensus 288 ~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h 366 (611)
T 1nr0_A 288 LGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVH 366 (611)
T ss_dssp EEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSC
T ss_pred EEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeeecccCC
Confidence 3357999999999999 9999999999999999998754321100
Q ss_pred -----------------------------------------------------------------------------Eec
Q 038802 218 -----------------------------------------------------------------------------EVN 220 (532)
Q Consensus 218 -----------------------------------------------------------------------------~~~ 220 (532)
...
T Consensus 367 ~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~ 446 (611)
T 1nr0_A 367 ATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVP 446 (611)
T ss_dssp SSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEE
T ss_pred cceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeee
Confidence 011
Q ss_pred CCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCe-eeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEE
Q 038802 221 HGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGK-MVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMK 298 (532)
Q Consensus 221 ~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~ 298 (532)
|...+.+++|+|+|+++++++ |+.|++||+.+... .... .+|...|++++|+|+ +.+|++++.|+.|+
T Consensus 447 ~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspd---------g~~las~s~d~~v~ 516 (611)
T 1nr0_A 447 ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNN---------GAFLVATDQSRKVI 516 (611)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTT---------SSEEEEEETTSCEE
T ss_pred cCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCC---------CCEEEEEcCCCCEE
Confidence 234578999999999999999 89999999987521 2333 679999999999999 68999999999999
Q ss_pred EEECCC-ceEEEe--ee-cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcc
Q 038802 299 VFDYGK-MKVTHS--MR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKE 347 (532)
Q Consensus 299 iwd~~~-~~~~~~--~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~ 347 (532)
+||+.+ +++... +. |...|++++|+|||++|++|+.||.|++|++.+..
T Consensus 517 ~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 517 PYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp EEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred EEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence 999988 666554 33 88899999999999999999999999999998754
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.5e-43 Score=340.31 Aligned_cols=288 Identities=18% Similarity=0.303 Sum_probs=243.6
Q ss_pred CccCccccCeeEEEE-----cC-CCCeEEEEEeCCeEEEEeCCC-------ceEEEEeeccCceeEEEEEccCCCEEEEE
Q 038802 45 HQIPGLVSSINSIVF-----SP-TTSHLFAATHSASLTLFSSQT-------LEKHSAISSFKDVVTCSSFRPDGSLLAAS 111 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~-----sp-~~~~l~~~~~d~~v~i~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~g 111 (532)
..+.+|.+.|++++| ++ ++++|++|+.|+.|++||+.+ +.....+.+|...|.+++|+|++.++++|
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~ 94 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISS 94 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEE
Confidence 457899999999999 76 899999999999999999864 34567789999999999999999999999
Q ss_pred cCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec--cCCCCceEEEEEeCC
Q 038802 112 DLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL--FGHKDYVRCGDCSPV 189 (532)
Q Consensus 112 ~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~v~~i~~~~~ 189 (532)
+.||+|++||+.+++.+..+.+|...|.+++|+| ++.+|++|+.|++|++||+......... .+|...|.+++|+|
T Consensus 95 s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~- 172 (343)
T 2xzm_R 95 SWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSP- 172 (343)
T ss_dssp ETTSEEEEEETTSSCEEEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECC-
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecc-
Confidence 9999999999999999999999999999999999 8999999999999999999854333222 37899999999999
Q ss_pred CC----------CEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeE
Q 038802 190 NG----------DMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVY 258 (532)
Q Consensus 190 ~~----------~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~ 258 (532)
++ .++++++.||+|++||... ........|...|.+++|+|+|++|++++ |+.|++||+........
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~ 250 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWNTNF--QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR 250 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEETTT--EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEcCCC--ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce
Confidence 54 7899999999999999543 33333347899999999999999999999 99999999965434444
Q ss_pred EccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEE--ee------------ecCCCeeEEEEec
Q 038802 259 SMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTH--SM------------RFPAPLMSVAFSP 324 (532)
Q Consensus 259 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~------------~~~~~v~~~~~s~ 324 (532)
.+ .+...|.+++|+|+ +.++ +++.|+.|++||+.+++... .+ .|...|.+++|+|
T Consensus 251 ~~-~~~~~v~~v~~sp~---------~~~l-a~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 319 (343)
T 2xzm_R 251 EF-DAGSTINQIAFNPK---------LQWV-AVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNA 319 (343)
T ss_dssp EE-ECSSCEEEEEECSS---------SCEE-EEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECS
T ss_pred ee-cCCCcEEEEEECCC---------CCEE-EEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECC
Confidence 44 24557999999998 4455 56678899999998765432 22 2556799999999
Q ss_pred CCCEEEEEecCCcEEEEeecCcc
Q 038802 325 DCMTRVIGTSNGTIFAGRRKKKE 347 (532)
Q Consensus 325 ~~~~l~~g~~dg~i~iw~~~~~~ 347 (532)
+|++|++|+.||.|++|++.+++
T Consensus 320 ~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 320 LGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp SSCCEEEEETTSEEEEEEEEEEE
T ss_pred CCCeEEEecCCceEEEEEEEccC
Confidence 99999999999999999987653
No 15
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-43 Score=335.88 Aligned_cols=287 Identities=19% Similarity=0.239 Sum_probs=234.9
Q ss_pred CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCc--eEEEEe-ec-cCceeEEEEEccCCCEEEEEcCCCCEEEE
Q 038802 45 HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTL--EKHSAI-SS-FKDVVTCSSFRPDGSLLAASDLSGLIQVF 120 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~~g~~dg~i~iw 120 (532)
..+.+|.++|++++|+|+ +|++|+.|+.|++||+.++ .....+ .. |...|.+++|+|++++|++|+.|++|++|
T Consensus 8 ~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw 85 (330)
T 2hes_X 8 KSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIW 85 (330)
T ss_dssp EEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 356799999999999998 8999999999999999874 445555 34 99999999999999999999999999999
Q ss_pred ECCC-------CceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCC----CeEEEeccCCCCceEEEEEeCC
Q 038802 121 DVKS-------RTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAG----ESVVLDLFGHKDYVRCGDCSPV 189 (532)
Q Consensus 121 d~~~-------~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~----~~~~~~~~~~~~~v~~i~~~~~ 189 (532)
|+.. .+.+..+.+|...|.+++|+| ++.+|++|+.|++|++||++. .+++..+.+|...|.+++|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p- 163 (330)
T 2hes_X 86 AKEESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP- 163 (330)
T ss_dssp EC-------CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS-
T ss_pred EcccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC-
Confidence 9843 356778899999999999999 899999999999999999943 256778899999999999999
Q ss_pred CCCEEEEEeCCCeEEEEEcccCCceeEE-EecCCCcEEEEEEecC--CCEEEEEc-CCeEEEEEccCCC-------eeeE
Q 038802 190 NGDMFVTGSYDHTVKLWDVRVENSKSVM-EVNHGKPIEDVMFLPS--GGLIATAG-GNSVKIWDLIGGG-------KMVY 258 (532)
Q Consensus 190 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~v~~i~~~~~--~~~l~~~~-d~~i~iwd~~~~~-------~~~~ 258 (532)
++.+|++|+.|++|++||..++...... ..+|...|.+++|+|+ +..+++++ |++|++||+.... .+..
T Consensus 164 ~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 243 (330)
T 2hes_X 164 SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEA 243 (330)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEee
Confidence 9999999999999999998765322222 2379999999999998 67888888 9999999987531 2344
Q ss_pred EccC-CCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCce--EEEee--ecCC-CeeEEEEec--CCCEEE
Q 038802 259 SMES-HNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMK--VTHSM--RFPA-PLMSVAFSP--DCMTRV 330 (532)
Q Consensus 259 ~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~--~~~~-~v~~~~~s~--~~~~l~ 330 (532)
.+.. |...|.+++|+++ .++++++.||.|++||..+++ ..... .|.. .|.+++|+| ++++|+
T Consensus 244 ~~~~~h~~~v~~v~~s~~----------~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~la 313 (330)
T 2hes_X 244 ILPDVHKRQVYNVAWGFN----------GLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILA 313 (330)
T ss_dssp ECCSCCSSCEEEEEECTT----------SCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEE
T ss_pred ecccccccceEEEEEcCC----------CEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEE
Confidence 5554 8999999999965 379999999999999998764 33332 2555 899999999 789999
Q ss_pred EEecCCcEEEEeecC
Q 038802 331 IGTSNGTIFAGRRKK 345 (532)
Q Consensus 331 ~g~~dg~i~iw~~~~ 345 (532)
+|+.||.|++|++.+
T Consensus 314 s~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 314 TGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEETTSEEEEEEC--
T ss_pred EecCCCcEEEEEecc
Confidence 999999999999864
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.9e-43 Score=365.01 Aligned_cols=303 Identities=15% Similarity=0.177 Sum_probs=257.3
Q ss_pred CCCCCCcccccccCC---CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEee-------ccCceeEEE
Q 038802 30 LSQTPESKYWSSFKP---HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAIS-------SFKDVVTCS 99 (532)
Q Consensus 30 ~~~~~~~~~w~~~~~---~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~-------~~~~~v~~~ 99 (532)
.+.++.+++|+.... ..+.+|.+.|++++|+|++++|++|+.|+.|++||..+++....+. +|.+.|.++
T Consensus 166 ~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v 245 (611)
T 1nr0_A 166 GSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGL 245 (611)
T ss_dssp EETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEE
T ss_pred EeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEE
Confidence 457888999985432 3568999999999999999999999999999999999998888874 799999999
Q ss_pred EEccCCCEEEEEcCCCCEEEEECCCCceEE-------------------------------------------EecCCCC
Q 038802 100 SFRPDGSLLAASDLSGLIQVFDVKSRTPLR-------------------------------------------RLKSHTR 136 (532)
Q Consensus 100 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~-------------------------------------------~~~~h~~ 136 (532)
+|+|+|++|++|+.|++|++||+.+++++. .+.+|..
T Consensus 246 ~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~ 325 (611)
T 1nr0_A 246 TWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNK 325 (611)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSS
T ss_pred EECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCC
Confidence 999999999999999999999998776543 3457999
Q ss_pred CEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec-cC---------------------------------------
Q 038802 137 PVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL-FG--------------------------------------- 176 (532)
Q Consensus 137 ~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~--------------------------------------- 176 (532)
.|.+++|+| ++.+|++++.|++|++||+.+++....+ .+
T Consensus 326 ~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~ 404 (611)
T 1nr0_A 326 AITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSK 404 (611)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTS
T ss_pred CEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccc
Confidence 999999999 9999999999999999999876543322 11
Q ss_pred ------------------------------------------CCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCce
Q 038802 177 ------------------------------------------HKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSK 214 (532)
Q Consensus 177 ------------------------------------------~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~ 214 (532)
|...+.+++|+| +++++++|+.|++|++||+.+....
T Consensus 405 ~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~sp-dg~~lasgs~D~~v~lwd~~~~~~~ 483 (611)
T 1nr0_A 405 AVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSN-DKQFVAVGGQDSKVHVYKLSGASVS 483 (611)
T ss_dssp CCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECT-TSCEEEEEETTSEEEEEEEETTEEE
T ss_pred eeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeC-CCCEEEEeCCCCeEEEEEccCCcee
Confidence 224467889999 9999999999999999999875433
Q ss_pred eEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEE--ccCCCcceEEEEEeccCCCCCccccccEEEEE
Q 038802 215 SVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYS--MESHNKTVTSVCVGRVGNESGEEAMQYRILSV 291 (532)
Q Consensus 215 ~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~ 291 (532)
......|...|.+++|+|+|++|++++ |++|++||+.+..++... ...|...|.+++|+|+ +.+|+++
T Consensus 484 ~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspd---------g~~lasg 554 (611)
T 1nr0_A 484 EVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPD---------NVRLATG 554 (611)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTT---------SSEEEEE
T ss_pred eeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCC---------CCEEEEE
Confidence 333367999999999999999999999 899999999874355443 3449999999999999 6899999
Q ss_pred ecCCeEEEEECCCce-EE-Eee-ec-CCCeeEEEEecCCCEEEEEecCCcEEEEeec
Q 038802 292 ALDGYMKVFDYGKMK-VT-HSM-RF-PAPLMSVAFSPDCMTRVIGTSNGTIFAGRRK 344 (532)
Q Consensus 292 ~~dg~i~iwd~~~~~-~~-~~~-~~-~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~ 344 (532)
+.|++|++||+.++. .. ..+ .| ...|++++|+|+++ |++|+.||.|++|+++
T Consensus 555 s~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 555 SLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp ETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred ECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEecc
Confidence 999999999998754 22 334 36 68999999999998 9999999999999973
No 17
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.8e-41 Score=325.40 Aligned_cols=288 Identities=21% Similarity=0.396 Sum_probs=250.9
Q ss_pred ccCccccCeeEEEEcCC-CCeEEEEEeCCeEEEEeCCCc-----eEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEE
Q 038802 46 QIPGLVSSINSIVFSPT-TSHLFAATHSASLTLFSSQTL-----EKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQV 119 (532)
Q Consensus 46 ~~~~h~~~V~~i~~sp~-~~~l~~~~~d~~v~i~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~i 119 (532)
+|.||.++|++|+|+|+ +++|++|+.|+.|+|||+.+. .....+.+|...|.+++|+|++++|++|+.||.|++
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 112 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceE
Confidence 57899999999999998 579999999999999998653 356778899999999999999999999999999999
Q ss_pred EECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeE-EEeccCCCCceEEEEEeCCC-CCEEEEE
Q 038802 120 FDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESV-VLDLFGHKDYVRCGDCSPVN-GDMFVTG 197 (532)
Q Consensus 120 wd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~~v~~i~~~~~~-~~~l~s~ 197 (532)
|+............+...+..+.+++ ++..+++|+.|+.+++||+..... .....+|...+.+++|++.. ..+++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 113 WDLTTGTTTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEE
T ss_pred EeecccceeeeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEE
Confidence 99999988888888999999999998 889999999999999999987654 34457899999999998732 3578899
Q ss_pred eCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccC
Q 038802 198 SYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVG 276 (532)
Q Consensus 198 s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~ 276 (532)
+.|+.|++||+++.+....+ .+|..+|.+++|+|++++|++++ |+.|++||+++. ..+..+.. ...+.+++|+|++
T Consensus 192 ~~d~~i~i~d~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~-~~~~~~~~-~~~v~~~~~~~~~ 268 (340)
T 4aow_A 192 GWDKLVKVWNLANCKLKTNH-IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG-KHLYTLDG-GDIINALCFSPNR 268 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT-EEEEEEEC-SSCEEEEEECSSS
T ss_pred cCCCEEEEEECCCCceeeEe-cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC-ceeeeecC-CceEEeeecCCCC
Confidence 99999999999986554444 37899999999999999999998 999999999887 77777764 4579999999873
Q ss_pred CCCCccccccEEEEEecCCeEEEEECCCceEEEeee----------cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCc
Q 038802 277 NESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR----------FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 277 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----------~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~ 346 (532)
.+++++.|+.|++||+.++..+..+. |...|++++|+|+|++|++|+.||.|++|++.++
T Consensus 269 ----------~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 269 ----------YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp ----------SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred ----------ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 57778889999999999988776653 5678999999999999999999999999999886
Q ss_pred c
Q 038802 347 E 347 (532)
Q Consensus 347 ~ 347 (532)
.
T Consensus 339 t 339 (340)
T 4aow_A 339 T 339 (340)
T ss_dssp -
T ss_pred C
Confidence 4
No 18
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.3e-41 Score=321.66 Aligned_cols=257 Identities=20% Similarity=0.285 Sum_probs=233.1
Q ss_pred eEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEE
Q 038802 84 EKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFW 163 (532)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iw 163 (532)
+...++.+|.+.|++++|+|++++|++|+.||+|++||+.++..+..+..|..+|.+++|+| ++++|++|+.|++|++|
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeC-CCCEEEEECCCCEEEEE
Confidence 45677899999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred ECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEec-CCCEEEEEc-
Q 038802 164 DVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLP-SGGLIATAG- 241 (532)
Q Consensus 164 d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~- 241 (532)
|+.+++.+..+.+|.+.|.+++|+| ++.+|++|+.||+|++||++++........+|...|.+++|+| ++.++++++
T Consensus 83 d~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 83 NYNTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 9999999999999999999999999 9999999999999999999886555444558999999999999 678999988
Q ss_pred CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEE
Q 038802 242 GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSV 320 (532)
Q Consensus 242 d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~ 320 (532)
|+.|++||+............|...+..+.++|.+. +.++++++.||.|++||+.+++++..+. |...|.++
T Consensus 162 D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~ 234 (304)
T 2ynn_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPD-------KPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFA 234 (304)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTT-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCC-------CCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEE
Confidence 999999999876444444456778899999988532 6799999999999999999999998887 78899999
Q ss_pred EEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 321 AFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 321 ~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+|+|++.+|++|+.||.|++|+..+.+..
T Consensus 235 ~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 235 VFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (304)
T ss_dssp EECSSSSEEEEEETTSCEEEEETTTCCEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 99999999999999999999999887644
No 19
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-41 Score=328.12 Aligned_cols=291 Identities=15% Similarity=0.183 Sum_probs=261.1
Q ss_pred CCCccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEEC
Q 038802 43 KPHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDV 122 (532)
Q Consensus 43 ~~~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~ 122 (532)
+...+.+|.++|++++|+|+++++++++.||.|++||+.+++....+.+|...|.+++|+|++++|++++.||.|++||+
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCC-----CeEEEEECCCCe-----------EEEeccCCCC--ceEEE
Q 038802 123 KSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDD-----GIVKFWDVAGES-----------VVLDLFGHKD--YVRCG 184 (532)
Q Consensus 123 ~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~d-----g~i~iwd~~~~~-----------~~~~~~~~~~--~v~~i 184 (532)
.+++.+..+. |...|.+++|+| ++.++++++.+ |.|++||+..+. ....+..|.. .+.++
T Consensus 104 ~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 104 SNGQCVATWK-SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp TTCCEEEEEE-CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred CCCcEEEEee-cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 9999998888 899999999999 99999999999 999999987543 2334445665 89999
Q ss_pred EEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCC
Q 038802 185 DCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESH 263 (532)
Q Consensus 185 ~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~ 263 (532)
+|+| +++++++++.||.|++||+++..........|...|.+++|+|++.+|++++ |+.|++||+.++ ..+..+. +
T Consensus 182 ~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~-~ 258 (369)
T 3zwl_B 182 GWST-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL-QVLKKYE-T 258 (369)
T ss_dssp EECG-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEEE-C
T ss_pred EEcC-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC-ceeeeec-C
Confidence 9999 9999999999999999999874344444447899999999999999999998 899999999887 6666665 7
Q ss_pred CcceEEEEEeccCCCCCccccccEEEEEecCC--------------eEEEEECCCceEEEeee-cCCCeeEEEEecCCCE
Q 038802 264 NKTVTSVCVGRVGNESGEEAMQYRILSVALDG--------------YMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMT 328 (532)
Q Consensus 264 ~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~ 328 (532)
...+.+++|+|+ +.++++++.++ .+++||..+++.+..+. |...|++++|+|++++
T Consensus 259 ~~~~~~~~~~~~---------~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 329 (369)
T 3zwl_B 259 DCPLNTAVITPL---------KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTS 329 (369)
T ss_dssp SSCEEEEEECSS---------SSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSE
T ss_pred CCCceeEEecCC---------CceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCE
Confidence 788999999999 67899998888 89999999999988887 7889999999999999
Q ss_pred EEEEecCCcEEEEeecCcc
Q 038802 329 RVIGTSNGTIFAGRRKKKE 347 (532)
Q Consensus 329 l~~g~~dg~i~iw~~~~~~ 347 (532)
|++|+.||.|++|++.+..
T Consensus 330 l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 330 YASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp EEEEETTSEEEEEEECHHH
T ss_pred EEEEcCCCeEEEEECcccc
Confidence 9999999999999998754
No 20
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.8e-41 Score=322.25 Aligned_cols=282 Identities=18% Similarity=0.261 Sum_probs=254.6
Q ss_pred cCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEE---EEee--ccCceeEEEEEccCCCEEEEEcCCCCEEEEE
Q 038802 47 IPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKH---SAIS--SFKDVVTCSSFRPDGSLLAASDLSGLIQVFD 121 (532)
Q Consensus 47 ~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~---~~~~--~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd 121 (532)
..+|.++|++++|+|+++++++++ ||.|++||+.++... ..+. .|...|.+++|+|++++|++|+.||.|++||
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 125 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence 357999999999999999999988 999999999876532 2333 7889999999999999999999999999999
Q ss_pred CCCCc--eEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeC
Q 038802 122 VKSRT--PLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSY 199 (532)
Q Consensus 122 ~~~~~--~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~ 199 (532)
+.+++ ....+..|...|.+++|+| ++.++++++.||.|++||+++++.+..+..|...|.+++|+| +++++++++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~ 203 (337)
T 1gxr_A 126 LAAPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN-DGTKLWTGGL 203 (337)
T ss_dssp CCCC--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEET
T ss_pred CCCCCcceeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECC-CCCEEEEEec
Confidence 99877 6677888999999999999 899999999999999999999999999999999999999999 9999999999
Q ss_pred CCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCC
Q 038802 200 DHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNE 278 (532)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 278 (532)
||.|++||+++++. .....+...+.+++|+|++.++++++ ++.|++||+.+. . ...+..|...|.+++|+|+
T Consensus 204 dg~i~~~d~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~-~-~~~~~~~~~~v~~~~~~~~--- 276 (337)
T 1gxr_A 204 DNTVRSWDLREGRQ--LQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP-D-KYQLHLHESCVLSLKFAYC--- 276 (337)
T ss_dssp TSEEEEEETTTTEE--EEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS-C-EEEECCCSSCEEEEEECTT---
T ss_pred CCcEEEEECCCCce--EeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC-C-eEEEcCCccceeEEEECCC---
Confidence 99999999988543 33446788999999999999999998 899999999876 3 3467789999999999998
Q ss_pred CCccccccEEEEEecCCeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeec
Q 038802 279 SGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRK 344 (532)
Q Consensus 279 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~ 344 (532)
+.++++++.||.|++||+.+++.+....+...|.+++|+|++++|++++.||.|++|++.
T Consensus 277 ------~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 277 ------GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp ------SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred ------CCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 678999999999999999999998888899999999999999999999999999999973
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.8e-41 Score=348.47 Aligned_cols=293 Identities=24% Similarity=0.402 Sum_probs=261.5
Q ss_pred CCCCCcccccccCC--CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEE
Q 038802 31 SQTPESKYWSSFKP--HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLL 108 (532)
Q Consensus 31 ~~~~~~~~w~~~~~--~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 108 (532)
..++.+++|+.-.. ..+.+|.+.|.+++|+|+++++++++.|+.|++||... .....+.+|...|.+++|+|++++|
T Consensus 281 ~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l 359 (577)
T 2ymu_A 281 SDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTI 359 (577)
T ss_dssp ETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEE
T ss_pred eCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEE
Confidence 46678899984322 34588999999999999999999999999999999764 5567788999999999999999999
Q ss_pred EEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeC
Q 038802 109 AASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSP 188 (532)
Q Consensus 109 ~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~ 188 (532)
++|+.||.|++||. +++.+..+.+|...|.+++|+| ++.+|++++.|+.|++||. +++.+..+.+|...|++++|+|
T Consensus 360 ~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~ 436 (577)
T 2ymu_A 360 ASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP 436 (577)
T ss_dssp EEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECT
T ss_pred EEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECC-CCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECC
Confidence 99999999999995 5678888999999999999999 9999999999999999996 5678888899999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcce
Q 038802 189 VNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTV 267 (532)
Q Consensus 189 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i 267 (532)
++.+|++++.|++|++||... +.. .....|...|.+++|+|++++|++++ |+.|++||. ++ +++..+.+|...|
T Consensus 437 -d~~~l~~~~~d~~v~~w~~~~-~~~-~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~-~~~~~~~~h~~~v 511 (577)
T 2ymu_A 437 -DDQTIASASDDKTVKLWNRNG-QLL-QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NG-QLLQTLTGHSSSV 511 (577)
T ss_dssp -TSSEEEEEETTSEEEEEETTS-CEE-EEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TS-CEEEEEECCSSCE
T ss_pred -CCCEEEEEcCCCEEEEEECCC-CEE-EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CC-CEEEEEeCCCCCE
Confidence 999999999999999999753 333 33347899999999999999999998 899999995 33 7788899999999
Q ss_pred EEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEe
Q 038802 268 TSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGR 342 (532)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~ 342 (532)
++++|+|+ +.+|++++.||.|++||. +++++..+. |.++|++++|+|||++|++++.||.|++||
T Consensus 512 ~~l~~s~d---------g~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 512 RGVAFSPD---------GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEECTT---------SSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEcCC---------CCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999 678999999999999996 567777766 889999999999999999999999999997
No 22
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=321.85 Aligned_cols=263 Identities=24% Similarity=0.302 Sum_probs=243.5
Q ss_pred CCCCCCCCcccccccCC-----CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEc
Q 038802 28 RNLSQTPESKYWSSFKP-----HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFR 102 (532)
Q Consensus 28 ~~~~~~~~~~~w~~~~~-----~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~ 102 (532)
...+.++.+++|+.-.. ..+.+|...|.+++|+|++.++++++.|+.|++||+.+++.+..+..|...+.+++|+
T Consensus 52 ~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~s 131 (321)
T 3ow8_A 52 VTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFS 131 (321)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEEC
T ss_pred EEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEEC
Confidence 34468899999985433 2468999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceE
Q 038802 103 PDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVR 182 (532)
Q Consensus 103 ~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~ 182 (532)
|++++|++|+.||.|++|++.+++....+..|...|.+++|+| ++.+|++|+.||.|++||+++++.+..+.+|..+|.
T Consensus 132 pdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 210 (321)
T 3ow8_A 132 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIR 210 (321)
T ss_dssp TTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCC
T ss_pred CCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCcee
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEcc
Q 038802 183 CGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSME 261 (532)
Q Consensus 183 ~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~ 261 (532)
+++|+| ++.+|++|+.||+|++||+++......+. +|...|.+++|+|++.+|++++ |+.|++||+.++ .++..+.
T Consensus 211 ~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~-~~~~~~~ 287 (321)
T 3ow8_A 211 SLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR-TCVHTFF 287 (321)
T ss_dssp EEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEEC
T ss_pred EEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEEc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-EEEEEEc
Confidence 999999 99999999999999999999866554443 7899999999999999999999 999999999887 8889999
Q ss_pred CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECC
Q 038802 262 SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYG 303 (532)
Q Consensus 262 ~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 303 (532)
+|...|.+++|+|+ +.+|++++.||.|++||..
T Consensus 288 ~h~~~v~~v~~s~~---------g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 288 DHQDQVWGVKYNGN---------GSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CCSSCEEEEEECTT---------SSEEEEEETTCCEEEEECC
T ss_pred CCCCcEEEEEECCC---------CCEEEEEeCCCeEEEEeCC
Confidence 99999999999998 6789999999999999963
No 23
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.2e-41 Score=333.44 Aligned_cols=286 Identities=17% Similarity=0.209 Sum_probs=254.9
Q ss_pred CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCce------EEEEeeccCceeEEEEEccC----C---CEEEEE
Q 038802 45 HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLE------KHSAISSFKDVVTCSSFRPD----G---SLLAAS 111 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~l~~g 111 (532)
..+.+|.++|++++|+| +++++|+.||.|++||+.+++ ....+.+|...|++++|+|+ + ++|++|
T Consensus 10 ~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence 45679999999999999 699999999999999999887 78888899999999999999 9 999999
Q ss_pred cCCCCEEEEECCCCce-----EEEecCC-----CCCEEEEEee----cCCCcE-EEEEeCCCeEEEEECCC------CeE
Q 038802 112 DLSGLIQVFDVKSRTP-----LRRLKSH-----TRPVRFVKYP----FLDKLH-LVSGGDDGIVKFWDVAG------ESV 170 (532)
Q Consensus 112 ~~dg~i~iwd~~~~~~-----~~~~~~h-----~~~i~~~~~~----~~~~~~-l~s~s~dg~i~iwd~~~------~~~ 170 (532)
+.||.|++||+.+++. ...+..| ...|.+++|+ | ++.+ |++++.||.|++||+.+ ++.
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 9999999999998887 8888888 5999999999 8 8888 99999999999999988 555
Q ss_pred EE-----ec-------cCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEec---C---CCcEEEEEEec
Q 038802 171 VL-----DL-------FGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVN---H---GKPIEDVMFLP 232 (532)
Q Consensus 171 ~~-----~~-------~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---~---~~~v~~i~~~~ 232 (532)
+. .+ ..|...|.+++|+| ++ ++++++.||.|++||+++.+....+. . | ..+|.+++|+|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNGTVQISELSTLRPLYNFE-SQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTSEEEEEETTTTEEEEEEE-CCC---CCCCCEEEEEECS
T ss_pred eeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCCcEEEEECCCCceeEEEe-ccccccccCCccceEEECC
Confidence 44 55 45889999999999 88 99999999999999999865544444 4 6 89999999999
Q ss_pred CCCEEEEEc-C---CeEEEEEccCCCeeeEEccC-------------CCcceEEEEEeccCCCCCccccccEEEEEecCC
Q 038802 233 SGGLIATAG-G---NSVKIWDLIGGGKMVYSMES-------------HNKTVTSVCVGRVGNESGEEAMQYRILSVALDG 295 (532)
Q Consensus 233 ~~~~l~~~~-d---~~i~iwd~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg 295 (532)
++.+|++++ | +.|++||+.++ +.+..+.. |...|.+++|+|+ +.+|++++.||
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~l~~~~~dg 313 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFG-ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS---------GETLCSAGWDG 313 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTC-CEEEEECBC--------CCBSBSSCEEEEEECSS---------SSEEEEEETTS
T ss_pred CCCEEEEEecCCCCceEEEEECCCC-cccceeccCcccccccccccccCCcEEEEEECCC---------CCEEEEEeCCC
Confidence 999999998 7 89999999887 77888888 9999999999998 67999999999
Q ss_pred eEEEEECCCceEEEeee-------c---------------CCCeeEEEEecCC----------CEEEEEecCCcEEEEee
Q 038802 296 YMKVFDYGKMKVTHSMR-------F---------------PAPLMSVAFSPDC----------MTRVIGTSNGTIFAGRR 343 (532)
Q Consensus 296 ~i~iwd~~~~~~~~~~~-------~---------------~~~v~~~~~s~~~----------~~l~~g~~dg~i~iw~~ 343 (532)
.|++||+.+++.+..+. | ..+|++++|+|+| ++|++|+.||.|++|++
T Consensus 314 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 314 KLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp EEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred eEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 99999999999998887 4 7899999999998 79999999999999999
Q ss_pred cCc
Q 038802 344 KKK 346 (532)
Q Consensus 344 ~~~ 346 (532)
.++
T Consensus 394 ~~g 396 (397)
T 1sq9_A 394 AGG 396 (397)
T ss_dssp EC-
T ss_pred CCC
Confidence 875
No 24
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.6e-41 Score=333.36 Aligned_cols=261 Identities=21% Similarity=0.397 Sum_probs=240.0
Q ss_pred CCCCCcccccccCC---CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCE
Q 038802 31 SQTPESKYWSSFKP---HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSL 107 (532)
Q Consensus 31 ~~~~~~~~w~~~~~---~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 107 (532)
+.++.+++|+.... ..+.+|.+.|++++|+|+++++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++
T Consensus 127 s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 206 (410)
T 1vyh_C 127 SEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDH 206 (410)
T ss_dssp ESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSE
T ss_pred eCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCE
Confidence 46789999996553 456899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEe
Q 038802 108 LAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCS 187 (532)
Q Consensus 108 l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~ 187 (532)
|++|+.||+|++||+.++.++..+.+|...|.++.|+| ++.++++|+.|++|++||+.++++...+.+|...|.+++|+
T Consensus 207 l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~ 285 (410)
T 1vyh_C 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWA 285 (410)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEc
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred CCC-------------------CCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEE
Q 038802 188 PVN-------------------GDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKI 247 (532)
Q Consensus 188 ~~~-------------------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~i 247 (532)
|.. +.+|++|+.|++|++||++++.....+. +|...|.+++|+|++.+|++++ |+.|++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~D~~i~v 364 (410)
T 1vyh_C 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRV 364 (410)
T ss_dssp CSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECSSSSCEEEEETTTEEEE
T ss_pred CcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE-CCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 831 6789999999999999999865554443 7999999999999999999998 899999
Q ss_pred EEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECC
Q 038802 248 WDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYG 303 (532)
Q Consensus 248 wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 303 (532)
||+.++ +++..+.+|...|++++|+|+ +.+|++|+.||.|++|+++
T Consensus 365 wd~~~~-~~~~~~~~h~~~v~~l~~~~~---------~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 365 WDYKNK-RCMKTLNAHEHFVTSLDFHKT---------APYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp ECCTTS-CCCEEEECCSSCEEEEEECSS---------SSCEEEEETTSEEEEEC--
T ss_pred EECCCC-ceEEEEcCCCCcEEEEEEcCC---------CCEEEEEeCCCcEEEEeCC
Confidence 999876 788889999999999999999 6789999999999999863
No 25
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.3e-40 Score=349.92 Aligned_cols=284 Identities=24% Similarity=0.423 Sum_probs=245.7
Q ss_pred ccCccccCeeEEEEcCCC-CeEEEEEeCCeEEEEeCCC-----ceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEE
Q 038802 46 QIPGLVSSINSIVFSPTT-SHLFAATHSASLTLFSSQT-----LEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQV 119 (532)
Q Consensus 46 ~~~~h~~~V~~i~~sp~~-~~l~~~~~d~~v~i~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~i 119 (532)
.+.+|.+.|++++|+|++ .+|++|+.|+.|++|++.+ +.....+.+|...|.+++|+|++++|++|+.||+|++
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 367899999999999875 6899999999999999865 3456778999999999999999999999999999999
Q ss_pred EECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec---cCCCCceEEEEEeCCCC--CEE
Q 038802 120 FDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL---FGHKDYVRCGDCSPVNG--DMF 194 (532)
Q Consensus 120 wd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~~~v~~i~~~~~~~--~~l 194 (532)
||+.++.....+.+|...|.+++|+| ++.+|++|+.|++|++||.......... .+|...|.+++|+| ++ ..+
T Consensus 457 wd~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l 534 (694)
T 3dm0_A 457 WDLAAGVSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSP-NTLQPTI 534 (694)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECS-CSSSCEE
T ss_pred EECCCCcceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeC-CCCcceE
Confidence 99999999999999999999999999 8999999999999999998765443332 46899999999999 54 689
Q ss_pred EEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEe
Q 038802 195 VTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVG 273 (532)
Q Consensus 195 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~ 273 (532)
++|+.|++|++||+++.+....+ ..|...|.+++|+|++++|++++ |+.|++||+.++ +.+..+.. ...+.+++|+
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~-~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~-~~~~~~~~-~~~v~~~~~s 611 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTL-AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG-KKLYSLEA-NSVIHALCFS 611 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT-EEEECCBC-SSCEEEEEEC
T ss_pred EEEeCCCeEEEEECCCCcEEEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC-ceEEEecC-CCcEEEEEEc
Confidence 99999999999999986554444 37999999999999999999999 999999999887 66766654 5679999999
Q ss_pred ccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecC--------------------CCeeEEEEecCCCEEEEEe
Q 038802 274 RVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFP--------------------APLMSVAFSPDCMTRVIGT 333 (532)
Q Consensus 274 ~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------------~~v~~~~~s~~~~~l~~g~ 333 (532)
|+ +.+++ ++.++.|++||+.+++.+..+... ..+++++|+|+|++|++|+
T Consensus 612 p~---------~~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs 681 (694)
T 3dm0_A 612 PN---------RYWLC-AATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGY 681 (694)
T ss_dssp SS---------SSEEE-EEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEE
T ss_pred CC---------CcEEE-EEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEc
Confidence 98 44555 455777999999999888766421 1368899999999999999
Q ss_pred cCCcEEEEeec
Q 038802 334 SNGTIFAGRRK 344 (532)
Q Consensus 334 ~dg~i~iw~~~ 344 (532)
.||.|++|++.
T Consensus 682 ~Dg~i~iW~i~ 692 (694)
T 3dm0_A 682 TDGVIRVWGIG 692 (694)
T ss_dssp TTSEEEEEEC-
T ss_pred CCCeEEEEecc
Confidence 99999999985
No 26
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-40 Score=313.26 Aligned_cols=284 Identities=17% Similarity=0.238 Sum_probs=253.9
Q ss_pred CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC
Q 038802 45 HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS 124 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 124 (532)
..+.+|.++|++++| |+++++++++.||.|++||+.++.....+..|...|.+++|+|++++|++|+.||.|++|++..
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 90 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFA 90 (313)
T ss_dssp EEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTC
T ss_pred HHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeee
Confidence 356899999999999 9999999999999999999999999999999999999999999999999999999999999865
Q ss_pred C---ceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCC
Q 038802 125 R---TPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDH 201 (532)
Q Consensus 125 ~---~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg 201 (532)
. +.+..+.+|...|.++.| ++..+++++.||.|++|| .++....+..|...+.++.++|.+++.+++++.||
T Consensus 91 ~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 165 (313)
T 3odt_A 91 TSGEDPLYTLIGHQGNVCSLSF---QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADK 165 (313)
T ss_dssp CTTSCC-CEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTS
T ss_pred cCCCCcccchhhcccCEEEEEe---cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCC
Confidence 4 567778899999999999 456899999999999999 67888888999999999999987899999999999
Q ss_pred eEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCC
Q 038802 202 TVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESG 280 (532)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 280 (532)
.|++||... ........|...+.+++|+|++. +++++ |+.|++||++++ +.+..+..|...|++++|+|+
T Consensus 166 ~i~i~d~~~--~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~----- 236 (313)
T 3odt_A 166 TIKLWQNDK--VIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG-DVLRTYEGHESFVYCIKLLPN----- 236 (313)
T ss_dssp CEEEEETTE--EEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECTT-----
T ss_pred CEEEEecCc--eEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch-hhhhhhhcCCceEEEEEEecC-----
Confidence 999999443 44555545899999999999998 55555 999999999887 788888999999999999998
Q ss_pred ccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 281 EEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 281 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+ .+++++.||.|++||+.+++....+. +..+|.+++|+|+++ +++++.||.|++|++.+++..
T Consensus 237 ----~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 237 ----G-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp ----S-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCC
T ss_pred ----C-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCcee
Confidence 4 59999999999999999999988887 667999999999998 667999999999999876544
No 27
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=320.73 Aligned_cols=246 Identities=15% Similarity=0.194 Sum_probs=213.7
Q ss_pred ccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEE----eeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC
Q 038802 49 GLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSA----ISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS 124 (532)
Q Consensus 49 ~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 124 (532)
.|..+|++++|+|++ .+++|+.||.|+|||+.+++.... ..+|.+.|++++|+|+|++|++|+.||+|++||+.+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 456789999999986 688999999999999988765433 458999999999999999999999999999999999
Q ss_pred CceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEecc--CCCCceEEEEEeCCCCCEEEEEeCCCe
Q 038802 125 RTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLF--GHKDYVRCGDCSPVNGDMFVTGSYDHT 202 (532)
Q Consensus 125 ~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~l~s~s~dg~ 202 (532)
++++..+.+|.+.|.+++|+|.+..++++|+.|++|++||+++++....+. .|...+.+++|+|.++.+|++|+.||+
T Consensus 159 ~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~ 238 (344)
T 4gqb_B 159 QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT 238 (344)
T ss_dssp TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE
T ss_pred CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc
Confidence 999999999999999999999555689999999999999999998887764 456679999999967789999999999
Q ss_pred EEEEEcccCCceeEEEecCCCcEEEEEEecCC-CEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCC
Q 038802 203 VKLWDVRVENSKSVMEVNHGKPIEDVMFLPSG-GLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESG 280 (532)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 280 (532)
|++||+++++....+. .|...|.+++|+|++ ++|++++ |++|++||+.++ ++ ..+.+|...|++++|+|++
T Consensus 239 v~~wd~~~~~~~~~~~-~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~-~~-~~~~~H~~~V~~v~~sp~~---- 311 (344)
T 4gqb_B 239 VSLVDTKSTSCVLSSA-VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS-EL-FRSQAHRDFVRDATWSPLN---- 311 (344)
T ss_dssp EEEEESCC--CCEEEE-CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC-EE-EEECCCSSCEEEEEECSSS----
T ss_pred EEEEECCCCcEEEEEc-CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-cE-EEEcCCCCCEEEEEEeCCC----
Confidence 9999999877666555 799999999999998 5788888 999999999876 44 4568999999999999986
Q ss_pred ccccccEEEEEecCCeEEEEECCCce
Q 038802 281 EEAMQYRILSVALDGYMKVFDYGKMK 306 (532)
Q Consensus 281 ~~~~~~~l~s~~~dg~i~iwd~~~~~ 306 (532)
..++++++.||+|++|++.+..
T Consensus 312 ----~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 312 ----HSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp ----TTEEEEEETTSCEEEEECCC--
T ss_pred ----CeEEEEEcCCCeEEEEECCCCC
Confidence 4678899999999999998754
No 28
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.7e-40 Score=325.27 Aligned_cols=283 Identities=18% Similarity=0.232 Sum_probs=239.6
Q ss_pred ccCccccCeeEEEEcCCC-CeEEEEEeCCeEEEEeCCCceEEEEee--ccCceeEEEEEcc-CCCEEEEEcCCCCEEEEE
Q 038802 46 QIPGLVSSINSIVFSPTT-SHLFAATHSASLTLFSSQTLEKHSAIS--SFKDVVTCSSFRP-DGSLLAASDLSGLIQVFD 121 (532)
Q Consensus 46 ~~~~h~~~V~~i~~sp~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~g~~dg~i~iwd 121 (532)
.+.+|.+.|++++|+|++ +++++|+.||.|++||+.+++....+. +|...|.+++|+| ++++|++|+.||.|++||
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 457899999999999999 899999999999999999887777665 6999999999999 789999999999999999
Q ss_pred CCCCceEEEecC---CCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCC-EEEEE
Q 038802 122 VKSRTPLRRLKS---HTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGD-MFVTG 197 (532)
Q Consensus 122 ~~~~~~~~~~~~---h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~l~s~ 197 (532)
+.+ ..+..+.. |...|.+++|+| ++.++++|+.|+.|++||+ +++.+..+.+|...|.+++|+| ++. ++++|
T Consensus 148 ~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~ 223 (383)
T 3ei3_B 148 FSG-SVIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNP-RCDWLMATS 223 (383)
T ss_dssp TTS-CEEEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECS-SCTTEEEEE
T ss_pred CCC-CceEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECC-CCCCEEEEE
Confidence 986 55555544 448899999999 8999999999999999999 5778888999999999999999 777 99999
Q ss_pred eCCCeEEEEEcccCC--ceeEEEecCCCcEEEEEEec-CCCEEEEEc-CCeEEEEEccCCCeeeEEccCC-------C--
Q 038802 198 SYDHTVKLWDVRVEN--SKSVMEVNHGKPIEDVMFLP-SGGLIATAG-GNSVKIWDLIGGGKMVYSMESH-------N-- 264 (532)
Q Consensus 198 s~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~-------~-- 264 (532)
+.|+.|++||+++.. ........|...|.+++|+| ++.+|++++ |+.|++||+++. .....+..| .
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~ 302 (383)
T 3ei3_B 224 SVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW-SKPDQIIIHPHRQFQHLTP 302 (383)
T ss_dssp ETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT-TSCSEEEECCBCCCTTSCC
T ss_pred eCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC-ccccccccccccccccccc
Confidence 999999999999743 22333447999999999999 999999998 899999999876 333333322 2
Q ss_pred --------cceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee---cCCCeeEEEEecCCCEEEEEe
Q 038802 265 --------KTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR---FPAPLMSVAFSPDCMTRVIGT 333 (532)
Q Consensus 265 --------~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~g~ 333 (532)
..+..++++|++ .+ +++.||.|++||+.+++.+..+. +...+.+++|+|+|++|++|+
T Consensus 303 ~~~~~~p~~~~~~~~~s~dg---------~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 303 IKATWHPMYDLIVAGRYPDD---------QL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp CCCEECSSSSEEEEECBCCT---------TT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE
T ss_pred eEEeccCCCCceEEEecCCc---------cc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec
Confidence 234446666663 33 78899999999999999998887 456778889999999999997
Q ss_pred cCCcEEEEeecC
Q 038802 334 SNGTIFAGRRKK 345 (532)
Q Consensus 334 ~dg~i~iw~~~~ 345 (532)
||.|++|++++
T Consensus 372 -d~~i~iw~~~~ 382 (383)
T 3ei3_B 372 -GFNILIWNRED 382 (383)
T ss_dssp -TTEEEEEECC-
T ss_pred -CCcEEEEecCC
Confidence 99999999874
No 29
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-41 Score=337.58 Aligned_cols=307 Identities=16% Similarity=0.210 Sum_probs=264.5
Q ss_pred CCCCCcccccccCC-----CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCC----ceEEEEeeccCceeEEEEE
Q 038802 31 SQTPESKYWSSFKP-----HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQT----LEKHSAISSFKDVVTCSSF 101 (532)
Q Consensus 31 ~~~~~~~~w~~~~~-----~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~----~~~~~~~~~~~~~v~~~~~ 101 (532)
+.++.+++|+.... .....|...|++++|+|++.+|++++.||.|++||+.+ .+....+.+|...|++++|
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 121 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKF 121 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEE
Confidence 57788999997543 23357999999999999999999999999999999987 4578888999999999999
Q ss_pred ccC-CCEEEEEcCCCCEEEEECCCCc------eEE---EecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEE
Q 038802 102 RPD-GSLLAASDLSGLIQVFDVKSRT------PLR---RLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVV 171 (532)
Q Consensus 102 ~~~-~~~l~~g~~dg~i~iwd~~~~~------~~~---~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~ 171 (532)
+|+ +++|++|+.||.|++||+.+++ ... .+..|...|.+++|+|..+.++++++.||.|++||+++++.+
T Consensus 122 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 201 (416)
T 2pm9_A 122 NAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEV 201 (416)
T ss_dssp CSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEE
T ss_pred cCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcc
Confidence 998 8999999999999999998876 332 346799999999999933889999999999999999999998
Q ss_pred EeccCC------CCceEEEEEeCCCCCEEEEEeCCC---eEEEEEcccCCceeEEEe-cCCCcEEEEEEec-CCCEEEEE
Q 038802 172 LDLFGH------KDYVRCGDCSPVNGDMFVTGSYDH---TVKLWDVRVENSKSVMEV-NHGKPIEDVMFLP-SGGLIATA 240 (532)
Q Consensus 172 ~~~~~~------~~~v~~i~~~~~~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~-~~~~~v~~i~~~~-~~~~l~~~ 240 (532)
..+..| ...|.+++|+|.+..++++++.|+ .|++||+++......... .|...|.+++|+| ++.+|+++
T Consensus 202 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~ 281 (416)
T 2pm9_A 202 IHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSS 281 (416)
T ss_dssp EEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEE
T ss_pred eEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEE
Confidence 888776 789999999993347999999999 999999998643333333 6899999999999 89999999
Q ss_pred c-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEee--------
Q 038802 241 G-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSM-------- 311 (532)
Q Consensus 241 ~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------- 311 (532)
+ |+.|++||+.++ +++..+..|...|.+++|+|++ ..++++++.||.|++||+.+.......
T Consensus 282 ~~dg~v~~wd~~~~-~~~~~~~~~~~~v~~~~~s~~~--------~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 352 (416)
T 2pm9_A 282 GRDNTVLLWNPESA-EQLSQFPARGNWCFKTKFAPEA--------PDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQ 352 (416)
T ss_dssp ESSSEEEEECSSSC-CEEEEEECSSSCCCCEEECTTC--------TTEEEECCSSSEEEEEESCCCCCSSCC--------
T ss_pred eCCCCEEEeeCCCC-ccceeecCCCCceEEEEECCCC--------CCEEEEEecCCcEEEEEccCCCCCccccccccccc
Confidence 8 899999999887 7888899999999999999984 379999999999999999875422111
Q ss_pred -------e---------------------cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCc
Q 038802 312 -------R---------------------FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 312 -------~---------------------~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~ 346 (532)
. +..++.+++|+|+|++|++|+.||.|++|++.++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 353 ESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp --------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred CCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 0 4567789999999999999999999999998865
No 30
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-39 Score=324.06 Aligned_cols=282 Identities=17% Similarity=0.254 Sum_probs=247.6
Q ss_pred CccccCeeEEEEcCCCC-eEEEEEeCCeEEEEeC----CCce------EEEEeec----------cCceeEEEEEccCCC
Q 038802 48 PGLVSSINSIVFSPTTS-HLFAATHSASLTLFSS----QTLE------KHSAISS----------FKDVVTCSSFRPDGS 106 (532)
Q Consensus 48 ~~h~~~V~~i~~sp~~~-~l~~~~~d~~v~i~~~----~~~~------~~~~~~~----------~~~~v~~~~~~~~~~ 106 (532)
..|.++|++++|+|+++ ++++|+.||.|++||+ .+++ ....+.. |.+.|++++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 45669999999999999 9999999999999999 8877 4555544 678999999999999
Q ss_pred EEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEe-------------
Q 038802 107 LLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLD------------- 173 (532)
Q Consensus 107 ~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~------------- 173 (532)
+|++|+.||.|++|| .++..+..+..|...|.+++|+| ++.+|++++.||.|++||+.+++.+..
T Consensus 122 ~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 122 SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINA 199 (425)
T ss_dssp EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEECCC---------
T ss_pred EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceee
Confidence 999999999999999 66788899999999999999999 899999999999999999987765432
Q ss_pred -------------------------------------------ccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEccc
Q 038802 174 -------------------------------------------LFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRV 210 (532)
Q Consensus 174 -------------------------------------------~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~ 210 (532)
+..|...|.+++|+| ++.+|++++.||.|++||+++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~ 278 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND-TNKLLLSASDDGTLRIWHGGN 278 (425)
T ss_dssp ------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEECSSS
T ss_pred ccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCC
Confidence 335778899999999 899999999999999999998
Q ss_pred CCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEE
Q 038802 211 ENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRIL 289 (532)
Q Consensus 211 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~ 289 (532)
++....+. .|...|.+++|+|++ ++++++ |+.|++||+.++ ..+..+..|...+.+++|+|+ +.+++
T Consensus 279 ~~~~~~~~-~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~s~~---------~~~l~ 346 (425)
T 1r5m_A 279 GNSQNCFY-GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN-TLLALSIVDGVPIFAGRISQD---------GQKYA 346 (425)
T ss_dssp BSCSEEEC-CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT-EEEEEEECTTCCEEEEEECTT---------SSEEE
T ss_pred CccceEec-CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC-cEeEecccCCccEEEEEEcCC---------CCEEE
Confidence 66555553 688999999999999 777777 999999999887 788888899999999999998 67999
Q ss_pred EEecCCeEEEEECCCce--------------------EEEeee-cCC--CeeEEEEecCCCEEEEEecCCcEEEEeec
Q 038802 290 SVALDGYMKVFDYGKMK--------------------VTHSMR-FPA--PLMSVAFSPDCMTRVIGTSNGTIFAGRRK 344 (532)
Q Consensus 290 s~~~dg~i~iwd~~~~~--------------------~~~~~~-~~~--~v~~~~~s~~~~~l~~g~~dg~i~iw~~~ 344 (532)
+++.||.|++||+.+++ .+..+. +.. .|++++|+|++++|++|+.||.|++|+++
T Consensus 347 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 347 VAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred EEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 99999999999999887 777777 444 99999999999999999999999999985
No 31
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.1e-40 Score=321.18 Aligned_cols=289 Identities=16% Similarity=0.220 Sum_probs=243.0
Q ss_pred ccCccccCeeEEEEcCCCCeEEE-EEe---CCeEEEEeCCCceEEEEe-eccCceeEEEEEccC---CCEEEEEcCCCCE
Q 038802 46 QIPGLVSSINSIVFSPTTSHLFA-ATH---SASLTLFSSQTLEKHSAI-SSFKDVVTCSSFRPD---GSLLAASDLSGLI 117 (532)
Q Consensus 46 ~~~~h~~~V~~i~~sp~~~~l~~-~~~---d~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~g~~dg~i 117 (532)
.+.+|.++|++++|+|++..+++ |+. |+.|++||+.+++..... ..|...|.+++|+|+ +++|++|+.||.|
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 34679999999999999976654 444 899999999988765443 478999999999998 6999999999999
Q ss_pred EEEECCCCc-eEEEecCCCCCEEEEEe------ecCCCcEEEEEeCCCeEEEEECCCCe-EEEeccCCCC----ceEEEE
Q 038802 118 QVFDVKSRT-PLRRLKSHTRPVRFVKY------PFLDKLHLVSGGDDGIVKFWDVAGES-VVLDLFGHKD----YVRCGD 185 (532)
Q Consensus 118 ~iwd~~~~~-~~~~~~~h~~~i~~~~~------~~~~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~----~v~~i~ 185 (532)
++||+.+++ .+..+.+|...|.++.| +| ++.+|++++.||.|++||+.+++ .+..+..|.+ .+.+++
T Consensus 93 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEeCCCCCccEEEEEecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 999999887 88899999999999965 56 88899999999999999999876 6666655554 888988
Q ss_pred ----EeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEec---CCCEEEEEc-CCeEEEEEccCCCeee
Q 038802 186 ----CSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLP---SGGLIATAG-GNSVKIWDLIGGGKMV 257 (532)
Q Consensus 186 ----~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~---~~~~l~~~~-d~~i~iwd~~~~~~~~ 257 (532)
|+| ++.++++++.||.|++||++++.. .....|...|.+++|+| ++.++++++ ||.|++||+++. ...
T Consensus 172 ~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~ 247 (357)
T 3i2n_A 172 FGNAYNQ-EERVVCAGYDNGDIKLFDLRNMAL--RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ-HPT 247 (357)
T ss_dssp EECCCC--CCCEEEEEETTSEEEEEETTTTEE--EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE-ETT
T ss_pred EEeccCC-CCCEEEEEccCCeEEEEECccCce--eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC-Ccc
Confidence 667 899999999999999999998543 44457889999999999 899999988 899999999865 333
Q ss_pred EE-----ccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc-------------------eEEEeee-
Q 038802 258 YS-----MESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM-------------------KVTHSMR- 312 (532)
Q Consensus 258 ~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-------------------~~~~~~~- 312 (532)
.. +.+|...|++++|+|++ ..++++++.||.|++||+.++ +.+..+.
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~~~~--------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 319 (357)
T 3i2n_A 248 KGFASVSEKAHKSTVWQVRHLPQN--------RELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL 319 (357)
T ss_dssp TEEEEEEEECCSSCEEEEEEETTE--------EEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC
T ss_pred cceeeeccCCCcCCEEEEEECCCC--------CcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc
Confidence 33 34899999999999984 338999999999999998753 3455555
Q ss_pred cCCCeeEEEEecCCCEEE-EEecCCcEEEEeecCcc
Q 038802 313 FPAPLMSVAFSPDCMTRV-IGTSNGTIFAGRRKKKE 347 (532)
Q Consensus 313 ~~~~v~~~~~s~~~~~l~-~g~~dg~i~iw~~~~~~ 347 (532)
|..+|++++|+|+|++|+ +|+.||.|++|++.+.+
T Consensus 320 ~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 320 STQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 788999999999999998 89999999999998654
No 32
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.1e-40 Score=323.18 Aligned_cols=288 Identities=13% Similarity=0.134 Sum_probs=248.5
Q ss_pred CccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCce--EEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCC
Q 038802 48 PGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLE--KHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSR 125 (532)
Q Consensus 48 ~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 125 (532)
..|.++|++++|+|+++++++++.|+.|++||..+++ ....+.+|...|.+++|+|++++|++|+.||.|++||+.++
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC
Confidence 4588999999999999999999999999999999887 88889999999999999999999999999999999999888
Q ss_pred ceEEE--ecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCe----EEEeccCCCCceEEEEEeCCCCCEEEEEeC
Q 038802 126 TPLRR--LKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGES----VVLDLFGHKDYVRCGDCSPVNGDMFVTGSY 199 (532)
Q Consensus 126 ~~~~~--~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~----~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~ 199 (532)
+.... +..|...|.+++|+| ++.++++++.||.|++||++.+. .......|...|.+++|+| ++++|++|+.
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~ 162 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP-NSVLLAAGSC 162 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT-TSSEEEEEET
T ss_pred eeeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC-CCCEEEEEcC
Confidence 65444 467999999999999 89999999999999999998876 2333467899999999999 9999999999
Q ss_pred CCeEEEEEcc------------------cCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEc
Q 038802 200 DHTVKLWDVR------------------VENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSM 260 (532)
Q Consensus 200 dg~i~iwd~~------------------~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~ 260 (532)
||.|++||++ .+.....+ ..|...|.+++|+|++.++++++ |+.|++||++++ +++..+
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~ 240 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES-SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK-MAVATL 240 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC-CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT-TEEEEE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEec-CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC-ceeEEE
Confidence 9999999964 22222222 27888999999999999999998 899999999987 778888
Q ss_pred cCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC--ceE--E----------------------------
Q 038802 261 ESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK--MKV--T---------------------------- 308 (532)
Q Consensus 261 ~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~--~---------------------------- 308 (532)
..|...|.+++|+|+ +.+++++ .||.|++|++.+ ++. +
T Consensus 241 ~~~~~~v~~~~~~~~---------~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (372)
T 1k8k_C 241 ASETLPLLAVTFITE---------SSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKAS 310 (372)
T ss_dssp ECSSCCEEEEEEEET---------TEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-
T ss_pred ccCCCCeEEEEEecC---------CCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccc
Confidence 899999999999998 5666666 999999999987 421 0
Q ss_pred --------Eee--ecCCCeeEEEEe-cCC---CEEEEEecCCcEEEEeecCcccc
Q 038802 309 --------HSM--RFPAPLMSVAFS-PDC---MTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 309 --------~~~--~~~~~v~~~~~s-~~~---~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
..+ .|..+|++++|. ++| .+|++|+.||.|++|++.+.+..
T Consensus 311 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 311 SEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESA 365 (372)
T ss_dssp --------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHHH
T ss_pred cccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhHh
Confidence 112 477899999966 666 99999999999999999887654
No 33
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.6e-40 Score=321.84 Aligned_cols=289 Identities=17% Similarity=0.244 Sum_probs=248.8
Q ss_pred cCccccCeeEEEEcCC----CCeEEEEEeCCeEEEEeCCCceEEEEeec-----cCceeEEEEEccC----CCEEEEEcC
Q 038802 47 IPGLVSSINSIVFSPT----TSHLFAATHSASLTLFSSQTLEKHSAISS-----FKDVVTCSSFRPD----GSLLAASDL 113 (532)
Q Consensus 47 ~~~h~~~V~~i~~sp~----~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~g~~ 113 (532)
..+|.++|++++|+|+ ...+++++.++.|++||..+++.+..+.. |...|++++|+|+ +.+|++|+.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 3589999999999994 45677888889999999998877776654 4578999999998 679999999
Q ss_pred CCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec---cCCCCceEEEEEeCCC
Q 038802 114 SGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL---FGHKDYVRCGDCSPVN 190 (532)
Q Consensus 114 dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~~~v~~i~~~~~~ 190 (532)
||.|++||+.+++.+..+.+|...|.+++|+|.++.+|++|+.||.|++||+++++.+..+ .+|...|.+++|+| +
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 172 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL-L 172 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT-T
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC-C
Confidence 9999999999999999999999999999999877889999999999999999999998887 78999999999999 9
Q ss_pred CCEEEEEeCCCeEEEEEcccCCceeEE---------------------------EecCCCcEEEEEEecCCCEEEEEc-C
Q 038802 191 GDMFVTGSYDHTVKLWDVRVENSKSVM---------------------------EVNHGKPIEDVMFLPSGGLIATAG-G 242 (532)
Q Consensus 191 ~~~l~s~s~dg~i~iwd~~~~~~~~~~---------------------------~~~~~~~v~~i~~~~~~~~l~~~~-d 242 (532)
+.+|++++.||.|++||+++++..... ...|...|.+++|+ +.++++++ |
T Consensus 173 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d 250 (366)
T 3k26_A 173 GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCE 250 (366)
T ss_dssp SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSS
T ss_pred CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecC
Confidence 999999999999999999864322111 11288999999998 67888888 9
Q ss_pred CeEEEEEccCCC-------------eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCce---
Q 038802 243 NSVKIWDLIGGG-------------KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMK--- 306 (532)
Q Consensus 243 ~~i~iwd~~~~~-------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--- 306 (532)
+.|++||+.+.. ..+..+..|...|++++|+|+.. +.+|++++.||.|++||+.+++
T Consensus 251 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-------~~~l~~~~~dg~i~vwd~~~~~~~~ 323 (366)
T 3k26_A 251 NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFW-------QKMLALGNQVGKLYVWDLEVEDPHK 323 (366)
T ss_dssp SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTT-------SSEEEEECTTSCEEEEECCSSSGGG
T ss_pred CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCC-------CcEEEEEecCCcEEEEECCCCCCcc
Confidence 999999997653 24677788999999999999831 4689999999999999999864
Q ss_pred -EEEeee-c--CCCeeEEEEecCCCEEEEEecCCcEEEEeecC
Q 038802 307 -VTHSMR-F--PAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKK 345 (532)
Q Consensus 307 -~~~~~~-~--~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~ 345 (532)
....+. | ..+|++++|+|++++|++|+.||.|++|++.+
T Consensus 324 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 324 AKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp CEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred ccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 334454 3 68999999999999999999999999999853
No 34
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.9e-39 Score=333.97 Aligned_cols=296 Identities=24% Similarity=0.394 Sum_probs=262.6
Q ss_pred CCCCCcccccccCC--CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEE
Q 038802 31 SQTPESKYWSSFKP--HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLL 108 (532)
Q Consensus 31 ~~~~~~~~w~~~~~--~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 108 (532)
..++.+++|+.-.. ..+.+|...|++++|+|+++.+++++.|+.|++||. +++....+.+|...|.+++|+|++++|
T Consensus 240 ~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l 318 (577)
T 2ymu_A 240 SDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTI 318 (577)
T ss_dssp ETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred eCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEE
Confidence 46778899984322 345889999999999999999999999999999996 467788899999999999999999999
Q ss_pred EEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeC
Q 038802 109 AASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSP 188 (532)
Q Consensus 109 ~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~ 188 (532)
++++.||.|++||... ..+..+.+|...|.+++|+| ++.++++|+.||.|++||. +++.+..+.+|...|++++|+|
T Consensus 319 ~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~ 395 (577)
T 2ymu_A 319 ASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP 395 (577)
T ss_dssp EEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECT
T ss_pred EEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECC
Confidence 9999999999999764 55677889999999999999 9999999999999999995 5678888899999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcce
Q 038802 189 VNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTV 267 (532)
Q Consensus 189 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i 267 (532)
++++|++++.|+.|++||... +... ....|...|.+++|+|+++++++++ |+.|++||.. + +.+..+.+|...|
T Consensus 396 -dg~~l~~~~~d~~v~~~~~~~-~~~~-~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~-~~~~~~~~~~~~v 470 (577)
T 2ymu_A 396 -DGQTIASASDDKTVKLWNRNG-QLLQ-TLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-G-QLLQTLTGHSSSV 470 (577)
T ss_dssp -TSSCEEEEETTSEEEEECTTC-CEEE-EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-S-CEEEEEECCSSCE
T ss_pred -CCCEEEEEeCCCEEEEEeCCC-CEEE-EecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-C-CEEEEEcCCCCCE
Confidence 999999999999999999643 3333 3347899999999999999999998 8999999964 3 6778888999999
Q ss_pred EEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEeecC
Q 038802 268 TSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKK 345 (532)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~ 345 (532)
.+++|+|+ +.+|++++.|+.|++||. +++++..+. |...|++++|+|+|++|++|+.||.|++|+...
T Consensus 471 ~~~~~spd---------~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 471 RGVAFSPD---------GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp EEEEECTT---------SCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred EEEEEcCC---------CCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 99999999 689999999999999995 566676666 888999999999999999999999999999643
No 35
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.6e-39 Score=312.69 Aligned_cols=259 Identities=21% Similarity=0.333 Sum_probs=232.7
Q ss_pred CCCCCCcccccccCCC---ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCc----eEEEEeeccCceeEEEEEc
Q 038802 30 LSQTPESKYWSSFKPH---QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTL----EKHSAISSFKDVVTCSSFR 102 (532)
Q Consensus 30 ~~~~~~~~~w~~~~~~---~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~----~~~~~~~~~~~~v~~~~~~ 102 (532)
.+.++.+++|+..... .+..|...|.+++|+|+++++++|+.|+.|++|++.+. .....+.+|.+.|.++.|+
T Consensus 73 ~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 152 (340)
T 1got_B 73 ASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152 (340)
T ss_dssp EETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEE
T ss_pred EeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEEC
Confidence 4678899999976543 35789999999999999999999999999999999764 4566788999999999999
Q ss_pred cCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceE
Q 038802 103 PDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVR 182 (532)
Q Consensus 103 ~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~ 182 (532)
+++. +++|+.||+|++||+.+++.+..+.+|.+.|.+++|+| ++.++++|+.|+.|++||++++.+...+.+|...|+
T Consensus 153 ~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~ 230 (340)
T 1got_B 153 DDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 230 (340)
T ss_dssp ETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEE
T ss_pred CCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEE
Confidence 8875 88899999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred EEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEe-cCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEc
Q 038802 183 CGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEV-NHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSM 260 (532)
Q Consensus 183 ~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~ 260 (532)
+++|+| ++++|++|+.||+|++||+++......+.. .+...|.+++|+|+|.++++++ |+.|++||+.+. ..+..+
T Consensus 231 ~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~-~~~~~~ 308 (340)
T 1got_B 231 AICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA-DRAGVL 308 (340)
T ss_dssp EEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEE
T ss_pred EEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC-cEeeEe
Confidence 999999 999999999999999999987544433321 2335799999999999999998 899999999877 778888
Q ss_pred cCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEE
Q 038802 261 ESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFD 301 (532)
Q Consensus 261 ~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd 301 (532)
.+|...|.+++|+|+ +.+|++|+.||.|++||
T Consensus 309 ~~h~~~v~~~~~s~d---------g~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 309 AGHDNRVSCLGVTDD---------GMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ECCSSCEEEEEECTT---------SSCEEEEETTSCEEEEC
T ss_pred ecCCCcEEEEEEcCC---------CCEEEEEcCCccEEecC
Confidence 999999999999999 67899999999999997
No 36
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-39 Score=324.35 Aligned_cols=302 Identities=12% Similarity=0.091 Sum_probs=256.4
Q ss_pred CCCCCcccccccCCC---ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCE
Q 038802 31 SQTPESKYWSSFKPH---QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSL 107 (532)
Q Consensus 31 ~~~~~~~~w~~~~~~---~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 107 (532)
..++.+++|+..... .+..| ..+....|+|+++++++|+.||.|++||+.+++....+.+|.+.|++++|+|++++
T Consensus 75 ~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 153 (420)
T 3vl1_A 75 RLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEA 153 (420)
T ss_dssp EETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSE
T ss_pred EcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCE
Confidence 456788999865432 23344 44555578999999999999999999999999998888899999999999999999
Q ss_pred EEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccC---CCCceEEE
Q 038802 108 LAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFG---HKDYVRCG 184 (532)
Q Consensus 108 l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~~v~~i 184 (532)
|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.||.|++||+++++.+..+.. |...+.++
T Consensus 154 l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~ 232 (420)
T 3vl1_A 154 LISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSI 232 (420)
T ss_dssp EEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEE
T ss_pred EEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEE
Confidence 99999999999999999999999999999999999999 899999999999999999999999888864 44445554
Q ss_pred E---------------------EeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCC-EEEEEc-
Q 038802 185 D---------------------CSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGG-LIATAG- 241 (532)
Q Consensus 185 ~---------------------~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~~- 241 (532)
+ |+| ++.++++|+.||.|++||++++.........|...|.+++|+|++. ++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~ 311 (420)
T 3vl1_A 233 ALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE 311 (420)
T ss_dssp EEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEET
T ss_pred EEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeC
Confidence 4 567 7889999999999999999987766666667889999999999998 888888
Q ss_pred CCeEEEEEccCCCeeeEEccC-CCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc----------eEEEe
Q 038802 242 GNSVKIWDLIGGGKMVYSMES-HNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM----------KVTHS 310 (532)
Q Consensus 242 d~~i~iwd~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----------~~~~~ 310 (532)
||.|++||++++..++..+.. |...+.++.+ ++ +.++++++.||.|++||+.+. .....
T Consensus 312 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~---------~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~ 381 (420)
T 3vl1_A 312 NGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AA---------GALFVSSGFDTSIKLDIISDPESERPAIEFETPTFL 381 (420)
T ss_dssp TSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ET---------TEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEE
T ss_pred CCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CC---------CCEEEEecCCccEEEEeccCCCCCccceeccCccEE
Confidence 899999999987565666666 6677878755 45 568999999999999998762 22233
Q ss_pred eecCCCeeEEEEecCCC---EEEEEecCCcEEEEeecC
Q 038802 311 MRFPAPLMSVAFSPDCM---TRVIGTSNGTIFAGRRKK 345 (532)
Q Consensus 311 ~~~~~~v~~~~~s~~~~---~l~~g~~dg~i~iw~~~~ 345 (532)
..+...|.+++|+|++. .+++++.+|.+.+|++..
T Consensus 382 ~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 382 VSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 34778999999999999 788888899999999864
No 37
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.3e-39 Score=316.98 Aligned_cols=285 Identities=22% Similarity=0.356 Sum_probs=243.7
Q ss_pred cCccccCe--eEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeec-cCceeEEEEEccCCCEEEEEcCCCCEEEEECC
Q 038802 47 IPGLVSSI--NSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISS-FKDVVTCSSFRPDGSLLAASDLSGLIQVFDVK 123 (532)
Q Consensus 47 ~~~h~~~V--~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 123 (532)
.++|...+ .+++|++ ..+++++.|+.|++||..+++....+.. |...|++++|+|++++|++|+.||.|++||+.
T Consensus 87 ~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 87 APGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp CTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc
Confidence 35666654 4566664 5688999999999999999988877766 78999999999999999999999999999999
Q ss_pred CCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECC-CCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCe
Q 038802 124 SRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVA-GESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHT 202 (532)
Q Consensus 124 ~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~ 202 (532)
+++.+..+.+|...|.+++|+ +..+++|+.||.|++||++ .+..+..+.+|...|.+++|+| ++.+|++|+.||.
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~ 240 (401)
T 4aez_A 165 SQTKLRTMAGHQARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNV 240 (401)
T ss_dssp TCCEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSC
T ss_pred CCeEEEEecCCCCceEEEEEC---CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC-CCCEEEEEeCCCe
Confidence 999999999999999999994 4689999999999999998 5667888889999999999999 9999999999999
Q ss_pred EEEEEcccCCceeEEEecCCCcEEEEEEecCC-CEEEEEc---CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCC
Q 038802 203 VKLWDVRVENSKSVMEVNHGKPIEDVMFLPSG-GLIATAG---GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNE 278 (532)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 278 (532)
|++||+++........ .|...|.+++|+|++ .++++++ |+.|++||+.++ .++..+. +...+.+++|+|+
T Consensus 241 v~iwd~~~~~~~~~~~-~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~-~~~~~~~-~~~~v~~~~~s~~--- 314 (401)
T 4aez_A 241 VQIWDARSSIPKFTKT-NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG-ARVNTVD-AGSQVTSLIWSPH--- 314 (401)
T ss_dssp EEEEETTCSSEEEEEC-CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC-CEEEEEE-CSSCEEEEEECSS---
T ss_pred EEEccCCCCCccEEec-CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC-CEEEEEe-CCCcEEEEEECCC---
Confidence 9999999855544443 788999999999966 5666654 899999999887 6666664 6678999999999
Q ss_pred CCccccccEEEE--EecCCeEEEEECCCceEEEee---ecCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 279 SGEEAMQYRILS--VALDGYMKVFDYGKMKVTHSM---RFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 279 ~~~~~~~~~l~s--~~~dg~i~iwd~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+.++++ |+.||.|++||+.++...... .|...|.+++|+|+|.+|++|+.||.|++|++.+++..
T Consensus 315 ------~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 315 ------SKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp ------SSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred ------CCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 567777 448999999999987665543 27789999999999999999999999999999887654
No 38
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.9e-38 Score=320.36 Aligned_cols=284 Identities=20% Similarity=0.325 Sum_probs=254.6
Q ss_pred ccCccccCe-eEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC
Q 038802 46 QIPGLVSSI-NSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS 124 (532)
Q Consensus 46 ~~~~h~~~V-~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 124 (532)
.+.+|.+.| +++.+ +++++++|+.||.|++||+.+++....+.+|.+.|++++|+|++ ++++|+.||+|++||+.+
T Consensus 116 ~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT
T ss_pred EEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC
Confidence 568898885 66666 46699999999999999999999999999999999999999988 999999999999999999
Q ss_pred CceEEEecCCCCCEEEEEeec-CCCcEEEEEeCCCeEEEEECCCCe-----------------------EEEeccCCCCc
Q 038802 125 RTPLRRLKSHTRPVRFVKYPF-LDKLHLVSGGDDGIVKFWDVAGES-----------------------VVLDLFGHKDY 180 (532)
Q Consensus 125 ~~~~~~~~~h~~~i~~~~~~~-~~~~~l~s~s~dg~i~iwd~~~~~-----------------------~~~~~~~~~~~ 180 (532)
++.+..+.+|.+.|.+++|++ .++.++++|+.||.|++||+.++. .+..+.+|...
T Consensus 193 ~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (464)
T 3v7d_B 193 GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS 272 (464)
T ss_dssp TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSC
T ss_pred CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccce
Confidence 999999999999999999985 267899999999999999998765 25567789999
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEE
Q 038802 181 VRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYS 259 (532)
Q Consensus 181 v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~ 259 (532)
|.++ ++ +++++++|+.||.|++||+++++....+. .|...|.+++|+|++.++++++ |+.|++||+.++ +++..
T Consensus 273 v~~~--~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~-~~~~~ 347 (464)
T 3v7d_B 273 VRTV--SG-HGNIVVSGSYDNTLIVWDVAQMKCLYILS-GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG-ELMYT 347 (464)
T ss_dssp EEEE--EE-ETTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT-EEEEE
T ss_pred EEEE--cC-CCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-cEEEE
Confidence 8887 45 67999999999999999999865544443 6899999999999999999998 899999999887 88999
Q ss_pred ccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCcEE
Q 038802 260 MESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIF 339 (532)
Q Consensus 260 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~ 339 (532)
+.+|...|.++.+++ .++++++.||.|++||+.++.......+...+..++|+|+++++++|+ ||.|+
T Consensus 348 ~~~h~~~v~~~~~~~-----------~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~ 415 (464)
T 3v7d_B 348 LQGHTALVGLLRLSD-----------KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFN 415 (464)
T ss_dssp ECCCSSCEEEEEECS-----------SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEE
T ss_pred EeCCCCcEEEEEEcC-----------CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEE
Confidence 999999999999973 489999999999999999998888888888999999999999999998 99999
Q ss_pred EEeecCcccc
Q 038802 340 AGRRKKKENV 349 (532)
Q Consensus 340 iw~~~~~~~~ 349 (532)
+|++.+++..
T Consensus 416 iwd~~~g~~~ 425 (464)
T 3v7d_B 416 IYNLRSGKLV 425 (464)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCcEE
Confidence 9999988765
No 39
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-39 Score=326.65 Aligned_cols=291 Identities=14% Similarity=0.167 Sum_probs=240.3
Q ss_pred cccccCC--Ccc-CccccCeeEEEEcC-CCCeEEEEEeCCeEEEEeCCC---ce---EEEEeeccCceeEEEEEccCCCE
Q 038802 38 YWSSFKP--HQI-PGLVSSINSIVFSP-TTSHLFAATHSASLTLFSSQT---LE---KHSAISSFKDVVTCSSFRPDGSL 107 (532)
Q Consensus 38 ~w~~~~~--~~~-~~h~~~V~~i~~sp-~~~~l~~~~~d~~v~i~~~~~---~~---~~~~~~~~~~~v~~~~~~~~~~~ 107 (532)
.|+.-.. ..+ .+|.++|++++|+| ++++|++|+.||.|++||+.+ +. ....+ .|...|++++|+|++++
T Consensus 47 ~w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~ 125 (437)
T 3gre_A 47 MGNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDA 125 (437)
T ss_dssp GGGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSE
T ss_pred cccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCE
Confidence 5763221 234 78999999999999 999999999999999999866 32 22222 58999999999999999
Q ss_pred EEEEcCCCCEEEEECC---CCceEEEecC------------CCCCEEEEE--eecCCCcEEEEEeCCCeEEEEECCCCeE
Q 038802 108 LAASDLSGLIQVFDVK---SRTPLRRLKS------------HTRPVRFVK--YPFLDKLHLVSGGDDGIVKFWDVAGESV 170 (532)
Q Consensus 108 l~~g~~dg~i~iwd~~---~~~~~~~~~~------------h~~~i~~~~--~~~~~~~~l~s~s~dg~i~iwd~~~~~~ 170 (532)
|++|+.||.|++||+. +++....+.+ +...+.++. +++ ++.++++|+.||.|++||+++++.
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~ 204 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLER 204 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCee
Confidence 9999999999999994 5544443322 556677776 446 788999999999999999999999
Q ss_pred EEeccC--CCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEec----CCCEEEEEc-CC
Q 038802 171 VLDLFG--HKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLP----SGGLIATAG-GN 243 (532)
Q Consensus 171 ~~~~~~--~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~----~~~~l~~~~-d~ 243 (532)
+..+.+ |...|++++|+| ++.+|++|+.||+|++||++++.....+...|..+|.+++|+| ++.++++++ |+
T Consensus 205 ~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg 283 (437)
T 3gre_A 205 LQIIENSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKT 283 (437)
T ss_dssp EEEEECCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTE
T ss_pred eEEEccCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCC
Confidence 999988 899999999999 8999999999999999999986665665557888999996665 677999998 89
Q ss_pred eEEEEEccCCCeeeEEccC--------------------------CCcceEEEEEeccCCCCCccccccEEEEEecCCeE
Q 038802 244 SVKIWDLIGGGKMVYSMES--------------------------HNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYM 297 (532)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~--------------------------~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i 297 (532)
.|++||+.++ .++..+.+ |...|++++|+ + +.+|++|+.||.|
T Consensus 284 ~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~---------~~~l~s~~~d~~i 352 (437)
T 3gre_A 284 FLTIWNFVKG-HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N---------DKILLTDEATSSI 352 (437)
T ss_dssp EEEEEETTTT-EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T---------TEEEEEEGGGTEE
T ss_pred cEEEEEcCCC-cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C---------ceEEEecCCCCeE
Confidence 9999999877 55555543 55667788887 4 5789999999999
Q ss_pred EEEECCCceEEEeee--------------------------------------cCCCeeEEEEecC--CCEEEEEecCCc
Q 038802 298 KVFDYGKMKVTHSMR--------------------------------------FPAPLMSVAFSPD--CMTRVIGTSNGT 337 (532)
Q Consensus 298 ~iwd~~~~~~~~~~~--------------------------------------~~~~v~~~~~s~~--~~~l~~g~~dg~ 337 (532)
++||+.+++....+. |...|++++|+++ +.+|++|+.||.
T Consensus 353 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~ 432 (437)
T 3gre_A 353 VMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGL 432 (437)
T ss_dssp EEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSC
T ss_pred EEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCce
Confidence 999999876554443 6789999999998 789999999999
Q ss_pred EEEEe
Q 038802 338 IFAGR 342 (532)
Q Consensus 338 i~iw~ 342 (532)
|++|+
T Consensus 433 I~iw~ 437 (437)
T 3gre_A 433 IGIFQ 437 (437)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99995
No 40
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-40 Score=328.52 Aligned_cols=290 Identities=16% Similarity=0.243 Sum_probs=251.6
Q ss_pred cccCeeEEEEcCCCC-eEEEE----------EeCCeEEEEeCCCce---EEEEeeccCceeEEEEEccCCCEEEEEcCCC
Q 038802 50 LVSSINSIVFSPTTS-HLFAA----------THSASLTLFSSQTLE---KHSAISSFKDVVTCSSFRPDGSLLAASDLSG 115 (532)
Q Consensus 50 h~~~V~~i~~sp~~~-~l~~~----------~~d~~v~i~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg 115 (532)
+...|.+++|+|+++ +++++ +.|+.|++||+.++. .... ..|...|++++|+|++++|++|+.||
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS-LQVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC-CCCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE-EecCCceEEEEECCCCCeEEEEccCC
Confidence 445789999999987 88888 789999999998875 3333 35789999999999999999999999
Q ss_pred CEEEEECCC----CceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCe------EEE---eccCCCCceE
Q 038802 116 LIQVFDVKS----RTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGES------VVL---DLFGHKDYVR 182 (532)
Q Consensus 116 ~i~iwd~~~----~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~------~~~---~~~~~~~~v~ 182 (532)
.|++||+.+ ...+..+.+|...|.+++|+|.++.+|++++.||.|++||+.+++ ... ....|...|.
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 169 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence 999999987 457888999999999999999338999999999999999999876 332 2367999999
Q ss_pred EEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecC-----CCcEEEEEEecCC-CEEEEEc-CC---eEEEEEccC
Q 038802 183 CGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNH-----GKPIEDVMFLPSG-GLIATAG-GN---SVKIWDLIG 252 (532)
Q Consensus 183 ~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----~~~v~~i~~~~~~-~~l~~~~-d~---~i~iwd~~~ 252 (532)
+++|+|..+.++++++.||.|++||+++++....+.... ...|.+++|+|++ .++++++ |+ .|++||+++
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN 249 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC
Confidence 999999338899999999999999999865555544322 7889999999997 5888887 77 999999998
Q ss_pred CCeeeEEcc-CCCcceEEEEEec-cCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCC-CE
Q 038802 253 GGKMVYSME-SHNKTVTSVCVGR-VGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDC-MT 328 (532)
Q Consensus 253 ~~~~~~~~~-~~~~~i~~~~~~~-~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~-~~ 328 (532)
...+...+. +|...|.+++|+| + +.++++++.||.|++||+.+++.+..+. |...|.+++|+|++ .+
T Consensus 250 ~~~~~~~~~~~~~~~v~~~~~s~~~---------~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 320 (416)
T 2pm9_A 250 ANTPLQTLNQGHQKGILSLDWCHQD---------EHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDL 320 (416)
T ss_dssp TTSCSBCCCSCCSSCEEEEEECSSC---------SSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTE
T ss_pred CCCCcEEeecCccCceeEEEeCCCC---------CCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCE
Confidence 756777787 8999999999999 5 6789999999999999999999998887 78899999999999 89
Q ss_pred EEEEecCCcEEEEeecCcccc
Q 038802 329 RVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 329 l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+++++.||.|++|++.+....
T Consensus 321 l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 321 FACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp EEECCSSSEEEEEESCCCCCS
T ss_pred EEEEecCCcEEEEEccCCCCC
Confidence 999999999999999887543
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=8.6e-40 Score=327.13 Aligned_cols=288 Identities=18% Similarity=0.186 Sum_probs=230.3
Q ss_pred cCccccCeeEEEEcCC-CCeEEEEEeCCeEEEEeCCCceE--EEEeeccCceeEEEEEcc-CCCEEEEEcCCCCEEEEEC
Q 038802 47 IPGLVSSINSIVFSPT-TSHLFAATHSASLTLFSSQTLEK--HSAISSFKDVVTCSSFRP-DGSLLAASDLSGLIQVFDV 122 (532)
Q Consensus 47 ~~~h~~~V~~i~~sp~-~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~g~~dg~i~iwd~ 122 (532)
..+|...|+|++|+|. +.+||+|+.||.|+|||+.++.. ...+.+|.+.|++++|+| ++.+|++|+.||+|++||+
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~ 194 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF 194 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence 3568889999999995 56899999999999999977654 444568999999999998 7899999999999999999
Q ss_pred CCCceEEEec--CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCC
Q 038802 123 KSRTPLRRLK--SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYD 200 (532)
Q Consensus 123 ~~~~~~~~~~--~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~d 200 (532)
+++....... .+...+.+++|+| ++.+|++|+.||.|++||++ ++.+..+.+|...|.+++|+|....++++|+.|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 195 KGNILRVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp TSCEEEEEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred cCCceeEEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCc
Confidence 8765433333 3445678999999 99999999999999999986 456677889999999999999445689999999
Q ss_pred CeEEEEEcccCCceeEE--EecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCc------ceEEEE
Q 038802 201 HTVKLWDVRVENSKSVM--EVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNK------TVTSVC 271 (532)
Q Consensus 201 g~i~iwd~~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~------~i~~~~ 271 (532)
++|++||+++....... ...|..+|.+++|+|+|.+|++++ |+.|++||+.++ .....+..|.. .+....
T Consensus 273 ~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 351 (435)
T 4e54_B 273 QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW-DCPLGLIPHPHRHFQHLTPIKAA 351 (435)
T ss_dssp SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS-SSEEEECCCCCCCCSSSCCCBCE
T ss_pred ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC-ccceEEecccccccccceeEEEE
Confidence 99999999876544332 347899999999999999999999 999999999887 44444444432 233455
Q ss_pred EeccCCCCCccccccEEEEE------------ecCCeEEEEECCCceEEEeee--cCCCeeEE-EEecCCCEEEEEecCC
Q 038802 272 VGRVGNESGEEAMQYRILSV------------ALDGYMKVFDYGKMKVTHSMR--FPAPLMSV-AFSPDCMTRVIGTSNG 336 (532)
Q Consensus 272 ~~~~~~~~~~~~~~~~l~s~------------~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~-~~s~~~~~l~~g~~dg 336 (532)
|+|++ .+++++ ..++.|++||..+++++..+. |...|.++ +|+|+|.+|++|+ |+
T Consensus 352 ~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~ 421 (435)
T 4e54_B 352 WHPRY---------NLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GY 421 (435)
T ss_dssp ECSSS---------SCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SS
T ss_pred EcCCC---------CEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CC
Confidence 66653 333333 234679999999999988764 66788887 6999999999876 88
Q ss_pred cEEEEeecCcc
Q 038802 337 TIFAGRRKKKE 347 (532)
Q Consensus 337 ~i~iw~~~~~~ 347 (532)
.|+||++.+++
T Consensus 422 ~i~iW~~~~gk 432 (435)
T 4e54_B 422 HILIWSQQEAR 432 (435)
T ss_dssp EEEECCCC---
T ss_pred cEEEEECCcCe
Confidence 99999998764
No 42
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.8e-38 Score=303.84 Aligned_cols=264 Identities=17% Similarity=0.270 Sum_probs=232.5
Q ss_pred CCCCCCCCcccccccC--------CCccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEE
Q 038802 28 RNLSQTPESKYWSSFK--------PHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCS 99 (532)
Q Consensus 28 ~~~~~~~~~~~w~~~~--------~~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~ 99 (532)
...+.++.+++|+.-. ...+.+|...|++++|+|+++++++|+.|+.|++||+.+++....+.+|...|.++
T Consensus 34 ~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~ 113 (319)
T 3frx_A 34 LSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSV 113 (319)
T ss_dssp EEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred EEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEE
Confidence 3456889999998532 23568999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecC-----CCcEEEEEeCCCeEEEEECCCCeEEEec
Q 038802 100 SFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFL-----DKLHLVSGGDDGIVKFWDVAGESVVLDL 174 (532)
Q Consensus 100 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~-----~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 174 (532)
+|+|++.+|++|+.||+|++||+. +.++..+.+|...|.++.|.|. ++..+++++.|+.|++||+++.+....+
T Consensus 114 ~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 192 (319)
T 3frx_A 114 DIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF 192 (319)
T ss_dssp EECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee
Confidence 999999999999999999999986 5678888999999999999883 2348999999999999999999999999
Q ss_pred cCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCC
Q 038802 175 FGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGG 254 (532)
Q Consensus 175 ~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~ 254 (532)
.+|...|.+++|+| ++.+|++|+.||+|++||+++.+.. ....+...|.+++|+|++.++++++++.+++|++...
T Consensus 193 ~~h~~~v~~~~~sp-~g~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~- 268 (319)
T 3frx_A 193 IGHNSNINTLTASP-DGTLIASAGKDGEIMLWNLAAKKAM--YTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQ- 268 (319)
T ss_dssp CCCCSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEE--EEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTE-
T ss_pred cCCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEE--EEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcC-
Confidence 99999999999999 9999999999999999999885443 3445567899999999999999999888999998765
Q ss_pred eeeEEcc--------CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc
Q 038802 255 KMVYSME--------SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM 305 (532)
Q Consensus 255 ~~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 305 (532)
..+..+. .|...+.+++|+|+ +.+|++|+.||.|++||+.+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~v~~~~~spd---------g~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 269 YLVDDLRPEFAGYSKAAEPHAVSLAWSAD---------GQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEEECCCCTTCCGGGCCCEEEEEECTT---------SSEEEEEETTSCEEEEEEEEC
T ss_pred eeeeccCccccccccCcCcceeEEEECCC---------CCEEEEeecCceEEEEEEeec
Confidence 4444443 34567899999999 689999999999999998653
No 43
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-40 Score=326.37 Aligned_cols=284 Identities=14% Similarity=0.157 Sum_probs=230.5
Q ss_pred CccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCc--eEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCC
Q 038802 48 PGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTL--EKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSR 125 (532)
Q Consensus 48 ~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 125 (532)
..|.++|++++|+|+++++++|+.|+.|++||+.++ +....+.+|...|++++|+|++++|++|+.||+|++||+.++
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-----
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Confidence 346779999999999999999999999999999988 778888999999999999999999999999999999999987
Q ss_pred c---eEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCe---EEEeccC-CCCceEEEEEeCCCCCEEEEEe
Q 038802 126 T---PLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGES---VVLDLFG-HKDYVRCGDCSPVNGDMFVTGS 198 (532)
Q Consensus 126 ~---~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~---~~~~~~~-~~~~v~~i~~~~~~~~~l~s~s 198 (532)
. ....+.+|...|.+++|+| ++.+|++|+.|+.|++||+++++ ....+.. |...|.+++|+| ++++|++|+
T Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~ 165 (377)
T 3dwl_C 88 GTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP-NNVLLAAGC 165 (377)
T ss_dssp -CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT-TSSEEEEEE
T ss_pred CceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC-CCCEEEEEe
Confidence 6 6777888999999999999 89999999999999999999877 3666776 999999999999 999999999
Q ss_pred CCCeEEEEEcccCC----------------ceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCe---eeE
Q 038802 199 YDHTVKLWDVRVEN----------------SKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGK---MVY 258 (532)
Q Consensus 199 ~dg~i~iwd~~~~~----------------~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~---~~~ 258 (532)
.|++|++||++... ........|...|.+++|+|++++|++++ |+.|++||+.++.. .+.
T Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 245 (377)
T 3dwl_C 166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALI 245 (377)
T ss_dssp SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECC
T ss_pred CCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeE
Confidence 99999999986321 12222237899999999999999999998 89999999988733 167
Q ss_pred EccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCce------------------------------EE
Q 038802 259 SMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMK------------------------------VT 308 (532)
Q Consensus 259 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~------------------------------~~ 308 (532)
.+.+|...|.+++|+|+ +.+|++++.++.+ +|+..... ..
T Consensus 246 ~~~~~~~~v~~~~~s~~---------~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (377)
T 3dwl_C 246 TVKLSQLPLRSLLWANE---------SAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPV 315 (377)
T ss_dssp CEECSSSCEEEEEEEET---------TEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC----
T ss_pred eecCCCCceEEEEEcCC---------CCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccc
Confidence 78899999999999999 6788888766665 66654211 00
Q ss_pred ------Eee-----------------ecCCCeeEEEEecCC-C---EEEEEecCCcEEEEee
Q 038802 309 ------HSM-----------------RFPAPLMSVAFSPDC-M---TRVIGTSNGTIFAGRR 343 (532)
Q Consensus 309 ------~~~-----------------~~~~~v~~~~~s~~~-~---~l~~g~~dg~i~iw~~ 343 (532)
..+ .|...|+++++.+.+ . .+++|+.||.|++|++
T Consensus 316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 316 SFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ---------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 001 177889999976543 3 6999999999999985
No 44
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.2e-38 Score=344.76 Aligned_cols=291 Identities=19% Similarity=0.293 Sum_probs=265.6
Q ss_pred CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC
Q 038802 45 HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS 124 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 124 (532)
+.+.+|.+.|++++|+|+++++++++.+|.|++||..+++....+.+|...|++++|+|++++|++|+.||.|++||+.+
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~ 86 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT 86 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC-eEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeE
Q 038802 125 RTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE-SVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTV 203 (532)
Q Consensus 125 ~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i 203 (532)
++.+..+.+|.+.|++++|+| ++.++++++.||.|++||+.++ .....+.+|...|.+++|+|.++..+++++.||+|
T Consensus 87 ~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 87 GEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (814)
T ss_dssp CCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred CcEEEEEecCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence 999999999999999999999 8999999999999999999987 77778889999999999999667899999999999
Q ss_pred EEEEcccCCceeEEEecCCCcEEEEEEec--CCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCC
Q 038802 204 KLWDVRVENSKSVMEVNHGKPIEDVMFLP--SGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESG 280 (532)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 280 (532)
++||++++.........+...+.+++|+| ++.++++++ ||.|++||+.++ ..+..+.+|...|.+++|+|+
T Consensus 166 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~----- 239 (814)
T 3mkq_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK-SCVATLEGHMSNVSFAVFHPT----- 239 (814)
T ss_dssp EEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT-EEEEEEECCSSCEEEEEECSS-----
T ss_pred EEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC-cEEEEEcCCCCCEEEEEEcCC-----
Confidence 99999887777776666668999999999 999999998 899999999887 788889999999999999999
Q ss_pred ccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCE-EEEEecCCcEEEEeecCc
Q 038802 281 EEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMT-RVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 281 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~-l~~g~~dg~i~iw~~~~~ 346 (532)
+.++++++.||.|++||+.+++....+. +...+.+++|+|+|.. +++++.++.+.+|++...
T Consensus 240 ----~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 240 ----LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp ----SSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred ----CCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence 6799999999999999999999988887 6689999999999873 244455677888887653
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.2e-39 Score=319.54 Aligned_cols=285 Identities=16% Similarity=0.179 Sum_probs=243.7
Q ss_pred ccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEE
Q 038802 51 VSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRR 130 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~ 130 (532)
...+++++|+|+++++++++.|+.|++||..+++....+..| ..+....|+|++++|++|+.||.|++||+.+++....
T Consensus 56 ~~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 134 (420)
T 3vl1_A 56 VDAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREI 134 (420)
T ss_dssp CBCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEE
T ss_pred cccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeee
Confidence 345668999999999999999999999999987776666665 5566668899999999999999999999999999888
Q ss_pred ecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEccc
Q 038802 131 LKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRV 210 (532)
Q Consensus 131 ~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~ 210 (532)
+.+|.+.|.+++|+| ++.+|++|+.|+.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.||+|++||+++
T Consensus 135 ~~~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 135 DQAHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRLWECGT 212 (420)
T ss_dssp TTSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTT
T ss_pred cccccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCC
Confidence 899999999999999 899999999999999999999999999999999999999999 999999999999999999998
Q ss_pred CCceeEEEe--cCCCcEEE---------------------EEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcc
Q 038802 211 ENSKSVMEV--NHGKPIED---------------------VMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKT 266 (532)
Q Consensus 211 ~~~~~~~~~--~~~~~v~~---------------------i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~ 266 (532)
++....+.. .+...+.+ ++|+|+++++++++ ||.|++||++++.........|...
T Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 213 GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSC
T ss_pred CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCC
Confidence 655554432 23444444 45578899999998 8999999999885555555678999
Q ss_pred eEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceE-EEeee--cCCCeeEEEEecCCCEEEEEecCCcEEEEee
Q 038802 267 VTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKV-THSMR--FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRR 343 (532)
Q Consensus 267 i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~--~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~ 343 (532)
|.+++|+|++ ..++++++.||.|++||+.+++. +..+. +..+|.++.+ +++++|++|+.||.|++|++
T Consensus 293 v~~~~~~~~~--------~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 293 CNSLTVDGNN--------ANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp EEEEEECSSC--------TTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEE
T ss_pred ceeEEEeCCC--------CCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEec
Confidence 9999999994 33999999999999999998643 44444 5667888855 57889999999999999999
Q ss_pred cCcc
Q 038802 344 KKKE 347 (532)
Q Consensus 344 ~~~~ 347 (532)
...+
T Consensus 364 ~~~~ 367 (420)
T 3vl1_A 364 SDPE 367 (420)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 8753
No 46
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=320.58 Aligned_cols=282 Identities=18% Similarity=0.288 Sum_probs=235.8
Q ss_pred CccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCce-----------EEEEeeccC------------ceeEEEEEccC
Q 038802 48 PGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLE-----------KHSAISSFK------------DVVTCSSFRPD 104 (532)
Q Consensus 48 ~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~ 104 (532)
..|.+.|++++|+|+|++|++|+.||.|+|||+.++. ....+.+|. +.|++++|+|+
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 4578999999999999999999999999999998776 577888998 88999999999
Q ss_pred C--CEEEEEcCCCCEEEEECCCCceE---------------------------------------EE-ecCCCCCEEEEE
Q 038802 105 G--SLLAASDLSGLIQVFDVKSRTPL---------------------------------------RR-LKSHTRPVRFVK 142 (532)
Q Consensus 105 ~--~~l~~g~~dg~i~iwd~~~~~~~---------------------------------------~~-~~~h~~~i~~~~ 142 (532)
+ .+|++|+.||+|++||+.++... .. ..+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 79999999999999998764331 12 367999999999
Q ss_pred eecCCCcEEEEEeCCCeEEEEECCC-CeEEE-------eccCCCCceEEEEEeCCCC-CEEEEEeCCCeEEEEEcccCCc
Q 038802 143 YPFLDKLHLVSGGDDGIVKFWDVAG-ESVVL-------DLFGHKDYVRCGDCSPVNG-DMFVTGSYDHTVKLWDVRVENS 213 (532)
Q Consensus 143 ~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~~-------~~~~~~~~v~~i~~~~~~~-~~l~s~s~dg~i~iwd~~~~~~ 213 (532)
|+| ++.+|++| .|+.|++||+++ ++... .+.+|...|.+++|+| ++ .+|++|+.||+|++||++++..
T Consensus 185 ~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 185 INS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp ECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeCCCeEEEEECcCCcc
Confidence 999 89999998 799999999984 44444 3668999999999999 76 9999999999999999998664
Q ss_pred ----eeEEEecCCC------------cEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEccCCCcc-----------
Q 038802 214 ----KSVMEVNHGK------------PIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKT----------- 266 (532)
Q Consensus 214 ----~~~~~~~~~~------------~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~----------- 266 (532)
...+. .|.. .|.+++|+|++.+|++++++.|++||++....++..+..|...
T Consensus 262 ~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 340 (447)
T 3dw8_B 262 CDRHSKLFE-EPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEND 340 (447)
T ss_dssp SCTTCEEEC-CC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTS
T ss_pred ccceeeEec-cCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecccccccccccccccc
Confidence 33333 4443 8999999999999999989999999998744777778777642
Q ss_pred ----eEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEee-------------------------------
Q 038802 267 ----VTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSM------------------------------- 311 (532)
Q Consensus 267 ----i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------------------------------- 311 (532)
+..++|+|+ +.+|++|+.||.|++||+.+++.+...
T Consensus 341 ~i~~~~~~~~s~~---------~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (447)
T 3dw8_B 341 CIFDKFECCWNGS---------DSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVD 411 (447)
T ss_dssp GGGCCCCEEECTT---------SSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGG
T ss_pred ccccceEEEECCC---------CCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCccccccccc
Confidence 334999999 678999999999999999998876522
Q ss_pred --ecCCCeeEEEEecCCCEEEEEecCCcEEEEee
Q 038802 312 --RFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRR 343 (532)
Q Consensus 312 --~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~ 343 (532)
.+...|.+++|+|++.+|++++.++ +++|..
T Consensus 412 ~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 412 SLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp GCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred ccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 2345789999999999999998876 777764
No 47
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=305.86 Aligned_cols=273 Identities=19% Similarity=0.294 Sum_probs=228.0
Q ss_pred CCCCCCCCcccccccCCC------ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCc--eEEEEeeccCceeEEE
Q 038802 28 RNLSQTPESKYWSSFKPH------QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTL--EKHSAISSFKDVVTCS 99 (532)
Q Consensus 28 ~~~~~~~~~~~w~~~~~~------~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~--~~~~~~~~~~~~v~~~ 99 (532)
...+.++.+++|+.-... ...+|.+.|++++|+|++++|++|+.|+.+++|+..++ +....+.+|.+.|.++
T Consensus 32 as~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v 111 (345)
T 3fm0_A 32 ASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSV 111 (345)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEE
T ss_pred EEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEE
Confidence 344678999999865432 23689999999999999999999999999999998765 4577889999999999
Q ss_pred EEccCCCEEEEEcCCCCEEEEECCCC---ceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCe--EEEec
Q 038802 100 SFRPDGSLLAASDLSGLIQVFDVKSR---TPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGES--VVLDL 174 (532)
Q Consensus 100 ~~~~~~~~l~~g~~dg~i~iwd~~~~---~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~--~~~~~ 174 (532)
+|+|++++|++|+.||+|++||+.++ .++..+.+|...|.+++|+| ++.+|++|+.|++|++||.+++. +...+
T Consensus 112 ~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~ 190 (345)
T 3fm0_A 112 AWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDDWVCCATL 190 (345)
T ss_dssp EECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS-SSSCEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred EEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC-CCCEEEEEeCCCcEEEEEecCCCEEEEEEe
Confidence 99999999999999999999999775 34667889999999999999 89999999999999999998875 45678
Q ss_pred cCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCc---------------eeEEEecCCCcEEEEEEecCCCEEEE
Q 038802 175 FGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENS---------------KSVMEVNHGKPIEDVMFLPSGGLIAT 239 (532)
Q Consensus 175 ~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~---------------~~~~~~~~~~~v~~i~~~~~~~~l~~ 239 (532)
.+|...|.+++|+| ++++|++|+.|++|++||...... .......|...|.+++|+|++..+++
T Consensus 191 ~~h~~~v~~l~~sp-~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s 269 (345)
T 3fm0_A 191 EGHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALAT 269 (345)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEE
T ss_pred cCCCCceEEEEECC-CCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEE
Confidence 89999999999999 999999999999999999753221 11122237889999999999999999
Q ss_pred Ec-CCeEEEEEccCCCe--------eeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEe
Q 038802 240 AG-GNSVKIWDLIGGGK--------MVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHS 310 (532)
Q Consensus 240 ~~-d~~i~iwd~~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 310 (532)
++ |+.|++|+...... ......+|...|++++|+|++ ..+|++|+.||.|++|++.+.+....
T Consensus 270 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~--------~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 270 ACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKE--------PGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp EETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSS--------TTEEEEEETTSCEEEEEECC------
T ss_pred EeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCC--------ceEEEEcCCCCcEEEEEecCCCCccc
Confidence 88 99999999865421 123456899999999999984 46899999999999999988775543
No 48
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.2e-37 Score=307.09 Aligned_cols=278 Identities=21% Similarity=0.320 Sum_probs=238.5
Q ss_pred CeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEee--ccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEE
Q 038802 53 SINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAIS--SFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRR 130 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~ 130 (532)
.++.|+||+++ .|++| .|++|+|||..+++....+. +|.+.|++++|+|+|++||+|+.||+|++||+.+++.+..
T Consensus 107 y~~~l~wS~~n-~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 46789999864 66655 59999999999998877664 5778899999999999999999999999999999999999
Q ss_pred ecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC-eEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcc
Q 038802 131 LKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE-SVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVR 209 (532)
Q Consensus 131 ~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~ 209 (532)
+.+|...+.++.+ ++..+++|+.|+.+++||.... ..+..+.+|...+.++.++| ++.++++++.|+.+++||..
T Consensus 185 ~~~h~~~v~~~s~---~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~-~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 185 MTSHSARVGSLSW---NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp ECCCSSCEEEEEE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESS
T ss_pred EeCCCCceEEEee---CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC-CCCeeeeeeccccceEEeec
Confidence 9999999999888 4578999999999999998864 45677889999999999999 99999999999999999998
Q ss_pred cCCce---eEEEecCCCcEEEEEEecCCC-EEEEE--c-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCcc
Q 038802 210 VENSK---SVMEVNHGKPIEDVMFLPSGG-LIATA--G-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEE 282 (532)
Q Consensus 210 ~~~~~---~~~~~~~~~~v~~i~~~~~~~-~l~~~--~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 282 (532)
+++.. ......|...|.+++|+|.+. +++++ + |+.|++||+.++ .+...+..| ..+.++.|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~-~~~~~~~~~-~~v~~~~~~~~~------ 332 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG-ACLSAVDAH-SQVCSILWSPHY------ 332 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT-EEEEEEECS-SCEEEEEEETTT------
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc-ccceeeccc-cceeeeeecCCC------
Confidence 75432 233447889999999999654 55543 3 799999999987 777777654 568899999984
Q ss_pred ccccEEEEEe--cCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcc
Q 038802 283 AMQYRILSVA--LDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKE 347 (532)
Q Consensus 283 ~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~ 347 (532)
..+++++ .||.|+|||+.+++++..+. |.+.|++++|+|||++|++|+.||.|++|++....
T Consensus 333 ---~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 333 ---KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp ---TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred ---CeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 4555543 79999999999999999987 88999999999999999999999999999987543
No 49
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3e-38 Score=306.71 Aligned_cols=262 Identities=20% Similarity=0.307 Sum_probs=232.9
Q ss_pred CCCCCCCcccccccCC---CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCc------eEEEEeeccCceeEEE
Q 038802 29 NLSQTPESKYWSSFKP---HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTL------EKHSAISSFKDVVTCS 99 (532)
Q Consensus 29 ~~~~~~~~~~w~~~~~---~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~------~~~~~~~~~~~~v~~~ 99 (532)
+.+.++.+++|+.... ..+..|...|.+++|+|++.++++|+.|+.+++|++... .....+..|.+.|.++
T Consensus 81 s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 160 (354)
T 2pbi_B 81 SSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSAC 160 (354)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEE
T ss_pred EEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEE
Confidence 3467889999996544 345678899999999999999999999999999998542 3456677899999999
Q ss_pred EEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecC-CCcEEEEEeCCCeEEEEECCCCeEEEeccCCC
Q 038802 100 SFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFL-DKLHLVSGGDDGIVKFWDVAGESVVLDLFGHK 178 (532)
Q Consensus 100 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 178 (532)
+|+|++..|++|+.||+|++||+.+++.+..+.+|...|.+++|+|. ++.+|++|+.||.|++||+++++++..+.+|.
T Consensus 161 ~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~ 240 (354)
T 2pbi_B 161 SFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHE 240 (354)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCS
T ss_pred EEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC
Confidence 99999999999999999999999999999999999999999999873 35799999999999999999999999999999
Q ss_pred CceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEe-cCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCee
Q 038802 179 DYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEV-NHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKM 256 (532)
Q Consensus 179 ~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~ 256 (532)
..|++++|+| ++.+|++|+.|++|++||++.......+.. .+...+.+++|+|++.++++++ |+.|++||+.++ ..
T Consensus 241 ~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~-~~ 318 (354)
T 2pbi_B 241 SDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKG-SR 318 (354)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-SE
T ss_pred CCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCC-ce
Confidence 9999999999 999999999999999999987544443332 2345789999999999999998 899999999887 67
Q ss_pred eEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEE
Q 038802 257 VYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFD 301 (532)
Q Consensus 257 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd 301 (532)
+..+.+|...|++++|+|+ +.+|++|+.||.|++|+
T Consensus 319 ~~~l~~h~~~v~~l~~spd---------g~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 319 VSILFGHENRVSTLRVSPD---------GTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEECCCSSCEEEEEECTT---------SSCEEEEETTSEEEEEC
T ss_pred EEEEECCCCcEEEEEECCC---------CCEEEEEcCCCCEEecC
Confidence 7888999999999999999 67899999999999996
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.3e-38 Score=305.31 Aligned_cols=285 Identities=14% Similarity=0.161 Sum_probs=249.1
Q ss_pred cccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCce--
Q 038802 50 LVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTP-- 127 (532)
Q Consensus 50 h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~-- 127 (532)
|.++|.+++|+|+|++++++..++.+..|+...........+|.+.|++++|+|++++|++++ ||.|++||+.++..
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 567899999999999999888888777777666555555568999999999999999999999 99999999987643
Q ss_pred -EEEec--CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCe--EEEeccCCCCceEEEEEeCCCCCEEEEEeCCCe
Q 038802 128 -LRRLK--SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGES--VVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHT 202 (532)
Q Consensus 128 -~~~~~--~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~ 202 (532)
+..+. +|...|.+++|+| ++.++++++.||.|++||+.+++ ....+..|...|.+++|+| +++++++++.||.
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~ 164 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGN 164 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSC
T ss_pred eeecccccCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECC-CCCEEEEEeCCCc
Confidence 33333 7999999999999 89999999999999999999887 5667788999999999999 9999999999999
Q ss_pred EEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCc
Q 038802 203 VKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGE 281 (532)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 281 (532)
|++||+++++....+. .|...|.+++|+|++.++++++ |+.|++||++++ +.+..+ .+...+.+++|+|+
T Consensus 165 v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~-~~~~~~-~~~~~v~~~~~s~~------ 235 (337)
T 1gxr_A 165 IAVWDLHNQTLVRQFQ-GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG-RQLQQH-DFTSQIFSLGYCPT------ 235 (337)
T ss_dssp EEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-EEEEEE-ECSSCEEEEEECTT------
T ss_pred EEEEeCCCCceeeeee-cccCceEEEEECCCCCEEEEEecCCcEEEEECCCC-ceEeee-cCCCceEEEEECCC------
Confidence 9999998865444443 6889999999999999999998 899999999887 665555 47788999999999
Q ss_pred cccccEEEEEecCCeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 282 EAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 282 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+.++++++.||.|++||+.+++......|..+|.+++|+|+++++++++.||.|++|++.+++..
T Consensus 236 ---~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 236 ---GEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp ---SSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ---CCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 67899999999999999999988776678899999999999999999999999999999887654
No 51
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.9e-38 Score=303.08 Aligned_cols=265 Identities=20% Similarity=0.313 Sum_probs=225.5
Q ss_pred CCCCCCCCcccccccCC----------CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeE
Q 038802 28 RNLSQTPESKYWSSFKP----------HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVT 97 (532)
Q Consensus 28 ~~~~~~~~~~~w~~~~~----------~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~ 97 (532)
...+.++.+++|+.... ..+.+|...|++++|+|++.++++|+.|+.|++||+.+++....+.+|...|.
T Consensus 43 ~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~ 122 (343)
T 2xzm_R 43 ISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVY 122 (343)
T ss_dssp EEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEE
T ss_pred EEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEE
Confidence 34567899999996532 24689999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCEEEEEcCCCCEEEEECCCCceEEEec---CCCCCEEEEEeecCCC----------cEEEEEeCCCeEEEEE
Q 038802 98 CSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLK---SHTRPVRFVKYPFLDK----------LHLVSGGDDGIVKFWD 164 (532)
Q Consensus 98 ~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~---~h~~~i~~~~~~~~~~----------~~l~s~s~dg~i~iwd 164 (532)
+++|+|++++|++|+.||+|++||+... ...... +|...|.+++|+| ++ .++++++.||.|++||
T Consensus 123 ~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd 200 (343)
T 2xzm_R 123 SVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWN 200 (343)
T ss_dssp EEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEE
T ss_pred EEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEc
Confidence 9999999999999999999999999743 333333 7899999999998 54 6899999999999999
Q ss_pred CCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEcCCe
Q 038802 165 VAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNS 244 (532)
Q Consensus 165 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~ 244 (532)
.+.+....+.+|...|.+++|+| ++++|++|+.||+|++||++...... ....+...|.+++|+|++.+++++.|+.
T Consensus 201 -~~~~~~~~~~~h~~~v~~~~~s~-~g~~l~sgs~dg~v~iwd~~~~~~~~-~~~~~~~~v~~v~~sp~~~~la~~~d~~ 277 (343)
T 2xzm_R 201 -TNFQIRYTFKAHESNVNHLSISP-NGKYIATGGKDKKLLIWDILNLTYPQ-REFDAGSTINQIAFNPKLQWVAVGTDQG 277 (343)
T ss_dssp -TTTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTCEEEEEESSCCSSCS-EEEECSSCEEEEEECSSSCEEEEEESSC
T ss_pred -CCCceeEEEcCccccceEEEECC-CCCEEEEEcCCCeEEEEECCCCcccc-eeecCCCcEEEEEECCCCCEEEEECCCC
Confidence 45677778889999999999999 99999999999999999995433222 2234567899999999999998888999
Q ss_pred EEEEEccCCCe-eeEEcc-----------CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCce
Q 038802 245 VKIWDLIGGGK-MVYSME-----------SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMK 306 (532)
Q Consensus 245 i~iwd~~~~~~-~~~~~~-----------~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 306 (532)
|++||+.+... .+..+. +|...|.+++|+|+ +.+|++|+.||.|++|++.++.
T Consensus 278 v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---------g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 278 VKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNAL---------GKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp EEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSS---------SCCEEEEETTSEEEEEEEEEEE
T ss_pred EEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCC---------CCeEEEecCCceEEEEEEEccC
Confidence 99999976522 122333 68888999999999 6789999999999999987643
No 52
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.5e-38 Score=295.65 Aligned_cols=252 Identities=17% Similarity=0.244 Sum_probs=214.7
Q ss_pred EEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC--CceEEEecCCCCCEEEEEeecC-CCcEEEEEeCCCeEEEE
Q 038802 87 SAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS--RTPLRRLKSHTRPVRFVKYPFL-DKLHLVSGGDDGIVKFW 163 (532)
Q Consensus 87 ~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~~~h~~~i~~~~~~~~-~~~~l~s~s~dg~i~iw 163 (532)
..+.+|.+.|++++|+|+|++||+|+.||+|++||+.. .+.+..+.+|.++|.+++|++. ++.+|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 35678999999999999999999999999999999974 3678889999999999999862 37899999999999999
Q ss_pred ECCCCe--EEEeccCCCCceEEEEEeCCC--CCEEEEEeCCCeEEEEEcccCCce-eEEEecCCCcEEEEEEecC-----
Q 038802 164 DVAGES--VVLDLFGHKDYVRCGDCSPVN--GDMFVTGSYDHTVKLWDVRVENSK-SVMEVNHGKPIEDVMFLPS----- 233 (532)
Q Consensus 164 d~~~~~--~~~~~~~~~~~v~~i~~~~~~--~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~~~v~~i~~~~~----- 233 (532)
|+++++ .+..+.+|...|.+++|+| + +.+|++|+.|++|++||+++.... ......|...|.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCc-CCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 998774 5566788999999999999 5 789999999999999999875322 3334478999999999997
Q ss_pred --------CCEEEEEc-CCeEEEEEccCCC---eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEE
Q 038802 234 --------GGLIATAG-GNSVKIWDLIGGG---KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFD 301 (532)
Q Consensus 234 --------~~~l~~~~-d~~i~iwd~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd 301 (532)
+++|++++ |+.|++||++++. .....+.+|...|.+++|+|++.. +.+|++++.|++|++||
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~------~~~las~s~D~~v~iWd 235 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL------RSYMASVSQDRTCIIWT 235 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS------SEEEEEEETTSCEEEEE
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCC------ceEEEEEECCCcEEEEE
Confidence 46899988 9999999998753 256678899999999999998411 37899999999999999
Q ss_pred CCCce---EEEee---ecCCCeeEEEEecCCCEEEEEecCCcEEEEeecC
Q 038802 302 YGKMK---VTHSM---RFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKK 345 (532)
Q Consensus 302 ~~~~~---~~~~~---~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~ 345 (532)
+.+.. ....+ .+...|.+++|+|+|++|++|+.||.|++|+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred eCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 87642 12222 3678899999999999999999999999999864
No 53
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.1e-39 Score=314.46 Aligned_cols=266 Identities=20% Similarity=0.271 Sum_probs=235.9
Q ss_pred eEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEE
Q 038802 74 SLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVS 153 (532)
Q Consensus 74 ~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s 153 (532)
.+..|+..+.....++.+|.+.|++++|+|++++|++|+.||+|++||+.+++....+..|...|.+++|+| ++.++++
T Consensus 47 ~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~-~g~~las 125 (380)
T 3iz6_a 47 TAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAP-NGQSVAC 125 (380)
T ss_dssp GCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECT-TSSEEEE
T ss_pred cccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECC-CCCEEEE
Confidence 445677777888899999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred EeCCCeEEEEECCCCe-------EEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEE----ecCC
Q 038802 154 GGDDGIVKFWDVAGES-------VVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVME----VNHG 222 (532)
Q Consensus 154 ~s~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~----~~~~ 222 (532)
|+.|+.|++||+.+.. ....+.+|.+.|.++.|+|.++..|++|+.|++|++||++++.....+. .+|.
T Consensus 126 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~ 205 (380)
T 3iz6_a 126 GGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHT 205 (380)
T ss_dssp CCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCC
T ss_pred eeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCc
Confidence 9999999999987532 3445778999999999999556789999999999999999876665542 3688
Q ss_pred CcEEEEEEec-CCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEE
Q 038802 223 KPIEDVMFLP-SGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVF 300 (532)
Q Consensus 223 ~~v~~i~~~~-~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iw 300 (532)
..|.+++|++ ++.++++++ |+.|++||++.....+..+.+|...|.+++|+|+ +.+|++|+.||+|++|
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~---------~~~l~s~s~D~~i~lw 276 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPD---------GQRFGTGSDDGTCRLF 276 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTT---------SSEEEEECSSSCEEEE
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecC---------CCeEEEEcCCCeEEEE
Confidence 8999999987 788999998 9999999998665788889999999999999999 6799999999999999
Q ss_pred ECCCceEEEeeecC--------CCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 301 DYGKMKVTHSMRFP--------APLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 301 d~~~~~~~~~~~~~--------~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
|+.+++.+..+... ..|++++|+|+|+++++|+.||.|++||..+.+..
T Consensus 277 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 277 DMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMV 333 (380)
T ss_dssp ETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEE
T ss_pred ECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceE
Confidence 99999988877522 24899999999999999999999999998776543
No 54
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=307.83 Aligned_cols=305 Identities=16% Similarity=0.201 Sum_probs=248.8
Q ss_pred CCcccccccCC---CccCccccCeeEEEEcC-CCCeEEEEEeCCeEEEEeCCCceEEEEee-------------ccCcee
Q 038802 34 PESKYWSSFKP---HQIPGLVSSINSIVFSP-TTSHLFAATHSASLTLFSSQTLEKHSAIS-------------SFKDVV 96 (532)
Q Consensus 34 ~~~~~w~~~~~---~~~~~h~~~V~~i~~sp-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~-------------~~~~~v 96 (532)
...++|+.-.. ..+.+|.++|++++|+| +++++++|+.||.|++||+.++.....+. +|...|
T Consensus 23 ~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 102 (408)
T 4a11_B 23 STRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSV 102 (408)
T ss_dssp HHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCE
T ss_pred CcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcE
Confidence 34566664322 33578999999999999 99999999999999999998876554443 589999
Q ss_pred EEEEEcc-CCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecC--CCcEEEEEeCCCeEEEEECCCCeEEEe
Q 038802 97 TCSSFRP-DGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFL--DKLHLVSGGDDGIVKFWDVAGESVVLD 173 (532)
Q Consensus 97 ~~~~~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~ 173 (532)
.+++|+| ++.+|++|+.||.|++||+.+++....+. +...+.++.|++. ++.++++++.||.|++||+++++.+..
T Consensus 103 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 181 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHI 181 (408)
T ss_dssp EEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEE
T ss_pred EEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeee
Confidence 9999999 78899999999999999999998888876 7888999999883 233899999999999999999999999
Q ss_pred ccCCCCceEEEEEeCCCCC-EEEEEeCCCeEEEEEcccCCceeEEE---------------ecCCCcEEEEEEecCCCEE
Q 038802 174 LFGHKDYVRCGDCSPVNGD-MFVTGSYDHTVKLWDVRVENSKSVME---------------VNHGKPIEDVMFLPSGGLI 237 (532)
Q Consensus 174 ~~~~~~~v~~i~~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~---------------~~~~~~v~~i~~~~~~~~l 237 (532)
+.+|...|.+++|+| ++. ++++|+.||.|++||+++........ ..|...|.+++|+|++.++
T Consensus 182 ~~~~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 260 (408)
T 4a11_B 182 LQGHRQEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHL 260 (408)
T ss_dssp ECCCCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEE
T ss_pred ecCCCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEE
Confidence 999999999999999 666 69999999999999998765322221 3688899999999999999
Q ss_pred EEEc-CCeEEEEEccCCCeeeEEccCCC----cceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee
Q 038802 238 ATAG-GNSVKIWDLIGGGKMVYSMESHN----KTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR 312 (532)
Q Consensus 238 ~~~~-d~~i~iwd~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 312 (532)
++++ |+.|++||+.++ ........+. .......+.... ...+++++.|+.|++||+.+++.+..+.
T Consensus 261 ~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 261 LTVGTDNRMRLWNSSNG-ENTLVNYGKVCNNSKKGLKFTVSCGC--------SSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp EEEETTSCEEEEETTTC-CBCCCCCCCCCCCCSSCCCCEECCSS--------SSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred EEecCCCeEEEEECCCC-ccceeccccccccccccceeEEecCC--------CceEEEEecCCEEEEEECcCCcceeeec
Confidence 9998 899999999877 3332222211 111122222222 4568888899999999999999999887
Q ss_pred -cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 313 -FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 313 -~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
|...|++++|+|++++|++|+.||.|++|++.+.+..
T Consensus 332 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 332 GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 8889999999999999999999999999999988655
No 55
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.1e-37 Score=352.33 Aligned_cols=290 Identities=21% Similarity=0.327 Sum_probs=265.4
Q ss_pred ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCC
Q 038802 46 QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSR 125 (532)
Q Consensus 46 ~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 125 (532)
.+.+|.+.|++++|+|+++++++|+.||.|++||..+++....+.+|.+.|.+++|+|++++|++|+.||.|++||+.++
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~ 689 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG 689 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCCCCEEEEEeecC-CCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEE
Q 038802 126 TPLRRLKSHTRPVRFVKYPFL-DKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVK 204 (532)
Q Consensus 126 ~~~~~~~~h~~~i~~~~~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~ 204 (532)
+.+..+.+|...|.+++|+|. +...+++|+.||.|++||+.+++++..+.+|.+.|++++|+| +++++++|+.||+|+
T Consensus 690 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~dg~v~ 768 (1249)
T 3sfz_A 690 KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP-DDELLASCSADGTLR 768 (1249)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS-STTEEEEEESSSEEE
T ss_pred ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEec-CCCEEEEEECCCeEE
Confidence 999999999999999999984 345889999999999999999999999999999999999999 999999999999999
Q ss_pred EEEcccCCceeEEEe------------cCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEccCCCcceEEEEE
Q 038802 205 LWDVRVENSKSVMEV------------NHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTSVCV 272 (532)
Q Consensus 205 iwd~~~~~~~~~~~~------------~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~ 272 (532)
+||++++........ .....+.+++|+|+|..+++++++.+.+||+.++........+|...+.+++|
T Consensus 769 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~ 848 (1249)
T 3sfz_A 769 LWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDF 848 (1249)
T ss_dssp EEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEE
T ss_pred EEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEE
Confidence 999988654444322 12347889999999999999999999999999885555555589999999999
Q ss_pred eccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEeecC
Q 038802 273 GRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKK 345 (532)
Q Consensus 273 ~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~ 345 (532)
+|+ +.++++++.||.|++||+.++..+..+. |...|.+++|+|+|+++++++.||.|++|+..+
T Consensus 849 sp~---------~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 849 SPY---------DHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp CSS---------TTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHH
T ss_pred cCC---------CCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccc
Confidence 998 6799999999999999999999888876 788999999999999999999999999999865
No 56
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-37 Score=298.79 Aligned_cols=266 Identities=19% Similarity=0.277 Sum_probs=213.0
Q ss_pred CCCCCCCcccccccCC-----Ccc-Cc-cccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCC-------ceEEEEeeccCc
Q 038802 29 NLSQTPESKYWSSFKP-----HQI-PG-LVSSINSIVFSPTTSHLFAATHSASLTLFSSQT-------LEKHSAISSFKD 94 (532)
Q Consensus 29 ~~~~~~~~~~w~~~~~-----~~~-~~-h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~-------~~~~~~~~~~~~ 94 (532)
..+.++.+++|+.... ..+ .+ |.++|++++|+|++++|++|+.|+.|++||... .+....+.+|.+
T Consensus 29 s~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~ 108 (330)
T 2hes_X 29 TGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHEN 108 (330)
T ss_dssp EEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----
T ss_pred EEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCC
Confidence 4467889999986432 122 34 999999999999999999999999999999843 456777889999
Q ss_pred eeEEEEEccCCCEEEEEcCCCCEEEEECCC----CceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC--
Q 038802 95 VVTCSSFRPDGSLLAASDLSGLIQVFDVKS----RTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE-- 168 (532)
Q Consensus 95 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~----~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~-- 168 (532)
.|.+++|+|++++|++|+.|++|++||+.. .+++..+.+|...|.+++|+| ++.+|++|+.|++|++||..++
T Consensus 109 ~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~~~~~ 187 (330)
T 2hes_X 109 EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP-SEALLASSSYDDTVRIWKDYDDDW 187 (330)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEE
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCe
Confidence 999999999999999999999999999943 256778899999999999999 8999999999999999998776
Q ss_pred eEEEeccCCCCceEEEEEeCCC--CCEEEEEeCCCeEEEEEcccCCc------eeEEEe--cCCCcEEEEEEecCCCEEE
Q 038802 169 SVVLDLFGHKDYVRCGDCSPVN--GDMFVTGSYDHTVKLWDVRVENS------KSVMEV--NHGKPIEDVMFLPSGGLIA 238 (532)
Q Consensus 169 ~~~~~~~~~~~~v~~i~~~~~~--~~~l~s~s~dg~i~iwd~~~~~~------~~~~~~--~~~~~v~~i~~~~~~~~l~ 238 (532)
+++..+.+|...|.+++|+| + +..|++|+.|++|++||++.... ...... .|...|.+++|++++ +++
T Consensus 188 ~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~ 265 (330)
T 2hes_X 188 ECVAVLNGHEGTVWSSDFDK-TEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIA 265 (330)
T ss_dssp EEEEEECCCSSCEEEEEECC-SSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEE
T ss_pred eEEEEccCCCCcEEEEEecC-CCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEE
Confidence 67888899999999999999 6 67899999999999999976421 111121 388999999999776 566
Q ss_pred EEc-CCeEEEEEccCCC-eee-EEccCCCc-ceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 239 TAG-GNSVKIWDLIGGG-KMV-YSMESHNK-TVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 239 ~~~-d~~i~iwd~~~~~-~~~-~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
+++ ||.|++||..++. ... ....+|.. .|.+++|+|... +.+|++|+.||.|++||+.+
T Consensus 266 s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~-------~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 266 SVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNG-------KTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC------------CCEEEEETTSEEEEEEC--
T ss_pred EEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCC-------ceEEEEecCCCcEEEEEecc
Confidence 666 9999999987652 222 33467887 899999999310 57899999999999999864
No 57
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-39 Score=324.59 Aligned_cols=283 Identities=14% Similarity=0.116 Sum_probs=227.7
Q ss_pred cccCeeEEEEcCCC---------CeEEEEE-------------------eCCeEEEEeCCCceEE----EEeeccCceeE
Q 038802 50 LVSSINSIVFSPTT---------SHLFAAT-------------------HSASLTLFSSQTLEKH----SAISSFKDVVT 97 (532)
Q Consensus 50 h~~~V~~i~~sp~~---------~~l~~~~-------------------~d~~v~i~~~~~~~~~----~~~~~~~~~v~ 97 (532)
+.+.|.+|+|+|++ ++||+|+ .|+.|+|||+.+++.. ..+..|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 56789999999986 5777644 6789999998776542 34667788999
Q ss_pred EEEEccC------CCEEEEEcCCCCEEEEECCCCce-----------EEEecCCCCCEEEEEeecCCCcEEEEEeCCCeE
Q 038802 98 CSSFRPD------GSLLAASDLSGLIQVFDVKSRTP-----------LRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIV 160 (532)
Q Consensus 98 ~~~~~~~------~~~l~~g~~dg~i~iwd~~~~~~-----------~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i 160 (532)
+++|+|+ +.+||+|+.||+|++||+.++.. ...+.+|...|++++|++ + ..|++|+.||+|
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~-~~lasgs~DgtV 289 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-P-TTVVCGFKNGFV 289 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-S-SEEEEEETTSEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-C-CeEEEEeCCCEE
Confidence 9999996 57999999999999999976532 246788999999999997 4 479999999999
Q ss_pred EEEECCCC-eEEEeccCCCCceEEE--EEeCCCC-CEEEEEeCCCeEEEEEcccCCceeEEEecCC--CcEEEEEEecCC
Q 038802 161 KFWDVAGE-SVVLDLFGHKDYVRCG--DCSPVNG-DMFVTGSYDHTVKLWDVRVENSKSVMEVNHG--KPIEDVMFLPSG 234 (532)
Q Consensus 161 ~iwd~~~~-~~~~~~~~~~~~v~~i--~~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~--~~v~~i~~~~~~ 234 (532)
++||++++ .+...+.+|...|+++ +|+| ++ .+|++|+.|++|++||+++++....+. +|. ..|.+++|+|++
T Consensus 290 ~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~~~~~~-~~~~~~~v~~v~fsp~~ 367 (524)
T 2j04_B 290 AEFDLTDPEVPSFYDQVHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIATTKTTV-SRFRGSNLVPVVYCPQI 367 (524)
T ss_dssp EEEETTBCSSCSEEEECSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHHHCEEE-EECSCCSCCCEEEETTT
T ss_pred EEEECCCCCCceEEeecccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCcccccc-cccccCcccceEeCCCc
Confidence 99999876 3445678899999999 4566 76 899999999999999999865554443 333 358899999999
Q ss_pred CEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc-----e--
Q 038802 235 GLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM-----K-- 306 (532)
Q Consensus 235 ~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----~-- 306 (532)
..+++++ |++|++||++++ .++..+.+|...|++++|+|+ +.+|++|+.||+|++||+... +
T Consensus 368 ~~l~s~~~d~tv~lwd~~~~-~~~~~l~gH~~~V~sva~Sp~---------g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~ 437 (524)
T 2j04_B 368 YSYIYSDGASSLRAVPSRAA-FAVHPLVSRETTITAIGVSRL---------HPMVLAGSADGSLIITNAARRLLHGIKNS 437 (524)
T ss_dssp TEEEEECSSSEEEEEETTCT-TCCEEEEECSSCEEEEECCSS---------CCBCEEEETTTEEECCBSCSSTTTCC---
T ss_pred CeEEEeCCCCcEEEEECccc-ccceeeecCCCceEEEEeCCC---------CCeEEEEECCCEEEEEechHhhccccccC
Confidence 9998888 889999999887 666778889999999999999 578999999999999985320 0
Q ss_pred -------EE------------------------------Eee-ecCCCeeEEEEecCC---CEEEEEecCCcEEEEeecC
Q 038802 307 -------VT------------------------------HSM-RFPAPLMSVAFSPDC---MTRVIGTSNGTIFAGRRKK 345 (532)
Q Consensus 307 -------~~------------------------------~~~-~~~~~v~~~~~s~~~---~~l~~g~~dg~i~iw~~~~ 345 (532)
.+ ..+ .|..+|.+++|+|++ ..+++|+.||.|+||++..
T Consensus 438 ~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 438 SATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp ---CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred ccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 01 111 145679999999995 4999999999999999875
Q ss_pred c
Q 038802 346 K 346 (532)
Q Consensus 346 ~ 346 (532)
+
T Consensus 518 ~ 518 (524)
T 2j04_B 518 E 518 (524)
T ss_dssp C
T ss_pred c
Confidence 4
No 58
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.5e-37 Score=307.95 Aligned_cols=292 Identities=21% Similarity=0.371 Sum_probs=260.4
Q ss_pred CCCCCCcccccccCCC---ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCC
Q 038802 30 LSQTPESKYWSSFKPH---QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGS 106 (532)
Q Consensus 30 ~~~~~~~~~w~~~~~~---~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 106 (532)
.+.++.+++|+..... .+.+|.++|.+++|+ ++++++|+.||.|++||+.+++....+.+|...|.+++|+ ++
T Consensus 135 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~ 210 (445)
T 2ovr_B 135 GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EK 210 (445)
T ss_dssp EETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TT
T ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CC
Confidence 3567889999965543 468999999999998 4589999999999999999999999999999999999995 56
Q ss_pred EEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEE
Q 038802 107 LLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDC 186 (532)
Q Consensus 107 ~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~ 186 (532)
.+++|+.||.|++||+.+++.+..+.+|...|.++.| ++..+++|+.||.|++||+++++.+..+.+|...|.++.|
T Consensus 211 ~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 287 (445)
T 2ovr_B 211 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 287 (445)
T ss_dssp EEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE
Confidence 8999999999999999999999999999999999999 5678999999999999999999999999999999999998
Q ss_pred eCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccC---
Q 038802 187 SPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMES--- 262 (532)
Q Consensus 187 ~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~--- 262 (532)
++.++++|+.||.|++||+++++....+. .|...+.++.++ +.++++++ ||.|++||+.++ +.+..+..
T Consensus 288 ---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~ 360 (445)
T 2ovr_B 288 ---DGIHVVSGSLDTSIRVWDVETGNCIHTLT-GHQSLTSGMELK--DNILVSGNADSTVKIWDIKTG-QCLQTLQGPNK 360 (445)
T ss_dssp ---CSSEEEEEETTSCEEEEETTTCCEEEEEC-CCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTC-CEEEEECSTTS
T ss_pred ---CCCEEEEEeCCCeEEEEECCCCCEEEEEc-CCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCC-cEEEEEccCCC
Confidence 57899999999999999999876655544 688888888774 56888888 999999999887 67777765
Q ss_pred CCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEee------ecCCCeeEEEEecCCCEEEEEecCC
Q 038802 263 HNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSM------RFPAPLMSVAFSPDCMTRVIGTSNG 336 (532)
Q Consensus 263 ~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~g~~dg 336 (532)
|...|.+++|+ +.++++|+.||.|++||+.+++.+..+ .+.+.|++++|+|++.++++|+.||
T Consensus 361 ~~~~v~~~~~~-----------~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 361 HQSAVTCLQFN-----------KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp CSSCEEEEEEC-----------SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred CCCCEEEEEEC-----------CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 88899999996 358999999999999999999998887 3678899999999999999999999
Q ss_pred c----EEEEeecCc
Q 038802 337 T----IFAGRRKKK 346 (532)
Q Consensus 337 ~----i~iw~~~~~ 346 (532)
. |.+||+...
T Consensus 430 ~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 430 TEETKLLVLDFDVD 443 (445)
T ss_dssp SSCCEEEEEECCCC
T ss_pred CCccEEEEEECCCC
Confidence 8 999999764
No 59
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.4e-38 Score=307.39 Aligned_cols=282 Identities=10% Similarity=0.087 Sum_probs=225.7
Q ss_pred ccCeeEEEEcCCCCeEEEEEeC-------CeEEEEeCCCceE----------EEEeeccCceeEEEEEccCCCEEEEE--
Q 038802 51 VSSINSIVFSPTTSHLFAATHS-------ASLTLFSSQTLEK----------HSAISSFKDVVTCSSFRPDGSLLAAS-- 111 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d-------~~v~i~~~~~~~~----------~~~~~~~~~~v~~~~~~~~~~~l~~g-- 111 (532)
.-||+|++|+||+++|++|+.+ +.|++|++..... ...+..|.+.|.+++++ ++.+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 3489999999999999998754 3699999865321 22456788888888764 5566665
Q ss_pred ---------cCCCCEEEEECCCCceE----EEe-----cCCCCCEEEEEeecCCCcEEEEEe--CCCeEEEEECCCCeEE
Q 038802 112 ---------DLSGLIQVFDVKSRTPL----RRL-----KSHTRPVRFVKYPFLDKLHLVSGG--DDGIVKFWDVAGESVV 171 (532)
Q Consensus 112 ---------~~dg~i~iwd~~~~~~~----~~~-----~~h~~~i~~~~~~~~~~~~l~s~s--~dg~i~iwd~~~~~~~ 171 (532)
+.|+.+++|++...... ... ..+...+.+++|+| +++++++++ .|++|++||+.+++++
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~ 170 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEK 170 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEE
Confidence 35778999998654321 111 13455689999999 888876544 7899999999999998
Q ss_pred EeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEE-EecCCCcEEEEEEecCCCEEEEEc-CC----eE
Q 038802 172 LDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVM-EVNHGKPIEDVMFLPSGGLIATAG-GN----SV 245 (532)
Q Consensus 172 ~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~~~~-d~----~i 245 (532)
..+. |...|.+++|+| ++.++++++.| .+.+|+..++...... ...|...|.+++|+|++.++++++ ++ .+
T Consensus 171 ~~~~-~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i 247 (365)
T 4h5i_A 171 FEIE-TRGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVL 247 (365)
T ss_dssp EEEE-CSSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEE
T ss_pred EEeC-CCCceEEEEEcc-CCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEE
Confidence 8876 778899999999 99999999865 5667776665544333 336888999999999999999987 55 68
Q ss_pred EEEEccCCCe---eeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEee-e-cCCCeeEE
Q 038802 246 KIWDLIGGGK---MVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSM-R-FPAPLMSV 320 (532)
Q Consensus 246 ~iwd~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~-~~~~v~~~ 320 (532)
++||+..... ....+.+|...|++++|+|+ +.+|++|+.|+.|+|||+.+++++..+ . |..+|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spd---------g~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v 318 (365)
T 4h5i_A 248 TKISIKSGNTSVLRSKQVTNRFKGITSMDVDMK---------GELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEV 318 (365)
T ss_dssp EEEEEETTEEEEEEEEEEESSCSCEEEEEECTT---------SCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEE
T ss_pred eecccccceecceeeeeecCCCCCeEeEEECCC---------CCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEE
Confidence 8899876532 23556789999999999999 689999999999999999999999886 3 88999999
Q ss_pred EEecCCCEEEEEecCCcEEEEeecCcc
Q 038802 321 AFSPDCMTRVIGTSNGTIFAGRRKKKE 347 (532)
Q Consensus 321 ~~s~~~~~l~~g~~dg~i~iw~~~~~~ 347 (532)
+|+|||++|++|+.|++|+||++...-
T Consensus 319 ~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 319 TISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp EECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred EECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 999999999999999999999997653
No 60
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.3e-37 Score=301.07 Aligned_cols=277 Identities=16% Similarity=0.182 Sum_probs=242.7
Q ss_pred CccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCce---EEEEeeccCceeEEEEEccCCC-EEEEEcCCCCEEEEEC-
Q 038802 48 PGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLE---KHSAISSFKDVVTCSSFRPDGS-LLAASDLSGLIQVFDV- 122 (532)
Q Consensus 48 ~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~- 122 (532)
.+|.+.|++++|+|+++++++++.|+.|++|++.++. ....+..|...|++++|+|+++ +|++|+.||.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 5899999999999999999999999999999998776 3455668999999999999999 9999999999999999
Q ss_pred CCCceEEEecC--CCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCC---------CeEEEeccCCCCceEEEEEeCCCC
Q 038802 123 KSRTPLRRLKS--HTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAG---------ESVVLDLFGHKDYVRCGDCSPVNG 191 (532)
Q Consensus 123 ~~~~~~~~~~~--h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~---------~~~~~~~~~~~~~v~~i~~~~~~~ 191 (532)
.+++. ..+.+ |...|.+++|+| +..+++++.|+.|++||+++ ++++..+. |...|.+++|+| ++
T Consensus 88 ~~~~~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~ 162 (342)
T 1yfq_A 88 GSPSF-QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNS-SR 162 (342)
T ss_dssp SSSSE-EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECS-SE
T ss_pred cCCce-EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecC-Cc
Confidence 77654 77888 999999999998 77899999999999999987 66666666 889999999998 54
Q ss_pred CEEEEEeCCCeEEEEEccc-CCc-eeEEEecCCCcEEEEEEec-CCCEEEEEc-CCeEEEEEccCC-----CeeeEEccC
Q 038802 192 DMFVTGSYDHTVKLWDVRV-ENS-KSVMEVNHGKPIEDVMFLP-SGGLIATAG-GNSVKIWDLIGG-----GKMVYSMES 262 (532)
Q Consensus 192 ~~l~s~s~dg~i~iwd~~~-~~~-~~~~~~~~~~~v~~i~~~~-~~~~l~~~~-d~~i~iwd~~~~-----~~~~~~~~~ 262 (532)
+++++.|+.|++||+++ ... .......+...+.+++|+| ++.++++++ ||.|++|++... ......+..
T Consensus 163 --l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 240 (342)
T 1yfq_A 163 --LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC 240 (342)
T ss_dssp --EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEEC
T ss_pred --EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeec
Confidence 99999999999999987 543 3334457888999999999 999999998 899999999876 366677777
Q ss_pred CCc---------ceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-c-CCCeeEEEEecCCCEEEE
Q 038802 263 HNK---------TVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-F-PAPLMSVAFSPDCMTRVI 331 (532)
Q Consensus 263 ~~~---------~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~-~~~v~~~~~s~~~~~l~~ 331 (532)
|.. .|.+++|+|+ +.+|++++.||.|++||+.+++.+..+. | ..+|.+++ |++++|++
T Consensus 241 ~~~~~~~~~~~~~i~~~~~s~~---------~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s 309 (342)
T 1yfq_A 241 HRLNLKDTNLAYPVNSIEFSPR---------HKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCL 309 (342)
T ss_dssp CCCCTTCCSSCCCEEEEEECTT---------TCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEE
T ss_pred ccccccccccceeEEEEEEcCC---------CCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEE
Confidence 755 9999999998 6789999999999999999999998887 5 78999999 99999999
Q ss_pred EecCCc-EEEEe
Q 038802 332 GTSNGT-IFAGR 342 (532)
Q Consensus 332 g~~dg~-i~iw~ 342 (532)
|+.||. ...|.
T Consensus 310 ~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 310 ATSDDTFKTNAA 321 (342)
T ss_dssp EEECTHHHHCSS
T ss_pred EecCCccccccc
Confidence 999997 44333
No 61
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.4e-38 Score=305.82 Aligned_cols=246 Identities=17% Similarity=0.225 Sum_probs=207.7
Q ss_pred CccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEE----EeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECC
Q 038802 48 PGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHS----AISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVK 123 (532)
Q Consensus 48 ~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 123 (532)
.+|.+.|++++|+|++. +++++.||.|+|||+.+++... ...+|.+.|++++|+|++++|++|+.||.|++||+.
T Consensus 91 ~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~ 169 (357)
T 4g56_B 91 VQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLS 169 (357)
T ss_dssp EECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred CCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 57899999999999985 6678889999999998876543 345789999999999999999999999999999999
Q ss_pred CCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec--cCCCCceEEEEEeCCCCCEEEEEeCCC
Q 038802 124 SRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL--FGHKDYVRCGDCSPVNGDMFVTGSYDH 201 (532)
Q Consensus 124 ~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~v~~i~~~~~~~~~l~s~s~dg 201 (532)
+++.+..+.+|...|.+++|+|....++++++.||.|++||++++++...+ ..|...+.+++|+|.++.+|++|+.|+
T Consensus 170 ~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~ 249 (357)
T 4g56_B 170 QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG 249 (357)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS
T ss_pred CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc
Confidence 999999999999999999999944568999999999999999998876654 457778999999995578999999999
Q ss_pred eEEEEEcccCCceeEEEecCCCcEEEEEEecCC-CEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCC
Q 038802 202 TVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSG-GLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNES 279 (532)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 279 (532)
.|++||+++++....+. .|...|.+++|+|++ ++|++++ |++|+|||+.++ +++..+ +|...|++++|+|..
T Consensus 250 ~i~~wd~~~~~~~~~~~-~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-~~~~~~-~H~~~V~~vafsP~d--- 323 (357)
T 4g56_B 250 NVSLVNIKNPDSAQTSA-VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-EVFRDL-SHRDFVTGVAWSPLD--- 323 (357)
T ss_dssp CEEEEESSCGGGCEEEC-CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-EEEEEC-CCSSCEEEEEECSSS---
T ss_pred ceeEEECCCCcEeEEEe-ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-cEeEEC-CCCCCEEEEEEeCCC---
Confidence 99999999876655554 788999999999987 5788888 899999999876 666554 899999999999843
Q ss_pred CccccccEEEEEecCCeEEEEECCCc
Q 038802 280 GEEAMQYRILSVALDGYMKVFDYGKM 305 (532)
Q Consensus 280 ~~~~~~~~l~s~~~dg~i~iwd~~~~ 305 (532)
+.+|++++.||.|++||+.+.
T Consensus 324 -----~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 324 -----HSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp -----TTEEEEEETTSCEEEEECC--
T ss_pred -----CCEEEEEcCCCeEEEEECCCC
Confidence 679999999999999998753
No 62
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.4e-37 Score=292.91 Aligned_cols=248 Identities=14% Similarity=0.188 Sum_probs=211.6
Q ss_pred ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCC--ceEEEEeeccCceeEEEEEcc--CCCEEEEEcCCCCEEEEE
Q 038802 46 QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQT--LEKHSAISSFKDVVTCSSFRP--DGSLLAASDLSGLIQVFD 121 (532)
Q Consensus 46 ~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~--~~~~~~~~~~~~~v~~~~~~~--~~~~l~~g~~dg~i~iwd 121 (532)
.+.+|.+.|++++|+|+|++|++|+.|+.|+|||+.+ .+....+.+|.+.|++++|++ ++++|++|+.||+|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 4578999999999999999999999999999999864 467788999999999999986 489999999999999999
Q ss_pred CCCCc--eEEEecCCCCCEEEEEeecCC--CcEEEEEeCCCeEEEEECCCCe--EEEeccCCCCceEEEEEeCC------
Q 038802 122 VKSRT--PLRRLKSHTRPVRFVKYPFLD--KLHLVSGGDDGIVKFWDVAGES--VVLDLFGHKDYVRCGDCSPV------ 189 (532)
Q Consensus 122 ~~~~~--~~~~~~~h~~~i~~~~~~~~~--~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~------ 189 (532)
+.+++ .+..+.+|...|.+++|+| + +.+|++|+.|++|++||++++. ....+.+|...|.+++|+|.
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAP-HEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred cCCCceEEEEEeecCCCceeEEEeCc-CCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 98763 5667888999999999999 5 7899999999999999998753 23556789999999999983
Q ss_pred ------CCCEEEEEeCCCeEEEEEcccCCce--e-EEEecCCCcEEEEEEecCC---CEEEEEc-CCeEEEEEccCCCe-
Q 038802 190 ------NGDMFVTGSYDHTVKLWDVRVENSK--S-VMEVNHGKPIEDVMFLPSG---GLIATAG-GNSVKIWDLIGGGK- 255 (532)
Q Consensus 190 ------~~~~l~s~s~dg~i~iwd~~~~~~~--~-~~~~~~~~~v~~i~~~~~~---~~l~~~~-d~~i~iwd~~~~~~- 255 (532)
++.+|++|+.|++|++||+++.... . ....+|...|.+++|+|++ .+|++++ |++|++||+.+...
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~ 242 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP 242 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc
Confidence 1579999999999999999875532 1 1223799999999999984 7899988 99999999976421
Q ss_pred -eeEEc--cCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECC
Q 038802 256 -MVYSM--ESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYG 303 (532)
Q Consensus 256 -~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 303 (532)
....+ ..|...|.+++|+|+ +.+|++++.||.|++|+..
T Consensus 243 ~~~~~~~~~~~~~~v~~~~~s~~---------g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 243 WKKTLLKEEKFPDVLWRASWSLS---------GNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CEEEESSSSCCSSCEEEEEECSS---------SCCEEEEETTSCEEEEEEC
T ss_pred cceeeeecccCCCcEEEEEECCC---------CCEEEEEcCCCcEEEEEEC
Confidence 12233 567889999999999 6789999999999999976
No 63
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.5e-37 Score=308.36 Aligned_cols=275 Identities=19% Similarity=0.364 Sum_probs=240.4
Q ss_pred CccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCce
Q 038802 48 PGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTP 127 (532)
Q Consensus 48 ~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~ 127 (532)
.+|...|+|+.| +++++++|+.||.|++||..+++....+.+|.+.|.+++| ++++|++|+.||.|++||+.+++.
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE
Confidence 457778999887 6889999999999999999999999999999999999998 788999999999999999999999
Q ss_pred EEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEE---EeccCCCCceEEEEEeCCCCCEEEEEeCCCeEE
Q 038802 128 LRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVV---LDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVK 204 (532)
Q Consensus 128 ~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~---~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~ 204 (532)
+..+.+|...|.+++|+ +..+++|+.||.|++||+.++... ..+.+|...|.++++ +++++++|+.||.|+
T Consensus 206 ~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~i~ 279 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIK 279 (435)
T ss_dssp EEEECCCCSCEEEEECC---TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ETTEEEEEETTSEEE
T ss_pred EEEEcCCCCcEEEEEEc---CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCeEE
Confidence 99999999999999996 358999999999999999887654 667889999999998 468999999999999
Q ss_pred EEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccc
Q 038802 205 LWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEA 283 (532)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 283 (532)
+||+++++....+. .|...|.++.++ +.++++++ ||.|++||++++ .++..+.+|...|.++++ +
T Consensus 280 vwd~~~~~~~~~~~-~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~--~-------- 345 (435)
T 1p22_A 280 VWNTSTCEFVRTLN-GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRF--D-------- 345 (435)
T ss_dssp EEETTTCCEEEEEE-CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEC--C--------
T ss_pred EEECCcCcEEEEEc-CCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCC-CEEEEEeCCcCcEEEEEe--c--------
Confidence 99999876665554 788999999984 67888888 999999999987 788899999999999999 3
Q ss_pred cccEEEEEecCCeEEEEECCCce---------EEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 284 MQYRILSVALDGYMKVFDYGKMK---------VTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 284 ~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+.++++|+.||.|++||+.++. ++..+. |.++|++++| ++.+|++|+.||.|++|++.+....
T Consensus 346 -~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~ 418 (435)
T 1p22_A 346 -NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAA 418 (435)
T ss_dssp -SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-------
T ss_pred -CCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCc
Confidence 5689999999999999997765 666665 8889999999 7889999999999999999876543
No 64
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=288.27 Aligned_cols=275 Identities=20% Similarity=0.301 Sum_probs=233.4
Q ss_pred eeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEee--ccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEe
Q 038802 54 INSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAIS--SFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRL 131 (532)
Q Consensus 54 V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 131 (532)
.++|+||+++ .|++| .|++|+|||..+++....+. +|...|++++|+|++++|++|+.||+|++||+.+++.+..+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 4789999986 56654 69999999999999887765 57788999999999999999999999999999999999999
Q ss_pred cCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC-eEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEccc
Q 038802 132 KSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE-SVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRV 210 (532)
Q Consensus 132 ~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~ 210 (532)
.+|...+.++.+ ++..+++|+.++.+++|+.... ..+..+.+|...+.++.+++ ++.++++++.||+|++||+++
T Consensus 106 ~~h~~~~~~~~~---~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 106 TSHSARVGSLSW---NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp ECCSSCEEEEEE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSC
T ss_pred cCccceEEEeec---CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC-CCCEEEEEecCcceeEEECCC
Confidence 999999988766 5678999999999999998865 45667789999999999999 999999999999999999987
Q ss_pred CCce---eEEEecCCCcEEEEEEecCCC-EE--EEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccc
Q 038802 211 ENSK---SVMEVNHGKPIEDVMFLPSGG-LI--ATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEA 283 (532)
Q Consensus 211 ~~~~---~~~~~~~~~~v~~i~~~~~~~-~l--~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 283 (532)
++.. ......+...|.++.++|++. .+ ++++ ++.|++||.... ..... ..+...+..+.|++.+
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~-~~~~~-~~~~~~v~~~~~~~~~------- 252 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG-ACLSA-VDAHSQVCSILWSPHY------- 252 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTC-CEEEE-EECSSCEEEEEEETTT-------
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccc-ccccc-ccceeeeeeeeecccc-------
Confidence 6533 233346788999999999665 33 3344 689999999876 33333 3567789999999984
Q ss_pred cccEEEE--EecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEeecC
Q 038802 284 MQYRILS--VALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKK 345 (532)
Q Consensus 284 ~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~ 345 (532)
..+++ ++.||.|++||+.+++++..+. |.++|++++|+|+|++|++|+.||.|++|++..
T Consensus 253 --~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 253 --KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp --TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred --cceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 44444 3479999999999999999987 889999999999999999999999999999864
No 65
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.1e-36 Score=303.70 Aligned_cols=278 Identities=19% Similarity=0.368 Sum_probs=248.8
Q ss_pred CccCccccCe-eEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECC
Q 038802 45 HQIPGLVSSI-NSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVK 123 (532)
Q Consensus 45 ~~~~~h~~~V-~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 123 (532)
..+.+|.+.| ++ ++++++++++|+.||.|++||..+++....+.+|.+.|.+++|+ ++++++|+.||+|++||+.
T Consensus 112 ~~l~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 112 KVLKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp EEEECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred EEecccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC
Confidence 3468899876 55 44568899999999999999999999999999999999999997 5699999999999999999
Q ss_pred CCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeE
Q 038802 124 SRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTV 203 (532)
Q Consensus 124 ~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i 203 (532)
+++.+..+.+|...|.++.|+ +..+++|+.||.|++||+.+++.+..+.+|...|.++++ ++.++++|+.||.|
T Consensus 188 ~~~~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i 261 (445)
T 2ovr_B 188 TGECIHTLYGHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMV 261 (445)
T ss_dssp TTEEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE---CSSCEEEEETTSCE
T ss_pred cCcEEEEECCCCCcEEEEEec---CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE---CCCEEEEEcCCCEE
Confidence 999999999999999999995 467999999999999999999999999999999999998 56889999999999
Q ss_pred EEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCcc
Q 038802 204 KLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEE 282 (532)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 282 (532)
++||+++++....+. .|...|.++.| ++.++++++ |+.|++||+.++ +++..+.+|...+.++.++
T Consensus 262 ~iwd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~--------- 328 (445)
T 2ovr_B 262 KVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG-NCIHTLTGHQSLTSGMELK--------- 328 (445)
T ss_dssp EEEEGGGTEEEEEEC-CCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC-CEEEEECCCCSCEEEEEEE---------
T ss_pred EEEECCCCcEeEEec-CCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCC-CEEEEEcCCcccEEEEEEe---------
Confidence 999999865544443 68899999999 788888888 999999999887 7888899999999988875
Q ss_pred ccccEEEEEecCCeEEEEECCCceEEEeee----cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 283 AMQYRILSVALDGYMKVFDYGKMKVTHSMR----FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 283 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+.++++++.||.|++||+.+++.+..+. |..+|++++|+ +.++++|+.||.|++|++.+++..
T Consensus 329 --~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 329 --DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFI 395 (445)
T ss_dssp --TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE
T ss_pred --CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCcee
Confidence 4589999999999999999999988886 66789999996 579999999999999999988654
No 66
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3e-36 Score=287.68 Aligned_cols=255 Identities=25% Similarity=0.429 Sum_probs=225.2
Q ss_pred ceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEE
Q 038802 83 LEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKF 162 (532)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~i 162 (532)
......+.+|.+.|++++|+|++++|++|+.||.|++|+..+++....+.+|...|.+++|+| ++++|++|+.|+.|++
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKI 91 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEE
Confidence 456677889999999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred EECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-
Q 038802 163 WDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG- 241 (532)
Q Consensus 163 wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~- 241 (532)
||+++++.+..+.+|...|.+++|+| +++++++|+.||.|++||+++++....+. .|..+|.+++|+|++.++++++
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEec-CCCCcEEEEEEcCCCCEEEEEeC
Confidence 99999999999999999999999999 99999999999999999999866554443 6889999999999999999998
Q ss_pred CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCe---
Q 038802 242 GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPL--- 317 (532)
Q Consensus 242 d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v--- 317 (532)
|+.|++||++++.........+...+..++|+|+ +.++++++.||.|++||+.+++.+..+. +...+
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 240 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN---------GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 240 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTT---------SSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCC
T ss_pred CCcEEEEECCCCceeeEEeccCCCceEEEEECCC---------CCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEE
Confidence 9999999999874333344567778999999999 6799999999999999999999888876 43332
Q ss_pred eEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 318 MSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 318 ~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
......+++.++++|+.||.|++|++.+++..
T Consensus 241 ~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 241 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp CEEEECSSSCEEEECCTTSCEEEEETTTCCEE
T ss_pred EEEEEeCCCcEEEEECCCCEEEEEECCCchhh
Confidence 22333467899999999999999999887654
No 67
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-37 Score=332.85 Aligned_cols=305 Identities=12% Similarity=0.095 Sum_probs=243.4
Q ss_pred CCCCCCcccccccCCCc--cCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCE
Q 038802 30 LSQTPESKYWSSFKPHQ--IPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSL 107 (532)
Q Consensus 30 ~~~~~~~~~w~~~~~~~--~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 107 (532)
.+.++.+++|+.-.... ...|..+|++++|+| +++|++++.|+.|++||+.+++.+..+. |.+.|++++|+|++++
T Consensus 35 gs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~ 112 (902)
T 2oaj_A 35 ATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDW 112 (902)
T ss_dssp EETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSE
T ss_pred EeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCE
Confidence 45778999998654432 245788999999999 8899999999999999999999888885 6789999999999999
Q ss_pred EEEEcCCCCEEEEECCCCceE-----------EEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccC
Q 038802 108 LAASDLSGLIQVFDVKSRTPL-----------RRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFG 176 (532)
Q Consensus 108 l~~g~~dg~i~iwd~~~~~~~-----------~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 176 (532)
|++|+.||+|++||+.++... ..+.+|.++|.+++|+|.+...+++|+.||.| +||+++++.+..+..
T Consensus 113 l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~ 191 (902)
T 2oaj_A 113 MLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIY 191 (902)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECC
T ss_pred EEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEec
Confidence 999999999999999987753 23467999999999999556789999999999 999999998888765
Q ss_pred C------------------CCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEe-----------------cC
Q 038802 177 H------------------KDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEV-----------------NH 221 (532)
Q Consensus 177 ~------------------~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-----------------~~ 221 (532)
| ...|.+++|+| ++.+|++|+.||+|++||+++++....... .+
T Consensus 192 ~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp-dg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~ 270 (902)
T 2oaj_A 192 ELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-NSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTN 270 (902)
T ss_dssp CBCTTCCCSTTCCCTTSCBCCCEEEEEECT-TSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSC
T ss_pred ccCCcCCCcccccccccccCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccc
Confidence 5 57899999999 899999999999999999865432110000 00
Q ss_pred CCcE----------------------------------------------------------------------------
Q 038802 222 GKPI---------------------------------------------------------------------------- 225 (532)
Q Consensus 222 ~~~v---------------------------------------------------------------------------- 225 (532)
..+|
T Consensus 271 ~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 350 (902)
T 2oaj_A 271 AAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILP 350 (902)
T ss_dssp CCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEE
T ss_pred cCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEE
Confidence 0011
Q ss_pred ------------------------------------------------------EEE-----------------------
Q 038802 226 ------------------------------------------------------EDV----------------------- 228 (532)
Q Consensus 226 ------------------------------------------------------~~i----------------------- 228 (532)
+++
T Consensus 351 ~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~ 430 (902)
T 2oaj_A 351 IPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYL 430 (902)
T ss_dssp CCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCS
T ss_pred CCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCc
Confidence 111
Q ss_pred -----------EEecCCCEEEEEc-CCeEEEEEccCCCe---eeEE--cc-----CCCcceEEEEEeccCCCCCcccccc
Q 038802 229 -----------MFLPSGGLIATAG-GNSVKIWDLIGGGK---MVYS--ME-----SHNKTVTSVCVGRVGNESGEEAMQY 286 (532)
Q Consensus 229 -----------~~~~~~~~l~~~~-d~~i~iwd~~~~~~---~~~~--~~-----~~~~~i~~~~~~~~~~~~~~~~~~~ 286 (532)
+|+|++++|++++ |++|++||+.++.. .... +. +|...|++++|+|+ +.
T Consensus 431 l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspd---------g~ 501 (902)
T 2oaj_A 431 LKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAE---------TL 501 (902)
T ss_dssp CCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETT---------TT
T ss_pred ccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCC---------CC
Confidence 1235566777777 78888888765421 0011 11 78889999999999 68
Q ss_pred EEEEEecCCeEEEEECCCc---------------------------------------------eEEEeee-cCCCeeEE
Q 038802 287 RILSVALDGYMKVFDYGKM---------------------------------------------KVTHSMR-FPAPLMSV 320 (532)
Q Consensus 287 ~l~s~~~dg~i~iwd~~~~---------------------------------------------~~~~~~~-~~~~v~~~ 320 (532)
+|++|+.||+|++||+.++ +++..+. |.+.|+++
T Consensus 502 ~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~sv 581 (902)
T 2oaj_A 502 ELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAI 581 (902)
T ss_dssp EEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEE
T ss_pred eEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEE
Confidence 9999999999999999765 2355555 88999999
Q ss_pred EEecCCCEEEEEecCCcEEEEeecCccc
Q 038802 321 AFSPDCMTRVIGTSNGTIFAGRRKKKEN 348 (532)
Q Consensus 321 ~~s~~~~~l~~g~~dg~i~iw~~~~~~~ 348 (532)
+|+||| +||+|+.||.|++||+.+...
T Consensus 582 afSpdG-~lAsgs~D~tv~lwd~~~~~~ 608 (902)
T 2oaj_A 582 NNSNIG-FVGIAYAAGSLMLIDRRGPAI 608 (902)
T ss_dssp EECBTS-EEEEEETTSEEEEEETTTTEE
T ss_pred EecCCc-EEEEEeCCCcEEEEECCCCeE
Confidence 999999 999999999999999877643
No 68
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-36 Score=299.43 Aligned_cols=247 Identities=21% Similarity=0.303 Sum_probs=216.9
Q ss_pred CeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEec
Q 038802 53 SINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLK 132 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 132 (532)
.|++++|+|+++++++|+.|+.|++||+.+++....+.+|...|++++|+|++++|++|+.||+|++||+.++++...+.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999998887776
Q ss_pred CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec-------cCCCCceEEEEEeCCCCCEEEEEeCCCeEEE
Q 038802 133 SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL-------FGHKDYVRCGDCSPVNGDMFVTGSYDHTVKL 205 (532)
Q Consensus 133 ~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-------~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~i 205 (532)
+...+.+++|+|.++.++++|+.||.|++||++++..+..+ .+|...|.+++|+| ++.+|++|+.||+|++
T Consensus 205 -~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~ 282 (393)
T 1erj_A 205 -IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKL 282 (393)
T ss_dssp -CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred -cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCCCEEEE
Confidence 66789999999878899999999999999999998877766 57999999999999 9999999999999999
Q ss_pred EEcccCCc-----------eeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEe
Q 038802 206 WDVRVENS-----------KSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVG 273 (532)
Q Consensus 206 wd~~~~~~-----------~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~ 273 (532)
||+++... ......+|...|.+++|+|++.+|++++ |+.|++||+.++ .++..+.+|...|.+++|+
T Consensus 283 wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~-~~~~~l~~h~~~v~~v~~~ 361 (393)
T 1erj_A 283 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG-NPLLMLQGHRNSVISVAVA 361 (393)
T ss_dssp EEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEEC
T ss_pred EECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC-eEEEEECCCCCCEEEEEec
Confidence 99976322 1122347889999999999999999999 999999999887 7788899999999999998
Q ss_pred ccCCCCCccccccEEEEEecCCeEEEEECCCc
Q 038802 274 RVGNESGEEAMQYRILSVALDGYMKVFDYGKM 305 (532)
Q Consensus 274 ~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 305 (532)
+.... .+.+.+|++|+.||.|++|++...
T Consensus 362 ~~~~~---~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 362 NGSSL---GPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp SSCTT---CTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CCcCc---CCCCCEEEEECCCCcEEECccccc
Confidence 74210 112678999999999999997643
No 69
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=6.9e-37 Score=296.05 Aligned_cols=298 Identities=12% Similarity=0.141 Sum_probs=225.1
Q ss_pred CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCc----eEEEEeeccCceeEEEEEcc--CCCEEEEEcCCCCEE
Q 038802 45 HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTL----EKHSAISSFKDVVTCSSFRP--DGSLLAASDLSGLIQ 118 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~g~~dg~i~ 118 (532)
..+.+|.+.|++++|+|++++|++|+.||.|++||+.++ +....+.+|...|++++|+| ++++|++|+.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 346799999999999999999999999999999999876 46777889999999999999 699999999999999
Q ss_pred EEECCCC---------ceEEEecCCCCCEEEEEeecCC--CcEEEEEeCCCeEEEEECCCCeEEEec-------------
Q 038802 119 VFDVKSR---------TPLRRLKSHTRPVRFVKYPFLD--KLHLVSGGDDGIVKFWDVAGESVVLDL------------- 174 (532)
Q Consensus 119 iwd~~~~---------~~~~~~~~h~~~i~~~~~~~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~------------- 174 (532)
+||+.++ +.+..+..|...|.+++|+| + +.++++++.||.|++||+++++.+..+
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 9999876 55788889999999999999 7 899999999999999999877643322
Q ss_pred cCCCCceEEEEEeCC--CCCEEEEEeCCCeEEEEEcccCCceeEEEe-cCCCcEEEEEEecCC----CEEEEEc-CCeEE
Q 038802 175 FGHKDYVRCGDCSPV--NGDMFVTGSYDHTVKLWDVRVENSKSVMEV-NHGKPIEDVMFLPSG----GLIATAG-GNSVK 246 (532)
Q Consensus 175 ~~~~~~v~~i~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~i~~~~~~----~~l~~~~-d~~i~ 246 (532)
..|...+.+++|+|. ++..+++++.|+.+.+|+...+........ .|...|.+++|+|++ .+|++++ ||.|+
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence 268889999999993 389999999999998888776554333333 689999999999998 7898888 99999
Q ss_pred EEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecC
Q 038802 247 IWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPD 325 (532)
Q Consensus 247 iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~ 325 (532)
+||++... .......+.........++.... .......+.....+.+|+..+.+.+..+. |...|++++|+|+
T Consensus 244 iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 317 (351)
T 3f3f_A 244 IFKITEKL-SPLASEESLTNSNMFDNSADVDM-----DAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLT 317 (351)
T ss_dssp EEEEEECC---------------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSS
T ss_pred EEeCCCCc-CccccCCcccceeccCCCccccc-----ccccccccccceeeeecccccccEEEEEecccccEEEEEEcCC
Confidence 99998763 22222223333333333332100 01112233345566777777777787777 7889999999999
Q ss_pred CCEEEEEecCCcEEEEeecCcccc
Q 038802 326 CMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 326 ~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+++|++|+.||.|++|++.+++..
T Consensus 318 ~~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 318 GTILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp SCCEEEEETTSCEEEEEECTTSCE
T ss_pred CCEEEEecCCCcEEEEecCcCcch
Confidence 999999999999999999876543
No 70
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=9.7e-36 Score=300.57 Aligned_cols=293 Identities=15% Similarity=0.228 Sum_probs=250.4
Q ss_pred CCCCCCcccccccCCC---ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEc--cC
Q 038802 30 LSQTPESKYWSSFKPH---QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFR--PD 104 (532)
Q Consensus 30 ~~~~~~~~~w~~~~~~---~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~--~~ 104 (532)
.+.++.+++|+..... .+.+|.++|++++|+|++ ++++|+.||.|++||+.+++....+.+|.+.|.+++|+ ++
T Consensus 138 gs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 216 (464)
T 3v7d_B 138 GADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKN 216 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSS
T ss_pred EcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCC
Confidence 4678899999965543 357899999999999988 89999999999999999999999999999999999999 47
Q ss_pred CCEEEEEcCCCCEEEEECCCCce-----------------------EEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEE
Q 038802 105 GSLLAASDLSGLIQVFDVKSRTP-----------------------LRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVK 161 (532)
Q Consensus 105 ~~~l~~g~~dg~i~iwd~~~~~~-----------------------~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~ 161 (532)
++++++|+.||.|++||+.++.. +..+.+|...|.++. + ++.++++|+.||.|+
T Consensus 217 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~-~~~~l~~~~~d~~i~ 293 (464)
T 3v7d_B 217 IKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--G-HGNIVVSGSYDNTLI 293 (464)
T ss_dssp CEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--E-ETTEEEEEETTSCEE
T ss_pred CCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--C-CCCEEEEEeCCCeEE
Confidence 89999999999999999987642 556778999998884 4 778999999999999
Q ss_pred EEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc
Q 038802 162 FWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG 241 (532)
Q Consensus 162 iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 241 (532)
+||+.+++.+..+.+|...|.+++|+| +++++++|+.||.|++||+++++....+. .|...|.+++|+ +.++++++
T Consensus 294 vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~--~~~l~s~s 369 (464)
T 3v7d_B 294 VWDVAQMKCLYILSGHTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELMYTLQ-GHTALVGLLRLS--DKFLVSAA 369 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEC--SSEEEEEE
T ss_pred EEECCCCcEEEEecCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEEEEEe-CCCCcEEEEEEc--CCEEEEEe
Confidence 999999999999999999999999999 99999999999999999999865554444 789999999997 57888887
Q ss_pred -CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEee--ecCCCee
Q 038802 242 -GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSM--RFPAPLM 318 (532)
Q Consensus 242 -d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~v~ 318 (532)
||.|++||+.+.. ..... .|...+..++|+++ +.++++++ ||.|++||+.+++.+..+ .+..+|.
T Consensus 370 ~dg~v~vwd~~~~~-~~~~~-~~~~~~~~~~~~~~---------~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~ 437 (464)
T 3v7d_B 370 ADGSIRGWDANDYS-RKFSY-HHTNLSAITTFYVS---------DNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIW 437 (464)
T ss_dssp TTSEEEEEETTTCC-EEEEE-ECTTCCCEEEEEEC---------SSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEE
T ss_pred CCCcEEEEECCCCc-eeeee-cCCCCccEEEEEeC---------CCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEE
Confidence 9999999998873 33333 35667788899998 57888887 999999999999999863 4778999
Q ss_pred EEEEecCCCEEEEEecCCcEEEEee
Q 038802 319 SVAFSPDCMTRVIGTSNGTIFAGRR 343 (532)
Q Consensus 319 ~~~~s~~~~~l~~g~~dg~i~iw~~ 343 (532)
+++|+ ++..+++++.||.+.+|-+
T Consensus 438 ~v~~~-~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 438 SVNFK-GKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp EEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred EEEec-CCEEEEEEEeCCeEEEEEe
Confidence 99998 4456666677777666544
No 71
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.1e-37 Score=295.96 Aligned_cols=248 Identities=17% Similarity=0.178 Sum_probs=205.6
Q ss_pred ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCce--EEEEeeccCceeEEEEEcc--CCCEEEEEcCCCCEEEEE
Q 038802 46 QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLE--KHSAISSFKDVVTCSSFRP--DGSLLAASDLSGLIQVFD 121 (532)
Q Consensus 46 ~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~g~~dg~i~iwd 121 (532)
.+.+|.++|++++|+|+|++|++|+.|+.|++||+.++. ....+.+|.+.|++++|+| ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 457999999999999999999999999999999998764 4677899999999999986 489999999999999999
Q ss_pred CCCC--ceEEEecCCCCCEEEEEeecCC-CcEEEEEeCCCeEEEEECCCCeE---EEeccCCCCceEEEEEeCCC-----
Q 038802 122 VKSR--TPLRRLKSHTRPVRFVKYPFLD-KLHLVSGGDDGIVKFWDVAGESV---VLDLFGHKDYVRCGDCSPVN----- 190 (532)
Q Consensus 122 ~~~~--~~~~~~~~h~~~i~~~~~~~~~-~~~l~s~s~dg~i~iwd~~~~~~---~~~~~~~~~~v~~i~~~~~~----- 190 (532)
+.++ .....+.+|...|.+++|+|.. +.+|++|+.|++|++||++.+.. ...+.+|...|.+++|+| +
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~ 166 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAP-AVVPGS 166 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECC-CCCC--
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcc-ccCCcc
Confidence 9876 4567788999999999999932 78999999999999999987632 345678999999999998 4
Q ss_pred ------------CCEEEEEeCCCeEEEEEcccCCc-eeEE-EecCCCcEEEEEEecCC----CEEEEEc-CCeEEEEEcc
Q 038802 191 ------------GDMFVTGSYDHTVKLWDVRVENS-KSVM-EVNHGKPIEDVMFLPSG----GLIATAG-GNSVKIWDLI 251 (532)
Q Consensus 191 ------------~~~l~s~s~dg~i~iwd~~~~~~-~~~~-~~~~~~~v~~i~~~~~~----~~l~~~~-d~~i~iwd~~ 251 (532)
+.+|++|+.|++|++||++.... .... ...|...|.+++|+|++ .+|++++ |++|++||+.
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence 46899999999999999975422 1222 23689999999999986 7899988 9999999987
Q ss_pred CCC---eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECC
Q 038802 252 GGG---KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYG 303 (532)
Q Consensus 252 ~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 303 (532)
+.. .....+..|...|.+++|+|+ +.+|++++.||.|++|+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~v~~v~~sp~---------g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 247 DASSNTWSPKLLHKFNDVVWHVSWSIT---------ANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp STTCCCCBCCEEEECSSCEEEEEECTT---------TCCEEEEESSSCEEEEEEC
T ss_pred CccccchhhhhhhcCCCcEEEEEEcCC---------CCEEEEEcCCCeEEEEEEC
Confidence 621 122334568899999999999 6789999999999999975
No 72
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.4e-37 Score=295.61 Aligned_cols=252 Identities=19% Similarity=0.227 Sum_probs=207.7
Q ss_pred EeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCc--eEEEecCCCCCEEEEEeecC-CCcEEEEEeCCCeEEEEE
Q 038802 88 AISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRT--PLRRLKSHTRPVRFVKYPFL-DKLHLVSGGDDGIVKFWD 164 (532)
Q Consensus 88 ~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~h~~~i~~~~~~~~-~~~~l~s~s~dg~i~iwd 164 (532)
.+.+|.+.|++++|+|+|++||+|+.|++|++||+.++. .+..+.+|.++|.+++|++. ++.+|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456899999999999999999999999999999998764 46778999999999999752 478999999999999999
Q ss_pred CCCC--eEEEeccCCCCceEEEEEeCCC--CCEEEEEeCCCeEEEEEcccCCce--eEEEecCCCcEEEEEEecC-----
Q 038802 165 VAGE--SVVLDLFGHKDYVRCGDCSPVN--GDMFVTGSYDHTVKLWDVRVENSK--SVMEVNHGKPIEDVMFLPS----- 233 (532)
Q Consensus 165 ~~~~--~~~~~~~~~~~~v~~i~~~~~~--~~~l~s~s~dg~i~iwd~~~~~~~--~~~~~~~~~~v~~i~~~~~----- 233 (532)
++++ .....+.+|...|.+++|+| + +.+|++|+.|++|++||++..... ......|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p-~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAP-HDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECC-TTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred CCCCcceEEEEccCCCCceEEEEECC-CCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 9887 46677889999999999999 5 789999999999999999875322 1222368889999999997
Q ss_pred ------------CCEEEEEc-CCeEEEEEccCCC--eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEE
Q 038802 234 ------------GGLIATAG-GNSVKIWDLIGGG--KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMK 298 (532)
Q Consensus 234 ------------~~~l~~~~-d~~i~iwd~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~ 298 (532)
+.+|++++ |+.|++||+.... .+...+.+|...|.+++|+|++.. .+.+|++++.||+|+
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~-----~~~~las~s~D~~v~ 241 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGL-----PTSTIASCSQDGRVF 241 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSC-----SCCEEEEEETTCEEE
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCC-----CCceEEEEcCCCeEE
Confidence 46888888 9999999997542 467788899999999999998410 136899999999999
Q ss_pred EEECCCc---e--EEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeecC
Q 038802 299 VFDYGKM---K--VTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKK 345 (532)
Q Consensus 299 iwd~~~~---~--~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~ 345 (532)
+||+.+. . ......|...|++++|+|+|++|++|+.||.|++|+...
T Consensus 242 iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 242 IWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 9998762 1 111224778999999999999999999999999999863
No 73
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=294.68 Aligned_cols=284 Identities=16% Similarity=0.197 Sum_probs=239.0
Q ss_pred ccCccccCeeEEEEcCC---CCeEEEEEeCCeEEEEeCCC-ceEE-EEeeccCceeEEEEEccCCCEEEEEcCCCCEEEE
Q 038802 46 QIPGLVSSINSIVFSPT---TSHLFAATHSASLTLFSSQT-LEKH-SAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVF 120 (532)
Q Consensus 46 ~~~~h~~~V~~i~~sp~---~~~l~~~~~d~~v~i~~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iw 120 (532)
.+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+ +... ..+.+|...|++++|+|++++|++|+.||.|++|
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 113 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW 113 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence 46799999999999999 58999999999999999987 5444 7788999999999999999999999999999999
Q ss_pred ECCCCceEEEecCCCCCEEEEEe--ecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEe
Q 038802 121 DVKSRTPLRRLKSHTRPVRFVKY--PFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGS 198 (532)
Q Consensus 121 d~~~~~~~~~~~~h~~~i~~~~~--~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s 198 (532)
|+.+++.+. +..|...|.+++| +| ++.++++++.||.|++||+++++.+..+..+. .+.++.+.+ ..+++++
T Consensus 114 d~~~~~~~~-~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~ 187 (368)
T 3mmy_A 114 DLSSNQAIQ-IAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIY---PMAVVAT 187 (368)
T ss_dssp ETTTTEEEE-EEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEET---TEEEEEE
T ss_pred EcCCCCcee-eccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecC---CeeEEEe
Confidence 999888766 5569999999999 77 88899999999999999999998888887665 566666654 5888899
Q ss_pred CCCeEEEEEcccCCceeEEE-ecCCCcEEEEEEecCCCE----EEEEc-CCeEEEEEccCCC--eeeEEccCCCc-----
Q 038802 199 YDHTVKLWDVRVENSKSVME-VNHGKPIEDVMFLPSGGL----IATAG-GNSVKIWDLIGGG--KMVYSMESHNK----- 265 (532)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~----l~~~~-d~~i~iwd~~~~~--~~~~~~~~~~~----- 265 (532)
.++.+.+||++......... ..+...+.++.+.++... +++++ |+.|++||+.... .....+..|..
T Consensus 188 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (368)
T 3mmy_A 188 AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNT 267 (368)
T ss_dssp GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----
T ss_pred CCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccc
Confidence 99999999998754332222 234556677777665543 77777 9999999998653 34566667766
Q ss_pred -------ceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCc
Q 038802 266 -------TVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGT 337 (532)
Q Consensus 266 -------~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~ 337 (532)
.|++++|+|+ +.+|++++.||.|++||+.+++++..+. |..+|.+++|+|+|++|++|+.||.
T Consensus 268 ~~~~~~~~v~~~~~sp~---------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 268 SAPQDIYAVNGIAFHPV---------HGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp CCCEEECCEEEEEECTT---------TCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCS
T ss_pred cccccccceEEEEEecC---------CCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccc
Confidence 7999999998 6789999999999999999999998887 7889999999999999999999986
Q ss_pred EEEEeec
Q 038802 338 IFAGRRK 344 (532)
Q Consensus 338 i~iw~~~ 344 (532)
...|++-
T Consensus 339 ~~~~~~~ 345 (368)
T 3mmy_A 339 SKGHEFY 345 (368)
T ss_dssp TTCGGGC
T ss_pred ccccccc
Confidence 6655544
No 74
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.1e-36 Score=313.51 Aligned_cols=283 Identities=16% Similarity=0.198 Sum_probs=253.4
Q ss_pred CccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCc----eEEEEeeccCce-eEEEEEcc--CCCEEEEEcCCCCEEEE
Q 038802 48 PGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTL----EKHSAISSFKDV-VTCSSFRP--DGSLLAASDLSGLIQVF 120 (532)
Q Consensus 48 ~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~----~~~~~~~~~~~~-v~~~~~~~--~~~~l~~g~~dg~i~iw 120 (532)
..|.+.|++++|+|+++++++++ ++.|.+||+.++ +....+.+|.+. |++++|+| ++++|++|+.||.|++|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 36788999999999999999988 799999999998 889999999999 99999999 99999999999999999
Q ss_pred ECCCC--------ceEEEecCCCCCEEEEEeecCCCcEEEEEeCC----CeEEEEECCCCeEEEeccCCCCceEEEEEeC
Q 038802 121 DVKSR--------TPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDD----GIVKFWDVAGESVVLDLFGHKDYVRCGDCSP 188 (532)
Q Consensus 121 d~~~~--------~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~ 188 (532)
|+.++ .....+..|..+|.+++|+| ++.++++++.+ +.|.+|| .++.+..+.+|...|.+++|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~ 170 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQ 170 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECS
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeC-CCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECC
Confidence 99744 67778889999999999999 89999999988 7888888 5678888999999999999999
Q ss_pred CCCC-EEEEEeCCCeEEEEEcccCCceeEEEecCCC---cEEEEEEecC-CCEEEEEc-CCeEEEEEccCCCeeeEEc-c
Q 038802 189 VNGD-MFVTGSYDHTVKLWDVRVENSKSVMEVNHGK---PIEDVMFLPS-GGLIATAG-GNSVKIWDLIGGGKMVYSM-E 261 (532)
Q Consensus 189 ~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~---~v~~i~~~~~-~~~l~~~~-d~~i~iwd~~~~~~~~~~~-~ 261 (532)
++. .+++++.|+.|++||+.+.+....+. .|.. .|.+++|+|+ ++++++++ |+.|++||+.++ +.+..+ .
T Consensus 171 -~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~ 247 (615)
T 1pgu_A 171 -SRPMRSMTVGDDGSVVFYQGPPFKFSASDR-THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG-EFLKYIED 247 (615)
T ss_dssp -SSSCEEEEEETTTEEEEEETTTBEEEEEEC-SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC-CEEEECCB
T ss_pred -CCCcEEEEEeCCCcEEEEeCCCcceeeeec-ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC-CEeEEecc
Confidence 665 89999999999999998755444433 5777 8999999999 99999988 899999999887 677777 6
Q ss_pred ---CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecC-----CCeeEEEEecCCCEEEEEe
Q 038802 262 ---SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFP-----APLMSVAFSPDCMTRVIGT 333 (532)
Q Consensus 262 ---~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~g~ 333 (532)
.|...|.+++|+ + +.++++++.||.|++||+.+++.+..+... ..+.++.|+ ++.++++|+
T Consensus 248 ~~~~~~~~v~~~~~~-~---------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~ 316 (615)
T 1pgu_A 248 DQEPVQGGIFALSWL-D---------SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLS 316 (615)
T ss_dssp TTBCCCSCEEEEEES-S---------SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEE
T ss_pred cccccCCceEEEEEc-C---------CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEE
Confidence 899999999999 6 689999999999999999999999888754 678888886 889999999
Q ss_pred cCCcEEEEeecCccc
Q 038802 334 SNGTIFAGRRKKKEN 348 (532)
Q Consensus 334 ~dg~i~iw~~~~~~~ 348 (532)
.||.|++|++.+.+.
T Consensus 317 ~~g~i~~~d~~~~~~ 331 (615)
T 1pgu_A 317 LDGTLNFYELGHDEV 331 (615)
T ss_dssp TTSCEEEEETTEEEE
T ss_pred CCCCEEEEECCCCcE
Confidence 999999999987543
No 75
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=6.3e-37 Score=303.27 Aligned_cols=284 Identities=15% Similarity=0.183 Sum_probs=238.7
Q ss_pred cCeeEEEEcCCCCeEE-EEEeCCeEEEEeCCCce----EEEEeeccCceeEEEEEcc-CCCEEEEEcCCCCEEEEECCCC
Q 038802 52 SSINSIVFSPTTSHLF-AATHSASLTLFSSQTLE----KHSAISSFKDVVTCSSFRP-DGSLLAASDLSGLIQVFDVKSR 125 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~-~~~~d~~v~i~~~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~dg~i~iwd~~~~ 125 (532)
.....++++|+...++ +++.||.|+||++.... ....+.+|.+.|++++|+| ++++|++|+.||.|++||+.++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 3455789999875444 46789999999986542 3445778999999999999 9999999999999999999887
Q ss_pred -------ceEEEecCCCCCEEEEEeecCCC-cEEEEEeCCCeEEEEECCCCeEEEec--cCCCCceEEEEEeCCCCCEEE
Q 038802 126 -------TPLRRLKSHTRPVRFVKYPFLDK-LHLVSGGDDGIVKFWDVAGESVVLDL--FGHKDYVRCGDCSPVNGDMFV 195 (532)
Q Consensus 126 -------~~~~~~~~h~~~i~~~~~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~v~~i~~~~~~~~~l~ 195 (532)
+.+..+.+|...|.+++|+| ++ .+|++|+.||.|++||+.+++.+..+ ..|...|.+++|+| ++.+|+
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~ 192 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHP-TAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALIC 192 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECS-SBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-TSSCEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECc-CCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-CCCEEE
Confidence 66888999999999999999 65 79999999999999999999999998 88999999999999 999999
Q ss_pred EEeCCCeEEEEEcccCCceeEEEecCCCc-EEEEEEecCCCEEEEE---c-CCeEEEEEccCCCeeeEEc-cCCCcceEE
Q 038802 196 TGSYDHTVKLWDVRVENSKSVMEVNHGKP-IEDVMFLPSGGLIATA---G-GNSVKIWDLIGGGKMVYSM-ESHNKTVTS 269 (532)
Q Consensus 196 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~l~~~---~-d~~i~iwd~~~~~~~~~~~-~~~~~~i~~ 269 (532)
+++.||.|++||+++++........|... +.++.|+|++.+++++ + |+.|++||+++...+.... ..|...+.+
T Consensus 193 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 272 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLL 272 (402)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEE
T ss_pred EEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeE
Confidence 99999999999999866555553466655 8999999999999998 5 8999999998864433333 357778999
Q ss_pred EEEeccCCCCCccccccEEE-EEecCCeEEEEECCCce----EEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeec
Q 038802 270 VCVGRVGNESGEEAMQYRIL-SVALDGYMKVFDYGKMK----VTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRK 344 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~ 344 (532)
++|+|++ .+++ +++.||.|++||+.+++ .+..+.+..+|.+++|+|++.++++ .++.+++|++.
T Consensus 273 ~~~s~~~---------~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~ 341 (402)
T 2aq5_A 273 PFFDPDT---------NIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLH 341 (402)
T ss_dssp EEEETTT---------TEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEE
T ss_pred EEEcCCC---------CEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcC
Confidence 9999994 5564 56679999999999876 3344446689999999999998764 57799999998
Q ss_pred Cccc
Q 038802 345 KKEN 348 (532)
Q Consensus 345 ~~~~ 348 (532)
+++.
T Consensus 342 ~~~~ 345 (402)
T 2aq5_A 342 ERKC 345 (402)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 8643
No 76
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-36 Score=326.10 Aligned_cols=301 Identities=13% Similarity=0.110 Sum_probs=235.6
Q ss_pred CCCCCcccccccCC--------------CccCccccCeeEEEEcCC-CCeEEEEEeCCeEEEEeCCCceEEEEeecc---
Q 038802 31 SQTPESKYWSSFKP--------------HQIPGLVSSINSIVFSPT-TSHLFAATHSASLTLFSSQTLEKHSAISSF--- 92 (532)
Q Consensus 31 ~~~~~~~~w~~~~~--------------~~~~~h~~~V~~i~~sp~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~--- 92 (532)
..++.+++|+.-.. ..+.+|.++|++++|+|+ +..+++|+.||.| +||+.+++....+..|
T Consensus 117 s~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~ 195 (902)
T 2oaj_A 117 LQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPP 195 (902)
T ss_dssp ETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCT
T ss_pred cCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCC
Confidence 56788999986433 234789999999999996 4689999999999 9999999988888765
Q ss_pred ---------------CceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEE--ec---C-------------CCCCEE
Q 038802 93 ---------------KDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRR--LK---S-------------HTRPVR 139 (532)
Q Consensus 93 ---------------~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~--~~---~-------------h~~~i~ 139 (532)
...|++++|+|+|++|++|+.||+|++||+.+++++.. +. . |..+|.
T Consensus 196 g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~ 275 (902)
T 2oaj_A 196 FAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKIS 275 (902)
T ss_dssp TCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEE
T ss_pred cCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCee
Confidence 47899999999999999999999999999998887653 21 1 345799
Q ss_pred EEEeecC---C-CcEEEEEeC-----------------------------------------------------------
Q 038802 140 FVKYPFL---D-KLHLVSGGD----------------------------------------------------------- 156 (532)
Q Consensus 140 ~~~~~~~---~-~~~l~s~s~----------------------------------------------------------- 156 (532)
+++|++. + +..+++|+.
T Consensus 276 ~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~s 355 (902)
T 2oaj_A 276 KVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQS 355 (902)
T ss_dssp EEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSC
T ss_pred EEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCC
Confidence 9999541 2 234555533
Q ss_pred -----------------CCeEEEEECCCCeEEEe-------ccCCCCceEE-----------------------------
Q 038802 157 -----------------DGIVKFWDVAGESVVLD-------LFGHKDYVRC----------------------------- 183 (532)
Q Consensus 157 -----------------dg~i~iwd~~~~~~~~~-------~~~~~~~v~~----------------------------- 183 (532)
||.|++||+.++..... +..|...|++
T Consensus 356 p~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~ 435 (902)
T 2oaj_A 356 PYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGV 435 (902)
T ss_dssp SHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSB
T ss_pred CCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCc
Confidence 34455555544432211 1223334444
Q ss_pred -----EEEeCCCCCEEEEEeCCCeEEEEEcccCCce--eEEE--------ecCCCcEEEEEEecCCCEEEEEc-CCeEEE
Q 038802 184 -----GDCSPVNGDMFVTGSYDHTVKLWDVRVENSK--SVME--------VNHGKPIEDVMFLPSGGLIATAG-GNSVKI 247 (532)
Q Consensus 184 -----i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~--~~~~--------~~~~~~v~~i~~~~~~~~l~~~~-d~~i~i 247 (532)
++|+| ++++|++|+.|++|++||+.++... ..+. .+|...|.+++|+|++++||+++ ||+|++
T Consensus 436 ~~v~sv~~sp-dg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~l 514 (902)
T 2oaj_A 436 RTKRQKLPAE-YGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVL 514 (902)
T ss_dssp CCCCCCCCCS-EEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred CCCCcccccc-cCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEE
Confidence 44567 7889999999999999999876422 1121 16888999999999999999999 999999
Q ss_pred EEccCCC--------------------------------------------eeeEEccCCCcceEEEEEeccCCCCCccc
Q 038802 248 WDLIGGG--------------------------------------------KMVYSMESHNKTVTSVCVGRVGNESGEEA 283 (532)
Q Consensus 248 wd~~~~~--------------------------------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 283 (532)
||+.++. .++..+.+|.+.|++++|+|+
T Consensus 515 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpd-------- 586 (902)
T 2oaj_A 515 FKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNI-------- 586 (902)
T ss_dssp EEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBT--------
T ss_pred EEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCC--------
Confidence 9997651 246778889999999999999
Q ss_pred cccEEEEEecCCeEEEEECCCceEEEe-----e--ecCCCeeEEEEe-----cCC---CEEEEEecCCcEEEEee
Q 038802 284 MQYRILSVALDGYMKVFDYGKMKVTHS-----M--RFPAPLMSVAFS-----PDC---MTRVIGTSNGTIFAGRR 343 (532)
Q Consensus 284 ~~~~l~s~~~dg~i~iwd~~~~~~~~~-----~--~~~~~v~~~~~s-----~~~---~~l~~g~~dg~i~iw~~ 343 (532)
+ +|++|+.|++|++||+.+...+.. + .|...|++++|+ ||| ++|++|+.||+|++|++
T Consensus 587 -G-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 587 -G-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp -S-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred -c-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 7 999999999999999999887642 2 366789999999 885 89999999999999999
No 77
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.1e-36 Score=338.61 Aligned_cols=306 Identities=17% Similarity=0.255 Sum_probs=266.4
Q ss_pred CCCCCcccccccCCC---ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEcc--CC
Q 038802 31 SQTPESKYWSSFKPH---QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRP--DG 105 (532)
Q Consensus 31 ~~~~~~~~w~~~~~~---~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~--~~ 105 (532)
+.++.+++|+..... .+.+|.+.|++++|+|+++++++++.||.|++||+.+++.+..+.+|...|.+++|+| ++
T Consensus 634 ~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 713 (1249)
T 3sfz_A 634 GADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNH 713 (1249)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSC
T ss_pred eCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCc
Confidence 567889999976543 4588999999999999999999999999999999999999999999999999999999 55
Q ss_pred CEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec-----------
Q 038802 106 SLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL----------- 174 (532)
Q Consensus 106 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~----------- 174 (532)
.++++|+.||.|++||+.+++++..+.+|.+.|.+++|+| ++..+++|+.||.|++||+.+++....+
T Consensus 714 ~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 792 (1249)
T 3sfz_A 714 LLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSED 792 (1249)
T ss_dssp CEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC-----
T ss_pred eEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEec-CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCC
Confidence 6899999999999999999999999999999999999999 9999999999999999999776543322
Q ss_pred --------------------------------------------cCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEccc
Q 038802 175 --------------------------------------------FGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRV 210 (532)
Q Consensus 175 --------------------------------------------~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~ 210 (532)
.+|...|.+++|+| ++.++++++.||.|++||+.+
T Consensus 793 ~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~dg~v~vwd~~~ 871 (1249)
T 3sfz_A 793 PPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP-YDHLAVIALSQYCVELWNIDS 871 (1249)
T ss_dssp ---CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECS-STTEEEEECSSSCEEEEETTT
T ss_pred ccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEEcCC
Confidence 16788899999999 999999999999999999988
Q ss_pred CCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCC------------------------------------
Q 038802 211 ENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGG------------------------------------ 253 (532)
Q Consensus 211 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~------------------------------------ 253 (532)
+....... +|...|.+++|+|++.++++++ |+.|++||+.+.
T Consensus 872 ~~~~~~~~-~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 950 (1249)
T 3sfz_A 872 RLKVADCR-GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIA 950 (1249)
T ss_dssp TEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEE
T ss_pred CceeeecC-CCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEe
Confidence 55444433 7888999999999999888888 888999985420
Q ss_pred ------------------------------------------CeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEE
Q 038802 254 ------------------------------------------GKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSV 291 (532)
Q Consensus 254 ------------------------------------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~ 291 (532)
+.....+.+|...|++++|+|+ +.+++++
T Consensus 951 ~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d---------g~~l~s~ 1021 (1249)
T 3sfz_A 951 GKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTAD---------GKTLISS 1021 (1249)
T ss_dssp ESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSS---------SSCEEEE
T ss_pred cCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCC---------CCEEEEE
Confidence 1233445678888888999888 6789999
Q ss_pred ecCCeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 292 ALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 292 ~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+.||.|++||+.+++......+...|.+++|+|++ .+++++.||.|++|++.+++..
T Consensus 1022 ~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~ 1078 (1249)
T 3sfz_A 1022 SEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIE 1078 (1249)
T ss_dssp CSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCC
T ss_pred cCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCC-cEEEEECCCcEEEEECCCCcee
Confidence 99999999999999988877799999999999975 6788999999999999887543
No 78
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=8.8e-36 Score=311.72 Aligned_cols=292 Identities=19% Similarity=0.271 Sum_probs=251.5
Q ss_pred CCCcccccccCC-------CccCccccC-eeEEEEcC--CCCeEEEEEeCCeEEEEeCCCc--------eEEEEeeccCc
Q 038802 33 TPESKYWSSFKP-------HQIPGLVSS-INSIVFSP--TTSHLFAATHSASLTLFSSQTL--------EKHSAISSFKD 94 (532)
Q Consensus 33 ~~~~~~w~~~~~-------~~~~~h~~~-V~~i~~sp--~~~~l~~~~~d~~v~i~~~~~~--------~~~~~~~~~~~ 94 (532)
++.+.+|+.-.. ..+.+|.+. |++++|+| ++++|++++.||.|++||+.++ .....+..|..
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~ 117 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAG 117 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSS
T ss_pred CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccc
Confidence 567889986544 345889999 99999999 9999999999999999999744 67778888999
Q ss_pred eeEEEEEccCCCEEEEEcCC----CCEEEEECCCCceEEEecCCCCCEEEEEeecCCCc-EEEEEeCCCeEEEEECCCCe
Q 038802 95 VVTCSSFRPDGSLLAASDLS----GLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKL-HLVSGGDDGIVKFWDVAGES 169 (532)
Q Consensus 95 ~v~~~~~~~~~~~l~~g~~d----g~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~-~l~s~s~dg~i~iwd~~~~~ 169 (532)
.|.+++|+|++++|++++.+ +.|.+|| .++.+..+.+|...|.+++|+| ++. .+++++.|+.|++||+.+++
T Consensus 118 ~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~ 194 (615)
T 1pgu_A 118 PISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQ-SRPMRSMTVGDDGSVVFYQGPPFK 194 (615)
T ss_dssp CEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECS-SSSCEEEEEETTTEEEEEETTTBE
T ss_pred cEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECC-CCCcEEEEEeCCCcEEEEeCCCcc
Confidence 99999999999999999887 6788887 6678889999999999999999 665 89999999999999999999
Q ss_pred EEEeccCCCC---ceEEEEEeCCC-CCEEEEEeCCCeEEEEEcccCCceeEEEe---cCCCcEEEEEEecCCCEEEEEc-
Q 038802 170 VVLDLFGHKD---YVRCGDCSPVN-GDMFVTGSYDHTVKLWDVRVENSKSVMEV---NHGKPIEDVMFLPSGGLIATAG- 241 (532)
Q Consensus 170 ~~~~~~~~~~---~v~~i~~~~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~~~v~~i~~~~~~~~l~~~~- 241 (532)
.+..+.+|.. .|.+++|+| + ++++++++.||.|++||+++++....+.. .|..+|.+++|+ ++.++++++
T Consensus 195 ~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~ 272 (615)
T 1pgu_A 195 FSASDRTHHKQGSFVRDVEFSP-DSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGA 272 (615)
T ss_dssp EEEEECSSSCTTCCEEEEEECS-TTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEET
T ss_pred eeeeecccCCCCceEEEEEECC-CCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcC
Confidence 9999999999 999999999 7 99999999999999999998665555433 789999999999 999999998
Q ss_pred CCeEEEEEccCCCeeeEEccCC----CcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCC
Q 038802 242 GNSVKIWDLIGGGKMVYSMESH----NKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAP 316 (532)
Q Consensus 242 d~~i~iwd~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~ 316 (532)
|+.|++||+.++ +.+..+..+ ...+.++.+. + +.++++++.||.|++||+.+++.+..+. |..+
T Consensus 273 d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 341 (615)
T 1pgu_A 273 DATIRVWDVTTS-KCVQKWTLDKQQLGNQQVGVVAT-G---------NGRIISLSLDGTLNFYELGHDEVLKTISGHNKG 341 (615)
T ss_dssp TSEEEEEETTTT-EEEEEEECCTTCGGGCEEEEEEE-E---------TTEEEEEETTSCEEEEETTEEEEEEEECCCSSC
T ss_pred CCcEEEEECCCC-cEEEEEcCCCCcccCceeEEEeC-C---------CCeEEEEECCCCEEEEECCCCcEEEEEeCCCCC
Confidence 899999999887 777777666 4677888885 4 6789999999999999999988887776 6677
Q ss_pred eeEEEEecCCCEEEEEecCCcEEEEeec
Q 038802 317 LMSVAFSPDCMTRVIGTSNGTIFAGRRK 344 (532)
Q Consensus 317 v~~~~~s~~~~~l~~g~~dg~i~iw~~~ 344 (532)
|.+++| |+ +++|+.||.|++|++.
T Consensus 342 v~~~~~-~~---l~~~~~dg~i~~w~~~ 365 (615)
T 1pgu_A 342 ITALTV-NP---LISGSYDGRIMEWSSS 365 (615)
T ss_dssp EEEEET-TT---TEEEETTSCEEETTTT
T ss_pred EEEEEe-cC---cEEECCCCeEEEEEch
Confidence 888877 66 6666666666666643
No 79
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.1e-35 Score=315.22 Aligned_cols=263 Identities=20% Similarity=0.315 Sum_probs=228.1
Q ss_pred CCCCCCCCcccccccCC--------CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEE
Q 038802 28 RNLSQTPESKYWSSFKP--------HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCS 99 (532)
Q Consensus 28 ~~~~~~~~~~~w~~~~~--------~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~ 99 (532)
.+.+.++.+++|+.-.. ..+.+|...|++++|+|++++|++|+.|+.|++||+.++.....+.+|...|.++
T Consensus 399 ~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~ 478 (694)
T 3dm0_A 399 VSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSV 478 (694)
T ss_dssp EEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred EEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEE
Confidence 34578899999986432 3467999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCEEEEEcCCCCEEEEECCCCceEEEe---cCCCCCEEEEEeecCCC--cEEEEEeCCCeEEEEECCCCeEEEec
Q 038802 100 SFRPDGSLLAASDLSGLIQVFDVKSRTPLRRL---KSHTRPVRFVKYPFLDK--LHLVSGGDDGIVKFWDVAGESVVLDL 174 (532)
Q Consensus 100 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~---~~h~~~i~~~~~~~~~~--~~l~s~s~dg~i~iwd~~~~~~~~~~ 174 (532)
+|+|++++|++|+.|++|++||.......... .+|...|.+++|+| ++ ..+++|+.|++|++||+++++....+
T Consensus 479 ~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~ 557 (694)
T 3dm0_A 479 AFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSP-NTLQPTIVSASWDKTVKVWNLSNCKLRSTL 557 (694)
T ss_dssp EECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECS-CSSSCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeC-CCCcceEEEEeCCCeEEEEECCCCcEEEEE
Confidence 99999999999999999999998755433332 46899999999999 54 58999999999999999999999999
Q ss_pred cCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCC
Q 038802 175 FGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGG 254 (532)
Q Consensus 175 ~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~ 254 (532)
.+|...|++++|+| ++++|++|+.||+|++||+++++ ......+...|.+++|+|++.++++++++.|++||+.++
T Consensus 558 ~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~- 633 (694)
T 3dm0_A 558 AGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGK--KLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESK- 633 (694)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTE--EEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTT-
T ss_pred cCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCc--eEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCC-
Confidence 99999999999999 99999999999999999998854 344456677899999999999999988999999999887
Q ss_pred eeeEEccCCC-------------------cceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 255 KMVYSMESHN-------------------KTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 255 ~~~~~~~~~~-------------------~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
..+..+..+. ..+++++|+|+ +.+|++|+.||.|++||+..
T Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spd---------g~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 634 SIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSAD---------GSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp EEEEEECCCCC----------------CCCCEEEEEECTT---------SSEEEEEETTSEEEEEEC--
T ss_pred CChhhhccccccccccccccccccCCceeEEeeeEEEcCC---------CCEEEEEcCCCeEEEEeccC
Confidence 6555554321 13789999999 68999999999999999863
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-35 Score=290.64 Aligned_cols=256 Identities=18% Similarity=0.240 Sum_probs=220.4
Q ss_pred eEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECC--CCceEEEecCCCCCEEEEEeecCC--CcEEEEEeCCCe
Q 038802 84 EKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVK--SRTPLRRLKSHTRPVRFVKYPFLD--KLHLVSGGDDGI 159 (532)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~~~h~~~i~~~~~~~~~--~~~l~s~s~dg~ 159 (532)
+....+.+|.+.|++++|+|++++|++|+.||.|++||+. +++.+..+.+|...|++++|++ + +.+|++|+.||.
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGK 80 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSC
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCC-CCCCCEEEEeccCCE
Confidence 4566788999999999999999999999999999999997 5677788999999999999987 5 899999999999
Q ss_pred EEEEECCCCe--EEEeccCCCCceEEEEEeCCC--CCEEEEEeCCCeEEEEEcccCCceeE-EEecCCCcEEEEEEec--
Q 038802 160 VKFWDVAGES--VVLDLFGHKDYVRCGDCSPVN--GDMFVTGSYDHTVKLWDVRVENSKSV-MEVNHGKPIEDVMFLP-- 232 (532)
Q Consensus 160 i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~-~~~~~~~~v~~i~~~~-- 232 (532)
|++||+.+++ .+..+..|...|.+++|+| + +.++++++.||.|++||+++...... ....|...|.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 9999999987 7777888999999999999 7 89999999999999999988644333 3347899999999999
Q ss_pred -----------CCCEEEEEc-CCeEEEEEccCCC---eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeE
Q 038802 233 -----------SGGLIATAG-GNSVKIWDLIGGG---KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYM 297 (532)
Q Consensus 233 -----------~~~~l~~~~-d~~i~iwd~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i 297 (532)
++.++++++ |+.|++||+++.. .+...+.+|...|.+++|+|++.. +.++++++.||.|
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~------~~~l~s~~~dg~i 233 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL------RSYLASVSQDRTC 233 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS------SEEEEEEETTSCE
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCC------CCeEEEEeCCCEE
Confidence 689999988 9999999998653 355678889999999999998310 3689999999999
Q ss_pred EEEECCCce---EEEee---ecCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcc
Q 038802 298 KVFDYGKMK---VTHSM---RFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKE 347 (532)
Q Consensus 298 ~iwd~~~~~---~~~~~---~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~ 347 (532)
++||+.++. ..... .+...|++++|+|+|++|++++.||.|++|++....
T Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 234 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp EEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred EEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 999998863 22222 277899999999999999999999999999998653
No 81
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.4e-35 Score=289.22 Aligned_cols=266 Identities=18% Similarity=0.317 Sum_probs=227.5
Q ss_pred CCCCcccccccCCCcc----CccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCE
Q 038802 32 QTPESKYWSSFKPHQI----PGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSL 107 (532)
Q Consensus 32 ~~~~~~~w~~~~~~~~----~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 107 (532)
.++.+++|+....... ..|.+.|++++|+|+++++++|+.||.|++||+.+++....+.+|...|.+++| ++++
T Consensus 111 ~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~ 188 (401)
T 4aez_A 111 LERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHV 188 (401)
T ss_dssp ETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTE
T ss_pred CCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCE
Confidence 4567888886544322 348899999999999999999999999999999999999999999999999999 5679
Q ss_pred EEEEcCCCCEEEEECC-CCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEE
Q 038802 108 LAASDLSGLIQVFDVK-SRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDC 186 (532)
Q Consensus 108 l~~g~~dg~i~iwd~~-~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~ 186 (532)
+++|+.||.|++||+. .+..+..+.+|.+.|.+++|+| ++.+|++|+.||.|++||+++++.+..+..|...|.+++|
T Consensus 189 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~ 267 (401)
T 4aez_A 189 LSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAW 267 (401)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEE
T ss_pred EEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEE
Confidence 9999999999999998 5677888899999999999999 9999999999999999999999999999999999999999
Q ss_pred eCCCCCEEEEEe--CCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEE--Ec-CCeEEEEEccCCC-eeeEEc
Q 038802 187 SPVNGDMFVTGS--YDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIAT--AG-GNSVKIWDLIGGG-KMVYSM 260 (532)
Q Consensus 187 ~~~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~--~~-d~~i~iwd~~~~~-~~~~~~ 260 (532)
+|....++++|+ .|+.|++||++++..... ..+...|.+++|+|++.++++ ++ ||.|++||+.++. .....+
T Consensus 268 ~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~ 345 (401)
T 4aez_A 268 CPWQSNLLATGGGTMDKQIHFWNAATGARVNT--VDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDI 345 (401)
T ss_dssp CTTSTTEEEEECCTTTCEEEEEETTTCCEEEE--EECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEE
T ss_pred CCCCCCEEEEecCCCCCEEEEEECCCCCEEEE--EeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEe
Confidence 995556777765 799999999998654444 457789999999999999988 43 8999999998752 233446
Q ss_pred cCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEee
Q 038802 261 ESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSM 311 (532)
Q Consensus 261 ~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 311 (532)
.+|...|.+++|+|+ +.+|++++.||.|++||+.+++.+...
T Consensus 346 ~~h~~~v~~~~~s~d---------g~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 346 PAHDTRVLYSALSPD---------GRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp ECCSSCCCEEEECTT---------SSEEEEECTTSEEEEEECCC-------
T ss_pred cCCCCCEEEEEECCC---------CCEEEEEeCCCcEEEEECCCCcccccc
Confidence 789999999999999 679999999999999999998876554
No 82
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-35 Score=288.45 Aligned_cols=251 Identities=16% Similarity=0.208 Sum_probs=219.3
Q ss_pred CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCC--CceEEEEeeccCceeEEEEEccC--CCEEEEEcCCCCEEEE
Q 038802 45 HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQ--TLEKHSAISSFKDVVTCSSFRPD--GSLLAASDLSGLIQVF 120 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~dg~i~iw 120 (532)
..+.+|.++|++++|+|++++|++|+.||.|++||+. +++....+.+|...|++++|+++ +++|++|+.||.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 4567999999999999999999999999999999997 66777888999999999999987 9999999999999999
Q ss_pred ECCCCc--eEEEecCCCCCEEEEEeecCC--CcEEEEEeCCCeEEEEECCCC--eEEEeccCCCCceEEEEEeCC-----
Q 038802 121 DVKSRT--PLRRLKSHTRPVRFVKYPFLD--KLHLVSGGDDGIVKFWDVAGE--SVVLDLFGHKDYVRCGDCSPV----- 189 (532)
Q Consensus 121 d~~~~~--~~~~~~~h~~~i~~~~~~~~~--~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~~~~~v~~i~~~~~----- 189 (532)
|+.+++ .+..+..|...|.+++|+| + +.++++++.||.|++||+.++ .....+..|...|.+++|+|.
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccc
Confidence 999887 7778888999999999999 7 889999999999999999887 344566789999999999995
Q ss_pred -------CCCEEEEEeCCCeEEEEEcccCCceeE---EEecCCCcEEEEEEecC---CCEEEEEc-CCeEEEEEccCCC-
Q 038802 190 -------NGDMFVTGSYDHTVKLWDVRVENSKSV---MEVNHGKPIEDVMFLPS---GGLIATAG-GNSVKIWDLIGGG- 254 (532)
Q Consensus 190 -------~~~~l~s~s~dg~i~iwd~~~~~~~~~---~~~~~~~~v~~i~~~~~---~~~l~~~~-d~~i~iwd~~~~~- 254 (532)
++.++++|+.||.|++||+++...... ....|...|.+++|+|+ +.++++++ ||.|++||+.++.
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~ 243 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 243 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCc
Confidence 589999999999999999987654322 22368899999999999 89999998 9999999998753
Q ss_pred ---eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc
Q 038802 255 ---KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM 305 (532)
Q Consensus 255 ---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 305 (532)
........|...|++++|+|+ +.+|++++.||.|++||+...
T Consensus 244 ~~~~~~~~~~~~~~~v~~~~~s~~---------g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 244 PWKKTLLKEEKFPDVLWRASWSLS---------GNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp CCEEEESSSSCCSSCEEEEEECSS---------SCCEEEEESSSSEEEEEEEET
T ss_pred cceeeeeccccCCCcEEEEEEcCC---------CCEEEEecCCCcEEEEeCCCC
Confidence 222333448889999999999 678999999999999998753
No 83
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.6e-35 Score=316.64 Aligned_cols=264 Identities=16% Similarity=0.259 Sum_probs=231.3
Q ss_pred CCCCCcccccccCC---CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCE
Q 038802 31 SQTPESKYWSSFKP---HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSL 107 (532)
Q Consensus 31 ~~~~~~~~w~~~~~---~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 107 (532)
..++.+++|+.-.. ..+.+|.++|++++|+|++++|++++.||.|++||+.+++....+.+|.+.|++++|+|++++
T Consensus 32 ~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 111 (814)
T 3mkq_A 32 LYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY 111 (814)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred eCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCE
Confidence 45788999996554 345789999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCEEEEECCCC-ceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCC-CceEEEE
Q 038802 108 LAASDLSGLIQVFDVKSR-TPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHK-DYVRCGD 185 (532)
Q Consensus 108 l~~g~~dg~i~iwd~~~~-~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~v~~i~ 185 (532)
|++|+.||.|++||+.++ .....+.+|...|.+++|+|.++..+++++.||.|++||+.++.....+..+. ..+.+++
T Consensus 112 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~ 191 (814)
T 3mkq_A 112 VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVD 191 (814)
T ss_dssp EEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEE
T ss_pred EEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEE
Confidence 999999999999999886 67788889999999999998667899999999999999998887766665544 8899999
Q ss_pred EeCC-CCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCC
Q 038802 186 CSPV-NGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESH 263 (532)
Q Consensus 186 ~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~ 263 (532)
|+|. ++.++++|+.||.|++||++++.....+. .|...|.+++|+|++.++++++ ||.|++||+.++ .....+..|
T Consensus 192 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~~~ 269 (814)
T 3mkq_A 192 YYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE-GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY-KVEKTLNVG 269 (814)
T ss_dssp ECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-SEEEEECCS
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-cEEEEeecC
Confidence 9973 67899999999999999998865544443 6889999999999999999998 899999999887 788888899
Q ss_pred CcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 264 NKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 264 ~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
...+.+++|+|++ ...+++++.++.+.+|++..
T Consensus 270 ~~~v~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 270 LERSWCIATHPTG--------RKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp SSSEEEEEECTTC--------GGGEEEEEETTEEEEEECSC
T ss_pred CCcEEEEEEccCC--------CceEEEEEeCCCEEEEEcCC
Confidence 9999999999995 34445666677788888654
No 84
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-35 Score=292.26 Aligned_cols=282 Identities=15% Similarity=0.151 Sum_probs=234.9
Q ss_pred ccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCce---EEEEeec------------------------------------
Q 038802 51 VSSINSIVFSPTTSHLFAATHSASLTLFSSQTLE---KHSAISS------------------------------------ 91 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~---~~~~~~~------------------------------------ 91 (532)
..++++++|+|+|++++ ++.++.|++||+.+++ .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~-~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVF-AIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEE-EEETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEE-EEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 35889999999999555 4568999999998888 5555443
Q ss_pred ------------------cCceeEEEEEccCCCEE-EEEcCCCCEEEEECC--CCceEEEec--CCCCCEEEEEeecCCC
Q 038802 92 ------------------FKDVVTCSSFRPDGSLL-AASDLSGLIQVFDVK--SRTPLRRLK--SHTRPVRFVKYPFLDK 148 (532)
Q Consensus 92 ------------------~~~~v~~~~~~~~~~~l-~~g~~dg~i~iwd~~--~~~~~~~~~--~h~~~i~~~~~~~~~~ 148 (532)
|.+.|++++|+|++++| ++|+.||.|++||+. +++.+..+. .|...|.+++|+| ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~ 161 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-DD 161 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-TS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-CC
Confidence 23369999999999996 899999999999999 888888876 5778999999999 99
Q ss_pred cEEEEEeCCCeEEEEECCCCeEEE----eccCCCCceEEEEEeCCC---CCEEEEEeCCCeEEEEEcccCCceeEEEecC
Q 038802 149 LHLVSGGDDGIVKFWDVAGESVVL----DLFGHKDYVRCGDCSPVN---GDMFVTGSYDHTVKLWDVRVENSKSVMEVNH 221 (532)
Q Consensus 149 ~~l~s~s~dg~i~iwd~~~~~~~~----~~~~~~~~v~~i~~~~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 221 (532)
.+|++|+.||.|++|++.++.... .+.+|...|++++|+| + +.+|++|+.|++|++||++++.....+..+|
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h 240 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGH 240 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCC
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCC
Confidence 999999999999999998876543 6778999999999999 7 8899999999999999999877666655689
Q ss_pred CCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEcc-------------------------CCCcceEEEEEecc
Q 038802 222 GKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSME-------------------------SHNKTVTSVCVGRV 275 (532)
Q Consensus 222 ~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~-------------------------~~~~~i~~~~~~~~ 275 (532)
...|.+++|+ ++.+|++++ |+.|++||+.++ +++..+. .....|.+++|+|+
T Consensus 241 ~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~ 318 (450)
T 2vdu_B 241 KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTG-KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKN 318 (450)
T ss_dssp SSCEEEEEEC-STTEEEEEESSSEEEEEETTTC-CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSS
T ss_pred CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCC-cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCC
Confidence 9999999999 999999999 999999999887 5555554 22457899999998
Q ss_pred CCCCCccccccEEEEEe-cCCeEEEEEC--CCc---eEEEeeecCCCeeEEEEecCCCEEEEEec------CCcEEEEee
Q 038802 276 GNESGEEAMQYRILSVA-LDGYMKVFDY--GKM---KVTHSMRFPAPLMSVAFSPDCMTRVIGTS------NGTIFAGRR 343 (532)
Q Consensus 276 ~~~~~~~~~~~~l~s~~-~dg~i~iwd~--~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~g~~------dg~i~iw~~ 343 (532)
+.++++++ .|+.|++|++ .++ +.+..+.....|.+++|+|++.++++++. +..|.+|.+
T Consensus 319 ---------~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~ 389 (450)
T 2vdu_B 319 ---------LPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEY 389 (450)
T ss_dssp ---------SSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEE
T ss_pred ---------CCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEE
Confidence 57788888 8999999999 555 77777776689999999996544444332 456899988
Q ss_pred cCc
Q 038802 344 KKK 346 (532)
Q Consensus 344 ~~~ 346 (532)
...
T Consensus 390 ~~~ 392 (450)
T 2vdu_B 390 NLN 392 (450)
T ss_dssp ETT
T ss_pred EcC
Confidence 754
No 85
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.8e-34 Score=277.22 Aligned_cols=257 Identities=21% Similarity=0.292 Sum_probs=226.4
Q ss_pred CCCceEEEEeeccCceeEEEEEccC-CCEEEEEcCCCCEEEEECCCCc-----eEEEecCCCCCEEEEEeecCCCcEEEE
Q 038802 80 SQTLEKHSAISSFKDVVTCSSFRPD-GSLLAASDLSGLIQVFDVKSRT-----PLRRLKSHTRPVRFVKYPFLDKLHLVS 153 (532)
Q Consensus 80 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~~~-----~~~~~~~h~~~i~~~~~~~~~~~~l~s 153 (532)
.++.....++.+|.+.|++++|+|+ +++|++|+.||+|+|||+.+.+ +...+.+|...|.+++|+| ++.+|++
T Consensus 25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~-dg~~l~s 103 (340)
T 4aow_A 25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS-DGQFALS 103 (340)
T ss_dssp -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT-TSSEEEE
T ss_pred CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC-CCCEEEE
Confidence 3445666789999999999999997 6899999999999999987643 5677889999999999999 9999999
Q ss_pred EeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecC
Q 038802 154 GGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPS 233 (532)
Q Consensus 154 ~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~ 233 (532)
|+.|+.|++|+............+...+....+++ ++.++++|+.|+.+++||+............|...+..++|+++
T Consensus 104 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 104 GSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred EcccccceEEeecccceeeeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 99999999999999999888888999999999998 89999999999999999988654444444578899999999986
Q ss_pred C--CEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEe
Q 038802 234 G--GLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHS 310 (532)
Q Consensus 234 ~--~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 310 (532)
+ .++++++ |+.|++||+.+. +....+.+|...|++++|+|+ +.+|++|+.||.|++||+.+.+.+..
T Consensus 183 ~~~~~~~s~~~d~~i~i~d~~~~-~~~~~~~~h~~~v~~~~~s~~---------~~~l~s~s~Dg~i~iwd~~~~~~~~~ 252 (340)
T 4aow_A 183 SSNPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPD---------GSLCASGGKDGQAMLWDLNEGKHLYT 252 (340)
T ss_dssp SSSCEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTT---------SSEEEEEETTCEEEEEETTTTEEEEE
T ss_pred CCCcEEEEEcCCCEEEEEECCCC-ceeeEecCCCCcEEEEEECCC---------CCEEEEEeCCCeEEEEEeccCceeee
Confidence 5 4677777 899999999887 888899999999999999998 67999999999999999999999999
Q ss_pred eecCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 311 MRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 311 ~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+.+...|.+++|+|++.+ ++++.||.|++|++.+....
T Consensus 253 ~~~~~~v~~~~~~~~~~~-~~~~~d~~i~iwd~~~~~~~ 290 (340)
T 4aow_A 253 LDGGDIINALCFSPNRYW-LCAATGPSIKIWDLEGKIIV 290 (340)
T ss_dssp EECSSCEEEEEECSSSSE-EEEEETTEEEEEETTTTEEE
T ss_pred ecCCceEEeeecCCCCce-eeccCCCEEEEEECCCCeEE
Confidence 999899999999998765 55667999999999876543
No 86
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-34 Score=277.01 Aligned_cols=254 Identities=15% Similarity=0.209 Sum_probs=230.0
Q ss_pred eEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEE
Q 038802 84 EKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFW 163 (532)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iw 163 (532)
.....+.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.||.|++|
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLW 101 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEE
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEE
Confidence 34556789999999999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred ECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCC-----CeEEEEEcccCCceeEE----------EecCCC--cEE
Q 038802 164 DVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYD-----HTVKLWDVRVENSKSVM----------EVNHGK--PIE 226 (532)
Q Consensus 164 d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~----------~~~~~~--~v~ 226 (532)
|+.+++.+..+. +...|.+++|+| ++.++++++.+ |.|++||+......... ...+.. .+.
T Consensus 102 d~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 102 DVSNGQCVATWK-SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp ETTTCCEEEEEE-CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred ECCCCcEEEEee-cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 999999988887 889999999999 99999999999 99999999876432211 123444 899
Q ss_pred EEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc
Q 038802 227 DVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM 305 (532)
Q Consensus 227 ~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 305 (532)
+++|+|+++++++++ ||.|++||+.+....+..+..|...|.+++|+|+ +.+|++++.||.|++||+.++
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPD---------LTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTT---------SSEEEEEETTSEEEEEETTTC
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCC---------CCEEEEecCCceEEEEECCCC
Confidence 999999999999988 8999999999855888999999999999999998 678999999999999999999
Q ss_pred eEEEeeecCCCeeEEEEecCCCEEEEEecCC--------------cEEEEeecCcccc
Q 038802 306 KVTHSMRFPAPLMSVAFSPDCMTRVIGTSNG--------------TIFAGRRKKKENV 349 (532)
Q Consensus 306 ~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg--------------~i~iw~~~~~~~~ 349 (532)
+.+..+.+..++.+++|+|+++++++++.++ .+++|+..+.+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 308 (369)
T 3zwl_B 251 QVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI 308 (369)
T ss_dssp CEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEE
T ss_pred ceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch
Confidence 9999999999999999999999999999998 7888988776544
No 87
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.8e-35 Score=288.71 Aligned_cols=264 Identities=11% Similarity=0.135 Sum_probs=212.5
Q ss_pred CCCCCCcccccccCC-----CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCce---EEEEeeccCceeEEEEE
Q 038802 30 LSQTPESKYWSSFKP-----HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLE---KHSAISSFKDVVTCSSF 101 (532)
Q Consensus 30 ~~~~~~~~~w~~~~~-----~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~---~~~~~~~~~~~v~~~~~ 101 (532)
.+.++.+++|+.... ..+.+|.+.|++++|+|++++|++++.|+.|++||+.++. ....+..|...|++++|
T Consensus 29 ~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 108 (377)
T 3dwl_C 29 TTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRW 108 (377)
T ss_dssp CCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEEC
T ss_pred ecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEE
Confidence 457889999997543 4568999999999999999999999999999999999876 67778889999999999
Q ss_pred ccCCCEEEEEcCCCCEEEEECCCCc---eEEEecC-CCCCEEEEEeecCCCcEEEEEeCCCeEEEEECC-----------
Q 038802 102 RPDGSLLAASDLSGLIQVFDVKSRT---PLRRLKS-HTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVA----------- 166 (532)
Q Consensus 102 ~~~~~~l~~g~~dg~i~iwd~~~~~---~~~~~~~-h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~----------- 166 (532)
+|++++|++|+.||.|++||+.+++ ....+.. |...|.+++|+| ++.+|++|+.|+.|++||+.
T Consensus 109 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 187 (377)
T 3dwl_C 109 SPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDVDAKPEAS 187 (377)
T ss_dssp CTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT-TSSEEEEEESSSCEEEEEECCSSCC-CCCSC
T ss_pred CCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC-CCCEEEEEeCCCEEEEEEEEecccCCCcccc
Confidence 9999999999999999999998876 4677777 999999999999 89999999999999999985
Q ss_pred -------CCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCc----eeEEEecCCCcEEEEEEecCCC
Q 038802 167 -------GESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENS----KSVMEVNHGKPIEDVMFLPSGG 235 (532)
Q Consensus 167 -------~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~i~~~~~~~ 235 (532)
.++++..+ +|...|.+++|+| ++++|++++.||+|++||++++.. ...+. .|..+|.+++|+|+++
T Consensus 188 ~~~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~ 264 (377)
T 3dwl_C 188 VWGSRLPFNTVCAEY-PSGGWVHAVGFSP-SGNALAYAGHDSSVTIAYPSAPEQPPRALITVK-LSQLPLRSLLWANESA 264 (377)
T ss_dssp SSCSCCCEEEEEECC-CCSSSEEEEEECT-TSSCEEEEETTTEEC-CEECSTTSCEEECCCEE-CSSSCEEEEEEEETTE
T ss_pred ccccccchhhhhhcc-cCCceEEEEEECC-CCCEEEEEeCCCcEEEEECCCCCCcceeeEeec-CCCCceEEEEEcCCCC
Confidence 35567777 8999999999999 999999999999999999998766 33333 7889999999999999
Q ss_pred EEEEEcCCeEEEEEccCCC-ee----------------------------e------E----------------EccCCC
Q 038802 236 LIATAGGNSVKIWDLIGGG-KM----------------------------V------Y----------------SMESHN 264 (532)
Q Consensus 236 ~l~~~~d~~i~iwd~~~~~-~~----------------------------~------~----------------~~~~~~ 264 (532)
+|++++++.+.+|+....+ .. . . ....|.
T Consensus 265 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~ 344 (377)
T 3dwl_C 265 IVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQ 344 (377)
T ss_dssp EEEEESSSSEEEECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCS
T ss_pred EEEEEcCCcEEEEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCcccc
Confidence 9999997666688765221 00 0 0 011389
Q ss_pred cceEEEEEeccCCCCCccccccEEEEEecCCeEEEEEC
Q 038802 265 KTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDY 302 (532)
Q Consensus 265 ~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 302 (532)
..|+++.+.+.... ....++|+|.||.|++||+
T Consensus 345 ~~i~~~~~~~~~~~-----~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 345 NMIATLRPYAGTPG-----NITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp SCEEEEEEEEEETT-----EEEEEEEEETTSEEEEECC
T ss_pred ceeEEEeccCCCCC-----ceEEEEeecCCCcEEEecC
Confidence 99999998765310 0126999999999999985
No 88
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.6e-34 Score=288.35 Aligned_cols=251 Identities=19% Similarity=0.251 Sum_probs=216.5
Q ss_pred EEeeccCceeEEEEEccC-CCEEEEEcCCCCEEEEECCC----------CceEEEecCCCCCEEEEEeecCCCc-EEEEE
Q 038802 87 SAISSFKDVVTCSSFRPD-GSLLAASDLSGLIQVFDVKS----------RTPLRRLKSHTRPVRFVKYPFLDKL-HLVSG 154 (532)
Q Consensus 87 ~~~~~~~~~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~----------~~~~~~~~~h~~~i~~~~~~~~~~~-~l~s~ 154 (532)
.....|.+.|++++|+|+ +.+|++|+.+|.|++||+.+ ...+..+.+|...|.+++|+| ++. +|++|
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~ 200 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNP-NLNGYLLSA 200 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECT-TSTTEEEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCC-CCCCeEEEE
Confidence 445678999999999997 78999999999999999976 577888899999999999999 555 99999
Q ss_pred eCCCeEEEEECCCCeE-------EEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCC--ceeEEEecCCCcE
Q 038802 155 GDDGIVKFWDVAGESV-------VLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVEN--SKSVMEVNHGKPI 225 (532)
Q Consensus 155 s~dg~i~iwd~~~~~~-------~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~~~~~~v 225 (532)
+.||.|++||+.++.. ...+.+|...|.+++|+|.++.+|++++.||.|++||+++.. ........|...|
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999999987321 345678999999999999778899999999999999999763 2222223789999
Q ss_pred EEEEEecCCC-EEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECC
Q 038802 226 EDVMFLPSGG-LIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYG 303 (532)
Q Consensus 226 ~~i~~~~~~~-~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 303 (532)
.+++|+|++. ++++++ ||.|++||+++...++..+..|...|.+++|+|++ ..++++++.||.|++||+.
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~--------~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN--------ETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSC--------TTEEEEEETTSCCEEEEGG
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCC--------CCEEEEEeCCCcEEEEeCC
Confidence 9999999887 677777 89999999998667888898999999999999985 4689999999999999998
Q ss_pred C--------------ceEEEeee-cCCCeeEEEEecCCC-EEEEEecCCcEEEEeecCc
Q 038802 304 K--------------MKVTHSMR-FPAPLMSVAFSPDCM-TRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 304 ~--------------~~~~~~~~-~~~~v~~~~~s~~~~-~l~~g~~dg~i~iw~~~~~ 346 (532)
. .+++..+. |...|++++|+|++. ++++++.||.|++|++...
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 353 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp GTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 7 24555554 677899999999999 8999999999999999765
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.5e-35 Score=290.13 Aligned_cols=273 Identities=15% Similarity=0.201 Sum_probs=232.0
Q ss_pred CCCCCCCcccccccCCC---------ccCccccCeeEEEEcCC----C---CeEEEEEeCCeEEEEeCCCceE-----EE
Q 038802 29 NLSQTPESKYWSSFKPH---------QIPGLVSSINSIVFSPT----T---SHLFAATHSASLTLFSSQTLEK-----HS 87 (532)
Q Consensus 29 ~~~~~~~~~~w~~~~~~---------~~~~h~~~V~~i~~sp~----~---~~l~~~~~d~~v~i~~~~~~~~-----~~ 87 (532)
..+.++.+++|+..... .+.+|..+|++++|+|+ + .+|++++.||.|++||+.+++. ..
T Consensus 31 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~ 110 (397)
T 1sq9_A 31 SCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFE 110 (397)
T ss_dssp EEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEE
T ss_pred EEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccce
Confidence 34678899999876543 35789999999999999 9 9999999999999999988776 78
Q ss_pred Eeecc-----CceeEEEEEc----cCCCE-EEEEcCCCCEEEEECCC------CceEE-----Ee-------cCCCCCEE
Q 038802 88 AISSF-----KDVVTCSSFR----PDGSL-LAASDLSGLIQVFDVKS------RTPLR-----RL-------KSHTRPVR 139 (532)
Q Consensus 88 ~~~~~-----~~~v~~~~~~----~~~~~-l~~g~~dg~i~iwd~~~------~~~~~-----~~-------~~h~~~i~ 139 (532)
.+..| ...|.+++|+ |++++ |++|+.||.|++||+.+ ++.+. .+ ..|...|.
T Consensus 111 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 190 (397)
T 1sq9_A 111 KLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFAT 190 (397)
T ss_dssp EECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCC
T ss_pred eecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCce
Confidence 88888 5899999999 99999 99999999999999988 66555 66 45899999
Q ss_pred EEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccC---C---CCceEEEEEeCCCCCEEEEEeCC---CeEEEEEccc
Q 038802 140 FVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFG---H---KDYVRCGDCSPVNGDMFVTGSYD---HTVKLWDVRV 210 (532)
Q Consensus 140 ~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~---~~~v~~i~~~~~~~~~l~s~s~d---g~i~iwd~~~ 210 (532)
+++|+| ++ .+++++.||.|++||+++++.+..+.. | ...|.+++|+| ++.+|++++.| |.|++||+++
T Consensus 191 ~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~ 267 (397)
T 1sq9_A 191 SVDISE-RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEF 267 (397)
T ss_dssp EEEECT-TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTT
T ss_pred EEEECC-Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC-CCCEEEEEecCCCCceEEEEECCC
Confidence 999999 77 999999999999999999999999988 9 99999999999 89999999999 9999999998
Q ss_pred CCceeEEEec-------------CCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEcc------CC-------
Q 038802 211 ENSKSVMEVN-------------HGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSME------SH------- 263 (532)
Q Consensus 211 ~~~~~~~~~~-------------~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~------~~------- 263 (532)
++....+. . |...|.+++|+|++.+|++++ |+.|++||+.++ +.+..+. .|
T Consensus 268 ~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~g 345 (397)
T 1sq9_A 268 GERIGSLS-VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK-ERITTLNMHCDDIEIEEDILAV 345 (397)
T ss_dssp CCEEEEEC-BC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCGGGCSSGGGCCCB
T ss_pred Ccccceec-cCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC-ceeEEEecccCcccchhhhhcc
Confidence 76555554 4 889999999999999999998 899999999887 7888888 77
Q ss_pred --------CcceEEEEEeccCCCCCc-cccccEEEEEecCCeEEEEECCCce
Q 038802 264 --------NKTVTSVCVGRVGNESGE-EAMQYRILSVALDGYMKVFDYGKMK 306 (532)
Q Consensus 264 --------~~~i~~~~~~~~~~~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~ 306 (532)
...|++++|+|++..... ...+.+|++++.||.|++||+.+++
T Consensus 346 ~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 346 DEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 999999999998410000 0001699999999999999987753
No 90
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.6e-34 Score=280.05 Aligned_cols=245 Identities=18% Similarity=0.257 Sum_probs=219.5
Q ss_pred eeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCc--eEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECC
Q 038802 89 ISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRT--PLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVA 166 (532)
Q Consensus 89 ~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~ 166 (532)
+..|.++|++++|+|++++|++|+.||.|++||+.+++ .+..+.+|...|.+++|+| ++.++++++.||.|++||+.
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEEECC
Confidence 44588999999999999999999999999999999887 8888999999999999999 99999999999999999998
Q ss_pred CCeEEEe--ccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCc---eeEEEecCCCcEEEEEEecCCCEEEEEc
Q 038802 167 GESVVLD--LFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENS---KSVMEVNHGKPIEDVMFLPSGGLIATAG 241 (532)
Q Consensus 167 ~~~~~~~--~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~---~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 241 (532)
+++.... +..|...|.+++|+| ++++|++++.||.|++||++.... .......|...|.+++|+|++.++++++
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCeeeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 8875443 467999999999999 899999999999999999998664 2233346789999999999999999998
Q ss_pred -CCeEEEEEcc-----------------CCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECC
Q 038802 242 -GNSVKIWDLI-----------------GGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYG 303 (532)
Q Consensus 242 -d~~i~iwd~~-----------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 303 (532)
|+.|++||+. ....++..+..|...|.+++|+|+ +.++++++.||.|++||+.
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~l~~~~~d~~i~i~d~~ 232 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN---------GSRVAWVSHDSTVCLADAD 232 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSS---------SSEEEEEETTTEEEEEEGG
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCC---------CCEEEEEeCCCEEEEEECC
Confidence 9999999964 123778888899999999999998 6799999999999999999
Q ss_pred CceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEeecC
Q 038802 304 KMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKK 345 (532)
Q Consensus 304 ~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~ 345 (532)
+++.+..+. +..+|.+++|+|++.++++| .||.|++|++.+
T Consensus 233 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 233 KKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp GTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 999988887 66799999999999988888 999999999988
No 91
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.7e-34 Score=283.61 Aligned_cols=264 Identities=20% Similarity=0.312 Sum_probs=226.9
Q ss_pred CCCCcccccccCCC-----ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCC
Q 038802 32 QTPESKYWSSFKPH-----QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGS 106 (532)
Q Consensus 32 ~~~~~~~w~~~~~~-----~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 106 (532)
.+..+++|+..... .+.+|.+.|++++|+|+|++|++|+.||.|++||+.+++.+..+.+|...+.++++ ++.
T Consensus 123 ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~ 200 (420)
T 4gga_A 123 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSY 200 (420)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETT
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCC
Confidence 35678999976543 23678899999999999999999999999999999999999999999999998877 567
Q ss_pred EEEEEcCCCCEEEEECCCC-ceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCe----EEEeccCCCCce
Q 038802 107 LLAASDLSGLIQVFDVKSR-TPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGES----VVLDLFGHKDYV 181 (532)
Q Consensus 107 ~l~~g~~dg~i~iwd~~~~-~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~----~~~~~~~~~~~v 181 (532)
+|++|+.|+.+++||.... ..+..+.+|...+..+.|+| ++.++++++.|+.+++|+..+++ .+.....|...|
T Consensus 201 ~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~-~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V 279 (420)
T 4gga_A 201 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAV 279 (420)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCE
T ss_pred EEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC-CCCeeeeeeccccceEEeeccccccceeeeeecccCCce
Confidence 9999999999999998764 55677889999999999999 99999999999999999998764 345667899999
Q ss_pred EEEEEeCCCCCEEEEE--eCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc---CCeEEEEEccCCCee
Q 038802 182 RCGDCSPVNGDMFVTG--SYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG---GNSVKIWDLIGGGKM 256 (532)
Q Consensus 182 ~~i~~~~~~~~~l~s~--s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~---d~~i~iwd~~~~~~~ 256 (532)
.+++|+|.++.+++++ +.|++|++||++++... ....+...+.++.|+|++..+++++ |+.|++||+.++ ++
T Consensus 280 ~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~--~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~-~~ 356 (420)
T 4gga_A 280 KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL--SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-AK 356 (420)
T ss_dssp EEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE--EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-CE
T ss_pred eeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc--eeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC-cE
Confidence 9999999677777764 57999999999985443 3445667899999999999887653 789999999887 88
Q ss_pred eEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEe
Q 038802 257 VYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHS 310 (532)
Q Consensus 257 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 310 (532)
+..+.+|.+.|++++|+|+ +.+|++|+.||+|+|||+.+..+...
T Consensus 357 v~~l~gH~~~V~~l~~spd---------g~~l~S~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 357 VAELKGHTSRVLSLTMSPD---------GATVASAAADETLRLWRCFELDPARR 401 (420)
T ss_dssp EEEECCCSSCEEEEEECTT---------SSCEEEEETTTEEEEECCSCSSCC--
T ss_pred EEEEcCCCCCEEEEEEcCC---------CCEEEEEecCCeEEEEECCCCCccch
Confidence 8999999999999999999 67899999999999999977554433
No 92
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.5e-35 Score=285.65 Aligned_cols=260 Identities=14% Similarity=0.220 Sum_probs=222.8
Q ss_pred CCCCcccccccCCCc---c-----CccccCeeEEEEcCC----CCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEE
Q 038802 32 QTPESKYWSSFKPHQ---I-----PGLVSSINSIVFSPT----TSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCS 99 (532)
Q Consensus 32 ~~~~~~~w~~~~~~~---~-----~~h~~~V~~i~~sp~----~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~ 99 (532)
.+..+++|+...... + ..|...|++++|+|+ +.++++|+.||.|++||+.+++....+.+|...|.++
T Consensus 42 ~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~ 121 (366)
T 3k26_A 42 GSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINEL 121 (366)
T ss_dssp ETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEE
T ss_pred CCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEE
Confidence 455789998654332 2 236688999999999 6689999999999999999999999999999999999
Q ss_pred EEcc-CCCEEEEEcCCCCEEEEECCCCceEEEe---cCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEecc
Q 038802 100 SFRP-DGSLLAASDLSGLIQVFDVKSRTPLRRL---KSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLF 175 (532)
Q Consensus 100 ~~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~---~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 175 (532)
+|+| ++.+|++|+.||.|++||+.+++.+..+ .+|...|.+++|+| ++.++++++.||.|++||+++++....+.
T Consensus 122 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 200 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIK 200 (366)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHH
T ss_pred EECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC-CCCEEEEecCCCCEEEEECCCCccccccc
Confidence 9999 9999999999999999999999998888 68999999999999 89999999999999999998775443333
Q ss_pred ----------------------------CCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCc------------e-
Q 038802 176 ----------------------------GHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENS------------K- 214 (532)
Q Consensus 176 ----------------------------~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~------------~- 214 (532)
.|...|.+++|+ ++++++++.||.|++||+++... .
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 277 (366)
T 3k26_A 201 ESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTI 277 (366)
T ss_dssp HHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEE
T ss_pred eeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchhe
Confidence 399999999998 57999999999999999987543 1
Q ss_pred eEEEecCCCcEEEEEEecC--CCEEEEEc-CCeEEEEEccCCC---eeeEEccCC--CcceEEEEEeccCCCCCcccccc
Q 038802 215 SVMEVNHGKPIEDVMFLPS--GGLIATAG-GNSVKIWDLIGGG---KMVYSMESH--NKTVTSVCVGRVGNESGEEAMQY 286 (532)
Q Consensus 215 ~~~~~~~~~~v~~i~~~~~--~~~l~~~~-d~~i~iwd~~~~~---~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~ 286 (532)
......|...|.+++|+|+ +.+|++++ ||.|++||+.++. .....+..| ...|++++|+|+ +.
T Consensus 278 ~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------~~ 348 (366)
T 3k26_A 278 LGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRD---------SS 348 (366)
T ss_dssp EEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTT---------SS
T ss_pred eccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCC---------CC
Confidence 1222367889999999999 99999999 8999999998763 244567777 789999999998 68
Q ss_pred EEEEEecCCeEEEEECCC
Q 038802 287 RILSVALDGYMKVFDYGK 304 (532)
Q Consensus 287 ~l~s~~~dg~i~iwd~~~ 304 (532)
+|++++.||.|++||+.+
T Consensus 349 ~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 349 ILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEEEEETTSEEEEEEC--
T ss_pred eEEEEeCCCEEEEEEecC
Confidence 999999999999999853
No 93
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-35 Score=295.16 Aligned_cols=275 Identities=12% Similarity=0.152 Sum_probs=227.3
Q ss_pred EEcCCCCeEEEEEeCCeEEEEeCCCceEEEEe-eccCceeEEEEEcc-CCCEEEEEcCCCCEEEEECCC---Cc---eEE
Q 038802 58 VFSPTTSHLFAATHSASLTLFSSQTLEKHSAI-SSFKDVVTCSSFRP-DGSLLAASDLSGLIQVFDVKS---RT---PLR 129 (532)
Q Consensus 58 ~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~g~~dg~i~iwd~~~---~~---~~~ 129 (532)
.|+|++..+++++ .|+ .+++.+..+ .+|.+.|++++|+| ++++|++|+.||+|++||+.+ +. ...
T Consensus 34 ~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~ 106 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSL 106 (437)
T ss_dssp GGCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSE
T ss_pred hcCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceee
Confidence 4788888777655 388 457788888 88999999999999 999999999999999999876 33 233
Q ss_pred EecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECC---CCeEEEecc----------C--CCCceEEEE--EeCCCCC
Q 038802 130 RLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVA---GESVVLDLF----------G--HKDYVRCGD--CSPVNGD 192 (532)
Q Consensus 130 ~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~---~~~~~~~~~----------~--~~~~v~~i~--~~~~~~~ 192 (532)
.+ .|.+.|.+++|+| ++.+|++|+.||.|++||+. +++...... . +...+.++. +++ ++.
T Consensus 107 ~~-~h~~~v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~ 183 (437)
T 3gre_A 107 TY-DCSSTVTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKS 183 (437)
T ss_dssp EE-ECSSCEEEEEECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCE
T ss_pred ec-cCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCC
Confidence 33 4999999999999 99999999999999999994 444333222 1 456666776 446 788
Q ss_pred EEEEEeCCCeEEEEEcccCCceeEEEec-CCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEcc-CCCcceEE
Q 038802 193 MFVTGSYDHTVKLWDVRVENSKSVMEVN-HGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSME-SHNKTVTS 269 (532)
Q Consensus 193 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~-~~~~~i~~ 269 (532)
++++|+.||.|++||+++++....+... |...|.+++|+|++.+|++++ ||.|++||++++ .++..+. .|...|.+
T Consensus 184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~ 262 (437)
T 3gre_A 184 LLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN-VLIRSWSFGDHAPITH 262 (437)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT-EEEEEEBCTTCEEEEE
T ss_pred EEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc-cEEEEEecCCCCceEE
Confidence 9999999999999999987766666532 789999999999999999998 899999999986 7777765 78889999
Q ss_pred EEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee---------------------------cCCCeeEEEE
Q 038802 270 VCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR---------------------------FPAPLMSVAF 322 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------------------------~~~~v~~~~~ 322 (532)
++++|... .++.++++++.||.|++||+.+++++..+. |...|++++|
T Consensus 263 ~~~~~~~s-----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~ 337 (437)
T 3gre_A 263 VEVCQFYG-----KNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISV 337 (437)
T ss_dssp EEECTTTC-----TTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEE
T ss_pred EEeccccC-----CCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEE
Confidence 98876421 126799999999999999999999887776 4456899999
Q ss_pred ecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 323 SPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 323 s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+ ++++|++|+.||.|++|++.+.+..
T Consensus 338 ~-~~~~l~s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 338 S-NDKILLTDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp E-TTEEEEEEGGGTEEEEEETTCGGGC
T ss_pred C-CceEEEecCCCCeEEEEECCCcccc
Confidence 9 7799999999999999999987654
No 94
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.3e-34 Score=278.63 Aligned_cols=264 Identities=14% Similarity=0.215 Sum_probs=223.9
Q ss_pred CCCcccccccCCCc----cCccccCeeEEEEcCC---CCeEEEEEeCCeEEEEeCCCce-EEEEeeccCceeEEEEE---
Q 038802 33 TPESKYWSSFKPHQ----IPGLVSSINSIVFSPT---TSHLFAATHSASLTLFSSQTLE-KHSAISSFKDVVTCSSF--- 101 (532)
Q Consensus 33 ~~~~~~w~~~~~~~----~~~h~~~V~~i~~sp~---~~~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~v~~~~~--- 101 (532)
++.+++|+...... ..+|.++|++++|+|+ +.++++|+.||.|++||+.+++ ....+.+|...|.+++|
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 122 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGG 122 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESG
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccc
Confidence 78899999765432 2479999999999999 6999999999999999999887 88889999999999955
Q ss_pred ---ccCCCEEEEEcCCCCEEEEECCCCc-eEEEecCCCC----CEEEEE----eecCCCcEEEEEeCCCeEEEEECCCCe
Q 038802 102 ---RPDGSLLAASDLSGLIQVFDVKSRT-PLRRLKSHTR----PVRFVK----YPFLDKLHLVSGGDDGIVKFWDVAGES 169 (532)
Q Consensus 102 ---~~~~~~l~~g~~dg~i~iwd~~~~~-~~~~~~~h~~----~i~~~~----~~~~~~~~l~s~s~dg~i~iwd~~~~~ 169 (532)
+|++++|++|+.||.|++||+.++. .+..+..|.+ .+.+++ |+| ++.++++++.||.|++||+++++
T Consensus 123 ~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~ 201 (357)
T 3i2n_A 123 LGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMA 201 (357)
T ss_dssp GGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTE
T ss_pred cccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCc
Confidence 6899999999999999999999886 6777776655 899998 677 89999999999999999999988
Q ss_pred EEEeccCCCCceEEEEEeCC--CCCEEEEEeCCCeEEEEEcccCCceeEEE----ecCCCcEEEEEEecCCC-EEEEEc-
Q 038802 170 VVLDLFGHKDYVRCGDCSPV--NGDMFVTGSYDHTVKLWDVRVENSKSVME----VNHGKPIEDVMFLPSGG-LIATAG- 241 (532)
Q Consensus 170 ~~~~~~~~~~~v~~i~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~----~~~~~~v~~i~~~~~~~-~l~~~~- 241 (532)
.... ..|...|.+++|+|. ++.++++|+.||.|++||+++........ ..|...|.+++|+|++. ++++++
T Consensus 202 ~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 280 (357)
T 3i2n_A 202 LRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGG 280 (357)
T ss_dssp EEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred eeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeC
Confidence 7544 568899999999985 67899999999999999998765444332 27899999999999998 788888
Q ss_pred CCeEEEEEccCCC------------------eeeEEccCCCcceEEEEEeccCCCCCccccccEEE-EEecCCeEEEEEC
Q 038802 242 GNSVKIWDLIGGG------------------KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRIL-SVALDGYMKVFDY 302 (532)
Q Consensus 242 d~~i~iwd~~~~~------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~-s~~~dg~i~iwd~ 302 (532)
||.|++||+.... ..+..+.+|...|++++|+|+ +.+++ +++.||.|++||+
T Consensus 281 dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 281 AGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPD---------KRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp TSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSS---------STTEEEEEETTSEEEEEEE
T ss_pred CCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCC---------CCeEEEEecCCCcEEEEEC
Confidence 8999999998542 356778899999999999999 45666 8999999999999
Q ss_pred CCceE
Q 038802 303 GKMKV 307 (532)
Q Consensus 303 ~~~~~ 307 (532)
.+.+.
T Consensus 352 ~~~~~ 356 (357)
T 3i2n_A 352 TKLNK 356 (357)
T ss_dssp CC---
T ss_pred CCccc
Confidence 87654
No 95
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.4e-34 Score=282.82 Aligned_cols=265 Identities=13% Similarity=0.181 Sum_probs=228.2
Q ss_pred CCCCCCcccccccC-------CCccCccccCeeEEEEcC-CCCeEEEEEeCCeEEEEeCCCc-------eEEEEeeccCc
Q 038802 30 LSQTPESKYWSSFK-------PHQIPGLVSSINSIVFSP-TTSHLFAATHSASLTLFSSQTL-------EKHSAISSFKD 94 (532)
Q Consensus 30 ~~~~~~~~~w~~~~-------~~~~~~h~~~V~~i~~sp-~~~~l~~~~~d~~v~i~~~~~~-------~~~~~~~~~~~ 94 (532)
...++.+.+|+.-. ...+.+|.++|++++|+| ++.+|++|+.||.|++||+.++ +....+.+|..
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~ 132 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTK 132 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSS
T ss_pred EcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCC
Confidence 45678899998533 234678999999999999 8999999999999999999887 56788899999
Q ss_pred eeEEEEEccCC-CEEEEEcCCCCEEEEECCCCceEEEe--cCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEE
Q 038802 95 VVTCSSFRPDG-SLLAASDLSGLIQVFDVKSRTPLRRL--KSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVV 171 (532)
Q Consensus 95 ~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~--~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~ 171 (532)
.|.+++|+|++ .+|++|+.||.|++||+.+++.+..+ .+|...|.+++|+| ++.+|++++.||.|++||+++++.+
T Consensus 133 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 133 RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTVV 211 (402)
T ss_dssp CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEE
T ss_pred eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCcee
Confidence 99999999998 69999999999999999999999999 88999999999999 9999999999999999999999999
Q ss_pred Eec-cCCCCc-eEEEEEeCCCCCEEEEE---eCCCeEEEEEcccCCc-eeEEEecCCCcEEEEEEecCCCEEE-EEc-CC
Q 038802 172 LDL-FGHKDY-VRCGDCSPVNGDMFVTG---SYDHTVKLWDVRVENS-KSVMEVNHGKPIEDVMFLPSGGLIA-TAG-GN 243 (532)
Q Consensus 172 ~~~-~~~~~~-v~~i~~~~~~~~~l~s~---s~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~l~-~~~-d~ 243 (532)
..+ .+|.+. +.++.|+| ++.++++| +.|+.|++||+++... .......+...+.+++|+|++.+++ +++ |+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg 290 (402)
T 2aq5_A 212 AEKDRPHEGTRPVHAVFVS-EGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS 290 (402)
T ss_dssp EEEECSSCSSSCCEEEECS-TTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS
T ss_pred eeeccCCCCCcceEEEEcC-CCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC
Confidence 888 788776 89999999 89999999 7999999999998654 3445557888999999999999886 454 89
Q ss_pred eEEEEEccCCCeeeEEccC--CCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceE
Q 038802 244 SVKIWDLIGGGKMVYSMES--HNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKV 307 (532)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 307 (532)
.|++||+.++...+..+.. |...+.+++|+|+ +.+++ +.++.+++|++.++.+
T Consensus 291 ~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~---------~~~~~--s~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 291 SIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPK---------RGLEV--NKCEIARFYKLHERKC 345 (402)
T ss_dssp CEEEEEECSSTTCEEEEEEECCSSCCSEEEECCG---------GGSCG--GGTEEEEEEEEETTEE
T ss_pred eEEEEEecCCCcceEeecccccCCcccceEEecc---------cccce--ecceeEEEEEcCCCcE
Confidence 9999999887432444333 5689999999998 45554 4577999999987654
No 96
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-35 Score=296.76 Aligned_cols=267 Identities=8% Similarity=0.025 Sum_probs=212.2
Q ss_pred CCCCCCCCcccccccCCC-------ccCccccCeeEEEEcCC------CCeEEEEEeCCeEEEEeCCCceE---------
Q 038802 28 RNLSQTPESKYWSSFKPH-------QIPGLVSSINSIVFSPT------TSHLFAATHSASLTLFSSQTLEK--------- 85 (532)
Q Consensus 28 ~~~~~~~~~~~w~~~~~~-------~~~~h~~~V~~i~~sp~------~~~l~~~~~d~~v~i~~~~~~~~--------- 85 (532)
.+.+.++.+++|+.-... .+.+|.+.|.+++|+|+ +.+||+++.||+|++||+.++..
T Consensus 177 aS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~ 256 (524)
T 2j04_B 177 DKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCE 256 (524)
T ss_dssp -----CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCC
T ss_pred ccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeec
Confidence 334678889999954332 24577899999999997 56999999999999999976532
Q ss_pred --EEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCC-ceEEEecCCCCCEEEE--EeecCCC-cEEEEEeCCCe
Q 038802 86 --HSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSR-TPLRRLKSHTRPVRFV--KYPFLDK-LHLVSGGDDGI 159 (532)
Q Consensus 86 --~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~h~~~i~~~--~~~~~~~-~~l~s~s~dg~ 159 (532)
...+.+|...|++++|++++ .|++|+.||+|++||+.++ .+...+.+|...|.++ .|+| ++ .+|++||.|++
T Consensus 257 ~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~-~g~~~laS~S~D~t 334 (524)
T 2j04_B 257 KPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD-FEDTVVSTVAVDGY 334 (524)
T ss_dssp SCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCT-TSCCEEEEEETTSE
T ss_pred CceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCC-CCCeEEEEeccCCe
Confidence 23677899999999999864 8999999999999999876 4456688999999999 5666 66 89999999999
Q ss_pred EEEEECCCCeEEEeccCCCC--ceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEE
Q 038802 160 VKFWDVAGESVVLDLFGHKD--YVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLI 237 (532)
Q Consensus 160 i~iwd~~~~~~~~~~~~~~~--~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 237 (532)
|++||++++++...+.+|.. .|.+++|+| ++..+++++.|++|++||++++.....+. +|...|.+++|+|+|.+|
T Consensus 335 vklWD~~~~~~~~~~~~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~-gH~~~V~sva~Sp~g~~l 412 (524)
T 2j04_B 335 FYIFNPKDIATTKTTVSRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLV-SRETTITAIGVSRLHPMV 412 (524)
T ss_dssp EEEECGGGHHHHCEEEEECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEE-ECSSCEEEEECCSSCCBC
T ss_pred EEEEECCCCCcccccccccccCcccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeee-cCCCceEEEEeCCCCCeE
Confidence 99999998876666666653 578999999 89999999999999999999876655544 799999999999999999
Q ss_pred EEEc-CCeEEEEEccCC-------------------------------------------CeeeEEccCCCcceEEEEEe
Q 038802 238 ATAG-GNSVKIWDLIGG-------------------------------------------GKMVYSMESHNKTVTSVCVG 273 (532)
Q Consensus 238 ~~~~-d~~i~iwd~~~~-------------------------------------------~~~~~~~~~~~~~i~~~~~~ 273 (532)
++|+ |++|++||+... +..+..+.+|...|.+++|+
T Consensus 413 ~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafs 492 (524)
T 2j04_B 413 LAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWN 492 (524)
T ss_dssp EEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEEC
T ss_pred EEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECC
Confidence 9999 999999985311 01223345678889999999
Q ss_pred ccCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 274 RVGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 274 ~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
|++.. +..+++|+.||.|+||++.-
T Consensus 493 p~~~~------~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 493 ETSAG------GKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp CSTTT------TTEEEEECTTSEEEEEECSC
T ss_pred CCCCc------cHHHHhhccCceEEEEEccc
Confidence 98521 45899999999999999764
No 97
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-33 Score=280.36 Aligned_cols=261 Identities=15% Similarity=0.234 Sum_probs=218.9
Q ss_pred CeEEEEeCCCceEEEEeeccCceeEEEEEccCCC-EEEEEcCCCCEEEEEC----CCCc------eEEEecC--------
Q 038802 73 ASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGS-LLAASDLSGLIQVFDV----KSRT------PLRRLKS-------- 133 (532)
Q Consensus 73 ~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~----~~~~------~~~~~~~-------- 133 (532)
..+.+|+.+..........|.+.|++++|+|+++ +|++|+.||.|++||+ .+++ ....+..
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (425)
T 1r5m_A 25 SIDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASS 104 (425)
T ss_dssp ---------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC---
T ss_pred cccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccc
Confidence 3456788776666666667779999999999999 9999999999999999 8877 4555543
Q ss_pred --CCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccC
Q 038802 134 --HTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVE 211 (532)
Q Consensus 134 --h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~ 211 (532)
|.+.|.+++|+| ++.+|++|+.||.|++|| .+++.+..+..|...|.+++|+| ++++|++++.||.|++||++++
T Consensus 105 ~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~ 181 (425)
T 1r5m_A 105 GKTTNQVTCLAWSH-DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISG 181 (425)
T ss_dssp ---CBCEEEEEECT-TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTT
T ss_pred cCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCC
Confidence 678999999999 999999999999999999 67788888999999999999999 9999999999999999998764
Q ss_pred CceeE-------------------------------------------------------EEecCCCcEEEEEEecCCCE
Q 038802 212 NSKSV-------------------------------------------------------MEVNHGKPIEDVMFLPSGGL 236 (532)
Q Consensus 212 ~~~~~-------------------------------------------------------~~~~~~~~v~~i~~~~~~~~ 236 (532)
..... ....|...|.+++|+|++.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 261 (425)
T 1r5m_A 182 TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKL 261 (425)
T ss_dssp EEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTE
T ss_pred cEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCE
Confidence 32211 11246788999999999999
Q ss_pred EEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cC
Q 038802 237 IATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FP 314 (532)
Q Consensus 237 l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~ 314 (532)
+++++ |+.|++||+.++ .....+..|...|.+++|+|+ + ++++++.||.|++||+.+++.+..+. +.
T Consensus 262 l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~---------~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 330 (425)
T 1r5m_A 262 LLSASDDGTLRIWHGGNG-NSQNCFYGHSQSIVSASWVGD---------D-KVISCSMDGSVRLWSLKQNTLLALSIVDG 330 (425)
T ss_dssp EEEEETTSCEEEECSSSB-SCSEEECCCSSCEEEEEEETT---------T-EEEEEETTSEEEEEETTTTEEEEEEECTT
T ss_pred EEEEcCCCEEEEEECCCC-ccceEecCCCccEEEEEECCC---------C-EEEEEeCCCcEEEEECCCCcEeEecccCC
Confidence 99998 899999999876 677888889999999999998 5 89999999999999999999988887 67
Q ss_pred CCeeEEEEecCCCEEEEEecCCcEEEEeecCcc
Q 038802 315 APLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKE 347 (532)
Q Consensus 315 ~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~ 347 (532)
.+|.+++|+|++++|++|+.||.|++|++.+.+
T Consensus 331 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 331 VPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred ccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 899999999999999999999999999998765
No 98
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-34 Score=285.03 Aligned_cols=262 Identities=11% Similarity=0.123 Sum_probs=214.8
Q ss_pred ccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceE
Q 038802 49 GLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPL 128 (532)
Q Consensus 49 ~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~ 128 (532)
.....|.+++|+|||+++|+++.|++|+ |...+ ..+.+|...|.+++|+|+| .++.+.+|+.+ ..
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~---~~ 77 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQ---QN 77 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCC---SS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCC---Cc
Confidence 3457899999999999999999999999 75544 4447999999999999998 46666565543 22
Q ss_pred EEec-CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCC-----ceEEEEEeCCCCCEEEEEeCCCe
Q 038802 129 RRLK-SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKD-----YVRCGDCSPVNGDMFVTGSYDHT 202 (532)
Q Consensus 129 ~~~~-~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-----~v~~i~~~~~~~~~l~s~s~dg~ 202 (532)
..+. .|...|.+++|+| ++..|++++.||.|++||..+ ++..+. |.. .|.+++|+| ++++|++|+.||+
T Consensus 78 ~~~~~~~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGt 152 (588)
T 2j04_A 78 GLLNSQPVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGE 152 (588)
T ss_dssp CSSTTSCSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSE
T ss_pred eEeecCCCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCE
Confidence 2233 4688999999999 999999999999999999644 666666 665 499999999 9999999999999
Q ss_pred EEEEEcccCCc-------eeEEE---ecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCe--eeEEc-cCCCcceEE
Q 038802 203 VKLWDVRVENS-------KSVME---VNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGK--MVYSM-ESHNKTVTS 269 (532)
Q Consensus 203 i~iwd~~~~~~-------~~~~~---~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~--~~~~~-~~~~~~i~~ 269 (532)
|++||+.++.. ...+. .+|...|.+++|+|+| +++++.|+.|++||+.+... ...++ .+|...|.+
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 99999988643 12222 3577899999999999 55555599999999987632 23455 478899999
Q ss_pred EEEeccCCCCCccccccEEEEEecCCeEEEEECCCceE-EEeeecCCCeeEEEE--ecCCCEEEEEecCCcEEEEeec
Q 038802 270 VCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKV-THSMRFPAPLMSVAF--SPDCMTRVIGTSNGTIFAGRRK 344 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~v~~~~~--s~~~~~l~~g~~dg~i~iw~~~ 344 (532)
++|+ + ..+++++ ++.|++||+.+++. ...+.|.+.|.+++| +|++..+++++.||. ++|..+
T Consensus 232 vaFs-g----------~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 232 LKIV-D----------YKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEE-T----------TEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEE-C----------CEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 9998 3 3677777 79999999999888 555578999999999 999999999999999 999975
No 99
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.3e-33 Score=272.45 Aligned_cols=279 Identities=11% Similarity=0.160 Sum_probs=217.3
Q ss_pred ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEE-EEcCCCCEEEEECCC
Q 038802 46 QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLA-ASDLSGLIQVFDVKS 124 (532)
Q Consensus 46 ~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~ 124 (532)
+..+|.+.|++++|+|||+++++|+.++ +++||..+++....... ..+..+++.++++.++ +|+.|++|++||..+
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 3478999999999999999998887664 78999988776654432 3578888999888874 677789999999999
Q ss_pred CceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC-eEEEeccCCCCceEEEEEeCCCCCEEEE--EeCCC
Q 038802 125 RTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE-SVVLDLFGHKDYVRCGDCSPVNGDMFVT--GSYDH 201 (532)
Q Consensus 125 ~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~l~s--~s~dg 201 (532)
++.+..+. |...|.++.|++ + .++++ .|+.|++||+.++ +.+..+.. +...+++++ .++++ |+.||
T Consensus 91 ~~~~~~~~-~~~~v~~v~~~~-~--~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~---~~la~~sg~~~g 159 (355)
T 3vu4_A 91 KQDVSRIK-VDAPVKDLFLSR-E--FIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN---GLLVYSNEFNLG 159 (355)
T ss_dssp TEEEEEEE-CSSCEEEEEECS-S--EEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET---TEEEEEESSCTT
T ss_pred CcEEEEEE-CCCceEEEEEcC-C--EEEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc---cEEEEeCCCcCc
Confidence 99998887 677999999976 3 34444 4789999999988 66555543 444566666 55655 68899
Q ss_pred eEEEEEcccCCc--------------e-eEEEecCCCcEEEEEEecCCCEEEEEc-CCe-EEEEEccCCCeeeEEcc-C-
Q 038802 202 TVKLWDVRVENS--------------K-SVMEVNHGKPIEDVMFLPSGGLIATAG-GNS-VKIWDLIGGGKMVYSME-S- 262 (532)
Q Consensus 202 ~i~iwd~~~~~~--------------~-~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~-i~iwd~~~~~~~~~~~~-~- 262 (532)
.|++||++++.. . .....+|..+|.+++|+|+|++|++++ |++ |++||+.++ +++..+. +
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~-~~~~~~~~g~ 238 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG-VLVREFRRGL 238 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC-CEEEEEECTT
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC-cEEEEEEcCC
Confidence 999999987541 0 233348999999999999999999999 898 999999987 6777776 5
Q ss_pred CCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEE--Ee------------------ee----cCCCee
Q 038802 263 HNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVT--HS------------------MR----FPAPLM 318 (532)
Q Consensus 263 ~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~------------------~~----~~~~v~ 318 (532)
|...|.+++|+|+ +.+|++++.|+.|++||+...... .. +. ...+..
T Consensus 239 h~~~v~~~~~s~~---------~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 3vu4_A 239 DRADVVDMKWSTD---------GSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGC 309 (355)
T ss_dssp CCSCEEEEEECTT---------SCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCC
T ss_pred CCCcEEEEEECCC---------CCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCce
Confidence 9999999999999 689999999999999999764211 00 11 112347
Q ss_pred EEEEecCCCEEEEEecCCcEEEEeecCccc
Q 038802 319 SVAFSPDCMTRVIGTSNGTIFAGRRKKKEN 348 (532)
Q Consensus 319 ~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~ 348 (532)
.++|++||+++++++.||.+++|++...+.
T Consensus 310 ~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 310 KIAWISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 799999999999999999999999976543
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-33 Score=264.66 Aligned_cols=265 Identities=17% Similarity=0.276 Sum_probs=225.5
Q ss_pred CCCCCCCcccccccCC---CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCc---eEEEEeeccCceeEEEEEc
Q 038802 29 NLSQTPESKYWSSFKP---HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTL---EKHSAISSFKDVVTCSSFR 102 (532)
Q Consensus 29 ~~~~~~~~~~w~~~~~---~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~ 102 (532)
..+.++.+++|+.-.. ..+..|.+.|.+++|+|+++++++++.||.|++|++... +....+..|...|.+++|
T Consensus 34 s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~- 112 (313)
T 3odt_A 34 SVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF- 112 (313)
T ss_dssp EEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE-
T ss_pred EEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe-
Confidence 3467889999996443 235789999999999999999999999999999998653 567778899999999999
Q ss_pred cCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccC-CCCce
Q 038802 103 PDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFG-HKDYV 181 (532)
Q Consensus 103 ~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~v 181 (532)
+++++++|+.||.|++|| .+.....+..|...+.++.|.|.++..+++++.||.|++|| .++....+.. |...+
T Consensus 113 -~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i 187 (313)
T 3odt_A 113 -QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVV 187 (313)
T ss_dssp -ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCE
T ss_pred -cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccE
Confidence 577999999999999999 67888889999999999999887889999999999999999 4566666766 99999
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEcc
Q 038802 182 RCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSME 261 (532)
Q Consensus 182 ~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~ 261 (532)
.+++|+| ++. +++++.||.|++||+++++....+. .|..+|.+++|+|++.+++++.|+.|++||+.++ +....+.
T Consensus 188 ~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~ 263 (313)
T 3odt_A 188 RHLAVVD-DGH-FISCSNDGLIKLVDMHTGDVLRTYE-GHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENG-SLKQVIT 263 (313)
T ss_dssp EEEEEEE-TTE-EEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSCEEEEETTSEEEEECTTTC-CEEEEEE
T ss_pred EEEEEcC-CCe-EEEccCCCeEEEEECCchhhhhhhh-cCCceEEEEEEecCCCEEEEecCCEEEEEECCCC-ceeEEEe
Confidence 9999999 666 9999999999999999876555554 6899999999999996444444999999999887 7888888
Q ss_pred CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeec
Q 038802 262 SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRF 313 (532)
Q Consensus 262 ~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 313 (532)
.|...|.+++|+|++ . +++++.||.|++||+.+++.......
T Consensus 264 ~~~~~i~~~~~~~~~---------~-~~~~~~dg~i~iw~~~~~~~~~~~~~ 305 (313)
T 3odt_A 264 LPAISIWSVDCMSNG---------D-IIVGSSDNLVRIFSQEKSRWASEDEI 305 (313)
T ss_dssp CSSSCEEEEEECTTS---------C-EEEEETTSCEEEEESCGGGCCC----
T ss_pred ccCceEEEEEEccCC---------C-EEEEeCCCcEEEEeCCCCceeehhhh
Confidence 999999999999984 4 77899999999999998776555443
No 101
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=9.4e-34 Score=282.80 Aligned_cols=253 Identities=21% Similarity=0.300 Sum_probs=218.0
Q ss_pred CccCccccCeeEEEEcCC-CCeEEEEEeCCeEEEEeCCC----------ceEEEEeeccCceeEEEEEccCCC-EEEEEc
Q 038802 45 HQIPGLVSSINSIVFSPT-TSHLFAATHSASLTLFSSQT----------LEKHSAISSFKDVVTCSSFRPDGS-LLAASD 112 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~-~~~l~~~~~d~~v~i~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~ 112 (532)
....+|.+.|++++|+|+ +.++++++.+|.|++|++.+ ......+.+|...|++++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 345789999999999997 67899999999999999876 677788899999999999999988 999999
Q ss_pred CCCCEEEEECCCCce-------EEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC---eEEEeccCCCCceE
Q 038802 113 LSGLIQVFDVKSRTP-------LRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE---SVVLDLFGHKDYVR 182 (532)
Q Consensus 113 ~dg~i~iwd~~~~~~-------~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~---~~~~~~~~~~~~v~ 182 (532)
.||.|++||+.++.. ...+.+|...|.+++|+|.++.++++++.||.|++||++++ +.+..+..|...|+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999987322 45677899999999999977889999999999999999987 56677788999999
Q ss_pred EEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCC-EEEEEc-CCeEEEEEccCCC------
Q 038802 183 CGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGG-LIATAG-GNSVKIWDLIGGG------ 254 (532)
Q Consensus 183 ~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~~-d~~i~iwd~~~~~------ 254 (532)
+++|+|....++++|+.||.|++||+++..........|...|.+++|+|++. ++++++ |+.|++||+....
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 361 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 361 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHH
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcc
Confidence 99999933347999999999999999985444344447899999999999985 677777 8999999998722
Q ss_pred -------eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc
Q 038802 255 -------KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM 305 (532)
Q Consensus 255 -------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 305 (532)
..+....+|...|++++|+|++ ..++++++.||.|++|++...
T Consensus 362 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~--------~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 362 DAEDGPPELLFIHGGHTAKISDFSWNPNE--------PWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HHHHCCTTEEEECCCCSSCEEEEEECSSS--------TTEEEEEETTSEEEEEEECHH
T ss_pred ccccCCcceEEEcCCCCCCceEEEECCCC--------CCEEEEEECCCCEEEeEcccc
Confidence 5677888999999999999994 348999999999999998763
No 102
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.9e-33 Score=276.37 Aligned_cols=257 Identities=19% Similarity=0.226 Sum_probs=213.1
Q ss_pred EEeCCCceEEEEeeccCceeEEEEEccCC-CEEEEEcCCCCEEEEECCCCceEEEec--CCCCCEEEEEeecCCCcEEEE
Q 038802 77 LFSSQTLEKHSAISSFKDVVTCSSFRPDG-SLLAASDLSGLIQVFDVKSRTPLRRLK--SHTRPVRFVKYPFLDKLHLVS 153 (532)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~--~h~~~i~~~~~~~~~~~~l~s 153 (532)
+|+..+......+.+|.+.|++++|+|++ ++|++|+.||.|++||+.+++....+. +|...|.+++|+|.++.+|++
T Consensus 57 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 136 (383)
T 3ei3_B 57 IRSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFV 136 (383)
T ss_dssp HHHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEE
T ss_pred cccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEE
Confidence 34445667778889999999999999999 999999999999999999888777765 699999999999966789999
Q ss_pred EeCCCeEEEEECCCCeEEEecc---CCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEE
Q 038802 154 GGDDGIVKFWDVAGESVVLDLF---GHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMF 230 (532)
Q Consensus 154 ~s~dg~i~iwd~~~~~~~~~~~---~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~ 230 (532)
++.|+.|++||+.+ ..+..+. .|...|.+++|+| ++.+|++|+.||.|++||++ +.....+ ..|...|.+++|
T Consensus 137 ~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~~~-~~h~~~v~~~~~ 212 (383)
T 3ei3_B 137 SSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD-GHEIFKE-KLHKAKVTHAEF 212 (383)
T ss_dssp EETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEETT-SCEEEEE-ECSSSCEEEEEE
T ss_pred EeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEECC-CCEEEEe-ccCCCcEEEEEE
Confidence 99999999999986 4444453 3458899999999 99999999999999999995 3333333 378999999999
Q ss_pred ecCCC-EEEEEc-CCeEEEEEccCC---CeeeEEccCCCcceEEEEEec-cCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 231 LPSGG-LIATAG-GNSVKIWDLIGG---GKMVYSMESHNKTVTSVCVGR-VGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 231 ~~~~~-~l~~~~-d~~i~iwd~~~~---~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
+|++. ++++++ |+.|++||+++. ..++..+ +|...|.+++|+| + +.++++++.||.|++||+.+
T Consensus 213 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~---------~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 213 NPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTD---------STKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp CSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTT---------SCEEEEEESSSEEEEEETTB
T ss_pred CCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCC---------CCEEEEEcCCCcEEEEECCC
Confidence 99998 888888 899999999872 2455555 6999999999999 7 67999999999999999998
Q ss_pred ceEEEeee-c-------C----------CCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 305 MKVTHSMR-F-------P----------APLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 305 ~~~~~~~~-~-------~----------~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
++....+. + . ..+..++|+|+|++ +|+.||.|++|++.+++..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~ 343 (383)
T 3ei3_B 283 WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLV 343 (383)
T ss_dssp TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEE
T ss_pred CccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCcee
Confidence 76544443 1 1 34455677777766 7789999999999887654
No 103
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.2e-33 Score=274.21 Aligned_cols=301 Identities=16% Similarity=0.167 Sum_probs=217.8
Q ss_pred CCCCCCcccccccCCCcc----------------CccccCeeEEEEcC-CCCeEEEEEeCCeEEEEeCCCceEEEEeecc
Q 038802 30 LSQTPESKYWSSFKPHQI----------------PGLVSSINSIVFSP-TTSHLFAATHSASLTLFSSQTLEKHSAISSF 92 (532)
Q Consensus 30 ~~~~~~~~~w~~~~~~~~----------------~~h~~~V~~i~~sp-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~ 92 (532)
...++.+++|+....... .+|.+.|++++|+| ++.++++++.||.|++||+.+++....+. +
T Consensus 62 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~ 140 (408)
T 4a11_B 62 GGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-F 140 (408)
T ss_dssp EETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-C
T ss_pred EcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-C
Confidence 456888999986544322 25999999999999 77799999999999999999998887776 6
Q ss_pred CceeEEEEEccC---CCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCc-EEEEEeCCCeEEEEECCCC
Q 038802 93 KDVVTCSSFRPD---GSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKL-HLVSGGDDGIVKFWDVAGE 168 (532)
Q Consensus 93 ~~~v~~~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~-~l~s~s~dg~i~iwd~~~~ 168 (532)
...+.++.|+|. +.++++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++. .+++|+.||.|++||++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 141 EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP-RYDYILATASADSRVKLWDVRRA 219 (408)
T ss_dssp SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCS
T ss_pred CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCC
Confidence 788999999984 45999999999999999999999999999999999999999 665 6999999999999999876
Q ss_pred e-EEEec---------------cCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEe-----cCCCcEEE
Q 038802 169 S-VVLDL---------------FGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEV-----NHGKPIED 227 (532)
Q Consensus 169 ~-~~~~~---------------~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-----~~~~~v~~ 227 (532)
. .+..+ ..|...|.+++|+| ++.+|++++.||.|++||++++........ ........
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (408)
T 4a11_B 220 SGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFT 298 (408)
T ss_dssp SCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCE
T ss_pred CcccccccccccccceeeccccccccCceeEEEEcC-CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeE
Confidence 5 33333 57889999999999 999999999999999999998655433221 11112222
Q ss_pred EEEecCCCEEEEEcCCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceE
Q 038802 228 VMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKV 307 (532)
Q Consensus 228 i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 307 (532)
....+.+.+++++.++.|++||+.++ .++..+.+|...|++++|+|+ +.+|++++.||.|++||+.+++.
T Consensus 299 ~~~~~~~~~~~~~~~~~i~v~d~~~~-~~~~~~~~~~~~v~~~~~s~~---------~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 299 VSCGCSSEFVFVPYGSTIAVYTVYSG-EQITMLKGHYKTVDCCVFQSN---------FQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp ECCSSSSCEEEEEETTEEEEEETTTC-CEEEEECCCSSCEEEEEEETT---------TTEEEEEETTSCEEEEEECC---
T ss_pred EecCCCceEEEEecCCEEEEEECcCC-cceeeeccCCCeEEEEEEcCC---------CCEEEEECCCCeEEEEeCCCCCc
Confidence 23333455666666999999999887 788999999999999999999 67999999999999999999888
Q ss_pred EEeeecCCCeeEEEEec-CCCEEEEEecCCcEEEEeecC
Q 038802 308 THSMRFPAPLMSVAFSP-DCMTRVIGTSNGTIFAGRRKK 345 (532)
Q Consensus 308 ~~~~~~~~~v~~~~~s~-~~~~l~~g~~dg~i~iw~~~~ 345 (532)
+.......... .+.+ +...+.+.+.+|.+++|+.+.
T Consensus 369 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 369 VPDDDETTTKS--QLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp ---------------------------------------
T ss_pred cCCCCceEecc--ccccccceeecccCccCceeecCCcc
Confidence 76654332222 2333 334455677889999998764
No 104
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-34 Score=281.01 Aligned_cols=274 Identities=14% Similarity=0.091 Sum_probs=214.6
Q ss_pred CCCCCCcccccccCCCccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEE
Q 038802 30 LSQTPESKYWSSFKPHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLA 109 (532)
Q Consensus 30 ~~~~~~~~~w~~~~~~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 109 (532)
.+.+..++ +...+..+.+|...|.+++|+|+| .++.+.+|+.+.. ....+ .|.+.|.+++|+|+|++||
T Consensus 33 as~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~-~~~~~-~~~~~V~~vawSPdG~~LA 101 (588)
T 2j04_A 33 TFPDISIG--QPKYAKDINCNSKNLFHVKEFPLE-------FENKLDFELAQQN-GLLNS-QPVCYPRVCKPSPIDDWMA 101 (588)
T ss_dssp CSSSEEEE--EECCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS-CSSTT-SCSCCEEEEEECSSSSCEE
T ss_pred EcCCceee--cccccceecCCCccEEEEEECCCC-------CcceEEEEeCCCc-eEeec-CCCCcEEEEEECCCCCEEE
Confidence 34555555 444455668999999999999998 4555555553322 22222 4588999999999999999
Q ss_pred EEcCCCCEEEEECCCCceEEEecCCCC-----CEEEEEeecCCCcEEEEEeCCCeEEEEECCCCe-------EEEec---
Q 038802 110 ASDLSGLIQVFDVKSRTPLRRLKSHTR-----PVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGES-------VVLDL--- 174 (532)
Q Consensus 110 ~g~~dg~i~iwd~~~~~~~~~~~~h~~-----~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~-------~~~~~--- 174 (532)
+++.||.|++||.+. ++..+. |.. .|.+++|+| ++++|++|+.||+|++||+.++. .+.++
T Consensus 102 s~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~ 177 (588)
T 2j04_A 102 VLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLS 177 (588)
T ss_dssp EEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECS
T ss_pred EEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecc
Confidence 999999999999654 666677 665 499999999 99999999999999999999875 35665
Q ss_pred -cCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCce---eEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEc
Q 038802 175 -FGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSK---SVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDL 250 (532)
Q Consensus 175 -~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~---~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~ 250 (532)
.+|.+.|.+++|+| ++ +++++.|++|++||+...... ..+...|...|.+++|+ |+.+++++++.|++||+
T Consensus 178 ~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~ 252 (588)
T 2j04_A 178 DAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDL 252 (588)
T ss_dssp CTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEEEET
T ss_pred cccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEEEEC
Confidence 67889999999999 77 888999999999999876532 22323677899999999 68999999999999999
Q ss_pred cCCCeeeEEccCCCcceEEEEE--eccCCCCCccccccEEEEEecCCeEEEEECCCce----------------------
Q 038802 251 IGGGKMVYSMESHNKTVTSVCV--GRVGNESGEEAMQYRILSVALDGYMKVFDYGKMK---------------------- 306 (532)
Q Consensus 251 ~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---------------------- 306 (532)
.++ .......+|...+..+.| +|+ +..+++++.||+ ++|......
T Consensus 253 ~~~-~~~~~~~gh~~~V~~va~~~s~d---------~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g 321 (588)
T 2j04_A 253 KNY-SISSLKTGSLENFHIIPLNHEKE---------STILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIW 321 (588)
T ss_dssp TTT-EEEEEECSCCSCCCEEEETTCSS---------CEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTT
T ss_pred CCC-eEEEEEcCCCceEEEEEeeeCCC---------CCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCC
Confidence 876 543333379999999999 888 678999999999 999875321
Q ss_pred -EEEeeecCCCeeEEEEecCCCEEEEEec
Q 038802 307 -VTHSMRFPAPLMSVAFSPDCMTRVIGTS 334 (532)
Q Consensus 307 -~~~~~~~~~~v~~~~~s~~~~~l~~g~~ 334 (532)
....+.....|++++|||||+.+|+++.
T Consensus 322 ~~l~~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 322 NEFNNYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp TSSSSSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred CceeeeccceEEEEEEECCCCCEEEEEEe
Confidence 0111112224889999999999998864
No 105
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=283.51 Aligned_cols=245 Identities=13% Similarity=0.254 Sum_probs=205.3
Q ss_pred ccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCc-----------eEEEecCCC------------CCEEEEEeecCC
Q 038802 91 SFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRT-----------PLRRLKSHT------------RPVRFVKYPFLD 147 (532)
Q Consensus 91 ~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~-----------~~~~~~~h~------------~~i~~~~~~~~~ 147 (532)
.+.+.|++++|+|+|++||+|+.||.|++||+.++. ....+.+|. ..|.+++|+| +
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~-~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP-Q 104 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC-C
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC-C
Confidence 357899999999999999999999999999998876 577888998 8899999999 6
Q ss_pred C--cEEEEEeCCCeEEEEECCCCeEE---------------------------------------Ee-ccCCCCceEEEE
Q 038802 148 K--LHLVSGGDDGIVKFWDVAGESVV---------------------------------------LD-LFGHKDYVRCGD 185 (532)
Q Consensus 148 ~--~~l~s~s~dg~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~i~ 185 (532)
+ ..+++++.|++|++||+.++... .. ..+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 6 78999999999999999764432 12 367999999999
Q ss_pred EeCCCCCEEEEEeCCCeEEEEEcccCCc-eeEE------EecCCCcEEEEEEecCC-CEEEEEc-CCeEEEEEccCCCee
Q 038802 186 CSPVNGDMFVTGSYDHTVKLWDVRVENS-KSVM------EVNHGKPIEDVMFLPSG-GLIATAG-GNSVKIWDLIGGGKM 256 (532)
Q Consensus 186 ~~~~~~~~l~s~s~dg~i~iwd~~~~~~-~~~~------~~~~~~~v~~i~~~~~~-~~l~~~~-d~~i~iwd~~~~~~~ 256 (532)
|+| ++++|++| .|+.|++||+++... .... ...|...|.+++|+|++ .++++++ |+.|++||++++ ..
T Consensus 185 ~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~ 261 (447)
T 3dw8_B 185 INS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS-AL 261 (447)
T ss_dssp ECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC-SS
T ss_pred EcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC-cc
Confidence 999 99999998 799999999984322 2211 23688999999999998 8999998 999999999887 43
Q ss_pred ----eEEccCCCc------------ceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC-ceEEEeeecCCC---
Q 038802 257 ----VYSMESHNK------------TVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK-MKVTHSMRFPAP--- 316 (532)
Q Consensus 257 ----~~~~~~~~~------------~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~--- 316 (532)
...+..|.. .|.+++|+|+ +.+|++++. |.|++||+.+ ++++..+.....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~ 331 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHS---------GRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRS 331 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTT---------SSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTT
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCC---------CCEEEEeeC-CeEEEEeCCCCccccceeeccccccc
Confidence 677777776 8999999998 678999988 9999999997 777777764333
Q ss_pred -------------eeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 317 -------------LMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 317 -------------v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+..++|+|++++|++|+.||.|++|++.+++..
T Consensus 332 ~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 332 KLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp THHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred cccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 334999999999999999999999999987654
No 106
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=3.4e-32 Score=272.01 Aligned_cols=278 Identities=12% Similarity=0.036 Sum_probs=235.7
Q ss_pred ccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEE-----EeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCC
Q 038802 51 VSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHS-----AISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSR 125 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 125 (532)
...+.+++|+|++.++++++.++.|++||..+++... .+.+|...|.+++|+|++.++++++.|+.|++||+.++
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~ 201 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL 201 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc
Confidence 3456799999977777777778899999999988877 34578889999999999999999999999999999999
Q ss_pred ceEEEecCCCCCEEEEEeecCCCcEE-EEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEe------
Q 038802 126 TPLRRLKSHTRPVRFVKYPFLDKLHL-VSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGS------ 198 (532)
Q Consensus 126 ~~~~~~~~h~~~i~~~~~~~~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s------ 198 (532)
+.+..+..|...+.+++|+| ++..+ ++++.|+.|++||+.+++.+..+..+ ..+.+++|+| +++.+++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~-~g~~l~~~~~~~~~~ 278 (433)
T 3bws_A 202 AYKATVDLTGKWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSK-DGKELYIAQFSASNQ 278 (433)
T ss_dssp CEEEEEECSSSSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECT-TSSEEEEEEEESCTT
T ss_pred eEEEEEcCCCCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcC-CCCEEEEEECCCCcc
Confidence 99999999999999999999 77666 45558999999999999988887754 4589999999 888888888
Q ss_pred --CCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEE-EEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEec
Q 038802 199 --YDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLI-ATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGR 274 (532)
Q Consensus 199 --~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~ 274 (532)
.||.|++||+++++... ...+...+.+++|+|+++.+ ++++ ++.|++||+.++ +....+. +...+.+++|+|
T Consensus 279 ~~~dg~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~-~~~~~~~-~~~~~~~~~~s~ 354 (433)
T 3bws_A 279 ESGGGRLGIYSMDKEKLID--TIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK-KVQKSIP-VFDKPNTIALSP 354 (433)
T ss_dssp CSCCEEEEEEETTTTEEEE--EEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT-EEEEEEE-CSSSEEEEEECT
T ss_pred ccCCCeEEEEECCCCcEEe--eccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC-cEEEEec-CCCCCCeEEEcC
Confidence 48899999998754333 33556688999999999755 5545 899999999876 6666664 677899999999
Q ss_pred cCCCCCccccccEEEEEec---------------CCeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEec-CCcE
Q 038802 275 VGNESGEEAMQYRILSVAL---------------DGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTS-NGTI 338 (532)
Q Consensus 275 ~~~~~~~~~~~~~l~s~~~---------------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~-dg~i 338 (532)
+ +.++++++. ||.|++||+.+++.+..+.....+.+++|+|+|++|++++. ||.|
T Consensus 355 d---------g~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i 425 (433)
T 3bws_A 355 D---------GKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQI 425 (433)
T ss_dssp T---------SSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEE
T ss_pred C---------CCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeE
Confidence 9 556666665 57999999999999999988888999999999999998875 9999
Q ss_pred EEEeec
Q 038802 339 FAGRRK 344 (532)
Q Consensus 339 ~iw~~~ 344 (532)
++|+++
T Consensus 426 ~v~~~~ 431 (433)
T 3bws_A 426 RVYRRD 431 (433)
T ss_dssp EEEEET
T ss_pred EEEEec
Confidence 999986
No 107
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.4e-34 Score=302.13 Aligned_cols=252 Identities=17% Similarity=0.254 Sum_probs=216.0
Q ss_pred EEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECC--CCceEEEecCCCCCEEEEEeecCC--CcEEEEEeCCCeEEE
Q 038802 87 SAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVK--SRTPLRRLKSHTRPVRFVKYPFLD--KLHLVSGGDDGIVKF 162 (532)
Q Consensus 87 ~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~~~h~~~i~~~~~~~~~--~~~l~s~s~dg~i~i 162 (532)
..+.+|.+.|++++|+|++++|++|+.||.|++||+. ++..+..+.+|.++|++++|+| + +.++++|+.||.|++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGKVLI 81 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECC-TTSCSEEEEEETTSCEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecC-CCCCCEEEEEeCCCeEEE
Confidence 4568999999999999999999999999999999997 5577888999999999999998 5 899999999999999
Q ss_pred EECCCCe--EEEeccCCCCceEEEEEeCCC--CCEEEEEeCCCeEEEEEcccCCce-eEEEecCCCcEEEEEEec-----
Q 038802 163 WDVAGES--VVLDLFGHKDYVRCGDCSPVN--GDMFVTGSYDHTVKLWDVRVENSK-SVMEVNHGKPIEDVMFLP----- 232 (532)
Q Consensus 163 wd~~~~~--~~~~~~~~~~~v~~i~~~~~~--~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~~~v~~i~~~~----- 232 (532)
||+.+++ .+..+.+|...|.+++|+| + +..+++|+.||.|++||+++.... ......|...|.+++|+|
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred EECCCCcccccccccCCCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence 9999987 7777888999999999999 7 899999999999999999886433 333347899999999999
Q ss_pred --------CCCEEEEEc-CCeEEEEEccCCC---eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEE
Q 038802 233 --------SGGLIATAG-GNSVKIWDLIGGG---KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVF 300 (532)
Q Consensus 233 --------~~~~l~~~~-d~~i~iwd~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iw 300 (532)
++.++++++ ||.|++||++++. .+...+.+|...|++++|+|++.. +.++++++.||.|++|
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~------~~~l~s~s~Dg~I~iw 234 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL------RSYLASVSQDRTCIIW 234 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS------SEEEEEEESSSCEEEE
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCC------CCEEEEEecCCEEEEe
Confidence 488888888 9999999998764 456778899999999999998210 3689999999999999
Q ss_pred ECCCce------EEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeecCc
Q 038802 301 DYGKMK------VTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 301 d~~~~~------~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~ 346 (532)
|+.++. ......+...|++++|+|+|+++++|+.||.|++|++.+.
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp EESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred cCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 998863 1122236789999999999999999999999999999864
No 108
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-33 Score=300.87 Aligned_cols=249 Identities=15% Similarity=0.204 Sum_probs=215.8
Q ss_pred ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCC--CceEEEEeeccCceeEEEEEccC--CCEEEEEcCCCCEEEEE
Q 038802 46 QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQ--TLEKHSAISSFKDVVTCSSFRPD--GSLLAASDLSGLIQVFD 121 (532)
Q Consensus 46 ~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~dg~i~iwd 121 (532)
.+.+|.++|++++|+|+++++++|+.||.|++||+. ++.....+.+|.+.|++++|+|+ +++|++|+.||.|++||
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 467999999999999999999999999999999987 56778888999999999999988 99999999999999999
Q ss_pred CCCCc--eEEEecCCCCCEEEEEeecCC--CcEEEEEeCCCeEEEEECCCC--eEEEeccCCCCceEEEEEeCC------
Q 038802 122 VKSRT--PLRRLKSHTRPVRFVKYPFLD--KLHLVSGGDDGIVKFWDVAGE--SVVLDLFGHKDYVRCGDCSPV------ 189 (532)
Q Consensus 122 ~~~~~--~~~~~~~h~~~i~~~~~~~~~--~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~~~~~v~~i~~~~~------ 189 (532)
+.+++ .+..+.+|...|.+++|+| + +..+++|+.||.|++||+.++ .....+.+|...|.+++|+|.
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred CCCCcccccccccCCCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 99886 7778889999999999999 7 899999999999999999877 334456789999999999994
Q ss_pred ------CCCEEEEEeCCCeEEEEEcccCCcee---EEEecCCCcEEEEEEecC---CCEEEEEc-CCeEEEEEccCCCe-
Q 038802 190 ------NGDMFVTGSYDHTVKLWDVRVENSKS---VMEVNHGKPIEDVMFLPS---GGLIATAG-GNSVKIWDLIGGGK- 255 (532)
Q Consensus 190 ------~~~~l~s~s~dg~i~iwd~~~~~~~~---~~~~~~~~~v~~i~~~~~---~~~l~~~~-d~~i~iwd~~~~~~- 255 (532)
++.++++|+.||+|++||++++.... .....|..+|.+++|+|+ +.++++++ ||.|++||+.++..
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~ 242 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 242 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSC
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCc
Confidence 48899999999999999998764322 222368999999999999 89999998 99999999987521
Q ss_pred ---eeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 256 ---MVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 256 ---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
.......|...|++++|+|+ +.++++++.||.|++||+.+
T Consensus 243 ~~~~~~~~~~~~~~v~~l~~spd---------g~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 243 WKKTLLKEEKFPDVLWRASWSLS---------GNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CBCCBSSSSCCSSCCCCEEECTT---------TCCEEEECSSSCEECCBCCS
T ss_pred ceeEEeccCCCCCceEEEEEcCC---------CCEEEEEcCCCEEEEEecCC
Confidence 33344568889999999999 67899999999999999874
No 109
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.1e-33 Score=277.06 Aligned_cols=270 Identities=20% Similarity=0.371 Sum_probs=219.1
Q ss_pred CCCCCcccccccCCC---ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCE
Q 038802 31 SQTPESKYWSSFKPH---QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSL 107 (532)
Q Consensus 31 ~~~~~~~~w~~~~~~---~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 107 (532)
..++.+++|+..... .+.+|.++|++++| +++++++|+.||.|++||+.+++....+.+|...|.+++|+ +.+
T Consensus 150 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~ 225 (435)
T 1p22_A 150 LRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGM 225 (435)
T ss_dssp ESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTE
T ss_pred eCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCE
Confidence 567889999865543 45799999999999 67899999999999999999999999999999999999996 459
Q ss_pred EEEEcCCCCEEEEECCCCceE---EEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEE
Q 038802 108 LAASDLSGLIQVFDVKSRTPL---RRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCG 184 (532)
Q Consensus 108 l~~g~~dg~i~iwd~~~~~~~---~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i 184 (532)
+++|+.||.|++||+.++... ..+.+|...|.+++| ++.++++|+.||.|++||+++++.+..+.+|...|.++
T Consensus 226 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~ 302 (435)
T 1p22_A 226 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL 302 (435)
T ss_dssp EEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEE
Confidence 999999999999999887655 677899999999999 56789999999999999999999999999999999999
Q ss_pred EEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCe--------
Q 038802 185 DCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGK-------- 255 (532)
Q Consensus 185 ~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~-------- 255 (532)
.++ ++++++|+.||.|++||++++.....+. .|...|.+++| ++.++++++ ||.|++||+.++..
T Consensus 303 ~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 376 (435)
T 1p22_A 303 QYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL 376 (435)
T ss_dssp EEE---TTEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTT
T ss_pred EeC---CCEEEEEeCCCeEEEEECCCCCEEEEEe-CCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccch
Confidence 984 5899999999999999999876655554 68999999998 678899888 99999999976521
Q ss_pred eeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecCCCeeEEEEec
Q 038802 256 MVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSP 324 (532)
Q Consensus 256 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~ 324 (532)
++..+.+|...|.+++| + +.++++++.||.|++||+.+...........+..++.|.+
T Consensus 377 ~~~~~~~h~~~v~~l~~--~---------~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 434 (435)
T 1p22_A 377 CLRTLVEHSGRVFRLQF--D---------EFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTYTYIS 434 (435)
T ss_dssp EEEEECCCSSCCCCEEE--C---------SSCEEECCSSSEEEEEC-----------------------
T ss_pred heeeccCCCCCeEEEEe--C---------CCEEEEEeCCCEEEEEECCCCCCcccCCCCCCccceeeec
Confidence 67888999999999999 3 5679999999999999999877666555555666666543
No 110
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.1e-32 Score=257.76 Aligned_cols=259 Identities=20% Similarity=0.312 Sum_probs=222.0
Q ss_pred CCCCcccccccCCC-----ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCC
Q 038802 32 QTPESKYWSSFKPH-----QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGS 106 (532)
Q Consensus 32 ~~~~~~~w~~~~~~-----~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 106 (532)
.+..+++|+..... .+.+|...|++++|+|+++++++|+.||.|++||+.+++.+..+.+|...+.++.+ ++.
T Consensus 43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~ 120 (318)
T 4ggc_A 43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSY 120 (318)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETT
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCC
Confidence 57889999976543 23678899999999999999999999999999999999999999999998877654 567
Q ss_pred EEEEEcCCCCEEEEECCCC-ceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeE----EEeccCCCCce
Q 038802 107 LLAASDLSGLIQVFDVKSR-TPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESV----VLDLFGHKDYV 181 (532)
Q Consensus 107 ~l~~g~~dg~i~iwd~~~~-~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~----~~~~~~~~~~v 181 (532)
.+++|+.++.+++|+.... ..+..+.+|...+.++.|.+ ++.++++++.||.|++||+.+++. ......|...|
T Consensus 121 ~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v 199 (318)
T 4ggc_A 121 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAV 199 (318)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCE
T ss_pred EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC-CCCEEEEEecCcceeEEECCCCcccccceeeecccCCce
Confidence 9999999999999998765 55677889999999999999 899999999999999999987653 34456688899
Q ss_pred EEEEEeCCCCCEE--EEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc---CCeEEEEEccCCCee
Q 038802 182 RCGDCSPVNGDMF--VTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG---GNSVKIWDLIGGGKM 256 (532)
Q Consensus 182 ~~i~~~~~~~~~l--~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~---d~~i~iwd~~~~~~~ 256 (532)
.++.++|.++..+ ++++.+++|++||.+... ......+...+..+.|+|++..+++++ |+.|++||+.++ ++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~-~~ 276 (318)
T 4ggc_A 200 KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA--CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-AK 276 (318)
T ss_dssp EEEEECTTSTTEEEEEECTTTCEEEEEETTTCC--EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-CE
T ss_pred EEEEecCCCCcEEEEEecCCCCEEEEEeccccc--ccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC-cE
Confidence 9999999555554 466788999999998744 334446778899999999998776653 789999999987 88
Q ss_pred eEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc
Q 038802 257 VYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM 305 (532)
Q Consensus 257 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 305 (532)
+..+.+|.+.|++++|+|+ +.+|++|+.||+|+|||+.+.
T Consensus 277 ~~~l~gH~~~V~~l~~spd---------g~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 277 VAELKGHTSRVLSLTMSPD---------GATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEECCCSSCEEEEEECTT---------SSCEEEEETTTEEEEECCSCC
T ss_pred EEEEcCCCCCEEEEEEcCC---------CCEEEEEecCCeEEEEECCCC
Confidence 8999999999999999999 678999999999999998764
No 111
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.2e-33 Score=282.45 Aligned_cols=267 Identities=15% Similarity=0.187 Sum_probs=207.7
Q ss_pred CCCCCCCCcccccccCCC-----ccCccccCeeEEEEcC-CCCeEEEEEeCCeEEEEeCCCceEEEEeec--cCceeEEE
Q 038802 28 RNLSQTPESKYWSSFKPH-----QIPGLVSSINSIVFSP-TTSHLFAATHSASLTLFSSQTLEKHSAISS--FKDVVTCS 99 (532)
Q Consensus 28 ~~~~~~~~~~~w~~~~~~-----~~~~h~~~V~~i~~sp-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~--~~~~v~~~ 99 (532)
...+.++.+++|+.-... .+.+|.++|++++|+| ++.+|++|+.||+|++||+.+......... +...+.++
T Consensus 136 asGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 215 (435)
T 4e54_B 136 AVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSL 215 (435)
T ss_dssp EEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCE
T ss_pred EEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEE
Confidence 345688999999864332 3468999999999998 678999999999999999987654433333 33467899
Q ss_pred EEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEe---ccC
Q 038802 100 SFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLD---LFG 176 (532)
Q Consensus 100 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~---~~~ 176 (532)
+|+|++++|++|+.||.|++||+. ++.+..+.+|...|.+++|+|....++++|+.|+.|++||+++.+.... ..+
T Consensus 216 ~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~ 294 (435)
T 4e54_B 216 DVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLP 294 (435)
T ss_dssp EEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCB
T ss_pred EECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeee
Confidence 999999999999999999999986 4567788899999999999995556889999999999999987654333 357
Q ss_pred CCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCC------CcEEEEEEecCCCEEEEEc---------
Q 038802 177 HKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHG------KPIEDVMFLPSGGLIATAG--------- 241 (532)
Q Consensus 177 ~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~------~~v~~i~~~~~~~~l~~~~--------- 241 (532)
|...|++++|+| ++.+|++|+.||+|++||++++....... .|. ..+....|+|++.+++++.
T Consensus 295 h~~~v~~~~~sp-dg~~l~s~~~D~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 372 (435)
T 4e54_B 295 HRHPVNAACFSP-DGARLLTTDQKSEIRVYSASQWDCPLGLI-PHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSC 372 (435)
T ss_dssp CSSCEEECCBCT-TSSEEEEEESSSCEEEEESSSSSSEEEEC-CCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCS
T ss_pred ccccccceeECC-CCCeeEEEcCCCEEEEEECCCCccceEEe-cccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEE
Confidence 999999999999 99999999999999999999866554432 221 1233456666666555543
Q ss_pred ----CCeEEEEEccCCCeeeEE-ccCCCcceEEE-EEeccCCCCCccccccEEEEEecCCeEEEEECCCceEE
Q 038802 242 ----GNSVKIWDLIGGGKMVYS-MESHNKTVTSV-CVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVT 308 (532)
Q Consensus 242 ----d~~i~iwd~~~~~~~~~~-~~~~~~~i~~~-~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (532)
++.|++||..++ +.+.. ..+|...|.++ +|+|+ +.+|++|+ |+.|+|||+++++..
T Consensus 373 ~~~~~~~i~iwd~~~g-~~~~~l~~~~~~~v~s~~~fspd---------g~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 373 TPYELRTIDVFDGNSG-KMMCQLYDPESSGISSLNEFNPM---------GDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp STTCCCCEEEECSSSC-CEEEEECCSSCCCCCCEEEECTT---------SSCEEEEC-SSEEEECCCC-----
T ss_pred EecCCCEEEEEECCCC-cEEEEEeCCCCCcEEEEEEECCC---------CCEEEEEc-CCcEEEEECCcCeee
Confidence 247999999887 55554 45788888887 69998 56787765 889999999987653
No 112
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-33 Score=271.82 Aligned_cols=271 Identities=9% Similarity=0.092 Sum_probs=216.0
Q ss_pred EEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECC---------CCce
Q 038802 57 IVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVK---------SRTP 127 (532)
Q Consensus 57 i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~---------~~~~ 127 (532)
..+.+++.++++|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++|+.|++|++|+.. +++.
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 3455678899999999999999999998887776 467888889888 9999999999999665 4554
Q ss_pred EEEec-CCCCCEEEEEeecC-CCcEEEEEeCCCeEEEEECCCCeEEEecc-CCCCceEEEEEeCCCCCEEEEEeCCCeEE
Q 038802 128 LRRLK-SHTRPVRFVKYPFL-DKLHLVSGGDDGIVKFWDVAGESVVLDLF-GHKDYVRCGDCSPVNGDMFVTGSYDHTVK 204 (532)
Q Consensus 128 ~~~~~-~h~~~i~~~~~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~l~s~s~dg~i~ 204 (532)
+..+. +|.++|.+++|+|. ++.++++|+.||+|++||+++++...... .|...+.+++|+| ++.+|++|+.||.|+
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK-DSLLLALYSPDGILD 195 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT-TSCEEEEECTTSCEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC-CCCEEEEEcCCCEEE
Confidence 55444 67789999999972 56789999999999999999998876663 4566899999999 999999999999999
Q ss_pred EEEcccCCce-eEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEccC---CCcceE--EEEEeccCCC
Q 038802 205 LWDVRVENSK-SVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMES---HNKTVT--SVCVGRVGNE 278 (532)
Q Consensus 205 iwd~~~~~~~-~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~i~--~~~~~~~~~~ 278 (532)
+||++++... ..+...|..+|.+++|+|++.+|++++++.|++||+++. ..+..+.. |...+. +++|+|+
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--- 271 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKD-VGTLAYPTYTIPEFKTGTVTYDIDDS--- 271 (343)
T ss_dssp EEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSS-TTCBSSCCCBC-----CCEEEEECTT---
T ss_pred EEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCC-CcceeecccccccccccceEEEECCC---
Confidence 9999987766 444434899999999999999999999779999999876 44333332 334443 6999999
Q ss_pred CCccccccEEEEEec-CCeEEEEECCCceEEEeeecCCCeeEEEEec---CCCEEEEEecCCcEEEEeecCc
Q 038802 279 SGEEAMQYRILSVAL-DGYMKVFDYGKMKVTHSMRFPAPLMSVAFSP---DCMTRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 279 ~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~g~~dg~i~iw~~~~~ 346 (532)
+.++++++. |+.+++|++.+....... .++..++|++ ++..+++++.||.+.++-....
T Consensus 272 ------g~~l~~~s~~d~~i~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~ 334 (343)
T 3lrv_A 272 ------GKNMIAYSNESNSLTIYKFDKKTKNWTK---DEESALCLQSDTADFTDMDVVCGDGGIAAILKTND 334 (343)
T ss_dssp ------SSEEEEEETTTTEEEEEEECTTTCSEEE---EEEEECCC----CCCCEEEEEEETTEEEEEEECSS
T ss_pred ------CCEEEEecCCCCcEEEEEEcccccceEe---cCceeEecCccccccceeEEEecCCceEEEEecCC
Confidence 678999888 999999998654322221 5677888998 8899999999999998865443
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-32 Score=265.48 Aligned_cols=245 Identities=16% Similarity=0.122 Sum_probs=209.8
Q ss_pred EeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCc---eEEEecCCCCCEEEEEeecCCCc-EEEEEeCCCeEEEE
Q 038802 88 AISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRT---PLRRLKSHTRPVRFVKYPFLDKL-HLVSGGDDGIVKFW 163 (532)
Q Consensus 88 ~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~---~~~~~~~h~~~i~~~~~~~~~~~-~l~s~s~dg~i~iw 163 (532)
...+|.+.|++++|+|++++|++|+.||.|++||+.++. ....+.+|...|.+++|+| ++. ++++|+.||.|++|
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID-NTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEE-SSSEEEEEEETTSCEEEE
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECC-CCCcEEEEEcCCCeEEEE
Confidence 345799999999999999999999999999999998876 3455568999999999999 888 99999999999999
Q ss_pred EC-CCCeEEEeccC--CCCceEEEEEeCCCCCEEEEEeCCCeEEEEEccc---------CCceeEEEecCCCcEEEEEEe
Q 038802 164 DV-AGESVVLDLFG--HKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRV---------ENSKSVMEVNHGKPIEDVMFL 231 (532)
Q Consensus 164 d~-~~~~~~~~~~~--~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~---------~~~~~~~~~~~~~~v~~i~~~ 231 (532)
|+ .+++. ..+.+ |...|.+++|+| ++.+++++.|+.|++||+++ .+.... ..|...|.+++|+
T Consensus 85 d~~~~~~~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~ 159 (342)
T 1yfq_A 85 DLIGSPSF-QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN--TKVKNKIFTMDTN 159 (342)
T ss_dssp CSSSSSSE-EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS--SSSCCCEEEEEEC
T ss_pred EeccCCce-EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeE--EeeCCceEEEEec
Confidence 99 87755 67788 999999999998 88999999999999999987 443333 3488899999999
Q ss_pred cCCCEEEEEc-CCeEEEEEccC-CCe-eeEEccCCCcceEEEEEec-cCCCCCccccccEEEEEecCCeEEEEECCCc--
Q 038802 232 PSGGLIATAG-GNSVKIWDLIG-GGK-MVYSMESHNKTVTSVCVGR-VGNESGEEAMQYRILSVALDGYMKVFDYGKM-- 305 (532)
Q Consensus 232 ~~~~~l~~~~-d~~i~iwd~~~-~~~-~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-- 305 (532)
|++ +++++ ++.|++||+++ ... .......|...+.+++|+| + +.++++++.||.|++|++...
T Consensus 160 ~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~---------~~~l~~~~~dg~i~i~~~~~~~~ 228 (342)
T 1yfq_A 160 SSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE---------QEGYACSSIDGRVAVEFFDDQGD 228 (342)
T ss_dssp SSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGG---------GCEEEEEETTSEEEEEECCTTCC
T ss_pred CCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCC---------CCEEEEEecCCcEEEEEEcCCCc
Confidence 987 55555 99999999987 432 3344557888999999999 8 679999999999999999876
Q ss_pred ----eEEEeee-cCC---------CeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 306 ----KVTHSMR-FPA---------PLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 306 ----~~~~~~~-~~~---------~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+....+. +.. +|.+++|+|++++|++|+.||.|++|++.+++..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp STTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred ccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 5556665 433 8999999999999999999999999999887654
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=5.3e-33 Score=273.79 Aligned_cols=244 Identities=14% Similarity=0.164 Sum_probs=177.0
Q ss_pred EEEccCCCEEEEEcCCCCEEEEECCCCceEE-----EecCCCCCEEEEEeec-------CCCcEEEEEeCCCeEEEEECC
Q 038802 99 SSFRPDGSLLAASDLSGLIQVFDVKSRTPLR-----RLKSHTRPVRFVKYPF-------LDKLHLVSGGDDGIVKFWDVA 166 (532)
Q Consensus 99 ~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~-----~~~~h~~~i~~~~~~~-------~~~~~l~s~s~dg~i~iwd~~ 166 (532)
..+.+++.+|++|+.|++|++||..++.... .+.+|.+.|++++|+| .++.+|++||.|++|++||+.
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 3344566789999999999999998876433 3678999999999986 267899999999999999999
Q ss_pred CCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEE------------------------EecCC
Q 038802 167 GESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVM------------------------EVNHG 222 (532)
Q Consensus 167 ~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~------------------------~~~~~ 222 (532)
++.++..+..|...|.+++|+|.++.+|++|+.||+|++||++++...... ...|.
T Consensus 175 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 254 (393)
T 4gq1_A 175 DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA 254 (393)
T ss_dssp TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCS
T ss_pred CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccc
Confidence 998888888899999999999944468999999999999999875432211 12467
Q ss_pred CcEEEEEEe-cCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCC-----------CccccccEEE
Q 038802 223 KPIEDVMFL-PSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNES-----------GEEAMQYRIL 289 (532)
Q Consensus 223 ~~v~~i~~~-~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----------~~~~~~~~l~ 289 (532)
..+.++.|+ |++..+++++ |+.+++||+... .....+..|...+..+.+.|+.... .....+.+++
T Consensus 255 ~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
T 4gq1_A 255 SSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN-NDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFAT 333 (393)
T ss_dssp SSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEE
T ss_pred ccceeeeeecCCCCEEEEEeCCCCEEEEECccC-CCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEE
Confidence 788899987 7999999998 899999999876 5555566666666555554432100 0001245778
Q ss_pred EEecCCeEEEEECCCceEEEee-ecCCCeeEEEEecCCCEEEEEecCCcEEEEeec
Q 038802 290 SVALDGYMKVFDYGKMKVTHSM-RFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRK 344 (532)
Q Consensus 290 s~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~ 344 (532)
+|+.||.|++||+.+++..... .+..+|.+++|+|||++||+++.+| +.+|++.
T Consensus 334 sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 334 AHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 8889999999999988766554 4888999999999999999998766 6666553
No 115
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.2e-32 Score=264.39 Aligned_cols=243 Identities=13% Similarity=0.133 Sum_probs=195.1
Q ss_pred ccCccccCeeEEEEcCCCCeEEEEE-----------eCCeEEEEeCCCceEEE----Ee-----eccCceeEEEEEccCC
Q 038802 46 QIPGLVSSINSIVFSPTTSHLFAAT-----------HSASLTLFSSQTLEKHS----AI-----SSFKDVVTCSSFRPDG 105 (532)
Q Consensus 46 ~~~~h~~~V~~i~~sp~~~~l~~~~-----------~d~~v~i~~~~~~~~~~----~~-----~~~~~~v~~~~~~~~~ 105 (532)
.+.+|.+.|.++++++ +.+++|. .|+.+++|++.+..... .. ..+...+.+++|+|||
T Consensus 68 ~l~~~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 68 ALEDNDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp ECCTTSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred EccCCCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 3578888999988764 4666654 46789999876543211 11 1234568999999999
Q ss_pred CEEEEE--cCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEE--eccCCCCce
Q 038802 106 SLLAAS--DLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVL--DLFGHKDYV 181 (532)
Q Consensus 106 ~~l~~g--~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~--~~~~~~~~v 181 (532)
++++++ +.|++|+|||+.+++++..+. |.+.|.+++|+| ++.++++++.|+ +.+|+..+++.+. ....|...|
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fsp-dg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v 222 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFST-DGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSL 222 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECT-TSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEE
T ss_pred CEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEcc-CCceEEecccee-EEEEEeccCcceeeeecCCCCCCE
Confidence 998754 468999999999999988886 788899999999 999999998654 5666666665543 346789999
Q ss_pred EEEEEeCCCCCEEEEEeCCC----eEEEEEcccCCceeE---EEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCC
Q 038802 182 RCGDCSPVNGDMFVTGSYDH----TVKLWDVRVENSKSV---MEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGG 253 (532)
Q Consensus 182 ~~i~~~~~~~~~l~s~s~dg----~i~iwd~~~~~~~~~---~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~ 253 (532)
.+++|+| ++..+++++.|+ .+++||+........ ....|..+|++++|+|+|++|++++ |++|+|||+.++
T Consensus 223 ~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 223 SKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 9999999 999999999887 688899876433221 2336889999999999999999999 999999999987
Q ss_pred CeeeEE-ccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 254 GKMVYS-MESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 254 ~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
+++.. +.+|...|++++|+|+ +.+|++||.|++|+|||+..
T Consensus 302 -~~~~~~~~gH~~~V~~v~fSpd---------g~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 302 -SMSKIFKQAHSFAITEVTISPD---------STYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp -EEEEEETTSSSSCEEEEEECTT---------SCEEEEEETTSEEEEEECCT
T ss_pred -cEEEEecCcccCCEEEEEECCC---------CCEEEEEeCCCeEEEEEcCC
Confidence 66665 5799999999999999 68999999999999999864
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=4.2e-30 Score=253.21 Aligned_cols=267 Identities=13% Similarity=0.147 Sum_probs=223.2
Q ss_pred eEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEE-EEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEe
Q 038802 65 HLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLL-AASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKY 143 (532)
Q Consensus 65 ~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~ 143 (532)
.+++++.|+.|++||..+++....+..|. .+.+++|+|+++++ ++++.|+.|++||+.+++.+..+..+. .+.+++|
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~ 81 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAV 81 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEE
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEE
Confidence 56777889999999999999998888765 48999999999977 677789999999999999988887655 8999999
Q ss_pred ecCCCcEEE-EEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEE-EEEeCCCeEEEEEcccCCceeEEEecC
Q 038802 144 PFLDKLHLV-SGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMF-VTGSYDHTVKLWDVRVENSKSVMEVNH 221 (532)
Q Consensus 144 ~~~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~ 221 (532)
+| ++.+++ +++.++.|++||+.+++.+..+..+ ..+.+++|+| +++.+ ++++.|+.|++||+.+++..... ..
T Consensus 82 sp-dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~--~~ 156 (391)
T 1l0q_A 82 SP-DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVINTV--SV 156 (391)
T ss_dssp CT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEE--EC
T ss_pred CC-CCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEE--ec
Confidence 99 777664 5557799999999999988877754 4688999999 88766 78888999999999885544433 44
Q ss_pred CCcEEEEEEecCCCEE-EEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEe---cCCe
Q 038802 222 GKPIEDVMFLPSGGLI-ATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVA---LDGY 296 (532)
Q Consensus 222 ~~~v~~i~~~~~~~~l-~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~---~dg~ 296 (532)
...+.+++|+|+++.+ ++++ ++.|++||+.++ .....+. +...+.+++|+|+ +.++++++ .++.
T Consensus 157 ~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~-~~~~~~~~~~~~~---------g~~l~~~~~~~~~~~ 225 (391)
T 1l0q_A 157 GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN-SVIDTVK-VEAAPSGIAVNPE---------GTKAYVTNVDKYFNT 225 (391)
T ss_dssp CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEE-CSSEEEEEEECTT---------SSEEEEEEECSSCCE
T ss_pred CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-eEEEEEe-cCCCccceEECCC---------CCEEEEEecCcCCCc
Confidence 5677999999999877 4555 789999999887 6666554 4567899999999 56677776 6899
Q ss_pred EEEEECCCceEEEeeecCCCeeEEEEecCCCEE-EEEecCCcEEEEeecCcccc
Q 038802 297 MKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTR-VIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 297 i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~g~~dg~i~iw~~~~~~~~ 349 (532)
|++||+.+++.+..+.....+.+++|+|+|+++ ++++.||.|++|+..+++..
T Consensus 226 v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 226 VSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTIT 279 (391)
T ss_dssp EEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEE
Confidence 999999999999988877788999999999987 56788999999999987644
No 117
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.1e-30 Score=252.70 Aligned_cols=261 Identities=18% Similarity=0.268 Sum_probs=210.0
Q ss_pred EEeCCCceEEEEeeccCceeEEEEEccC---CCEEEEEcCCCCEEEEECCC-CceE-EEecCCCCCEEEEEeecCCCcEE
Q 038802 77 LFSSQTLEKHSAISSFKDVVTCSSFRPD---GSLLAASDLSGLIQVFDVKS-RTPL-RRLKSHTRPVRFVKYPFLDKLHL 151 (532)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~g~~dg~i~iwd~~~-~~~~-~~~~~h~~~i~~~~~~~~~~~~l 151 (532)
.++....+.+..+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+ +..+ ..+.+|...|.+++|+| ++.+|
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l 101 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-DGSKV 101 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECT-TSSEE
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECc-CCCEE
Confidence 3455667778888999999999999999 69999999999999999987 5544 77889999999999999 99999
Q ss_pred EEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEE--eCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEE
Q 038802 152 VSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDC--SPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVM 229 (532)
Q Consensus 152 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~--~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~ 229 (532)
++++.||.|++||+.+++.+. +..|...|.+++| +| ++.+|++++.||.|++||+++++....+. ....+.++.
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~~ 177 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQ--LPERCYCAD 177 (368)
T ss_dssp EEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEE--CSSCEEEEE
T ss_pred EEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEe--cCCCceEEE
Confidence 999999999999999998776 5669999999999 77 88899999999999999999876655554 345677777
Q ss_pred EecCCCEEEEEc-CCeEEEEEccCCCeeeEEcc-CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc--
Q 038802 230 FLPSGGLIATAG-GNSVKIWDLIGGGKMVYSME-SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM-- 305 (532)
Q Consensus 230 ~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-- 305 (532)
+.++ .+++++ ++.+.+|++........... .+...+.++.+.++... ....+++++.||.|++||+...
T Consensus 178 ~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dg~i~i~~~~~~~~ 250 (368)
T 3mmy_A 178 VIYP--MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQN-----KPTGFALGSIEGRVAIHYINPPNP 250 (368)
T ss_dssp EETT--EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTS-----CEEEEEEEETTSEEEEEESSCSCH
T ss_pred ecCC--eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCC-----CCCeEEEecCCCcEEEEecCCCCc
Confidence 7643 444444 89999999987655444443 34445666666655310 1234999999999999999876
Q ss_pred -eEEEeee-cCC------------CeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 306 -KVTHSMR-FPA------------PLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 306 -~~~~~~~-~~~------------~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
.....+. |.. +|++++|+|++++|++|+.||.|++|++.+.+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred cccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence 3344444 222 6999999999999999999999999999987654
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=5.2e-29 Score=245.32 Aligned_cols=301 Identities=15% Similarity=0.145 Sum_probs=233.5
Q ss_pred CCCCCcccccccCCCcc--CccccCeeEEEEcCCCCeEE-EEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCE
Q 038802 31 SQTPESKYWSSFKPHQI--PGLVSSINSIVFSPTTSHLF-AATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSL 107 (532)
Q Consensus 31 ~~~~~~~~w~~~~~~~~--~~h~~~V~~i~~sp~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 107 (532)
+.++.+++|+.-....+ ..+...+.+++|+|++++++ +++.++.|++||..+++....+..+. .+.+++|+|++++
T Consensus 9 ~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~ 87 (391)
T 1l0q_A 9 SESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQ 87 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSE
T ss_pred CCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCE
Confidence 35677889986544332 22345689999999999874 55589999999999999988887655 8999999999998
Q ss_pred EE-EEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEE-EEEeCCCeEEEEECCCCeEEEeccCCCCceEEEE
Q 038802 108 LA-ASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHL-VSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGD 185 (532)
Q Consensus 108 l~-~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~ 185 (532)
|+ +++.++.|++||+.+++.+..+..| ..+.+++|+| ++..+ ++++.|+.|++||+.+++.+..+..+. .+.+++
T Consensus 88 l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~ 164 (391)
T 1l0q_A 88 VYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIA 164 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEE
T ss_pred EEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEE
Confidence 86 5556799999999999988887754 5689999999 77766 788889999999999999888887654 568999
Q ss_pred EeCCCCCEE-EEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc----CCeEEEEEccCCCeeeEEc
Q 038802 186 CSPVNGDMF-VTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG----GNSVKIWDLIGGGKMVYSM 260 (532)
Q Consensus 186 ~~~~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~----d~~i~iwd~~~~~~~~~~~ 260 (532)
|+| +++.+ ++++.|+.|++||+++++. .....+...+.+++|+|+++++++++ ++.|++||+.++ +.+..+
T Consensus 165 ~~~-dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~-~~~~~~ 240 (391)
T 1l0q_A 165 VTP-DGTKVYVANFDSMSISVIDTVTNSV--IDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN-KITARI 240 (391)
T ss_dssp ECT-TSSEEEEEETTTTEEEEEETTTTEE--EEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT-EEEEEE
T ss_pred ECC-CCCEEEEEeCCCCEEEEEECCCCeE--EEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC-eEEEEE
Confidence 999 77766 6778899999999988543 33445677899999999999887774 689999999877 777777
Q ss_pred cCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecC-CCee---EEE------------Eec
Q 038802 261 ESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFP-APLM---SVA------------FSP 324 (532)
Q Consensus 261 ~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~---~~~------------~s~ 324 (532)
..|. .+.+++|+|++ ..++++++.|+.|++||+.+++.+..+... .+.. .+. |+.
T Consensus 241 ~~~~-~~~~~~~s~dg--------~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~ 311 (391)
T 1l0q_A 241 PVGP-DPAGIAVTPDG--------KKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKS 311 (391)
T ss_dssp ECCS-SEEEEEECTTS--------SEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEE
T ss_pred ecCC-CccEEEEccCC--------CEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeeccccccccccccccc
Confidence 7665 47899999994 334477788999999999999998877622 2210 122 222
Q ss_pred CC----------CEEEEEecCCcEEEEeecCccc
Q 038802 325 DC----------MTRVIGTSNGTIFAGRRKKKEN 348 (532)
Q Consensus 325 ~~----------~~l~~g~~dg~i~iw~~~~~~~ 348 (532)
+. ..+...+.|...++|++..+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~ 345 (391)
T 1l0q_A 312 NITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSS 345 (391)
T ss_dssp SCCSSEEETTCCEEEEECCBSCSEEEEECSSSCE
T ss_pred ccccccccccceEEEEeCCCCceEEEEECCCCcc
Confidence 21 2355566788899999976643
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=3e-30 Score=250.42 Aligned_cols=247 Identities=16% Similarity=0.130 Sum_probs=188.9
Q ss_pred EEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEE-EEEe
Q 038802 77 LFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHL-VSGG 155 (532)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l-~s~s 155 (532)
||++.+...+.....|.+.|++++|+|||++|++|+.+| +++||+.+++.......+ .+..+++.+ +++.+ ++++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~ 78 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLH-RTNYVAFVTG 78 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECT-TSSEEEEECS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcC-CCCEEEEEEC
Confidence 466666677777788999999999999999999998775 789999887666554322 477788887 55555 6788
Q ss_pred CCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccC-CceeEEEecCCCcEEEEEEecCC
Q 038802 156 DDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVE-NSKSVMEVNHGKPIEDVMFLPSG 234 (532)
Q Consensus 156 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~i~~~~~~ 234 (532)
.|++|++||+.+++.+..+. +...|.++.+++ + .++++ .|+.|++||+.+. +....+.. +...+++++
T Consensus 79 ~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~-~--~~~~~-~~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~-- 147 (355)
T 3vu4_A 79 VKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSR-E--FIVVS-YGDVISVFKFGNPWKRITDDIR----FGGVCEFSN-- 147 (355)
T ss_dssp STTEEEEEETTTTEEEEEEE-CSSCEEEEEECS-S--EEEEE-ETTEEEEEESSTTCCBSSCCEE----EEEEEEEET--
T ss_pred CccEEEEEECCCCcEEEEEE-CCCceEEEEEcC-C--EEEEE-EcCEEEEEECCCCceeeEEecc----CCceEEEEc--
Confidence 88999999999999988886 677999999987 3 44444 4789999999886 44433332 455567777
Q ss_pred CEEEEE--c-CCeEEEEEccCCC--------------ee-eEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCe
Q 038802 235 GLIATA--G-GNSVKIWDLIGGG--------------KM-VYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGY 296 (532)
Q Consensus 235 ~~l~~~--~-d~~i~iwd~~~~~--------------~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~ 296 (532)
.+++.+ + +|.|++||+.++. .+ +..+.+|...|++++|+|+ +.+|++|+.||+
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~---------g~~l~s~s~d~~ 218 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK---------SDMVATCSQDGT 218 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT---------SSEEEEEETTCS
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC---------CCEEEEEeCCCC
Confidence 566654 4 8999999998753 12 6788999999999999998 689999999998
Q ss_pred -EEEEECCCceEEEeee---cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcc
Q 038802 297 -MKVFDYGKMKVTHSMR---FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKE 347 (532)
Q Consensus 297 -i~iwd~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~ 347 (532)
|++||+.+++++..+. |..+|++++|+|+|++|++|+.||.|++|++....
T Consensus 219 ~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 219 IIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred EEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 9999999999999997 88999999999999999999999999999998764
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.6e-30 Score=258.52 Aligned_cols=237 Identities=16% Similarity=0.121 Sum_probs=202.9
Q ss_pred CceeEEEEEccCCCEEEEEcCCCCEEEEECCCCc---eEEEecC------------------------------------
Q 038802 93 KDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRT---PLRRLKS------------------------------------ 133 (532)
Q Consensus 93 ~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~---~~~~~~~------------------------------------ 133 (532)
..++.+++|+|+|++|++++ ++.|++||+.+++ .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~~-~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAII-KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEEE-TTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEEe-CCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 35789999999999777665 7899999999888 5555543
Q ss_pred ------------------CCCCEEEEEeecCCCcEE-EEEeCCCeEEEEECC--CCeEEEecc--CCCCceEEEEEeCCC
Q 038802 134 ------------------HTRPVRFVKYPFLDKLHL-VSGGDDGIVKFWDVA--GESVVLDLF--GHKDYVRCGDCSPVN 190 (532)
Q Consensus 134 ------------------h~~~i~~~~~~~~~~~~l-~s~s~dg~i~iwd~~--~~~~~~~~~--~~~~~v~~i~~~~~~ 190 (532)
|.+.|.+++|+| ++.+| ++|+.||.|++||+. +++.+..+. .|...|.+++|+| +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~ 160 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-D 160 (450)
T ss_dssp -----------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-T
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-C
Confidence 334799999999 78875 899999999999999 888877775 5778999999999 9
Q ss_pred CCEEEEEeCCCeEEEEEcccCCcee---EEEecCCCcEEEEEEecC---CCEEEEEc-CCeEEEEEccCCCeeeEE-ccC
Q 038802 191 GDMFVTGSYDHTVKLWDVRVENSKS---VMEVNHGKPIEDVMFLPS---GGLIATAG-GNSVKIWDLIGGGKMVYS-MES 262 (532)
Q Consensus 191 ~~~l~s~s~dg~i~iwd~~~~~~~~---~~~~~~~~~v~~i~~~~~---~~~l~~~~-d~~i~iwd~~~~~~~~~~-~~~ 262 (532)
+.+|++|+.||.|++|++.+..... .....|...|.+++|+|+ +.+|++++ |+.|++||+.++ ..+.. +.+
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~-~~~~~~~~~ 239 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC-FIVDKWLFG 239 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT-TCEEEECCC
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC-ceeeeeecC
Confidence 9999999999999999998765432 122368899999999999 98999998 899999999887 44544 678
Q ss_pred CCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeec--------------------------CCC
Q 038802 263 HNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRF--------------------------PAP 316 (532)
Q Consensus 263 ~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------------------------~~~ 316 (532)
|...|.+++|+ + +.+|++++.|+.|++||+.+++++..+.. ...
T Consensus 240 h~~~v~~~~~s-d---------~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (450)
T 2vdu_B 240 HKHFVSSICCG-K---------DYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFA 309 (450)
T ss_dssp CSSCEEEEEEC-S---------TTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCC
T ss_pred CCCceEEEEEC-C---------CCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEE
Confidence 99999999999 7 68999999999999999999998887752 246
Q ss_pred eeEEEEecCCCEEEEEe-cCCcEEEEee
Q 038802 317 LMSVAFSPDCMTRVIGT-SNGTIFAGRR 343 (532)
Q Consensus 317 v~~~~~s~~~~~l~~g~-~dg~i~iw~~ 343 (532)
|.+++|+|+++++++++ .|+.|++|++
T Consensus 310 v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 310 VSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 88999999999999999 8999999999
No 121
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.9e-30 Score=250.66 Aligned_cols=269 Identities=16% Similarity=0.150 Sum_probs=202.4
Q ss_pred CCCCCCcccccccCC-------CccCccccCeeEEEEcC--CCCeEEEEEeCCeEEEEeCCCc---------eEEEEeec
Q 038802 30 LSQTPESKYWSSFKP-------HQIPGLVSSINSIVFSP--TTSHLFAATHSASLTLFSSQTL---------EKHSAISS 91 (532)
Q Consensus 30 ~~~~~~~~~w~~~~~-------~~~~~h~~~V~~i~~sp--~~~~l~~~~~d~~v~i~~~~~~---------~~~~~~~~ 91 (532)
...++.+++|+.-.. ..+.+|.++|++++|+| ++.+|++++.||.|++||+.++ +....+..
T Consensus 29 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 108 (351)
T 3f3f_A 29 CSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLND 108 (351)
T ss_dssp EETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECC
T ss_pred eeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecc
Confidence 457789999986543 22468999999999999 6899999999999999999876 56788889
Q ss_pred cCceeEEEEEccC--CCEEEEEcCCCCEEEEECCCCceEEEec-------------CCCCCEEEEEeecC--CCcEEEEE
Q 038802 92 FKDVVTCSSFRPD--GSLLAASDLSGLIQVFDVKSRTPLRRLK-------------SHTRPVRFVKYPFL--DKLHLVSG 154 (532)
Q Consensus 92 ~~~~v~~~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~-------------~h~~~i~~~~~~~~--~~~~l~s~ 154 (532)
|...|.+++|+|+ +.+|++|+.||.|++||+.+++.+..+. .|...+.+++|+|. ++..++++
T Consensus 109 ~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~ 188 (351)
T 3f3f_A 109 SKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVS 188 (351)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEE
T ss_pred cCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEe
Confidence 9999999999999 9999999999999999998776543332 68889999999993 38899999
Q ss_pred eCCCeEEEEECCCCeE--EEeccCCCCceEEEEEeCCCC----CEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEE
Q 038802 155 GDDGIVKFWDVAGESV--VLDLFGHKDYVRCGDCSPVNG----DMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDV 228 (532)
Q Consensus 155 s~dg~i~iwd~~~~~~--~~~~~~~~~~v~~i~~~~~~~----~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i 228 (532)
+.|+.+.+|+...++. +..+.+|...|++++|+| ++ ++|++|+.||.|++||++......... .+...+...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p-~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~ 266 (351)
T 3f3f_A 189 ALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP-SIGRWYQLIATGCKDGRIRIFKITEKLSPLASE-ESLTNSNMF 266 (351)
T ss_dssp ETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC-CSSCSSEEEEEEETTSCEEEEEEEECC----------------
T ss_pred cCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC-CCCCcceEEEEEcCCCeEEEEeCCCCcCccccC-Ccccceecc
Confidence 9999999998887765 677889999999999999 76 799999999999999998754433222 223333344
Q ss_pred EEecCCCEEEEEc-----CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECC
Q 038802 229 MFLPSGGLIATAG-----GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYG 303 (532)
Q Consensus 229 ~~~~~~~~l~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 303 (532)
..++....+..+. ...+.+|+.... ..+..+.+|...|++++|+|+ +.+|++++.||.|++||+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~s~~---------~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 267 DNSADVDMDAQGRSDSNTEEKAELQSNLQV-ELLSEHDDHNGEVWSVSWNLT---------GTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp ------------------------CCSEEE-EEEEEECTTSSCEEEEEECSS---------SCCEEEEETTSCEEEEEEC
T ss_pred CCCcccccccccccccccceeeeecccccc-cEEEEEecccccEEEEEEcCC---------CCEEEEecCCCcEEEEecC
Confidence 4444444444443 235566665554 678888999999999999998 6789999999999999999
Q ss_pred CceEEEe
Q 038802 304 KMKVTHS 310 (532)
Q Consensus 304 ~~~~~~~ 310 (532)
+++....
T Consensus 337 ~~~~~~~ 343 (351)
T 3f3f_A 337 YSNEFKC 343 (351)
T ss_dssp TTSCEEE
T ss_pred cCcchhh
Confidence 8654443
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.6e-29 Score=234.51 Aligned_cols=274 Identities=12% Similarity=0.064 Sum_probs=190.9
Q ss_pred CeeEEEEcCCCC---eEEEEEeCCeEEEEeCCCc---eEEEEeeccCceeEEEEEccCCCEEE-EEcCCCCE-EEEEC--
Q 038802 53 SINSIVFSPTTS---HLFAATHSASLTLFSSQTL---EKHSAISSFKDVVTCSSFRPDGSLLA-ASDLSGLI-QVFDV-- 122 (532)
Q Consensus 53 ~V~~i~~sp~~~---~l~~~~~d~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i-~iwd~-- 122 (532)
.+.++.|-..+- .+++++ ...|++|+..++ +..+++..|..+|..+.+.||..-|+ ++-.+=.+ .++-+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EEeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 456666644432 344444 689999999988 88999999999999999988654333 22111111 11111
Q ss_pred CCC----ceEEEecCCCCCEEEEEeecCCCcEEEEEe--CCCeEEEEEC-CCCeEEEeccCCCCceEEEEEeCC--CCCE
Q 038802 123 KSR----TPLRRLKSHTRPVRFVKYPFLDKLHLVSGG--DDGIVKFWDV-AGESVVLDLFGHKDYVRCGDCSPV--NGDM 193 (532)
Q Consensus 123 ~~~----~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s--~dg~i~iwd~-~~~~~~~~~~~~~~~v~~i~~~~~--~~~~ 193 (532)
... .....-.+|...|..+ + +++.+.+++ .|+.|++|++ .+++.+..+.+|...++.++|+|. ++..
T Consensus 120 spd~~~~~~~l~s~g~~~~v~~l---~-~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~ 195 (356)
T 2w18_A 120 SSDDESEKQVLLKSGNIKAVLGL---T-KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEA 195 (356)
T ss_dssp ------CCEEEEEEEEEEEEEEE---T-TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTE
T ss_pred CCCccccccEEEeCCCeEEEEec---C-CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCce
Confidence 111 1111112344334433 3 565555543 5999999999 558888888889999988888873 5689
Q ss_pred EEEEeCCCeEEEEEcccCCceeEEEecC--CCcEEEEEEecCCCEE------------EEEc-CCeEEEEEccCCCeeeE
Q 038802 194 FVTGSYDHTVKLWDVRVENSKSVMEVNH--GKPIEDVMFLPSGGLI------------ATAG-GNSVKIWDLIGGGKMVY 258 (532)
Q Consensus 194 l~s~s~dg~i~iwd~~~~~~~~~~~~~~--~~~v~~i~~~~~~~~l------------~~~~-d~~i~iwd~~~~~~~~~ 258 (532)
|++|+.|++|++||+++++....+...+ ...+.+++|+|+|.++ ++++ |++|++||..++ +.+.
T Consensus 196 LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg-k~l~ 274 (356)
T 2w18_A 196 LLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT-LSVG 274 (356)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT-EEEE
T ss_pred EEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC-EEEE
Confidence 9999999999999999987777765322 3467788999999987 4455 789999999877 6554
Q ss_pred Ec-----cCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCe-eEEEEecCCCEEEE
Q 038802 259 SM-----ESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPL-MSVAFSPDCMTRVI 331 (532)
Q Consensus 259 ~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v-~~~~~s~~~~~l~~ 331 (532)
.+ .+|...+.+..++ +.++++++.||+|+|||+.+++++.++. |...+ .+++|+|||++|++
T Consensus 275 v~~~~~p~Gh~~~~lsg~~s-----------g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaS 343 (356)
T 2w18_A 275 VMLYCLPPGQAGRFLEGDVK-----------DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLA 343 (356)
T ss_dssp EEEECCCTTCCCCEEEEEEE-----------TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEE
T ss_pred EEEeeccCCCcceeEccccC-----------CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEE
Confidence 43 3666554433333 4579999999999999999999999997 55554 46899999999999
Q ss_pred EecCCcEEEEee
Q 038802 332 GTSNGTIFAGRR 343 (532)
Q Consensus 332 g~~dg~i~iw~~ 343 (532)
|+.|++|+||++
T Consensus 344 GS~D~TIklWd~ 355 (356)
T 2w18_A 344 GQKDGNIFVYHY 355 (356)
T ss_dssp ECTTSCEEEEEE
T ss_pred EECCCcEEEecC
Confidence 999999999986
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.1e-31 Score=254.35 Aligned_cols=233 Identities=11% Similarity=0.057 Sum_probs=190.6
Q ss_pred EEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECC---------CCeE
Q 038802 100 SFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVA---------GESV 170 (532)
Q Consensus 100 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~---------~~~~ 170 (532)
.+.+++.++++|+.||+|++||+.+++.+..+. ...|.++.|+| + +++++.|++|++|+.. +++.
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 445688899999999999999999998888776 56677888887 4 9999999999999765 4444
Q ss_pred EEec-cCCCCceEEEEEeCC-CCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEE
Q 038802 171 VLDL-FGHKDYVRCGDCSPV-NGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKI 247 (532)
Q Consensus 171 ~~~~-~~~~~~v~~i~~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~i 247 (532)
+..+ .+|.+.|.+++|+|. +++++++|+.||+|++||+++++........+...+.+++|+|++.++++|+ |+.|++
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 4444 367789999999982 5789999999999999999987765555456677899999999999999988 999999
Q ss_pred EEccCCCeeeEEccC-CCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee----cCCCe--eEE
Q 038802 248 WDLIGGGKMVYSMES-HNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR----FPAPL--MSV 320 (532)
Q Consensus 248 wd~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~v--~~~ 320 (532)
||++++......+.. |...|++++|+|+ +.+|++++ |+.|++||+++++....+. +..++ .++
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~---------g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADN---------GYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTY 266 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTT---------SSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEE
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCC---------CCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEE
Confidence 999988444377777 9999999999999 67899999 5599999999887655443 22333 369
Q ss_pred EEecCCCEEEEEec-CCcEEEEeecCccc
Q 038802 321 AFSPDCMTRVIGTS-NGTIFAGRRKKKEN 348 (532)
Q Consensus 321 ~~s~~~~~l~~g~~-dg~i~iw~~~~~~~ 348 (532)
+|+|+|++|++++. |+.|++|++.+..+
T Consensus 267 ~~~~~g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 267 DIDDSGKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred EECCCCCEEEEecCCCCcEEEEEEccccc
Confidence 99999999999998 99999999976543
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=7e-29 Score=247.92 Aligned_cols=285 Identities=12% Similarity=0.106 Sum_probs=231.4
Q ss_pred cccCeeEEE---EcCCCCeEEEEEeC--------------C--eEEEEeCCCc--eEEEEeeccCceeEEEEEccCCCEE
Q 038802 50 LVSSINSIV---FSPTTSHLFAATHS--------------A--SLTLFSSQTL--EKHSAISSFKDVVTCSSFRPDGSLL 108 (532)
Q Consensus 50 h~~~V~~i~---~sp~~~~l~~~~~d--------------~--~v~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l 108 (532)
....+..++ |+|++..+++.+.. + .|..+|..++ +....+..+ ..+.+++|+|++.++
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~ 137 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLA 137 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEE
Confidence 345677888 89988776654421 2 4455555434 555555554 445699999988888
Q ss_pred EEEcCCCCEEEEECCCCceEE-----EecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEE
Q 038802 109 AASDLSGLIQVFDVKSRTPLR-----RLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRC 183 (532)
Q Consensus 109 ~~g~~dg~i~iwd~~~~~~~~-----~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 183 (532)
++++.++.|++||+.+++... .+.+|.+.|.+++|++ ++.++++++.|+.|++||+++++.+..+..|...+.+
T Consensus 138 ~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~ 216 (433)
T 3bws_A 138 IPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKI 216 (433)
T ss_dssp EEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEE
T ss_pred EEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeE
Confidence 888889999999999998877 4457899999999988 8999999999999999999999999988889999999
Q ss_pred EEEeCCCCCEE-EEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc---------CCeEEEEEccCC
Q 038802 184 GDCSPVNGDMF-VTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG---------GNSVKIWDLIGG 253 (532)
Q Consensus 184 i~~~~~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~---------d~~i~iwd~~~~ 253 (532)
++|+| ++..+ ++++.|+.|++||+++++. .........+.+++|+|+++.+++++ |+.|++||+.++
T Consensus 217 ~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 217 LLYDP-IRDLVYCSNWISEDISVIDRKTKLE--IRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp EEEET-TTTEEEEEETTTTEEEEEETTTTEE--EEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred EEEcC-CCCEEEEEecCCCcEEEEECCCCcE--EEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence 99999 77776 4555899999999987543 33445566799999999999888776 569999999876
Q ss_pred CeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEe
Q 038802 254 GKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGT 333 (532)
Q Consensus 254 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~ 333 (532)
+....+ .|...+.+++|+|++ ..++++++.|+.|++||+.+++....+.+...+.+++|+|+|+++++++
T Consensus 294 -~~~~~~-~~~~~~~~~~~~~~g--------~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 363 (433)
T 3bws_A 294 -KLIDTI-GPPGNKRHIVSGNTE--------NKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSC 363 (433)
T ss_dssp -EEEEEE-EEEECEEEEEECSST--------TEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEE
T ss_pred -cEEeec-cCCCCcceEEECCCC--------CEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEe
Confidence 555544 456688999999985 3566777999999999999999999998888999999999999998887
Q ss_pred c---------------CCcEEEEeecCcccc
Q 038802 334 S---------------NGTIFAGRRKKKENV 349 (532)
Q Consensus 334 ~---------------dg~i~iw~~~~~~~~ 349 (532)
. ||.|++|+..+.+..
T Consensus 364 ~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~ 394 (433)
T 3bws_A 364 RGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK 394 (433)
T ss_dssp CCCCCTTTCTTSCCSSCCEEEEEETTTTEEE
T ss_pred cCCCccccccccccccceEEEEEECCCCcEE
Confidence 6 579999999877544
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=8.2e-31 Score=258.13 Aligned_cols=241 Identities=8% Similarity=0.032 Sum_probs=177.0
Q ss_pred cccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEE-----EeeccCceeEEEEEcc--------CCCEEEEEcCCCC
Q 038802 50 LVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHS-----AISSFKDVVTCSSFRP--------DGSLLAASDLSGL 116 (532)
Q Consensus 50 h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~-----~~~~~~~~v~~~~~~~--------~~~~l~~g~~dg~ 116 (532)
|...+....+++++.++++++.|++|+|||..++.... .+.+|.+.|++++|+| |+++||+|+.|++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 33334444455566789999999999999998876533 3578999999999998 8899999999999
Q ss_pred EEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEe-----------------------
Q 038802 117 IQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLD----------------------- 173 (532)
Q Consensus 117 i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~----------------------- 173 (532)
|+|||+.++..+..+..|..+|.+++|+|.+..+|++|+.||+|++||+.+++....
T Consensus 168 v~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 247 (393)
T 4gq1_A 168 LIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNT 247 (393)
T ss_dssp EEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC--
T ss_pred EEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceee
Confidence 999999988888888889999999999994456899999999999999987754322
Q ss_pred --ccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcE------------------EEEEEec-
Q 038802 174 --LFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPI------------------EDVMFLP- 232 (532)
Q Consensus 174 --~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v------------------~~i~~~~- 232 (532)
..+|...+.++.|++.++..+++++.|+++++||+........+. .|...+ ....++|
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEIS-DSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp ----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEe-eecCccccEEEccccccccccCcceeEEEccC
Confidence 235778899999985599999999999999999997654332221 122222 2233443
Q ss_pred -CCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEEC
Q 038802 233 -SGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDY 302 (532)
Q Consensus 233 -~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 302 (532)
++.++++++ ||.|++||+.++ ........|..+|.+++|+|+ +.+|++++.+| +.+|.+
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~-~~~~~~~~~~~~V~svafspd---------G~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEK-DSNSIPIQLGMPIVDFCWHQD---------GSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCT-TCCEEEEECSSCEEEEEECTT---------SSEEEEEESSE-EEEEEE
T ss_pred CCCEEEEEECCCCEEEEEECCCC-cEEEEecCCCCcEEEEEEcCC---------CCEEEEEeCCC-eEEEEE
Confidence 344666777 899999999887 556666788899999999999 67899998766 556654
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.3e-27 Score=221.71 Aligned_cols=254 Identities=13% Similarity=0.079 Sum_probs=186.7
Q ss_pred CCCcccccccCC------CccCccccCeeEEEEcCCCCeEEEEEeCC----eEEEEeCCCc----eEEEEeeccCceeEE
Q 038802 33 TPESKYWSSFKP------HQIPGLVSSINSIVFSPTTSHLFAATHSA----SLTLFSSQTL----EKHSAISSFKDVVTC 98 (532)
Q Consensus 33 ~~~~~~w~~~~~------~~~~~h~~~V~~i~~sp~~~~l~~~~~d~----~v~i~~~~~~----~~~~~~~~~~~~v~~ 98 (532)
...+++|+.... ++..+|..+|..+.|.||..-|++..-.+ .|+..-.... .......+|...|..
T Consensus 62 ~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~ 141 (356)
T 2w18_A 62 EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLG 141 (356)
T ss_dssp SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEE
T ss_pred cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEe
Confidence 346788887765 34588999999999999877666655422 2222211111 222222445555555
Q ss_pred EEEccCCCEEEEEc--CCCCEEEEEC-CCCceEEEecCCCCCEEEEEeec--CCCcEEEEEeCCCeEEEEECCCCeEEEe
Q 038802 99 SSFRPDGSLLAASD--LSGLIQVFDV-KSRTPLRRLKSHTRPVRFVKYPF--LDKLHLVSGGDDGIVKFWDVAGESVVLD 173 (532)
Q Consensus 99 ~~~~~~~~~l~~g~--~dg~i~iwd~-~~~~~~~~~~~h~~~i~~~~~~~--~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 173 (532)
+ ++++++.+++ .|+.|++|++ .+++.+..+.+|...+..++|++ .++..|++|+.|++|++||+.+++++++
T Consensus 142 l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~t 218 (356)
T 2w18_A 142 L---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKK 218 (356)
T ss_dssp E---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred c---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEE
Confidence 4 5777777754 6999999999 55888888888999888888887 3678999999999999999999999999
Q ss_pred ccCCC---CceEEEEEeCCCCCEE------------EEEeCCCeEEEEEcccCCceeEEE----ecCCCcEEEEEEecCC
Q 038802 174 LFGHK---DYVRCGDCSPVNGDMF------------VTGSYDHTVKLWDVRVENSKSVME----VNHGKPIEDVMFLPSG 234 (532)
Q Consensus 174 ~~~~~---~~v~~i~~~~~~~~~l------------~s~s~dg~i~iwd~~~~~~~~~~~----~~~~~~v~~i~~~~~~ 234 (532)
+.+|. ..+.+++|+| ++.++ ++|+.|++|++||..+++...... .+|...+.+..+ ++
T Consensus 219 L~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg 295 (356)
T 2w18_A 219 MHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KD 295 (356)
T ss_dssp EECCC---CCCEEEEEEE-TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ET
T ss_pred EcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CC
Confidence 97654 3677789999 88776 668889999999998866554442 144444444444 47
Q ss_pred CEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceE-EEEEeccCCCCCccccccEEEEEecCCeEEEEEC
Q 038802 235 GLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVT-SVCVGRVGNESGEEAMQYRILSVALDGYMKVFDY 302 (532)
Q Consensus 235 ~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 302 (532)
.++++++ |++|+|||+.++ +++.++.+|...+. .++|+|+ +.+|++|+.|++|+|||+
T Consensus 296 ~~lASgS~DgTIkIWDl~tG-k~l~tL~gH~~~vvs~vafSPD---------G~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 296 HCAAAILTSGTIAIWDLLLG-QCTALLPPVSDQHWSFVKWSGT---------DSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TEEEEEETTSCEEEEETTTC-SEEEEECCC--CCCCEEEECSS---------SSEEEEECTTSCEEEEEE
T ss_pred CEEEEEcCCCcEEEEECCCC-cEEEEecCCCCCeEEEEEECCC---------CCEEEEEECCCcEEEecC
Confidence 8899988 999999999988 88899999987665 5899999 689999999999999995
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=8.4e-27 Score=237.92 Aligned_cols=280 Identities=13% Similarity=0.042 Sum_probs=227.7
Q ss_pred EEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEEC--CCCceEEEecCCC
Q 038802 58 VFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDV--KSRTPLRRLKSHT 135 (532)
Q Consensus 58 ~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~--~~~~~~~~~~~h~ 135 (532)
.|+|++..+++++.++.|.+||..+++.+.++..+.. +.+++|+|||++|++++.|++|.+||+ .+++.+..+. +.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IG 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CC
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cC
Confidence 3889998888888899999999999999999884444 889999999999999999999999999 8888888887 45
Q ss_pred CCEEEEEeecC---CCcEEEEEe-CCCeEEEEECCCCeEEEeccCC----------C-CceEEEEEeCCCCCEEEEEeCC
Q 038802 136 RPVRFVKYPFL---DKLHLVSGG-DDGIVKFWDVAGESVVLDLFGH----------K-DYVRCGDCSPVNGDMFVTGSYD 200 (532)
Q Consensus 136 ~~i~~~~~~~~---~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~----------~-~~v~~i~~~~~~~~~l~s~s~d 200 (532)
..+..++|+|. +++++++++ .+++|.+||..+++++..+..+ . ..+.++.++|..+.++++...+
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~ 301 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET 301 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC
Confidence 56799999971 456677766 5899999999999988877542 2 3688999999455677788889
Q ss_pred CeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCeeeEEccC----CCcceEEEEEec
Q 038802 201 HTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKMVYSMES----HNKTVTSVCVGR 274 (532)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~----~~~~i~~~~~~~ 274 (532)
+.|.+||+.+.+........+...+.++.|+|+|+++++++ +++|.+||+.++ +++..+.. |.+....+ ++|
T Consensus 302 g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg-~l~~~i~~g~~ph~g~g~~~-~~p 379 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR-RLSALVDVGKTPHPGRGANF-VHP 379 (543)
T ss_dssp TEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT-EEEEEEECSSSBCCTTCEEE-EET
T ss_pred CeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC-eEEEeeccCCCCCCCCCccc-CCC
Confidence 99999999886655544556777888999999999766554 789999999987 77776653 55444333 466
Q ss_pred cCCCCCccccccEEEEEe-cCCeEEEEECCC-------ceEEEeee-cCCCeeEEEEecCCCEEEEEe-------cCCcE
Q 038802 275 VGNESGEEAMQYRILSVA-LDGYMKVFDYGK-------MKVTHSMR-FPAPLMSVAFSPDCMTRVIGT-------SNGTI 338 (532)
Q Consensus 275 ~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~-------~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~-------~dg~i 338 (532)
++ +..+++++ .|++|.+||+.+ ++++.++. +...+..++++|+|++|++++ .++.|
T Consensus 380 ~~--------g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v 451 (543)
T 1nir_A 380 KY--------GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSV 451 (543)
T ss_dssp TT--------EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCE
T ss_pred CC--------ccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceE
Confidence 64 55667765 589999999998 89999998 556789999999999999987 37799
Q ss_pred EEEeecCcccc
Q 038802 339 FAGRRKKKENV 349 (532)
Q Consensus 339 ~iw~~~~~~~~ 349 (532)
.+||..+.+..
T Consensus 452 ~v~d~~~~~~~ 462 (543)
T 1nir_A 452 AVFDLKNLDAK 462 (543)
T ss_dssp EEEETTCTTSC
T ss_pred EEEECCCCCCC
Confidence 99999988754
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=7.2e-27 Score=238.39 Aligned_cols=303 Identities=11% Similarity=0.102 Sum_probs=239.2
Q ss_pred CCCCcccccccCCCc---cC-ccccCeeEEEEcCCCCeEEEEEeCCeEEEEeC--CCceEEEEeeccCceeEEEEEcc--
Q 038802 32 QTPESKYWSSFKPHQ---IP-GLVSSINSIVFSPTTSHLFAATHSASLTLFSS--QTLEKHSAISSFKDVVTCSSFRP-- 103 (532)
Q Consensus 32 ~~~~~~~w~~~~~~~---~~-~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~--~~~~~~~~~~~~~~~v~~~~~~~-- 103 (532)
.+..+.+|+.-.... +. ++. +.+++|+|+|+++++++.|+.|.+||+ .+++.+..+.. ...+..++|+|
T Consensus 157 ~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~ 233 (543)
T 1nir_A 157 DAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFK 233 (543)
T ss_dssp GGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCST
T ss_pred CCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCc
Confidence 456778888644332 33 333 889999999999999999999999999 88888888874 55679999999
Q ss_pred --CCCEEEEEcC-CCCEEEEECCCCceEEEecCC-----------CCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCe
Q 038802 104 --DGSLLAASDL-SGLIQVFDVKSRTPLRRLKSH-----------TRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGES 169 (532)
Q Consensus 104 --~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~h-----------~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~ 169 (532)
||+++++++. +++|.+||..+++++..+..+ ...+.++.++|.+..++++...++.|.+||..+.+
T Consensus 234 ~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~ 313 (543)
T 1nir_A 234 GYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID 313 (543)
T ss_dssp TCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSS
T ss_pred CCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCC
Confidence 9999998874 899999999999988887642 23789999999566677888889999999998765
Q ss_pred EEE--eccCCCCceEEEEEeCCCCCEEEEE-eCCCeEEEEEcccCCceeEEEec---CCCcEEEEEEecC-CCEEEEEc-
Q 038802 170 VVL--DLFGHKDYVRCGDCSPVNGDMFVTG-SYDHTVKLWDVRVENSKSVMEVN---HGKPIEDVMFLPS-GGLIATAG- 241 (532)
Q Consensus 170 ~~~--~~~~~~~~v~~i~~~~~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~---~~~~v~~i~~~~~-~~~l~~~~- 241 (532)
.+. .+ .+...+.++.|+| ++++++++ ..+++|.+||..+++....+..+ |......+ ++|+ +.+++++.
T Consensus 314 ~l~~~~i-~~~~~~~~~~~sp-dg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~ 390 (543)
T 1nir_A 314 NLTVTSI-GAAPFLHDGGWDS-SHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHL 390 (543)
T ss_dssp SCEEEEE-ECCSSCCCEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBS
T ss_pred cceeEEe-ccCcCccCceECC-CCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccC
Confidence 433 33 3566788899999 88876654 46889999999987665555432 54433333 4676 66777764
Q ss_pred -CCeEEEEEccCC------CeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEe-------cCCeEEEEECCCceE
Q 038802 242 -GNSVKIWDLIGG------GKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVA-------LDGYMKVFDYGKMKV 307 (532)
Q Consensus 242 -d~~i~iwd~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~ 307 (532)
|++|.+||+.+. .+++.++..|...+..+.++|+ +.+|++++ .+++|.+||+.+++.
T Consensus 391 ~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pd---------g~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 391 GDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPK---------SSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT---------CCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred CCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCC---------CCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 689999999871 3788999999888899999999 67888887 378999999999876
Q ss_pred E-Eee---------ecCCCeeEEEEecCCCEEEEEe-----cCCcEEEEeecCcccc
Q 038802 308 T-HSM---------RFPAPLMSVAFSPDCMTRVIGT-----SNGTIFAGRRKKKENV 349 (532)
Q Consensus 308 ~-~~~---------~~~~~v~~~~~s~~~~~l~~g~-----~dg~i~iw~~~~~~~~ 349 (532)
. ..+ .+...+..++|+|+|+.++++. .|+.|.|||.++.+..
T Consensus 462 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~ 518 (543)
T 1nir_A 462 KYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLK 518 (543)
T ss_dssp CCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEE
T ss_pred CeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEE
Confidence 6 443 2356899999999999998763 3799999999998765
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=4e-27 Score=233.19 Aligned_cols=280 Identities=10% Similarity=0.026 Sum_probs=220.7
Q ss_pred cccCeeEEEEcCCCC-eEEEEE----eCC----eEEEEeC--CCceEE--EEeeccCceeEEEEEcc-------------
Q 038802 50 LVSSINSIVFSPTTS-HLFAAT----HSA----SLTLFSS--QTLEKH--SAISSFKDVVTCSSFRP------------- 103 (532)
Q Consensus 50 h~~~V~~i~~sp~~~-~l~~~~----~d~----~v~i~~~--~~~~~~--~~~~~~~~~v~~~~~~~------------- 103 (532)
+...+...+|.+.|. ++++|+ .+| .+++||+ .+++.+ ..+.+|...+..+++++
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 445788889988886 454665 357 8999999 888877 45788888888777765
Q ss_pred -CCCEEEEEcCC------CCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCC---eEEEEECCCCeEEEe
Q 038802 104 -DGSLLAASDLS------GLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDG---IVKFWDVAGESVVLD 173 (532)
Q Consensus 104 -~~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg---~i~iwd~~~~~~~~~ 173 (532)
.+..++.++.+ +.|++||+.. .....+.+|...+.+++|+| +++.|++++.++ .|++||+.+++.. .
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~-~ 217 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVR-Q 217 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEE-E
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEE-E
Confidence 15566655543 7999999974 55677778999999999999 999999999885 9999999988775 4
Q ss_pred ccCCCCceEEEEEeCCCCCEEE-EEeCCCe--EEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc--CC--eEE
Q 038802 174 LFGHKDYVRCGDCSPVNGDMFV-TGSYDHT--VKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG--GN--SVK 246 (532)
Q Consensus 174 ~~~~~~~v~~i~~~~~~~~~l~-s~s~dg~--i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~--~i~ 246 (532)
+..|...+.+++|+| +++.|+ +++.|+. |++||+.+++. .....|...+.+++|+|+|+.|+.++ ++ .|.
T Consensus 218 l~~~~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~--~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~ 294 (415)
T 2hqs_A 218 VASFPRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQI--RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVY 294 (415)
T ss_dssp EECCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE--EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred eecCCCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCE--EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEE
Confidence 666888999999999 888777 6666654 99999987543 33336778899999999999888776 34 688
Q ss_pred EEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecC---CeEEEEECCCceEEEeeecCCCeeEEEEe
Q 038802 247 IWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALD---GYMKVFDYGKMKVTHSMRFPAPLMSVAFS 323 (532)
Q Consensus 247 iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~v~~~~~s 323 (532)
+||+.++ . ...+..+...+.+++|+|+ +.+|++++.+ +.|++||+.+++......+ ..+.+++|+
T Consensus 295 ~~d~~~~-~-~~~l~~~~~~~~~~~~spd---------G~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~-~~~~~~~~s 362 (415)
T 2hqs_A 295 KVNINGG-A-PQRITWEGSQNQDADVSSD---------GKFMVMVSSNGGQQHIAKQDLATGGVQVLSST-FLDETPSLA 362 (415)
T ss_dssp EEETTSS-C-CEECCCSSSEEEEEEECTT---------SSEEEEEEECSSCEEEEEEETTTCCEEECCCS-SSCEEEEEC
T ss_pred EEECCCC-C-EEEEecCCCcccCeEECCC---------CCEEEEEECcCCceEEEEEECCCCCEEEecCC-CCcCCeEEc
Confidence 8888765 3 3455667778999999999 5677777664 5899999999887543334 489999999
Q ss_pred cCCCEEEEEecCC---cEEEEeecCcc
Q 038802 324 PDCMTRVIGTSNG---TIFAGRRKKKE 347 (532)
Q Consensus 324 ~~~~~l~~g~~dg---~i~iw~~~~~~ 347 (532)
|||++|++++.++ .|++|++..+.
T Consensus 363 pdg~~l~~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 363 PNGTMVIYSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp TTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred CCCCEEEEEEcCCCccEEEEEECCCCc
Confidence 9999999998877 79999987654
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=2.6e-26 Score=227.34 Aligned_cols=274 Identities=10% Similarity=0.043 Sum_probs=217.4
Q ss_pred Ccccccc--cCCCc-----cCccccCeeEEEEcC--------------CCCeEEEEEeC------CeEEEEeCCCceEEE
Q 038802 35 ESKYWSS--FKPHQ-----IPGLVSSINSIVFSP--------------TTSHLFAATHS------ASLTLFSSQTLEKHS 87 (532)
Q Consensus 35 ~~~~w~~--~~~~~-----~~~h~~~V~~i~~sp--------------~~~~l~~~~~d------~~v~i~~~~~~~~~~ 87 (532)
.+++|+. ..... +.+|...+..+++++ .+..++.++.+ +.|++||... ....
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~ 172 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQF 172 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCE
T ss_pred EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCE
Confidence 7899998 65543 467888888888775 25567777765 7999999974 5567
Q ss_pred EeeccCceeEEEEEccCCCEEEEEcCCC---CEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEE-EEeCCCe--EE
Q 038802 88 AISSFKDVVTCSSFRPDGSLLAASDLSG---LIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLV-SGGDDGI--VK 161 (532)
Q Consensus 88 ~~~~~~~~v~~~~~~~~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~-s~s~dg~--i~ 161 (532)
.+..|...+.+++|+|||++|++++.++ .|++||+.+++.. .+..|...+.+++|+| ++..|+ +++.|+. |+
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~sp-dg~~la~~~~~~g~~~i~ 250 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSP-DGSKLAFALSKTGSLNLY 250 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECT-TSSEEEEEECTTSSCEEE
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcC-CCCEEEEEEecCCCceEE
Confidence 7888999999999999999999998775 9999999988765 5667888999999999 887776 6666654 99
Q ss_pred EEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeC-CC--eEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEE
Q 038802 162 FWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSY-DH--TVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIA 238 (532)
Q Consensus 162 iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~-dg--~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 238 (532)
+||+.+++. ..+..|...+.+++|+| +++.|++++. ++ .|.+||+.++... ....+...+.+++|+|+|++|+
T Consensus 251 ~~d~~~~~~-~~l~~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~~~--~l~~~~~~~~~~~~spdG~~l~ 326 (415)
T 2hqs_A 251 VMDLASGQI-RQVTDGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGAPQ--RITWEGSQNQDADVSSDGKFMV 326 (415)
T ss_dssp EEETTTCCE-EECCCCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCCE--ECCCSSSEEEEEEECTTSSEEE
T ss_pred EEECCCCCE-EeCcCCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCCEE--EEecCCCcccCeEECCCCCEEE
Confidence 999998876 56777888999999999 9998888876 45 6777788775432 2234667899999999999998
Q ss_pred EEc-C---CeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCC---eEEEEECCCceEEEee
Q 038802 239 TAG-G---NSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDG---YMKVFDYGKMKVTHSM 311 (532)
Q Consensus 239 ~~~-d---~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~ 311 (532)
+++ + ..|.+||+.++ .. ..+..+. .+.+++|+|+ +.+|++++.++ .|++||+.........
T Consensus 327 ~~~~~~g~~~i~~~d~~~~-~~-~~l~~~~-~~~~~~~spd---------g~~l~~~s~~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 327 MVSSNGGQQHIAKQDLATG-GV-QVLSSTF-LDETPSLAPN---------GTMVIYSSSQGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp EEEECSSCEEEEEEETTTC-CE-EECCCSS-SCEEEEECTT---------SSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred EEECcCCceEEEEEECCCC-CE-EEecCCC-CcCCeEEcCC---------CCEEEEEEcCCCccEEEEEECCCCcEEEee
Confidence 877 3 48999999876 33 4455554 8999999999 56777777776 8999999866655544
Q ss_pred ecCCCeeEEEEecCCC
Q 038802 312 RFPAPLMSVAFSPDCM 327 (532)
Q Consensus 312 ~~~~~v~~~~~s~~~~ 327 (532)
.+.+.|.+++|+|...
T Consensus 395 ~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 395 ATDGQVKFPAWSPYLH 410 (415)
T ss_dssp CSSSEEEEEEECCCCC
T ss_pred CCCCCCcCCccccccc
Confidence 5778999999999643
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=5.6e-25 Score=213.13 Aligned_cols=273 Identities=14% Similarity=0.097 Sum_probs=220.0
Q ss_pred cccCeeEEEEcCCCCeEEEEEe-------CCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEE-EEcCCCCEEEEE
Q 038802 50 LVSSINSIVFSPTTSHLFAATH-------SASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLA-ASDLSGLIQVFD 121 (532)
Q Consensus 50 h~~~V~~i~~sp~~~~l~~~~~-------d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd 121 (532)
....+..++|+|+++++++++. ++.|.+||..+++....+.. ...+.+++|+|+|++++ ++..++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 4457889999999998888874 56899999999998888765 34578899999999655 455679999999
Q ss_pred CCCCceEEEecCCCCC---------EEEEEeecCCCcEEEEEe--CCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCC
Q 038802 122 VKSRTPLRRLKSHTRP---------VRFVKYPFLDKLHLVSGG--DDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVN 190 (532)
Q Consensus 122 ~~~~~~~~~~~~h~~~---------i~~~~~~~~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~ 190 (532)
..+++.+..+..+... +.+++|+| +++.+++++ .++.|.+||..+++....+..+...+.+++|+| +
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~-d 195 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDS-E 195 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEET-T
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECC-C
Confidence 9999988887765432 78899999 777666665 478999999999999888876666688999999 9
Q ss_pred CCEEEEEeCCCeEEEEEcccCCceeEEEe---cCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCeeeEEccCCCc
Q 038802 191 GDMFVTGSYDHTVKLWDVRVENSKSVMEV---NHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKMVYSMESHNK 265 (532)
Q Consensus 191 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~ 265 (532)
++.+++++.++.|.+||+.+++....... .+...+.+++|+|+++.+++++ ++.|.+||+.++ +.+..+.....
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~~~~~ 274 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG-NILAKVAAPES 274 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC-CEEEEEECSSC
T ss_pred CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC-cEEEEEEcCCC
Confidence 99999999999999999988665555543 2455678899999999776665 589999999877 55555554332
Q ss_pred ceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCC
Q 038802 266 TVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNG 336 (532)
Q Consensus 266 ~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg 336 (532)
..++|+|++ ..++++...++.|.+||..+++.+..+.....+.+++|+|||++++++..++
T Consensus 275 --~~~~~s~dg--------~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 275 --LAVLFNPAR--------NEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp --CCEEEETTT--------TEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred --ceEEECCCC--------CEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 568999994 3345555579999999999999999988888899999999999888777664
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=1.3e-24 Score=208.76 Aligned_cols=276 Identities=15% Similarity=0.143 Sum_probs=204.5
Q ss_pred EEEcCCCCe-EEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcC-CCCEEEEECCCCce-EEEecC
Q 038802 57 IVFSPTTSH-LFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDL-SGLIQVFDVKSRTP-LRRLKS 133 (532)
Q Consensus 57 i~~sp~~~~-l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~-~~~~~~ 133 (532)
..|.+++.+ +++++.++.|.+||..+++....+..+...+ +++|+|+|+++++++. ++.|.+||..+++. ...+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 346666665 5556678999999999999988887767777 9999999997766554 88999999999887 777777
Q ss_pred CCCCEEEEEeecCCCcEEEEEeCCC---eEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCE-EEEEeCCCe-EEEEEc
Q 038802 134 HTRPVRFVKYPFLDKLHLVSGGDDG---IVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDM-FVTGSYDHT-VKLWDV 208 (532)
Q Consensus 134 h~~~i~~~~~~~~~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~-l~s~s~dg~-i~iwd~ 208 (532)
+..+..+++|+| ++.+++++..++ .|.+||+.+++.+..+..+ ....+++|+| ++++ ++++..++. |.+|++
T Consensus 82 ~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 82 GQSSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISP-NGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp CSSCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECT-TSSCEEEEEETTTTEEEEEEE
T ss_pred CCCCccceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECC-CCCEEEEEecCCCceEEEEEE
Confidence 777766699999 888888555553 8999999999988877644 4468999999 7764 455566688 999998
Q ss_pred ccCCcee---EEEecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCee---eEEccCCCcceEEEEEeccCCCCC
Q 038802 209 RVENSKS---VMEVNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKM---VYSMESHNKTVTSVCVGRVGNESG 280 (532)
Q Consensus 209 ~~~~~~~---~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~ 280 (532)
....... ............++|+|+|++++.++ ++.|.+||+.++ +. +..+.. ...+..++|+|++
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~-~~~~~~~~~~~-~~~~~~~~~spdg---- 232 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNP-ENITLLNAVGT-NNLPGTIVVSRDG---- 232 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSST-TSCEEEEEEEC-SSCCCCEEECTTS----
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCC-cccceeeeccC-CCCCceEEECCCC----
Confidence 7533221 12224556789999999999655444 789999999876 44 555543 3567889999994
Q ss_pred ccccccEE-EEEecCCeEEEEECCCceE--EEeeec-----CC---CeeEEEEecCCCEEEEEec-CCcEEEEeecCcc
Q 038802 281 EEAMQYRI-LSVALDGYMKVFDYGKMKV--THSMRF-----PA---PLMSVAFSPDCMTRVIGTS-NGTIFAGRRKKKE 347 (532)
Q Consensus 281 ~~~~~~~l-~s~~~dg~i~iwd~~~~~~--~~~~~~-----~~---~v~~~~~s~~~~~l~~g~~-dg~i~iw~~~~~~ 347 (532)
.++ ++...++.|.+||+.+++. +..+.. .. ....++|+|||++|++++. ++.|.+|++....
T Consensus 233 -----~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 233 -----STVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp -----SEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred -----CEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 544 4555678899999999887 433331 12 2245899999998876655 5689999998654
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=2.4e-25 Score=237.91 Aligned_cols=279 Identities=9% Similarity=-0.040 Sum_probs=216.8
Q ss_pred ccCeeEEEEcCCCCeEEEEEe-CC-----eEEEEeCCCceEEEEeeccCc------------------------eeEEEE
Q 038802 51 VSSINSIVFSPTTSHLFAATH-SA-----SLTLFSSQTLEKHSAISSFKD------------------------VVTCSS 100 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~-d~-----~v~i~~~~~~~~~~~~~~~~~------------------------~v~~~~ 100 (532)
...|.+++|+|||++|++++. |+ .|++||+.+++....+..+.. .+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457899999999999999998 88 999999999887777655433 388999
Q ss_pred EccCCCEEEEEcCCCCEEEEECCCCc--eEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCC
Q 038802 101 FRPDGSLLAASDLSGLIQVFDVKSRT--PLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHK 178 (532)
Q Consensus 101 ~~~~~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 178 (532)
|+|||++|++++. +.|++||+.++. ....+..|...+.+++|+| +++.|++++. +.|++||+.+++.......+.
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIRG-RNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEET-TEEEEEETTTTEEEECCCCCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEeC-CcEEEEecCCCCEEEeccCCc
Confidence 9999999999885 999999998873 4556777888999999999 9999998874 699999999988776555444
Q ss_pred Cc----------------eEEEEEeCCCCCEEEEEeCCC---------------------------------eEEEEEcc
Q 038802 179 DY----------------VRCGDCSPVNGDMFVTGSYDH---------------------------------TVKLWDVR 209 (532)
Q Consensus 179 ~~----------------v~~i~~~~~~~~~l~s~s~dg---------------------------------~i~iwd~~ 209 (532)
.. +.+++|+| +++.|++++.|+ .|.+||+.
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred cceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 32 47799999 999999988765 78899998
Q ss_pred c-CCceeEEEe-cCCCcEEEEEEecCCCEEEEEc------CCeEEEEEccCCCeeeEEccCCCc----ceEEEEEeccCC
Q 038802 210 V-ENSKSVMEV-NHGKPIEDVMFLPSGGLIATAG------GNSVKIWDLIGGGKMVYSMESHNK----TVTSVCVGRVGN 277 (532)
Q Consensus 210 ~-~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~------d~~i~iwd~~~~~~~~~~~~~~~~----~i~~~~~~~~~~ 277 (532)
+ ++....... .+...+.+++| |+|+.|+.++ +..|.+||+.++ .....+..+.. .+..+.|+|+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~spd-- 347 (741)
T 2ecf_A 272 EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN-QQRVLAHETSPTWVPLHNSLRFLDD-- 347 (741)
T ss_dssp TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC-CEEEEEEEECSSCCCCCSCCEECTT--
T ss_pred CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC-ceEEEEEcCCCCcCCcCCceEECCC--
Confidence 7 654433222 46778999999 9999888654 247999999877 44444443332 3468899999
Q ss_pred CCCccccccEEEEEecCCeEEEEECC-CceEEEeee-cCCCeeEE-EEecCCCEEEE-EecCC--cEEEEeecC
Q 038802 278 ESGEEAMQYRILSVALDGYMKVFDYG-KMKVTHSMR-FPAPLMSV-AFSPDCMTRVI-GTSNG--TIFAGRRKK 345 (532)
Q Consensus 278 ~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~-~~~~v~~~-~~s~~~~~l~~-g~~dg--~i~iw~~~~ 345 (532)
+.++++++.||.++||.+. ++. ...+. +...+.++ +|+|+|+.++. ++.++ .+++|++..
T Consensus 348 -------g~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 348 -------GSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp -------SCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred -------CeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 4588899999988888765 344 44443 56678787 59999987765 44455 899999875
No 134
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=1.2e-24 Score=231.19 Aligned_cols=281 Identities=11% Similarity=0.065 Sum_probs=216.5
Q ss_pred cCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC-----Cc
Q 038802 52 SSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS-----RT 126 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-----~~ 126 (532)
..|.+++|+|| ..++++ .++.|++||+.+++... +..+...+.+++|+|||++|+++ .++.|++||+.+ ++
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 57999999999 666665 46999999999876544 44566778899999999999986 589999999998 77
Q ss_pred eEEEecCCCCC--------------EEEEEeecCCCcEEEEEe---------------------------------CCCe
Q 038802 127 PLRRLKSHTRP--------------VRFVKYPFLDKLHLVSGG---------------------------------DDGI 159 (532)
Q Consensus 127 ~~~~~~~h~~~--------------i~~~~~~~~~~~~l~s~s---------------------------------~dg~ 159 (532)
.......+... +.++.|+| ++++|++++ .+..
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 66555444443 47899999 999999887 4578
Q ss_pred EEEEECCCCeEEEecc--CCCCceEEEEEeCCCCCEEEEEeCCC-----eEEEEEcccCCcee-EEEecCCC---cEEEE
Q 038802 160 VKFWDVAGESVVLDLF--GHKDYVRCGDCSPVNGDMFVTGSYDH-----TVKLWDVRVENSKS-VMEVNHGK---PIEDV 228 (532)
Q Consensus 160 i~iwd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~l~s~s~dg-----~i~iwd~~~~~~~~-~~~~~~~~---~v~~i 228 (532)
|.+||+.+++...... .|...+.+++|+| +++.+++++.++ .|.+||+.+++... .....+.. .+.++
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPL 315 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCC
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCc
Confidence 9999999988665442 4677899999999 999999888775 89999998863332 22222222 34678
Q ss_pred EEec--CCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEE-EEEeccCCCCCccccccEEEEEecCC----eEEEE
Q 038802 229 MFLP--SGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTS-VCVGRVGNESGEEAMQYRILSVALDG----YMKVF 300 (532)
Q Consensus 229 ~~~~--~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~l~s~~~dg----~i~iw 300 (532)
+|+| +|+++++++ ++.+++|++...+.....+..|...+.. +.|+|++ ..++++++.++ .|..|
T Consensus 316 ~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg--------~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 316 TFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKG--------TRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp EECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTS--------SEEEEEESSSCTTCBEEEEE
T ss_pred eeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCC--------CEEEEEecCCCCceEEEEEE
Confidence 9999 999998887 7889999887434667778788877877 7999995 33445555555 77888
Q ss_pred ECCCceEEEeeecCCCeeEEEEecCCCEEEEEecC----CcEEEEeecCcc
Q 038802 301 DYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSN----GTIFAGRRKKKE 347 (532)
Q Consensus 301 d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~d----g~i~iw~~~~~~ 347 (532)
|+.+++ ...+.+...+.+++|+|||++++.++.+ +.|++|+..+++
T Consensus 388 d~~~~~-~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 388 DIKGGK-TKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp ETTCCC-CEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EcCCCC-ceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 887776 3445567789999999999998877554 469999998775
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=5e-25 Score=207.46 Aligned_cols=253 Identities=14% Similarity=0.139 Sum_probs=197.1
Q ss_pred EEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC-CceEEEecCC-CCCEEEEEeecC
Q 038802 69 ATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS-RTPLRRLKSH-TRPVRFVKYPFL 146 (532)
Q Consensus 69 ~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~h-~~~i~~~~~~~~ 146 (532)
++.++.|++||+.+++.. .+..|...|.+++|+|+|++|++++ ++.|.+||+.+ ++.......+ ...+.+++|+|
T Consensus 18 ~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp- 94 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP- 94 (297)
T ss_dssp CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT-
T ss_pred CCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC-
Confidence 346789999999988766 4556889999999999999999987 88999999998 8777766665 36788999999
Q ss_pred CCcEEEEEeC--CC--eEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEE-EEeCCCeEEEEEcccCCceeEEEecC
Q 038802 147 DKLHLVSGGD--DG--IVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFV-TGSYDHTVKLWDVRVENSKSVMEVNH 221 (532)
Q Consensus 147 ~~~~l~s~s~--dg--~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~ 221 (532)
++..+++++. ++ .|..|+..++.. ..+..+. .+.+++|+| +++.++ +++.|+.+++|++............+
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~-~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKNL-PSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCC-EECCSSS-SEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCCEEECCCS
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCce-EEeecCC-CccceEECC-CCCEEEEEECCCCceEEEEEECCCCcceEcccC
Confidence 8899999883 34 455555555543 3344333 488999999 888766 78889999999976433333444467
Q ss_pred CCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecC-----
Q 038802 222 GKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALD----- 294 (532)
Q Consensus 222 ~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~d----- 294 (532)
...+.+++|+|+++.++.++ ++.+.+|++.........+..|...+.++.|+|+ +.+|++++.+
T Consensus 172 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~d---------g~~l~~~~~~~~~~~ 242 (297)
T 2ojh_A 172 EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPS---------GDKVVFVSYDADVFD 242 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTT---------SSEEEEEEEETTCCS
T ss_pred CCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCC---------CCEEEEEEcCCCCCc
Confidence 78899999999999777654 7889999987444567778888889999999999 5677777665
Q ss_pred ------CeEEEEECCCceEEEee---ecCCCeeEEEEecCCCEEEEEecCC
Q 038802 295 ------GYMKVFDYGKMKVTHSM---RFPAPLMSVAFSPDCMTRVIGTSNG 336 (532)
Q Consensus 295 ------g~i~iwd~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~g~~dg 336 (532)
+.|++||+.+++..... .+...+.+++|+|+|++|++++.+.
T Consensus 243 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 243 HPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred ccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 56999999887653332 4677899999999999998887664
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=2.7e-24 Score=207.31 Aligned_cols=269 Identities=11% Similarity=0.102 Sum_probs=193.9
Q ss_pred CeEEEE-EeCCeEEEEeCC-Cc--eEEEEeeccCceeEEEEEccCCCEEEEEcCC-CCEEEEECC--CCc--eEEEecCC
Q 038802 64 SHLFAA-THSASLTLFSSQ-TL--EKHSAISSFKDVVTCSSFRPDGSLLAASDLS-GLIQVFDVK--SRT--PLRRLKSH 134 (532)
Q Consensus 64 ~~l~~~-~~d~~v~i~~~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d-g~i~iwd~~--~~~--~~~~~~~h 134 (532)
.+++++ +.++.|++|++. ++ +.... ..+...+.+++|+|+|++|++++.+ +.|.+|++. +++ .+..+..+
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 345554 668999999985 33 23333 3467789999999999988888776 899999997 544 33445444
Q ss_pred CCCEEEEEeecCCCcEEEEEe-CCCeEEEEECC---CCeEEEeccCCCCceEEEEEeCCCCCEEEEEe-CCCeEEEEEcc
Q 038802 135 TRPVRFVKYPFLDKLHLVSGG-DDGIVKFWDVA---GESVVLDLFGHKDYVRCGDCSPVNGDMFVTGS-YDHTVKLWDVR 209 (532)
Q Consensus 135 ~~~i~~~~~~~~~~~~l~s~s-~dg~i~iwd~~---~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s-~dg~i~iwd~~ 209 (532)
. .+.+++|+| ++.++++++ .++.|.+||+. ..+....+..+ ..+.+++|+| +++++++++ .++.|.+||+.
T Consensus 84 ~-~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 84 G-SLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISP-DNRTLWVPALKQDRICLFTVS 159 (343)
T ss_dssp S-CCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECT-TSSEEEEEEGGGTEEEEEEEC
T ss_pred C-CCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECC-CCCEEEEecCCCCEEEEEEec
Confidence 4 788999999 787776665 48899999994 34455555443 4588999999 888777777 89999999998
Q ss_pred c-CCcee----EEEecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCC-Cee--eEEc---cCC---CcceEEEEEe
Q 038802 210 V-ENSKS----VMEVNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGG-GKM--VYSM---ESH---NKTVTSVCVG 273 (532)
Q Consensus 210 ~-~~~~~----~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~-~~~--~~~~---~~~---~~~i~~~~~~ 273 (532)
+ ++... .........+.+++|+|+++++++++ ++.|.+||+... +.. .... ... ...+..++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 160 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp TTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred CCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEEC
Confidence 7 43332 22333456788999999999665443 789999999531 111 2222 111 2356789999
Q ss_pred ccCCCCCccccccEEEEEecCCeEEEEECC----CceEEEeeecCCCeeEEEEecCCCEEEEEe-cCCcEEEEeecC
Q 038802 274 RVGNESGEEAMQYRILSVALDGYMKVFDYG----KMKVTHSMRFPAPLMSVAFSPDCMTRVIGT-SNGTIFAGRRKK 345 (532)
Q Consensus 274 ~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~-~dg~i~iw~~~~ 345 (532)
|++ ..+++++..++.|.+||+. +.+.+..+.....+.+++|+|+|++|++++ .++.|.+|+++.
T Consensus 240 ~dg--------~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 240 PDG--------RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp TTS--------SEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred CCC--------CEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 994 2344466689999999998 345566666555689999999999988888 579999997764
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=2.7e-24 Score=206.78 Aligned_cols=267 Identities=13% Similarity=0.103 Sum_probs=209.5
Q ss_pred CeEEEEEeCCeEEEEeCCCceEEEEeeccCc--eeEEEEEccCCCEEE-EEcCCCCEEEEECCCCceEEEecCC-----C
Q 038802 64 SHLFAATHSASLTLFSSQTLEKHSAISSFKD--VVTCSSFRPDGSLLA-ASDLSGLIQVFDVKSRTPLRRLKSH-----T 135 (532)
Q Consensus 64 ~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~~~~~h-----~ 135 (532)
+++++++.++.|.+||..+++....+..... .+.+++|+|+|++++ +++.++.|.+||+.+++.+..+... .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4788899999999999999988887764332 578899999998664 5566789999999999887766532 1
Q ss_pred CCEEEEEeecCCCcEEEEEe------------CCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeE
Q 038802 136 RPVRFVKYPFLDKLHLVSGG------------DDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTV 203 (532)
Q Consensus 136 ~~i~~~~~~~~~~~~l~s~s------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i 203 (532)
..+.+++|+| +++.+++++ .++.|.+||+.+++.+..+.. ...+.+++|+| ++++++++ ++.|
T Consensus 82 ~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~--~~~i 156 (337)
T 1pby_B 82 KSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWAR-DGSKLYGL--GRDL 156 (337)
T ss_dssp ECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECT-TSSCEEEE--SSSE
T ss_pred ccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECC-CCCEEEEe--CCeE
Confidence 2567899999 888888876 579999999999988777654 44577899999 88878777 6889
Q ss_pred EEEEcccCCceeEEEecC-CCcEEEEEEecCCCEEEEEc--CC-----------------------eEEEEEccCCCeee
Q 038802 204 KLWDVRVENSKSVMEVNH-GKPIEDVMFLPSGGLIATAG--GN-----------------------SVKIWDLIGGGKMV 257 (532)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~-~~~v~~i~~~~~~~~l~~~~--d~-----------------------~i~iwd~~~~~~~~ 257 (532)
.+||+.+++......... ..+ +.|+|++..++.++ ++ .|.+||+.++....
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 233 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM 233 (337)
T ss_dssp EEEETTTTEEEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEE
T ss_pred EEEECCCCcEeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceE
Confidence 999998865444433222 122 37889888665554 22 46899998874333
Q ss_pred EEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCc
Q 038802 258 YSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGT 337 (532)
Q Consensus 258 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 337 (532)
..+..+...+.+++|+|+ +.+++++ ++.|.+||+.+++.+..+.....+.+++|+|+|+++++++.++.
T Consensus 234 ~~~~~~~~~~~~~~~s~d---------g~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 302 (337)
T 1pby_B 234 REVRIMDVFYFSTAVNPA---------KTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGD 302 (337)
T ss_dssp EEEEECSSCEEEEEECTT---------SSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSE
T ss_pred eecCCCCCceeeEEECCC---------CCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCc
Confidence 444556677889999999 5667776 79999999999999988887778999999999999999999999
Q ss_pred EEEEeecCcccc
Q 038802 338 IFAGRRKKKENV 349 (532)
Q Consensus 338 i~iw~~~~~~~~ 349 (532)
|.+|+..+.+..
T Consensus 303 i~v~d~~~~~~~ 314 (337)
T 1pby_B 303 LAAYDAETLEKK 314 (337)
T ss_dssp EEEEETTTCCEE
T ss_pred EEEEECcCCcEE
Confidence 999999887654
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=1.5e-24 Score=231.87 Aligned_cols=280 Identities=11% Similarity=0.089 Sum_probs=216.4
Q ss_pred CeeEEEEcCCCCeEEEEEeCCeEEEEeCCCce--EEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEE
Q 038802 53 SINSIVFSPTTSHLFAATHSASLTLFSSQTLE--KHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRR 130 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~ 130 (532)
.|.+++|||||++|++++. +.|++||+.++. ....+..|...+.+++|+|||++|++++ ++.|++||+.+++....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence 3899999999999998886 999999998873 4456677788999999999999999987 56899999998876665
Q ss_pred ecCCCCC----------------EEEEEeecCCCcEEEEEeCCC---------------------------------eEE
Q 038802 131 LKSHTRP----------------VRFVKYPFLDKLHLVSGGDDG---------------------------------IVK 161 (532)
Q Consensus 131 ~~~h~~~----------------i~~~~~~~~~~~~l~s~s~dg---------------------------------~i~ 161 (532)
...+... +.+++|+| +++.|++++.|+ .|.
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 5544432 47799999 899899887765 899
Q ss_pred EEECCC-CeEEEecc--CCCCceEEEEEeCCCCCEEEEEeC-----CCeEEEEEcccCCceeEEEecCCC---cEEEEEE
Q 038802 162 FWDVAG-ESVVLDLF--GHKDYVRCGDCSPVNGDMFVTGSY-----DHTVKLWDVRVENSKSVMEVNHGK---PIEDVMF 230 (532)
Q Consensus 162 iwd~~~-~~~~~~~~--~~~~~v~~i~~~~~~~~~l~s~s~-----dg~i~iwd~~~~~~~~~~~~~~~~---~v~~i~~ 230 (532)
+||+.+ ++...... .|...+.+++| | +++.|++++. +..|++||+.+++........... .+.+++|
T Consensus 267 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 267 VISPAEQAQTQWIDLGKEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRF 344 (741)
T ss_dssp EECSSTTCCCEEECCCSCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEE
T ss_pred EEECCCCCceEEecCCCCcceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEE
Confidence 999988 77655443 47788999999 9 9998887654 568999999987665555433222 4568999
Q ss_pred ecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEE-EEeccCCCCCccccccEEEEEecCC--eEEEEECCC-c
Q 038802 231 LPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSV-CVGRVGNESGEEAMQYRILSVALDG--YMKVFDYGK-M 305 (532)
Q Consensus 231 ~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~-~ 305 (532)
+|+|+++++++ ++.+.+|.+...+. ...+..|...+..+ .|+|++ ..++++++.++ .+++|++.. +
T Consensus 345 spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg--------~~l~~~~~~~~~~~~~l~~~~~~g 415 (741)
T 2ecf_A 345 LDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKA--------GLAYFRAGIESARESQIYAVPLQG 415 (741)
T ss_dssp CTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTT--------TEEEEEECSSCTTCBEEEEEETTC
T ss_pred CCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCC--------CEEEEEEeCCCCceEEEEEEEcCC
Confidence 99999888887 78788887763335 77788888888887 599995 33445666666 899999864 4
Q ss_pred eEEEeeecCCCeeEEEEecCCCEEEEEecC----CcEEEEeecCc
Q 038802 306 KVTHSMRFPAPLMSVAFSPDCMTRVIGTSN----GTIFAGRRKKK 346 (532)
Q Consensus 306 ~~~~~~~~~~~v~~~~~s~~~~~l~~g~~d----g~i~iw~~~~~ 346 (532)
.....+.....+.+++|+|||++++....+ +.+++|+...+
T Consensus 416 ~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 416 GQPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp CCCEECCCSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred CCeeecccCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 444555556678899999999998876554 46888887544
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=9.6e-25 Score=232.64 Aligned_cols=280 Identities=11% Similarity=0.052 Sum_probs=206.1
Q ss_pred CeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCc---eeEEEEEccCCCEEEEEcCC---------CCEEEE
Q 038802 53 SINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKD---VVTCSSFRPDGSLLAASDLS---------GLIQVF 120 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~g~~d---------g~i~iw 120 (532)
.+.+++|+|||+++++ +.||.|++||..+++....+..|.. .|.+++|+|||++|++++.+ +.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4678999999997766 7899999999999988877777664 49999999999999998764 778899
Q ss_pred ECCCCceEEEec---CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCce----------------
Q 038802 121 DVKSRTPLRRLK---SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYV---------------- 181 (532)
Q Consensus 121 d~~~~~~~~~~~---~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v---------------- 181 (532)
|+.+++. ..+. +|...+..++|+| +++.|+.++. +.|++||+.+++.......+...+
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred ECCCCce-EeccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 9998876 3333 3455588999999 9999998886 799999999887766555444333
Q ss_pred --EEEEEeCCCCCEEEEEeCCC----------------------------------eEEEEEcccCCceeEEEec-----
Q 038802 182 --RCGDCSPVNGDMFVTGSYDH----------------------------------TVKLWDVRVENSKSVMEVN----- 220 (532)
Q Consensus 182 --~~i~~~~~~~~~l~s~s~dg----------------------------------~i~iwd~~~~~~~~~~~~~----- 220 (532)
.+++|+| +++.|++++.|+ .|++||+.+++....+...
T Consensus 174 ~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 174 THIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred CcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 7899999 999999887653 7999999876543333211
Q ss_pred CCCcEEEEEEecCCCEEEEEc-C----CeEEEEEccCCCeeeEEcc-CCCcce----EEEEEeccCCCCCccccccEEEE
Q 038802 221 HGKPIEDVMFLPSGGLIATAG-G----NSVKIWDLIGGGKMVYSME-SHNKTV----TSVCVGRVGNESGEEAMQYRILS 290 (532)
Q Consensus 221 ~~~~v~~i~~~~~~~~l~~~~-d----~~i~iwd~~~~~~~~~~~~-~~~~~i----~~~~~~~~~~~~~~~~~~~~l~s 290 (532)
+...+.+++|+|||+++++.. . ..|.+||+.++ ++...+. .+...+ ..++|+|+| ..+++.
T Consensus 253 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~~spdg--------~~l~~~ 323 (723)
T 1xfd_A 253 REYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG-VCTKKHEDESEAWLHRQNEEPVFSKDG--------RKFFFI 323 (723)
T ss_dssp SSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC-CEEEEEEEECSSCCCCCCCCCEECTTS--------CSEEEE
T ss_pred ccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC-cceEEEEeccCCEEeccCCCceEcCCC--------CeEEEE
Confidence 256789999999999887664 2 47999999877 4444332 233333 378999995 233333
Q ss_pred -EecCC------eEEEEE-CCCce--EEEeee-cCCCeeE-EEEecCCCEEEEEecC---CcEEEEeecCc
Q 038802 291 -VALDG------YMKVFD-YGKMK--VTHSMR-FPAPLMS-VAFSPDCMTRVIGTSN---GTIFAGRRKKK 346 (532)
Q Consensus 291 -~~~dg------~i~iwd-~~~~~--~~~~~~-~~~~v~~-~~~s~~~~~l~~g~~d---g~i~iw~~~~~ 346 (532)
+..++ .|.+|| ..++. +...+. ....+.. ++|+|||+.|+..+.+ +.+.+|+++..
T Consensus 324 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 324 RAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp EEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred EecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 55677 577777 44444 133333 3344554 6999999999766655 78999998754
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=1.3e-22 Score=195.42 Aligned_cols=281 Identities=10% Similarity=0.098 Sum_probs=196.7
Q ss_pred CCCCcccccccC-----CCccCccccCeeEEEEcCCCCeEEEEEeC-CeEEEEeCC--Cce--EEEEeeccCceeEEEEE
Q 038802 32 QTPESKYWSSFK-----PHQIPGLVSSINSIVFSPTTSHLFAATHS-ASLTLFSSQ--TLE--KHSAISSFKDVVTCSSF 101 (532)
Q Consensus 32 ~~~~~~~w~~~~-----~~~~~~h~~~V~~i~~sp~~~~l~~~~~d-~~v~i~~~~--~~~--~~~~~~~~~~~v~~~~~ 101 (532)
.++.+.+|+.-. ......|...+.+++|+|+++++++++.+ +.|.+|++. +++ .+..+..+. .+.+++|
T Consensus 13 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 91 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHIST 91 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEE
T ss_pred CCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEE
Confidence 356677886521 11224577789999999999999998886 899999987 444 334444433 7889999
Q ss_pred ccCCCEEEEEc-CCCCEEEEECC---CCceEEEecCCCCCEEEEEeecCCCcEEEEEe-CCCeEEEEECCC-CeEEE---
Q 038802 102 RPDGSLLAASD-LSGLIQVFDVK---SRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGG-DDGIVKFWDVAG-ESVVL--- 172 (532)
Q Consensus 102 ~~~~~~l~~g~-~dg~i~iwd~~---~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s-~dg~i~iwd~~~-~~~~~--- 172 (532)
+|++++|++++ .++.|.+||+. .......+..+ ..+.+++|+| ++..+++++ .++.|.+||+.+ ++...
T Consensus 92 s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 169 (343)
T 1ri6_A 92 DHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQDP 169 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEE
T ss_pred cCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeecc
Confidence 99999887665 48889999994 33445555543 4588999999 887777777 899999999987 54432
Q ss_pred -ecc-CCCCceEEEEEeCCCCCEEEE-EeCCCeEEEEEccc--CCceeEEEe---c----CCCcEEEEEEecCCCEEEE-
Q 038802 173 -DLF-GHKDYVRCGDCSPVNGDMFVT-GSYDHTVKLWDVRV--ENSKSVMEV---N----HGKPIEDVMFLPSGGLIAT- 239 (532)
Q Consensus 173 -~~~-~~~~~v~~i~~~~~~~~~l~s-~s~dg~i~iwd~~~--~~~~~~~~~---~----~~~~v~~i~~~~~~~~l~~- 239 (532)
... .....+.+++|+| +++++++ +..++.|.+||+.. +........ . ....+.+++|+|+|+++++
T Consensus 170 ~~~~~~~~~~~~~~~~~p-dg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~ 248 (343)
T 1ri6_A 170 AEVTTVEGAGPRHMVFHP-NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYAC 248 (343)
T ss_dssp EEEECSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEE
T ss_pred cccccCCCCCcceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEE
Confidence 222 2345788999999 8886654 45889999999954 322211111 1 1235678999999987764
Q ss_pred Ec-CCeEEEEEccC--C-CeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEe-cCCeEEEE--ECCCce--EEEe
Q 038802 240 AG-GNSVKIWDLIG--G-GKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVA-LDGYMKVF--DYGKMK--VTHS 310 (532)
Q Consensus 240 ~~-d~~i~iwd~~~--~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~-~dg~i~iw--d~~~~~--~~~~ 310 (532)
+. ++.|.+||+.. + .+.+..+..+.. +.+++|+|+ +.++++++ .++.|.+| |..+++ .+..
T Consensus 249 ~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~d---------g~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 249 DRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHS---------GKYLIAAGQKSHHISVYEIVGEQGLLHEKGR 318 (343)
T ss_dssp ETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTT---------SSEEEEECTTTCEEEEEEEETTTTEEEEEEE
T ss_pred ecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCC---------CCEEEEecCCCCeEEEEEEcCCCceeeEccc
Confidence 43 78999999973 2 134444544444 889999999 45666666 68999999 444654 3444
Q ss_pred eecCCCeeEEEEecCC
Q 038802 311 MRFPAPLMSVAFSPDC 326 (532)
Q Consensus 311 ~~~~~~v~~~~~s~~~ 326 (532)
+.......+++|.|+.
T Consensus 319 ~~~g~~p~~i~~~~~~ 334 (343)
T 1ri6_A 319 YAVGQGPMWVVVNAHE 334 (343)
T ss_dssp EECSSSCCEEEEEEEC
T ss_pred cccCCCCeeEEEEccc
Confidence 5555567788888764
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=7.7e-23 Score=226.15 Aligned_cols=277 Identities=10% Similarity=-0.026 Sum_probs=221.4
Q ss_pred cccCeeEEEEc-CCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCc-eeEEEEEccCCCEEEEEcCCCCEE-EEECCCCc
Q 038802 50 LVSSINSIVFS-PTTSHLFAATHSASLTLFSSQTLEKHSAISSFKD-VVTCSSFRPDGSLLAASDLSGLIQ-VFDVKSRT 126 (532)
Q Consensus 50 h~~~V~~i~~s-p~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~g~~dg~i~-iwd~~~~~ 126 (532)
|...+.+++|+ |||+++++++ ++.+.+|+..++... .+..|.. .+.+++|+ ||+.|++++.++.+. +|++.+++
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK 370 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC
Confidence 44579999999 9999999887 799999999877654 4666777 89999999 999999988888888 89998766
Q ss_pred eEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCC-----
Q 038802 127 PLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDH----- 201 (532)
Q Consensus 127 ~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg----- 201 (532)
.. .+.+|...+.+++|+| ++..|++++.++.|++||+.+++......+|...+.+++|+| ++++|++++.++
T Consensus 371 ~~-~l~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 371 AE-KFEENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISD-NSRFIAYGFPLKHGETD 447 (1045)
T ss_dssp EE-ECCCCCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECT-TSCEEEEEEEECSSTTC
T ss_pred ce-EecCCccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECC-CCCeEEEEecCcccccc
Confidence 54 4447888999999999 999999999999999999999988877778999999999999 999998887654
Q ss_pred -----eEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCC---------------------
Q 038802 202 -----TVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGG--------------------- 254 (532)
Q Consensus 202 -----~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~--------------------- 254 (532)
.|++||+.+++ ......|...+.+++|+|+|+.|+.++ ++...+|+.....
T Consensus 448 ~~~~~~i~l~d~~~g~--~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRK--IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNP 525 (1045)
T ss_dssp SCCEEEEEEEETTTTE--EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCG
T ss_pred CCCCCeEEEEECCCCc--EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCc
Confidence 89999998743 333346777889999999999888877 5555556532110
Q ss_pred ---------------------eeeEEccCCCcceEEEEEeccCCCCCccccccEEEE-------------EecCCeEEEE
Q 038802 255 ---------------------KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILS-------------VALDGYMKVF 300 (532)
Q Consensus 255 ---------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s-------------~~~dg~i~iw 300 (532)
..+..+..|.+.+..++++|+ +.++++ .+....|.+|
T Consensus 526 ~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~d---------g~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 596 (1045)
T 1k32_A 526 TKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLES---------SILIYSVPVHGEFAAYYQGAPEKGVLLKY 596 (1045)
T ss_dssp GGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSS---------EEEEEECCCCCSHHHHHHCCCCCEEEEEE
T ss_pred cccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCC---------CeEEEEecccCcccccccccCCCceEEEE
Confidence 112334446677889999998 555664 1235678999
Q ss_pred ECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcc
Q 038802 301 DYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKE 347 (532)
Q Consensus 301 d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~ 347 (532)
|+.+++..... ..+.+++|||||++|++++.+ .|++|++.+++
T Consensus 597 d~~~~~~~~l~---~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 597 DVKTRKVTEVK---NNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp ETTTCCEEEEE---EEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred ECCCCcEEEee---cCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence 99988764333 568899999999999998766 89999998776
No 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=4.7e-23 Score=213.73 Aligned_cols=269 Identities=12% Similarity=0.022 Sum_probs=202.1
Q ss_pred cccCeeEEEEcCCCCeEEEEEe-CCeEEEEeCCCceEEEEeeccC-ceeEEEEEccCCCEEEEEcC---CCCEEEEECCC
Q 038802 50 LVSSINSIVFSPTTSHLFAATH-SASLTLFSSQTLEKHSAISSFK-DVVTCSSFRPDGSLLAASDL---SGLIQVFDVKS 124 (532)
Q Consensus 50 h~~~V~~i~~sp~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~g~~---dg~i~iwd~~~ 124 (532)
+..+|++++|+|||+.||+++. ||.+.||++.+++.. .+..|. ..+.+++|+|| +++++++. +....+|.+..
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 3558999999999999999887 999999998766554 455555 68999999999 77777764 45566665532
Q ss_pred ---CceEEEecCCCCCEEEEEeecCCC-cEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCC
Q 038802 125 ---RTPLRRLKSHTRPVRFVKYPFLDK-LHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYD 200 (532)
Q Consensus 125 ---~~~~~~~~~h~~~i~~~~~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~d 200 (532)
+... .+..+. .+...+|+| ++ ..+++.+.++.+.+||+.+++.......+. .+++|+| +|+.+++++.|
T Consensus 98 ~~~g~~~-~l~~~~-~~~~~~~s~-dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~sp-DG~~la~~~~~ 170 (582)
T 3o4h_A 98 SRPGEEQ-RLEAVK-PMRILSGVD-TGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDI-RGDLIAGLGFF 170 (582)
T ss_dssp TSTTCCE-ECTTSC-SBEEEEEEE-CSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEE-ETTEEEEEEEE
T ss_pred cCCCccc-cccCCC-CceeeeeCC-CCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECC-CCCEEEEEEEc
Confidence 3322 443222 345668888 54 344444455555699999887665544333 7899999 99999988877
Q ss_pred ----CeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CC--eEEEEEccCCCeeeEEccCCCcceEEEE--
Q 038802 201 ----HTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GN--SVKIWDLIGGGKMVYSMESHNKTVTSVC-- 271 (532)
Q Consensus 201 ----g~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~i~~~~-- 271 (532)
+.|++||+.+++.. ....+...+.+++|+|||+.|+++. ++ .|++||+.++ ... .+..|...+..+.
T Consensus 171 ~~~~~~i~~~d~~~g~~~--~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~-~~~-~~~~~~~~~~~~~~~ 246 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGLR--VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG-SVE-DLELPSKDFSSYRPT 246 (582)
T ss_dssp ETTEEEEEEEETTTCCCE--EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC-CEE-ECCCSCSHHHHHCCS
T ss_pred CCCCeEEEEEcCCCCCce--EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC-cEE-EccCCCcChhhhhhc
Confidence 78999999876544 2246778899999999999999766 67 8999999877 444 6777877777777
Q ss_pred ------EeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCc---EEEEe
Q 038802 272 ------VGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGT---IFAGR 342 (532)
Q Consensus 272 ------~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~---i~iw~ 342 (532)
|+|+ +.++++++.||.+++|++ ++... ...+.+.+++|+ +|+.+++++.+.. +++|+
T Consensus 247 ~~~~~~~spd---------g~~~~~~~~~g~~~l~~~--g~~~~--~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 247 AITWLGYLPD---------GRLAVVARREGRSAVFID--GERVE--APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp EEEEEEECTT---------SCEEEEEEETTEEEEEET--TEEEC--CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred cccceeEcCC---------CcEEEEEEcCCcEEEEEE--CCeec--cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 9999 568899999999999999 66554 234678899999 9999999888754 66776
Q ss_pred ecC
Q 038802 343 RKK 345 (532)
Q Consensus 343 ~~~ 345 (532)
..+
T Consensus 313 ~~~ 315 (582)
T 3o4h_A 313 SGE 315 (582)
T ss_dssp TCC
T ss_pred CCC
Confidence 554
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=1.5e-22 Score=195.69 Aligned_cols=277 Identities=10% Similarity=0.014 Sum_probs=197.4
Q ss_pred EEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccC-ceeEEEEEccCCCEEE-EEcCCCCEEEEECCCCceEEEecC
Q 038802 56 SIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFK-DVVTCSSFRPDGSLLA-ASDLSGLIQVFDVKSRTPLRRLKS 133 (532)
Q Consensus 56 ~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~~~~~ 133 (532)
.+++++++.++++++.++.|.+||..+++....+..+. ..+..++|+|+|++++ ++..++.|.+||+.+++....+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45688888899999999999999999999888876543 2578899999998665 556789999999999988877663
Q ss_pred CC------CCEEEEEeecCCCcEEEEEeCC------------CeEEEEECCCCeE---EEeccCCCCceEEEEEeCCCCC
Q 038802 134 HT------RPVRFVKYPFLDKLHLVSGGDD------------GIVKFWDVAGESV---VLDLFGHKDYVRCGDCSPVNGD 192 (532)
Q Consensus 134 h~------~~i~~~~~~~~~~~~l~s~s~d------------g~i~iwd~~~~~~---~~~~~~~~~~v~~i~~~~~~~~ 192 (532)
+. ..+.+++|+| +++++++++.+ +.|.+||+.+++. +..+. +...+.+++|+| +++
T Consensus 84 ~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~-dg~ 160 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAAD-DGS 160 (349)
T ss_dssp CCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECT-TSC
T ss_pred ccccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECC-CCc
Confidence 32 2377899999 88888888865 8999999987432 23333 334688899999 888
Q ss_pred EEEEEeCCCeEEEEEcccCCceeEEEecCCC-----------------------cEEEEEEecCCCEEEEEc--CCeEEE
Q 038802 193 MFVTGSYDHTVKLWDVRVENSKSVMEVNHGK-----------------------PIEDVMFLPSGGLIATAG--GNSVKI 247 (532)
Q Consensus 193 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-----------------------~v~~i~~~~~~~~l~~~~--d~~i~i 247 (532)
+++++. .|.+||+.+++........... ....+++++++....... ...+..
T Consensus 161 -l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 161 -LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp -EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred -EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 555543 4999999886655444322100 334566665542211111 011222
Q ss_pred EEccCCCeeeEEccCCCcceEEEEEec-cCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecCCCeeEEEEecCC
Q 038802 248 WDLIGGGKMVYSMESHNKTVTSVCVGR-VGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDC 326 (532)
Q Consensus 248 wd~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~ 326 (532)
+|..++......+..+...+.+++++| + +.+++++ ++.|.+||+.+++.+..+.....+.+++|+|+|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~d---------g~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg 306 (349)
T 1jmx_B 238 VDLKTGKTHTQEFADLTELYFTGLRSPKD---------PNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKG 306 (349)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEECSSC---------TTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSS
T ss_pred EeccCCcEEecccccCCCcceeeEecCCC---------CCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCC
Confidence 343333222222223556788999999 8 5667776 889999999999998888877788999999999
Q ss_pred CEEEEEecCCcEEEEeecCcccc
Q 038802 327 MTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 327 ~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
++|++++.++.|.+|+..+.+..
T Consensus 307 ~~l~~~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 307 DKLYLGGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp SCEEEESBSSEEEEEETTTTEEE
T ss_pred CEEEEecCCCeEEEEecccccee
Confidence 99999999999999999877644
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=9.4e-22 Score=190.11 Aligned_cols=269 Identities=13% Similarity=0.130 Sum_probs=187.0
Q ss_pred eEEEEEe----CCeEEEEeC--CCceEEE-EeeccCceeEEEEEccCCCEEEEEcC---CCCEEEEECCCCc--eEEEec
Q 038802 65 HLFAATH----SASLTLFSS--QTLEKHS-AISSFKDVVTCSSFRPDGSLLAASDL---SGLIQVFDVKSRT--PLRRLK 132 (532)
Q Consensus 65 ~l~~~~~----d~~v~i~~~--~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~---dg~i~iwd~~~~~--~~~~~~ 132 (532)
.+++|+. ++.|.+|++ .+++... ....+...+..++|+|||+ |++++. ++.|.+|++.++. .+..+.
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~ 82 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVV 82 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeee
Confidence 3555543 345666654 4565433 3344556788899999999 555443 6899999997665 344445
Q ss_pred CCCCCEEEEEeecCCCcEEEEEe-CCCeEEEEECCC-C--eEEEeccC---------CCCceEEEEEeCCCCCEEEEEeC
Q 038802 133 SHTRPVRFVKYPFLDKLHLVSGG-DDGIVKFWDVAG-E--SVVLDLFG---------HKDYVRCGDCSPVNGDMFVTGSY 199 (532)
Q Consensus 133 ~h~~~i~~~~~~~~~~~~l~s~s-~dg~i~iwd~~~-~--~~~~~~~~---------~~~~v~~i~~~~~~~~~l~s~s~ 199 (532)
.+...+..++|+| ++++|++++ .++.|.+|++.. + ..+..+.. +...+.+++|+| ++++++++..
T Consensus 83 ~~~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~ 160 (347)
T 3hfq_A 83 APGTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLG 160 (347)
T ss_dssp EESCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETT
T ss_pred cCCCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCC
Confidence 5677888999999 888888877 789999999962 2 23333321 123488899999 8887777777
Q ss_pred CCeEEEEEcc-cCCceeEE--EecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccC-CCee--eEEccCCC------c
Q 038802 200 DHTVKLWDVR-VENSKSVM--EVNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIG-GGKM--VYSMESHN------K 265 (532)
Q Consensus 200 dg~i~iwd~~-~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~-~~~~--~~~~~~~~------~ 265 (532)
++.|.+||+. ++...... .......+..++|+|+|+++++++ ++.|.+|++.. .+.. ...+.... .
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHN 240 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCC
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCC
Confidence 8999999998 33322222 223344678899999999666654 78999999874 1232 22222222 4
Q ss_pred ceEEEEEeccCCCCCccccccEE-EEEecCCeEEEEECCC---ceEEEeeec-CCCeeEEEEecCCCEEEEEecC-CcEE
Q 038802 266 TVTSVCVGRVGNESGEEAMQYRI-LSVALDGYMKVFDYGK---MKVTHSMRF-PAPLMSVAFSPDCMTRVIGTSN-GTIF 339 (532)
Q Consensus 266 ~i~~~~~~~~~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~---~~~~~~~~~-~~~v~~~~~s~~~~~l~~g~~d-g~i~ 339 (532)
.+..++|+|++ .++ ++...++.|.+|++.. .+.+..+.. ...+.+++|+|||++|++++.+ +.|.
T Consensus 241 ~~~~i~~spdG---------~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 311 (347)
T 3hfq_A 241 GAAAIRLSHDG---------HFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNAT 311 (347)
T ss_dssp EEEEEEECTTS---------CEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEE
T ss_pred cceeEEECCCC---------CEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEE
Confidence 58899999994 555 5666789999999972 345555543 4568999999999998888765 8999
Q ss_pred EEeecC
Q 038802 340 AGRRKK 345 (532)
Q Consensus 340 iw~~~~ 345 (532)
+|+++.
T Consensus 312 v~~~d~ 317 (347)
T 3hfq_A 312 LYARDL 317 (347)
T ss_dssp EEEECT
T ss_pred EEEEeC
Confidence 997754
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=5e-22 Score=190.58 Aligned_cols=266 Identities=10% Similarity=0.112 Sum_probs=190.9
Q ss_pred CCCCCcccccccCCCc---cCccccCeeEEEEcCCCCeEEEEEe-CCeEEEEeCCCceE-EEEeeccCceeEEEEEccCC
Q 038802 31 SQTPESKYWSSFKPHQ---IPGLVSSINSIVFSPTTSHLFAATH-SASLTLFSSQTLEK-HSAISSFKDVVTCSSFRPDG 105 (532)
Q Consensus 31 ~~~~~~~~w~~~~~~~---~~~h~~~V~~i~~sp~~~~l~~~~~-d~~v~i~~~~~~~~-~~~~~~~~~~v~~~~~~~~~ 105 (532)
+....+.+|+.-.... +..+...+ +++|+|+++++++++. ++.|.+||..+++. ...+..+..+..+++|+|+|
T Consensus 17 ~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg 95 (331)
T 3u4y_A 17 QHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDD 95 (331)
T ss_dssp GGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTS
T ss_pred cCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCC
Confidence 3456778887544322 23345556 9999999998877776 78999999999887 77777777776669999999
Q ss_pred CEEEEEcCCC---CEEEEECCCCceEEEecCCCCCEEEEEeecCCCcE-EEEEeCCCe-EEEEECCCCeEE----EeccC
Q 038802 106 SLLAASDLSG---LIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLH-LVSGGDDGI-VKFWDVAGESVV----LDLFG 176 (532)
Q Consensus 106 ~~l~~g~~dg---~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~-l~s~s~dg~-i~iwd~~~~~~~----~~~~~ 176 (532)
++++++..++ .|.+||+.+++.+..+..+ ....+++|+| ++++ ++++..++. |.+|++.....+ .....
T Consensus 96 ~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~ 173 (331)
T 3u4y_A 96 QFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISP-NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFIS 173 (331)
T ss_dssp SEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECT-TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEEC
T ss_pred CEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECC-CCCEEEEEecCCCceEEEEEECCCCcEeecCCcccc
Confidence 9999665553 8999999999888877644 4568999999 7764 455566688 999998754322 12223
Q ss_pred CCCceEEEEEeCCCCCEE-EEEeCCCeEEEEEcccCCce-eEEEecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccC
Q 038802 177 HKDYVRCGDCSPVNGDMF-VTGSYDHTVKLWDVRVENSK-SVMEVNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIG 252 (532)
Q Consensus 177 ~~~~v~~i~~~~~~~~~l-~s~s~dg~i~iwd~~~~~~~-~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~ 252 (532)
......+++|+| +++++ +++..++.|.+||+.+++.. ..........+..++|+|+|++++++. ++.|.+||+.+
T Consensus 174 ~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 174 GGTRPFNITFTP-DGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp SSSSEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred CCCCccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 445678999999 88855 55556899999999886651 133334557788999999999776665 57899999987
Q ss_pred CCee--eEEccCC----Ccc---eEEEEEeccCCCCCccccccEE-EEEecCCeEEEEECCCceEEEe
Q 038802 253 GGKM--VYSMESH----NKT---VTSVCVGRVGNESGEEAMQYRI-LSVALDGYMKVFDYGKMKVTHS 310 (532)
Q Consensus 253 ~~~~--~~~~~~~----~~~---i~~~~~~~~~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~ 310 (532)
+ +. +..+..+ ... ...++|+|++ .++ +++..++.|.+||+.+......
T Consensus 253 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg---------~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 253 G-TLSFVKSFGHGLLIDPRPLFGANQMALNKTE---------TKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp T-EEEEEEEEECCCCCCCGGGTTCCCEEECTTS---------SEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred C-ceeeecccccccccCCCCcccccceEECCCC---------CEEEEecCCCCcEEEEEecCCcccce
Confidence 6 44 2222211 222 2458999994 555 5555677999999988665443
No 146
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=1.6e-22 Score=200.74 Aligned_cols=213 Identities=18% Similarity=0.165 Sum_probs=164.1
Q ss_pred CCcccccccCCCccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCc----------eEEE-----EeeccCceeEE
Q 038802 34 PESKYWSSFKPHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTL----------EKHS-----AISSFKDVVTC 98 (532)
Q Consensus 34 ~~~~~w~~~~~~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~----------~~~~-----~~~~~~~~v~~ 98 (532)
..+++|+... .+ ....++.+++++++.++++++.++ +++|+.... .... ....+...|++
T Consensus 23 ~~vri~~~~~--~~--~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 97 (434)
T 2oit_A 23 KKVRIFDSPE--EL--PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHH 97 (434)
T ss_dssp CEEECSCCCS--SC--CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEE
T ss_pred eeEEecCCcc--cc--CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccE
Confidence 3566665431 12 344689999999999999998877 888864211 0111 01234567999
Q ss_pred EEEccCCCEEE----EEcCCCCEEEEECCCC--------c---eEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEE
Q 038802 99 SSFRPDGSLLA----ASDLSGLIQVFDVKSR--------T---PLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFW 163 (532)
Q Consensus 99 ~~~~~~~~~l~----~g~~dg~i~iwd~~~~--------~---~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iw 163 (532)
++|+|+|++|+ +|+.|+.|++||+.++ + .+..+.+|...|.+++|+|.++.+|++++.||+|++|
T Consensus 98 l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 98 LALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177 (434)
T ss_dssp EEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred EEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence 99999999999 7888999999998654 1 2455677999999999999448899999999999999
Q ss_pred ECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEe------cCCCcEEEEEEecCCCEE
Q 038802 164 DVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEV------NHGKPIEDVMFLPSGGLI 237 (532)
Q Consensus 164 d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~------~~~~~v~~i~~~~~~~~l 237 (532)
|++++.......+|...|.+++|+| ++++|++|+.||+|++||++ +........ .|...|.+++|++++.++
T Consensus 178 D~~~~~~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 178 QVTETVKVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EESSSEEEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred EcCCCcceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEE
Confidence 9999987777778999999999999 89999999999999999998 333333321 123489999999998888
Q ss_pred EEEc--CC------eEEEEEccCC
Q 038802 238 ATAG--GN------SVKIWDLIGG 253 (532)
Q Consensus 238 ~~~~--d~------~i~iwd~~~~ 253 (532)
++.+ +| .+++|+++..
T Consensus 256 ~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 256 IVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEccCCCccCCCCceEEEEeccC
Confidence 6654 43 3999999754
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=4.5e-23 Score=219.70 Aligned_cols=291 Identities=12% Similarity=0.072 Sum_probs=207.7
Q ss_pred CCCCCcccccccCCCc---cCcccc---CeeEEEEcCCCCeEEEEEeC---------CeEEEEeCCCceEEEEee---cc
Q 038802 31 SQTPESKYWSSFKPHQ---IPGLVS---SINSIVFSPTTSHLFAATHS---------ASLTLFSSQTLEKHSAIS---SF 92 (532)
Q Consensus 31 ~~~~~~~~w~~~~~~~---~~~h~~---~V~~i~~sp~~~~l~~~~~d---------~~v~i~~~~~~~~~~~~~---~~ 92 (532)
+.++.+.+|+.-.... +.+|.. .|.+++|||||++|++++.+ +.+++||+.+++. ..+. .|
T Consensus 34 ~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~ 112 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVS 112 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCC
T ss_pred eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccc
Confidence 4567889998654432 344544 49999999999999999864 7899999998875 3333 34
Q ss_pred CceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCE------------------EEEEeecCCCcEEEEE
Q 038802 93 KDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPV------------------RFVKYPFLDKLHLVSG 154 (532)
Q Consensus 93 ~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i------------------~~~~~~~~~~~~l~s~ 154 (532)
...+.+++|+|||+.||.++. +.|++||+.+++.......+...+ .+++|+| +++.|+++
T Consensus 113 ~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~ 190 (723)
T 1xfd_A 113 NAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYA 190 (723)
T ss_dssp SCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEE
T ss_pred cccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEE
Confidence 445889999999999999885 799999999888776666544433 7899999 99989888
Q ss_pred eCCC----------------------------------eEEEEECCCCeEEEeccCC------CCceEEEEEeCCCCCEE
Q 038802 155 GDDG----------------------------------IVKFWDVAGESVVLDLFGH------KDYVRCGDCSPVNGDMF 194 (532)
Q Consensus 155 s~dg----------------------------------~i~iwd~~~~~~~~~~~~~------~~~v~~i~~~~~~~~~l 194 (532)
+.|+ .|++||+.+++....+..+ ...+.+++|+| +++++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~Sp-Dg~~l 269 (723)
T 1xfd_A 191 AINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT-STKVA 269 (723)
T ss_dssp EEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESS-SSEEE
T ss_pred EECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeC-CCeEE
Confidence 7553 7999999988765555543 67889999999 89888
Q ss_pred EEEeC----CCeEEEEEcccCCceeEEEecCCCcEE----EEEEecCCCEEEEE--c-CC------eEEEEEccCCCe--
Q 038802 195 VTGSY----DHTVKLWDVRVENSKSVMEVNHGKPIE----DVMFLPSGGLIATA--G-GN------SVKIWDLIGGGK-- 255 (532)
Q Consensus 195 ~s~s~----dg~i~iwd~~~~~~~~~~~~~~~~~v~----~i~~~~~~~~l~~~--~-d~------~i~iwd~~~~~~-- 255 (532)
++.+. +..|++||+.+++........+...+. +++|+|+|+.|+.. . ++ .|.+||+..++.
T Consensus 270 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 349 (723)
T 1xfd_A 270 VTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSND 349 (723)
T ss_dssp EEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSC
T ss_pred EEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcc
Confidence 77653 357999999887665555444444443 78999999966653 3 56 466676323323
Q ss_pred eeEEccCCCcceEE-EEEeccCCCCCccccccEEEEEec-C--CeEEEEECCCc--eEEEeee----cCCCeeEEEEecC
Q 038802 256 MVYSMESHNKTVTS-VCVGRVGNESGEEAMQYRILSVAL-D--GYMKVFDYGKM--KVTHSMR----FPAPLMSVAFSPD 325 (532)
Q Consensus 256 ~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~l~s~~~-d--g~i~iwd~~~~--~~~~~~~----~~~~v~~~~~s~~ 325 (532)
+...+..+...+.. ++|+|+ +..|+..+. + +.+++|++... .....+. +...+..++|+||
T Consensus 350 ~~~~l~~~~~~~~~~~~~spd---------g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spd 420 (723)
T 1xfd_A 350 NIQSITSGDWDVTKILAYDEK---------GNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHS 420 (723)
T ss_dssp CCCBSCCSSSCEEEEEEEETT---------TTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTT
T ss_pred ceeEeecCCeEEEeeeEEcCC---------CCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCC
Confidence 13444433444544 699999 456655444 4 78999998642 1222232 3556889999999
Q ss_pred CCEEEEEec
Q 038802 326 CMTRVIGTS 334 (532)
Q Consensus 326 ~~~l~~g~~ 334 (532)
|++++....
T Consensus 421 g~~l~~~~~ 429 (723)
T 1xfd_A 421 MDFFLLKCE 429 (723)
T ss_dssp SSEEEEECC
T ss_pred CCEEEEEcc
Confidence 999887644
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=9.7e-23 Score=225.35 Aligned_cols=278 Identities=14% Similarity=0.096 Sum_probs=221.0
Q ss_pred ccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCC-ceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC
Q 038802 46 QIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQT-LEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS 124 (532)
Q Consensus 46 ~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 124 (532)
.+.+|.+.+.++.|+++ ..+++++.++.+.||.+.. +.....+..|. .+.+.+|+|||++|+++. ++.|.+||+..
T Consensus 198 ~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~ 274 (1045)
T 1k32_A 198 KIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDT 274 (1045)
T ss_dssp EEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTT
T ss_pred ECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCc
Confidence 34789999999999998 5566667778888887543 33445555555 356779999999999885 89999999954
Q ss_pred CceEEEecC-----------CCCCEEEEEee-cCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCC-ceEEEEEeCCCC
Q 038802 125 RTPLRRLKS-----------HTRPVRFVKYP-FLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKD-YVRCGDCSPVNG 191 (532)
Q Consensus 125 ~~~~~~~~~-----------h~~~i~~~~~~-~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~v~~i~~~~~~~ 191 (532)
. .+..+.. |...+.+++|+ | ++..+++++ ++.|.+|++.++.... +..|.. .+.+++|+ ++
T Consensus 275 ~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s--dg 348 (1045)
T 1k32_A 275 E-KIEKIEIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD--TK 348 (1045)
T ss_dssp C-CEEECCCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS--SE
T ss_pred e-EeeeeccCcccccccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc--CC
Confidence 4 3445554 33468899999 9 898888887 7899999998877554 566777 89999998 78
Q ss_pred CEEEEEeCCCeEE-EEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEE
Q 038802 192 DMFVTGSYDHTVK-LWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTS 269 (532)
Q Consensus 192 ~~l~s~s~dg~i~-iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~ 269 (532)
..+++++.++.+. +||+.++.... +. .+...+.+++|+|+|++|++++ ++.|++||+.++ +.......|...+.+
T Consensus 349 ~~l~~~s~~~~l~~~~d~~~~~~~~-l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg-~~~~~~~~~~~~v~~ 425 (1045)
T 1k32_A 349 VAFIHGTREGDFLGIYDYRTGKAEK-FE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG-KPTVIERSREAMITD 425 (1045)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEE-CC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEEECSSSCCCC
T ss_pred CeEEEEECCCceEEEEECCCCCceE-ec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCC-ceEEeccCCCCCccc
Confidence 8888888888888 99987754332 22 6778899999999999999888 789999999877 566666688889999
Q ss_pred EEEeccCCCCCccccccEEEEEecCC----------eEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCcEE
Q 038802 270 VCVGRVGNESGEEAMQYRILSVALDG----------YMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIF 339 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~s~~~dg----------~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~ 339 (532)
++|+|+ +.+|++++.++ .|++||+.+++......+...+.+++|+|||++|++++.++...
T Consensus 426 ~~~SpD---------G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~ 496 (1045)
T 1k32_A 426 FTISDN---------SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDP 496 (1045)
T ss_dssp EEECTT---------SCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCC
T ss_pred eEECCC---------CCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCc
Confidence 999999 56777776654 89999999988555445777889999999999999999988877
Q ss_pred EEeec
Q 038802 340 AGRRK 344 (532)
Q Consensus 340 iw~~~ 344 (532)
+|+..
T Consensus 497 ~~~~~ 501 (1045)
T 1k32_A 497 SPDRV 501 (1045)
T ss_dssp EECSS
T ss_pred Ccchh
Confidence 77654
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=1.4e-22 Score=190.62 Aligned_cols=251 Identities=17% Similarity=0.145 Sum_probs=188.4
Q ss_pred CCCCCcccccccCC--CccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCC-ceEEEEeecc-CceeEEEEEccCCC
Q 038802 31 SQTPESKYWSSFKP--HQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQT-LEKHSAISSF-KDVVTCSSFRPDGS 106 (532)
Q Consensus 31 ~~~~~~~~w~~~~~--~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~-~~~~~~~~~~-~~~v~~~~~~~~~~ 106 (532)
..++.+.+|+.-.. ..+..|.+.|.+++|+|+++++++++ ++.|++||+.+ ++.......+ ...+.+++|+|+++
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 97 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA 97 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS
T ss_pred CcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCC
Confidence 46678888986443 34577899999999999999988876 78999999998 8777666665 36889999999999
Q ss_pred EEEEEc--CCCCEEEEE--CCCCceEEEecCCCCCEEEEEeecCCCcEEE-EEeCCCeEEEEECCC-CeEEEeccCCCCc
Q 038802 107 LLAASD--LSGLIQVFD--VKSRTPLRRLKSHTRPVRFVKYPFLDKLHLV-SGGDDGIVKFWDVAG-ESVVLDLFGHKDY 180 (532)
Q Consensus 107 ~l~~g~--~dg~i~iwd--~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~-s~s~dg~i~iwd~~~-~~~~~~~~~~~~~ 180 (532)
+|++++ .++...||. ..++. ...+..+. .+.+++|+| ++..++ +++.|+.+.+|+++. +.....+..+...
T Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 174 (297)
T 2ojh_A 98 LYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGR 174 (297)
T ss_dssp EEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSC
T ss_pred EEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECC-CCCEEEEEECCCCceEEEEEECCCCcceEcccCCCc
Confidence 999988 334555554 45444 44444333 489999999 777666 788899999998532 2334566678889
Q ss_pred eEEEEEeCCCCCEEEEEe-CCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C-----------CeEEE
Q 038802 181 VRCGDCSPVNGDMFVTGS-YDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G-----------NSVKI 247 (532)
Q Consensus 181 v~~i~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d-----------~~i~i 247 (532)
+.+++|+| +++.++.++ .++.+++|++............+...+.+++|+|+|++|++++ + +.|.+
T Consensus 175 ~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 175 NDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQL 253 (297)
T ss_dssp EEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEE
T ss_pred cccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEE
Confidence 99999999 888777665 5899999998733333333335677899999999999888876 4 46999
Q ss_pred EEccCCC-eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCC
Q 038802 248 WDLIGGG-KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDG 295 (532)
Q Consensus 248 wd~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg 295 (532)
||+.++. ..+..+.+|...+.+++|+|+ +.+|++++.+.
T Consensus 254 ~d~~~~~~~~~~~~~~~~~~~~~~~~spd---------g~~l~~~~~~~ 293 (297)
T 2ojh_A 254 MDMDGGNVETLFDLFGGQGTMNSPNWSPD---------GDEFAYVRYFP 293 (297)
T ss_dssp EETTSCSCEEEEEEEESTTTSCSCCBCTT---------SSEEEEEEECC
T ss_pred EecCCCCceeeeccCCCCcccccceECCC---------CCEEEEEEecc
Confidence 9998763 234445578888999999999 56677666553
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=2.1e-22 Score=213.88 Aligned_cols=287 Identities=10% Similarity=0.073 Sum_probs=195.2
Q ss_pred CcccccccCCCccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEE-EEeeccC-----------------cee
Q 038802 35 ESKYWSSFKPHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKH-SAISSFK-----------------DVV 96 (532)
Q Consensus 35 ~~~~w~~~~~~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~-~~~~~~~-----------------~~v 96 (532)
.-++|..|.+.. +..+.|. +..+++++.++ | +||..+++.. ..+..+. ..|
T Consensus 16 ~~~~~~~~~~~~-------~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v 84 (706)
T 2z3z_A 16 GGKEFYNFYPEY-------VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPS 84 (706)
T ss_dssp -------------------CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCC
T ss_pred Cccccccccccc-------CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCc
Confidence 345666555443 3457777 56677777777 8 9999998873 3443333 469
Q ss_pred EEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCC-----CeEE
Q 038802 97 TCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAG-----ESVV 171 (532)
Q Consensus 97 ~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~-----~~~~ 171 (532)
.+++|+|| +.++.+. ++.|++||+.+++... +..+...+.+++|+| +++.|+++ .|+.|++||+.+ ++..
T Consensus 85 ~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 85 FRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp EEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCCCE
T ss_pred eeEEECCC-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCCcE
Confidence 99999999 6666554 5999999999876544 445677788999999 88888885 679999999998 7776
Q ss_pred EeccCCCCc--------------eEEEEEeCCCCCEEEEEe---------------------------------CCCeEE
Q 038802 172 LDLFGHKDY--------------VRCGDCSPVNGDMFVTGS---------------------------------YDHTVK 204 (532)
Q Consensus 172 ~~~~~~~~~--------------v~~i~~~~~~~~~l~s~s---------------------------------~dg~i~ 204 (532)
.....+... +.++.|+| ++++|++++ .+..|+
T Consensus 160 ~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 238 (706)
T 2z3z_A 160 AVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG 238 (706)
T ss_dssp ESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred EeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence 655444443 47899999 999999987 446799
Q ss_pred EEEcccCCceeEEEe-cCCCcEEEEEEecCCCEEEEEc-CC-----eEEEEEccCCCeeeEEcc-CCCc---ceEEEEEe
Q 038802 205 LWDVRVENSKSVMEV-NHGKPIEDVMFLPSGGLIATAG-GN-----SVKIWDLIGGGKMVYSME-SHNK---TVTSVCVG 273 (532)
Q Consensus 205 iwd~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~-d~-----~i~iwd~~~~~~~~~~~~-~~~~---~i~~~~~~ 273 (532)
+||+.+++....... .+...+.+++|+|+|+.|++++ ++ .|.+||+.++........ .+.. .+.++.|+
T Consensus 239 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~s 318 (706)
T 2z3z_A 239 IYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFL 318 (706)
T ss_dssp EEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEEC
T ss_pred EEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceee
Confidence 999987544333221 4667899999999999888866 54 899999987622222221 1222 24678999
Q ss_pred c--cCCCCCccccccEEEEEecCCeEEEEECC-CceEEEeee-cCCCeeE-EEEecCCCEEEEEecC-C----cEEEEee
Q 038802 274 R--VGNESGEEAMQYRILSVALDGYMKVFDYG-KMKVTHSMR-FPAPLMS-VAFSPDCMTRVIGTSN-G----TIFAGRR 343 (532)
Q Consensus 274 ~--~~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~-~~~~v~~-~~~s~~~~~l~~g~~d-g----~i~iw~~ 343 (532)
| + +.++++++.||.+++|++. ++.....+. +...+.+ ++|+|+|+.|+.++.+ + .|+.|+.
T Consensus 319 p~~d---------g~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 319 PGSN---------NQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp TTCS---------SEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred cCCC---------CEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 9 7 5688999999999999876 555555554 5556776 7999999988766554 4 5666666
Q ss_pred cCcc
Q 038802 344 KKKE 347 (532)
Q Consensus 344 ~~~~ 347 (532)
.+++
T Consensus 390 ~~~~ 393 (706)
T 2z3z_A 390 KGGK 393 (706)
T ss_dssp TCCC
T ss_pred CCCC
Confidence 5543
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=2.5e-21 Score=185.89 Aligned_cols=264 Identities=13% Similarity=0.031 Sum_probs=197.0
Q ss_pred CCCCcccccccCCCcc--Ccccc---CeeEEEEcCCCCeEEEEE-eCCeEEEEeCCCceEEEEeecc-----CceeEEEE
Q 038802 32 QTPESKYWSSFKPHQI--PGLVS---SINSIVFSPTTSHLFAAT-HSASLTLFSSQTLEKHSAISSF-----KDVVTCSS 100 (532)
Q Consensus 32 ~~~~~~~w~~~~~~~~--~~h~~---~V~~i~~sp~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~-----~~~v~~~~ 100 (532)
.++.+.+|+......+ ..+.. .+.+++|+|+++++++++ .++.|.+||..+++....+... ...+.+++
T Consensus 9 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (337)
T 1pby_B 9 RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAA 88 (337)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEE
T ss_pred CCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceE
Confidence 3456677775433222 11222 488999999998776554 4689999999998887766532 22677899
Q ss_pred EccCCCEEEEEc------------CCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC
Q 038802 101 FRPDGSLLAASD------------LSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE 168 (532)
Q Consensus 101 ~~~~~~~l~~g~------------~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~ 168 (532)
|+|+|+++++++ .++.|.+||+.+++.+..+.. ...+.+++|+| ++++++++ ++.|.+||+.++
T Consensus 89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~ 164 (337)
T 1pby_B 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWAR-DGSKLYGL--GRDLHVMDPEAG 164 (337)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECT-TSSCEEEE--SSSEEEEETTTT
T ss_pred ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECC-CCCEEEEe--CCeEEEEECCCC
Confidence 999999999885 579999999999888777764 45578889999 88878777 689999999999
Q ss_pred eEEEeccCCCCceEEEEEeCCCCCEEEEEeC-CC-----------------------eEEEEEcccCCceeEEEecCCCc
Q 038802 169 SVVLDLFGHKDYVRCGDCSPVNGDMFVTGSY-DH-----------------------TVKLWDVRVENSKSVMEVNHGKP 224 (532)
Q Consensus 169 ~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~-dg-----------------------~i~iwd~~~~~~~~~~~~~~~~~ 224 (532)
+....+..+... ..+.|+| ++..++.++. ++ .|.+||+.+++........+...
T Consensus 165 ~~~~~~~~~~~~-~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 242 (337)
T 1pby_B 165 TLVEDKPIQSWE-AETYAQP-DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVF 242 (337)
T ss_dssp EEEEEECSTTTT-TTTBCCC-BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred cEeeeeeccccC-CCceeCC-CccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCc
Confidence 888776544311 1236788 6665544432 22 46899998876552223356667
Q ss_pred EEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 225 IEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 225 v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
+.+++|+|+|++++++ ++.|.+||+.++ +.+..+..+ ..+.+++|+|+ +.++++++.++.|.+||+.+
T Consensus 243 ~~~~~~s~dg~~l~~~-~~~v~~~d~~~~-~~~~~~~~~-~~~~~~~~s~d---------g~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 243 YFSTAVNPAKTRAFGA-YNVLESFDLEKN-ASIKRVPLP-HSYYSVNVSTD---------GSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp EEEEEECTTSSEEEEE-ESEEEEEETTTT-EEEEEEECS-SCCCEEEECTT---------SCEEEEESBSSEEEEEETTT
T ss_pred eeeEEECCCCCEEEEe-CCeEEEEECCCC-cCcceecCC-CceeeEEECCC---------CCEEEEEcCCCcEEEEECcC
Confidence 8899999999998888 799999999876 666665433 45789999999 56788888899999999999
Q ss_pred ceEEEeeec
Q 038802 305 MKVTHSMRF 313 (532)
Q Consensus 305 ~~~~~~~~~ 313 (532)
++.+..+..
T Consensus 311 ~~~~~~~~~ 319 (337)
T 1pby_B 311 LEKKGQVDL 319 (337)
T ss_dssp CCEEEEEEC
T ss_pred CcEEEEEEc
Confidence 998888763
No 152
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=1.3e-20 Score=182.42 Aligned_cols=243 Identities=11% Similarity=0.046 Sum_probs=188.7
Q ss_pred CceeEEEEEccCCCEEEEEcC-------CCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCc-EEEEEeCCCeEEEEE
Q 038802 93 KDVVTCSSFRPDGSLLAASDL-------SGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKL-HLVSGGDDGIVKFWD 164 (532)
Q Consensus 93 ~~~v~~~~~~~~~~~l~~g~~-------dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~-~l~s~s~dg~i~iwd 164 (532)
...+..++|+|+++++++++. ++.|.+||..+++.+..+.. ...+..++|+| +++ .++++..++.|.+||
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINN-TTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEET-TTTEEEEEETTTTEEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECC-CCCEEEEEecCCCEEEEEe
Confidence 456789999999998888764 56899999999988887764 34467899999 766 455556689999999
Q ss_pred CCCCeEEEeccCCCCc---------eEEEEEeCCCCCEEEEEe--CCCeEEEEEcccCCceeEEEecCCCcEEEEEEecC
Q 038802 165 VAGESVVLDLFGHKDY---------VRCGDCSPVNGDMFVTGS--YDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPS 233 (532)
Q Consensus 165 ~~~~~~~~~~~~~~~~---------v~~i~~~~~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~ 233 (532)
..+++.+..+..+... +.+++|+| +++.+++++ .++.|.+||..+++...... .+...+.+++|+|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQ-NTGKMSTGLALDSE 195 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEEC-CCCTTCCCCEEETT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEec-CCCCccceEEECCC
Confidence 9999988777654322 68899999 888777665 47889999998754443332 25556889999999
Q ss_pred CCEEEEEc-CCeEEEEEccCCCeeeEEccC----CCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEE
Q 038802 234 GGLIATAG-GNSVKIWDLIGGGKMVYSMES----HNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVT 308 (532)
Q Consensus 234 ~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (532)
|+.+++++ ++.|.+||+.++ +....+.. +...+.+++|+|++ ..++++...++.|.+||+.+++.+
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg--------~~l~~~~~~~~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADN-KILSRKKLLDDGKEHFFINISLDTAR--------QRAFITDSKAAEVLVVDTRNGNIL 266 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTT-EEEEEEECCCSSSCCCEEEEEEETTT--------TEEEEEESSSSEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCeEEEEECCCC-eEEEEEEcCCCCCCcccceEEECCCC--------CEEEEEeCCCCEEEEEECCCCcEE
Confidence 99888887 899999999887 55555543 55568889999994 334444445699999999999998
Q ss_pred EeeecCCCeeEEEEecCCCEEEEEe-cCCcEEEEeecCcccc
Q 038802 309 HSMRFPAPLMSVAFSPDCMTRVIGT-SNGTIFAGRRKKKENV 349 (532)
Q Consensus 309 ~~~~~~~~v~~~~~s~~~~~l~~g~-~dg~i~iw~~~~~~~~ 349 (532)
..+....+ .+++|+|+|+++++++ .++.|.+|+..+.+..
T Consensus 267 ~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 267 AKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp EEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 88875554 6799999999766655 6899999999877654
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=4.8e-20 Score=179.13 Aligned_cols=271 Identities=11% Similarity=0.146 Sum_probs=186.7
Q ss_pred CCCeEEEEEe----CCeEEEEeC--CCceEEEEeeccCceeEEEEEccCCCEEEEEcCC----CCEEEEECCC--Cc--e
Q 038802 62 TTSHLFAATH----SASLTLFSS--QTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLS----GLIQVFDVKS--RT--P 127 (532)
Q Consensus 62 ~~~~l~~~~~----d~~v~i~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d----g~i~iwd~~~--~~--~ 127 (532)
...++++|+. ++.|.+|++ .+++.......+...+..++|+|||++|++++.+ +.|.+|++.. ++ .
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~ 91 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHL 91 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEE
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEE
Confidence 3345666654 467888865 4555433322267778889999999999988875 7999998865 43 2
Q ss_pred EEEecCCCCCEEEEEeecCCCcEEEEEe-CCCeEEEEECCCCeEEEec------cC--------CCCceEEEEEeCCCCC
Q 038802 128 LRRLKSHTRPVRFVKYPFLDKLHLVSGG-DDGIVKFWDVAGESVVLDL------FG--------HKDYVRCGDCSPVNGD 192 (532)
Q Consensus 128 ~~~~~~h~~~i~~~~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~------~~--------~~~~v~~i~~~~~~~~ 192 (532)
+.....+......+++ ++.++++++ .++.|.+|++.....+... .+ +...+.+++|+| +++
T Consensus 92 ~~~~~~~~~~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~ 167 (361)
T 3scy_A 92 LNTQKTMGADPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGK 167 (361)
T ss_dssp EEEEECSSSCEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSS
T ss_pred eeEeccCCCCcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCC
Confidence 3344445566777777 455555555 6899999999754322111 11 223457899999 888
Q ss_pred EEEEEe-CCCeEEEEEcccCCc------e------eEEEecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCee-
Q 038802 193 MFVTGS-YDHTVKLWDVRVENS------K------SVMEVNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKM- 256 (532)
Q Consensus 193 ~l~s~s-~dg~i~iwd~~~~~~------~------~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~- 256 (532)
++++++ .++.|.+|++..... . .............++|+|+|+++++++ ++.|.+||+.++ ..
T Consensus 168 ~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g-~~~ 246 (361)
T 3scy_A 168 YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG-MLD 246 (361)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT-EEE
T ss_pred EEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC-ceE
Confidence 665544 588999999876442 1 233345566788999999999776665 789999999865 32
Q ss_pred -eEE---ccCCCcceEEEEEeccCCCCCccccccEEEEEec--CCeEEEEECC--Cce--EEEeeecCCCeeEEEEecCC
Q 038802 257 -VYS---MESHNKTVTSVCVGRVGNESGEEAMQYRILSVAL--DGYMKVFDYG--KMK--VTHSMRFPAPLMSVAFSPDC 326 (532)
Q Consensus 257 -~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~--dg~i~iwd~~--~~~--~~~~~~~~~~v~~~~~s~~~ 326 (532)
+.. ...+......++|+|+ +.+|++++. ++.|.+|++. +++ .+..+.....+.+++|+|||
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~spd---------g~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg 317 (361)
T 3scy_A 247 EIQTVAADTVNAQGSGDIHLSPD---------GKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNG 317 (361)
T ss_dssp EEEEEESCSSCCCCEEEEEECTT---------SSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTS
T ss_pred EeEEEecCCCCCCCcccEEECCC---------CCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCC
Confidence 222 2233455789999999 566655554 5899999985 444 44444445578899999999
Q ss_pred CEEEEEe-cCCcEEEEeecCc
Q 038802 327 MTRVIGT-SNGTIFAGRRKKK 346 (532)
Q Consensus 327 ~~l~~g~-~dg~i~iw~~~~~ 346 (532)
++|++++ .++.|.+|+++..
T Consensus 318 ~~l~~~~~~~~~v~v~~~d~~ 338 (361)
T 3scy_A 318 KYLLVACRDTNVIQIFERDQA 338 (361)
T ss_dssp CEEEEEETTTTEEEEEEECTT
T ss_pred CEEEEEECCCCCEEEEEEECC
Confidence 9988887 6789999877643
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=3.1e-20 Score=179.44 Aligned_cols=250 Identities=10% Similarity=0.105 Sum_probs=177.3
Q ss_pred CccccCeeEEEEcCCCCeEEEEEe---CCeEEEEeCCCce--EEEEeeccCceeEEEEEccCCCEEEEEc-CCCCEEEEE
Q 038802 48 PGLVSSINSIVFSPTTSHLFAATH---SASLTLFSSQTLE--KHSAISSFKDVVTCSSFRPDGSLLAASD-LSGLIQVFD 121 (532)
Q Consensus 48 ~~h~~~V~~i~~sp~~~~l~~~~~---d~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~dg~i~iwd 121 (532)
..+...+..++|+|+|+ +++++. ++.|.+|++.++. .+..+..+...+..++|+|||++|++++ .++.|.+|+
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 34567788999999999 666655 5899999997665 4444455777889999999999888877 678999999
Q ss_pred CCC-C--ceEEEecC---------CCCCEEEEEeecCCCcEEEEEeCCCeEEEEECC-CCeEE--EeccC-CCCceEEEE
Q 038802 122 VKS-R--TPLRRLKS---------HTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVA-GESVV--LDLFG-HKDYVRCGD 185 (532)
Q Consensus 122 ~~~-~--~~~~~~~~---------h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~-~~~~~--~~~~~-~~~~v~~i~ 185 (532)
+.. + ..+..+.. +...+.+++|+| ++++++++..++.|.+|++. +++.. ..+.. ....+..++
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 963 2 22333321 123488999999 77767777778999999998 55432 22222 233677899
Q ss_pred EeCCCCCEEEE-EeCCCeEEEEEccc--CCceeEEEec-CC------CcEEEEEEecCCCEEEEE-c-CCeEEEEEccCC
Q 038802 186 CSPVNGDMFVT-GSYDHTVKLWDVRV--ENSKSVMEVN-HG------KPIEDVMFLPSGGLIATA-G-GNSVKIWDLIGG 253 (532)
Q Consensus 186 ~~~~~~~~l~s-~s~dg~i~iwd~~~--~~~~~~~~~~-~~------~~v~~i~~~~~~~~l~~~-~-d~~i~iwd~~~~ 253 (532)
|+| +++++++ +..++.|.+|++.. +......... .. ..+..++|+|+|++|+++ . ++.|.+||+...
T Consensus 194 ~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~ 272 (347)
T 3hfq_A 194 FSP-DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD 272 (347)
T ss_dssp ECT-TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG
T ss_pred ECC-CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC
Confidence 999 8885555 56788999999885 2222222211 11 458899999999977544 4 789999998633
Q ss_pred C--eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEec-CCeEEEE--ECCCceEEE
Q 038802 254 G--KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVAL-DGYMKVF--DYGKMKVTH 309 (532)
Q Consensus 254 ~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~-dg~i~iw--d~~~~~~~~ 309 (532)
+ ..+..+..+...+..++|+|+ +.+|++++. ++.|.+| |..++++..
T Consensus 273 g~~~~~~~~~~~~~~~~~~~~spd---------g~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 273 GHLTLIQQISTEGDFPRDFDLDPT---------EAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp GCEEEEEEEECSSSCCCEEEECTT---------SSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CcEEEeEEEecCCCCcCeEEECCC---------CCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 2 455556666667889999999 566666665 5899999 556676653
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.88 E-value=9.4e-21 Score=186.01 Aligned_cols=289 Identities=12% Similarity=0.038 Sum_probs=200.4
Q ss_pred cCccccCeeE-----EEEcCCCCeEEEEEe-CC--eEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEE
Q 038802 47 IPGLVSSINS-----IVFSPTTSHLFAATH-SA--SLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQ 118 (532)
Q Consensus 47 ~~~h~~~V~~-----i~~sp~~~~l~~~~~-d~--~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~ 118 (532)
+..|...... .+|+|||++|+.++. ++ .|.+||..+++.......+...+..+.|+|||+.|+.++.++.|+
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~ 105 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLM 105 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEE
T ss_pred ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEE
Confidence 3445444444 889999999999887 66 588999999888777666666666778999999999999899999
Q ss_pred EEECCCCceEEEecCCCCCEEEEEe--ecCCCcEEEEE----------------------eCCCeEEEEECCCCeEEEec
Q 038802 119 VFDVKSRTPLRRLKSHTRPVRFVKY--PFLDKLHLVSG----------------------GDDGIVKFWDVAGESVVLDL 174 (532)
Q Consensus 119 iwd~~~~~~~~~~~~h~~~i~~~~~--~~~~~~~l~s~----------------------s~dg~i~iwd~~~~~~~~~~ 174 (532)
+||+.+++....+..+...+....| +| ++..++.. +.++.|.+||+.+++... +
T Consensus 106 ~~d~~~g~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l 183 (388)
T 3pe7_A 106 RVDLATLEENVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-I 183 (388)
T ss_dssp EEETTTCCEEEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-E
T ss_pred EEECCCCcceeeeechhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-e
Confidence 9999998877777666665544444 67 77777642 245789999999886544 4
Q ss_pred cCCCCceEEEEEeCCCCCEEEEEeCC------CeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc--CC---
Q 038802 175 FGHKDYVRCGDCSPVNGDMFVTGSYD------HTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG--GN--- 243 (532)
Q Consensus 175 ~~~~~~v~~i~~~~~~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~--- 243 (532)
..+...+..+.|+|.++..++.++.+ ..|.++|.................+....|+|+|+.|+..+ ++
T Consensus 184 ~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 263 (388)
T 3pe7_A 184 LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPD 263 (388)
T ss_dssp EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCC
T ss_pred ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCc
Confidence 45667789999998556777666553 36888887654332222211113578899999999775544 22
Q ss_pred -eEEEEEccCCCe-eeEEccCCCcc---eEEEEEeccCCCCCccccccEEEEE---------ecCCeEEEEECCCceEEE
Q 038802 244 -SVKIWDLIGGGK-MVYSMESHNKT---VTSVCVGRVGNESGEEAMQYRILSV---------ALDGYMKVFDYGKMKVTH 309 (532)
Q Consensus 244 -~i~iwd~~~~~~-~~~~~~~~~~~---i~~~~~~~~~~~~~~~~~~~~l~s~---------~~dg~i~iwd~~~~~~~~ 309 (532)
.|.+||+.++.. .+..+.++... .....|+|+| ..++.. ..+..|++||+.+++...
T Consensus 264 ~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg---------~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 334 (388)
T 3pe7_A 264 RFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDG---------SDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHR 334 (388)
T ss_dssp EEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEE---------CCC------------CCCCEEEEEETTTTEEEE
T ss_pred ceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCC---------CcceeEeeeccccccCCCCEEEEEeccCCceEE
Confidence 399999987732 23333331111 1123688985 444432 456789999999988765
Q ss_pred eeecCC-----------CeeEEEEecCCCEEEEEe-cCCcEEEEeecCc
Q 038802 310 SMRFPA-----------PLMSVAFSPDCMTRVIGT-SNGTIFAGRRKKK 346 (532)
Q Consensus 310 ~~~~~~-----------~v~~~~~s~~~~~l~~g~-~dg~i~iw~~~~~ 346 (532)
...+.. .+.+++|+|||+.|+.++ .+|...+|.++-.
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 335 VARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred eccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 555555 578899999999887665 5777777776543
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=3e-21 Score=205.44 Aligned_cols=275 Identities=9% Similarity=0.021 Sum_probs=198.2
Q ss_pred EEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCc---eeEEEEEccCCCEEEEEcC---------CCCEEEEECC
Q 038802 56 SIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKD---VVTCSSFRPDGSLLAASDL---------SGLIQVFDVK 123 (532)
Q Consensus 56 ~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~g~~---------dg~i~iwd~~ 123 (532)
+++|+|+|. +++.+.|+.|++||..+++....+..+.. .+.+++|+|||++|++++. ++.|++||+.
T Consensus 20 ~~~~s~dg~-~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQE-YLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSE-EEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCe-EEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 789999996 44455799999999999988777766544 3899999999999998876 6899999999
Q ss_pred CCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec-cCCCCce-----------------EEEE
Q 038802 124 SRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL-FGHKDYV-----------------RCGD 185 (532)
Q Consensus 124 ~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~v-----------------~~i~ 185 (532)
+++.+.... ....+..++|+| +++.|++++ |+.|++||+.+++..... .++...| .+++
T Consensus 99 ~g~~~~~~~-l~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 99 NGEFVRGNE-LPRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp TTEECCSSC-CCSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred CCcccccee-cCcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 887621111 235688899999 898888886 789999999888765433 2333222 4899
Q ss_pred EeCCCCCEEEEEeCCC----------------------------------eEEEEEcccCCce--eEEE-----ecCCCc
Q 038802 186 CSPVNGDMFVTGSYDH----------------------------------TVKLWDVRVENSK--SVME-----VNHGKP 224 (532)
Q Consensus 186 ~~~~~~~~l~s~s~dg----------------------------------~i~iwd~~~~~~~--~~~~-----~~~~~~ 224 (532)
|+| +++.|++++.|. .|++||+.++... .... ..+...
T Consensus 176 wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 176 WSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp ECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred ECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 999 999999988652 7889999875432 1111 146778
Q ss_pred EEEEEEecCCCEEEEEc-C----CeEEEEE----ccCCCeeeEEc----cCCCcceE-----EEEEeccCCCCCcccccc
Q 038802 225 IEDVMFLPSGGLIATAG-G----NSVKIWD----LIGGGKMVYSM----ESHNKTVT-----SVCVGRVGNESGEEAMQY 286 (532)
Q Consensus 225 v~~i~~~~~~~~l~~~~-d----~~i~iwd----~~~~~~~~~~~----~~~~~~i~-----~~~~~~~~~~~~~~~~~~ 286 (532)
+.+++|+||++++++.. . ..|.+|| +.++ ++...+ ..|...+. .+.|+|+| ..
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg--------~~ 325 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW-DCPKTQEHIEESRTGWAGGFFVSTPVFSYDA--------IS 325 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE-ECCGGGEEEEECSSSCSSSSSCCCCEECTTS--------SC
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC-ceEEEEecccccCCceEccccCCccEECCCC--------Ce
Confidence 99999999988777744 2 2588899 6554 444334 36666666 78999995 23
Q ss_pred EEE-EEecCC--eEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecC-----CcEEEEeecC
Q 038802 287 RIL-SVALDG--YMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSN-----GTIFAGRRKK 345 (532)
Q Consensus 287 ~l~-s~~~dg--~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~d-----g~i~iw~~~~ 345 (532)
+++ ++..+| .|.+||+.+++......+...+..+.++ +++.++..+.+ +...+|.+..
T Consensus 326 l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 326 YYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred EEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 333 344555 5777788777643333345567787777 88877766655 7888998865
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=2.3e-19 Score=174.55 Aligned_cols=269 Identities=13% Similarity=0.077 Sum_probs=185.7
Q ss_pred eEEEEEeC--CeEEEEeC--CCceEEEE--ee-ccCceeEEEEEccCCCEEEEEcCCCCEEEEECC-CCceEEEecC-CC
Q 038802 65 HLFAATHS--ASLTLFSS--QTLEKHSA--IS-SFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVK-SRTPLRRLKS-HT 135 (532)
Q Consensus 65 ~l~~~~~d--~~v~i~~~--~~~~~~~~--~~-~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~-h~ 135 (532)
++++|+.. +.|.+|++ .+++.... .. .....+..++|+|||++|++++.+ .|.+|++. +++....... ..
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 45666653 46777654 55654322 11 233467889999999999988877 89999997 7765443221 11
Q ss_pred CCEEEEEeecCCCcE--EEEEe-------------CCCeEEEEECC-CCeEEEecc----CCCCceEEEEEeCCCCCEEE
Q 038802 136 RPVRFVKYPFLDKLH--LVSGG-------------DDGIVKFWDVA-GESVVLDLF----GHKDYVRCGDCSPVNGDMFV 195 (532)
Q Consensus 136 ~~i~~~~~~~~~~~~--l~s~s-------------~dg~i~iwd~~-~~~~~~~~~----~~~~~v~~i~~~~~~~~~l~ 195 (532)
+.+.+++|+| +++. +++++ .+|.+.+|++. +++....+. .+...+.+++|+| ++++++
T Consensus 83 g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~ 160 (365)
T 1jof_A 83 GHPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLY 160 (365)
T ss_dssp SSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEE
T ss_pred CCCccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEE
Confidence 2355688999 8874 44553 68999999997 455443332 2556789999999 898887
Q ss_pred EEeC-CCeEEEEEcc-cCCceeEEEec---CCCcEEEEEEecCCCEEEEEc--CCeEEEEEcc--CCCeee------EEc
Q 038802 196 TGSY-DHTVKLWDVR-VENSKSVMEVN---HGKPIEDVMFLPSGGLIATAG--GNSVKIWDLI--GGGKMV------YSM 260 (532)
Q Consensus 196 s~s~-dg~i~iwd~~-~~~~~~~~~~~---~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~--~~~~~~------~~~ 260 (532)
++.. ++.|.+||+. +++........ +...+..++|+|+|+++++++ ++.|.+|++. ++ +.. ..+
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g-~~~~~~~~~~~~ 239 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATH-MPVYTHHSFPLI 239 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTC-CEEEEEEEEESS
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCC-cEEEccceEEcC
Confidence 7654 6799999998 55443322222 366789999999999887765 6799999875 33 321 122
Q ss_pred c----CCCc------ceEEEE-EeccCCCCCccccccEEEEEecC-C-----eEEEEECC-CceEEE---eee-cCCCee
Q 038802 261 E----SHNK------TVTSVC-VGRVGNESGEEAMQYRILSVALD-G-----YMKVFDYG-KMKVTH---SMR-FPAPLM 318 (532)
Q Consensus 261 ~----~~~~------~i~~~~-~~~~~~~~~~~~~~~~l~s~~~d-g-----~i~iwd~~-~~~~~~---~~~-~~~~v~ 318 (532)
. +|.. .+..++ |+|+ +++|++++.+ + .|.+|++. +++... ... +...+.
T Consensus 240 ~~~~~g~~~~~~~~~~~~~i~~~spd---------G~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~ 310 (365)
T 1jof_A 240 PPGIPDRDPETGKGLYRADVCALTFS---------GKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGH 310 (365)
T ss_dssp CTTCCCBCTTTSSBSEEEEEEEECTT---------SSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTT
T ss_pred CCCcCCcccccccccccccEEEECCC---------CCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcc
Confidence 2 1222 588999 9999 4566665543 3 89999996 566543 233 344678
Q ss_pred EEEEec---CCCEEEEEecC-CcEEEEeecCc
Q 038802 319 SVAFSP---DCMTRVIGTSN-GTIFAGRRKKK 346 (532)
Q Consensus 319 ~~~~s~---~~~~l~~g~~d-g~i~iw~~~~~ 346 (532)
.++|+| ||++|++++.+ +.|.+|+++..
T Consensus 311 ~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 311 SNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred cceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 899999 89999999875 89999999865
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=9.6e-19 Score=169.91 Aligned_cols=260 Identities=12% Similarity=0.093 Sum_probs=179.9
Q ss_pred cccCeeEEEEcCCCCeEEEEEeC----CeEEEEeCCC--ceE--EEEeeccCceeEEEEEccCCCEEEEEc-CCCCEEEE
Q 038802 50 LVSSINSIVFSPTTSHLFAATHS----ASLTLFSSQT--LEK--HSAISSFKDVVTCSSFRPDGSLLAASD-LSGLIQVF 120 (532)
Q Consensus 50 h~~~V~~i~~sp~~~~l~~~~~d----~~v~i~~~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~l~~g~-~dg~i~iw 120 (532)
+...+..++|+|+|++|++++.+ +.|.+|++.. ++. +.....+......+++ ++++|++++ .++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 66778889999999999998875 7999998754 433 3334445556777777 888777665 57899999
Q ss_pred ECCCCceEEEe------cC--------CCCCEEEEEeecCCCcEEEEEe-CCCeEEEEECCCCe-------E------EE
Q 038802 121 DVKSRTPLRRL------KS--------HTRPVRFVKYPFLDKLHLVSGG-DDGIVKFWDVAGES-------V------VL 172 (532)
Q Consensus 121 d~~~~~~~~~~------~~--------h~~~i~~~~~~~~~~~~l~s~s-~dg~i~iwd~~~~~-------~------~~ 172 (532)
++.....+..+ .+ +...+.+++|+| +++++++++ .++.|.+|++.... . ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 99754322211 11 223468899999 887665554 58999999887533 1 11
Q ss_pred eccCCCCceEEEEEeCCCCCEEEEEe-CCCeEEEEEcccCCceeEEEe----cCCCcEEEEEEecCCCEEEEEc-C--Ce
Q 038802 173 DLFGHKDYVRCGDCSPVNGDMFVTGS-YDHTVKLWDVRVENSKSVMEV----NHGKPIEDVMFLPSGGLIATAG-G--NS 244 (532)
Q Consensus 173 ~~~~~~~~v~~i~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~----~~~~~v~~i~~~~~~~~l~~~~-d--~~ 244 (532)
....+......++|+| +++++++++ .++.|.+||+.++........ .+......++|+|+|++|+++. + +.
T Consensus 205 ~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~ 283 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADG 283 (361)
T ss_dssp EECCTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCE
T ss_pred eecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCE
Confidence 2233455678999999 898777766 689999999986543322222 2234568999999999886665 5 68
Q ss_pred EEEEEcc--CCC-eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEe-cCCeEEEE--ECCCceEEEeee--cCCC
Q 038802 245 VKIWDLI--GGG-KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVA-LDGYMKVF--DYGKMKVTHSMR--FPAP 316 (532)
Q Consensus 245 i~iwd~~--~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~-~dg~i~iw--d~~~~~~~~~~~--~~~~ 316 (532)
|.+|++. ++. ..+..+.. ...+.+++|+|+ +.+|++++ .++.|.+| |..++++..... +...
T Consensus 284 i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spd---------g~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~ 353 (361)
T 3scy_A 284 VAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPN---------GKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDK 353 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTT---------SCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSS
T ss_pred EEEEEEcCCCCcEEEeeEecC-CCCCceEEECCC---------CCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCC
Confidence 9999986 221 23444443 456789999999 56666666 67899996 555777665542 3356
Q ss_pred eeEEEEe
Q 038802 317 LMSVAFS 323 (532)
Q Consensus 317 v~~~~~s 323 (532)
+.|+.|.
T Consensus 354 p~~v~~~ 360 (361)
T 3scy_A 354 PVCLKFV 360 (361)
T ss_dssp EEEEEEE
T ss_pred CeEEEEc
Confidence 8888886
No 159
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=7.4e-20 Score=181.57 Aligned_cols=200 Identities=15% Similarity=0.084 Sum_probs=149.6
Q ss_pred ccccCeeEEEEcCCCCeEE----EEEeCCeEEEEeCCCc--------e---EEEEeeccCceeEEEEEccC-CCEEEEEc
Q 038802 49 GLVSSINSIVFSPTTSHLF----AATHSASLTLFSSQTL--------E---KHSAISSFKDVVTCSSFRPD-GSLLAASD 112 (532)
Q Consensus 49 ~h~~~V~~i~~sp~~~~l~----~~~~d~~v~i~~~~~~--------~---~~~~~~~~~~~v~~~~~~~~-~~~l~~g~ 112 (532)
.|.+.|++++|+|++++|+ +|+.|+.|+|||+.++ + ....+.+|.+.|.+++|+|+ +.+|++|+
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 3567899999999999999 6677999999998654 1 24556779999999999997 88999999
Q ss_pred CCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCC-------CCceEEEE
Q 038802 113 LSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGH-------KDYVRCGD 185 (532)
Q Consensus 113 ~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~i~ 185 (532)
.||+|++||+.++.......+|...|.+++|+| ++.+|++|+.||+|++||++ ++....+..| ...|.+++
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~ 247 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVL 247 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEE
T ss_pred CCCeEEEEEcCCCcceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEE
Confidence 999999999998877777778999999999999 89999999999999999998 5555544333 33899999
Q ss_pred EeCCCCCEEEE-EeCCC------eEEEEEcccCCce--eEEE-e--------cCCCcEEEEEEecCCCEEEEEc--CCeE
Q 038802 186 CSPVNGDMFVT-GSYDH------TVKLWDVRVENSK--SVME-V--------NHGKPIEDVMFLPSGGLIATAG--GNSV 245 (532)
Q Consensus 186 ~~~~~~~~l~s-~s~dg------~i~iwd~~~~~~~--~~~~-~--------~~~~~v~~i~~~~~~~~l~~~~--d~~i 245 (532)
|++ ++.++++ ++.|| .+++||++..... ..+. . ....+-..+.+.++.+++++++ .+.|
T Consensus 248 w~~-~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv 326 (434)
T 2oit_A 248 WIG-TYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEV 326 (434)
T ss_dssp EEE-TTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBC
T ss_pred Eec-CceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCce
Confidence 998 6666644 33443 3899999864321 1111 1 1112223344447777766665 5567
Q ss_pred EEEEcc
Q 038802 246 KIWDLI 251 (532)
Q Consensus 246 ~iwd~~ 251 (532)
.++...
T Consensus 327 ~vl~~~ 332 (434)
T 2oit_A 327 SILARQ 332 (434)
T ss_dssp EEEEEC
T ss_pred eEEEec
Confidence 777643
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=1.4e-20 Score=200.30 Aligned_cols=299 Identities=8% Similarity=0.009 Sum_probs=206.9
Q ss_pred CCCCcccccccCCCc--c-Ccccc---CeeEEEEcCCCCeEEEEEe---------CCeEEEEeCCCceEE--EEeeccCc
Q 038802 32 QTPESKYWSSFKPHQ--I-PGLVS---SINSIVFSPTTSHLFAATH---------SASLTLFSSQTLEKH--SAISSFKD 94 (532)
Q Consensus 32 ~~~~~~~w~~~~~~~--~-~~h~~---~V~~i~~sp~~~~l~~~~~---------d~~v~i~~~~~~~~~--~~~~~~~~ 94 (532)
.++.+.+|+.-.... + .+|.. .|.+++|||||++|++++. ++.|++||+.+++.. ..+ ..
T Consensus 34 ~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~ 110 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PR 110 (719)
T ss_dssp TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CS
T ss_pred CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---Cc
Confidence 366788998654432 2 23333 4999999999999998876 689999999988762 222 35
Q ss_pred eeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEe-cCCCCCE-----------------EEEEeecCCCcEEEEEeC
Q 038802 95 VVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRL-KSHTRPV-----------------RFVKYPFLDKLHLVSGGD 156 (532)
Q Consensus 95 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~-~~h~~~i-----------------~~~~~~~~~~~~l~s~s~ 156 (532)
.+.+++|+|||+.||.+. ++.|++|++.+++..... .++...| .+++|+| +++.|++++.
T Consensus 111 ~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~ 188 (719)
T 1z68_A 111 PIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEF 188 (719)
T ss_dssp SBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEE
T ss_pred ccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEE
Confidence 688899999999999986 789999999888765433 2333323 4899999 9999998876
Q ss_pred CC----------------------------------eEEEEECCCCeEE---E-----eccCCCCceEEEEEeCCCCCEE
Q 038802 157 DG----------------------------------IVKFWDVAGESVV---L-----DLFGHKDYVRCGDCSPVNGDMF 194 (532)
Q Consensus 157 dg----------------------------------~i~iwd~~~~~~~---~-----~~~~~~~~v~~i~~~~~~~~~l 194 (532)
|. .|++||+.+++.. . .+.+|...+.+++|+| ++.++
T Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-D~~~~ 267 (719)
T 1z68_A 189 NDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT-DERVC 267 (719)
T ss_dssp ECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS-SSEEE
T ss_pred CCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeC-CCeEE
Confidence 52 7899999987642 1 2346888899999999 77777
Q ss_pred EEEeCC----CeEEEEE----cccCCceeEEE---ecCCCcEE-----EEEEecCCCEEEE--Ec-CC--eEEEEEccCC
Q 038802 195 VTGSYD----HTVKLWD----VRVENSKSVME---VNHGKPIE-----DVMFLPSGGLIAT--AG-GN--SVKIWDLIGG 253 (532)
Q Consensus 195 ~s~s~d----g~i~iwd----~~~~~~~~~~~---~~~~~~v~-----~i~~~~~~~~l~~--~~-d~--~i~iwd~~~~ 253 (532)
++.... ..|.+|| ..+++...... ..+...+. .+.|+|+|+.++. +. +| .|.+||+.++
T Consensus 268 ~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~ 347 (719)
T 1z68_A 268 LQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE 347 (719)
T ss_dssp EEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST
T ss_pred EEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC
Confidence 764432 2488899 66654443332 35566666 7899999995543 33 44 6777787665
Q ss_pred CeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEec----CCeEEEEECCC--ce-EEEeee-----cCCCeeEEE
Q 038802 254 GKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVAL----DGYMKVFDYGK--MK-VTHSMR-----FPAPLMSVA 321 (532)
Q Consensus 254 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~----dg~i~iwd~~~--~~-~~~~~~-----~~~~v~~~~ 321 (532)
. ...+..+...+..+.++ ++ +..++++.. ++..++|.+.. +. ....+. +...+..+.
T Consensus 348 -~-~~~lt~~~~~v~~~~~~-d~--------~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~ 416 (719)
T 1z68_A 348 -N-AIQITSGKWEAINIFRV-TQ--------DSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTAS 416 (719)
T ss_dssp -T-CEECSCSSSCEEEEEEE-CS--------SEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEE
T ss_pred -c-eEecccCceEEEEEEEE-eC--------CEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEE
Confidence 3 45565666677887777 63 344444443 47888887653 32 122222 335678899
Q ss_pred EecCCCEEEEE-ecC--CcEEEEeecCcc
Q 038802 322 FSPDCMTRVIG-TSN--GTIFAGRRKKKE 347 (532)
Q Consensus 322 ~s~~~~~l~~g-~~d--g~i~iw~~~~~~ 347 (532)
|+|+|++++.. +.. ..+.+|+..+++
T Consensus 417 ~s~dg~~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 417 FSDYAKYYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp ECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred ECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence 99999877754 333 468889887665
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.84 E-value=8.8e-20 Score=189.11 Aligned_cols=229 Identities=14% Similarity=0.084 Sum_probs=169.8
Q ss_pred CceeEEEEEccCCCEEEEEcC-CCCEEEEECCCCceEEEecCCC-CCEEEEEeecCCCcEEEEEeC---CCeEEEEECCC
Q 038802 93 KDVVTCSSFRPDGSLLAASDL-SGLIQVFDVKSRTPLRRLKSHT-RPVRFVKYPFLDKLHLVSGGD---DGIVKFWDVAG 167 (532)
Q Consensus 93 ~~~v~~~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~h~-~~i~~~~~~~~~~~~l~s~s~---dg~i~iwd~~~ 167 (532)
..+|++++|+|||+.||+++. ||++.||++.+++.. .+..|. ..+..++|+| + ..+++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGV-G-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTC-S-EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCC-C-eEEEEeccCCCCcceEEEEEec
Confidence 468999999999999998876 999999999766554 444454 6899999998 6 77777765 45455554432
Q ss_pred ---CeEEEeccCCCCceEEEEEeCCCCC-EEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C
Q 038802 168 ---ESVVLDLFGHKDYVRCGDCSPVNGD-MFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G 242 (532)
Q Consensus 168 ---~~~~~~~~~~~~~v~~i~~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d 242 (532)
+... .+.... .+...+|+| +++ .+++++.++.+.+||+.+++...... . .. .+++|+|||+++++++ +
T Consensus 98 ~~~g~~~-~l~~~~-~~~~~~~s~-dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-~-~~--~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 98 SRPGEEQ-RLEAVK-PMRILSGVD-TGEAVVFTGATEDRVALYALDGGGLRELAR-L-PG--FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp TSTTCCE-ECTTSC-SBEEEEEEE-CSSCEEEEEECSSCEEEEEEETTEEEEEEE-E-SS--CEEEEEEETTEEEEEEEE
T ss_pred cCCCccc-cccCCC-CceeeeeCC-CCCeEEEEecCCCCceEEEccCCcEEEeec-C-CC--ceEEECCCCCEEEEEEEc
Confidence 2222 333222 344668888 554 34444444556699998865443333 2 22 7899999999999776 5
Q ss_pred ----CeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCC--eEEEEECCCceEEEeee-cCC
Q 038802 243 ----NSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDG--YMKVFDYGKMKVTHSMR-FPA 315 (532)
Q Consensus 243 ----~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~-~~~ 315 (532)
+.|++||+.++ + ...+..|...+..++|+|+ +..|++++.+| .|++||+.+++.. .+. +..
T Consensus 171 ~~~~~~i~~~d~~~g-~-~~~l~~~~~~~~~~~~SpD---------G~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~ 238 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSG-G-LRVFDSGEGSFSSASISPG---------MKVTAGLETAREARLVTVDPRDGSVE-DLELPSK 238 (582)
T ss_dssp ETTEEEEEEEETTTC-C-CEEECCSSCEEEEEEECTT---------SCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCS
T ss_pred CCCCeEEEEEcCCCC-C-ceEeecCCCccccceECCC---------CCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCc
Confidence 57999998876 3 3466788889999999999 57788888888 8999999998887 443 555
Q ss_pred CeeEEE--------EecCCCEEEEEecCCcEEEEee
Q 038802 316 PLMSVA--------FSPDCMTRVIGTSNGTIFAGRR 343 (532)
Q Consensus 316 ~v~~~~--------~s~~~~~l~~g~~dg~i~iw~~ 343 (532)
.+..++ |+|||..+++++.||.+.+|++
T Consensus 239 ~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 239 DFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp HHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred ChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 666667 9999999999999999999998
No 162
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.84 E-value=1.1e-19 Score=178.66 Aligned_cols=279 Identities=8% Similarity=-0.025 Sum_probs=186.2
Q ss_pred cccCeeEEEEcCCCCeEEEEEeC---CeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCc
Q 038802 50 LVSSINSIVFSPTTSHLFAATHS---ASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRT 126 (532)
Q Consensus 50 h~~~V~~i~~sp~~~~l~~~~~d---~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~ 126 (532)
|...+.+++|+|||++++.+... ..|.+||..+++.......+......+.|+|||++|+.++.++.|++||+.+++
T Consensus 34 ~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 34 HRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp ECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred cceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 33447788999999998887653 378999998887654433333333347899999999999888899999999887
Q ss_pred eEEEecCCCCCEEE-------------------EEeecCCCcEEEEE-----eCCCeEEEEECCCCeEEEeccCCCCceE
Q 038802 127 PLRRLKSHTRPVRF-------------------VKYPFLDKLHLVSG-----GDDGIVKFWDVAGESVVLDLFGHKDYVR 182 (532)
Q Consensus 127 ~~~~~~~h~~~i~~-------------------~~~~~~~~~~l~s~-----s~dg~i~iwd~~~~~~~~~~~~~~~~v~ 182 (532)
.......+...... +.|+| ++..++.+ ..+..|.+||+.+++..... .+...+.
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~ 191 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLG 191 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEE
T ss_pred cEEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccc
Confidence 66655544442222 24555 55544433 45678999999988765444 4667788
Q ss_pred EEEEeCCCCCEEEEEeCC------CeEEEEEcccCCceeEEEecC-CCcEEEEEEecCCCEEEEEc-C-----CeEEEEE
Q 038802 183 CGDCSPVNGDMFVTGSYD------HTVKLWDVRVENSKSVMEVNH-GKPIEDVMFLPSGGLIATAG-G-----NSVKIWD 249 (532)
Q Consensus 183 ~i~~~~~~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~-~~~v~~i~~~~~~~~l~~~~-d-----~~i~iwd 249 (532)
.+.|+|.++..++..+.+ ..|.+||+.......... .. ...+..+.|+|+|+.|+.++ + +.|.+||
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (396)
T 3c5m_A 192 HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKAN 270 (396)
T ss_dssp EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEEC
T ss_pred cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCCCccceEEEEE
Confidence 999998446656655543 358888886543222222 11 33578899999999776664 2 3499999
Q ss_pred ccCCCeeeEEccCCCcceEEEEEec-cCCCCCccccccEEEEEe----------------cCCeEEEEECCCceEEEeee
Q 038802 250 LIGGGKMVYSMESHNKTVTSVCVGR-VGNESGEEAMQYRILSVA----------------LDGYMKVFDYGKMKVTHSMR 312 (532)
Q Consensus 250 ~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~l~s~~----------------~dg~i~iwd~~~~~~~~~~~ 312 (532)
+.++. ...... ... .. +.|+| + +.++++++ .++.|++||+.+++......
T Consensus 271 ~~~g~-~~~l~~-~~~-~~-~~~s~~d---------g~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 337 (396)
T 3c5m_A 271 PETLE-NEEVMV-MPP-CS-HLMSNFD---------GSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCK 337 (396)
T ss_dssp TTTCC-EEEEEE-CCS-EE-EEEECSS---------SSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEE
T ss_pred CCCCC-eEEeee-CCC-CC-CCccCCC---------CceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccC
Confidence 98763 222111 111 23 88998 8 45666544 34789999998877544333
Q ss_pred cCC-----------CeeEEEEecCCCEEEEEec-CCcEEEEeec
Q 038802 313 FPA-----------PLMSVAFSPDCMTRVIGTS-NGTIFAGRRK 344 (532)
Q Consensus 313 ~~~-----------~v~~~~~s~~~~~l~~g~~-dg~i~iw~~~ 344 (532)
+.. .+..++|+|||+.|+.++. +|...+|.++
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 338 HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 443 2567899999998877664 5655555554
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=2.9e-18 Score=166.69 Aligned_cols=243 Identities=12% Similarity=0.087 Sum_probs=171.4
Q ss_pred ccCeeEEEEcCCCCeEEEEEeCCeEEEEeCC-CceEEEEeecc-CceeEEEEEccCCCE--EEEEc-------------C
Q 038802 51 VSSINSIVFSPTTSHLFAATHSASLTLFSSQ-TLEKHSAISSF-KDVVTCSSFRPDGSL--LAASD-------------L 113 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~--l~~g~-------------~ 113 (532)
...+..++|+|+|+++++++.+ .|.+|++. +++........ .+.+.+++|+|||++ +++++ .
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 3467899999999999988887 99999987 77655433211 123556899999994 55553 6
Q ss_pred CCCEEEEECC-CCceEEEec----CCCCCEEEEEeecCCCcEEEEEeC-CCeEEEEECC-CCeEE--Eecc--CCCCceE
Q 038802 114 SGLIQVFDVK-SRTPLRRLK----SHTRPVRFVKYPFLDKLHLVSGGD-DGIVKFWDVA-GESVV--LDLF--GHKDYVR 182 (532)
Q Consensus 114 dg~i~iwd~~-~~~~~~~~~----~h~~~i~~~~~~~~~~~~l~s~s~-dg~i~iwd~~-~~~~~--~~~~--~~~~~v~ 182 (532)
+|.+.+|++. +++....+. .+...+.+++|+| ++++++++.. ++.|.+||+. +++.. ..+. .|...+.
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 8999999997 465544333 2567799999999 8887777654 6899999998 67543 2332 2456789
Q ss_pred EEEEeCCCCCEEEEEeC-CCeEEEEEccc--CCcee---EEE-ec-----CCC------cEEEEE-EecCCCEEEEEc--
Q 038802 183 CGDCSPVNGDMFVTGSY-DHTVKLWDVRV--ENSKS---VME-VN-----HGK------PIEDVM-FLPSGGLIATAG-- 241 (532)
Q Consensus 183 ~i~~~~~~~~~l~s~s~-dg~i~iwd~~~--~~~~~---~~~-~~-----~~~------~v~~i~-~~~~~~~l~~~~-- 241 (532)
.++|+| +++++++++. ++.|.+|++.. ++... ... .. +.. .+..++ |+|+|++|+++.
T Consensus 197 ~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 197 WVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred EeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 999999 9988887765 78999998763 33221 111 11 111 588999 999999887765
Q ss_pred CC-----eEEEEEccCCCeeeE---EccCCCcceEEEEEec---cCCCCCccccccEEEEEec-CCeEEEEECCCc
Q 038802 242 GN-----SVKIWDLIGGGKMVY---SMESHNKTVTSVCVGR---VGNESGEEAMQYRILSVAL-DGYMKVFDYGKM 305 (532)
Q Consensus 242 d~-----~i~iwd~~~~~~~~~---~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~ 305 (532)
++ .|.+|++...++... ....+......++|+| + +.+|++++. ++.|.+|++...
T Consensus 276 ~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~d---------g~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 276 NKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS---------DEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTC---------TTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcC---------CCEEEEEEcCCCeEEEEEEchh
Confidence 33 899999963224332 2333444566789999 6 567877776 489999998765
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.83 E-value=1.3e-18 Score=185.32 Aligned_cols=277 Identities=10% Similarity=0.034 Sum_probs=192.3
Q ss_pred cCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCce-----eEEEEEccCCCEEEEEcCC---------CCE
Q 038802 52 SSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDV-----VTCSSFRPDGSLLAASDLS---------GLI 117 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~g~~d---------g~i 117 (532)
....++.|+|||.+++++ |+.|++||+.+++....+.+|... ...++|||||++|+.++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 346689999999888775 899999999999988777777532 2447899999999998865 567
Q ss_pred EEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec-cCCCCce---------------
Q 038802 118 QVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL-FGHKDYV--------------- 181 (532)
Q Consensus 118 ~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~v--------------- 181 (532)
.+||+.+++.. .+..|.+.+...+|+| +++.|+.++ |+.|++||+.++...+.. .++...+
T Consensus 95 ~~~d~~~~~~~-~l~~~~~~~~~~~~SP-dG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 95 DIYDLNKRQLI-TEERIPNNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEEETTTTEEC-CSSCCCTTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EEEECCCCcEE-EcccCCCcceeeEECC-CCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 79999988754 4667888999999999 898888885 689999999888765432 2333322
Q ss_pred --EEEEEeCCCCCEEEEEeCCC------------------------------------eEEEEEccc---CCc--eeEEE
Q 038802 182 --RCGDCSPVNGDMFVTGSYDH------------------------------------TVKLWDVRV---ENS--KSVME 218 (532)
Q Consensus 182 --~~i~~~~~~~~~l~s~s~dg------------------------------------~i~iwd~~~---~~~--~~~~~ 218 (532)
.++.|+| +++.|+.++.|. +|++||+.+ +.. .....
T Consensus 172 ~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 172 AYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 3488999 999998875332 478888887 532 12222
Q ss_pred e-----cCCCcEEEEEEecCCCEEEEEc--C---CeEEEEEccCCCe---ee--EEc--cCCCcceE-----EEEEeccC
Q 038802 219 V-----NHGKPIEDVMFLPSGGLIATAG--G---NSVKIWDLIGGGK---MV--YSM--ESHNKTVT-----SVCVGRVG 276 (532)
Q Consensus 219 ~-----~~~~~v~~i~~~~~~~~l~~~~--d---~~i~iwd~~~~~~---~~--~~~--~~~~~~i~-----~~~~~~~~ 276 (532)
. .+...+..++|+|||+.++... + ..|.+||+.++.. +. ..+ ..|...+. ...|+|+|
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG 330 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG 330 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCC
Confidence 1 2677799999999999666553 2 3799999988730 11 111 34555444 78899995
Q ss_pred CCCCccccccEEE-EEe-cC--CeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecC-----CcEEEEeec
Q 038802 277 NESGEEAMQYRIL-SVA-LD--GYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSN-----GTIFAGRRK 344 (532)
Q Consensus 277 ~~~~~~~~~~~l~-s~~-~d--g~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~d-----g~i~iw~~~ 344 (532)
..++ ..+ .+ ..|++||+.+++..........+..+.. +|++.++..+.. +...+|.++
T Consensus 331 ---------~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~ 397 (740)
T 4a5s_A 331 ---------NSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQ 397 (740)
T ss_dssp ---------SEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred ---------CEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEE
Confidence 4444 554 34 4688899988776655545555665542 446655544332 344555443
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.83 E-value=1.2e-18 Score=168.04 Aligned_cols=267 Identities=11% Similarity=0.041 Sum_probs=180.6
Q ss_pred CCCCCcccccccCCCc---cCcc-ccCeeEEEEcCCCCeEEEEE-eCCeEEEEeCCCceEEEEeeccC------ceeEEE
Q 038802 31 SQTPESKYWSSFKPHQ---IPGL-VSSINSIVFSPTTSHLFAAT-HSASLTLFSSQTLEKHSAISSFK------DVVTCS 99 (532)
Q Consensus 31 ~~~~~~~~w~~~~~~~---~~~h-~~~V~~i~~sp~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~~------~~v~~~ 99 (532)
..++.+.+|+.-.... +..+ ...+..++|+|+++++++++ .++.|.+||..+++....+..+. ..+.++
T Consensus 18 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~ 97 (349)
T 1jmx_B 18 NYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSF 97 (349)
T ss_dssp ETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCE
T ss_pred CCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccce
Confidence 3466778888644332 2222 22578999999998766554 57899999999998887765432 237889
Q ss_pred EEccCCCEEEEEcCC------------CCEEEEECCCCce---EEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEE
Q 038802 100 SFRPDGSLLAASDLS------------GLIQVFDVKSRTP---LRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWD 164 (532)
Q Consensus 100 ~~~~~~~~l~~g~~d------------g~i~iwd~~~~~~---~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd 164 (532)
+|+|||+++++++.+ +.|.+||+.+++. +..+. +...+.+++|+| ++. +++++. .|.+||
T Consensus 98 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~-dg~-l~~~~~--~i~~~d 172 (349)
T 1jmx_B 98 AISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAAD-DGS-LYVAGP--DIYKMD 172 (349)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECT-TSC-EEEESS--SEEEEC
T ss_pred EECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECC-CCc-EEEccC--cEEEEe
Confidence 999999999998865 8999999987443 33443 344688999999 777 555543 499999
Q ss_pred CCCCeEEEeccCCCC------------------------ceEEEEEeCCCCCEEEE-EeCCCeEEEEEcccCCceeEEEe
Q 038802 165 VAGESVVLDLFGHKD------------------------YVRCGDCSPVNGDMFVT-GSYDHTVKLWDVRVENSKSVMEV 219 (532)
Q Consensus 165 ~~~~~~~~~~~~~~~------------------------~v~~i~~~~~~~~~l~s-~s~dg~i~iwd~~~~~~~~~~~~ 219 (532)
+.+++....+..+.. ...++++++ ++..... ......+..+|..+++.......
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (349)
T 1jmx_B 173 VKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK-DDKQDPATADLLYGYLSVDLKTGKTHTQEFA 251 (349)
T ss_dssp TTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--------CCCEEEEEEEEEETTTCCEEEEEEE
T ss_pred CCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecC-CCcCCccccccceeEEEEeccCCcEEecccc
Confidence 999988776643320 223455554 2211000 00001122244444332222222
Q ss_pred cCCCcEEEEEEec-CCCEEEEEcCCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEE
Q 038802 220 NHGKPIEDVMFLP-SGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMK 298 (532)
Q Consensus 220 ~~~~~v~~i~~~~-~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~ 298 (532)
.+...+.+++|+| ++++++++ ++.|.+||+.++ +.+..+.. ...+.+++|+|+ +.+|++++.++.|.
T Consensus 252 ~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~-~~~~~~~~-~~~~~~~~~s~d---------g~~l~~~~~~~~v~ 319 (349)
T 1jmx_B 252 DLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQR-KLIKAANL-DHTYYCVAFDKK---------GDKLYLGGTFNDLA 319 (349)
T ss_dssp ECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTT-EEEEEEEC-SSCCCEEEECSS---------SSCEEEESBSSEEE
T ss_pred cCCCcceeeEecCCCCCEEEEE-cCeEEEEECccC-eEEEEEcC-CCCccceEECCC---------CCEEEEecCCCeEE
Confidence 3566788999999 99999888 889999999886 66555543 335678999999 45677788899999
Q ss_pred EEECCCceEEEeeecCC
Q 038802 299 VFDYGKMKVTHSMRFPA 315 (532)
Q Consensus 299 iwd~~~~~~~~~~~~~~ 315 (532)
+||+.+++.+..+..++
T Consensus 320 v~d~~~~~~~~~~~~~~ 336 (349)
T 1jmx_B 320 VFNPDTLEKVKNIKLPG 336 (349)
T ss_dssp EEETTTTEEEEEEECSS
T ss_pred EEeccccceeeeeecCC
Confidence 99999999988887543
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.82 E-value=6.9e-18 Score=163.37 Aligned_cols=271 Identities=11% Similarity=0.018 Sum_probs=192.5
Q ss_pred CCCeEEEEE------eCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEc----------CCCCEEEEECCCC
Q 038802 62 TTSHLFAAT------HSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASD----------LSGLIQVFDVKSR 125 (532)
Q Consensus 62 ~~~~l~~~~------~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~----------~dg~i~iwd~~~~ 125 (532)
+++++++.. .|+.|.+||..+++....+..+..+ .++|+|||+++++++ .++.|.+||..++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 445555554 3679999999999988888776555 899999999999886 2567999999998
Q ss_pred ceEEEecCC------CCCEEEEEeecCCCcEEEEEeC--CCeEEEEECCCCeEEEe-ccCCCCceEEEEEeCCCCCEEEE
Q 038802 126 TPLRRLKSH------TRPVRFVKYPFLDKLHLVSGGD--DGIVKFWDVAGESVVLD-LFGHKDYVRCGDCSPVNGDMFVT 196 (532)
Q Consensus 126 ~~~~~~~~h------~~~i~~~~~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~i~~~~~~~~~l~s 196 (532)
+.+..+... ......++|+| ++++|+++.. +++|.+||+.+++.+.. +.. .. ...+.+.|.....+++
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~-~~~v~~~p~~~~~~~~ 168 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-AG-CWSVIPQPNRPRSFMT 168 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-TT-EEEEEECTTSSSEEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-CC-cceeEEcCCCCeeEEE
Confidence 888777532 24467799999 8888888764 68999999999998887 543 22 2235567744578888
Q ss_pred EeCCCeEEEEEcccCCcee-EEE----e-cCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCe-eeEEccCC-----
Q 038802 197 GSYDHTVKLWDVRVENSKS-VME----V-NHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGK-MVYSMESH----- 263 (532)
Q Consensus 197 ~s~dg~i~iwd~~~~~~~~-~~~----~-~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~-~~~~~~~~----- 263 (532)
.+.||.+.+|++....... ... + ....++ .+.+++++..++..+ ++.+.++|+..... ....+...
T Consensus 169 ~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~ 247 (361)
T 2oiz_A 169 ICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDK 247 (361)
T ss_dssp EETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHH
T ss_pred ECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccc
Confidence 9999999999986522221 111 0 111222 334467776666666 88999999865422 12211100
Q ss_pred -C----cceEEEEEeccCCCCCccccccEEEEEec-----------CCeEEEEECCCceEEEeeecCCCeeEEEEecCCC
Q 038802 264 -N----KTVTSVCVGRVGNESGEEAMQYRILSVAL-----------DGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCM 327 (532)
Q Consensus 264 -~----~~i~~~~~~~~~~~~~~~~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~ 327 (532)
. .....++++|++ ..++++.. ++.|.+||+.+++.+..+.... +.+++|+|||+
T Consensus 248 ~~~~~p~g~~~~a~~~dg---------~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~ 317 (361)
T 2oiz_A 248 AKNWVPGGYNLVGLHRAS---------GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRN 317 (361)
T ss_dssp HTTCEECCSSCEEEETTT---------TEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTT
T ss_pred ccccccCCeeEEEEecCC---------CeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCC
Confidence 0 111126788884 44444432 3589999999999999998666 99999999999
Q ss_pred EEEEEecCCcEEEEeecCc--ccc
Q 038802 328 TRVIGTSNGTIFAGRRKKK--ENV 349 (532)
Q Consensus 328 ~l~~g~~dg~i~iw~~~~~--~~~ 349 (532)
+|++++. +.|.+||..+. +..
T Consensus 318 ~l~v~n~-~~v~v~D~~t~~l~~~ 340 (361)
T 2oiz_A 318 LMLTLDG-GNVNVYDISQPEPKLL 340 (361)
T ss_dssp EEEEECS-SCEEEEECSSSSCEEE
T ss_pred EEEEeCC-CeEEEEECCCCcceee
Confidence 9998887 99999999987 554
No 167
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.82 E-value=1.4e-17 Score=159.64 Aligned_cols=267 Identities=13% Similarity=0.108 Sum_probs=193.7
Q ss_pred cCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEe
Q 038802 52 SSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRL 131 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 131 (532)
..|.++.|+|++..++..+.++.++.| .+.....+..+...+.+++|+++|++++++..++.|.+||..+++.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 357788899988877777778888888 34556666667777899999999998888888999999999887765554
Q ss_pred cCCCCCEEEEEeecCCCcEEEEEeCC----CeEEEEECCCCeEEEecc--CCCCceEEEEEeCCCCCEEEEEeC------
Q 038802 132 KSHTRPVRFVKYPFLDKLHLVSGGDD----GIVKFWDVAGESVVLDLF--GHKDYVRCGDCSPVNGDMFVTGSY------ 199 (532)
Q Consensus 132 ~~h~~~i~~~~~~~~~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~l~s~s~------ 199 (532)
..+...+.+++|++ ++.+++++..+ +.|.+||..++.....+. .+...+.+++++| +++++++...
T Consensus 83 ~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 83 VSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNP 160 (333)
T ss_dssp ECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBC
T ss_pred eCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCC
Confidence 45677899999998 78777776666 689999998776543332 3456789999999 8888777654
Q ss_pred CCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEE-c-CCeEEEEEccCCCeeeE--------EccCCCcceEE
Q 038802 200 DHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATA-G-GNSVKIWDLIGGGKMVY--------SMESHNKTVTS 269 (532)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~-d~~i~iwd~~~~~~~~~--------~~~~~~~~i~~ 269 (532)
.+.|..+|..+++..... .....+..++|+|+++.++.+ . ++.|.+||+.+.+.... .+.++ ..+..
T Consensus 161 ~~~l~~~~~~~~~~~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~ 237 (333)
T 2dg1_A 161 LGGVYYVSPDFRTVTPII--QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDS 237 (333)
T ss_dssp CEEEEEECTTSCCEEEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEE
T ss_pred CceEEEEeCCCCEEEEee--cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCc
Confidence 355666665543332222 223457889999999855444 4 68999999864222211 12222 46788
Q ss_pred EEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecCC-------CeeEEEEecCCCEEEEEecCC
Q 038802 270 VCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPA-------PLMSVAFSPDCMTRVIGTSNG 336 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------~v~~~~~s~~~~~l~~g~~dg 336 (532)
++++++ +.++++...++.|.+||. +++.+..+..+. .+.+++|+||++.|++++.+|
T Consensus 238 i~~d~~---------G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 238 CCIDSD---------DNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEEBTT---------CCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred eEECCC---------CCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 999988 556667677899999998 466666665432 589999999988887777664
No 168
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.81 E-value=3e-17 Score=158.28 Aligned_cols=256 Identities=12% Similarity=0.098 Sum_probs=183.2
Q ss_pred CeeEEEEcCCCCeEEEEE---------eCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCC---C--CEE
Q 038802 53 SINSIVFSPTTSHLFAAT---------HSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLS---G--LIQ 118 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~~~~---------~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d---g--~i~ 118 (532)
.+....+ ||++++... .++.|++||..+++... + ..+..++|+|||++|+.++.+ + .|.
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 5667777 888887653 25689999998876543 3 567889999999999987643 3 488
Q ss_pred EEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeC---------------------------CCeEEEEECCCCeEE
Q 038802 119 VFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGD---------------------------DGIVKFWDVAGESVV 171 (532)
Q Consensus 119 iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~---------------------------dg~i~iwd~~~~~~~ 171 (532)
+|++.+++.......+ . +..+.|+| +++.|+.++. ...|.+||+.+++.+
T Consensus 89 ~~~~~~g~~~~l~~~~-~-~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 89 VADLETLSSKKILEAK-N-IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EEETTTTEEEEEEEES-E-EEEEEECT-TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EEECCCCceEEEEcCC-C-ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 8898887765554433 3 99999999 8887877763 257999999988774
Q ss_pred EeccCCCCceEEEEEeCCCCCEEEEEeCCC-------eEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C-
Q 038802 172 LDLFGHKDYVRCGDCSPVNGDMFVTGSYDH-------TVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G- 242 (532)
Q Consensus 172 ~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg-------~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d- 242 (532)
..+.. . .+..+.|+| ++ ++++++.++ ...+|.+.++ ....+. .+ ..+.++ +|+|+.|+.++ +
T Consensus 166 ~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~l~-~~-~~~~~~--spdg~~l~~~~~~~ 236 (347)
T 2gop_A 166 EEFEK-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWEDG-KEEKMF-EK-VSFYAV--DSDGERILLYGKPE 236 (347)
T ss_dssp EEEEE-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEETT-EEEEEE-EE-ESEEEE--EECSSCEEEEECCS
T ss_pred eeecC-C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeCCC-ceEEec-cC-cceeeE--CCCCCEEEEEEccc
Confidence 44444 3 788999999 88 777776542 3455554432 222222 23 445444 99999877665 3
Q ss_pred -------CeEEEEEccCCCeeeEEccCCCcceEE-EEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecC
Q 038802 243 -------NSVKIWDLIGGGKMVYSMESHNKTVTS-VCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFP 314 (532)
Q Consensus 243 -------~~i~iwd~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 314 (532)
..|.+|| ++ ........+...+.. +.|+ + + ++++++.++.+++| +.+++......+.
T Consensus 237 ~~~~~~~~~l~~~d--~~-~~~~l~~~~~~~~~~~~~~s-d---------g-~~~~~~~~~~~~l~-~~~g~~~~~~~~~ 301 (347)
T 2gop_A 237 KKYMSEHNKLYIYD--GK-EVMGILDEVDRGVGQAKIKD-G---------K-VYFTLFEEGSVNLY-IWDGEIKPIAKGR 301 (347)
T ss_dssp SSCCCSSCEEEEEC--SS-CEEESSTTCCSEEEEEEEET-T---------E-EEEEEEETTEEEEE-EESSSEEEEECSS
T ss_pred cCCccccceEEEEC--CC-ceEeccccCCcccCCccEEc-C---------c-EEEEEecCCcEEEE-EcCCceEEEecCC
Confidence 2677787 33 444445566778886 8898 6 6 88999999999999 8777766656667
Q ss_pred CCeeEEEEecCCCEEEEEecCCcE-EEEeec
Q 038802 315 APLMSVAFSPDCMTRVIGTSNGTI-FAGRRK 344 (532)
Q Consensus 315 ~~v~~~~~s~~~~~l~~g~~dg~i-~iw~~~ 344 (532)
..|.+++|+| ..+++++.++.. .+|.++
T Consensus 302 ~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 302 HWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp SEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred CeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 7899999999 677777777764 777765
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.81 E-value=2e-17 Score=160.09 Aligned_cols=276 Identities=13% Similarity=0.074 Sum_probs=198.5
Q ss_pred CCCcccccccCCC---ccCccccCeeEEEEcCCCCeEEEEEe----------CCeEEEEeCCCceEEEEeecc------C
Q 038802 33 TPESKYWSSFKPH---QIPGLVSSINSIVFSPTTSHLFAATH----------SASLTLFSSQTLEKHSAISSF------K 93 (532)
Q Consensus 33 ~~~~~~w~~~~~~---~~~~h~~~V~~i~~sp~~~~l~~~~~----------d~~v~i~~~~~~~~~~~~~~~------~ 93 (532)
+..+.+|+.-... .++.+..+ .++|+||+++++++.. ++.|.+||..+++....+... .
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g 107 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL 107 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC
T ss_pred cCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC
Confidence 3456677643322 23444445 8999999999998873 578999999999888887643 2
Q ss_pred ceeEEEEEccCCCEEEEEcC--CCCEEEEECCCCceEEE-ecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCC-Ce
Q 038802 94 DVVTCSSFRPDGSLLAASDL--SGLIQVFDVKSRTPLRR-LKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAG-ES 169 (532)
Q Consensus 94 ~~v~~~~~~~~~~~l~~g~~--dg~i~iwd~~~~~~~~~-~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~-~~ 169 (532)
.....++|+|||++|+++.. +++|.+||+.+++.+.. +.. . ....+.+.|.....+++.+.||.+.+|+... ++
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~ 185 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK 185 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSS
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCc
Confidence 45677899999999998863 57899999999988877 653 2 2233556674557888999999999999865 54
Q ss_pred EEE------eccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEec--------C---CCcEEEEEEec
Q 038802 170 VVL------DLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVN--------H---GKPIEDVMFLP 232 (532)
Q Consensus 170 ~~~------~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--------~---~~~v~~i~~~~ 232 (532)
... .+..+..++ .+.+++ ++..++..+.++.+.++|+............ . ......++|+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~-~~~~~~-~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~ 263 (361)
T 2oiz_A 186 VASQSRSKQMFSVKDDPI-FIAPAL-DKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR 263 (361)
T ss_dssp EEEEEECCCCSCTTTSCB-CSCCEE-CSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET
T ss_pred EeeeccccceEcCCCCce-EEEecc-cCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec
Confidence 431 222223332 334456 6677777788999999998754322221110 0 01112378999
Q ss_pred CCCEEEEEc------------CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEE
Q 038802 233 SGGLIATAG------------GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVF 300 (532)
Q Consensus 233 ~~~~l~~~~------------d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iw 300 (532)
++..++++. ++.|.+||+.+. +.+.++..+. ..+++|+|+ +.++++++. +.|.+|
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~-~~v~~i~~~~--p~~ia~spd---------g~~l~v~n~-~~v~v~ 330 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK-QRVARIPGRD--ALSMTIDQQ---------RNLMLTLDG-GNVNVY 330 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT-EEEEEEECTT--CCEEEEETT---------TTEEEEECS-SCEEEE
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCCC-cEEEEEecCC--eeEEEECCC---------CCEEEEeCC-CeEEEE
Confidence 987666542 248999999887 8888887776 899999999 567887776 999999
Q ss_pred ECCCc--eEEEee-ecCCCeeEEEEecCCC
Q 038802 301 DYGKM--KVTHSM-RFPAPLMSVAFSPDCM 327 (532)
Q Consensus 301 d~~~~--~~~~~~-~~~~~v~~~~~s~~~~ 327 (532)
|..++ +.+..+ ........++++|+|.
T Consensus 331 D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 331 DISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred ECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 99999 999887 5677889999999985
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.81 E-value=3.5e-18 Score=180.05 Aligned_cols=288 Identities=11% Similarity=0.015 Sum_probs=194.9
Q ss_pred CccCccccCeeEEEEcCCCCeEEEE--EeCCeEEEEeCCCceEEEEeeccCceeE---------EEEEc--cCCCE-EEE
Q 038802 45 HQIPGLVSSINSIVFSPTTSHLFAA--THSASLTLFSSQTLEKHSAISSFKDVVT---------CSSFR--PDGSL-LAA 110 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~~l~~~--~~d~~v~i~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~~ 110 (532)
..+.+|...|..++|++++-+++.. +.++...||....+.....+..+...+. ...|+ |||+. |+.
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 3456788999999999875444544 3378899998554555666766665555 55565 99998 776
Q ss_pred EcC-CCCEEEEECC--CCceEEEecC-----CCCCEEEEEeecCCCcEEEEEeCC----------CeEEEEECCC-----
Q 038802 111 SDL-SGLIQVFDVK--SRTPLRRLKS-----HTRPVRFVKYPFLDKLHLVSGGDD----------GIVKFWDVAG----- 167 (532)
Q Consensus 111 g~~-dg~i~iwd~~--~~~~~~~~~~-----h~~~i~~~~~~~~~~~~l~s~s~d----------g~i~iwd~~~----- 167 (532)
++. +..|.++++. .......+.. |...+.+++|+| +++.|++++.| ..|++||+.+
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred EECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 653 5667777765 2033455555 667789999999 89999988877 5899999988
Q ss_pred -CeEEEecc-CCCCceEEEEEeCCCCCEEEEEeCC--------CeEEEEEcc-cCC--ceeEEEecCCCcEEEEEEecCC
Q 038802 168 -ESVVLDLF-GHKDYVRCGDCSPVNGDMFVTGSYD--------HTVKLWDVR-VEN--SKSVMEVNHGKPIEDVMFLPSG 234 (532)
Q Consensus 168 -~~~~~~~~-~~~~~v~~i~~~~~~~~~l~s~s~d--------g~i~iwd~~-~~~--~~~~~~~~~~~~v~~i~~~~~~ 234 (532)
++.. .+. .+...+..++|+| +++.|+.++.+ ..|++||+. ++. ....+...+...+..+.|+|+|
T Consensus 176 ~~~~~-~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg 253 (662)
T 3azo_A 176 RSAVR-ELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDG 253 (662)
T ss_dssp GGGSE-ESSCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTS
T ss_pred CCcee-EEEecCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCC
Confidence 5544 444 5667788899999 99999887755 379999998 442 2233333557889999999999
Q ss_pred CEEEEEc-CC--eEEEEEccCCCeeeEEccCCCcc--------eEEEEEeccCCCCCccccccEEEEEecCCeEEEE--E
Q 038802 235 GLIATAG-GN--SVKIWDLIGGGKMVYSMESHNKT--------VTSVCVGRVGNESGEEAMQYRILSVALDGYMKVF--D 301 (532)
Q Consensus 235 ~~l~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iw--d 301 (532)
+++++++ ++ .|.+||+.++ ........+... +..++|+++ +.++++++. +.+++| |
T Consensus 254 ~l~~~~~~~~~~~l~~~~~~~~-~~~~l~~~~~~~~~p~w~~~~~~~~~~~~---------~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 254 SLIVATDRTGWWNLHRVDPATG-AATQLCRREEEFAGPLWTPGMRWFAPLAN---------GLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp CEEEEECTTSSCEEEEECTTTC-CEEESSCCSSBSSCCCCSTTCCSEEECTT---------SCEEEEEBS-SSCEEEEEE
T ss_pred eEEEEECCCCCeEEEEEECCCC-ceeecccccccccCccccccCceEeEeCC---------CEEEEEEEc-CccEEEEEE
Confidence 9777777 66 6666676454 333333322221 456778777 578888888 999999 6
Q ss_pred CCCceEEEeee-cCCCeeEE-EEecCCCEEEEEecCCc--EEEEeecCcc
Q 038802 302 YGKMKVTHSMR-FPAPLMSV-AFSPDCMTRVIGTSNGT--IFAGRRKKKE 347 (532)
Q Consensus 302 ~~~~~~~~~~~-~~~~v~~~-~~s~~~~~l~~g~~dg~--i~iw~~~~~~ 347 (532)
+.+++. ..+. +...+..+ +++++.-.+++++.+.. |+.|+..+++
T Consensus 323 ~~~~~~-~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 323 PESGEL-VDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp TTTTEE-EECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CCCCcE-EEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 666664 4444 45566666 44443333444455544 4445544543
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=7.1e-17 Score=154.43 Aligned_cols=247 Identities=11% Similarity=0.016 Sum_probs=182.7
Q ss_pred ceeEEEEEccCCCEEEEEcCC------------------------CCEEEEECCCCceEEEec-CCCCCEEEEEeecCCC
Q 038802 94 DVVTCSSFRPDGSLLAASDLS------------------------GLIQVFDVKSRTPLRRLK-SHTRPVRFVKYPFLDK 148 (532)
Q Consensus 94 ~~v~~~~~~~~~~~l~~g~~d------------------------g~i~iwd~~~~~~~~~~~-~h~~~i~~~~~~~~~~ 148 (532)
+.+.+++++|+|+++++...+ +.|.+||..+++.+..+. ++......+++++ ++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~-~g 102 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT-DG 102 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT-TS
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC-CC
Confidence 578999999999999888766 479999999888877665 4556789999998 88
Q ss_pred cEEEEEeCCCeEEEEECCCCe-EEEec---------cCCCCceEEEEEeCCCCCEEEEEe-CCCeEEEEEcccCCceeEE
Q 038802 149 LHLVSGGDDGIVKFWDVAGES-VVLDL---------FGHKDYVRCGDCSPVNGDMFVTGS-YDHTVKLWDVRVENSKSVM 217 (532)
Q Consensus 149 ~~l~s~s~dg~i~iwd~~~~~-~~~~~---------~~~~~~v~~i~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~ 217 (532)
.++++.+.++.|++||..... .+..+ ..+-.....++++|.++.++++.+ .++.|++||. ++.....+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEe
Confidence 888888889999999986542 33433 234456889999985677778776 6899999994 33333333
Q ss_pred Eec---------CCCcEEEEEEecC-CCEEEEEc-CCeEEEEEccCCCeeeEEc--cCCCcceEEEEEeccCCCCCcccc
Q 038802 218 EVN---------HGKPIEDVMFLPS-GGLIATAG-GNSVKIWDLIGGGKMVYSM--ESHNKTVTSVCVGRVGNESGEEAM 284 (532)
Q Consensus 218 ~~~---------~~~~v~~i~~~~~-~~~l~~~~-d~~i~iwd~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~ 284 (532)
... +-.....++++|+ +.++++.. ++.|++||..++ +.+..+ ..+...+..++++| +. .....
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~p-g~--~~~~~ 257 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK-EFVREIKHASFGRNVFAISYIP-GF--LFAVN 257 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC-CEEEEECCTTTTTCEEEEEEET-TE--EEEEE
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC-cEEEEEeccccCCCcceeeecC-CE--EEEeC
Confidence 211 1123789999998 66666666 789999998755 666665 34566788999988 20 00000
Q ss_pred ccEEEEEecCCeEEEEECCCceEEEeee----cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCc
Q 038802 285 QYRILSVALDGYMKVFDYGKMKVTHSMR----FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 285 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~ 346 (532)
+..+++...+..|++||..+++.+..+. +...+.+++++|+|..+++...++.|++|+....
T Consensus 258 g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 2233333445689999999999998874 4456899999999988888889999999998754
No 172
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.79 E-value=8.3e-18 Score=164.90 Aligned_cols=257 Identities=12% Similarity=0.079 Sum_probs=183.1
Q ss_pred EEeCCCceEEEEeeccCceeEE-----EEEccCCCEEEEEcC-CCC--EEEEECCCCceEEEecCCCCCEEEEEeecCCC
Q 038802 77 LFSSQTLEKHSAISSFKDVVTC-----SSFRPDGSLLAASDL-SGL--IQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDK 148 (532)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~g~~-dg~--i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~ 148 (532)
.++..++.....+..|...... .+|+|||++|+.++. +|. |.+||+.+++......++...+....|+| ++
T Consensus 14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp-dg 92 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP-DD 92 (388)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT-TS
T ss_pred EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcC-CC
Confidence 4577788888888887766665 789999999998876 663 88889998887777766666665678999 99
Q ss_pred cEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEE--eCCCCCEEEEE----------------------eCCCeEE
Q 038802 149 LHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDC--SPVNGDMFVTG----------------------SYDHTVK 204 (532)
Q Consensus 149 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~--~~~~~~~l~s~----------------------s~dg~i~ 204 (532)
+.|+.++.++.|++||+.+++.......+...+....+ +| ++..++.. +.++.|.
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLM 171 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEE
Confidence 99999999999999999999877666666665544443 67 78877642 2446899
Q ss_pred EEEcccCCceeEEEecCCCcEEEEEEec-CCCEEEEEc-CC------eEEEEEccCCCeeeEEccCCC--cceEEEEEec
Q 038802 205 LWDVRVENSKSVMEVNHGKPIEDVMFLP-SGGLIATAG-GN------SVKIWDLIGGGKMVYSMESHN--KTVTSVCVGR 274 (532)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~-d~------~i~iwd~~~~~~~~~~~~~~~--~~i~~~~~~~ 274 (532)
+||+.+++..... .+...+..+.|+| +|+.|+.+. ++ .|.++|.... ....+..+. ..+....|+|
T Consensus 172 ~~d~~~g~~~~l~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~~~~~~~~sp 247 (388)
T 3pe7_A 172 RVDLKTGESTVIL--QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT--NMRKVKTHAEGESCTHEFWVP 247 (388)
T ss_dssp EEETTTCCEEEEE--EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC--CCEESCCCCTTEEEEEEEECT
T ss_pred EEECCCCceEEee--cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC--ceEEeeeCCCCcccccceECC
Confidence 9999886543333 4566789999999 999887765 22 6777776544 334444444 3578899999
Q ss_pred cCCCCCccccccEEEE-EecCC----eEEEEECCCceEEEeeecCC------CeeEEEEecCCCEEEEE---------ec
Q 038802 275 VGNESGEEAMQYRILS-VALDG----YMKVFDYGKMKVTHSMRFPA------PLMSVAFSPDCMTRVIG---------TS 334 (532)
Q Consensus 275 ~~~~~~~~~~~~~l~s-~~~dg----~i~iwd~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~~g---------~~ 334 (532)
+| ..|+. +..++ .|++||+.+++.......+. .....+|+|||+.|+.. ..
T Consensus 248 dg---------~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 318 (388)
T 3pe7_A 248 DG---------SALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN 318 (388)
T ss_dssp TS---------SCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CC
T ss_pred CC---------CEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCC
Confidence 95 44443 33322 39999999987544333222 12224799999988754 45
Q ss_pred CCcEEEEeecCccc
Q 038802 335 NGTIFAGRRKKKEN 348 (532)
Q Consensus 335 dg~i~iw~~~~~~~ 348 (532)
++.|++|+..+++.
T Consensus 319 ~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 319 DPFLYVFNMKNGTQ 332 (388)
T ss_dssp CCEEEEEETTTTEE
T ss_pred CCEEEEEeccCCce
Confidence 66899999988654
No 173
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.79 E-value=4.3e-15 Score=139.74 Aligned_cols=280 Identities=8% Similarity=-0.030 Sum_probs=197.5
Q ss_pred cCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEE-eeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCC
Q 038802 47 IPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSA-ISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSR 125 (532)
Q Consensus 47 ~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 125 (532)
++.+...+.+++++++|..+++...++.|.+||.. +..... ...+...+.++++.++|.+.++...++.|..||.. +
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 44556789999999999866554447899999988 544332 22345678999999999988887778889999976 3
Q ss_pred ceE-EEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEE-eccCCCCceEEEEEeCCCCCEEEEEeCCCeE
Q 038802 126 TPL-RRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVL-DLFGHKDYVRCGDCSPVNGDMFVTGSYDHTV 203 (532)
Q Consensus 126 ~~~-~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i 203 (532)
+.. ..+......+.++++.+ ++.++++...++.|..||. +++... ....+...+.++++.+ ++.++++...++.|
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGS-DNALWFTENQNNAI 164 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEE
T ss_pred cEEEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcC-CCCEEEEeCCCCEE
Confidence 321 22223456789999998 7877777777889999998 554432 2333456788999998 88888877777899
Q ss_pred EEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCcc
Q 038802 204 KLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEE 282 (532)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 282 (532)
..||. +++............+.+++++++|.+.++.. ++.|.+||. ++.........+...+.+++++++
T Consensus 165 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~------- 235 (299)
T 2z2n_A 165 GRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAG------- 235 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECST-------
T ss_pred EEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCC-------
Confidence 99998 54433221223445688999999999877776 789999998 553222233445567889999988
Q ss_pred ccccEEEEEecCCeEEEEECCCceEEEeee---cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCc
Q 038802 283 AMQYRILSVALDGYMKVFDYGKMKVTHSMR---FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 283 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~ 346 (532)
+.++++...++.|..||. +++.. .+. ....+.++++ ++|...++.. .+.|..++.++.
T Consensus 236 --g~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 236 --IDLWFTEWGANKIGRLTS-NNIIE-EYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp --TCEEEEETTTTEEEEEET-TTEEE-EEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC--
T ss_pred --CCEEEeccCCceEEEECC-CCceE-EEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCcc
Confidence 455555557789999998 45433 332 2357899999 8888766655 567777776654
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=2.9e-16 Score=147.02 Aligned_cols=238 Identities=11% Similarity=0.071 Sum_probs=176.1
Q ss_pred cCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEec------CCCCCEEEEEeecCCCcEEEEEeC-CCeEEEEE
Q 038802 92 FKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLK------SHTRPVRFVKYPFLDKLHLVSGGD-DGIVKFWD 164 (532)
Q Consensus 92 ~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~------~h~~~i~~~~~~~~~~~~l~s~s~-dg~i~iwd 164 (532)
+-..+.+++++++++++++...++.|.+||.. ++.+..+. ++...+.++++.+.++.++++... ++.|.+||
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 34578999999999988888889999999987 56666553 244578999995426666665543 88999999
Q ss_pred CCCCeEEEecc-CCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEe-cCCCcEEEEEEecCCCEEEEEc-
Q 038802 165 VAGESVVLDLF-GHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEV-NHGKPIEDVMFLPSGGLIATAG- 241 (532)
Q Consensus 165 ~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~- 241 (532)
.+++.+..+. .+...+.+++++| +++++++...++.|.+||... +....+.. .+...+.+++++|+|+++++..
T Consensus 107 -~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp -TTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTTS-CEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred -CCCcEEEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCCC-CEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 5666666553 3446788999999 888888888889999999653 33333221 3445689999999999888776
Q ss_pred CCeEEEEEccCCCeeeEEccCC--CcceEEEEEeccCCCCCccccccEEEEEecCC-eEEEEECCCceEEEeeecC---C
Q 038802 242 GNSVKIWDLIGGGKMVYSMESH--NKTVTSVCVGRVGNESGEEAMQYRILSVALDG-YMKVFDYGKMKVTHSMRFP---A 315 (532)
Q Consensus 242 d~~i~iwd~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~---~ 315 (532)
++.|.+||... ..+..+..+ ...+..++++++ +.++++...++ .|.+||. +++.+..+... .
T Consensus 184 ~~~i~~~~~~g--~~~~~~~~~g~~~~p~~i~~d~~---------G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~ 251 (286)
T 1q7f_A 184 AHCVKVFNYEG--QYLRQIGGEGITNYPIGVGINSN---------GEILIADNHNNFNLTIFTQ-DGQLISALESKVKHA 251 (286)
T ss_dssp GTEEEEEETTC--CEEEEESCTTTSCSEEEEEECTT---------CCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCS
T ss_pred CCEEEEEcCCC--CEEEEEccCCccCCCcEEEECCC---------CCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCC
Confidence 78999999743 445555433 357889999998 56777777775 9999995 45555555522 2
Q ss_pred CeeEEEEecCCCEEEEEecCCcEEEEeecCc
Q 038802 316 PLMSVAFSPDCMTRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 316 ~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~ 346 (532)
.+.+++++|+|+++++ +.|+.|++|++...
T Consensus 252 ~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 252 QCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp CEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred cceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 4789999999987766 67999999997643
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.79 E-value=9.8e-17 Score=153.43 Aligned_cols=241 Identities=11% Similarity=0.119 Sum_probs=183.5
Q ss_pred ccCeeEEEEcCCCCeEEEEEeC------------------------CeEEEEeCCCceEEEEee-ccCceeEEEEEccCC
Q 038802 51 VSSINSIVFSPTTSHLFAATHS------------------------ASLTLFSSQTLEKHSAIS-SFKDVVTCSSFRPDG 105 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d------------------------~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 105 (532)
.+.+.+++++|+|+++++...+ +.|.+||..+++....+. .+-.....++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999877776666 379999998888876654 334578999999999
Q ss_pred CEEEEEcCCCCEEEEECCCCc-eEEEe---------cCCCCCEEEEEeecCCCcEEEEEe-CCCeEEEEECCCCeEEEec
Q 038802 106 SLLAASDLSGLIQVFDVKSRT-PLRRL---------KSHTRPVRFVKYPFLDKLHLVSGG-DDGIVKFWDVAGESVVLDL 174 (532)
Q Consensus 106 ~~l~~g~~dg~i~iwd~~~~~-~~~~~---------~~h~~~i~~~~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~ 174 (532)
+++++...++.|++||..... .+..+ .++......++++|.++.++++.+ .++.|++|| .++..+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 988888889999999986542 45555 344557899999985677777776 689999999 556666665
Q ss_pred cC----------CCCceEEEEEeCCC-CCEEEEEeCCCeEEEEEcccCCceeEEEe-cCCCcEEEEEEecCCCEEEEEc-
Q 038802 175 FG----------HKDYVRCGDCSPVN-GDMFVTGSYDHTVKLWDVRVENSKSVMEV-NHGKPIEDVMFLPSGGLIATAG- 241 (532)
Q Consensus 175 ~~----------~~~~v~~i~~~~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~- 241 (532)
.. +-.....++++| + +.++++...++.|++||..+++....+.. .+...+.+++++| +..+++.+
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~-~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~ 259 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVP-HLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGK 259 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEET-TTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECC
T ss_pred ccCCCCCCCCCcccCCCcEEEEEC-CCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCC
Confidence 32 223478999999 6 78888888899999999986655544432 3566788999999 43333332
Q ss_pred -------CCeEEEEEccCCCeeeEEc---cCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 242 -------GNSVKIWDLIGGGKMVYSM---ESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 242 -------d~~i~iwd~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
+..|++||..++ +.+..+ ..+.....+++++|+ +.++++...++.|++|++..
T Consensus 260 ~~v~~~~~~~v~~~~~~~g-~~~~~~~~~~~~~~~p~~ia~~~d---------G~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSG-EIIDVFKPVRKHFDMPHDIVASED---------GTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCTTCSCCCCEEEEETTTC-CEEEEECCSSSCCSSEEEEEECTT---------SEEEEEESSSCCEEEEEEEE
T ss_pred EEeccCCCcEEEEEEcCCC-eEEEEEcCCCCccCCeeEEEECCC---------CCEEEEECCCCEEEEEeCCc
Confidence 348999998877 666666 356677899999998 66788888899999999753
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=2.1e-16 Score=147.92 Aligned_cols=240 Identities=13% Similarity=0.155 Sum_probs=177.8
Q ss_pred cCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeec------cCceeEEEEE-ccCCCEEEEEcC-CCCEE
Q 038802 47 IPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISS------FKDVVTCSSF-RPDGSLLAASDL-SGLIQ 118 (532)
Q Consensus 47 ~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~------~~~~v~~~~~-~~~~~~l~~g~~-dg~i~ 118 (532)
-.++...+.+++++|++.++++.+.++.|.+||.. ++....+.. +...+.++++ .+++.++++... ++.|.
T Consensus 25 ~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 25 MEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp STTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CCCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 35677889999999999877777778999999977 555555532 3357889999 467776666643 78999
Q ss_pred EEECCCCceEEEec-CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEecc--CCCCceEEEEEeCCCCCEEE
Q 038802 119 VFDVKSRTPLRRLK-SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLF--GHKDYVRCGDCSPVNGDMFV 195 (532)
Q Consensus 119 iwd~~~~~~~~~~~-~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~l~ 195 (532)
+|| .+++.+..+. .+...+.++++++ ++.++++...++.|.+||.. ++.+..+. .+...+.++++++ ++++++
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~-~g~l~v 179 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVND-KQEIFI 179 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECS-SSEEEE
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECC-CCCEEE
Confidence 999 5667666664 3446789999999 78877777788999999965 55555543 3455688999999 888888
Q ss_pred EEeCCCeEEEEEcccCCceeEEEe-cCCCcEEEEEEecCCCEEEEEc-CC-eEEEEEccCCCeeeEEccCCC--cceEEE
Q 038802 196 TGSYDHTVKLWDVRVENSKSVMEV-NHGKPIEDVMFLPSGGLIATAG-GN-SVKIWDLIGGGKMVYSMESHN--KTVTSV 270 (532)
Q Consensus 196 s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~-d~-~i~iwd~~~~~~~~~~~~~~~--~~i~~~ 270 (532)
+.+.++.|++||... .....+.. ++...+..++++++|+++++.. ++ .|.+||.. + ..+..+..+. ..+.++
T Consensus 180 ~~~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g-~~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 180 SDNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-G-QLISALESKVKHAQCFDV 256 (286)
T ss_dssp EEGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-S-CEEEEEEESSCCSCEEEE
T ss_pred EECCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-C-CEEEEEcccCCCCcceeE
Confidence 888899999999753 22222221 1225788999999999888887 55 99999954 3 4455554433 347799
Q ss_pred EEeccCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 271 CVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
+++|+ +.++++ +.|+.|++|++..
T Consensus 257 ~~~~~---------g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 257 ALMDD---------GSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEETT---------TEEEEE-ETTTEEEEEECSC
T ss_pred EECCC---------CcEEEE-CCCCeEEEEEccc
Confidence 99998 455555 6799999999765
No 177
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.79 E-value=1.6e-16 Score=169.22 Aligned_cols=300 Identities=9% Similarity=0.007 Sum_probs=201.2
Q ss_pred CCCcccccccCCCc---cCcccc-----CeeEEEEcCCCCeEEEEEeC---------CeEEEEeCCCceEEEEeeccCce
Q 038802 33 TPESKYWSSFKPHQ---IPGLVS-----SINSIVFSPTTSHLFAATHS---------ASLTLFSSQTLEKHSAISSFKDV 95 (532)
Q Consensus 33 ~~~~~~w~~~~~~~---~~~h~~-----~V~~i~~sp~~~~l~~~~~d---------~~v~i~~~~~~~~~~~~~~~~~~ 95 (532)
++.+.+|+.-.... +.+|.. ....++|||||++++.++.+ +.+.+||+.+++.. .+..|.+.
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~ 113 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNN 113 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTT
T ss_pred CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCc
Confidence 56788888654332 244432 33458899999999998876 56779999998754 46667788
Q ss_pred eEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEe-cCCCCCE-----------------EEEEeecCCCcEEEEEeCC
Q 038802 96 VTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRL-KSHTRPV-----------------RFVKYPFLDKLHLVSGGDD 157 (532)
Q Consensus 96 v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~-~~h~~~i-----------------~~~~~~~~~~~~l~s~s~d 157 (532)
+...+|||||+.||.+. ++.|++|++.++...+.. .++...+ ..+.|+| |++.|+.++.|
T Consensus 114 ~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d 191 (740)
T 4a5s_A 114 TQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFN 191 (740)
T ss_dssp EEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEE
T ss_pred ceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECC-CCCEEEEEEEc
Confidence 99999999999999885 789999999887755422 2333323 3488999 99988887532
Q ss_pred C------------------------------------eEEEEECCC---C---eEEEecc-----CCCCceEEEEEeCCC
Q 038802 158 G------------------------------------IVKFWDVAG---E---SVVLDLF-----GHKDYVRCGDCSPVN 190 (532)
Q Consensus 158 g------------------------------------~i~iwd~~~---~---~~~~~~~-----~~~~~v~~i~~~~~~ 190 (532)
. .|++||+.+ + +...... +|...+..++|+| +
T Consensus 192 ~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp-d 270 (740)
T 4a5s_A 192 DTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT-Q 270 (740)
T ss_dssp CTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE-T
T ss_pred ccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC-C
Confidence 1 588899988 7 3333222 3788899999999 8
Q ss_pred CCEEEEEeC----CCeEEEEEcccCC-------ceeEEEecCCCcEE-----EEEEecCCCEEE-EEc--CC--eEEEEE
Q 038802 191 GDMFVTGSY----DHTVKLWDVRVEN-------SKSVMEVNHGKPIE-----DVMFLPSGGLIA-TAG--GN--SVKIWD 249 (532)
Q Consensus 191 ~~~l~s~s~----dg~i~iwd~~~~~-------~~~~~~~~~~~~v~-----~i~~~~~~~~l~-~~~--d~--~i~iwd 249 (532)
++.++.... +..|.+||+.+++ ........+...|. ...|+|||+.++ ..+ +| .|.+||
T Consensus 271 g~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~ 350 (740)
T 4a5s_A 271 ERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQ 350 (740)
T ss_dssp TEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEE
T ss_pred CeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEE
Confidence 886665433 3479999999876 12222234554444 788999999766 554 44 688888
Q ss_pred ccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEec----C--CeEEEEECCCceEEEeeec-----CCCee
Q 038802 250 LIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVAL----D--GYMKVFDYGKMKVTHSMRF-----PAPLM 318 (532)
Q Consensus 250 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~----d--g~i~iwd~~~~~~~~~~~~-----~~~v~ 318 (532)
+.++ .. ..+......+..+.. +++ +..+++++. . ..|+..++..+.....+.. ...+.
T Consensus 351 ~~~~-~~-~~lT~g~~~v~~~~~-~d~--------~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~ 419 (740)
T 4a5s_A 351 IDKK-DC-TFITKGTWEVIGIEA-LTS--------DYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYY 419 (740)
T ss_dssp TTCS-SC-EESCCSSSCEEEEEE-ECS--------SEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBE
T ss_pred CCCC-ce-EecccCCEEEEEEEE-EeC--------CEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceE
Confidence 8754 33 344444555655542 443 455555554 2 3455556665554323331 25788
Q ss_pred EEEEecCCCEEEEEecC---CcEEEEeecCcc
Q 038802 319 SVAFSPDCMTRVIGTSN---GTIFAGRRKKKE 347 (532)
Q Consensus 319 ~~~~s~~~~~l~~g~~d---g~i~iw~~~~~~ 347 (532)
...|+|+|++++..... ..+.+++..+++
T Consensus 420 ~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~ 451 (740)
T 4a5s_A 420 SVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDK 451 (740)
T ss_dssp EEEECTTSSEEEEEECSBSSCEEEEEETTTTE
T ss_pred EEEECCCCCEEEEEeCCCCCCEEEEEECCCCc
Confidence 99999999987765543 357777766543
No 178
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.77 E-value=1.2e-15 Score=155.11 Aligned_cols=273 Identities=14% Similarity=0.077 Sum_probs=203.8
Q ss_pred CCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECC--CCceEEEecCCCCCE
Q 038802 61 PTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVK--SRTPLRRLKSHTRPV 138 (532)
Q Consensus 61 p~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~~~h~~~i 138 (532)
|.+..+++...++.|.++|..+++.+..+... ..+..+.|+|||+++++++.|+.|.+||+. +++.+..+.... ..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EA 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CC
Confidence 33445555566899999999999998888653 356789999999999999999999999995 778888777543 35
Q ss_pred EEEEee----cCCCcEEEEEe-CCCeEEEEECCCCeEEEeccC----------CCC-ceEEEEEeCCCCCEEEEEeCCCe
Q 038802 139 RFVKYP----FLDKLHLVSGG-DDGIVKFWDVAGESVVLDLFG----------HKD-YVRCGDCSPVNGDMFVTGSYDHT 202 (532)
Q Consensus 139 ~~~~~~----~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~----------~~~-~v~~i~~~~~~~~~l~s~s~dg~ 202 (532)
..++|+ | +++++++++ .+++|.++|..+.+.+..+.. |.. .+..+..++....+++....+|.
T Consensus 243 ~~ia~s~~~~p-DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 243 RSIETSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred ceeEEccccCC-CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 789999 6 777766655 569999999999988877642 112 57778888844556666677899
Q ss_pred EEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCeeeEEccC-----CCcceEEEEEecc
Q 038802 203 VKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKMVYSMES-----HNKTVTSVCVGRV 275 (532)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~-----~~~~i~~~~~~~~ 275 (532)
|.++|...........+........+.|+|+|++++++. ++.|.++|+.++ +.+..+.. |.+.-..+ ++|+
T Consensus 322 v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~-kl~~~i~vgg~~Phpg~g~~~-~~p~ 399 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG-KLVAIEDTGGQTPHPGRGANF-VHPT 399 (567)
T ss_dssp EEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT-EEEEEEECSSSSBCCTTCEEE-EETT
T ss_pred EEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCC-cEEEEEeccCcCCCCccceee-ECCC
Confidence 999999876555555556667788899999999887665 689999999887 55554432 33222222 5666
Q ss_pred CCCCCccccccEEEEEe-cCCeEEEEECCC-------ceEEEeeecCC-CeeEEEEecCCCEEEEEec-------CCcEE
Q 038802 276 GNESGEEAMQYRILSVA-LDGYMKVFDYGK-------MKVTHSMRFPA-PLMSVAFSPDCMTRVIGTS-------NGTIF 339 (532)
Q Consensus 276 ~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~-------~~~~~~~~~~~-~v~~~~~s~~~~~l~~g~~-------dg~i~ 339 (532)
+ +...+++. .++.|.++|..+ ++.+.++...+ .-..+..+|+++++.+... .+.|.
T Consensus 400 ~--------g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~ 471 (567)
T 1qks_A 400 F--------GPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVA 471 (567)
T ss_dssp T--------EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEE
T ss_pred C--------CcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEE
Confidence 3 44445543 468999999988 78888887543 3355788999999998763 45899
Q ss_pred EEeecCc
Q 038802 340 AGRRKKK 346 (532)
Q Consensus 340 iw~~~~~ 346 (532)
++|..+.
T Consensus 472 v~d~~~~ 478 (567)
T 1qks_A 472 VFDIKAM 478 (567)
T ss_dssp EEEGGGC
T ss_pred EEECCcc
Confidence 9999876
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.76 E-value=8.9e-17 Score=169.26 Aligned_cols=300 Identities=10% Similarity=-0.005 Sum_probs=192.1
Q ss_pred CCCcccccccC---CCccCccccCee---------EEEEc--CCCCe-EEEEEe-CCeEEEEeCC--C-ceEEEEeec--
Q 038802 33 TPESKYWSSFK---PHQIPGLVSSIN---------SIVFS--PTTSH-LFAATH-SASLTLFSSQ--T-LEKHSAISS-- 91 (532)
Q Consensus 33 ~~~~~~w~~~~---~~~~~~h~~~V~---------~i~~s--p~~~~-l~~~~~-d~~v~i~~~~--~-~~~~~~~~~-- 91 (532)
.+...+|.... ..++..|...+. ...|+ |||+. |+.++. +..|++++.. . +. ...+..
T Consensus 46 ~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~ 124 (662)
T 3azo_A 46 AGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVS 124 (662)
T ss_dssp TTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCC
T ss_pred CCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCc
Confidence 44567887422 234566666666 56565 99998 776543 4677777765 2 33 444554
Q ss_pred ---cCceeEEEEEccCCCEEEEEcCC----------CCEEEEECCC------CceEEEec-CCCCCEEEEEeecCCCcEE
Q 038802 92 ---FKDVVTCSSFRPDGSLLAASDLS----------GLIQVFDVKS------RTPLRRLK-SHTRPVRFVKYPFLDKLHL 151 (532)
Q Consensus 92 ---~~~~v~~~~~~~~~~~l~~g~~d----------g~i~iwd~~~------~~~~~~~~-~h~~~i~~~~~~~~~~~~l 151 (532)
|...+.+++|+|||+.|++++.+ ..|++||+.+ +.. ..+. .+...+..++|+| +++.|
T Consensus 125 ~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~Sp-DG~~l 202 (662)
T 3azo_A 125 AVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSP-DGRQA 202 (662)
T ss_dssp CSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECT-TSSEE
T ss_pred cCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECC-CCCEE
Confidence 66788999999999999988766 5899999987 544 4555 5667788899999 99988
Q ss_pred EEEeCC--------CeEEEEECC-CC---eEEEeccCCCCceEEEEEeCCCCCEEEEEeCCC--eEEEEEcccCCceeEE
Q 038802 152 VSGGDD--------GIVKFWDVA-GE---SVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDH--TVKLWDVRVENSKSVM 217 (532)
Q Consensus 152 ~s~s~d--------g~i~iwd~~-~~---~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~ 217 (532)
+.++.+ ..|++||+. ++ +......+|...+..+.|+| +++++++++.++ .|.+||+.+++.....
T Consensus 203 a~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~ 281 (662)
T 3azo_A 203 VWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPATGAATQLC 281 (662)
T ss_dssp EEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTTCCEEESS
T ss_pred EEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCCCceeecc
Confidence 887754 479999998 56 44444455678899999999 888888888888 5666666554332221
Q ss_pred EecCCCc--------EEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEE
Q 038802 218 EVNHGKP--------IEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRIL 289 (532)
Q Consensus 218 ~~~~~~~--------v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~ 289 (532)
. .+... +.+++|+|++.+++++..+.+++|.+.........+..|...+..+. ++++. ..+++
T Consensus 282 ~-~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~-s~~~~-------~~~~~ 352 (662)
T 3azo_A 282 R-REEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGPWTEWAATL-TVSGT-------RAVGV 352 (662)
T ss_dssp C-CSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCSSCCEEEEEE-EEETT-------EEEEE
T ss_pred c-ccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecCCCCeEEEEE-ecCCC-------EEEEE
Confidence 1 11111 56789999999888887677788844322223677777877777662 44431 33444
Q ss_pred EEecCC--eEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEeecC
Q 038802 290 SVALDG--YMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKK 345 (532)
Q Consensus 290 s~~~dg--~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~ 345 (532)
+++.+. .|.+||+.+++...... +...+....+.+.....+.+..+..|..|-...
T Consensus 353 ~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~P 411 (662)
T 3azo_A 353 AASPRTAYEVVELDTVTGRARTIGARHTDPVDPAYYPEPQIRTFTAPDGREIHAHIYPP 411 (662)
T ss_dssp EEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGGSCCCEEEEEECTTSCEEEEEEECC
T ss_pred EcCCCCCCEEEEEECCCCceEEeecCCcccCCccccCcceEEEEEcCCCCEEEEEEECC
Confidence 445443 56666777777654433 222233333333333333332333566665543
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.75 E-value=1.5e-15 Score=161.03 Aligned_cols=274 Identities=11% Similarity=0.065 Sum_probs=188.7
Q ss_pred CCCCeEEEEEeCC-----eEEEEeCCCceEEEEee------ccCceeEEEEEccCCCEEEEEcCCC-----CEEEEECCC
Q 038802 61 PTTSHLFAATHSA-----SLTLFSSQTLEKHSAIS------SFKDVVTCSSFRPDGSLLAASDLSG-----LIQVFDVKS 124 (532)
Q Consensus 61 p~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~g~~dg-----~i~iwd~~~ 124 (532)
|+|++++....++ .+.+.+...+.....+. +|...+..++|||||++||.+..++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 8899888766542 45555555444332221 2334688999999999999765433 899999999
Q ss_pred CceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCe----------------EEEEECCCCe----EEEeccCCCCceEEE
Q 038802 125 RTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGI----------------VKFWDVAGES----VVLDLFGHKDYVRCG 184 (532)
Q Consensus 125 ~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~----------------i~iwd~~~~~----~~~~~~~~~~~v~~i 184 (532)
++.......+ ..+..++|+| +++.|+.++.++. |++|++.+++ .+.....|...+..+
T Consensus 161 g~~~~~~~~~-~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~ 238 (710)
T 2xdw_A 161 AKELPDVLER-VKFSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGA 238 (710)
T ss_dssp TEEEEEEEEE-ECSCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred CCCCcccccC-cccceEEEEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEE
Confidence 8876543222 2256789999 8888998888766 9999998765 333333456668899
Q ss_pred EEeCCCCCEEEEEeC-----CCeEEEEEccc------CCceeEEEecCCCcEEEEEEecCCCEEEEEc--C---CeEEEE
Q 038802 185 DCSPVNGDMFVTGSY-----DHTVKLWDVRV------ENSKSVMEVNHGKPIEDVMFLPSGGLIATAG--G---NSVKIW 248 (532)
Q Consensus 185 ~~~~~~~~~l~s~s~-----dg~i~iwd~~~------~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d---~~i~iw 248 (532)
.|+| ++++|+.++. +..|.+||+.+ +.........+...+.. .|+|+|..++..+ + ..|.+|
T Consensus 239 ~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~ 316 (710)
T 2xdw_A 239 ELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINI 316 (710)
T ss_dssp EECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEE
T ss_pred EEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEE
Confidence 9999 9998887765 56899999986 43222222244444544 4888888766554 2 369999
Q ss_pred EccCCCe-eeEEccCCCc--ceEEEEEeccCCCCCccccccEEEEEecCCe--EEEEECCCceEEEeee-cCCCeeEEEE
Q 038802 249 DLIGGGK-MVYSMESHNK--TVTSVCVGRVGNESGEEAMQYRILSVALDGY--MKVFDYGKMKVTHSMR-FPAPLMSVAF 322 (532)
Q Consensus 249 d~~~~~~-~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~-~~~~v~~~~~ 322 (532)
|+.++.. ....+..|.. .+..+.|+++ +.++++...|+. |.+||+.+++....+. +.+.+..+++
T Consensus 317 d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---------~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~ 387 (710)
T 2xdw_A 317 DFTDPEESKWKVLVPEHEKDVLEWVACVRS---------NFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSG 387 (710)
T ss_dssp ETTSCCGGGCEEEECCCSSCEEEEEEEETT---------TEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEEC
T ss_pred eCCCCCcccceeccCCCCCCeEEEEEEEcC---------CEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEec
Confidence 9876531 1233444433 6888898865 578888888885 6667876777666665 4567888999
Q ss_pred ecCCCEEEEEe----cCCcEEEEeecCcc
Q 038802 323 SPDCMTRVIGT----SNGTIFAGRRKKKE 347 (532)
Q Consensus 323 s~~~~~l~~g~----~dg~i~iw~~~~~~ 347 (532)
+|++..++... ..+.|+.|++.+++
T Consensus 388 s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 388 QKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp CTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 99997766442 34789999998765
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.75 E-value=6.1e-17 Score=159.04 Aligned_cols=256 Identities=11% Similarity=0.023 Sum_probs=175.5
Q ss_pred EEEeCCCceEEEEeeccCce-----eEEEEEccCCCEEEEEcCC---CCEEEEECCCCceEEEecCCCCCEEEEEeecCC
Q 038802 76 TLFSSQTLEKHSAISSFKDV-----VTCSSFRPDGSLLAASDLS---GLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLD 147 (532)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~ 147 (532)
...|..++.....+..+... +.+++|+|||++|+.+... ..|.+||+.+++......++......+.|+| +
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~sp-d 91 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIST-D 91 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECT-T
T ss_pred eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECC-C
Confidence 44577788777777655433 6778999999998876433 3688889988775544333332233477999 9
Q ss_pred CcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEE-------------------EEEeCCCCCEEEEE-----eCCCeE
Q 038802 148 KLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRC-------------------GDCSPVNGDMFVTG-----SYDHTV 203 (532)
Q Consensus 148 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~-------------------i~~~~~~~~~l~s~-----s~dg~i 203 (532)
++.|+.++.++.|++||+.+++.......+...... +.++| +++.++.+ ..+..|
T Consensus 92 g~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l 170 (396)
T 3c5m_A 92 ERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRL 170 (396)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEE
T ss_pred CCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceE
Confidence 999999999999999999988766555544443322 34566 66655543 356789
Q ss_pred EEEEcccCCceeEEEecCCCcEEEEEEec-CCCEEEEEc-C------CeEEEEEccCCCeeeEEccCC--CcceEEEEEe
Q 038802 204 KLWDVRVENSKSVMEVNHGKPIEDVMFLP-SGGLIATAG-G------NSVKIWDLIGGGKMVYSMESH--NKTVTSVCVG 273 (532)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~-d------~~i~iwd~~~~~~~~~~~~~~--~~~i~~~~~~ 273 (532)
.+||+.+++..... .+...+..+.|+| ++..++..+ + ..|.+||+..+ . ...+..+ ...+..+.|+
T Consensus 171 ~~~d~~~g~~~~~~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~-~~~l~~~~~~~~~~~~~~s 246 (396)
T 3c5m_A 171 IKVDIETGELEVIH--QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS-N-VRKIKEHAEGESCTHEFWI 246 (396)
T ss_dssp EEEETTTCCEEEEE--EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC-C-CEESSCCCTTEEEEEEEEC
T ss_pred EEEECCCCcEEeec--cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC-c-eeEeeccCCCccccceEEC
Confidence 99999876544333 4567789999999 787666554 2 36888887654 3 2333333 3368889999
Q ss_pred ccCCCCCccccccEEEEEecC-----CeEEEEECCCceEEEeeecCCCeeEEEEec-CCCEEEEEe--------------
Q 038802 274 RVGNESGEEAMQYRILSVALD-----GYMKVFDYGKMKVTHSMRFPAPLMSVAFSP-DCMTRVIGT-------------- 333 (532)
Q Consensus 274 ~~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~g~-------------- 333 (532)
|+ +.+|+.++.+ +.|++||+.+++.......+. .. +.|+| ||+++++++
T Consensus 247 pd---------g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~ 315 (396)
T 3c5m_A 247 PD---------GSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYN 315 (396)
T ss_dssp TT---------SSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------C
T ss_pred CC---------CCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccc
Confidence 99 4555555443 459999999887654443332 33 89999 999888765
Q ss_pred --cCCcEEEEeecCccc
Q 038802 334 --SNGTIFAGRRKKKEN 348 (532)
Q Consensus 334 --~dg~i~iw~~~~~~~ 348 (532)
.++.|++|+..+++.
T Consensus 316 ~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 316 IENDPFLYVLNTKAKSA 332 (396)
T ss_dssp CCCCCEEEEEETTTTBC
T ss_pred cCCCCcEEEEecccCce
Confidence 346799999877653
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.74 E-value=8.6e-15 Score=148.87 Aligned_cols=305 Identities=11% Similarity=0.055 Sum_probs=212.0
Q ss_pred CCCcccccccCCCcc--CccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCC--CceEEEEeeccCceeEEEEEc----cC
Q 038802 33 TPESKYWSSFKPHQI--PGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQ--TLEKHSAISSFKDVVTCSSFR----PD 104 (532)
Q Consensus 33 ~~~~~~w~~~~~~~~--~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~--~~~~~~~~~~~~~~v~~~~~~----~~ 104 (532)
+..+.+++.-....+ ......+..+.|+|||+++++++.++.|.+||+. +++.+..+.... ....++|+ ||
T Consensus 176 ~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pD 254 (567)
T 1qks_A 176 AGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWE 254 (567)
T ss_dssp TTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCT
T ss_pred CCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCC
Confidence 345566664433222 1233356799999999999999999999999995 788888776643 46789999 69
Q ss_pred CCEEEEEcC-CCCEEEEECCCCceEEEecCC-----------CCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEE
Q 038802 105 GSLLAASDL-SGLIQVFDVKSRTPLRRLKSH-----------TRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVL 172 (532)
Q Consensus 105 ~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~h-----------~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 172 (532)
|+++++++. +++|.++|..+.+.+..+... ...+..+..++.....+++...+|.|.++|..+.+...
T Consensus 255 Gk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~ 334 (567)
T 1qks_A 255 DKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK 334 (567)
T ss_dssp TTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEE
T ss_pred CCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccce
Confidence 999887765 589999999999888776521 12678888888455666667778999999987654222
Q ss_pred ec-cCCCCceEEEEEeCCCCCEEEEEe-CCCeEEEEEcccCCceeEEEe----cCCCcEEEEEEecC-CCEEEEEc--CC
Q 038802 173 DL-FGHKDYVRCGDCSPVNGDMFVTGS-YDHTVKLWDVRVENSKSVMEV----NHGKPIEDVMFLPS-GGLIATAG--GN 243 (532)
Q Consensus 173 ~~-~~~~~~v~~i~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~----~~~~~v~~i~~~~~-~~~l~~~~--d~ 243 (532)
.. ........++.|+| ++++++++. .+++|.++|+.+++....... .|.+.-..+ ++|+ +...+++. ++
T Consensus 335 v~~i~~~~~~~d~~~~p-dgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~ 412 (567)
T 1qks_A 335 TTEISAERFLHDGGLDG-SHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDD 412 (567)
T ss_dssp EEEEECCSSEEEEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSS
T ss_pred eeeeeccccccCceECC-CCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCC
Confidence 11 12344567889999 888776655 578999999998765555544 233222222 5787 44555554 58
Q ss_pred eEEEEEccCC------CeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEec-------CCeEEEEECCCc-----
Q 038802 244 SVKIWDLIGG------GKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVAL-------DGYMKVFDYGKM----- 305 (532)
Q Consensus 244 ~i~iwd~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~----- 305 (532)
.|.++|..+. .+.+.++......-..+..+|+ +.++++... .+.|.++|+.+.
T Consensus 413 ~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~---------~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~ 483 (567)
T 1qks_A 413 SVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPN---------SQYLYVDATLNPEAEISGSVAVFDIKAMTGDGS 483 (567)
T ss_dssp EEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT---------CSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSS
T ss_pred eEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCC---------CCeEEEecCCCCCcccCceEEEEECCccccccc
Confidence 9999998762 2556666554333345677888 556666552 469999999877
Q ss_pred e-EEEeee---------cCCCeeEEEEecCCCEEEEEec-----CCcEEEEeecCcccc
Q 038802 306 K-VTHSMR---------FPAPLMSVAFSPDCMTRVIGTS-----NGTIFAGRRKKKENV 349 (532)
Q Consensus 306 ~-~~~~~~---------~~~~v~~~~~s~~~~~l~~g~~-----dg~i~iw~~~~~~~~ 349 (532)
. ....+. ....+..+.|+|+|+.+..+.. ++.|.|+|.++.+..
T Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~ 542 (567)
T 1qks_A 484 DPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELK 542 (567)
T ss_dssp CCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEE
T ss_pred CCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEE
Confidence 2 112221 2357899999999998877643 789999999887654
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.74 E-value=2e-15 Score=142.05 Aligned_cols=240 Identities=11% Similarity=0.027 Sum_probs=170.7
Q ss_pred EEEEeeccCceeEEEEEccCCC-EEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEE
Q 038802 85 KHSAISSFKDVVTCSSFRPDGS-LLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFW 163 (532)
Q Consensus 85 ~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iw 163 (532)
....+..+.....+++|+|+|+ +++++..++.|..||..++ ...+..+...+.++++++ ++.++++...++.|.+|
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQ 95 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEE
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEE
Confidence 3344445556778999999998 7888888999999999877 666777788899999999 88877777677899999
Q ss_pred ECCCCeEEEeccCC----CCceEEEEEeCCCCCEEEE----EeC-------------CCeEEEEEcccCCceeEEEecCC
Q 038802 164 DVAGESVVLDLFGH----KDYVRCGDCSPVNGDMFVT----GSY-------------DHTVKLWDVRVENSKSVMEVNHG 222 (532)
Q Consensus 164 d~~~~~~~~~~~~~----~~~v~~i~~~~~~~~~l~s----~s~-------------dg~i~iwd~~~~~~~~~~~~~~~ 222 (532)
|..+++........ ...+..++++| +++++++ |+. .+.|..+|.. + .... ...+.
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-~~~~-~~~~~ 171 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G-TLSA-PIRDR 171 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-CEEE-EECCC
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-C-CEEE-eecCC
Confidence 99877754433211 23456799999 8998887 331 2455555544 2 2222 23455
Q ss_pred CcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCee---eEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEE
Q 038802 223 KPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKM---VYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMK 298 (532)
Q Consensus 223 ~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~ 298 (532)
.....++|+|+++.+++.+ ++.|.+||+...+.. ...+..+...+.+++++++ +.++++. ++.|.
T Consensus 172 ~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~---------G~l~v~~--~~~v~ 240 (296)
T 3e5z_A 172 VKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAG---------GLIWASA--GDGVH 240 (296)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTT---------SCEEEEE--TTEEE
T ss_pred CCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCC---------CCEEEEc--CCeEE
Confidence 6778999999999886666 689999998732233 2222334556678999988 4444444 88999
Q ss_pred EEECCCceEEEeeecCCCeeEEEE-ecCCCEEEEEecCCcEEEEeec
Q 038802 299 VFDYGKMKVTHSMRFPAPLMSVAF-SPDCMTRVIGTSNGTIFAGRRK 344 (532)
Q Consensus 299 iwd~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~g~~dg~i~iw~~~ 344 (532)
+||.. ++.+..+..+..+.+++| +|+++.|++++.+| +.-++.+
T Consensus 241 ~~~~~-g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~-l~~~~~~ 285 (296)
T 3e5z_A 241 VLTPD-GDELGRVLTPQTTSNLCFGGPEGRTLYMTVSTE-FWSIETN 285 (296)
T ss_dssp EECTT-SCEEEEEECSSCCCEEEEESTTSCEEEEEETTE-EEEEECS
T ss_pred EECCC-CCEEEEEECCCCceeEEEECCCCCEEEEEcCCe-EEEEEcc
Confidence 99986 777777774444999999 58999999888764 3333443
No 184
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.74 E-value=2.5e-14 Score=138.39 Aligned_cols=274 Identities=8% Similarity=-0.033 Sum_probs=190.4
Q ss_pred EcCCCCeEEEEEe--CC---eEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEc----------CCCCEEEEECC
Q 038802 59 FSPTTSHLFAATH--SA---SLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASD----------LSGLIQVFDVK 123 (532)
Q Consensus 59 ~sp~~~~l~~~~~--d~---~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~----------~dg~i~iwd~~ 123 (532)
..|++++++++.. .+ .|.+||..+++.+..+.....+ .++++|||++++++. .++.|.+||..
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 3466766666543 22 8899999999988887764444 999999999999885 36789999999
Q ss_pred CCceEEEecCC-------CCCEEEEEeecCCCcEEEEEeC--CCeEEEEECCCCeEEEe-ccCCCCceEEEEEeCCCCCE
Q 038802 124 SRTPLRRLKSH-------TRPVRFVKYPFLDKLHLVSGGD--DGIVKFWDVAGESVVLD-LFGHKDYVRCGDCSPVNGDM 193 (532)
Q Consensus 124 ~~~~~~~~~~h-------~~~i~~~~~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~i~~~~~~~~~ 193 (532)
+.+.+..+... ......+.|+| ++++|++++. ++.|.++| .+++.+.. +... . ++.+.|.....
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~ 179 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPST 179 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCce
Confidence 88877766432 12345789999 8888888774 57899999 99988877 5432 2 24455634567
Q ss_pred EEEEeCCCeEEEEEcccCCceeEEEe----cCCCcE-EEEEEecCCCE-EEEEcCCeEEEEEccCCC-eeeEEccC----
Q 038802 194 FVTGSYDHTVKLWDVRVENSKSVMEV----NHGKPI-EDVMFLPSGGL-IATAGGNSVKIWDLIGGG-KMVYSMES---- 262 (532)
Q Consensus 194 l~s~s~dg~i~iwd~~~~~~~~~~~~----~~~~~v-~~i~~~~~~~~-l~~~~d~~i~iwd~~~~~-~~~~~~~~---- 262 (532)
+++.+.||.+.++|. +++....... ....++ ....+.+++.. ++...++.+.+.|+.... ..+..+..
T Consensus 180 ~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~ 258 (373)
T 2mad_H 180 FYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGG 258 (373)
T ss_pred EEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCc
Confidence 777888999999999 6554422210 112222 23456665543 444457899999986542 12222211
Q ss_pred ------CCcceEEEEEeccCCCCCccccccEEEEEec----------CCeEEEEECCCceEEEeeecCCCeeEEEEecCC
Q 038802 263 ------HNKTVTSVCVGRVGNESGEEAMQYRILSVAL----------DGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDC 326 (532)
Q Consensus 263 ------~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~ 326 (532)
.......+.+++++ ..++.+.. ++.|.++|..+++.+..+.......+++|+|||
T Consensus 259 ~~~~~~~p~g~~~~~~s~d~---------~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg 329 (373)
T 2mad_H 259 RKADTWRPGGWQQVAYLKSS---------DGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDG 329 (373)
T ss_pred ccccceecCceEeEEECCCC---------CEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCC
Confidence 01223346778774 44554432 468999999999999999887789999999999
Q ss_pred C-EEEEEe-cCCcEEEEeecCccccc
Q 038802 327 M-TRVIGT-SNGTIFAGRRKKKENVE 350 (532)
Q Consensus 327 ~-~l~~g~-~dg~i~iw~~~~~~~~~ 350 (532)
+ .++++. .++.|.++|..+.+...
T Consensus 330 ~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 330 GPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred CeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 9 777777 58999999999887653
No 185
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.73 E-value=1.7e-15 Score=144.53 Aligned_cols=277 Identities=14% Similarity=0.103 Sum_probs=197.6
Q ss_pred EEEcCCCCeEEEEEe-----CCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEc----------CCCCEEEEE
Q 038802 57 IVFSPTTSHLFAATH-----SASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASD----------LSGLIQVFD 121 (532)
Q Consensus 57 i~~sp~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~----------~dg~i~iwd 121 (532)
....|+++.+++... ++.|.++|..+++.+..+.....+ . ++++|||+++++++ .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 455789998888876 579999999999999998765665 4 99999999988775 367899999
Q ss_pred CCCCceEEEecCCC-------CCEEEEEeecCCCcEEEEEeC--CCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCC
Q 038802 122 VKSRTPLRRLKSHT-------RPVRFVKYPFLDKLHLVSGGD--DGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGD 192 (532)
Q Consensus 122 ~~~~~~~~~~~~h~-------~~i~~~~~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 192 (532)
..+++.+..+.... .....+.|+| ++++++++.. ++.|.++|+.+++.+.++.... |..+.|....
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g----~~~~~P~g~~ 190 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD----CYHIFPTAPD 190 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETT
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC----cceeecCCCc
Confidence 99999888775321 2355789999 8888888764 6899999999999988885322 1223343566
Q ss_pred EEEEEeCCCeEEEEEccc-CCceeEEE--e-cCCCcEE-EEEEe-cCCCEEEEEcCCeEEEEEccCCC-eeeEEcc----
Q 038802 193 MFVTGSYDHTVKLWDVRV-ENSKSVME--V-NHGKPIE-DVMFL-PSGGLIATAGGNSVKIWDLIGGG-KMVYSME---- 261 (532)
Q Consensus 193 ~l~s~s~dg~i~iwd~~~-~~~~~~~~--~-~~~~~v~-~i~~~-~~~~~l~~~~d~~i~iwd~~~~~-~~~~~~~---- 261 (532)
.+++.+.||++.+.++.. ++...... + ....++. ...|. ++|++++.+.+|.|.+.|+.+.. .....+.
T Consensus 191 ~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~ 270 (386)
T 3sjl_D 191 TFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTE 270 (386)
T ss_dssp EEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCH
T ss_pred eeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceecccc
Confidence 777888899999999876 33321111 0 0112222 24554 68877776668999999987552 1222111
Q ss_pred -----C-CCcceEEEEEeccCCCCCccccccEEEEEec----------CCeEEEEECCCceEEEeeecCCCeeEEEEecC
Q 038802 262 -----S-HNKTVTSVCVGRVGNESGEEAMQYRILSVAL----------DGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPD 325 (532)
Q Consensus 262 -----~-~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~ 325 (532)
+ .......+.+++++ ..++.... .+.|.++|+.+++.+..+....+++++++++|
T Consensus 271 ~~~~~g~~p~g~q~~a~~~~~---------~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D 341 (386)
T 3sjl_D 271 AERADGWRPGGWQQVAYHRAL---------DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQD 341 (386)
T ss_dssp HHHHTTEEECSSSCEEEETTT---------TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSS
T ss_pred ccccccccCCCcceeeECCCC---------CeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCC
Confidence 0 01123346667774 44444332 25799999999999999998788999999999
Q ss_pred CC-EEEEE-ecCCcEEEEeecCcccc
Q 038802 326 CM-TRVIG-TSNGTIFAGRRKKKENV 349 (532)
Q Consensus 326 ~~-~l~~g-~~dg~i~iw~~~~~~~~ 349 (532)
++ .|+++ ..+|.|.++|..+.+..
T Consensus 342 ~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 342 EKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp SSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 97 66665 45899999999988655
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=2.9e-15 Score=158.82 Aligned_cols=244 Identities=9% Similarity=0.030 Sum_probs=174.5
Q ss_pred ccccCeeEEEEcCCCCeEEEEEeCC-----eEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCC-------
Q 038802 49 GLVSSINSIVFSPTTSHLFAATHSA-----SLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGL------- 116 (532)
Q Consensus 49 ~h~~~V~~i~~sp~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~------- 116 (532)
+|...+.+++|||||++|+.++.++ .|++||+.+++.......+ ..+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3555789999999999998877643 8999999998876543222 23678999999999999887766
Q ss_pred ---------EEEEECCCCce--EEEe--cCCCCCEEEEEeecCCCcEEEEEeC-----CCeEEEEECCC------Ce-EE
Q 038802 117 ---------IQVFDVKSRTP--LRRL--KSHTRPVRFVKYPFLDKLHLVSGGD-----DGIVKFWDVAG------ES-VV 171 (532)
Q Consensus 117 ---------i~iwd~~~~~~--~~~~--~~h~~~i~~~~~~~~~~~~l~s~s~-----dg~i~iwd~~~------~~-~~ 171 (532)
|++|++.+++. ...+ ..|...+..+.|+| ++++|+.++. +..|++||+.+ +. ..
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 279 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW 279 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence 99999988752 2222 33566688999999 8888877764 57899999976 42 34
Q ss_pred EeccCCCCceEEEEEeCCCCCEEEEEeCC----CeEEEEEcccCCc--eeEEEecCC--CcEEEEEEecCCCEEEEEc-C
Q 038802 172 LDLFGHKDYVRCGDCSPVNGDMFVTGSYD----HTVKLWDVRVENS--KSVMEVNHG--KPIEDVMFLPSGGLIATAG-G 242 (532)
Q Consensus 172 ~~~~~~~~~v~~i~~~~~~~~~l~s~s~d----g~i~iwd~~~~~~--~~~~~~~~~--~~v~~i~~~~~~~~l~~~~-d 242 (532)
..+..+...+.. .|+| +++.|+..+.+ +.|.+||+.++.. ...+. .+. ..+.+++|++++.++++.. +
T Consensus 280 ~~l~~~~~~~~~-~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 280 VKLIDNFEGEYD-YVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV-PEHEKDVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp EEEECSSSSCEE-EEEE-ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE-CCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred EEeeCCCCcEEE-EEec-cCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc-CCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence 455556666654 4777 77776665553 3699999987542 12222 333 3688899997777887777 6
Q ss_pred C--eEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEec---CCeEEEEECCCce
Q 038802 243 N--SVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVAL---DGYMKVFDYGKMK 306 (532)
Q Consensus 243 ~--~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~ 306 (532)
+ .|.+||+.++ .....+..+.+.+..+.++|++ ..++++.+. .+.|+.||+.+++
T Consensus 357 g~~~l~~~~~~~g-~~~~~l~~~~~~v~~~~~s~d~--------~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 357 VKNTLQLHDLATG-ALLKIFPLEVGSVVGYSGQKKD--------TEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TEEEEEEEETTTC-CEEEEECCCSSEEEEEECCTTC--------SEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CEEEEEEEECCCC-CEEEecCCCCceEEEEecCCCC--------CEEEEEEeCCCCCCEEEEEECCCCc
Confidence 6 4667776555 5566677777888899998874 334444333 4789999998876
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=1.5e-15 Score=142.92 Aligned_cols=240 Identities=11% Similarity=0.033 Sum_probs=175.8
Q ss_pred CccccCeeEEEEcCCCC-eEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCc
Q 038802 48 PGLVSSINSIVFSPTTS-HLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRT 126 (532)
Q Consensus 48 ~~h~~~V~~i~~sp~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~ 126 (532)
..+.....+++|+|+++ .++++..++.|..||..++ ...+..+...+.+++++++|+++++...++.|.+||..+++
T Consensus 24 ~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 24 ADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred ecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 34555678999999998 6777778899999999877 56666677889999999999988887777899999998777
Q ss_pred eEEEecCC----CCCEEEEEeecCCCcEEEEE----e-------------CCCeEEEEECCCCeEEEeccCCCCceEEEE
Q 038802 127 PLRRLKSH----TRPVRFVKYPFLDKLHLVSG----G-------------DDGIVKFWDVAGESVVLDLFGHKDYVRCGD 185 (532)
Q Consensus 127 ~~~~~~~h----~~~i~~~~~~~~~~~~l~s~----s-------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~ 185 (532)
........ ...+.+++++| ++.++++. + ..+.|..++.. ++. ..+..+......++
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~ 178 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLA 178 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEE
T ss_pred EEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCccEE
Confidence 54433221 23456799999 88877773 2 13466666665 443 34445666778999
Q ss_pred EeCCCCCEEEEEeCCCeEEEEEcc-cCCc---eeEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEcc
Q 038802 186 CSPVNGDMFVTGSYDHTVKLWDVR-VENS---KSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSME 261 (532)
Q Consensus 186 ~~~~~~~~l~s~s~dg~i~iwd~~-~~~~---~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~ 261 (532)
|+| +++.+++.+.++.|.+||+. .+.. ...+ ..+...+.+++++++|+++++. ++.|.+||.. + +.+..+.
T Consensus 179 ~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g-~~~~~~~ 253 (296)
T 3e5z_A 179 FLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-G-DELGRVL 253 (296)
T ss_dssp ECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-S-CEEEEEE
T ss_pred ECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-C-CEEEEEE
Confidence 999 88888888888999999987 3332 2222 2345566789999999988777 8899999975 3 5666776
Q ss_pred CCCcceEEEEEe-ccCCCCCccccccEEEEEecCCeEEEEECCCceEE
Q 038802 262 SHNKTVTSVCVG-RVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVT 308 (532)
Q Consensus 262 ~~~~~i~~~~~~-~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (532)
.+.. +++++|. ++ +..|++++.+ .+.-++..+..+.
T Consensus 254 ~~~~-~~~~~f~~~d---------~~~L~v~t~~-~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 254 TPQT-TSNLCFGGPE---------GRTLYMTVST-EFWSIETNVRGLE 290 (296)
T ss_dssp CSSC-CCEEEEESTT---------SCEEEEEETT-EEEEEECSCCBCC
T ss_pred CCCC-ceeEEEECCC---------CCEEEEEcCC-eEEEEEccccccc
Confidence 6766 8899995 56 5667777765 4556666665543
No 188
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.72 E-value=1.7e-13 Score=128.74 Aligned_cols=278 Identities=9% Similarity=0.001 Sum_probs=194.6
Q ss_pred cCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEE-EeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCC
Q 038802 47 IPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHS-AISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSR 125 (532)
Q Consensus 47 ~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 125 (532)
++.....+.++++.++|...++...++.|.+||.. ++... .+......+.++++.++|.+.++...++.|..||.. +
T Consensus 15 ~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 15 LSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 34456688999999999866655567999999987 55443 222334678999999999888877778889999987 5
Q ss_pred ceEE-EecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEE-eccCCCCceEEEEEeCCCCCEEEEEeCCCeE
Q 038802 126 TPLR-RLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVL-DLFGHKDYVRCGDCSPVNGDMFVTGSYDHTV 203 (532)
Q Consensus 126 ~~~~-~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i 203 (532)
+... ........+.++++.+ ++.++++...++.|..||.. ++... .+......+.++++.+ +++++++...++.|
T Consensus 93 ~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 93 GFTEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGS-DNALWFTENQNNSI 169 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEE
T ss_pred CeEEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECC-CCCEEEEecCCCeE
Confidence 5432 2223446789999998 78777777668899999987 55442 2333456788999998 88877777667889
Q ss_pred EEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCcc
Q 038802 204 KLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEE 282 (532)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 282 (532)
..||. ++.............+.+++++++|.+.++.. ++.|.+||. ++.........+...+.++++.++
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~------- 240 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKN------- 240 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECST-------
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCC-------
Confidence 99998 43333221113345688999999998887776 678999998 432333333444567889999988
Q ss_pred ccccEEEEEecCCeEEEEECCCceEEEe-ee-cCCCeeEEEEecCCCEEEEEecCCcEEEEee
Q 038802 283 AMQYRILSVALDGYMKVFDYGKMKVTHS-MR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRR 343 (532)
Q Consensus 283 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~ 343 (532)
+.+.++...++.|..||. +++.... .. ....+.+++++++|...++.. + .|..++.
T Consensus 241 --g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 241 --SEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp --TCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred --CCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 455555556789999998 4443321 22 235688999999998666544 4 6666654
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.71 E-value=8.5e-15 Score=139.76 Aligned_cols=255 Identities=9% Similarity=-0.005 Sum_probs=184.1
Q ss_pred cCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEe
Q 038802 52 SSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRL 131 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 131 (532)
.....+.+.. +...++...++.|.+||..+++.+.++.. ......++++++++..++...++.|.+||..+++....+
T Consensus 44 ~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 44 DVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp SCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred ccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEE
Confidence 3467787753 33444444578999999999999888854 466789999999855555547899999999999887776
Q ss_pred cCCC-----CCEEEEEeecCCCcEEEEEe-CCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCC-----
Q 038802 132 KSHT-----RPVRFVKYPFLDKLHLVSGG-DDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYD----- 200 (532)
Q Consensus 132 ~~h~-----~~i~~~~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~d----- 200 (532)
.... .....+++ . ++..+++.. .++.|.+||..+++.+..+.... ....+.++| ++++++++..+
T Consensus 122 ~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~-dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 122 ECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDK-YNKMWTITDGGYEGSP 197 (328)
T ss_dssp ECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECT-TSEEEEEBCCBCTTCS
T ss_pred EcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcC-CCCEEEEECCCccCCc
Confidence 5433 13456666 3 555555544 48999999999998887775433 346788998 88877776654
Q ss_pred -----CeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeE-E-ccCCCcceEEEEEe
Q 038802 201 -----HTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVY-S-MESHNKTVTSVCVG 273 (532)
Q Consensus 201 -----g~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~-~-~~~~~~~i~~~~~~ 273 (532)
+.|.++|..+.+...............++++|+++.+.++.. .|.+||..++ +... . +..+......++++
T Consensus 198 ~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~-~~~~~~~~~~~~~~p~gi~vd 275 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEAD-RVPVRPFLEFRDTKYYGLTVN 275 (328)
T ss_dssp SCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTCS-SCCSSCSBCCCSSCEEEEEEC
T ss_pred cccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCCC-ceeeeeeecCCCCceEEEEEc
Confidence 789999998765544444443457899999999998887765 8999998766 3221 1 12224568899999
Q ss_pred ccCCCCCccccccEEEEE----ecCCeEEEEECCCceEEEeeecCCCeeEEEEe
Q 038802 274 RVGNESGEEAMQYRILSV----ALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFS 323 (532)
Q Consensus 274 ~~~~~~~~~~~~~~l~s~----~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s 323 (532)
|++ +.++++. ..++.|.+||.. ++.+..+........++|-
T Consensus 276 p~~--------g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P~~~~~~ 320 (328)
T 3dsm_A 276 PNN--------GEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIPGAFCWK 320 (328)
T ss_dssp TTT--------CCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEESEEEEEEE
T ss_pred CCC--------CeEEEEcccccccCCEEEEECCC-CCEEEEEEeccCcceEEEe
Confidence 964 5566666 678999999998 8988888765556666663
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=2.7e-14 Score=136.76 Aligned_cols=241 Identities=10% Similarity=-0.019 Sum_probs=169.3
Q ss_pred CCCCCcccccccCCCccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEE
Q 038802 31 SQTPESKYWSSFKPHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAA 110 (532)
Q Consensus 31 ~~~~~~~~w~~~~~~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 110 (532)
..+...+.|.......+.++...+.+++|+|+++.+++++.++.|.+||..+++.......+...+.+++++|+|+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~ 103 (333)
T 2dg1_A 24 ISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVC 103 (333)
T ss_dssp CCGGGSCEEECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEE
T ss_pred eecccCcccccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEE
Confidence 34556677743333445667778899999999997777778899999999887766554456678999999999998887
Q ss_pred EcCC----CCEEEEECCCCceEEEec--CCCCCEEEEEeecCCCcEEEEEeC------CCeEEEEECCCCeEEEeccCCC
Q 038802 111 SDLS----GLIQVFDVKSRTPLRRLK--SHTRPVRFVKYPFLDKLHLVSGGD------DGIVKFWDVAGESVVLDLFGHK 178 (532)
Q Consensus 111 g~~d----g~i~iwd~~~~~~~~~~~--~h~~~i~~~~~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~ 178 (532)
+..+ +.|.+||..++.....+. .+...+.+++++| ++.++++... .+.|..+|..+++... +..+.
T Consensus 104 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~ 181 (333)
T 2dg1_A 104 YLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNI 181 (333)
T ss_dssp ECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEE
T ss_pred eCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCC
Confidence 7666 689999998776543333 3456789999999 7877766553 3667777776554433 22233
Q ss_pred CceEEEEEeCCCCCEE-EEEeCCCeEEEEEccc-CCceeEE------EecCCCcEEEEEEecCCCEEEEEc-CCeEEEEE
Q 038802 179 DYVRCGDCSPVNGDMF-VTGSYDHTVKLWDVRV-ENSKSVM------EVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWD 249 (532)
Q Consensus 179 ~~v~~i~~~~~~~~~l-~s~s~dg~i~iwd~~~-~~~~~~~------~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd 249 (532)
..+..++|+| +++.+ ++.+.++.|.+||+.+ +...... .......+..++++++|+++++.. ++.|.+||
T Consensus 182 ~~~~~i~~~~-dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 182 SVANGIALST-DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFN 260 (333)
T ss_dssp SSEEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred CcccceEECC-CCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEEC
Confidence 4578899999 88755 5555678999999964 2222111 111124678899999999877775 68999999
Q ss_pred ccCCCeeeEEccCCCc------ceEEEEEeccC
Q 038802 250 LIGGGKMVYSMESHNK------TVTSVCVGRVG 276 (532)
Q Consensus 250 ~~~~~~~~~~~~~~~~------~i~~~~~~~~~ 276 (532)
.. + ..+..+..+.. .+.+++|++++
T Consensus 261 ~~-g-~~~~~~~~~~~~~g~~~~~~~~~~~~dg 291 (333)
T 2dg1_A 261 KR-G-YPIGQILIPGRDEGHMLRSTHPQFIPGT 291 (333)
T ss_dssp TT-S-CEEEEEECTTGGGTCSCBCCEEEECTTS
T ss_pred CC-C-CEEEEEEcCCCccccccCcceEEECCCC
Confidence 74 3 44555544332 68899999873
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.70 E-value=2e-15 Score=159.55 Aligned_cols=272 Identities=12% Similarity=-0.010 Sum_probs=183.8
Q ss_pred cCCCCeEEEEEeCC-----eEEEEeCCCceEEEEee------ccCceeEEEEEccCCCEEEE-----EcCCCCEEEEECC
Q 038802 60 SPTTSHLFAATHSA-----SLTLFSSQTLEKHSAIS------SFKDVVTCSSFRPDGSLLAA-----SDLSGLIQVFDVK 123 (532)
Q Consensus 60 sp~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~-----g~~dg~i~iwd~~ 123 (532)
+|+|.+++....++ .+.+.+...+.....+. +|...+.+++|||||++||. |+.+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 47899888777643 34555554554333332 34457899999999999993 4445689999999
Q ss_pred CCceEEEecCCCCCE--EEEEeecCCCcEEEEEeCCCe-------------EEEEECCCCe----EEEeccCCCCceEEE
Q 038802 124 SRTPLRRLKSHTRPV--RFVKYPFLDKLHLVSGGDDGI-------------VKFWDVAGES----VVLDLFGHKDYVRCG 184 (532)
Q Consensus 124 ~~~~~~~~~~h~~~i--~~~~~~~~~~~~l~s~s~dg~-------------i~iwd~~~~~----~~~~~~~~~~~v~~i 184 (532)
+++.+. ..+...+ ..++|+| +++.|+.++.|.. |++|++.++. .+.....|...+.++
T Consensus 156 tg~~~~--~~~~~~~~~~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~ 232 (695)
T 2bkl_A 156 SGEWSK--VDVIEGGKYATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQS 232 (695)
T ss_dssp TCCBCS--SCCBSCCTTCCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEE
T ss_pred CCCCcC--CcccCcccccceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEE
Confidence 987641 1121222 6789999 8888999888776 9999998775 444444566788899
Q ss_pred EEeCCCCCEEEEEeCCC----eEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc----CCeEEEEEccCCCe-
Q 038802 185 DCSPVNGDMFVTGSYDH----TVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG----GNSVKIWDLIGGGK- 255 (532)
Q Consensus 185 ~~~~~~~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~----d~~i~iwd~~~~~~- 255 (532)
.|+| ++++++.++.++ .|.+||..++... .+. .+...+....+ ++|.+++.+. ++.|.+||+.++..
T Consensus 233 ~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~-~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~ 308 (695)
T 2bkl_A 233 DLSR-DGKYLFVYILRGWSENDVYWKRPGEKDFR-LLV-KGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARA 308 (695)
T ss_dssp EECT-TSCCEEEEEEETTTEEEEEEECTTCSSCE-EEE-ECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGG
T ss_pred EECC-CCCEEEEEEeCCCCceEEEEEcCCCCceE-Eee-cCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCcc
Confidence 9999 888888877666 6777765443322 222 34445566666 5555555544 36899999876531
Q ss_pred -eeEEccCC-CcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECC-CceEEEeeec--CCCeeEEEEecCCCEEE
Q 038802 256 -MVYSMESH-NKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYG-KMKVTHSMRF--PAPLMSVAFSPDCMTRV 330 (532)
Q Consensus 256 -~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~~~v~~~~~s~~~~~l~ 330 (532)
....+..+ ...+..++++ + +.++++...|+..++|.+. ++.....+.. .+.+..++++|++..++
T Consensus 309 ~~~~l~~~~~~~~l~~~~~~-~---------~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 309 SWKEIVPEDSSASLLSVSIV-G---------GHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAY 378 (695)
T ss_dssp GCEEEECCCSSCEEEEEEEE-T---------TEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEE
T ss_pred CCeEEecCCCCCeEEEEEEE-C---------CEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEE
Confidence 12223223 4567888887 3 5788899999988888654 3555555543 45678889999998776
Q ss_pred EEe----cCCcEEEEeecCccc
Q 038802 331 IGT----SNGTIFAGRRKKKEN 348 (532)
Q Consensus 331 ~g~----~dg~i~iw~~~~~~~ 348 (532)
... ..+.|++|++.+++.
T Consensus 379 ~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 379 YVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEEETTEEEEEEEEETTTCCE
T ss_pred EEEcCCCCCCEEEEEECCCCcE
Confidence 333 347899999987653
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.70 E-value=6.3e-15 Score=136.52 Aligned_cols=241 Identities=10% Similarity=-0.008 Sum_probs=170.1
Q ss_pred eeEEEEEccCCCEEE-EEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEe
Q 038802 95 VVTCSSFRPDGSLLA-ASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLD 173 (532)
Q Consensus 95 ~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 173 (532)
...+++++++|++++ +.+.++.|.+||..+.........+...+.++++++ ++.++++.. ++.|.+||..+......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCCEEC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceEeee
Confidence 678899999998776 546788999999765543322223345678899998 777555555 88999999876654332
Q ss_pred ccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccC
Q 038802 174 LFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIG 252 (532)
Q Consensus 174 ~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~ 252 (532)
.......+.++++.+ +++++++...++.|.+||..+..... ........+.+++++++|+++++.. ++.|.+||...
T Consensus 103 ~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTV-LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp CCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEE-CCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred ecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEe-eccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 223335688999999 88888887778899999765432221 1112334678899999999777776 68999999876
Q ss_pred CCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEE
Q 038802 253 GGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVI 331 (532)
Q Consensus 253 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~ 331 (532)
. ........+...+.+++++++ +.++++...++.|.+||........... ....+.+++++++|+.+++
T Consensus 181 ~-~~~~~~~~~~~~p~~i~~d~~---------g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~ 250 (270)
T 1rwi_B 181 N-NQVVLPFTDITAPWGIAVDEA---------GTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVA 250 (270)
T ss_dssp C-CEEECCCSSCCSEEEEEECTT---------CCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEE
T ss_pred C-ceEeecccCCCCceEEEECCC---------CCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEE
Confidence 5 333333333366889999988 5566666678899999987755433222 2356899999999998888
Q ss_pred EecCCcEEEEeecCcccc
Q 038802 332 GTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 332 g~~dg~i~iw~~~~~~~~ 349 (532)
...++.|.+++....+.+
T Consensus 251 ~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 251 DRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp EGGGTEEEEECCCGGGSC
T ss_pred ECCCCEEEEEcCCCcccc
Confidence 899999999998866543
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.70 E-value=1e-14 Score=139.20 Aligned_cols=257 Identities=12% Similarity=0.083 Sum_probs=183.2
Q ss_pred eCCeEEEEeCCCceEEEEeec------cCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEee
Q 038802 71 HSASLTLFSSQTLEKHSAISS------FKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYP 144 (532)
Q Consensus 71 ~d~~v~i~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~ 144 (532)
.++.|.+||..+++....+.. .......+.+. ++++.++...++.|.+||..+++.+..+. .......++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 378999999999887665421 22446777774 45556666668999999999999988885 45678899998
Q ss_pred cCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCC-----CceEEEEEeCCCCCEEEEEe-CCCeEEEEEcccCCceeEEE
Q 038802 145 FLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHK-----DYVRCGDCSPVNGDMFVTGS-YDHTVKLWDVRVENSKSVME 218 (532)
Q Consensus 145 ~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~i~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~ 218 (532)
+ ++..+++...++.|.+||..+++....+.... .....+++ . ++.++++.. .++.|.++|+.+++......
T Consensus 93 ~-~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 93 S-DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp E-TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred C-CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 8 67544444489999999999998877665332 13446666 3 455555544 48899999998865444443
Q ss_pred ecCCCcEEEEEEecCCCEEEEEc-C----------CeEEEEEccCCCeeeEEccCC-CcceEEEEEeccCCCCCcccccc
Q 038802 219 VNHGKPIEDVMFLPSGGLIATAG-G----------NSVKIWDLIGGGKMVYSMESH-NKTVTSVCVGRVGNESGEEAMQY 286 (532)
Q Consensus 219 ~~~~~~v~~i~~~~~~~~l~~~~-d----------~~i~iwd~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~ 286 (532)
.......+.++|+|++++++. + +.|.+||..++ +....+... ......++++|+ +.
T Consensus 170 --~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~-~v~~~~~~~~g~~p~~la~~~d---------~~ 237 (328)
T 3dsm_A 170 --IGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF-TVEKQFKFKLGDWPSEVQLNGT---------RD 237 (328)
T ss_dssp --CSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT-EEEEEEECCTTCCCEEEEECTT---------SC
T ss_pred --cCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC-eEEEEEecCCCCCceeEEEecC---------CC
Confidence 334557889999999887776 4 68999998876 555555432 236789999998 45
Q ss_pred EEEEEecCCeEEEEECCCceEEEe--eec-CCCeeEEEEec-CCCEEEEE----ecCCcEEEEeecCcc
Q 038802 287 RILSVALDGYMKVFDYGKMKVTHS--MRF-PAPLMSVAFSP-DCMTRVIG----TSNGTIFAGRRKKKE 347 (532)
Q Consensus 287 ~l~s~~~dg~i~iwd~~~~~~~~~--~~~-~~~v~~~~~s~-~~~~l~~g----~~dg~i~iw~~~~~~ 347 (532)
.++++.. .|.+||..+++.... +.. .....+++++| ++...++. ..+|.|.+|+.. ++
T Consensus 238 ~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 238 TLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp EEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred EEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 6666544 899999988776421 111 35688999999 45555555 578899999987 44
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.69 E-value=8.2e-15 Score=135.75 Aligned_cols=239 Identities=8% Similarity=-0.050 Sum_probs=169.2
Q ss_pred CeeEEEEcCCCCeEE-EEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEe
Q 038802 53 SINSIVFSPTTSHLF-AATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRL 131 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 131 (532)
...+++++|+|+.++ +.+.++.|.+||..+.........+...+.+++++++|+++++.. ++.|.+||...... ..+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EEC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eee
Confidence 668999999998555 336678999999766543322223335678899999999666666 88999999876543 333
Q ss_pred c-CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEccc
Q 038802 132 K-SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRV 210 (532)
Q Consensus 132 ~-~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~ 210 (532)
. .....+.++++++ ++.++++...++.|.+|+..+.............+.++++++ +++++++...++.|.+||...
T Consensus 103 ~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN-SGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp CCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT-TCCEEEEEGGGTEEEEECTTT
T ss_pred ecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC-CCCEEEEECCCCEEEEEecCC
Confidence 3 2336789999998 788777777788999998765544433333334677899998 888888777788999999876
Q ss_pred CCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEE
Q 038802 211 ENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRIL 289 (532)
Q Consensus 211 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~ 289 (532)
..... ....+...+.+++++++|.++++.. ++.|.+||.... ........+...+.+++++++ +.+++
T Consensus 181 ~~~~~-~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~-~~~~~~~~~~~~p~~i~~~~~---------g~l~v 249 (270)
T 1rwi_B 181 NNQVV-LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST-TSTVLPFTGLNTPLAVAVDSD---------RTVYV 249 (270)
T ss_dssp CCEEE-CCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS-CCEECCCCSCSCEEEEEECTT---------CCEEE
T ss_pred CceEe-ecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC-cceeeccCCCCCceeEEECCC---------CCEEE
Confidence 43222 1223336788999999998777776 789999998654 332222233456889999998 56788
Q ss_pred EEecCCeEEEEECCCce
Q 038802 290 SVALDGYMKVFDYGKMK 306 (532)
Q Consensus 290 s~~~dg~i~iwd~~~~~ 306 (532)
+...++.|+++++...+
T Consensus 250 ~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 250 ADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEGGGTEEEEECCCGGG
T ss_pred EECCCCEEEEEcCCCcc
Confidence 88889999999987643
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.69 E-value=1.1e-15 Score=161.48 Aligned_cols=245 Identities=10% Similarity=-0.068 Sum_probs=166.8
Q ss_pred ccccCeeEEEEcCCCCeEEEEEe-----CCeEEEEeCCCceEEEEeeccCcee--EEEEEccCCCEEEEEcCCCC-----
Q 038802 49 GLVSSINSIVFSPTTSHLFAATH-----SASLTLFSSQTLEKHSAISSFKDVV--TCSSFRPDGSLLAASDLSGL----- 116 (532)
Q Consensus 49 ~h~~~V~~i~~sp~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~g~~dg~----- 116 (532)
+|...+.+++|||||++||.+.. +..|++||+.+++... ..+...+ ..++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 56667999999999999885543 3589999999987641 1111222 67899999999999988776
Q ss_pred --------EEEEECCCCc----eEEEecCCCCCEEEEEeecCCCcEEEEEeCCC----eEEEEECCCCeEEEeccCCCCc
Q 038802 117 --------IQVFDVKSRT----PLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDG----IVKFWDVAGESVVLDLFGHKDY 180 (532)
Q Consensus 117 --------i~iwd~~~~~----~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~~~~~ 180 (532)
|++|++.++. .+.....|...+..+.|+| ++++|+.++.++ .|.+||..++... .+..+...
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~ 273 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVKGVGA 273 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEECSSC
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCceE-EeecCCCc
Confidence 9999998876 3333344667889999999 888888777665 6777876655433 34445555
Q ss_pred eEEEEEeCCCCCEEEEEe---CCCeEEEEEcccCCc--eeEEEecC-CCcEEEEEEecCCCEEEEEc-CCeEEEEEccCC
Q 038802 181 VRCGDCSPVNGDMFVTGS---YDHTVKLWDVRVENS--KSVMEVNH-GKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGG 253 (532)
Q Consensus 181 v~~i~~~~~~~~~l~s~s---~dg~i~iwd~~~~~~--~~~~~~~~-~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~ 253 (532)
+....+ + ++.+++.+. .++.|.+||+.++.. ...+...+ ...+..++++ ++.++++.. |+..++|.+...
T Consensus 274 ~~~~~~-~-~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 274 KYEVHA-W-KDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp CEEEEE-E-TTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred eEEEEe-c-CCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCC
Confidence 556666 4 445545444 257899999987543 12222222 4568888888 667777777 887777766532
Q ss_pred CeeeEEccCC-CcceEEEEEeccCCCCCccccccEEEEEe---cCCeEEEEECCCceEE
Q 038802 254 GKMVYSMESH-NKTVTSVCVGRVGNESGEEAMQYRILSVA---LDGYMKVFDYGKMKVT 308 (532)
Q Consensus 254 ~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~ 308 (532)
+.....+..+ ...+..+.++|++ ..++++.+ ..+.|++||+.+++..
T Consensus 351 g~~~~~l~~~~~~~v~~~~~s~d~--------~~l~~~~ss~~~P~~v~~~d~~~g~~~ 401 (695)
T 2bkl_A 351 GKPVRTVQLPGVGAASNLMGLEDL--------DDAYYVFTSFTTPRQIYKTSVSTGKSE 401 (695)
T ss_dssp CCEEEECCCSSSSEECCCBSCTTC--------SEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred CCeeEEecCCCCeEEEEeecCCCC--------CEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 3455556554 6677778888874 23444433 3478999999987743
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=8e-15 Score=141.25 Aligned_cols=223 Identities=10% Similarity=0.123 Sum_probs=154.7
Q ss_pred cCeeEEEEcCCCCeEEEEEeC---C--eEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCC------------
Q 038802 52 SSINSIVFSPTTSHLFAATHS---A--SLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLS------------ 114 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~~d---~--~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d------------ 114 (532)
..+.+++|+|||++|+.++.+ + .|++|++.+++....... .. +.+++|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 568899999999999987754 3 488889888776554443 34 9999999999999887632
Q ss_pred ---------------CCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCC---------eEEEEECCCCeE
Q 038802 115 ---------------GLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDG---------IVKFWDVAGESV 170 (532)
Q Consensus 115 ---------------g~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg---------~i~iwd~~~~~~ 170 (532)
..|.+||+.+++.+..+.. . .+..+.|+| ++ ++++++.++ .|.++| +++.
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~ 210 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWE--DGKE 210 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEE--TTEE
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeC--CCce
Confidence 5699999988876455544 3 788999999 77 777776542 455555 5554
Q ss_pred EEeccCCCCceEEEEEeCCCCCEEEEEeCC--------CeEEEEEcccCCceeEEEecCCCcEEE-EEEecCCCEEEEEc
Q 038802 171 VLDLFGHKDYVRCGDCSPVNGDMFVTGSYD--------HTVKLWDVRVENSKSVMEVNHGKPIED-VMFLPSGGLIATAG 241 (532)
Q Consensus 171 ~~~~~~~~~~v~~i~~~~~~~~~l~s~s~d--------g~i~iwd~~~~~~~~~~~~~~~~~v~~-i~~~~~~~~l~~~~ 241 (532)
. .+..+ ..+.++ +| +++.|+.++.+ ..|.+|| +++ .......+...+.. +.|+ ++ ++++++
T Consensus 211 ~-~l~~~-~~~~~~--sp-dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~~~~~~~~~~~~s-dg-~~~~~~ 280 (347)
T 2gop_A 211 E-KMFEK-VSFYAV--DS-DGERILLYGKPEKKYMSEHNKLYIYD--GKE-VMGILDEVDRGVGQAKIKD-GK-VYFTLF 280 (347)
T ss_dssp E-EEEEE-ESEEEE--EE-CSSCEEEEECCSSSCCCSSCEEEEEC--SSC-EEESSTTCCSEEEEEEEET-TE-EEEEEE
T ss_pred E-EeccC-cceeeE--CC-CCCEEEEEEccccCCccccceEEEEC--CCc-eEeccccCCcccCCccEEc-Cc-EEEEEe
Confidence 3 33334 445444 88 88888777654 3688888 332 22222245677886 8999 88 777777
Q ss_pred -CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeE-EEEECCCceE
Q 038802 242 -GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYM-KVFDYGKMKV 307 (532)
Q Consensus 242 -d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i-~iwd~~~~~~ 307 (532)
++.+++| +.++ ... .+..+...|.++.|+| . ++++++.++.. .+|.+. ++.
T Consensus 281 ~~~~~~l~-~~~g-~~~-~~~~~~~~v~~~~~s~-~----------~~~~~~~~~~~~~l~~~~-g~~ 333 (347)
T 2gop_A 281 EEGSVNLY-IWDG-EIK-PIAKGRHWIMGFDVDE-I----------VVYLKETATRLRELFTWD-GEE 333 (347)
T ss_dssp ETTEEEEE-EESS-SEE-EEECSSSEEEEEEESS-S----------EEEEEECSSSCCEEEEES-SSE
T ss_pred cCCcEEEE-EcCC-ceE-EEecCCCeEEeeeeeC-c----------EEEEEcCCCChHHheEeC-CcE
Confidence 8899999 8743 443 3334577899999987 3 56666666654 677665 543
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=3.3e-14 Score=131.69 Aligned_cols=231 Identities=11% Similarity=0.024 Sum_probs=172.5
Q ss_pred CCeEEEEEeCCeEEEEeCCCceEEEEeeccC-ceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCC-CCEEE
Q 038802 63 TSHLFAATHSASLTLFSSQTLEKHSAISSFK-DVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHT-RPVRF 140 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-~~i~~ 140 (532)
++.+++++.++.|.+||.++++.+..+..+. ..+.++.+.|+|+++++ .++.|..||. +++.+..+..+. ..+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 4688889999999999999999999998776 57899999999998883 4678999998 799999888653 57888
Q ss_pred EEeecCCCcEEEEEeC-CCeEEEEECCCCeEEEecc------CCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCc
Q 038802 141 VKYPFLDKLHLVSGGD-DGIVKFWDVAGESVVLDLF------GHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENS 213 (532)
Q Consensus 141 ~~~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~------~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~ 213 (532)
+.+.+ +++.+++.+. ++.|..+|. +++.+..+. .+......+++.+ +++++++.+.++.|..||.. ++.
T Consensus 82 ~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 82 ARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT-SCE
T ss_pred cEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCC-CCE
Confidence 99998 8999998887 888888886 677666553 1222344567788 89999999999999999987 655
Q ss_pred eeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCC------cceEEEEEeccCCCCCcccccc
Q 038802 214 KSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHN------KTVTSVCVGRVGNESGEEAMQY 286 (532)
Q Consensus 214 ~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~~~~~~~~~ 286 (532)
.-.+. ......++.+.++|++++++. ++.|..+|..++ +.+.++..+. ..+..+...++ +.
T Consensus 158 ~w~~~--~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG-~~~w~~~~~~~~~~~l~~~~~~~~~~~---------G~ 225 (276)
T 3no2_A 158 LNSVK--LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESN-RIVRRVNANDIEGVQLFFVAQLFPLQN---------GG 225 (276)
T ss_dssp EEEEE--CSSCCCEEEECTTSCEEEECBTTSEEEEECTTTC-CEEEEEEGGGSBSCCCSEEEEEEECTT---------SC
T ss_pred EEEEE--CCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCC-cEEEEecCCCCCCccccccccceEcCC---------CC
Confidence 44443 334566788889999998887 568999998877 6766664322 23677777777 44
Q ss_pred EEEEEecC--------CeEEEEEC-CCceEEEeee
Q 038802 287 RILSVALD--------GYMKVFDY-GKMKVTHSMR 312 (532)
Q Consensus 287 ~l~s~~~d--------g~i~iwd~-~~~~~~~~~~ 312 (532)
.+++.... +..+++.+ .+++++..+.
T Consensus 226 i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~ 260 (276)
T 3no2_A 226 LYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLN 260 (276)
T ss_dssp EEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred EEEEeccCccccccccCCceEEEECCCCCEEEEec
Confidence 55554211 13345555 4566666665
No 198
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=5.3e-14 Score=130.30 Aligned_cols=212 Identities=8% Similarity=-0.027 Sum_probs=166.5
Q ss_pred CCCEEEEEcCCCCEEEEECCCCceEEEecCCC-CCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCC-CCce
Q 038802 104 DGSLLAASDLSGLIQVFDVKSRTPLRRLKSHT-RPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGH-KDYV 181 (532)
Q Consensus 104 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~v 181 (532)
.+++|++++.++.|.+||.++++.+..+..+. ..+.++.+.| ++++++ +.++.|..||. +++.+..+..+ ...+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATK-AGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECT-TSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECC-CCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 46789999999999999999999999998776 4788999999 888777 45788999999 79888888765 3578
Q ss_pred EEEEEeCCCCCEEEEEeC-CCeEEEEEcccCCceeEEEecC-----CCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCC
Q 038802 182 RCGDCSPVNGDMFVTGSY-DHTVKLWDVRVENSKSVMEVNH-----GKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGG 254 (532)
Q Consensus 182 ~~i~~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~-----~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~ 254 (532)
.++.+.+ +++++++.+. ++.|..+|. +++....+.... ......+++.++|+++++.. ++.|..||.. +
T Consensus 80 ~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G- 155 (276)
T 3no2_A 80 QTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G- 155 (276)
T ss_dssp EEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S-
T ss_pred cccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C-
Confidence 8899999 9999999887 778888875 444444443221 12345667889999999988 8999999986 5
Q ss_pred eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecC-------CCeeEEEEecCCC
Q 038802 255 KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFP-------APLMSVAFSPDCM 327 (532)
Q Consensus 255 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------~~v~~~~~s~~~~ 327 (532)
+.+.++..+ ....++...++ +..+++++.++.|..+|..+++.+..+... ..+.+++..++|.
T Consensus 156 ~~~w~~~~~-~~~~~~~~~~~---------g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~ 225 (276)
T 3no2_A 156 QLLNSVKLS-GTPFSSAFLDN---------GDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGG 225 (276)
T ss_dssp CEEEEEECS-SCCCEEEECTT---------SCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSC
T ss_pred CEEEEEECC-CCccceeEcCC---------CCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCC
Confidence 677777654 34456677776 578888888889999999999999888622 1267888899999
Q ss_pred EEEEEe
Q 038802 328 TRVIGT 333 (532)
Q Consensus 328 ~l~~g~ 333 (532)
.+++..
T Consensus 226 i~v~~~ 231 (276)
T 3no2_A 226 LYICNW 231 (276)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 888764
No 199
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.66 E-value=3.4e-14 Score=138.09 Aligned_cols=273 Identities=14% Similarity=0.092 Sum_probs=193.1
Q ss_pred CCCCeEEEEEeC-----CeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEc----------CCCCEEEEECCCC
Q 038802 61 PTTSHLFAATHS-----ASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASD----------LSGLIQVFDVKSR 125 (532)
Q Consensus 61 p~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~----------~dg~i~iwd~~~~ 125 (532)
|+++.+++.... +.|.++|..+++.+.++.....+ .+.++|||++++++. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 566767766653 69999999999999999876666 899999999998876 3678999999999
Q ss_pred ceEEEecCC-------CCCEEEEEeecCCCcEEEEEeC--CCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEE
Q 038802 126 TPLRRLKSH-------TRPVRFVKYPFLDKLHLVSGGD--DGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVT 196 (532)
Q Consensus 126 ~~~~~~~~h-------~~~i~~~~~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s 196 (532)
+.+..+.-. ......+.|+| ++++++++.. ++.|.+.|+.+++.+..+.... +....|.....+++
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~~v~ 234 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD----CYHIFPASPTVFYM 234 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETTEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC----ceeeccCCCcEEEE
Confidence 988876521 12345788999 8888888764 5789999999999888775322 12334423466777
Q ss_pred EeCCCeEEEEEcccCCceeE----EEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeee-EEcc---CC----
Q 038802 197 GSYDHTVKLWDVRVENSKSV----MEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMV-YSME---SH---- 263 (532)
Q Consensus 197 ~s~dg~i~iwd~~~~~~~~~----~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~-~~~~---~~---- 263 (532)
.+.||.+.+.+..+++.... +..........+.+.+++..++... ++.+.+.|+......+ ..+. ..
T Consensus 235 ~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~ 314 (426)
T 3c75_H 235 NCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERAD 314 (426)
T ss_dssp EETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGG
T ss_pred EcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccc
Confidence 77888888888844333211 1111111112356788877665555 7899999986542111 1100 00
Q ss_pred ---CcceEEEEEeccCCCCCccccccEEEEEec----------CCeEEEEECCCceEEEeeecCCCeeEEEEecCCC-EE
Q 038802 264 ---NKTVTSVCVGRVGNESGEEAMQYRILSVAL----------DGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCM-TR 329 (532)
Q Consensus 264 ---~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~-~l 329 (532)
......+.+++++ .++++... ++.|.++|..+++.+..+.......+++|+|||+ .+
T Consensus 315 g~~p~g~~~va~s~dg---------~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~l 385 (426)
T 3c75_H 315 DWRPGGWQQTAYHRQS---------DRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLL 385 (426)
T ss_dssp TEEECSSSCEEEEGGG---------TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEE
T ss_pred ccccCCceeeEEcCCC---------CEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEE
Confidence 0111236889884 44444432 4579999999999999998777899999999999 88
Q ss_pred EEEe-cCCcEEEEeecCcccc
Q 038802 330 VIGT-SNGTIFAGRRKKKENV 349 (532)
Q Consensus 330 ~~g~-~dg~i~iw~~~~~~~~ 349 (532)
++.. .++.|.++|..+.+..
T Consensus 386 yv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 386 YALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp EEEETTTTEEEEEETTTCCEE
T ss_pred EEEcCCCCeEEEEECCCCCEE
Confidence 8887 5899999999988765
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.66 E-value=1.7e-14 Score=153.43 Aligned_cols=272 Identities=14% Similarity=0.050 Sum_probs=178.5
Q ss_pred cCCCCeEEEEEeCC-----eEEEEeCC---CceEEEEe------eccCceeEEEEEccCCCEEEEEcCC-----CCEEEE
Q 038802 60 SPTTSHLFAATHSA-----SLTLFSSQ---TLEKHSAI------SSFKDVVTCSSFRPDGSLLAASDLS-----GLIQVF 120 (532)
Q Consensus 60 sp~~~~l~~~~~d~-----~v~i~~~~---~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~g~~d-----g~i~iw 120 (532)
+|+|++++....++ .+.+.+.. .+.....+ .+|...+..++|||||++||.++.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 48999888776653 33444544 33332221 1233478899999999999977543 359999
Q ss_pred ECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCe--------------EEEEECCCCe----EEEeccCCCCceE
Q 038802 121 DVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGI--------------VKFWDVAGES----VVLDLFGHKDYVR 182 (532)
Q Consensus 121 d~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~--------------i~iwd~~~~~----~~~~~~~~~~~v~ 182 (532)
|+.+++.+.... +...+..++|+| + +.|+.++.|+. |++|++.++. .+.....+...+.
T Consensus 195 dl~tg~~~~~~~-~~~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~ 271 (741)
T 1yr2_A 195 GVADGKPLADEL-KWVKFSGLAWLG-N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGH 271 (741)
T ss_dssp ETTTCCEEEEEE-EEEESCCCEEST-T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred ECCCCCCCCccC-CCceeccEEEEC-C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEE
Confidence 999988755321 111234688999 7 77877776554 8999997764 3333333444688
Q ss_pred EEEEeCCCCCEEEEEeCCC-----eEEEEEcccC--CceeEEEecCCCcEEEEEEecCCCEEEEEc-C----CeEEEEEc
Q 038802 183 CGDCSPVNGDMFVTGSYDH-----TVKLWDVRVE--NSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G----NSVKIWDL 250 (532)
Q Consensus 183 ~i~~~~~~~~~l~s~s~dg-----~i~iwd~~~~--~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d----~~i~iwd~ 250 (532)
++.|+| ++++++..+.++ .|++||+.++ .....+. .+...+... ++|+|..|+..+ + +.|.+||+
T Consensus 272 ~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~ 348 (741)
T 1yr2_A 272 GASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI-PDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDL 348 (741)
T ss_dssp EEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE-CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEEC
T ss_pred EEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec-CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeC
Confidence 999999 999888877554 7999999875 2022232 333444444 347888776665 2 36999998
Q ss_pred cCC-CeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECC-CceEEEeee--cCCCeeEEEEecCC
Q 038802 251 IGG-GKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYG-KMKVTHSMR--FPAPLMSVAFSPDC 326 (532)
Q Consensus 251 ~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~--~~~~v~~~~~s~~~ 326 (532)
.++ ......+..+...+..+.++ + +.++++...|+..++|.+. ++.....+. ..+.+..++++|++
T Consensus 349 ~~~~~~~~~l~~~~~~~l~~~~~~-~---------~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~ 418 (741)
T 1yr2_A 349 SGSTPRFDTVVPESKDNLESVGIA-G---------NRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGD 418 (741)
T ss_dssp SSSSCEEEEEECCCSSEEEEEEEE-B---------TEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTC
T ss_pred CCCccccEEEecCCCCeEEEEEEE-C---------CEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCC
Confidence 764 24444444555566677776 3 5688888999987777554 455555555 34678889999998
Q ss_pred CEEEEE----ecCCcEEEEeecCcc
Q 038802 327 MTRVIG----TSNGTIFAGRRKKKE 347 (532)
Q Consensus 327 ~~l~~g----~~dg~i~iw~~~~~~ 347 (532)
..++.. ...+.|+.|++.+++
T Consensus 419 ~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 419 RHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp SCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CEEEEEEcCCCCCCEEEEEECCCCc
Confidence 766533 234789999998765
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.64 E-value=2.3e-12 Score=120.98 Aligned_cols=238 Identities=9% Similarity=-0.005 Sum_probs=172.5
Q ss_pred ccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEE-ecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCe
Q 038802 91 SFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRR-LKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGES 169 (532)
Q Consensus 91 ~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~-~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~ 169 (532)
.+...+.++++.++|++.++...++.|.+||.. +..... ...+...+.++++++ ++.++++...++.|..||.....
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~ 89 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKKGII 89 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCE
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCCCcE
Confidence 345678999999999988777768899999988 553332 223557799999998 78877777668899999986332
Q ss_pred EEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEE
Q 038802 170 VVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIW 248 (532)
Q Consensus 170 ~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iw 248 (532)
...........+.++++.+ ++.++++...++.|..||. ++.............+.+++++++|.+.++.. ++.|..|
T Consensus 90 ~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 167 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRI 167 (299)
T ss_dssp EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred EEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEE
Confidence 2222223456788999998 8888888777889999998 43333222223456789999999998888776 6899999
Q ss_pred EccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee---cCCCeeEEEEecC
Q 038802 249 DLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR---FPAPLMSVAFSPD 325 (532)
Q Consensus 249 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~s~~ 325 (532)
|. ++.........+...+.++++.++ +.++++...++.|.+||. +++... +. ....+.+++++++
T Consensus 168 ~~-~g~~~~~~~~~~~~~~~~i~~~~~---------g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~ 235 (299)
T 2z2n_A 168 TE-SGDITEFKIPTPASGPVGITKGND---------DALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAG 235 (299)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTT---------SSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECST
T ss_pred cC-CCcEEEeeCCCCCCcceeEEECCC---------CCEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCC
Confidence 98 542222223344556889999988 456666666889999999 666443 32 3357899999999
Q ss_pred CCEEEEEecCCcEEEEeec
Q 038802 326 CMTRVIGTSNGTIFAGRRK 344 (532)
Q Consensus 326 ~~~l~~g~~dg~i~iw~~~ 344 (532)
|+.+++...++.|..|+..
T Consensus 236 g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 236 IDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp TCEEEEETTTTEEEEEETT
T ss_pred CCEEEeccCCceEEEECCC
Confidence 9977776678899999873
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.63 E-value=7.4e-14 Score=148.58 Aligned_cols=244 Identities=11% Similarity=-0.012 Sum_probs=164.2
Q ss_pred cccCeeEEEEcCCCCeEEEEEeC-----CeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCC--------
Q 038802 50 LVSSINSIVFSPTTSHLFAATHS-----ASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGL-------- 116 (532)
Q Consensus 50 h~~~V~~i~~sp~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~-------- 116 (532)
|...+..++|||||++|+.++.+ ..|++||+.+++.... ..+...+..++|+|| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 44578899999999999887764 3699999999887543 222223357899999 99988876654
Q ss_pred ------EEEEECCCCce--EEEec--CCCCCEEEEEeecCCCcEEEEEeCCC-----eEEEEECCCC--eEEEeccCCCC
Q 038802 117 ------IQVFDVKSRTP--LRRLK--SHTRPVRFVKYPFLDKLHLVSGGDDG-----IVKFWDVAGE--SVVLDLFGHKD 179 (532)
Q Consensus 117 ------i~iwd~~~~~~--~~~~~--~h~~~i~~~~~~~~~~~~l~s~s~dg-----~i~iwd~~~~--~~~~~~~~~~~ 179 (532)
|++|++.++.. ...+. .+...+..+.|+| ++++|+..+.++ .|++||+.++ ++...+..+..
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 89999977652 22333 3444688999999 888888777544 8999999876 31344544555
Q ss_pred ceEEEEEeCCCCCEEEEEeCC----CeEEEEEcccCC-ceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCC
Q 038802 180 YVRCGDCSPVNGDMFVTGSYD----HTVKLWDVRVEN-SKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGG 253 (532)
Q Consensus 180 ~v~~i~~~~~~~~~l~s~s~d----g~i~iwd~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~ 253 (532)
.+.... +| +++.|+..+.+ +.|.+||+.++. ....+...+...+.++.++ ++.++++.. ++..++|.+...
T Consensus 318 ~~~~~~-~~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~ 394 (741)
T 1yr2_A 318 AQWDFV-DG-VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLD 394 (741)
T ss_dssp SCEEEE-EE-ETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETT
T ss_pred ceEEEE-ec-cCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCC
Confidence 554443 46 78877777653 459999987642 2233333445567778887 556666666 787666655422
Q ss_pred CeeeEEccC-CCcceEEEEEeccCCCCCccccccEEEEEe---cCCeEEEEECCCceE
Q 038802 254 GKMVYSMES-HNKTVTSVCVGRVGNESGEEAMQYRILSVA---LDGYMKVFDYGKMKV 307 (532)
Q Consensus 254 ~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~ 307 (532)
+.....+.. +...+..+.++|++ ..++++.+ ..+.|++||+.+++.
T Consensus 395 g~~~~~l~~~~~~~v~~~~~s~d~--------~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 395 GKPAGAVSLPGIGSASGLSGRPGD--------RHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp SCEEEECBCSSSCEEEEEECCBTC--------SCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred CCceeeccCCCCeEEEEeecCCCC--------CEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 245555554 36678889999874 33444433 347899999998874
No 203
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.63 E-value=1.8e-13 Score=130.60 Aligned_cols=255 Identities=15% Similarity=0.107 Sum_probs=180.5
Q ss_pred EEEEcCCCCeEEEEE----------eCCeEEEEeCCCceEEEEeeccC-------ceeEEEEEccCCCEEEEEcC--CCC
Q 038802 56 SIVFSPTTSHLFAAT----------HSASLTLFSSQTLEKHSAISSFK-------DVVTCSSFRPDGSLLAASDL--SGL 116 (532)
Q Consensus 56 ~i~~sp~~~~l~~~~----------~d~~v~i~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~g~~--dg~ 116 (532)
.++++|||++++++. .++.|.+||..+++.+..+.... .....+.|+|||++++++.. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 499999999888876 36789999999999888875422 24567899999999998863 689
Q ss_pred EEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCC-CeEEEeccCC----CCceE-EEEEeCCC
Q 038802 117 IQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAG-ESVVLDLFGH----KDYVR-CGDCSPVN 190 (532)
Q Consensus 117 i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~----~~~v~-~i~~~~~~ 190 (532)
|.++|+.+++.+.++.... . ...+ |.....+++.+.||.+.+.++.+ ++.......+ ..++. ...|.+.+
T Consensus 162 VsVID~~t~~vv~tI~v~g--~-~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~d 237 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPD--C-YHIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKA 237 (386)
T ss_dssp EEEEETTTTEEEEEEECCS--E-EEEE-EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTT
T ss_pred EEEEECCCCcEEEEEECCC--c-ceee-cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCC
Confidence 9999999999998886322 1 2334 43666788889999999999976 5543221111 12221 23555425
Q ss_pred CCEEEEEeCCCeEEEEEcccCCceeEEEec-----------CCCcEEEEEEecCCCEEEEEc-----------CCeEEEE
Q 038802 191 GDMFVTGSYDHTVKLWDVRVENSKSVMEVN-----------HGKPIEDVMFLPSGGLIATAG-----------GNSVKIW 248 (532)
Q Consensus 191 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----------~~~~v~~i~~~~~~~~l~~~~-----------d~~i~iw 248 (532)
+.+++ .+.+|.|.+.|+.+.......... .......++++++++.++... .+.|.++
T Consensus 238 G~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~vi 316 (386)
T 3sjl_D 238 GRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL 316 (386)
T ss_dssp TEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred CcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEE
Confidence 65444 566899999999765322111110 122344577899888776653 2479999
Q ss_pred EccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEE-EecCCeEEEEECCCceEEEeeecCCCeeEEEEecC
Q 038802 249 DLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILS-VALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPD 325 (532)
Q Consensus 249 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~ 325 (532)
|+.+. +.+..+.. ...+.++.+++++ ..+|++ ...++.|.++|..+++.+.+++..+..+.|.+++|
T Consensus 317 D~~t~-kv~~~i~v-g~~~~~lavs~D~--------~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 317 DAKTG-ERLAKFEM-GHEIDSINVSQDE--------KPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp ETTTC-CEEEEEEE-EEEECEEEECSSS--------SCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred ECCCC-eEEEEEEC-CCCcceEEECCCC--------CeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 99987 66666643 2367899999995 335555 45589999999999999999998888888888887
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.61 E-value=1.1e-12 Score=124.10 Aligned_cols=237 Identities=10% Similarity=0.027 Sum_probs=164.8
Q ss_pred ceeEEEEEccCCCEEEE-------EcCCCCEEEEECCCCceEEEec----CCCCCEEEEEeecCC-CcEEEEEeCCCeEE
Q 038802 94 DVVTCSSFRPDGSLLAA-------SDLSGLIQVFDVKSRTPLRRLK----SHTRPVRFVKYPFLD-KLHLVSGGDDGIVK 161 (532)
Q Consensus 94 ~~v~~~~~~~~~~~l~~-------g~~dg~i~iwd~~~~~~~~~~~----~h~~~i~~~~~~~~~-~~~l~s~s~dg~i~ 161 (532)
....+++|++++.++++ +..++.|.+||..+++...... ++...+.++++++ + +. ++.++.++.|.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~-~~g~-l~v~~~~~~l~ 95 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDR-DANQ-LFVADMRLGLL 95 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECS-SSSE-EEEEETTTEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEec-CCCc-EEEEECCCCEE
Confidence 45678999999988777 5668899999988776543222 2456789999998 6 55 44444455799
Q ss_pred EEECCCCeEEEe-ccC----CCCceEEEEEeCCCCCEEEEEeCC---------------CeEEEEEcccCCceeEEEecC
Q 038802 162 FWDVAGESVVLD-LFG----HKDYVRCGDCSPVNGDMFVTGSYD---------------HTVKLWDVRVENSKSVMEVNH 221 (532)
Q Consensus 162 iwd~~~~~~~~~-~~~----~~~~v~~i~~~~~~~~~l~s~s~d---------------g~i~iwd~~~~~~~~~~~~~~ 221 (532)
+||.. ++.... ... ....+.++++.+ +++++++...+ +.|..||.. ++.... ..+
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~--~~~ 170 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV--DTA 170 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE--EEE
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe--ccC
Confidence 99998 665443 221 123578999999 88888777655 567777765 332222 223
Q ss_pred CCcEEEEEEe----cCCCEEEEE-c-CCeEEEEEccCCCe-----eeEEccCCC-cceEEEEEeccCCCCCccccccEEE
Q 038802 222 GKPIEDVMFL----PSGGLIATA-G-GNSVKIWDLIGGGK-----MVYSMESHN-KTVTSVCVGRVGNESGEEAMQYRIL 289 (532)
Q Consensus 222 ~~~v~~i~~~----~~~~~l~~~-~-d~~i~iwd~~~~~~-----~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~l~ 289 (532)
......++++ |+++.++.+ . ++.|.+||+...+. ....+..+. .....++++++ +.+++
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~---------G~l~v 241 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDED---------NNLLV 241 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTT---------CCEEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCC---------CCEEE
Confidence 3456889999 999655444 4 68999999862222 233444444 56788999988 56677
Q ss_pred EEecCCeEEEEECCCceEEEeeecC-CCeeEEEEecCCCEEEE-EecCCcEEEEeecCc
Q 038802 290 SVALDGYMKVFDYGKMKVTHSMRFP-APLMSVAFSPDCMTRVI-GTSNGTIFAGRRKKK 346 (532)
Q Consensus 290 s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~-g~~dg~i~iw~~~~~ 346 (532)
+...++.|.+||..+++....+..+ ..+.+++|+|+|+.|++ ...++.|..|+....
T Consensus 242 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 242 ANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 7777889999999877766666533 67899999999995554 455688999988653
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.60 E-value=4.2e-12 Score=122.78 Aligned_cols=239 Identities=11% Similarity=0.044 Sum_probs=167.3
Q ss_pred EEEEcCCCCeEEEEE----------eCCeEEEEeCCCceEEEEeecc-------CceeEEEEEccCCCEEEEEcC--CCC
Q 038802 56 SIVFSPTTSHLFAAT----------HSASLTLFSSQTLEKHSAISSF-------KDVVTCSSFRPDGSLLAASDL--SGL 116 (532)
Q Consensus 56 ~i~~sp~~~~l~~~~----------~d~~v~i~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~g~~--dg~ 116 (532)
.++++|||++++++. .++.|.+||..+++.+..+... ......+.|+|||++|+++.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 999999999999886 3678999999998887776432 123457899999999998864 578
Q ss_pred EEEEECCCCceEEE-ecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEecc-----CCCCce-EEEEEeCC
Q 038802 117 IQVFDVKSRTPLRR-LKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLF-----GHKDYV-RCGDCSPV 189 (532)
Q Consensus 117 i~iwd~~~~~~~~~-~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-----~~~~~v-~~i~~~~~ 189 (532)
|.++| .+++.+.. +... + ++.+.|.....+++.+.||.+.++|. +++...... ....++ ....+.+
T Consensus 150 v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~- 222 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN- 222 (373)
T ss_pred EEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe-
Confidence 99999 99988877 6532 2 24455535566778889999999999 777663321 112221 2345566
Q ss_pred CCCEEEEEeCCCeEEEEEcccCCceeEEEec-----------CCCcEEEEEEecCCCEEEEEc-----------CCeEEE
Q 038802 190 NGDMFVTGSYDHTVKLWDVRVENSKSVMEVN-----------HGKPIEDVMFLPSGGLIATAG-----------GNSVKI 247 (532)
Q Consensus 190 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----------~~~~v~~i~~~~~~~~l~~~~-----------d~~i~i 247 (532)
++..++..+.++.+.+.|+..........+. .......+.++|+++.+..+. ++.|.+
T Consensus 223 ~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~V 302 (373)
T 2mad_H 223 KSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS 302 (373)
T ss_pred cCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEE
Confidence 4444444447789999998754322111111 123344578999988776653 247999
Q ss_pred EEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEe-cCCeEEEEECCCceEEEee
Q 038802 248 WDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVA-LDGYMKVFDYGKMKVTHSM 311 (532)
Q Consensus 248 wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~ 311 (532)
+|+.+. +.+.++.. .....++.|+|++ ..+++++. .++.|.+||+.+++.+..+
T Consensus 303 ID~~t~-~vv~~i~~-g~~p~~i~~s~Dg--------~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 303 VTGLVG-QTSSQISL-GHDVDAISVAQDG--------GPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EECCCC-EEEEEEEC-CCCcCeEEECCCC--------CeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 999887 77677643 3357899999994 32677766 5899999999999998873
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.57 E-value=2.5e-12 Score=121.70 Aligned_cols=238 Identities=8% Similarity=0.066 Sum_probs=163.5
Q ss_pred ccCeeEEEEcCCCCeEEE-------EEeCCeEEEEeCCCceEEEEee----ccCceeEEEEEccC-CCEEEEEcCCCCEE
Q 038802 51 VSSINSIVFSPTTSHLFA-------ATHSASLTLFSSQTLEKHSAIS----SFKDVVTCSSFRPD-GSLLAASDLSGLIQ 118 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~-------~~~d~~v~i~~~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~~g~~dg~i~ 118 (532)
.....+++|++++..+++ ++.++.|.+||..+++...... ++...+.+++++++ |+++++.. .+.|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEE
Confidence 345679999999987666 5778999999988776543222 24467899999999 76555554 44799
Q ss_pred EEECCCCceEEE-ecC----CCCCEEEEEeecCCCcEEEEEeCC---------------CeEEEEECCCCeEEEeccCCC
Q 038802 119 VFDVKSRTPLRR-LKS----HTRPVRFVKYPFLDKLHLVSGGDD---------------GIVKFWDVAGESVVLDLFGHK 178 (532)
Q Consensus 119 iwd~~~~~~~~~-~~~----h~~~i~~~~~~~~~~~~l~s~s~d---------------g~i~iwd~~~~~~~~~~~~~~ 178 (532)
+||.. ++.... ... ....+.++++++ ++.++++...+ +.|..||.. ++.... ..+.
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~-~~~~ 171 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV-DTAF 171 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE-EEEE
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe-ccCC
Confidence 99988 665433 221 123578999998 77777766655 578888876 544332 2233
Q ss_pred CceEEEEEe----CCCCCEE-EEEeCCCeEEEEEcc-cCCce---eEEEec-CC-CcEEEEEEecCCCEEEEEc-CCeEE
Q 038802 179 DYVRCGDCS----PVNGDMF-VTGSYDHTVKLWDVR-VENSK---SVMEVN-HG-KPIEDVMFLPSGGLIATAG-GNSVK 246 (532)
Q Consensus 179 ~~v~~i~~~----~~~~~~l-~s~s~dg~i~iwd~~-~~~~~---~~~~~~-~~-~~v~~i~~~~~~~~l~~~~-d~~i~ 246 (532)
.....++++ | +++.+ ++.+.++.|.+||.. .+... ...... +. ..+..++++++|+++++.. ++.|.
T Consensus 172 ~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 172 QFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp SSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred CCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 456788999 8 77554 455567899999986 22211 111111 22 5678899999999888775 78999
Q ss_pred EEEccCCCeeeEEccCCCcceEEEEEeccCCCCCcccccc-EEEEEecCCeEEEEECCC
Q 038802 247 IWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQY-RILSVALDGYMKVFDYGK 304 (532)
Q Consensus 247 iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~ 304 (532)
+||..++ +....+..+...+.+++++++ +. ++++...++.|..|++..
T Consensus 251 ~~d~~~g-~~~~~~~~~~~~~~~i~~~~d---------g~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 251 VFGPDGG-QPKMRIRCPFEKPSNLHFKPQ---------TKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EECTTCB-SCSEEEECSSSCEEEEEECTT---------SSEEEEEETTTTEEEEEECSS
T ss_pred EEcCCCC-cEeEEEeCCCCCceeEEECCC---------CCEEEEEeCCCCeEEEEeCCC
Confidence 9998754 444555556678899999888 45 455555678999999764
No 207
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.54 E-value=1.8e-13 Score=131.07 Aligned_cols=174 Identities=18% Similarity=0.135 Sum_probs=136.2
Q ss_pred CeeEEEEcCCCCeEEEEEeCCeEEEEeCCCce----------EEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEEC
Q 038802 53 SINSIVFSPTTSHLFAATHSASLTLFSSQTLE----------KHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDV 122 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~ 122 (532)
+++.+++++...++++|+.+ .+.+|++++.. .......+.. |+.++| |+++|+++ .+|.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 68999999999999988886 46669865433 1111223556 999999 99999999 7899999999
Q ss_pred CCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCe
Q 038802 123 KSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHT 202 (532)
Q Consensus 123 ~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~ 202 (532)
.+.........|..++.++.+.+ . .+++++.||.|.+||+.++.... +...|+|++|+| +| ++.|..||+
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~-p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSp-kG--~~vg~~dg~ 183 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVN-N--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTN-SQ--LAVLLKDRS 183 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECS-S--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECS-SE--EEEEETTSC
T ss_pred hhhhccCccceeecceeeEEecC-C--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcC-Cc--eEEEEcCCc
Confidence 88766666777888899888765 2 28889999999999999877653 456899999999 77 788999999
Q ss_pred EEEEEcccCCc--eeEEE--------ecCCCcEEEEEEecCCCEEEEEc
Q 038802 203 VKLWDVRVENS--KSVME--------VNHGKPIEDVMFLPSGGLIATAG 241 (532)
Q Consensus 203 i~iwd~~~~~~--~~~~~--------~~~~~~v~~i~~~~~~~~l~~~~ 241 (532)
+++|+...... ...+. .+|...|.++.|.+++.++++-.
T Consensus 184 i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 184 FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 99998876443 22231 13678999999999999888743
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.54 E-value=9.8e-12 Score=121.96 Aligned_cols=234 Identities=8% Similarity=-0.062 Sum_probs=164.3
Q ss_pred ceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCC--eEEEEECCCCeEE
Q 038802 94 DVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDG--IVKFWDVAGESVV 171 (532)
Q Consensus 94 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg--~i~iwd~~~~~~~ 171 (532)
.....++|+++++++++...++.|++||..++...........+ . ++|++ ++..++++..++ .|.+|+...+...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~-~-ia~~~-~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG-K-PAVTK-DKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC-B-CEECT-TSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC-c-eeEec-CCCcEEEEecCCCceEEEEEcCCCcee
Confidence 35789999999998888887899999999887766555443333 3 89999 888888888766 7999998765443
Q ss_pred Eec----cCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEE---EecCCCc--EEEEEEecC-CCEEEEEc
Q 038802 172 LDL----FGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVM---EVNHGKP--IEDVMFLPS-GGLIATAG 241 (532)
Q Consensus 172 ~~~----~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~~~~--v~~i~~~~~-~~~l~~~~ 241 (532)
..+ ......+.+++++| ++..|+.+..++.|+.||..+....... ....... ...++|+|+ +.++++..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p-~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDE-TEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECT-TSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EEeeeccchhcCCcEEEEEeC-CCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 333 22445677899998 5555555777889999998865432221 1111111 238999995 55555555
Q ss_pred -CCeEEEEEccCCCeeeEEccCCC---------------cceEEEEEeccCCCCCccccccEEEEEe-cCCeEEEEECCC
Q 038802 242 -GNSVKIWDLIGGGKMVYSMESHN---------------KTVTSVCVGRVGNESGEEAMQYRILSVA-LDGYMKVFDYGK 304 (532)
Q Consensus 242 -d~~i~iwd~~~~~~~~~~~~~~~---------------~~i~~~~~~~~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~ 304 (532)
.+.|+.|+.... ...+.++. .....++++++ +.++++-+ .++.|+.||+.+
T Consensus 287 ~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d---------G~lyvad~~~~~~I~~~~~~~ 354 (409)
T 3hrp_A 287 NLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDED---------GNFYIVDGFKGYCLRKLDILD 354 (409)
T ss_dssp TTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT---------CCEEEEETTTTCEEEEEETTT
T ss_pred CCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC---------CCEEEEeCCCCCEEEEEECCC
Confidence 689999997543 22222221 34788999998 45677777 789999999888
Q ss_pred ceEEEeeec---------------CCCeeEEEEecCCCEEEEEecCCcEEEEee
Q 038802 305 MKVTHSMRF---------------PAPLMSVAFSPDCMTRVIGTSNGTIFAGRR 343 (532)
Q Consensus 305 ~~~~~~~~~---------------~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~ 343 (532)
+.......+ -.....++++++|.++++-..++.|+.+++
T Consensus 355 G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 355 GYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 876544433 135789999999888888888888888765
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.53 E-value=8.2e-11 Score=110.28 Aligned_cols=237 Identities=9% Similarity=-0.051 Sum_probs=169.9
Q ss_pred cCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEE-EecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeE
Q 038802 92 FKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLR-RLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESV 170 (532)
Q Consensus 92 ~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~-~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~ 170 (532)
....+.++++.++|++.++...++.|.+||.. ++... .+..+...+.++++.+ ++.+.++...++.|..||.. ++.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECCC-CCe
Confidence 34578899999999988887778999999987 55433 2233446789999998 77777776668899999988 554
Q ss_pred E-EeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEE
Q 038802 171 V-LDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIW 248 (532)
Q Consensus 171 ~-~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iw 248 (532)
. .........+.++++.+ ++.++++...++.|..||.. ++............+.+++++++|++.++.. ++.|..|
T Consensus 95 ~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp EEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred EEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 3 22233446788999998 88888887778899999986 4333222212456789999999999777776 6799999
Q ss_pred EccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEe-ee-cCCCeeEEEEecCC
Q 038802 249 DLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHS-MR-FPAPLMSVAFSPDC 326 (532)
Q Consensus 249 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~-~~~~v~~~~~s~~~ 326 (532)
|. ++.........+...+.++++.++ +.++++....+.|.+||. +++.... .. ....+.+++++++|
T Consensus 173 ~~-~g~~~~~~~~~~~~~~~~i~~d~~---------g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g 241 (300)
T 2qc5_A 173 TN-TGKLEEYPLPTNAAAPVGITSGND---------GALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNS 241 (300)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTT---------SSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTT
T ss_pred CC-CCcEEEeeCCCCCCCcceEEECCC---------CCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCC
Confidence 98 442322223344556889999887 455666566778999998 5444332 22 33568899999999
Q ss_pred CEEEEEecCCcEEEEeec
Q 038802 327 MTRVIGTSNGTIFAGRRK 344 (532)
Q Consensus 327 ~~l~~g~~dg~i~iw~~~ 344 (532)
+..++...++.|..|+..
T Consensus 242 ~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 242 EIWFTEWGANQIGRITND 259 (300)
T ss_dssp CEEEEETTTTEEEEECTT
T ss_pred CEEEeccCCCeEEEECCC
Confidence 977776677899999873
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.53 E-value=3.5e-11 Score=112.88 Aligned_cols=227 Identities=13% Similarity=0.114 Sum_probs=154.7
Q ss_pred CceeEEEEEccC-CCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEE
Q 038802 93 KDVVTCSSFRPD-GSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVV 171 (532)
Q Consensus 93 ~~~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~ 171 (532)
..-.-+..|+++ +.++++...++.|..||..++.. ..+. ....+.++++++ ++.++ .+. ++.|.+||..+++..
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~-dG~l~-v~~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQ-SGGYV-ATI-GTKFCALNWKEQSAV 86 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBT-TSSEE-EEE-TTEEEEEETTTTEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECC-CCCEE-EEE-CCeEEEEECCCCcEE
Confidence 344567889995 55666777789999999987764 3333 456799999998 77744 444 568999999887654
Q ss_pred EeccC----CCCceEEEEEeCCCCCEEEEEeCC---------CeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEE
Q 038802 172 LDLFG----HKDYVRCGDCSPVNGDMFVTGSYD---------HTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIA 238 (532)
Q Consensus 172 ~~~~~----~~~~v~~i~~~~~~~~~l~s~s~d---------g~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 238 (532)
..... ....++.++++| +++++++...+ ..-.+|.+......... .........++|+|+++.++
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~-~~~~~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKY-FDQVDISNGLDWSLDHKIFY 164 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEE-EEEESBEEEEEECTTSCEEE
T ss_pred EEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEE-eeccccccceEEcCCCCEEE
Confidence 32221 224578899999 88877655322 22345544432222222 23334568899999998665
Q ss_pred EEc--CCeEEEEEcc--CCC----eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEe
Q 038802 239 TAG--GNSVKIWDLI--GGG----KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHS 310 (532)
Q Consensus 239 ~~~--d~~i~iwd~~--~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 310 (532)
.+. ++.|.+||+. ++. +....+..+......+++.++ +.+.++...++.|..||..+++.+..
T Consensus 165 v~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~---------G~lwva~~~~~~v~~~d~~tG~~~~~ 235 (297)
T 3g4e_A 165 YIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE---------GKLWVACYNGGRVIRLDPVTGKRLQT 235 (297)
T ss_dssp EEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT---------SCEEEEEETTTEEEEECTTTCCEEEE
T ss_pred EecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC---------CCEEEEEcCCCEEEEEcCCCceEEEE
Confidence 544 6899999974 331 123333334456788999888 55666666778899999999999888
Q ss_pred eecC-CCeeEEEEe-cCCCEEEEEecC
Q 038802 311 MRFP-APLMSVAFS-PDCMTRVIGTSN 335 (532)
Q Consensus 311 ~~~~-~~v~~~~~s-~~~~~l~~g~~d 335 (532)
+..+ ..+++++|. |+++.|++++..
T Consensus 236 i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 236 VKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred EECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 8855 689999998 888887766653
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.51 E-value=1.8e-11 Score=120.08 Aligned_cols=235 Identities=12% Similarity=0.071 Sum_probs=162.2
Q ss_pred ccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCC--CEEEEECCCCceE
Q 038802 51 VSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSG--LIQVFDVKSRTPL 128 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg--~i~iwd~~~~~~~ 128 (532)
......++|+|+++++++...++.|++||..++.......... ... ++|+++++.|+++..++ .|.+|+...+...
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 3467899999999866666667899999998877665554433 333 99999999999888766 7888888765544
Q ss_pred EEe----cCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEe----ccCCCCce--EEEEEeCCCCCEEEEEe
Q 038802 129 RRL----KSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLD----LFGHKDYV--RCGDCSPVNGDMFVTGS 198 (532)
Q Consensus 129 ~~~----~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~----~~~~~~~v--~~i~~~~~~~~~l~s~s 198 (532)
..+ ......+.+++++| ++..|+.+..++.|+.||..++..... ..++...- ..++|+|.++.++++..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p-~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDE-TEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECT-TSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EEeeeccchhcCCcEEEEEeC-CCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 444 22456678899998 455566677789999999987754332 22222222 38999994466677777
Q ss_pred CCCeEEEEEcccCCceeEEEecC---------------CCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCeeeEEcc
Q 038802 199 YDHTVKLWDVRVENSKSVMEVNH---------------GKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKMVYSME 261 (532)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~---------------~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~ 261 (532)
.++.|+.||.... .... .++ -.....++++|+|+++++-. ++.|+.||+.++ . +..+.
T Consensus 287 ~~~~I~~~~~~g~--~~~~-~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G-~-v~~~~ 361 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWF-CGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG-Y-VSTVA 361 (409)
T ss_dssp TTTEEEEECTTCC--EEEE-EECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT-E-EEEEE
T ss_pred CCCEEEEEecCCC--EEEE-EeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC-E-EEEEe
Confidence 7889999997642 2222 122 13478999999999777765 469999997665 3 33333
Q ss_pred CC---------------CcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEEC
Q 038802 262 SH---------------NKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDY 302 (532)
Q Consensus 262 ~~---------------~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 302 (532)
++ -.....++++++ +.++++-..++.|+.+++
T Consensus 362 g~~~~~g~~~g~~~~~~~~~P~giavd~~---------g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 362 GQVDVASQIDGTPLEATFNYPYDICYDGE---------GGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ECTTCBSCCCBSTTTCCBSSEEEEEECSS---------SEEEEEESTTCEEEEEEE
T ss_pred CCCCCCCcCCCChhceEeCCceEEEEcCC---------CCEEEEECCCCeEEEEEe
Confidence 32 134678888887 456667677777777664
No 212
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.50 E-value=4.5e-12 Score=123.23 Aligned_cols=241 Identities=13% Similarity=0.096 Sum_probs=169.4
Q ss_pred EEEEcCCCCeEEEEE----------eCCeEEEEeCCCceEEEEeecc-------CceeEEEEEccCCCEEEEEcC--CCC
Q 038802 56 SIVFSPTTSHLFAAT----------HSASLTLFSSQTLEKHSAISSF-------KDVVTCSSFRPDGSLLAASDL--SGL 116 (532)
Q Consensus 56 ~i~~sp~~~~l~~~~----------~d~~v~i~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~g~~--dg~ 116 (532)
.++++||+++++++. .++.|.++|..+++.+..+... ......+.|+|||++++++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 899999999888876 3678999999999988887532 233457899999999998864 578
Q ss_pred EEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEe----ccCCCCce-EEEEEeCCCC
Q 038802 117 IQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLD----LFGHKDYV-RCGDCSPVNG 191 (532)
Q Consensus 117 i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~----~~~~~~~v-~~i~~~~~~~ 191 (532)
|.++|+.+++.+..+.... . ....|.....+++.+.||.+.+.+..+++.... +.....++ ..+.+.+ ++
T Consensus 202 VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~-dg 276 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSL-RS 276 (426)
T ss_dssp EEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECT-TT
T ss_pred EEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecC-CC
Confidence 9999999999888876422 1 223342446677788899988888866655422 22112221 1345677 77
Q ss_pred CEEEEEeCCCeEEEEEcccCCceeE--EEec---------CCCcEEEEEEecCCCEEEEEc-----------CCeEEEEE
Q 038802 192 DMFVTGSYDHTVKLWDVRVENSKSV--MEVN---------HGKPIEDVMFLPSGGLIATAG-----------GNSVKIWD 249 (532)
Q Consensus 192 ~~l~s~s~dg~i~iwd~~~~~~~~~--~~~~---------~~~~v~~i~~~~~~~~l~~~~-----------d~~i~iwd 249 (532)
..++..+..+.+.+.|......... +... .......++++|++..+++.. ++.|.++|
T Consensus 277 ~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 277 GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence 7776667889999999865332111 1100 011222368999988666553 24799999
Q ss_pred ccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEe-cCCeEEEEECCCceEEEee
Q 038802 250 LIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVA-LDGYMKVFDYGKMKVTHSM 311 (532)
Q Consensus 250 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~ 311 (532)
+.+. +.+.++.. ......+.|+|++ ..+++++. .++.|.++|+.+++.+.++
T Consensus 357 ~~T~-kvv~~I~v-g~~P~gia~spDg--------~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 357 AETG-ERINKIEL-GHEIDSINVSQDA--------EPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTTC-CEEEEEEE-EEEECEEEECCSS--------SCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCC-eEEEEEEC-CCCcCeEEEccCC--------CEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 9887 66666653 2357899999994 32677776 5999999999999999887
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.47 E-value=3.1e-11 Score=113.72 Aligned_cols=230 Identities=11% Similarity=0.043 Sum_probs=155.4
Q ss_pred eeccCceeEEEEEccCCC-EEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCC
Q 038802 89 ISSFKDVVTCSSFRPDGS-LLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAG 167 (532)
Q Consensus 89 ~~~~~~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~ 167 (532)
+...........|+|+|+ +++++..++.|..|+. ++. ...+..+...+..+++++ ++.++++...++.|.+|+..
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~- 115 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD- 115 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-
Confidence 333344567789999998 6677777899999998 444 445555667789999998 78766655566889999986
Q ss_pred CeEEEecc---C-CCCceEEEEEeCCCCCEEEE----EeC-------------CCeEEEEEcccCCceeEEEecCCCcEE
Q 038802 168 ESVVLDLF---G-HKDYVRCGDCSPVNGDMFVT----GSY-------------DHTVKLWDVRVENSKSVMEVNHGKPIE 226 (532)
Q Consensus 168 ~~~~~~~~---~-~~~~v~~i~~~~~~~~~l~s----~s~-------------dg~i~iwd~~~~~~~~~~~~~~~~~v~ 226 (532)
++...... + ....+.++++.| +++++++ |.. .+.|..||..+++..... ......
T Consensus 116 g~~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~~p~ 191 (305)
T 3dr2_A 116 GQAHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLDHPN 191 (305)
T ss_dssp SCEEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EESSEE
T ss_pred CCEEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCCCCc
Confidence 54322211 1 113466799999 8988886 432 256777887655443332 234567
Q ss_pred EEEEecCCCEEEEEc-C------CeEEEEEccCCCeee--EE-ccCCCcceEEEEEeccCCCCCccccccEEEEEecCCe
Q 038802 227 DVMFLPSGGLIATAG-G------NSVKIWDLIGGGKMV--YS-MESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGY 296 (532)
Q Consensus 227 ~i~~~~~~~~l~~~~-d------~~i~iwd~~~~~~~~--~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~ 296 (532)
.++|+|+++.|+.+. . +.|.+|++.... .. .. ..........+++.++| . +.+++.+ .
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G---------~-lwv~~~~-g 259 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGG---------W-LWSSSGT-G 259 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTS---------C-EEECCSS-E
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCC---------C-EEEecCC-c
Confidence 899999999776665 4 689999987542 11 01 11123334567888774 4 5555544 4
Q ss_pred EEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCcEE
Q 038802 297 MKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIF 339 (532)
Q Consensus 297 i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~ 339 (532)
|.+|+. +++.+..+..+..+.+++|+++++.|+.++.++..+
T Consensus 260 v~~~~~-~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 260 VCVFDS-DGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp EEEECT-TSCEEEEEECSSCCCEEEECTTSCEEEEEETTEEEE
T ss_pred EEEECC-CCCEEEEEECCCceeEEEEeCCCCEEEEEcCCeEEE
Confidence 999998 567777777666799999999999998888765433
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=1.4e-12 Score=125.21 Aligned_cols=265 Identities=9% Similarity=-0.036 Sum_probs=172.8
Q ss_pred cCeeEEEEcCCCCeEEEEEe--CCeEEEEeCCCceEEEEee-------ccCceeEEEEEccCCCEEEEEcC-----CCCE
Q 038802 52 SSINSIVFSPTTSHLFAATH--SASLTLFSSQTLEKHSAIS-------SFKDVVTCSSFRPDGSLLAASDL-----SGLI 117 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~g~~-----dg~i 117 (532)
..+..++++|+|+.+++... ++.++||.+.+++.. .+. .+-..+.++++++++++.++... ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 57899999999987777542 342444444355432 221 23467999999999886666543 5789
Q ss_pred EEEECCCCceEEEecCC------CCCEEEEEeecCCCcEEEEEe---CCCeEEEEECCCCeEEEeccCCCCceE-EEEEe
Q 038802 118 QVFDVKSRTPLRRLKSH------TRPVRFVKYPFLDKLHLVSGG---DDGIVKFWDVAGESVVLDLFGHKDYVR-CGDCS 187 (532)
Q Consensus 118 ~iwd~~~~~~~~~~~~h------~~~i~~~~~~~~~~~~l~s~s---~dg~i~iwd~~~~~~~~~~~~~~~~v~-~i~~~ 187 (532)
.+||+.+++.+..+... ...+..+++++.++..+++.+ .++.|.+||+.+++....+.+|..... ...+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 99999998877666432 235688999973455555555 678999999998887776655432111 13344
Q ss_pred CCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C-CeEEEEEccC--CCe-----eeE
Q 038802 188 PVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G-NSVKIWDLIG--GGK-----MVY 258 (532)
Q Consensus 188 ~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d-~~i~iwd~~~--~~~-----~~~ 258 (532)
+ ++..+.+.+.++.++.|. ..+..++|+|+|+.|+.+. + ..+..++... ... ...
T Consensus 176 ~-~g~~~~~~~~~g~~~~~~---------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 239 (343)
T 2qe8_A 176 I-DGVPVQIGQPDGTVIRPH---------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGS 239 (343)
T ss_dssp E-TTEECBEECTTSCEECCC---------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHT
T ss_pred E-CCEEEEeccCCCceecee---------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhc
Confidence 4 566677777777776553 2357899999998877776 4 4566555321 000 000
Q ss_pred --EccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeec--CCCeeEEEEecCCCEEEEEec
Q 038802 259 --SMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRF--PAPLMSVAFSPDCMTRVIGTS 334 (532)
Q Consensus 259 --~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~g~~ 334 (532)
...++......++++++ +.++++...++.|.+||..+++....... -..+.+++|.++|.++++.+.
T Consensus 240 ~~~~~g~~g~pdgia~d~~---------G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 240 KIERYSEKPICDGISIDKD---------HNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp TCEEEEECCSCSCEEECTT---------CCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred ceEecccCCCCceEEECCC---------CCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence 01122334557888887 56788888899999999856665433332 345789999999888887766
Q ss_pred CCcEEEEe
Q 038802 335 NGTIFAGR 342 (532)
Q Consensus 335 dg~i~iw~ 342 (532)
.+.+.+|.
T Consensus 311 ~~~~~~f~ 318 (343)
T 2qe8_A 311 LHHSAPLN 318 (343)
T ss_dssp GGGSGGGB
T ss_pred cccccccc
Confidence 55544443
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.46 E-value=3.7e-11 Score=112.73 Aligned_cols=215 Identities=15% Similarity=0.142 Sum_probs=145.1
Q ss_pred CeeEEEEcCCCCeEE-EEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEe
Q 038802 53 SINSIVFSPTTSHLF-AATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRL 131 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 131 (532)
-.-+..|+|++..++ +...++.|..||..++... .+ .....+.+++++++|+++++ . ++.|.+||..+++.....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEE
Confidence 345889999655444 4455789999999876652 22 23568999999999995555 4 567999999877654332
Q ss_pred cC----CCCCEEEEEeecCCCcEEEEEeC-----------CCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEE-E
Q 038802 132 KS----HTRPVRFVKYPFLDKLHLVSGGD-----------DGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMF-V 195 (532)
Q Consensus 132 ~~----h~~~i~~~~~~~~~~~~l~s~s~-----------dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l-~ 195 (532)
.. ....+.+++++| ++.++++... .+.|..++.. ++.. .+..+....+.++|+| +++.+ +
T Consensus 90 ~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~-~~~~~~~~pngi~~sp-dg~~lyv 165 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVK-KYFDQVDISNGLDWSL-DHKIFYY 165 (297)
T ss_dssp ECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEE-EEEEEESBEEEEEECT-TSCEEEE
T ss_pred ecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECC-CCEE-EEeeccccccceEEcC-CCCEEEE
Confidence 21 123478899999 7776665432 2345555543 3332 2333344567899999 87755 5
Q ss_pred EEeCCCeEEEEEcc--cCCce--e-EEEe-cCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceE
Q 038802 196 TGSYDHTVKLWDVR--VENSK--S-VMEV-NHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVT 268 (532)
Q Consensus 196 s~s~dg~i~iwd~~--~~~~~--~-~~~~-~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~ 268 (532)
+.+.++.|.+||+. ++... . .... ........++++++|++.++.. ++.|.+||..++ +.+..+..+...++
T Consensus 166 ~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG-~~~~~i~~p~~~~t 244 (297)
T 3g4e_A 166 IDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG-KRLQTVKLPVDKTT 244 (297)
T ss_dssp EEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC-CEEEEEECSSSBEE
T ss_pred ecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc-eEEEEEECCCCCce
Confidence 56667899999974 33221 1 1111 2335678999999998777776 678999998766 67777777777899
Q ss_pred EEEEe-ccC
Q 038802 269 SVCVG-RVG 276 (532)
Q Consensus 269 ~~~~~-~~~ 276 (532)
+++|. |++
T Consensus 245 ~~~f~g~d~ 253 (297)
T 3g4e_A 245 SCCFGGKNY 253 (297)
T ss_dssp EEEEESGGG
T ss_pred EEEEeCCCC
Confidence 99998 763
No 216
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.45 E-value=2.1e-11 Score=127.45 Aligned_cols=271 Identities=11% Similarity=0.086 Sum_probs=186.9
Q ss_pred CCeEEEEEeCCeEEEEeCCCceEEEEeeccCce-----------eEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEe
Q 038802 63 TSHLFAATHSASLTLFSSQTLEKHSAISSFKDV-----------VTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRL 131 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 131 (532)
+..+++++.++.|.-+|..+|+.+..+...... ...+++ ++..+++++.|+.+..+|..+++.+..+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 456778888899999999999998887543210 112233 4568888888999999999999998887
Q ss_pred cCC-C----CCEEE-EEeecCCCcEEEEEeC------CCeEEEEECCCCeEEEeccCCCCc-------------------
Q 038802 132 KSH-T----RPVRF-VKYPFLDKLHLVSGGD------DGIVKFWDVAGESVVLDLFGHKDY------------------- 180 (532)
Q Consensus 132 ~~h-~----~~i~~-~~~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~------------------- 180 (532)
..+ . ..+.+ .... ++ .+++++. ++.|+.||..+++.+..+......
T Consensus 155 ~~~~~~~~~~~~~~~p~v~--~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVF--KG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEE--TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred cCCcCcCcCcccccCcEEE--CC-EEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 754 2 11111 1111 33 4555543 799999999999988776432211
Q ss_pred -------------eEEEEEeCCCCCEEEEEeCCC-------------------eEEEEEcccCCceeEEEecCC------
Q 038802 181 -------------VRCGDCSPVNGDMFVTGSYDH-------------------TVKLWDVRVENSKSVMEVNHG------ 222 (532)
Q Consensus 181 -------------v~~i~~~~~~~~~l~s~s~dg-------------------~i~iwd~~~~~~~~~~~~~~~------ 222 (532)
...++++| +++.++.++.++ .|..+|.++++..-.+...+.
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~ 310 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYT 310 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC
T ss_pred cCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccc
Confidence 12467888 778888877664 599999998776655554321
Q ss_pred --CcEEEEEEecCC---CEEEEEc-CCeEEEEEccCCCeeeEEccCCC-----------cce------------------
Q 038802 223 --KPIEDVMFLPSG---GLIATAG-GNSVKIWDLIGGGKMVYSMESHN-----------KTV------------------ 267 (532)
Q Consensus 223 --~~v~~i~~~~~~---~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~-----------~~i------------------ 267 (532)
....-+....+| ..++.++ +|.++++|..++ +.+....... ..+
T Consensus 311 ~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG-~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~ 389 (677)
T 1kb0_A 311 STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNG-KFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGP 389 (677)
T ss_dssp CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTC-CEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCT
T ss_pred cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCC-CEeccccccccCcccccCCCCceeeccccCcCCCccEECcCc
Confidence 122223344467 5777777 899999999887 5554433111 011
Q ss_pred ------EEEEEeccCCCCCccccccEEEEEec-------------------------------------------CCeEE
Q 038802 268 ------TSVCVGRVGNESGEEAMQYRILSVAL-------------------------------------------DGYMK 298 (532)
Q Consensus 268 ------~~~~~~~~~~~~~~~~~~~~l~s~~~-------------------------------------------dg~i~ 298 (532)
..++++|+ ..++++... .|.|.
T Consensus 390 ~G~~~w~~~a~dp~---------~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~ 460 (677)
T 1kb0_A 390 YGAHNWHPMSFNPQ---------TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLL 460 (677)
T ss_dssp TCSSCSSCCEEETT---------TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEE
T ss_pred ccccCCCCceEcCC---------CCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEE
Confidence 13455655 345555432 27899
Q ss_pred EEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 299 VFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 299 iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
.||+.+++.+..+.+..++.+..+..++..+++|+.||.+++||..+++.+
T Consensus 461 A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 461 AWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp EEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred EEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCcee
Confidence 999999999999988777777778888899999999999999999998765
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.43 E-value=5.2e-10 Score=106.34 Aligned_cols=221 Identities=12% Similarity=0.037 Sum_probs=147.7
Q ss_pred eEEEEEccCC-CEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec
Q 038802 96 VTCSSFRPDG-SLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL 174 (532)
Q Consensus 96 v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 174 (532)
..+..|+|++ .+++++..++.|..||..+++.. .+. ....+.+++|++ ++.++++ +.+ .|.+||..+++.....
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~-dg~l~v~-~~~-gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKIS-DSKQLIA-SDD-GLFLRDTATGVLTLHA 125 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEE-TTEEEEE-ETT-EEEEEETTTCCEEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeC-CCeEEEE-ECC-CEEEEECCCCcEEEEe
Confidence 4567899974 55667777889999999876543 333 346799999998 7776665 444 4999999887754322
Q ss_pred cC----CCCceEEEEEeCCCCCEEEEEeC------CCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc--C
Q 038802 175 FG----HKDYVRCGDCSPVNGDMFVTGSY------DHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG--G 242 (532)
Q Consensus 175 ~~----~~~~v~~i~~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d 242 (532)
.. ....+.+++++| +++++++... .+.|..+| +++ ..... ........++|+|+++.++.+. +
T Consensus 126 ~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~-~~~~~-~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGK-VTKLF-ADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp CSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTE-EEEEE-EEESSEEEEEECTTSCEEEEEETTT
T ss_pred eCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCc-EEEee-CCCcccCCeEEcCCCCEEEEEECCC
Confidence 21 124588999999 8887765542 24555555 322 22221 2334567899999998665554 6
Q ss_pred CeEEEEEcc--CC-C----eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecC-
Q 038802 243 NSVKIWDLI--GG-G----KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFP- 314 (532)
Q Consensus 243 ~~i~iwd~~--~~-~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~- 314 (532)
+.|.+||+. ++ . .....+.........+++.++ +.+.++...++.|.+||. +++.+..+..+
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~---------G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~ 270 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAE---------GHIWNARWGEGAVDRYDT-DGNHIARYEVPG 270 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTT---------SCEEEEEETTTEEEEECT-TCCEEEEEECSC
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCC---------CCEEEEEeCCCEEEEECC-CCCEEEEEECCC
Confidence 799999985 33 1 223333334456678888887 455665556788999998 56777777644
Q ss_pred CCeeEEEEe-cCCCEEEEEecCC
Q 038802 315 APLMSVAFS-PDCMTRVIGTSNG 336 (532)
Q Consensus 315 ~~v~~~~~s-~~~~~l~~g~~dg 336 (532)
..+++++|+ ++++.|++++..+
T Consensus 271 ~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 271 KQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp SBEEEEEEESTTSCEEEEEEBCT
T ss_pred CCcEEEEEecCCCCEEEEEecCC
Confidence 468999998 8888776665543
No 218
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.43 E-value=5.9e-11 Score=124.23 Aligned_cols=271 Identities=10% Similarity=0.057 Sum_probs=181.9
Q ss_pred CCeEEEEEeCCeEEEEeCCCceEEEEeeccCce----------e-EEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEe
Q 038802 63 TSHLFAATHSASLTLFSSQTLEKHSAISSFKDV----------V-TCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRL 131 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 131 (532)
+..+++++.++.|.-+|..+|+.+..+...... + ..+.+ ++..+++++.|+.|..+|..+|+.+..+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 557888888899999999999998887543221 0 11222 4567888889999999999999988776
Q ss_pred cCC--CC---CEEE-EEeecCCCcEEEEEe------CCCeEEEEECCCCeEEEeccCCC---------------------
Q 038802 132 KSH--TR---PVRF-VKYPFLDKLHLVSGG------DDGIVKFWDVAGESVVLDLFGHK--------------------- 178 (532)
Q Consensus 132 ~~h--~~---~i~~-~~~~~~~~~~l~s~s------~dg~i~iwd~~~~~~~~~~~~~~--------------------- 178 (532)
... .. .+.+ .... ++. +++++ .+|.|..||..+|+.+..+....
T Consensus 148 ~~~~~~~~~~~~~~sP~v~--~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 224 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVV--NGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFG 224 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEE--TTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCS
T ss_pred cCcCCCCCCccccCCcEEE--CCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCC
Confidence 542 11 1110 1111 444 44443 37899999999999887664210
Q ss_pred ----------CceEEEEEeCCCCCEEEEEeCCCe-------------------EEEEEcccCCceeEEEec-CC------
Q 038802 179 ----------DYVRCGDCSPVNGDMFVTGSYDHT-------------------VKLWDVRVENSKSVMEVN-HG------ 222 (532)
Q Consensus 179 ----------~~v~~i~~~~~~~~~l~s~s~dg~-------------------i~iwd~~~~~~~~~~~~~-~~------ 222 (532)
.....+++.| +.+.++.++.++. |..+|.++++..-.+... |.
T Consensus 225 ~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~ 303 (689)
T 1yiq_A 225 DAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTA 303 (689)
T ss_dssp STHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCC
T ss_pred ceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccC
Confidence 0112567888 7788888888764 999999998766555432 21
Q ss_pred -CcEEEEEEecCCC---EEEEEc-CCeEEEEEccCCCeeeEEccCCC-cce-----------------------------
Q 038802 223 -KPIEDVMFLPSGG---LIATAG-GNSVKIWDLIGGGKMVYSMESHN-KTV----------------------------- 267 (532)
Q Consensus 223 -~~v~~i~~~~~~~---~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~-~~i----------------------------- 267 (532)
.+........+|+ .++.++ +|.++++|..++ +++....... ...
T Consensus 304 ~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG-~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~ 382 (689)
T 1yiq_A 304 TQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATG-ELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVT 382 (689)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC-CEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEES
T ss_pred CCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCC-CEeccccccccccccccCccCCCcccchhhccccCCCCeeEeC
Confidence 1222223333565 677777 899999999887 4442221100 000
Q ss_pred ---------EEEEEeccCCCCCccccccEEEEEec---------------------------------------------
Q 038802 268 ---------TSVCVGRVGNESGEEAMQYRILSVAL--------------------------------------------- 293 (532)
Q Consensus 268 ---------~~~~~~~~~~~~~~~~~~~~l~s~~~--------------------------------------------- 293 (532)
..++++|+ ..++++...
T Consensus 383 p~~~Gg~~w~~~a~dp~---------~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~ 453 (689)
T 1yiq_A 383 PAFWGAHDWQPMSYNPD---------TGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSW 453 (689)
T ss_dssp SCTTCSSCSSCCEEETT---------TTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTC
T ss_pred CCcccccCCCcceECCC---------CCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCc
Confidence 11455554 334444321
Q ss_pred CCeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 294 DGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 294 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+|.|..||+.+++.+..+++..++..-.+...+..+++|+.||.|+.||..+++.+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 48899999999999999887777766677788889999999999999999999876
No 219
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.43 E-value=2.8e-10 Score=110.61 Aligned_cols=264 Identities=12% Similarity=0.066 Sum_probs=172.2
Q ss_pred CCeEEEEEeCCeEEEEeCCCceEEEEeeccC---------ceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecC
Q 038802 63 TSHLFAATHSASLTLFSSQTLEKHSAISSFK---------DVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKS 133 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 133 (532)
+..+++++.++.|..+|..+++......... ..+.+. ...++..+++++.++.|..+|..+++.+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 5578888889999999999999877665421 222222 222456788888899999999999998877664
Q ss_pred CCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCce-----EEEEEeCCCCCEEEEEeCCCeEEEEEc
Q 038802 134 HTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYV-----RCGDCSPVNGDMFVTGSYDHTVKLWDV 208 (532)
Q Consensus 134 h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v-----~~i~~~~~~~~~l~s~s~dg~i~iwd~ 208 (532)
.......... .+..++.++.++.|..+|..+++.+..+....... ..... .+..++.++.++.+..+|.
T Consensus 132 ~~~~~~~p~~---~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~---~~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 132 AGEALSRPVV---SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT---AFGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp SSCCCSCCEE---ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE---ETTEEEECCTTTEEEEEET
T ss_pred CCceEcCCEE---ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE---ECCEEEEEcCCCEEEEEEC
Confidence 4322222222 23468888899999999999999887765432211 12222 2456888888999999999
Q ss_pred ccCCceeEEEecCCCc---------EEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCC
Q 038802 209 RVENSKSVMEVNHGKP---------IEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNES 279 (532)
Q Consensus 209 ~~~~~~~~~~~~~~~~---------v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 279 (532)
.+++..-......... +.......++.+++.+.++.+..+|..++ +.+..... .....+...
T Consensus 206 ~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG-~~~w~~~~--~~~~~~~~~------ 276 (376)
T 3q7m_A 206 EQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSG-QIMWKREL--GSVNDFIVD------ 276 (376)
T ss_dssp TTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTC-CEEEEECC--CCEEEEEEE------
T ss_pred CCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCC-cEEeeccC--CCCCCceEE------
Confidence 8866554443221100 10110111344444444899999999887 55544432 223344433
Q ss_pred CccccccEEEEEecCCeEEEEECCCceEEEeee-cC-CCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 280 GEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FP-APLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 280 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~-~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+..++.++.+|.|..+|..+++...... .. ..+..... .+..+++++.+|.|+++|..+++..
T Consensus 277 -----~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 277 -----GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp -----TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred -----CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEE
Confidence 3568888889999999999999887765 22 22233333 2568889999999999999887654
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.43 E-value=2.9e-15 Score=145.25 Aligned_cols=259 Identities=15% Similarity=0.112 Sum_probs=145.0
Q ss_pred CCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCC-EE-
Q 038802 62 TTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRP-VR- 139 (532)
Q Consensus 62 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~-i~- 139 (532)
++..+++++.||.|+.||..+|+....+.. +.+.+..+..++..+++++.||.|+.||..+++.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 466899999999999999999999888876 45555556678888888889999999999998887766543210 00
Q ss_pred EEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEe
Q 038802 140 FVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEV 219 (532)
Q Consensus 140 ~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 219 (532)
+..+. .+..+++++.|+.|+.||..+|+.+..+..+. ...++| ++..+++++.|+.|+.||.++++..-....
T Consensus 86 sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 86 SPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSP-STSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp CSCC-------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred CceEe--cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccc-cCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 00111 34467888899999999999999888776543 234567 778899999999999999998765544332
Q ss_pred cCCCcEEEEEEecC----CCEEEEEcCCeEEEEEccCCCeeeEEccCCCcceEE-EEEeccCCCCCccccccEEEE--Ee
Q 038802 220 NHGKPIEDVMFLPS----GGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTS-VCVGRVGNESGEEAMQYRILS--VA 292 (532)
Q Consensus 220 ~~~~~v~~i~~~~~----~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~l~s--~~ 292 (532)
.. .....+.++ +.+++++.+|.+..||..++ +.+...... .++.. ..+++++ ...+. ..
T Consensus 159 ~~---~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG-~~~W~~~~~-~pv~~~~~~~~dg---------~~~v~~~~~ 224 (369)
T 2hz6_A 159 FD---YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG-DVLWIQNYA-SPVVAFYVWQREG---------LRKVMHINV 224 (369)
T ss_dssp EE---ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC-CEEEEEECS-SCEEEEEECTTSS---------CEEECCEEE
T ss_pred cc---ccCccccCCccccceEEEECCCCEEEEEECCCC-cEEEEecCC-CceEEEEEecCCc---------eEeccceee
Confidence 11 122233332 45555555999999999887 556555433 33333 3333332 11100 01
Q ss_pred cCCeEEEEECCCce----EEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeecC
Q 038802 293 LDGYMKVFDYGKMK----VTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKK 345 (532)
Q Consensus 293 ~dg~i~iwd~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~ 345 (532)
.++.++.+|..+++ .+..+...+.+. ...-.+..+++++.+|.++.++...
T Consensus 225 ~~~~l~~ld~~tG~~~~~~~W~~~~~~~~~--sp~~~~g~lyv~~~~G~l~al~~~~ 279 (369)
T 2hz6_A 225 AVETLRYLTFMSGEVGRITKWKYPFPKETE--AKSKLTPTLYVGKYSTSLYASPSMV 279 (369)
T ss_dssp EHHHHHHHHHHHHHHHHHHTSCCCCCCHHH--HHHHSEEEECBEECSSCEECCEEEE
T ss_pred cccceeeeehhcCCcccceeeeeccCcccc--ccccccceEEEecccCCEEecCccc
Confidence 14456666766665 444443333332 1111346788999999999998874
No 221
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=3.6e-12 Score=122.15 Aligned_cols=164 Identities=15% Similarity=0.064 Sum_probs=125.8
Q ss_pred eeEEEEEccCCCEEEEEcCCCCEEEEECCCCc-----------eEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEE
Q 038802 95 VVTCSSFRPDGSLLAASDLSGLIQVFDVKSRT-----------PLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFW 163 (532)
Q Consensus 95 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~-----------~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iw 163 (532)
.++.+++++...++++|+.++ +.+|++++.. ..... .+.+ |+.++| ++..|+++ .++.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f---d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF---HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE---ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE---CCCEEEEE-cCCcEEEE
Confidence 689999999999999999875 6669865332 11222 3566 999999 67788888 88999999
Q ss_pred ECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEcCC
Q 038802 164 DVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGN 243 (532)
Q Consensus 164 d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~ 243 (532)
|+.+.........|...+.++.+.+ . .+++++.||.+.+||+.++.... +...|.|++|+|+| ..+.+.||
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~-p--~~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG-~~vg~~dg 182 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVN-N--TLVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQ-LAVLLKDR 182 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECS-S--EEEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSE-EEEEETTS
T ss_pred EchhhhccCccceeecceeeEEecC-C--CEEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCc-eEEEEcCC
Confidence 9987665555666777888887765 2 38889999999999998755432 34589999999999 55555599
Q ss_pred eEEEEEccCCCee--eEEc------c---CCCcceEEEEEecc
Q 038802 244 SVKIWDLIGGGKM--VYSM------E---SHNKTVTSVCVGRV 275 (532)
Q Consensus 244 ~i~iwd~~~~~~~--~~~~------~---~~~~~i~~~~~~~~ 275 (532)
.+++|+.... .. ..++ . +|...|.+++|.++
T Consensus 183 ~i~~~~~~~~-~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 183 SFQSFAWRNG-EMEKQFEFSLPSELEELPVEEYSPLSVTILSP 224 (388)
T ss_dssp CEEEEEEETT-EEEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred cEEEEcCCCc-cccccceecCCcccccccCCCeeEEEEEEecC
Confidence 9999998766 43 4444 2 47889999999987
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.42 E-value=7.6e-12 Score=119.64 Aligned_cols=246 Identities=11% Similarity=-0.024 Sum_probs=168.5
Q ss_pred EEEEcCCCCeEEEEE----------eCCeEEEEeCCCceEEEEeecc-------CceeEEEEEccCCCEEEEEcC--CCC
Q 038802 56 SIVFSPTTSHLFAAT----------HSASLTLFSSQTLEKHSAISSF-------KDVVTCSSFRPDGSLLAASDL--SGL 116 (532)
Q Consensus 56 ~i~~sp~~~~l~~~~----------~d~~v~i~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~g~~--dg~ 116 (532)
.+.|+||+++++++. .++.|.+||..+++.+.++... ......++|+|||++++++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 799999999999887 3689999999999999998654 134567899999999998864 456
Q ss_pred EEE--EECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCC-----CeEEE----eccCCCCceEEEE
Q 038802 117 IQV--FDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAG-----ESVVL----DLFGHKDYVRCGD 185 (532)
Q Consensus 117 i~i--wd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~-----~~~~~----~~~~~~~~v~~i~ 185 (532)
+.+ +|..+ +..+... +. ....|.....+++.+.||.+.+.|+.+ ++... .+.....+. .
T Consensus 149 v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~ 218 (368)
T 1mda_H 149 AGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q 218 (368)
T ss_dssp EEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E
T ss_pred EEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c
Confidence 888 88876 4444321 11 123342445566777889988899886 43221 111122333 3
Q ss_pred EeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEec--------C---CCcEEEEEEecCCCEEEEE-c-C--------Ce
Q 038802 186 CSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVN--------H---GKPIEDVMFLPSGGLIATA-G-G--------NS 244 (532)
Q Consensus 186 ~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--------~---~~~v~~i~~~~~~~~l~~~-~-d--------~~ 244 (532)
.+ ++..++..+. +.+.+.|............. + ......+.++|+++.++.+ . . +.
T Consensus 219 -~~-~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~ 295 (368)
T 1mda_H 219 -AN-YPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAEN 295 (368)
T ss_dssp -ET-TTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEE
T ss_pred -cc-cCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCC
Confidence 55 5566666666 89999998653222111110 0 1112226899998877654 2 2 35
Q ss_pred EEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEe-cCCeEEEEECCCceEEEeeecCCCeeEEEEe
Q 038802 245 VKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVA-LDGYMKVFDYGKMKVTHSMRFPAPLMSVAFS 323 (532)
Q Consensus 245 i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s 323 (532)
+.++|+.+. +.+..+.... ....+.++|++ ...+++.. .++.|.++|+.+++.+.++........+++.
T Consensus 296 ~~ViD~~t~-~vv~~i~vg~-~p~gi~~s~Dg--------~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~ 365 (368)
T 1mda_H 296 TSSVTASVG-QTSGPISNGH-DSDAIIAAQDG--------ASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQ 365 (368)
T ss_dssp EEEEESSSC-CEEECCEEEE-EECEEEECCSS--------SCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECC
T ss_pred EEEEECCCC-eEEEEEECCC-CcceEEECCCC--------CEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEee
Confidence 679999887 6677665433 57899999995 34677777 5999999999999999999877777888776
Q ss_pred c
Q 038802 324 P 324 (532)
Q Consensus 324 ~ 324 (532)
+
T Consensus 366 ~ 366 (368)
T 1mda_H 366 N 366 (368)
T ss_dssp C
T ss_pred c
Confidence 5
No 223
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.42 E-value=7.4e-12 Score=119.73 Aligned_cols=252 Identities=9% Similarity=-0.039 Sum_probs=170.7
Q ss_pred eEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEc----------CCCCEEEEECCCCceEEEecCC-------CC
Q 038802 74 SLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASD----------LSGLIQVFDVKSRTPLRRLKSH-------TR 136 (532)
Q Consensus 74 ~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~----------~dg~i~iwd~~~~~~~~~~~~h-------~~ 136 (532)
.|.++|..+++.+.++.....+ .+.++||+++++++. .++.|.+||..+++.+.++..+ ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8999999999999999776666 799999999999886 3688999999999999887633 12
Q ss_pred CEEEEEeecCCCcEEEEEeC--CCeEEE--EECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEccc--
Q 038802 137 PVRFVKYPFLDKLHLVSGGD--DGIVKF--WDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRV-- 210 (532)
Q Consensus 137 ~i~~~~~~~~~~~~l~s~s~--dg~i~i--wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~-- 210 (532)
....+.++| ++++++++.. +..|.+ +|..+ +..+... +. ..+.|.....+++.+.||.+.+.|+.+
T Consensus 125 ~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~ 196 (368)
T 1mda_H 125 RVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAP 196 (368)
T ss_dssp CTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSC
T ss_pred CcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECcccc
Confidence 345789999 8888888864 467888 99876 3333211 11 223342345666777888888888875
Q ss_pred ---CCcee----EEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCC-eeeEEccCC-------C---cceEEEEE
Q 038802 211 ---ENSKS----VMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGG-KMVYSMESH-------N---KTVTSVCV 272 (532)
Q Consensus 211 ---~~~~~----~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~-~~~~~~~~~-------~---~~i~~~~~ 272 (532)
++... .... ...+. .+..++.++++.. +.+.+.|+.+.. ..+..+... . .....+.+
T Consensus 197 ~~~~~v~~~~t~~i~v-g~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~ 271 (368)
T 1mda_H 197 AAAGIVGAQCTGAQNC-SSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAK 271 (368)
T ss_dssp CCCEECCCCSCTTSCB-CSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEE
T ss_pred ccCCeEEEEeeeeeeC-CCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEE
Confidence 21110 1111 12333 3333444555555 899999986532 222222110 0 11112679
Q ss_pred eccCCCCCccccccEEEEE-e---c-----CCeEEEEECCCceEEEeeecCCCeeEEEEecCCCE-EEEEe-cCCcEEEE
Q 038802 273 GRVGNESGEEAMQYRILSV-A---L-----DGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMT-RVIGT-SNGTIFAG 341 (532)
Q Consensus 273 ~~~~~~~~~~~~~~~l~s~-~---~-----dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~g~-~dg~i~iw 341 (532)
++++ ..++.+ . . ++.+.++|+.+++.+..+.......+++|+|||+. +++.. .++.|.++
T Consensus 272 s~dg---------~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVI 342 (368)
T 1mda_H 272 LKNT---------DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIY 342 (368)
T ss_dssp ETTT---------TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred cCCC---------CEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEE
Confidence 9984 445443 3 1 23566999999999999987778999999999984 55555 58999999
Q ss_pred eecCcccc
Q 038802 342 RRKKKENV 349 (532)
Q Consensus 342 ~~~~~~~~ 349 (532)
|..+.+..
T Consensus 343 D~~t~kvv 350 (368)
T 1mda_H 343 DAASDQDQ 350 (368)
T ss_dssp ESSSCEEE
T ss_pred ECCCCcEE
Confidence 99998765
No 224
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.41 E-value=3.8e-11 Score=126.52 Aligned_cols=243 Identities=10% Similarity=0.051 Sum_probs=158.1
Q ss_pred CccccCeeEEEEcCCCCeEEEEEeC-----CeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCC------
Q 038802 48 PGLVSSINSIVFSPTTSHLFAATHS-----ASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGL------ 116 (532)
Q Consensus 48 ~~h~~~V~~i~~sp~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~------ 116 (532)
.+|...+..++|||||+++|.+... ..|++||+.+++..... .+......++|+ ||+.|+.++.+..
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCccccccc
Confidence 3466689999999999988865432 47999999998865431 111113577899 9999998877743
Q ss_pred -------EEEEECCCCce----EEEecC-CCCCEEEEEeecCCCcEEEEEeC----CCeEEEEECCCCe-EEEeccCCCC
Q 038802 117 -------IQVFDVKSRTP----LRRLKS-HTRPVRFVKYPFLDKLHLVSGGD----DGIVKFWDVAGES-VVLDLFGHKD 179 (532)
Q Consensus 117 -------i~iwd~~~~~~----~~~~~~-h~~~i~~~~~~~~~~~~l~s~s~----dg~i~iwd~~~~~-~~~~~~~~~~ 179 (532)
|++|++.++.. +..... |...+..+.|+| ++.+|+..+. ++.|+++|+.++. ....+..+.+
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~ 281 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD 281 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC
Confidence 99999987642 222233 455678899999 7776654332 3589999997763 3344555555
Q ss_pred ceEEEEEeCCCCC-EEEEEeCC---CeEEEEEcccCCce--eEEEecCCCcEEEEEEecCCCEEEEEc--CC--eEEEEE
Q 038802 180 YVRCGDCSPVNGD-MFVTGSYD---HTVKLWDVRVENSK--SVMEVNHGKPIEDVMFLPSGGLIATAG--GN--SVKIWD 249 (532)
Q Consensus 180 ~v~~i~~~~~~~~-~l~s~s~d---g~i~iwd~~~~~~~--~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~--~i~iwd 249 (532)
..... +++ ++. +++.+..+ +.|..+|+.++... ..+ ..+...+. .|+++++.|+... ++ .|++||
T Consensus 282 ~~~~~-~~~-~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 282 ADVSL-VDN-KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDL-IPERQQVL--TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp SCEEE-EEE-ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE-ECCCSSCE--EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred ceEEE-Eec-cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEE-ecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEE
Confidence 55554 555 444 44444443 57999999875441 222 34555554 8899888877765 44 689999
Q ss_pred ccCCCeeeEEcc-CCCcceEEEEEeccCCCCCccccccEEEEEec---CCeEEEEECCCceEE
Q 038802 250 LIGGGKMVYSME-SHNKTVTSVCVGRVGNESGEEAMQYRILSVAL---DGYMKVFDYGKMKVT 308 (532)
Q Consensus 250 ~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~ 308 (532)
+..+ . ...+. ...+.+..+.+++++ ..++++.+. -+.+..||+.+++..
T Consensus 357 ~~g~-~-~~~l~~p~~~~~~~~~~~~d~--------~~l~~~~ss~~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 357 YEGK-R-VREVALPGLGSVSGFNGKHDD--------PALYFGFENYAQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp TTSC-E-EEEECCSSSSEEEECCCCTTC--------SCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred CCCC-e-eEEeecCCCceEEeeecCCCC--------CEEEEEecCCCCCCEEEEEECCCCeEE
Confidence 8744 3 33332 344567777777764 334444332 278999999887643
No 225
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.41 E-value=5e-11 Score=112.31 Aligned_cols=234 Identities=9% Similarity=-0.002 Sum_probs=155.5
Q ss_pred CccCccccCeeEEEEcCCCC-eEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECC
Q 038802 45 HQIPGLVSSINSIVFSPTTS-HLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVK 123 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 123 (532)
..+...........|+|+++ .+++...++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|+..
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 33444556678899999998 4555556789999997 444 34455566788999999999977776666789999986
Q ss_pred CCceEEEec---C-CCCCEEEEEeecCCCcEEEE----EeC-------------CCeEEEEECCCCeEEEeccCCCCceE
Q 038802 124 SRTPLRRLK---S-HTRPVRFVKYPFLDKLHLVS----GGD-------------DGIVKFWDVAGESVVLDLFGHKDYVR 182 (532)
Q Consensus 124 ~~~~~~~~~---~-h~~~i~~~~~~~~~~~~l~s----~s~-------------dg~i~iwd~~~~~~~~~~~~~~~~v~ 182 (532)
++...... + ....+.++++++ ++.+.++ |.. .+.|..||..+++..... ......
T Consensus 116 -g~~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~ 191 (305)
T 3dr2_A 116 -GQAHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPN 191 (305)
T ss_dssp -SCEEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEE
T ss_pred -CCEEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCc
Confidence 54322221 1 113466799998 8887776 332 356888888666544333 334567
Q ss_pred EEEEeCCCCCEEEEEeCC------CeEEEEEcccCCce--eEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCC
Q 038802 183 CGDCSPVNGDMFVTGSYD------HTVKLWDVRVENSK--SVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGG 254 (532)
Q Consensus 183 ~i~~~~~~~~~l~s~s~d------g~i~iwd~~~~~~~--~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~ 254 (532)
.++|+| +++.|+.+... +.|.+||+...... ..+..........++++++|++.++. .+.|.+||.. +
T Consensus 192 gl~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~gv~~~~~~-g- 267 (305)
T 3dr2_A 192 GLAFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTGVCVFDSD-G- 267 (305)
T ss_dssp EEEECT-TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SSEEEEECTT-S-
T ss_pred ceEEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CCcEEEECCC-C-
Confidence 899999 88877776654 68999998753211 11111123345678999999965554 4459999974 3
Q ss_pred eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEE
Q 038802 255 KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMK 298 (532)
Q Consensus 255 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~ 298 (532)
+.+..+..+. .+.+++|+++ +..|+.++.++..+
T Consensus 268 ~~~~~~~~~~-~~~~~~f~~d---------~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 268 QLLGHIPTPG-TASNCTFDQA---------QQRLFITGGPCLWM 301 (305)
T ss_dssp CEEEEEECSS-CCCEEEECTT---------SCEEEEEETTEEEE
T ss_pred CEEEEEECCC-ceeEEEEeCC---------CCEEEEEcCCeEEE
Confidence 5555555444 5888999977 45666666654333
No 226
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.38 E-value=2.6e-10 Score=110.92 Aligned_cols=258 Identities=11% Similarity=0.123 Sum_probs=166.9
Q ss_pred CCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCE----
Q 038802 63 TSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPV---- 138 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i---- 138 (532)
+..+++++.++.|..+|..+++................. .+..+++++.++.|..+|..+++.+..+.......
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 457888888999999999999988776554322111222 24478888889999999999999887776432211
Q ss_pred -EEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCc-------eEEEEEeC-CCCCEEEEEeCCCeEEEEEcc
Q 038802 139 -RFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDY-------VRCGDCSP-VNGDMFVTGSYDHTVKLWDVR 209 (532)
Q Consensus 139 -~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-------v~~i~~~~-~~~~~l~s~s~dg~i~iwd~~ 209 (532)
..... .+..++.++.++.+..+|..+++.+......... +..+...| ..+..++.++.++.+..+|.+
T Consensus 181 ~~~~~~---~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~ 257 (376)
T 3q7m_A 181 ESAPTT---AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLR 257 (376)
T ss_dssp CCCCEE---ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETT
T ss_pred CCCcEE---ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECC
Confidence 11222 2346788888999999999999887766432110 00000111 024677888889999999998
Q ss_pred cCCceeEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEcc-CCCcceEEEEEeccCCCCCccccccEE
Q 038802 210 VENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSME-SHNKTVTSVCVGRVGNESGEEAMQYRI 288 (532)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~l 288 (532)
+++..-... ......+... ++.++++..++.+..+|..++ +...... .....+...... +..+
T Consensus 258 tG~~~w~~~---~~~~~~~~~~-~~~l~~~~~~g~l~~~d~~tG-~~~w~~~~~~~~~~~~~~~~-----------~~~l 321 (376)
T 3q7m_A 258 SGQIMWKRE---LGSVNDFIVD-GNRIYLVDQNDRVMALTIDGG-VTLWTQSDLLHRLLTSPVLY-----------NGNL 321 (376)
T ss_dssp TCCEEEEEC---CCCEEEEEEE-TTEEEEEETTCCEEEEETTTC-CEEEEECTTTTSCCCCCEEE-----------TTEE
T ss_pred CCcEEeecc---CCCCCCceEE-CCEEEEEcCCCeEEEEECCCC-cEEEeecccCCCcccCCEEE-----------CCEE
Confidence 865443322 2233444443 444444445889999999887 5554443 222222233332 3578
Q ss_pred EEEecCCeEEEEECCCceEEEeeec-CCCeeEEEEecCCCEEEEEecCCcEEEEe
Q 038802 289 LSVALDGYMKVFDYGKMKVTHSMRF-PAPLMSVAFSPDCMTRVIGTSNGTIFAGR 342 (532)
Q Consensus 289 ~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~g~~dg~i~iw~ 342 (532)
+.++.+|.|.++|..+++.+..... ...+.+.... .+..|++++.+|.|+.|+
T Consensus 322 ~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~-~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 322 VVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA-ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE-ETTEEEEEBTTSCEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE-ECCEEEEEeCCCEEEEEe
Confidence 8899999999999999999887775 3343322112 246788899999999986
No 227
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.37 E-value=9e-11 Score=123.65 Aligned_cols=240 Identities=15% Similarity=0.121 Sum_probs=154.4
Q ss_pred cCceeEEEEEccCCCEEEEE-----cCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCC--------
Q 038802 92 FKDVVTCSSFRPDGSLLAAS-----DLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDG-------- 158 (532)
Q Consensus 92 ~~~~v~~~~~~~~~~~l~~g-----~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg-------- 158 (532)
+...+..++|||||++||.+ +....|++||+.+++.+.... +......++|+ |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws--Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL--GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE--TTTEEEEEESSCCC------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe--CCCEEEEEEecCcccccccc
Confidence 44578889999999999843 223579999999998654311 11112456788 566677777663
Q ss_pred -----eEEEEECCCCe----EEEeccC-CCCceEEEEEeCCCCCEEEEEeC----CCeEEEEEcccCCceeEEEecCCCc
Q 038802 159 -----IVKFWDVAGES----VVLDLFG-HKDYVRCGDCSPVNGDMFVTGSY----DHTVKLWDVRVENSKSVMEVNHGKP 224 (532)
Q Consensus 159 -----~i~iwd~~~~~----~~~~~~~-~~~~v~~i~~~~~~~~~l~s~s~----dg~i~iwd~~~~~~~~~~~~~~~~~ 224 (532)
.|++|++.++. .+..... |...+.++.++| ++++++.... +..|+++|+.++.........+...
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 49999997754 3433344 455678899999 8887755433 2489999998764332222344444
Q ss_pred EEEEEEecCCCE-EEEEc-C---CeEEEEEccCCCe-eeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCC--e
Q 038802 225 IEDVMFLPSGGL-IATAG-G---NSVKIWDLIGGGK-MVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDG--Y 296 (532)
Q Consensus 225 v~~i~~~~~~~~-l~~~~-d---~~i~iwd~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg--~ 296 (532)
.... ++++|.. ++.+. + +.|..+|+.++.. ....+..|...+. .|++++ ..++++...+| .
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g--------~~lv~~~~~~g~~~ 351 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGS--------GYLFAEYMVDATAR 351 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEET--------TEEEEEEEETTEEE
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEEC--------CEEEEEEEECCeeE
Confidence 4444 5565554 44443 3 5799999877532 1234455655554 888884 33444444555 6
Q ss_pred EEEEECCCceEEEeee--cCCCeeEEEEecCCCEEEEEecC----CcEEEEeecCcc
Q 038802 297 MKVFDYGKMKVTHSMR--FPAPLMSVAFSPDCMTRVIGTSN----GTIFAGRRKKKE 347 (532)
Q Consensus 297 i~iwd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~g~~d----g~i~iw~~~~~~ 347 (532)
|++||+..+.. ..+. ..+.+..+.+++++..++....+ +.|+.|++.+++
T Consensus 352 l~~~d~~g~~~-~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 352 VEQFDYEGKRV-REVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEECTTSCEE-EEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEEECCCCee-EEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 89999886543 4444 33457777888888877766555 789999987764
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.35 E-value=9.6e-10 Score=104.51 Aligned_cols=212 Identities=12% Similarity=0.028 Sum_probs=143.3
Q ss_pred eeEEEEcCCCCeE-EEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEec
Q 038802 54 INSIVFSPTTSHL-FAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLK 132 (532)
Q Consensus 54 V~~i~~sp~~~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 132 (532)
..+..|+|++..+ ++...++.|..||..+++.. .+. ....+.+++|+++|+++++. .+| |.+||..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~g-l~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DDG-LFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TTE-EEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CCC-EEEEECCCCcEEEEee
Confidence 4578999986544 45556789999999877543 232 35679999999999877765 344 9999998876543322
Q ss_pred C---C-CCCEEEEEeecCCCcEEEEEeC------CCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEE-EEeCCC
Q 038802 133 S---H-TRPVRFVKYPFLDKLHLVSGGD------DGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFV-TGSYDH 201 (532)
Q Consensus 133 ~---h-~~~i~~~~~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~-s~s~dg 201 (532)
. . ...+.+++++| ++.++++... .+.|..++ +++... +..+......++|+| +++.++ +.+.++
T Consensus 127 ~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~-dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSP-DGTTGYFVDTKVN 201 (326)
T ss_dssp SSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECT-TSCEEEEEETTTC
T ss_pred CCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcC-CCCEEEEEECCCC
Confidence 1 1 23588999999 7776655432 25666677 455432 222334567899999 887654 445678
Q ss_pred eEEEEEcc--cC-Cce--eEE-Ee-cCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEe
Q 038802 202 TVKLWDVR--VE-NSK--SVM-EV-NHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVG 273 (532)
Q Consensus 202 ~i~iwd~~--~~-~~~--~~~-~~-~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~ 273 (532)
.|.+||+. ++ ... ..+ .. ........++++++|.+.++.. ++.|.+||. ++ +.+..+..+...+++++|+
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g-~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DG-NHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TC-CEEEEEECSCSBEEEEEEE
T ss_pred EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CC-CEEEEEECCCCCcEEEEEe
Confidence 99999986 43 211 122 21 1345678899999998777765 689999997 44 5566666666779999998
Q ss_pred -ccC
Q 038802 274 -RVG 276 (532)
Q Consensus 274 -~~~ 276 (532)
+++
T Consensus 280 g~d~ 283 (326)
T 2ghs_A 280 GPDA 283 (326)
T ss_dssp STTS
T ss_pred cCCC
Confidence 663
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.35 E-value=5e-10 Score=116.99 Aligned_cols=255 Identities=13% Similarity=0.118 Sum_probs=172.5
Q ss_pred CCeEEEEEeCCeEEEEeCCCceEEEEeecc-C----ceeEEEEEccCCCEEEEEcC------CCCEEEEECCCCceEEEe
Q 038802 63 TSHLFAATHSASLTLFSSQTLEKHSAISSF-K----DVVTCSSFRPDGSLLAASDL------SGLIQVFDVKSRTPLRRL 131 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~l~~g~~------dg~i~iwd~~~~~~~~~~ 131 (532)
+..+++++.|+.|..+|..+|+.+..+..+ . ..+.+.-.- .+..+++++. +|.|+.||..+++.+..+
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 457888888999999999999998887654 1 122211111 2345555543 689999999999988877
Q ss_pred cCCCCC--------------------------------EEEEEeecCCCcEEEEEeCCC-------------------eE
Q 038802 132 KSHTRP--------------------------------VRFVKYPFLDKLHLVSGGDDG-------------------IV 160 (532)
Q Consensus 132 ~~h~~~--------------------------------i~~~~~~~~~~~~l~s~s~dg-------------------~i 160 (532)
...... ...++++| +...++.++.++ .|
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 542211 12467888 677788877664 59
Q ss_pred EEEECCCCeEEEeccC--CC-------CceEEEEEeCCCC---CEEEEEeCCCeEEEEEcccCCceeEEEecC-------
Q 038802 161 KFWDVAGESVVLDLFG--HK-------DYVRCGDCSPVNG---DMFVTGSYDHTVKLWDVRVENSKSVMEVNH------- 221 (532)
Q Consensus 161 ~iwd~~~~~~~~~~~~--~~-------~~v~~i~~~~~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~------- 221 (532)
..+|..+++.+..+.. |. .....+.... ++ ..++.++.+|.++++|..+++.........
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~ 364 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGY 364 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc-CCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccccc
Confidence 9999999998877643 21 1122233333 55 689999999999999999877654443221
Q ss_pred ---CCcE------------------------EEEEEecCCCEEEEEc-C-------------------------------
Q 038802 222 ---GKPI------------------------EDVMFLPSGGLIATAG-G------------------------------- 242 (532)
Q Consensus 222 ---~~~v------------------------~~i~~~~~~~~l~~~~-d------------------------------- 242 (532)
..++ ..++++|++.++++.. +
T Consensus 365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 1111 1568899888776642 1
Q ss_pred ------------CeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEe
Q 038802 243 ------------NSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHS 310 (532)
Q Consensus 243 ------------~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 310 (532)
+.|..||+.++ +.+..... ...+....+... +..++.++.||.+++||..+++.+..
T Consensus 445 ~~~~~~~~~~~~g~l~A~D~~tG-~~~W~~~~-~~~~~~g~~~~~---------g~~v~~g~~dg~l~a~D~~tG~~lw~ 513 (677)
T 1kb0_A 445 FFNAEPPKSKPFGRLLAWDPVAQ-KAAWSVEH-VSPWNGGTLTTA---------GNVVFQGTADGRLVAYHAATGEKLWE 513 (677)
T ss_dssp EECSSCCCSCCEEEEEEEETTTT-EEEEEEEE-SSSCCCCEEEET---------TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ccccccCCCCCccEEEEEeCCCC-cEEeecCC-CCCCcCcceEeC---------CCEEEEECCCCcEEEEECCCCceeee
Confidence 67999999887 66665542 233344445555 45788889999999999999999999
Q ss_pred eecCCCe--eEEEEecCCCEEEE
Q 038802 311 MRFPAPL--MSVAFSPDCMTRVI 331 (532)
Q Consensus 311 ~~~~~~v--~~~~~s~~~~~l~~ 331 (532)
+.....+ .-+.+..+|+.+++
T Consensus 514 ~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 514 APTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EECSSCCCSCCEEEEETTEEEEE
T ss_pred eeCCCCcccCCEEEEeCCEEEEE
Confidence 9855433 34566788865443
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.34 E-value=3e-10 Score=118.92 Aligned_cols=254 Identities=10% Similarity=0.134 Sum_probs=168.5
Q ss_pred CCeEEEEEeCCeEEEEeCCCceEEEEeecc--CceeEEEEEcc---CCCEEEEEc------CCCCEEEEECCCCceEEEe
Q 038802 63 TSHLFAATHSASLTLFSSQTLEKHSAISSF--KDVVTCSSFRP---DGSLLAASD------LSGLIQVFDVKSRTPLRRL 131 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~--~~~v~~~~~~~---~~~~l~~g~------~dg~i~iwd~~~~~~~~~~ 131 (532)
+..+++++.|+.|..+|..+|+.+..+... ......+..+| ++. +++++ .+|.|..||..+|+.+..+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 456888888999999999999998776542 11111111122 454 44443 3689999999999988776
Q ss_pred cCCC-------------------------------CCEEEEEeecCCCcEEEEEeCCCe-------------------EE
Q 038802 132 KSHT-------------------------------RPVRFVKYPFLDKLHLVSGGDDGI-------------------VK 161 (532)
Q Consensus 132 ~~h~-------------------------------~~i~~~~~~~~~~~~l~s~s~dg~-------------------i~ 161 (532)
.... .....++++| +...++.++.++. |.
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~ 278 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV 278 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 5210 0112567888 7778888887764 99
Q ss_pred EEECCCCeEEEeccC--CC-------CceEEEEEeCCCCC---EEEEEeCCCeEEEEEcccCCceeEEEecCC-------
Q 038802 162 FWDVAGESVVLDLFG--HK-------DYVRCGDCSPVNGD---MFVTGSYDHTVKLWDVRVENSKSVMEVNHG------- 222 (532)
Q Consensus 162 iwd~~~~~~~~~~~~--~~-------~~v~~i~~~~~~~~---~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~------- 222 (532)
.||..+++.+..+.. |. .......... ++. .++.++.+|.++++|.++++..........
T Consensus 279 AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~ 357 (689)
T 1yiq_A 279 AVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI-DGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMD 357 (689)
T ss_dssp EEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEE
T ss_pred EEEccCCceeEeeecCCcccccccCCCCcEEEeecc-CCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccC
Confidence 999999999887753 21 1222222222 444 788999999999999998776532221110
Q ss_pred -------------------------------CcEEEEEEecCCCEEEEEc------------------------------
Q 038802 223 -------------------------------KPIEDVMFLPSGGLIATAG------------------------------ 241 (532)
Q Consensus 223 -------------------------------~~v~~i~~~~~~~~l~~~~------------------------------ 241 (532)
..-..++++|+..++++..
T Consensus 358 ~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 437 (689)
T 1yiq_A 358 MKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTG 437 (689)
T ss_dssp TTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEEC
T ss_pred ccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccc
Confidence 0012368888877776641
Q ss_pred ----------------CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc
Q 038802 242 ----------------GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM 305 (532)
Q Consensus 242 ----------------d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 305 (532)
+|.|..||+.++ +.+.....+.. ...-.++.. +.+++.++.||.++.||.+++
T Consensus 438 ~~p~~~~~~~~~~~~~~g~l~A~D~~tG-~~~W~~~~~~~-~~~g~~~ta---------gglvf~gt~dg~l~a~D~~tG 506 (689)
T 1yiq_A 438 MMPEGAEGLLEMAKSWSGKLIAWDPVKQ-QAAWEVPYVTI-FNGGTLSTA---------GNLVFEGSADGRVIAYAADTG 506 (689)
T ss_dssp CCCSSHHHHHHHHTTCEEEEEEEETTTT-EEEEEEEESSS-CCCCEEEET---------TTEEEEECTTSEEEEEETTTC
T ss_pred ccCcccccCCCCCCCcceeEEEEECCCC-CeEeEccCCCC-ccCccceEC---------CCEEEEECCCCcEEEEECCCC
Confidence 267999999887 66666654432 222244444 568889999999999999999
Q ss_pred eEEEeeecCCCe--eEEEEecCCCEEE
Q 038802 306 KVTHSMRFPAPL--MSVAFSPDCMTRV 330 (532)
Q Consensus 306 ~~~~~~~~~~~v--~~~~~s~~~~~l~ 330 (532)
+.+..++....+ .-+.|..+|+..+
T Consensus 507 ~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 507 EKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp CEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ccceeeeCCCCcccCceEEEECCEEEE
Confidence 999998855433 3466778886443
No 231
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.31 E-value=8.3e-11 Score=112.04 Aligned_cols=266 Identities=11% Similarity=0.086 Sum_probs=172.4
Q ss_pred cCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEe
Q 038802 52 SSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRL 131 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 131 (532)
..+.++...+++. +.+++.+ |..+|. +++....+...........+. +..+.+++.++.+..+|.. ++.....
T Consensus 60 ~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~ 132 (330)
T 3hxj_A 60 IIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRF 132 (330)
T ss_dssp EEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEE
T ss_pred CcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEE
Confidence 3456777777775 4545444 888886 555544333322222223333 4567788888999999988 7777666
Q ss_pred cCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccC
Q 038802 132 KSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVE 211 (532)
Q Consensus 132 ~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~ 211 (532)
..+...+.++...+ ++ .++.++.++.|..+|.. ++....+......+.++...+ ++.+++ ++ +.+..+| .++
T Consensus 133 ~~~~~~~~~~~~~~-~g-~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~-~g~l~v-~t--~~l~~~d-~~g 204 (330)
T 3hxj_A 133 KTKKAIYATPIVSE-DG-TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGK-DGTIYF-GS--DKVYAIN-PDG 204 (330)
T ss_dssp ECSSCCCSCCEECT-TS-CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT-TCCEEE-ES--SSEEEEC-TTS
T ss_pred cCCCceeeeeEEcC-CC-EEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcC-CCEEEE-Ee--CEEEEEC-CCC
Confidence 65555566666654 44 47778888999999998 777766665556677777766 666544 44 7799999 554
Q ss_pred CceeEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEE
Q 038802 212 NSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSV 291 (532)
Q Consensus 212 ~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~ 291 (532)
+...... .....+.++...++|.+.+++.++.+..+|. ++ ..+.........+..+.+.++ ..++.+
T Consensus 205 ~~~~~~~-~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g-~~~~~~~~~~~~~~~~~~~~~----------g~l~v~ 271 (330)
T 3hxj_A 205 TEKWNFY-AGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DG-TEKWRFKTGKRIESSPVIGNT----------DTIYFG 271 (330)
T ss_dssp CEEEEEC-CSSCCCSCCEECTTSCEEEEETTTEEEEECT-TS-CEEEEEECSSCCCSCCEECTT----------SCEEEE
T ss_pred cEEEEEc-cCCcceeceEECCCCeEEEEcCCCeEEEECC-CC-CEeEEeeCCCCccccceEcCC----------CeEEEe
Confidence 4333332 3345678888888888777766888888874 33 344444433333344444433 357888
Q ss_pred ecCCeEEEEECCCceEEEeeecC-CCeeEEEEecCCCEEEEEecCCcEEEEeecCcc
Q 038802 292 ALDGYMKVFDYGKMKVTHSMRFP-APLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKE 347 (532)
Q Consensus 292 ~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~ 347 (532)
+.+|.|..+|. +++....+... ..+.++...++|. |..|+.+|.+++......+
T Consensus 272 t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 272 SYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp CTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC----
T ss_pred cCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEeccccc
Confidence 88989999996 67776666643 4567777777775 5668999999988776543
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.30 E-value=2.9e-08 Score=91.25 Aligned_cols=249 Identities=8% Similarity=-0.011 Sum_probs=156.3
Q ss_pred CeEEEEEeCCeEEEEeCCCceEE-----EEeeccCceeEEEEEccCCCEEE-EEcCCCCEEEEECCCCceEEEecCCCCC
Q 038802 64 SHLFAATHSASLTLFSSQTLEKH-----SAISSFKDVVTCSSFRPDGSLLA-ASDLSGLIQVFDVKSRTPLRRLKSHTRP 137 (532)
Q Consensus 64 ~~l~~~~~d~~v~i~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~~~~~h~~~ 137 (532)
++|+.+.. +.|+.+++...... ..+......+.+++|++++..|+ +...++.|..++.........+......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 45555554 57888887654321 11222234678999999765555 4555789999998765544334333356
Q ss_pred EEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeC---CCeEEEEEcccCCce
Q 038802 138 VRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSY---DHTVKLWDVRVENSK 214 (532)
Q Consensus 138 i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~---dg~i~iwd~~~~~~~ 214 (532)
...+++++.++..+++....+.|.++++..................++++| ++..++.+.. .+.|..+++.... .
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~-~~g~lyv~~~~~~~~~I~~~~~dg~~-~ 158 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDP-VRGNLYWTDWNRDNPKIETSHMDGTN-R 158 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEET-TTTEEEEEECCSSSCEEEEEETTSCC-C
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEee-CCCEEEEEECCCCCcEEEEEecCCCC-c
Confidence 789999983455555556678999999875432222222224567899998 5555544443 3688888876432 2
Q ss_pred eEEEecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEe
Q 038802 215 SVMEVNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVA 292 (532)
Q Consensus 215 ~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~ 292 (532)
.............+++++++..|..+. .+.|.++|+... ........ ......++.. + +..+++..
T Consensus 159 ~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~-~~~~~~~~-~~~P~gi~~d--~--------~~lyva~~ 226 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP-GRRKVLEG-LQYPFAVTSY--G--------KNLYYTDW 226 (267)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE-EEEEEEEC-CCSEEEEEEE--T--------TEEEEEET
T ss_pred EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC-ceEEEecC-CCCceEEEEe--C--------CEEEEEEC
Confidence 222212334578899999876655554 579999998653 22222222 2223455543 2 44555555
Q ss_pred cCCeEEEEECCCceEEEeeecCC--CeeEEEEecCCC
Q 038802 293 LDGYMKVFDYGKMKVTHSMRFPA--PLMSVAFSPDCM 327 (532)
Q Consensus 293 ~dg~i~iwd~~~~~~~~~~~~~~--~v~~~~~s~~~~ 327 (532)
.++.|..+|..+++.+..+.... ....+++.|++.
T Consensus 227 ~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 227 KTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 67899999999999988886432 478889988864
No 233
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.24 E-value=2.4e-12 Score=124.71 Aligned_cols=225 Identities=13% Similarity=0.121 Sum_probs=125.5
Q ss_pred CCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCC-ceE
Q 038802 104 DGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKD-YVR 182 (532)
Q Consensus 104 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~v~ 182 (532)
++..+++++.||.|+.||..+|+.+..+.. +.+.+..+.. ++..+++++.||.|+.||..+++.+.....+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 577899999999999999999999988876 4454444544 666777888999999999998887665543321 110
Q ss_pred -EEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEc
Q 038802 183 -CGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSM 260 (532)
Q Consensus 183 -~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~ 260 (532)
+..+. .+..+++|+.|+.++.||.++++..-..... . ...++|++..+++++ ++.|..||..++ +.+..+
T Consensus 85 ~sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~--~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG-~~~W~~ 156 (369)
T 2hz6_A 85 ASPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA--F---ADSLSPSTSLLYLGRTEYTITMYDTKTR-ELRWNA 156 (369)
T ss_dssp TCSCC-------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSS-SCCCEE
T ss_pred cCceEe--cCCEEEEEeCCCEEEEEECCCCcEEEEecCC--C---cccccccCCEEEEEecCCEEEEEECCCC-CEEEeE
Confidence 01111 3456788889999999999987665443322 1 234556777777777 899999999887 443333
Q ss_pred cCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecCCCeeE-EEEecCCCEEEE--EecCCc
Q 038802 261 ESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMS-VAFSPDCMTRVI--GTSNGT 337 (532)
Q Consensus 261 ~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~--g~~dg~ 337 (532)
..+. .....+..+. .....+++++.||.|+.||..+++.+..+....++.. ..++++|...+. ...++.
T Consensus 157 ~~~~--~~~~~~~~~~------~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~~v~~~~~~~~~ 228 (369)
T 2hz6_A 157 TYFD--YAASLPEDDV------DYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVMHINVAVET 228 (369)
T ss_dssp EEEE--ECCBCCCCCT------TCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCEEECCEEEEHHH
T ss_pred eccc--ccCccccCCc------cccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceEeccceeecccc
Confidence 2111 1111222210 0024678889999999999999999988887777654 344555543210 011345
Q ss_pred EEEEeecCcc
Q 038802 338 IFAGRRKKKE 347 (532)
Q Consensus 338 i~iw~~~~~~ 347 (532)
++.++..+++
T Consensus 229 l~~ld~~tG~ 238 (369)
T 2hz6_A 229 LRYLTFMSGE 238 (369)
T ss_dssp HHHHHHHHHH
T ss_pred eeeeehhcCC
Confidence 5666665544
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.23 E-value=1e-08 Score=98.46 Aligned_cols=219 Identities=13% Similarity=0.093 Sum_probs=144.9
Q ss_pred cCCCEEEE-EcCCCCEEEEECCCC----ceEEEec-------CCCCCEEEEEeecCCCcEEEEEeCC------CeEEEEE
Q 038802 103 PDGSLLAA-SDLSGLIQVFDVKSR----TPLRRLK-------SHTRPVRFVKYPFLDKLHLVSGGDD------GIVKFWD 164 (532)
Q Consensus 103 ~~~~~l~~-g~~dg~i~iwd~~~~----~~~~~~~-------~h~~~i~~~~~~~~~~~~l~s~s~d------g~i~iwd 164 (532)
+++++|++ |..++.|.++|+.+. +....+. .....-..+...| ++ .++++..+ |.|.++|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEE
Confidence 77777765 556789999999755 5555552 1112345567778 77 66666655 7899999
Q ss_pred CCCCeEEEeccCCCC---ceEEEEEeCCCCCEEEEEe-------------------CCCeEEEEEcccCCceeEEEec-C
Q 038802 165 VAGESVVLDLFGHKD---YVRCGDCSPVNGDMFVTGS-------------------YDHTVKLWDVRVENSKSVMEVN-H 221 (532)
Q Consensus 165 ~~~~~~~~~~~~~~~---~v~~i~~~~~~~~~l~s~s-------------------~dg~i~iwd~~~~~~~~~~~~~-~ 221 (532)
..+.+.+.++..... .-..+.|+| +++.+++.. .+.+|.+||+.+.+....+..+ .
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred CCCCeEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 999999988853222 223577899 888888874 4689999999986545554443 2
Q ss_pred CCcEEEEEE--ecCCCEEEEEc-------CCeEEEEEccCCC-eeeEE--ccCC----------------CcceEEEEEe
Q 038802 222 GKPIEDVMF--LPSGGLIATAG-------GNSVKIWDLIGGG-KMVYS--MESH----------------NKTVTSVCVG 273 (532)
Q Consensus 222 ~~~v~~i~~--~~~~~~l~~~~-------d~~i~iwd~~~~~-~~~~~--~~~~----------------~~~i~~~~~~ 273 (532)
......+.| +|+++++.++. +++|.+|....+. ..... +... ......+.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 234445655 99998665543 3577776654321 01111 1110 2346789999
Q ss_pred ccCCCCCccccccEEEEE-ecCCeEEEEECC---CceEEEeeecCC---------------CeeEEEEecCCCEEEEEe
Q 038802 274 RVGNESGEEAMQYRILSV-ALDGYMKVFDYG---KMKVTHSMRFPA---------------PLMSVAFSPDCMTRVIGT 333 (532)
Q Consensus 274 ~~~~~~~~~~~~~~l~s~-~~dg~i~iwd~~---~~~~~~~~~~~~---------------~v~~~~~s~~~~~l~~g~ 333 (532)
+++ ++|+++ -..+.|.+||+. +.+.+..+...+ ....++++|||++|+++.
T Consensus 330 ~DG---------rfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 330 LDD---------KFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTS---------CEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCC---------CEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 994 455544 457899999985 346666665431 358899999999999988
No 235
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.22 E-value=3e-09 Score=111.01 Aligned_cols=271 Identities=13% Similarity=0.132 Sum_probs=178.9
Q ss_pred CCeEEEEEeCCeEEEEeCCCceEEEEeeccCce----------e-EEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEe
Q 038802 63 TSHLFAATHSASLTLFSSQTLEKHSAISSFKDV----------V-TCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRL 131 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 131 (532)
+..+++++.++.|.-+|..+|+.+..+...... + ..+.+ ++..+++++.|+.|..+|..+|+.+..+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 457888888999999999999998877543211 0 11222 3557888888999999999999988877
Q ss_pred cCCC----CCEEE-EEeecCCCcEEEEEeC------CCeEEEEECCCCeEEEeccCC---C-------------------
Q 038802 132 KSHT----RPVRF-VKYPFLDKLHLVSGGD------DGIVKFWDVAGESVVLDLFGH---K------------------- 178 (532)
Q Consensus 132 ~~h~----~~i~~-~~~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~---~------------------- 178 (532)
.... ..+.+ .... ++ .+++++. +|.|..+|..+++.+..+... .
T Consensus 144 ~~~~~~~~~~~~~~P~v~--~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 220 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVV--KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGD 220 (668)
T ss_dssp ECSCTTSSCBCCSCCEEE--TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred ccCCCCCcceecCCCEEE--CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcc
Confidence 6421 11110 1111 34 4555433 589999999999988776421 0
Q ss_pred ---------CceEEEEEeCCCCCEEEEEeCCCe-------------------EEEEEcccCCceeEEEec-CC-------
Q 038802 179 ---------DYVRCGDCSPVNGDMFVTGSYDHT-------------------VKLWDVRVENSKSVMEVN-HG------- 222 (532)
Q Consensus 179 ---------~~v~~i~~~~~~~~~l~s~s~dg~-------------------i~iwd~~~~~~~~~~~~~-~~------- 222 (532)
.....+++.| ..+.++.++.++. |..+|.++++..-.+... |.
T Consensus 221 ~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~ 299 (668)
T 1kv9_A 221 QYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTAT 299 (668)
T ss_dssp CHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred ceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCC
Confidence 0112467777 6778888877763 999999987766555543 21
Q ss_pred CcEEEEEEecCCC---EEEEEc-CCeEEEEEccCCCeeeEEccCCC------------cce-------------------
Q 038802 223 KPIEDVMFLPSGG---LIATAG-GNSVKIWDLIGGGKMVYSMESHN------------KTV------------------- 267 (532)
Q Consensus 223 ~~v~~i~~~~~~~---~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~------------~~i------------------- 267 (532)
.+.....+..+|+ .++.++ +|.++++|..++ +.+....... .++
T Consensus 300 ~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG-~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~ 378 (668)
T 1kv9_A 300 QQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNG-KLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPF 378 (668)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC-CEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTT
T ss_pred CCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCC-CEeccccccccccccccccccCCccccccccccCCeeEECCCCc
Confidence 2333333444665 566666 899999998887 5443221111 000
Q ss_pred -----EEEEEeccCCCCCccccccEEEE------------------------------------EecCCeEEEEECCCce
Q 038802 268 -----TSVCVGRVGNESGEEAMQYRILS------------------------------------VALDGYMKVFDYGKMK 306 (532)
Q Consensus 268 -----~~~~~~~~~~~~~~~~~~~~l~s------------------------------------~~~dg~i~iwd~~~~~ 306 (532)
..++++|+. .+++. ...+|.|..||+.+++
T Consensus 379 G~~~w~~~a~dp~~---------g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~ 449 (668)
T 1kv9_A 379 GAHNWHSMSFNPGT---------GLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQK 449 (668)
T ss_dssp CSSCSSCCEEETTT---------TEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTE
T ss_pred cccCCCcceECCCC---------CEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCc
Confidence 013444432 22221 1235889999999999
Q ss_pred EEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 307 VTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 307 ~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
.+.......+.....+...+..+++|+.||.|+.||..+++..
T Consensus 450 ~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 450 AAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp EEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 9988887666666667777889999999999999999988765
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.21 E-value=1.5e-09 Score=107.84 Aligned_cols=230 Identities=12% Similarity=0.029 Sum_probs=159.2
Q ss_pred CCCEEEEEcC-CCCEEEEECCCCceEEEecC-CCCCEEEEEe-e-cCCCcEEEEEe------------------CCCeEE
Q 038802 104 DGSLLAASDL-SGLIQVFDVKSRTPLRRLKS-HTRPVRFVKY-P-FLDKLHLVSGG------------------DDGIVK 161 (532)
Q Consensus 104 ~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~-h~~~i~~~~~-~-~~~~~~l~s~s------------------~dg~i~ 161 (532)
||+++++... ++.|.+.|+.+.++...+.- .......+++ + | ++.++++++ .++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWP-RSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSS-BCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecC-CCcEEEEecccccccCCCCcccccccccCceEE
Confidence 8888887765 45699999999998875442 2345788887 4 7 888888885 346899
Q ss_pred EEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCC--------------------------------------eE
Q 038802 162 FWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDH--------------------------------------TV 203 (532)
Q Consensus 162 iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg--------------------------------------~i 203 (532)
++|..+.+....+.-.. .-..++++| +++++++.+.+. .|
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 99999998887775322 334677888 888888887653 35
Q ss_pred EEEEccc--CCceeEEEecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCC-----------eeeEEccCCCcceE
Q 038802 204 KLWDVRV--ENSKSVMEVNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGG-----------KMVYSMESHNKTVT 268 (532)
Q Consensus 204 ~iwd~~~--~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~-----------~~~~~~~~~~~~i~ 268 (532)
.+.|.++ ++. ....+.-.....++.++|||+++++++ ++.|.++|+.+.. ....... -.....
T Consensus 257 ~VID~~~~~~~~-~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~ 334 (595)
T 1fwx_A 257 KVVDGRKEASSL-FTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPL 334 (595)
T ss_dssp EEEECSGGGCCS-SEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEE
T ss_pred EEEeCcccCCce-eEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcc
Confidence 6666665 222 122222234567899999999988887 6899999998541 1233333 234568
Q ss_pred EEEEeccCCCCCccccccEEEEEecCCeEEEEECCC----------ceEEEeeecCCCe------eEEEEecCCCEEEEE
Q 038802 269 SVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK----------MKVTHSMRFPAPL------MSVAFSPDCMTRVIG 332 (532)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~~v------~~~~~s~~~~~l~~g 332 (532)
.++|+++ +...++.-.|++|.+||+.+ .+.+..+...-.+ .++.++|||++|+++
T Consensus 335 h~aF~~d---------G~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 335 HTAFDGR---------GNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp EEEECTT---------SEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred eEEECCC---------CeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 8999998 54566777899999999987 5677777633222 123458999999988
Q ss_pred ec---CCc----------EEEEeecCcc
Q 038802 333 TS---NGT----------IFAGRRKKKE 347 (532)
Q Consensus 333 ~~---dg~----------i~iw~~~~~~ 347 (532)
.. |.. -.++|+..++
T Consensus 406 Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 406 SKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp ESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred CCCCccccccCCCCCCCcceEEEcCCCc
Confidence 64 332 1778885543
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.21 E-value=1.9e-10 Score=109.50 Aligned_cols=258 Identities=14% Similarity=0.077 Sum_probs=171.3
Q ss_pred EEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCC
Q 038802 56 SIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHT 135 (532)
Q Consensus 56 ~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~ 135 (532)
+..+..++ .+.+++.++.|..|| .+++...........+.++...+++. +.+++.+ +..+|. +++.+..+....
T Consensus 24 ~~~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~ 97 (330)
T 3hxj_A 24 SPILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKK 97 (330)
T ss_dssp CCEECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC--
T ss_pred CceEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCC
Confidence 44555555 467777788999999 88887776665556667777777775 5555544 888886 555544443333
Q ss_pred CCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCcee
Q 038802 136 RPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKS 215 (532)
Q Consensus 136 ~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 215 (532)
.......+. +..+..++.++.|..+|.. ++.......+...+.++...+ ++. ++.++.++.+..+|.. ++...
T Consensus 98 ~~~~~~~~~---~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~-~g~-l~vgt~~~~l~~~d~~-g~~~~ 170 (330)
T 3hxj_A 98 AIVSDFTIF---EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSE-DGT-IYVGSNDNYLYAINPD-GTEKW 170 (330)
T ss_dssp ---CCEEEE---TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT-TSC-EEEECTTSEEEEECTT-SCEEE
T ss_pred CcccCceEE---CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcC-CCE-EEEEcCCCEEEEECCC-CCEeE
Confidence 222233332 4457888889999999998 777666655555566666665 555 6667788999999987 54444
Q ss_pred EEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCC
Q 038802 216 VMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDG 295 (532)
Q Consensus 216 ~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg 295 (532)
... .....+.++...+++.+.+++ +.+..+| .++ ............+.++...+++ .+..++.++
T Consensus 171 ~~~-~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g-~~~~~~~~~~~~~~~~~~~~~g----------~l~v~t~~~ 235 (330)
T 3hxj_A 171 RFK-TNDAITSAASIGKDGTIYFGS--DKVYAIN-PDG-TEKWNFYAGYWTVTRPAISEDG----------TIYVTSLDG 235 (330)
T ss_dssp EEE-CSSCCCSCCEECTTCCEEEES--SSEEEEC-TTS-CEEEEECCSSCCCSCCEECTTS----------CEEEEETTT
T ss_pred EEe-cCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCC-cEEEEEccCCcceeceEECCCC----------eEEEEcCCC
Confidence 443 234456777787788866665 8899999 555 4555555555667777777653 477777788
Q ss_pred eEEEEECCCceEEEeeecCC-CeeEEEEecCCCEEEEEecCCcEEEEee
Q 038802 296 YMKVFDYGKMKVTHSMRFPA-PLMSVAFSPDCMTRVIGTSNGTIFAGRR 343 (532)
Q Consensus 296 ~i~iwd~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~g~~dg~i~iw~~ 343 (532)
.+..+|. +++.+..+.... .+.++.+.++| .|.+++.+|.|..++.
T Consensus 236 gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 236 HLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP 282 (330)
T ss_dssp EEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT
T ss_pred eEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC
Confidence 8888884 555555555333 34455565555 5677888888999985
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.17 E-value=1.6e-08 Score=97.06 Aligned_cols=220 Identities=12% Similarity=0.069 Sum_probs=147.4
Q ss_pred CCCCeEEEEE-eCCeEEEEeCCCc----eEEEEee------c-cCceeEEEEEccCCCEEEEEcCC------CCEEEEEC
Q 038802 61 PTTSHLFAAT-HSASLTLFSSQTL----EKHSAIS------S-FKDVVTCSSFRPDGSLLAASDLS------GLIQVFDV 122 (532)
Q Consensus 61 p~~~~l~~~~-~d~~v~i~~~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~l~~g~~d------g~i~iwd~ 122 (532)
+++++|++.+ .+++|+++|+.+. +.+.++. . .......+...|+| +++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7888777654 5789999998754 6666663 1 11245667788999 66665444 78999999
Q ss_pred CCCceEEEecCCCC---CEEEEEeecCCCcEEEEEe-------------------CCCeEEEEECCCCeEEEeccCC-C-
Q 038802 123 KSRTPLRRLKSHTR---PVRFVKYPFLDKLHLVSGG-------------------DDGIVKFWDVAGESVVLDLFGH-K- 178 (532)
Q Consensus 123 ~~~~~~~~~~~h~~---~i~~~~~~~~~~~~l~s~s-------------------~dg~i~iwd~~~~~~~~~~~~~-~- 178 (532)
.+.+.+.++..... --..+.|+| +++.+++.. .+.+|.+||+.+++.+.++... .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCeEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 99999998863222 233577899 888777774 3789999999999888877542 1
Q ss_pred CceEEEEE--eCCCCCEEEEEe------CCCeEEEEEcccCCceeEEE--ecC-----------------CCcEEEEEEe
Q 038802 179 DYVRCGDC--SPVNGDMFVTGS------YDHTVKLWDVRVENSKSVME--VNH-----------------GKPIEDVMFL 231 (532)
Q Consensus 179 ~~v~~i~~--~~~~~~~l~s~s------~dg~i~iwd~~~~~~~~~~~--~~~-----------------~~~v~~i~~~ 231 (532)
.....+.| +| +++++++++ .+++|.+|....+....... ... ......|.++
T Consensus 251 ~~P~~i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 251 RMALELRPLHDP-TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEECSST-TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CccceeEeeECC-CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 23344555 88 888777766 46688877665422111111 110 2446789999
Q ss_pred cCCCEEEEEc--CCeEEEEEccCCC--eeeEEccCCC--------------cceEEEEEeccCCCCCccccccEEEEEe
Q 038802 232 PSGGLIATAG--GNSVKIWDLIGGG--KMVYSMESHN--------------KTVTSVCVGRVGNESGEEAMQYRILSVA 292 (532)
Q Consensus 232 ~~~~~l~~~~--d~~i~iwd~~~~~--~~~~~~~~~~--------------~~i~~~~~~~~~~~~~~~~~~~~l~s~~ 292 (532)
+||++|.++. .+.|.+||+.... +.+..+.... +.-..+.++|+ +++|+++.
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpD---------Gk~LyVaN 399 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRD---------GRRVYVTN 399 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTT---------SSEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCC---------CCEEEEEc
Confidence 9999998887 6899999986332 3444433210 12467889998 56666665
No 239
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.13 E-value=4.2e-09 Score=100.83 Aligned_cols=226 Identities=7% Similarity=-0.048 Sum_probs=147.3
Q ss_pred ccccCeeEEEEcCCCCeEEEEEe-----CCeEEEEeCCCceEEEEeecc------CceeEEEEEccCCCEE-EEEc---C
Q 038802 49 GLVSSINSIVFSPTTSHLFAATH-----SASLTLFSSQTLEKHSAISSF------KDVVTCSSFRPDGSLL-AASD---L 113 (532)
Q Consensus 49 ~h~~~V~~i~~sp~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l-~~g~---~ 113 (532)
+|...+.+++++++++++++-+. ++.|.+||..+++....+... ...+..+++++++..+ ++.. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 46678999999999875554433 579999999998877666432 2356889999865454 4444 5
Q ss_pred CCCEEEEECCCCceEEEecCCCCCEE-EEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCC
Q 038802 114 SGLIQVFDVKSRTPLRRLKSHTRPVR-FVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGD 192 (532)
Q Consensus 114 dg~i~iwd~~~~~~~~~~~~h~~~i~-~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 192 (532)
++.|.+||..+++..+.+.+|..... ...+.+ ++..+.+.+.++.+..|. ..+..++++| +++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~-~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~-dg~ 207 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVI-DGVPVQIGQPDGTVIRPH--------------LGVNGIVLDA-ENE 207 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEE-TTEECBEECTTSCEECCC--------------CCEEEEEECT-TSC
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeE-CCEEEEeccCCCceecee--------------cccceeEecc-CCC
Confidence 78999999998887777765432111 133455 666777777888876653 2356899999 888
Q ss_pred EEEEEeCCC-eEEEEEcccCCc---------eeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEcc
Q 038802 193 MFVTGSYDH-TVKLWDVRVENS---------KSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSME 261 (532)
Q Consensus 193 ~l~s~s~dg-~i~iwd~~~~~~---------~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~ 261 (532)
.|+.+..++ .+..++...... ......++......++++++|.++++.. ++.|.+||..++ +......
T Consensus 208 ~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G-~~~~~~~ 286 (343)
T 2qe8_A 208 WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADR-AYKLLVT 286 (343)
T ss_dssp EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT-EEEEEEE
T ss_pred EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCC-CEEEEEE
Confidence 888877665 455554321000 0011112334556799999999888887 789999997444 3322222
Q ss_pred C-CCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEE
Q 038802 262 S-HNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVF 300 (532)
Q Consensus 262 ~-~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iw 300 (532)
. +.....++++.++ +.++++.+..+.+.+|
T Consensus 287 ~~~~~~p~~va~~~~---------g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 287 DEKLSWTDSFNFGSD---------GYLYFDCNQLHHSAPL 317 (343)
T ss_dssp CGGGSCEEEEEECTT---------SCEEEEECCGGGSGGG
T ss_pred CCceecCCeeEECCC---------CcEEEEeCcccccccc
Confidence 1 2345788999877 4566666544444333
No 240
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.09 E-value=6.8e-08 Score=98.60 Aligned_cols=281 Identities=10% Similarity=0.053 Sum_probs=171.9
Q ss_pred CCeEEEEEe-CCeEEEEeC-CCceEEEEeeccCce-----------eEEEEEccCCCE----EEEEcCCCCEEEEECCCC
Q 038802 63 TSHLFAATH-SASLTLFSS-QTLEKHSAISSFKDV-----------VTCSSFRPDGSL----LAASDLSGLIQVFDVKSR 125 (532)
Q Consensus 63 ~~~l~~~~~-d~~v~i~~~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~----l~~g~~dg~i~iwd~~~~ 125 (532)
+..+++++. ++.|.-+|. .+++.+-.+...... ...+++.|.+.. +++++.|+.+..+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 446777777 899999999 899988777543211 123455444444 888888999999999999
Q ss_pred ceEEEecCCC----CCEEE-EEeecCCCcEEEEEe------CCCeEEEEECCCCeEEEeccCCCCc--------------
Q 038802 126 TPLRRLKSHT----RPVRF-VKYPFLDKLHLVSGG------DDGIVKFWDVAGESVVLDLFGHKDY-------------- 180 (532)
Q Consensus 126 ~~~~~~~~h~----~~i~~-~~~~~~~~~~l~s~s------~dg~i~iwd~~~~~~~~~~~~~~~~-------------- 180 (532)
+.+....... ..+.+ -... ++ .+++++ .+|.|+.+|..+++.+..+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~--~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV--KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE--TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CEEEeecCCCCCccceeecCCEEE--CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence 9887765322 01111 1111 44 455554 3899999999999988766432111
Q ss_pred -----------------------e-EEEEEeCCCCCEEEEEeCC----------------CeEEEEEcccCCceeEEEec
Q 038802 181 -----------------------V-RCGDCSPVNGDMFVTGSYD----------------HTVKLWDVRVENSKSVMEVN 220 (532)
Q Consensus 181 -----------------------v-~~i~~~~~~~~~l~s~s~d----------------g~i~iwd~~~~~~~~~~~~~ 220 (532)
+ ..+++.+ ....++.++.+ +.|..+|.++++..-.+...
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~-~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~ 297 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKT 297 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESS
T ss_pred cccccccccccCCCcceecCCCccccceeEeC-CCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecC
Confidence 0 1345666 56677777655 37999999987766555543
Q ss_pred CC---------CcEEEEEEe-cCC---CEEEEEc-CCeEEEEEccCCCeeeEEccCC-------------Ccce------
Q 038802 221 HG---------KPIEDVMFL-PSG---GLIATAG-GNSVKIWDLIGGGKMVYSMESH-------------NKTV------ 267 (532)
Q Consensus 221 ~~---------~~v~~i~~~-~~~---~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~-------------~~~i------ 267 (532)
+. .++. +... .+| ..++.++ +|.+.++|..++ +.+...... ..++
T Consensus 298 ~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG-~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~ 375 (599)
T 1w6s_A 298 PHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDG-ALVSANKLDDTVNVFKSVDLKTGQPVRDPEYG 375 (599)
T ss_dssp TTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTC-CEEEEEESSTTCCSEEEECTTTCCEEECGGGC
T ss_pred CCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCC-CEeecccccCCcccccccccCCCceeeccccC
Confidence 22 1222 2222 467 4666666 899999998887 544433211 0111
Q ss_pred --------------------EEEEEeccCCCCCc----------------cccccE------EEE--Ee------cCCeE
Q 038802 268 --------------------TSVCVGRVGNESGE----------------EAMQYR------ILS--VA------LDGYM 297 (532)
Q Consensus 268 --------------------~~~~~~~~~~~~~~----------------~~~~~~------l~s--~~------~dg~i 297 (532)
..++++|+...... .....+ +.. .+ .+|.|
T Consensus 376 ~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l 455 (599)
T 1w6s_A 376 TRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQI 455 (599)
T ss_dssp CCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEE
T ss_pred CCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeE
Confidence 11233333100000 000000 111 01 35889
Q ss_pred EEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 298 KVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 298 ~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
.-||+.+++.+...+...+..+-.+...+..++.|+.||.|+.||..+++.+
T Consensus 456 ~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 456 KAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp EEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred EEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEE
Confidence 9999999999988875554443334446678888999999999999998876
No 241
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.08 E-value=5.4e-08 Score=99.44 Aligned_cols=270 Identities=11% Similarity=0.052 Sum_probs=171.2
Q ss_pred CCeEEEEEe-CCeEEEEeC-CCceEEEEeeccCc-e---------e-EEEEEccCCCEEEEEcCCCCEEEEECCCCceEE
Q 038802 63 TSHLFAATH-SASLTLFSS-QTLEKHSAISSFKD-V---------V-TCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLR 129 (532)
Q Consensus 63 ~~~l~~~~~-d~~v~i~~~-~~~~~~~~~~~~~~-~---------v-~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~ 129 (532)
+..+++++. ++.|.-+|. .+++.+-.+..... . + ..+++ ++..+++++.|+.+..+|..+++.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 446777777 899999999 89998877643221 0 0 11222 35578888889999999999999887
Q ss_pred EecCCC----CCEEE-EEeecCCCcEEEEEeC------CCeEEEEECCCCeEEEeccCCCCc------------------
Q 038802 130 RLKSHT----RPVRF-VKYPFLDKLHLVSGGD------DGIVKFWDVAGESVVLDLFGHKDY------------------ 180 (532)
Q Consensus 130 ~~~~h~----~~i~~-~~~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~------------------ 180 (532)
...... ..+.+ .... ++ .+++++. ++.|..+|..+++.+..+......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~--~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVA--KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEE--TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EecCCCCCccceeccCCEEE--CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 765321 01111 1111 34 4555554 799999999999988766432110
Q ss_pred --------------------eEEEEEeCCCCCEEEEEeCC----------------CeEEEEEcccCCceeEEEecC---
Q 038802 181 --------------------VRCGDCSPVNGDMFVTGSYD----------------HTVKLWDVRVENSKSVMEVNH--- 221 (532)
Q Consensus 181 --------------------v~~i~~~~~~~~~l~s~s~d----------------g~i~iwd~~~~~~~~~~~~~~--- 221 (532)
...+++.+ ....++.++.+ +.|..+|.++++..-.+...+
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~-~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~ 295 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDP-KLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDE 295 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCS
T ss_pred cccccccCcccceecCCCCeeeeEEEcC-CCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcc
Confidence 01355666 55566665532 359999999877655554322
Q ss_pred ------CCcEEEEEEecCCC---EEEEEc-CCeEEEEEccCCCeeeEEccCCC-------------cce-----------
Q 038802 222 ------GKPIEDVMFLPSGG---LIATAG-GNSVKIWDLIGGGKMVYSMESHN-------------KTV----------- 267 (532)
Q Consensus 222 ------~~~v~~i~~~~~~~---~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~-------------~~i----------- 267 (532)
..++. +...++|+ .++.++ +|.+.++|..++ +.+....... .++
T Consensus 296 ~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG-~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~ 373 (571)
T 2ad6_A 296 WDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENG-NLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDH 373 (571)
T ss_dssp SCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTC-CEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTC
T ss_pred cccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCC-CEEeeecccCCccccccccccCCceecccccCCCCCC
Confidence 12221 22234674 566666 889999998887 5544432111 111
Q ss_pred ---------------EEEEEeccCCCCCccccccEEEEEe-------------------------------------cCC
Q 038802 268 ---------------TSVCVGRVGNESGEEAMQYRILSVA-------------------------------------LDG 295 (532)
Q Consensus 268 ---------------~~~~~~~~~~~~~~~~~~~~l~s~~-------------------------------------~dg 295 (532)
..++++|+ ..+++..+ .+|
T Consensus 374 ~~~~~~P~~~Gg~~w~~~a~dp~---------~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g 444 (571)
T 2ad6_A 374 KGTNICPSAMGFHNQGVDSYDPE---------SRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMG 444 (571)
T ss_dssp CEEEESSCTTCSSCSCBCEEETT---------TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCE
T ss_pred CceEECCCCccccCCCCceECCC---------CCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCC
Confidence 12344444 23333332 358
Q ss_pred eEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 296 YMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 296 ~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
.|..||+.+++.+..+....++.+..+...+..+++++.||.|+.||..+++.+
T Consensus 445 ~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 445 QIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp EEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred eEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 899999999999988876666555555555678888999999999999988766
No 242
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.07 E-value=3e-07 Score=84.36 Aligned_cols=231 Identities=8% Similarity=-0.029 Sum_probs=140.3
Q ss_pred CEEEEEcCCCCEEEEECCCCce-----EEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCc
Q 038802 106 SLLAASDLSGLIQVFDVKSRTP-----LRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDY 180 (532)
Q Consensus 106 ~~l~~g~~dg~i~iwd~~~~~~-----~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 180 (532)
.+|+.+. .+.|+.+++..... ...+......+..++|++.++..+++...++.|..+++........+......
T Consensus 2 ~~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEc-CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 3455544 34688888765431 11121122346789999844555556666789999999766543333323346
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C---CeEEEEEccCCCee
Q 038802 181 VRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G---NSVKIWDLIGGGKM 256 (532)
Q Consensus 181 v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d---~~i~iwd~~~~~~~ 256 (532)
...+++++..+.++++....+.|.++++...... ............++++|++..|..+. . +.|..+++......
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~-~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~ 159 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR-VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR 159 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE-EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE
Confidence 7899999833455556566789999998753222 22212224568999999655444443 3 58888887643211
Q ss_pred eEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEE-ecC
Q 038802 257 VYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIG-TSN 335 (532)
Q Consensus 257 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g-~~d 335 (532)
. ...........+++++++ +.++++-...+.|.++|+.................++.. +..++.+ ..+
T Consensus 160 ~-~~~~~~~~P~gia~d~~~--------~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~ 228 (267)
T 1npe_A 160 I-LAQDNLGLPNGLTFDAFS--------SQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKT 228 (267)
T ss_dssp E-EECTTCSCEEEEEEETTT--------TEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTT
T ss_pred E-EEECCCCCCcEEEEcCCC--------CEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCC
Confidence 1 111223457889999874 455566666789999999876544444433344667654 4455544 456
Q ss_pred CcEEEEeecCcccc
Q 038802 336 GTIFAGRRKKKENV 349 (532)
Q Consensus 336 g~i~iw~~~~~~~~ 349 (532)
+.|..++..+++..
T Consensus 229 ~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 229 NSVIAMDLAISKEM 242 (267)
T ss_dssp TEEEEEETTTTEEE
T ss_pred CeEEEEeCCCCCce
Confidence 88999998776543
No 243
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.05 E-value=1.3e-06 Score=93.55 Aligned_cols=274 Identities=9% Similarity=0.059 Sum_probs=179.0
Q ss_pred eeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEe-eccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEec
Q 038802 54 INSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAI-SSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLK 132 (532)
Q Consensus 54 V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 132 (532)
|.++...+++. +.+++.++.+..|+..+++..... ......|.++...+++.+.+ |+.++-+.+||..+++......
T Consensus 175 i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYRQGDQ-IYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEEETTE-EEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECC
T ss_pred eEEEEECCCCC-EEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeec
Confidence 88888888775 555776656889998776543321 12346788888888876554 4444448899987765443222
Q ss_pred C-------CCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEecc-------CCCCceEEEEEeCCCCCEEEEEe
Q 038802 133 S-------HTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLF-------GHKDYVRCGDCSPVNGDMFVTGS 198 (532)
Q Consensus 133 ~-------h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~i~~~~~~~~~l~s~s 198 (532)
. ....|.++...+ ++. +..|+.+ -|.+||..++....... .....|.++...+ ++. +..|+
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~-~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-~g~-lWigt 327 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDS-QNR-LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDS-QGG-MWLGT 327 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECT-TSC-EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECT-TSC-EEEEE
T ss_pred CCCCccccCCCeEEEEEEcC-CCC-EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeC-CcC-EEEEE
Confidence 1 135689998876 554 5666665 58999988776544321 1235789998887 665 55577
Q ss_pred CCCeEEEEEcccCCceeEEEec-----CCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEcc--------CCCc
Q 038802 199 YDHTVKLWDVRVENSKSVMEVN-----HGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSME--------SHNK 265 (532)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~-----~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~--------~~~~ 265 (532)
.++-|..|+..+.......... ....|.++...++|.+.+...++.+..||..++ ....... ....
T Consensus 328 ~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 406 (795)
T 4a2l_A 328 YFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQ-RFTSYTLQEDESARGIGSN 406 (795)
T ss_dssp SSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTC-CEEEECCC------CCSCS
T ss_pred CCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCC-cEEEEecCCCCcccCCCCc
Confidence 7777999987664322221111 245699999999988777666778999997665 2222111 1235
Q ss_pred ceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-----cCCCeeEEEEecCCCEEEEEecCCcEEE
Q 038802 266 TVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-----FPAPLMSVAFSPDCMTRVIGTSNGTIFA 340 (532)
Q Consensus 266 ~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~g~~dg~i~i 340 (532)
.|.+++..++ +..|..|+.++-|..||..+++...... ....|.++...++|...+.. . +.|.+
T Consensus 407 ~v~~i~~d~~---------g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~ 475 (795)
T 4a2l_A 407 NIKAVYVDEK---------KSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVR 475 (795)
T ss_dssp CEEEEEEETT---------TTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEE
T ss_pred cEEEEEEcCC---------CCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeE
Confidence 6888888766 4447778887889999998876544321 23578999988888766544 4 45778
Q ss_pred EeecCc
Q 038802 341 GRRKKK 346 (532)
Q Consensus 341 w~~~~~ 346 (532)
|+..++
T Consensus 476 ~~~~~~ 481 (795)
T 4a2l_A 476 FNPEQR 481 (795)
T ss_dssp EETTTT
T ss_pred EeCCCC
Confidence 887654
No 244
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.04 E-value=2.5e-06 Score=91.40 Aligned_cols=275 Identities=12% Similarity=0.090 Sum_probs=178.8
Q ss_pred ccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeec-------cCceeEEEEEccCCCEEEEEcCCCCEEEEECC
Q 038802 51 VSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISS-------FKDVVTCSSFRPDGSLLAASDLSGLIQVFDVK 123 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 123 (532)
...|.++...+++. +.+|+.++-+..||..+++....... ....|.++...++|.+.+ |+.+ -|.+||..
T Consensus 214 ~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTR-IWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTE-EEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETT
T ss_pred CCeeEEEEEcCCCC-EEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCC
Confidence 45688888887775 56677665689999887654433221 135799999988886544 4445 48899987
Q ss_pred CCceEEEecC-------CCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEecc------CCCCceEEEEEeCCC
Q 038802 124 SRTPLRRLKS-------HTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLF------GHKDYVRCGDCSPVN 190 (532)
Q Consensus 124 ~~~~~~~~~~-------h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~------~~~~~v~~i~~~~~~ 190 (532)
++........ ....|.++...+ ++. +..|+.++-|..|+..++....... .....|.++...+ +
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~-~ 367 (795)
T 4a2l_A 291 TDSFASYSSNPVENGSLSQRSVRSIFMDS-QGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK-D 367 (795)
T ss_dssp TTEEEEECCCTTSTTSCSSSCEEEEEECT-TSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT-T
T ss_pred CCeEEEEecCCCCCCCCCCCcEEEEEEeC-CcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC-C
Confidence 7654432211 235799998876 554 7778888889999876554322111 1245688888876 5
Q ss_pred CCEEEEEeCCCeEEEEEcccCCceeEEEe-------cCCCcEEEEEEecCCC-EEEEEcCCeEEEEEccCCCeeeEEcc-
Q 038802 191 GDMFVTGSYDHTVKLWDVRVENSKSVMEV-------NHGKPIEDVMFLPSGG-LIATAGGNSVKIWDLIGGGKMVYSME- 261 (532)
Q Consensus 191 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-------~~~~~v~~i~~~~~~~-~l~~~~d~~i~iwd~~~~~~~~~~~~- 261 (532)
++ +..|+.++-|..||..++........ -....|.++...++|. +.+...++.+..||..++ +......
T Consensus 368 g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~-~~~~~~~~ 445 (795)
T 4a2l_A 368 KN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG-QVENFNQR 445 (795)
T ss_dssp SC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC-CEEEECTT
T ss_pred CC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC-cEEEeecC
Confidence 55 55577777799999876433222110 1235789999999998 555444678999998765 3222211
Q ss_pred ---CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-------cCCCeeEEEEecCCCEEEE
Q 038802 262 ---SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-------FPAPLMSVAFSPDCMTRVI 331 (532)
Q Consensus 262 ---~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~~ 331 (532)
.+...|.++...+++ . |..|+.+ -+.+||..+++...... ....|.++...++|...+.
T Consensus 446 ~~~l~~~~v~~i~~d~~g---------~-lwigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig 514 (795)
T 4a2l_A 446 NSQLVNENVYAILPDGEG---------N-LWLGTLS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIG 514 (795)
T ss_dssp TSCCSCSCEEEEEECSSS---------C-EEEEESS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEE
T ss_pred CCCcCCCeeEEEEECCCC---------C-EEEEecC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEE
Confidence 234568888877663 3 5555554 58889988876544321 1256899999999887665
Q ss_pred EecCCcEEEEeecCc
Q 038802 332 GTSNGTIFAGRRKKK 346 (532)
Q Consensus 332 g~~dg~i~iw~~~~~ 346 (532)
.. +.|..|+..+.
T Consensus 515 t~--~Gl~~~~~~~~ 527 (795)
T 4a2l_A 515 GE--EGLSVFKQEGL 527 (795)
T ss_dssp ES--SCEEEEEEETT
T ss_pred eC--CceEEEeCCCC
Confidence 44 55778877654
No 245
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.03 E-value=2.1e-07 Score=83.98 Aligned_cols=205 Identities=8% Similarity=0.017 Sum_probs=141.2
Q ss_pred eEEEEeeccC--ceeEEEEEccCCCEEEEEcC--CCCEEEEECCCCceEEEecCCCC-CEEEEEeecCCCcEEEEEeCCC
Q 038802 84 EKHSAISSFK--DVVTCSSFRPDGSLLAASDL--SGLIQVFDVKSRTPLRRLKSHTR-PVRFVKYPFLDKLHLVSGGDDG 158 (532)
Q Consensus 84 ~~~~~~~~~~--~~v~~~~~~~~~~~l~~g~~--dg~i~iwd~~~~~~~~~~~~h~~-~i~~~~~~~~~~~~l~s~s~dg 158 (532)
+.+.++. |. .....+.|++++.+.++.+. ++.|.++|+.+++.+..+..... ....+++. ++...++.-.++
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence 4455553 33 23688999998755544443 57999999999999888753222 22345554 345555555689
Q ss_pred eEEEEECCCCeEEEeccCC-CCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecC-CC---cEEEEEEecC
Q 038802 159 IVKFWDVAGESVVLDLFGH-KDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNH-GK---PIEDVMFLPS 233 (532)
Q Consensus 159 ~i~iwd~~~~~~~~~~~~~-~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~---~v~~i~~~~~ 233 (532)
.+.++|..+.+.+.++... .. ...+++ ++..++++..++.|.++|..+.+.......+. +. ..+.+.|. +
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~~---g~glt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-d 161 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMKD---GWGLAT-DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-N 161 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSSS---CCEEEE-CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred EEEEEECCCCcEEEEEECCCCC---eEEEEE-CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-C
Confidence 9999999999998887532 22 233555 66666666678899999998876666655432 22 35678887 7
Q ss_pred CCEEEEEc-CCeEEEEEccCCCeeeEEccCC-------------CcceEEEEEeccCCCCCccccccEEEEEecCCeEEE
Q 038802 234 GGLIATAG-GNSVKIWDLIGGGKMVYSMESH-------------NKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKV 299 (532)
Q Consensus 234 ~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~i 299 (532)
|.+.+... ++.|.+.|..++ +.+..+... ....+.++++|++ ...++++...+.+.+
T Consensus 162 g~lyvn~~~~~~V~vID~~tg-~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~--------~~lfVTgk~~~~v~~ 232 (266)
T 2iwa_A 162 GEVWANIWQTDCIARISAKDG-TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQEN--------KRIFVTGKLWPKLFE 232 (266)
T ss_dssp TEEEEEETTSSEEEEEETTTC-CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTT--------TEEEEEETTCSEEEE
T ss_pred CEEEEecCCCCeEEEEECCCC-cEEEEEECCCcccccccccccccCceEEEEEcCCC--------CEEEEECCCCCeEEE
Confidence 76666555 789999999887 666666432 1245899999996 567788888899988
Q ss_pred EECCCc
Q 038802 300 FDYGKM 305 (532)
Q Consensus 300 wd~~~~ 305 (532)
.++...
T Consensus 233 i~l~~~ 238 (266)
T 2iwa_A 233 IKLHLV 238 (266)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 887553
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.99 E-value=3.2e-07 Score=95.68 Aligned_cols=257 Identities=11% Similarity=0.138 Sum_probs=163.7
Q ss_pred CCeEEEEEeCCeEEEEeCCCceEEEEeeccC----ceeEEEEEccCCCEEEEEcC------CCCEEEEECCCCceEEEec
Q 038802 63 TSHLFAATHSASLTLFSSQTLEKHSAISSFK----DVVTCSSFRPDGSLLAASDL------SGLIQVFDVKSRTPLRRLK 132 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~g~~------dg~i~iwd~~~~~~~~~~~ 132 (532)
+..+++++.|+.|..+|..+|+.+..+.... ..+.+.-.-.++ .++++.. +|.|..+|..+++.+..+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 4467888889999999999999987775421 111110000144 4555532 5899999999999988775
Q ss_pred CCC---C----------------------------CEEEEEeecCCCcEEEEEeCCCe-------------------EEE
Q 038802 133 SHT---R----------------------------PVRFVKYPFLDKLHLVSGGDDGI-------------------VKF 162 (532)
Q Consensus 133 ~h~---~----------------------------~i~~~~~~~~~~~~l~s~s~dg~-------------------i~i 162 (532)
... . ....++++| ....++.++.++. |..
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~A 274 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILA 274 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 210 0 112367777 6677888877763 999
Q ss_pred EECCCCeEEEeccC--CC-------CceEEEEEeCCCCC---EEEEEeCCCeEEEEEcccCCceeEEEecC---------
Q 038802 163 WDVAGESVVLDLFG--HK-------DYVRCGDCSPVNGD---MFVTGSYDHTVKLWDVRVENSKSVMEVNH--------- 221 (532)
Q Consensus 163 wd~~~~~~~~~~~~--~~-------~~v~~i~~~~~~~~---~l~s~s~dg~i~iwd~~~~~~~~~~~~~~--------- 221 (532)
+|..+++.+..+.. |. .+.....+.. ++. .++.++.+|.++++|..+++.........
T Consensus 275 lD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~ 353 (668)
T 1kv9_A 275 IRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI-DGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDL 353 (668)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECT
T ss_pred EcCCCCceeeEeecCCCccccccCCCCcEEEEecc-CCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccc
Confidence 99999998887753 22 2222233333 454 68899999999999998877653222110
Q ss_pred --CCcE------------------------EEEEEecCCCEEEEE-----------------------------------
Q 038802 222 --GKPI------------------------EDVMFLPSGGLIATA----------------------------------- 240 (532)
Q Consensus 222 --~~~v------------------------~~i~~~~~~~~l~~~----------------------------------- 240 (532)
..++ ..++++|+..++...
T Consensus 354 ~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~ 433 (668)
T 1kv9_A 354 ATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPA 433 (668)
T ss_dssp TTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCG
T ss_pred ccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCC
Confidence 0111 126777776655431
Q ss_pred -c-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecCCCee
Q 038802 241 -G-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLM 318 (532)
Q Consensus 241 -~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~ 318 (532)
. +|.|..||+.++ +.+.....+. ......+... +.+++.++.||.++.||..+++.+..++....+.
T Consensus 434 ~~~~g~l~A~D~~tG-~~~W~~~~~~-~~~~~~~~t~---------gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~ 502 (668)
T 1kv9_A 434 AVVSGALLAWDPVKQ-KAAWKVPYPT-HWNGGTLSTA---------GNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIV 502 (668)
T ss_dssp GGCEEEEEEEETTTT-EEEEEEEESS-SCCCCEEEET---------TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred CCccceEEEEeCCCC-cEEEEccCCC-CCcCceeEeC---------CCEEEEECCcccchhhhhhcChhheEecCCCCcc
Confidence 1 377999999887 6655544322 2222233333 5678889999999999999999999888554332
Q ss_pred --EEEEecCCC-EEEEEe
Q 038802 319 --SVAFSPDCM-TRVIGT 333 (532)
Q Consensus 319 --~~~~s~~~~-~l~~g~ 333 (532)
-+.+..+|+ ++++++
T Consensus 503 ~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 503 AAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp SCCEEEEETTEEEEEEEE
T ss_pred cCceEEEECCEEEEEEEe
Confidence 344456776 444443
No 247
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.98 E-value=3e-07 Score=82.94 Aligned_cols=204 Identities=9% Similarity=-0.019 Sum_probs=137.6
Q ss_pred ceEEEecCCCC--CEEEEEeecCCCcEEEEEeC--CCeEEEEECCCCeEEEeccCCCC-ceEEEEEeCCCCCEEEEEeCC
Q 038802 126 TPLRRLKSHTR--PVRFVKYPFLDKLHLVSGGD--DGIVKFWDVAGESVVLDLFGHKD-YVRCGDCSPVNGDMFVTGSYD 200 (532)
Q Consensus 126 ~~~~~~~~h~~--~i~~~~~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~-~v~~i~~~~~~~~~l~s~s~d 200 (532)
+.+.++. |.. ....+.|++ ++.++++.+. ++.|.++|+.+++.+..+..... ....+++. .+.+.++.-.+
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~ 85 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTC
T ss_pred eEEEEEE-CCCCCCcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecC
Confidence 3455554 443 358899998 6654444443 68999999999998887643222 22345554 23455555568
Q ss_pred CeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCC--Cc---ceEEEEEec
Q 038802 201 HTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESH--NK---TVTSVCVGR 274 (532)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~--~~---~i~~~~~~~ 274 (532)
+.+.++|..+.+....+..+... ...++++|+.++.+. ++.|.++|..+. +....+.-. .. ..+.+.+.
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~-~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMKD---GWGLATDGKILYGSDGTSILYEIDPHTF-KLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSSS---CCEEEECSSSEEEECSSSEEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE-
T ss_pred CEEEEEECCCCcEEEEEECCCCC---eEEEEECCCEEEEECCCCeEEEEECCCC-cEEEEEEECCCCcccccceeEEEE-
Confidence 89999999886665555443111 233556777666555 789999999886 555554421 11 35677777
Q ss_pred cCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecC--------------CCeeEEEEecCCCE-EEEEecCCcEE
Q 038802 275 VGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFP--------------APLMSVAFSPDCMT-RVIGTSNGTIF 339 (532)
Q Consensus 275 ~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~s~~~~~-l~~g~~dg~i~ 339 (532)
+ +..++....++.|.+.|..+++++..+... ...+.++|+|+++. ++++...+.|+
T Consensus 161 d---------g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~ 231 (266)
T 2iwa_A 161 N---------GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLF 231 (266)
T ss_dssp T---------TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred C---------CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEE
Confidence 4 445555556889999999999999988743 24589999999865 55666788999
Q ss_pred EEeecCcc
Q 038802 340 AGRRKKKE 347 (532)
Q Consensus 340 iw~~~~~~ 347 (532)
+.++.+..
T Consensus 232 ~i~l~~~~ 239 (266)
T 2iwa_A 232 EIKLHLVR 239 (266)
T ss_dssp EEEEEECC
T ss_pred EEEEeccc
Confidence 99987653
No 248
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.96 E-value=1.5e-06 Score=92.99 Aligned_cols=277 Identities=13% Similarity=0.067 Sum_probs=175.1
Q ss_pred ccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEee--------------ccCceeEEEEEccCCCEEEEEcCCCC
Q 038802 51 VSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAIS--------------SFKDVVTCSSFRPDGSLLAASDLSGL 116 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~l~~g~~dg~ 116 (532)
...|.++...++|. +..|+..+-|.++|..+........ .....|.++...++|. |..|+.++-
T Consensus 257 ~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~G 334 (781)
T 3v9f_A 257 SSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGG 334 (781)
T ss_dssp CCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSC
T ss_pred CceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCe
Confidence 45699999988875 6667775678899987654322111 1346799999888875 666776677
Q ss_pred EEEEECCCCceEEEec---------CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec---cCCCCceEEE
Q 038802 117 IQVFDVKSRTPLRRLK---------SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL---FGHKDYVRCG 184 (532)
Q Consensus 117 i~iwd~~~~~~~~~~~---------~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~~~v~~i 184 (532)
|..++..++....... .....|.++...+ ++ .|..|+.++-|..||..++...... ......|.++
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i 412 (781)
T 3v9f_A 335 INFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-QG-KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCS 412 (781)
T ss_dssp EEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT-TS-CEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEE
T ss_pred EEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC-CC-CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEE
Confidence 8899877654322210 1235688888765 44 4777887777999998755432211 1234678888
Q ss_pred EEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEE-ecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEccCC
Q 038802 185 DCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVME-VNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESH 263 (532)
Q Consensus 185 ~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~ 263 (532)
...+ ++.+ ..|+.++-+..+|..+++...... ......|.++...++|.+.++.. +.+..||..++ .........
T Consensus 413 ~~d~-~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~-~~~~~~~~~ 488 (781)
T 3v9f_A 413 LKDS-EGNL-WFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASK-KVIHHYDTS 488 (781)
T ss_dssp EECT-TSCE-EEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSS-SCCEEECTT
T ss_pred EECC-CCCE-EEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCC-eEEecccCc
Confidence 8776 5554 447776778999876543221111 01346789999888887666655 67889997764 222211111
Q ss_pred -----CcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee----cCCCeeEEEEecCCCEEEEEec
Q 038802 264 -----NKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR----FPAPLMSVAFSPDCMTRVIGTS 334 (532)
Q Consensus 264 -----~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~g~~ 334 (532)
...|.++...+++ .+..|+.++-+..||..+.+...... ....|.++...++|...++ +.
T Consensus 489 ~~~~~~~~i~~i~~d~~g----------~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~-T~ 557 (781)
T 3v9f_A 489 NSQLLENFVRSIAQDSEG----------RFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLA-TG 557 (781)
T ss_dssp TSSCSCSCEEEEEECTTC----------CEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEE-ET
T ss_pred ccccccceeEEEEEcCCC----------CEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEE-EC
Confidence 3568888887763 35666664557789987766443221 1346889998888876554 44
Q ss_pred CCcEEEEeecCc
Q 038802 335 NGTIFAGRRKKK 346 (532)
Q Consensus 335 dg~i~iw~~~~~ 346 (532)
+|.|..|+..++
T Consensus 558 ~Glv~~~d~~~~ 569 (781)
T 3v9f_A 558 EGLVCFPSARNF 569 (781)
T ss_dssp TEEEEESCTTTC
T ss_pred CCceEEECCCCC
Confidence 676588877654
No 249
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.96 E-value=4e-07 Score=93.11 Aligned_cols=273 Identities=11% Similarity=0.023 Sum_probs=168.2
Q ss_pred CCeEEEEEeCCeEEEEeCCCceEEEEeeccCcee---------EEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecC
Q 038802 63 TSHLFAATHSASLTLFSSQTLEKHSAISSFKDVV---------TCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKS 133 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v---------~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 133 (532)
+..+++++.++.|.-+|..+|+.+-.+....... ..+++ .+..+++++.|+.+..+|..+|+.+.....
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 3457777765569999999999988775432210 11222 345778888899999999999998877653
Q ss_pred CCC----CEE-EEEeec--CCCc-EEEEEe------CCCeEEEEECCCCeEEEeccCCCCc-------------------
Q 038802 134 HTR----PVR-FVKYPF--LDKL-HLVSGG------DDGIVKFWDVAGESVVLDLFGHKDY------------------- 180 (532)
Q Consensus 134 h~~----~i~-~~~~~~--~~~~-~l~s~s------~dg~i~iwd~~~~~~~~~~~~~~~~------------------- 180 (532)
... .+. .-.... .++. .+++++ .++.|..+|..+++.+.........
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence 220 111 011111 0122 566654 3789999999999987755321100
Q ss_pred ----------------------eEEEEEeCCCCCEEEEEeC--------------------C----CeEEEEEcccCCce
Q 038802 181 ----------------------VRCGDCSPVNGDMFVTGSY--------------------D----HTVKLWDVRVENSK 214 (532)
Q Consensus 181 ----------------------v~~i~~~~~~~~~l~s~s~--------------------d----g~i~iwd~~~~~~~ 214 (532)
-..+++.| ....++.++. | +.|..+|..+++..
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~-~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~ 304 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDA-ETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK 304 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEET-TTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred CCCccccccccccccccCCccccCCceEcC-CCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence 01345666 5566666553 2 58999999997766
Q ss_pred eEEEec-CC--------CcEEEEEEe-cCCC---EEEEEc-CCeEEEEEccCCCeeeEEccCCC--cceE----------
Q 038802 215 SVMEVN-HG--------KPIEDVMFL-PSGG---LIATAG-GNSVKIWDLIGGGKMVYSMESHN--KTVT---------- 268 (532)
Q Consensus 215 ~~~~~~-~~--------~~v~~i~~~-~~~~---~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~--~~i~---------- 268 (532)
-.+... |. .++. +... .+|+ .++.++ +|.++++|..++ +.+....... ....
T Consensus 305 W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG-~~lw~~~~~~~~~~~~~~~~~~g~p~ 382 (582)
T 1flg_A 305 WFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNG-KLQNAFPFVDNITWASHIDLKTGRPV 382 (582)
T ss_dssp EEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTC-CEEEEEESSSCCCSEEEECTTTCCEE
T ss_pred EEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCC-CEecccccccCccccccccccCCCEe
Confidence 555443 21 1221 1221 4664 666676 899999998887 5554433221 0000
Q ss_pred ---------------------------------EEEEeccCCCCCccccccEEEEEe-----------------------
Q 038802 269 ---------------------------------SVCVGRVGNESGEEAMQYRILSVA----------------------- 292 (532)
Q Consensus 269 ---------------------------------~~~~~~~~~~~~~~~~~~~l~s~~----------------------- 292 (532)
.++++|. ..++++..
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~---------~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~ 453 (582)
T 1flg_A 383 EREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQD---------TGLFYVPANHWKEDYWTEEVSYTKGSAYLGM 453 (582)
T ss_dssp ECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTT---------TCCEEEEEECEEEEEEECCCCCCTTSCCCCE
T ss_pred EccccCCccccccccCCCceEECcCCccccCCCCceECCC---------CCEEEEechhcceeeecccccccCCCceecc
Confidence 1122222 12222221
Q ss_pred ----------cCCeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 293 ----------LDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 293 ----------~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
.+|.|.-||+.+++.+.......++..-.....+..++.|+.||.++.||..+++.+
T Consensus 454 ~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 454 GFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp EEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 368899999999999988776555544334445678888999999999999998876
No 250
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.95 E-value=9.9e-08 Score=94.96 Aligned_cols=232 Identities=11% Similarity=0.090 Sum_probs=156.4
Q ss_pred CCCCeEEEEEe-CCeEEEEeCCCceEEEEeecc-CceeEEEEE-c-cCCCEEEEEc------------------CCCCEE
Q 038802 61 PTTSHLFAATH-SASLTLFSSQTLEKHSAISSF-KDVVTCSSF-R-PDGSLLAASD------------------LSGLIQ 118 (532)
Q Consensus 61 p~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~l~~g~------------------~dg~i~ 118 (532)
+||+++++... +++|.+.|+.+.+....+.-. ......+++ + |+++++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 48888888665 458999999999988855432 245778887 5 8999999884 245799
Q ss_pred EEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCC--------------------------------------eE
Q 038802 119 VFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDG--------------------------------------IV 160 (532)
Q Consensus 119 iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg--------------------------------------~i 160 (532)
++|.++.+...++.-.. ....++++| ++.++++.+.+. .|
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 99999988888776322 345677888 788888877543 36
Q ss_pred EEEECCC--CeE-EEeccCCCCceEEEEEeCCCCCEEEEEe-CCCeEEEEEcccCCc----------eeEEEecCCCcEE
Q 038802 161 KFWDVAG--ESV-VLDLFGHKDYVRCGDCSPVNGDMFVTGS-YDHTVKLWDVRVENS----------KSVMEVNHGKPIE 226 (532)
Q Consensus 161 ~iwd~~~--~~~-~~~~~~~~~~v~~i~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~----------~~~~~~~~~~~v~ 226 (532)
.+.|..+ ++. +..+... ....++.++| +++++++++ .+.+|.++|+.+.+. .......-+....
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~ 334 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIA-NNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPL 334 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEE-SSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEE
T ss_pred EEEeCcccCCceeEEEEecC-CCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcc
Confidence 6666665 333 3333221 2344789999 888666554 578999999986321 1233445567788
Q ss_pred EEEEecCCCEEEEE-c-CCeEEEEEccCC---------CeeeEEccCCCcceE-----EEEEeccCCCCCccccccEEEE
Q 038802 227 DVMFLPSGGLIATA-G-GNSVKIWDLIGG---------GKMVYSMESHNKTVT-----SVCVGRVGNESGEEAMQYRILS 290 (532)
Q Consensus 227 ~i~~~~~~~~l~~~-~-d~~i~iwd~~~~---------~~~~~~~~~~~~~i~-----~~~~~~~~~~~~~~~~~~~l~s 290 (532)
.++|+|+| .+.+. . |+.|.+||+... ...+..+..|..+-. ++.++|+ +++|++
T Consensus 335 h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~D---------Gk~l~~ 404 (595)
T 1fwx_A 335 HTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDAT---------NDWLVC 404 (595)
T ss_dssp EEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCC---------SSEEEE
T ss_pred eEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCC---------CCEEEE
Confidence 99999999 55444 4 899999998761 256666666654321 1133455 677777
Q ss_pred Eec---CCe----------EEEEECCCce
Q 038802 291 VAL---DGY----------MKVFDYGKMK 306 (532)
Q Consensus 291 ~~~---dg~----------i~iwd~~~~~ 306 (532)
+.. |+. -.++|+..++
T Consensus 405 ~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 405 LSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp EESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred cCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 654 332 2788987544
No 251
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.94 E-value=4.6e-07 Score=92.46 Aligned_cols=260 Identities=12% Similarity=0.148 Sum_probs=157.8
Q ss_pred EEEcCCCCe----EEEEEeCCeEEEEeCCCceEEEEeeccCc----eeEE-EEEccCCCEEEEEc------CCCCEEEEE
Q 038802 57 IVFSPTTSH----LFAATHSASLTLFSSQTLEKHSAISSFKD----VVTC-SSFRPDGSLLAASD------LSGLIQVFD 121 (532)
Q Consensus 57 i~~sp~~~~----l~~~~~d~~v~i~~~~~~~~~~~~~~~~~----~v~~-~~~~~~~~~l~~g~------~dg~i~iwd 121 (532)
++++|.+.. +++++.|+.|.-+|..+|+.+........ .+++ -.+ .++ .+++++ .+|.|+.+|
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D 188 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYD 188 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEE
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEE
Confidence 445444445 88888899999999999998877643220 1221 111 144 455554 379999999
Q ss_pred CCCCceEEEecCCCCC-------------------------------------E-EEEEeecCCCcEEEEEeCC------
Q 038802 122 VKSRTPLRRLKSHTRP-------------------------------------V-RFVKYPFLDKLHLVSGGDD------ 157 (532)
Q Consensus 122 ~~~~~~~~~~~~h~~~-------------------------------------i-~~~~~~~~~~~~l~s~s~d------ 157 (532)
..+++.+..+...... + ...++.+ ....++.++.+
T Consensus 189 ~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~-~~g~vy~g~g~~~p~~~ 267 (599)
T 1w6s_A 189 VKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDP-GTNLIYFGTGNPAPWNE 267 (599)
T ss_dssp TTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCG
T ss_pred CCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeC-CCCEEEEeCCCCccccC
Confidence 9999988776532111 0 1345556 55667766654
Q ss_pred ----------CeEEEEECCCCeEEEeccCCC----------CceEEEEEe-CCCC---CEEEEEeCCCeEEEEEcccCCc
Q 038802 158 ----------GIVKFWDVAGESVVLDLFGHK----------DYVRCGDCS-PVNG---DMFVTGSYDHTVKLWDVRVENS 213 (532)
Q Consensus 158 ----------g~i~iwd~~~~~~~~~~~~~~----------~~v~~i~~~-~~~~---~~l~s~s~dg~i~iwd~~~~~~ 213 (532)
+.|..+|.++++.+..+.... .++. +... . ++ ..++.++.+|.+.++|.++++.
T Consensus 268 ~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 268 TMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDK-DGKARKLLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp GGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECT-TSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred cccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-Eecccc-CCcEEEEEEEECCCcEEEEEECCCCCE
Confidence 489999999999887765321 1221 2222 2 56 5678889999999999988766
Q ss_pred eeEEEecC------------CCcE--------------------------EEEEEecCCCEEEEEc--------------
Q 038802 214 KSVMEVNH------------GKPI--------------------------EDVMFLPSGGLIATAG-------------- 241 (532)
Q Consensus 214 ~~~~~~~~------------~~~v--------------------------~~i~~~~~~~~l~~~~-------------- 241 (532)
.-...... ..++ ..++++|+..++++..
T Consensus 346 lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 425 (599)
T 1w6s_A 346 VSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPY 425 (599)
T ss_dssp EEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCC
T ss_pred eecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccc
Confidence 54433211 1111 2456777666554431
Q ss_pred --------------------------CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCC
Q 038802 242 --------------------------GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDG 295 (532)
Q Consensus 242 --------------------------d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg 295 (532)
.|.+..||+.++ +.+..... ..+...-.+... +.+++.++.||
T Consensus 426 ~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG-~~~W~~~~-~~~~~~g~~~ta---------gg~vf~gt~dg 494 (599)
T 1w6s_A 426 KAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITG-DYKWEKME-RFAVWGGTMATA---------GDLVFYGTLDG 494 (599)
T ss_dssp CTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTC-CEEEEEEE-SSCCCSBCEEET---------TTEEEEECTTS
T ss_pred cCCcceecccceeccCCcCCcccCCCcCeEEEEECCCC-CEEeEecC-CCCccCcceEec---------CCEEEEECCCC
Confidence 246777777666 44433321 111111011111 45788899999
Q ss_pred eEEEEECCCceEEEeeecCCCee--EEEEecCCCE-EEEE
Q 038802 296 YMKVFDYGKMKVTHSMRFPAPLM--SVAFSPDCMT-RVIG 332 (532)
Q Consensus 296 ~i~iwd~~~~~~~~~~~~~~~v~--~~~~s~~~~~-l~~g 332 (532)
.++.||.++++.+..++....+. -+.+..+|+. +++.
T Consensus 495 ~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 495 YLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIY 534 (599)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred eEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEE
Confidence 99999999999999988554332 2455677764 4433
No 252
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.94 E-value=7.4e-07 Score=91.08 Aligned_cols=254 Identities=15% Similarity=0.158 Sum_probs=156.2
Q ss_pred CCeEEEEEeCCeEEEEeCCCceEEEEeeccCc----eeEE-EEEcc---CCC-EEEEEc------CCCCEEEEECCCCce
Q 038802 63 TSHLFAATHSASLTLFSSQTLEKHSAISSFKD----VVTC-SSFRP---DGS-LLAASD------LSGLIQVFDVKSRTP 127 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~----~v~~-~~~~~---~~~-~l~~g~------~dg~i~iwd~~~~~~ 127 (532)
+..+++++.++.|.-+|..+|+.+........ .+.+ -.+.. +|+ .+++++ .+|.|..+|..+++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 44678888899999999999998877654321 1111 11111 233 566654 378999999999988
Q ss_pred EEEecCCCCCE-----------------------------------------EEEEeecCCCcEEEEEeC----------
Q 038802 128 LRRLKSHTRPV-----------------------------------------RFVKYPFLDKLHLVSGGD---------- 156 (532)
Q Consensus 128 ~~~~~~h~~~i-----------------------------------------~~~~~~~~~~~~l~s~s~---------- 156 (532)
+.........+ ...+++| ....++.++.
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~-~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDA-ETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEET-TTTEEEEEECCBSSSCGGGG
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcC-CCCEEEEeCCCCCcccCccc
Confidence 77654221110 1245566 5556666553
Q ss_pred ----------C----CeEEEEECCCCeEEEeccC--CC--------CceEEEEEe-CCCC---CEEEEEeCCCeEEEEEc
Q 038802 157 ----------D----GIVKFWDVAGESVVLDLFG--HK--------DYVRCGDCS-PVNG---DMFVTGSYDHTVKLWDV 208 (532)
Q Consensus 157 ----------d----g~i~iwd~~~~~~~~~~~~--~~--------~~v~~i~~~-~~~~---~~l~s~s~dg~i~iwd~ 208 (532)
| +.|..+|..+++.+..+.. |. .++. +... . ++ ..++.++.+|.++++|.
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~-~G~~~~~v~~~~~~G~l~~lD~ 353 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAK-DGKIVKATAHADRNGFFYVVDR 353 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECS-SSCEEEEEEEECTTSEEEEEET
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecC-CCCEEEEEEEECCCceEEEEEC
Confidence 2 6899999999999887643 32 1221 2221 2 55 37888999999999999
Q ss_pred ccCCceeEEEecC------------CCcE--------------------------------EEEEEecCCCEEEEEc---
Q 038802 209 RVENSKSVMEVNH------------GKPI--------------------------------EDVMFLPSGGLIATAG--- 241 (532)
Q Consensus 209 ~~~~~~~~~~~~~------------~~~v--------------------------------~~i~~~~~~~~l~~~~--- 241 (532)
.+++..-...... ..++ ..++++|+..++++..
T Consensus 354 ~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~ 433 (582)
T 1flg_A 354 SNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHW 433 (582)
T ss_dssp TTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECE
T ss_pred CCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhc
Confidence 8876554433221 0000 1345666544443321
Q ss_pred -------------------------------CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEE
Q 038802 242 -------------------------------GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILS 290 (532)
Q Consensus 242 -------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s 290 (532)
+|.|..||+.++ +.+.+..... .+..-..... +.+++.
T Consensus 434 ~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG-~~~W~~~~~~-~~~~g~~~ta---------gglvf~ 502 (582)
T 1flg_A 434 KEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSG-KVVWEHKEHL-PLWAGVLATA---------GNLVFT 502 (582)
T ss_dssp EEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTC-CEEEEEEESS-CCCSCCEEET---------TTEEEE
T ss_pred ceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCC-CEEEEecCCC-CCcccceEeC---------CCEEEE
Confidence 467888888877 4444433221 1111111111 457888
Q ss_pred EecCCeEEEEECCCceEEEeeecCCCeeE--EEEecCCCEEE
Q 038802 291 VALDGYMKVFDYGKMKVTHSMRFPAPLMS--VAFSPDCMTRV 330 (532)
Q Consensus 291 ~~~dg~i~iwd~~~~~~~~~~~~~~~v~~--~~~s~~~~~l~ 330 (532)
++.||.++.||.++++.+..++.+..+.+ +.+..+|+..+
T Consensus 503 g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 503 GTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 99999999999999999999987666544 66777886433
No 253
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.90 E-value=2.5e-07 Score=94.51 Aligned_cols=253 Identities=14% Similarity=0.128 Sum_probs=156.1
Q ss_pred CCeEEEEEeCCeEEEEeCCCceEEEEeeccC----ceeEEEEEccCCCEEEEEcC------CCCEEEEECCCCceEEEec
Q 038802 63 TSHLFAATHSASLTLFSSQTLEKHSAISSFK----DVVTCSSFRPDGSLLAASDL------SGLIQVFDVKSRTPLRRLK 132 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~g~~------dg~i~iwd~~~~~~~~~~~ 132 (532)
+..+++++.|+.+..+|..+++.+....... ..+.+--.-.++ .+++++. +|.|..+|..+++.+..+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 4467788889999999999999887764321 012110001144 5555554 7899999999999887765
Q ss_pred CCCCC-------------------------------------E-EEEEeecCCCcEEEEEeCC----------------C
Q 038802 133 SHTRP-------------------------------------V-RFVKYPFLDKLHLVSGGDD----------------G 158 (532)
Q Consensus 133 ~h~~~-------------------------------------i-~~~~~~~~~~~~l~s~s~d----------------g 158 (532)
..... + ..+++.+ ....++.++.+ +
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~-~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDP-KLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcC-CCCeEEEECCCCccccCCccCCCceeEE
Confidence 32110 0 1245666 44556665532 3
Q ss_pred eEEEEECCCCeEEEeccC--CC--------CceEEEEEeCCCC---CEEEEEeCCCeEEEEEcccCCceeEEEecC----
Q 038802 159 IVKFWDVAGESVVLDLFG--HK--------DYVRCGDCSPVNG---DMFVTGSYDHTVKLWDVRVENSKSVMEVNH---- 221 (532)
Q Consensus 159 ~i~iwd~~~~~~~~~~~~--~~--------~~v~~i~~~~~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---- 221 (532)
.|..+|..+++.+..+.. |. .++. +.... ++ ..++.++.+|.+.++|..+++..-......
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w 350 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPV-NGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNV 350 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEE-TTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-Eeccc-CCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccc
Confidence 699999999998877643 21 2221 22223 45 367788899999999998876654443322
Q ss_pred --------CCcE--------------------------EEEEEecCCCEEEEEc--------------------------
Q 038802 222 --------GKPI--------------------------EDVMFLPSGGLIATAG-------------------------- 241 (532)
Q Consensus 222 --------~~~v--------------------------~~i~~~~~~~~l~~~~-------------------------- 241 (532)
..++ ..++++|+..+++...
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccce
Confidence 1122 2457788766665542
Q ss_pred ------------CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEE
Q 038802 242 ------------GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTH 309 (532)
Q Consensus 242 ------------d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 309 (532)
++.+..||+.++ +.+.+.... ..+.+..+... +..++.++.||.|+.||..+++.+.
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~tG-~~~W~~~~~-~~~~~~~~~t~---------gg~v~~g~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTTG-KAKWTKWEK-FAAWGGTLYTK---------GGLVWYATLDGYLKALDNKDGKELW 499 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTTC-CEEEEEEES-SCCCSBCEEET---------TTEEEEECTTSEEEEEETTTCCEEE
T ss_pred eccCccccCCCCCCeEEEEECCCC-CEEEEecCC-CCccceeEEEC---------CCEEEEEcCCCeEEEEECCCCCEEE
Confidence 367888888776 444444321 11222222222 4567779999999999999999999
Q ss_pred eeecCCCeeE--EEEecCCCEEE
Q 038802 310 SMRFPAPLMS--VAFSPDCMTRV 330 (532)
Q Consensus 310 ~~~~~~~v~~--~~~s~~~~~l~ 330 (532)
.++....+.+ +.+..+|+.++
T Consensus 500 ~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 500 NFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp EEECSSCCCSCCEEEEETTEEEE
T ss_pred EEeCCCCcEeeeEEEEECCEEEE
Confidence 9885544432 33556775443
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.87 E-value=2.6e-06 Score=80.44 Aligned_cols=233 Identities=9% Similarity=0.001 Sum_probs=143.5
Q ss_pred eeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecC--------------------CCCCEEEEEeecCCCcEEEEE
Q 038802 95 VVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKS--------------------HTRPVRFVKYPFLDKLHLVSG 154 (532)
Q Consensus 95 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--------------------h~~~i~~~~~~~~~~~~l~s~ 154 (532)
...+++|.+++++++++..++.|..|+..++... .+.. ....+..+++.+ +...|+.+
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~-~~g~l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL-QNNQLYIV 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET-TTTEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcC-CCCcEEEE
Confidence 4567889999988888888999999998765432 2210 013578899986 34456666
Q ss_pred eCCCeEEEEECCCCeEEEec---cC-CCCceEEEEEeCCCCCEEEEEeC-----------------CCeEEEEEcccCCc
Q 038802 155 GDDGIVKFWDVAGESVVLDL---FG-HKDYVRCGDCSPVNGDMFVTGSY-----------------DHTVKLWDVRVENS 213 (532)
Q Consensus 155 s~dg~i~iwd~~~~~~~~~~---~~-~~~~v~~i~~~~~~~~~l~s~s~-----------------dg~i~iwd~~~~~~ 213 (532)
...+.|..+|..++...... .+ .......+++.+.+++++++... ++.|..||..++..
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 55666888997765422111 11 11346778887634566555432 36788888765432
Q ss_pred eeEEEecCCCcEEEEEEecCCCEEEEE-c-CCeEEEEEccCCC----eeeEEccCCCcceEEEEEeccCCCCCccccccE
Q 038802 214 KSVMEVNHGKPIEDVMFLPSGGLIATA-G-GNSVKIWDLIGGG----KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYR 287 (532)
Q Consensus 214 ~~~~~~~~~~~v~~i~~~~~~~~l~~~-~-d~~i~iwd~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 287 (532)
.... ........++++|+++.|..+ . .+.|.+|++.... ...... .+ ...+++.++ +.+
T Consensus 178 ~~~~--~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~---~g-P~gi~~d~~---------G~l 242 (322)
T 2fp8_A 178 TLLL--KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI---PN-PGNIKRNAD---------GHF 242 (322)
T ss_dssp EEEE--EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC---SS-EEEEEECTT---------SCE
T ss_pred EEec--cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC---CC-CCCeEECCC---------CCE
Confidence 2221 112334678999999866555 3 6899999987421 122222 22 677888887 445
Q ss_pred EEEEec----------CCeEEEEECCCceEEEeeecC-----CCeeEEEEecCCCEEEEEecCCcEEEEeecCc
Q 038802 288 ILSVAL----------DGYMKVFDYGKMKVTHSMRFP-----APLMSVAFSPDCMTRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 288 l~s~~~----------dg~i~iwd~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~ 346 (532)
.++... .+.|..+|.. ++.+..+..+ ..++++++ .+++..++...++.|..+++...
T Consensus 243 ~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 243 WVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred EEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 555433 4678888864 6777666533 34677776 45666666667788999887643
No 255
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.87 E-value=1e-05 Score=86.44 Aligned_cols=274 Identities=13% Similarity=0.044 Sum_probs=172.6
Q ss_pred cCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEee-------ccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC
Q 038802 52 SSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAIS-------SFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS 124 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 124 (532)
..|.++...+++. +.+|+.+ -+.+||..+++...... .....|.++...++|. |..|+..+-|.++|..+
T Consensus 211 ~~i~~i~~d~~g~-lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~ 287 (781)
T 3v9f_A 211 NDVRCIYKDTNGN-IWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQ 287 (781)
T ss_dssp SSEEEEEECTTCC-EEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTC
T ss_pred CceeEEEEcCCCC-EEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCC
Confidence 5688999888886 5556665 68999987665432211 1245799998888775 55566545688999876
Q ss_pred CceEEEec--------------CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec---------cCCCCce
Q 038802 125 RTPLRRLK--------------SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL---------FGHKDYV 181 (532)
Q Consensus 125 ~~~~~~~~--------------~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---------~~~~~~v 181 (532)
+....... .....|.++...+ ++ .|..|+.++-|..++..+....... ......|
T Consensus 288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 365 (781)
T 3v9f_A 288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FN-NIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVV 365 (781)
T ss_dssp C---------CEEECBCSSTTSBSSSCEEEEEECS-SC-CEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCE
T ss_pred CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CC-CEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcce
Confidence 54322111 1345788988876 55 4777888888999998765432221 1123568
Q ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEE--ecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEE
Q 038802 182 RCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVME--VNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYS 259 (532)
Q Consensus 182 ~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~ 259 (532)
.++...+ ++. +..|+.++-+..||..+........ ......|.++...++|.+.+...++.+..+|..++ +. ..
T Consensus 366 ~~i~~d~-~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~-~~-~~ 441 (781)
T 3v9f_A 366 SSVCDDG-QGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLK-KF-QI 441 (781)
T ss_dssp EEEEECT-TSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSC-EE-EE
T ss_pred EEEEEcC-CCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCC-cE-EE
Confidence 8888876 555 5566666668899876532221110 12346789999888888777655678899997665 32 22
Q ss_pred cc---CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeec------CCCeeEEEEecCCCEEE
Q 038802 260 ME---SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRF------PAPLMSVAFSPDCMTRV 330 (532)
Q Consensus 260 ~~---~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~ 330 (532)
+. .....|.++...+++ .+..|+. +-|..||..+++....... ...|.++...++|.+.+
T Consensus 442 ~~~~~~~~~~v~~i~~d~~g----------~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi 510 (781)
T 3v9f_A 442 IELEKNELLDVRVFYEDKNK----------KIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI 510 (781)
T ss_dssp CCSTTTCCCCEEEEEECTTS----------EEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE
T ss_pred eccCCCCCCeEEEEEECCCC----------CEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE
Confidence 22 234578888877663 3555665 5688999887654333221 35789999999887665
Q ss_pred EEecCCcEEEEeecCc
Q 038802 331 IGTSNGTIFAGRRKKK 346 (532)
Q Consensus 331 ~g~~dg~i~iw~~~~~ 346 (532)
|+.++-|..|+..+.
T Consensus 511 -gt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 511 -GTFGGGVGIYTPDMQ 525 (781)
T ss_dssp -EESSSCEEEECTTCC
T ss_pred -EEcCCCEEEEeCCCC
Confidence 444344666776543
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.87 E-value=4.6e-06 Score=78.13 Aligned_cols=216 Identities=13% Similarity=0.052 Sum_probs=130.7
Q ss_pred cCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCC--CEEEEECCCCceEE
Q 038802 52 SSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSG--LIQVFDVKSRTPLR 129 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg--~i~iwd~~~~~~~~ 129 (532)
.....++|++++..+++-..++.|..||.... ....+. ....+.++++.++|+++++..... .|..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 45678999999985555446789999997753 333332 245788999999999666554332 46677777776543
Q ss_pred EecC-CCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeE-EEec---------cCCCCceEEEEEeCCCCC-EEEEE
Q 038802 130 RLKS-HTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESV-VLDL---------FGHKDYVRCGDCSPVNGD-MFVTG 197 (532)
Q Consensus 130 ~~~~-h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~-~~~~---------~~~~~~v~~i~~~~~~~~-~l~s~ 197 (532)
.... .......++..+ ++..+++...++.|.++|..++.. +... ...-.....+ ++ ++. ++++-
T Consensus 110 ~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~-dg~~lyv~d 185 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR-FGNFLYVSN 185 (306)
T ss_dssp EEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE-ETTEEEEEE
T ss_pred EEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc-CCCEEEEEe
Confidence 2221 222334455444 454455555689999999876532 2110 0111233445 66 665 44555
Q ss_pred eCCCeEEEEEccc-CCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCee--eEEccCCCcceEEEEEe
Q 038802 198 SYDHTVKLWDVRV-ENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKM--VYSMESHNKTVTSVCVG 273 (532)
Q Consensus 198 s~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~--~~~~~~~~~~i~~~~~~ 273 (532)
+..+.|..||+.. +................++++++|+++++.. .+.|.++|.. + +. +..+.......++++|.
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G-~~~~~~~~~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-R-STTIIAQAEQGVIGSTAVAFG 263 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-C-CEEEEECGGGTCTTEEEEEEC
T ss_pred CCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-C-CEEEEeecccccCCceEEEEe
Confidence 5678999999874 2211111111113456789999998877666 6899999965 3 33 22343333567899998
Q ss_pred ---cc
Q 038802 274 ---RV 275 (532)
Q Consensus 274 ---~~ 275 (532)
++
T Consensus 264 g~~~d 268 (306)
T 2p4o_A 264 QTEGD 268 (306)
T ss_dssp CSTTT
T ss_pred cccCC
Confidence 66
No 257
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.86 E-value=1.3e-05 Score=76.48 Aligned_cols=246 Identities=8% Similarity=-0.006 Sum_probs=151.6
Q ss_pred ccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEE-EEcCCCCEEEEECCCCceEE
Q 038802 51 VSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLA-ASDLSGLIQVFDVKSRTPLR 129 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~ 129 (532)
.+..+|.+..++ .+|+.+ ....|+..++........+.. ...+..++|++.+..|+ +-...+.|..++........
T Consensus 33 ~d~~~C~~~~~~-~~ll~~-~~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~ 109 (349)
T 3v64_C 33 PDRRSCKALGPE-PVLLFA-NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE 109 (349)
T ss_dssp TTSSCEEESSSC-CEEEEE-CBSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CCCCcccccccC-ceeEee-cccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceE
Confidence 345567777663 455544 446688888876554444433 34578999997655555 55567889999988665444
Q ss_pred EecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCC-CeEEEEEc
Q 038802 130 RLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYD-HTVKLWDV 208 (532)
Q Consensus 130 ~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~d-g~i~iwd~ 208 (532)
.+.........+++.+.++.++++-...+.|.+.++........+...-.....+++.|.++.++++-... +.|..+++
T Consensus 110 ~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 110 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence 44333344567888874566666767778999999876543333333345568999998455555555555 78888887
Q ss_pred ccCCceeEEEecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCcccccc
Q 038802 209 RVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQY 286 (532)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 286 (532)
...... .+....-.....++++|++..|..+. .+.|..+|+..... ...+.........+++. . +.
T Consensus 190 dG~~~~-~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~-~~~~~~~~~~P~giav~-~---------~~ 257 (349)
T 3v64_C 190 DGSGRR-IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQGLPHPFAITVF-E---------DS 257 (349)
T ss_dssp TSCSCE-ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEE-T---------TE
T ss_pred CCCCcE-EEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-EEEEeCCCCCceEEEEE-C---------CE
Confidence 653222 21112334568999998766665554 57899999865422 22222223345666663 2 34
Q ss_pred EEEEEecCCeEEEEECCCceEEEee
Q 038802 287 RILSVALDGYMKVFDYGKMKVTHSM 311 (532)
Q Consensus 287 ~l~s~~~dg~i~iwd~~~~~~~~~~ 311 (532)
.+++-...+.|..++..+++....+
T Consensus 258 ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 258 LYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp EEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEecCCCCeEEEEEccCCCccEEe
Confidence 5555556777888875555444433
No 258
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.85 E-value=9e-07 Score=78.83 Aligned_cols=188 Identities=10% Similarity=0.024 Sum_probs=126.2
Q ss_pred eEEEecCCCCC--EEEEEeecCCCcEEEEEeCCC--eEEEEECCCCeEEEeccCCCCce-EEEEEeCCCCCEEEEEeCCC
Q 038802 127 PLRRLKSHTRP--VRFVKYPFLDKLHLVSGGDDG--IVKFWDVAGESVVLDLFGHKDYV-RCGDCSPVNGDMFVTGSYDH 201 (532)
Q Consensus 127 ~~~~~~~h~~~--i~~~~~~~~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~v-~~i~~~~~~~~~l~s~s~dg 201 (532)
.+.++. |... ...+.|+ ++.++.+.+.+| .|+++|+.+++.+..+....... -.++.. ++.+.+..-.++
T Consensus 33 vv~~~p-hd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~ 107 (262)
T 3nol_A 33 IVHSYP-HDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNG 107 (262)
T ss_dssp EEEEEE-CCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEEec-CCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCC
Confidence 455553 5443 3778887 567777777766 89999999999988875433321 234443 344444555688
Q ss_pred eEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCC--C---cceEEEEEecc
Q 038802 202 TVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESH--N---KTVTSVCVGRV 275 (532)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~--~---~~i~~~~~~~~ 275 (532)
.+.+||..+.+....+..+.. ...+++++..|+.+. ++.|.++|..+. +.+.++... . ..++.+.+. +
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~e----G~glt~dg~~L~~SdGs~~i~~iDp~T~-~v~~~I~V~~~g~~~~~lNELe~~-~ 181 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDGE----GWGLTHNDQYLIMSDGTPVLRFLDPESL-TPVRTITVTAHGEELPELNELEWV-D 181 (262)
T ss_dssp EEEEEETTTCCEEEEEECSSC----CCCEEECSSCEEECCSSSEEEEECTTTC-SEEEEEECEETTEECCCEEEEEEE-T
T ss_pred EEEEEECccCcEEEEEECCCC----ceEEecCCCEEEEECCCCeEEEEcCCCC-eEEEEEEeccCCccccccceeEEE-C
Confidence 999999998777766665332 223335666666655 778999998877 555554331 2 234456665 3
Q ss_pred CCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecC-------------CCeeEEEEecCCCEEEEEec
Q 038802 276 GNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFP-------------APLMSVAFSPDCMTRVIGTS 334 (532)
Q Consensus 276 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------~~v~~~~~s~~~~~l~~g~~ 334 (532)
+...+..-.++.|.+.|..+++++..+... ...+.+||+|+++.|++.+.
T Consensus 182 ---------G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 182 ---------GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ---------TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ---------CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 445555556889999999999999988742 24588999998877766554
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.85 E-value=2.5e-06 Score=79.95 Aligned_cols=226 Identities=12% Similarity=0.027 Sum_probs=136.4
Q ss_pred ceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCC-C-eEEEEECCCCeEE
Q 038802 94 DVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDD-G-IVKFWDVAGESVV 171 (532)
Q Consensus 94 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~d-g-~i~iwd~~~~~~~ 171 (532)
.....++|+++++++++...++.|..||.... ....+. .......+++.+ +++++++.... + .|..+|..+++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 45678999999997777777899999997753 333332 235688999998 77755554432 2 4777787777653
Q ss_pred Eecc-CCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEE-------e--cCCCcEEEEEEecCCCEEEEEc
Q 038802 172 LDLF-GHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVME-------V--NHGKPIEDVMFLPSGGLIATAG 241 (532)
Q Consensus 172 ~~~~-~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------~--~~~~~v~~i~~~~~~~~l~~~~ 241 (532)
.... ........++..+ ++..+++...++.|..+|...+....... . ..-.....+ +|++..|..+.
T Consensus 109 ~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d 185 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN 185 (306)
T ss_dssp EEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE
T ss_pred EEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe
Confidence 3221 1122234445444 44445555568889999876421111100 0 111233455 78887665554
Q ss_pred --CCeEEEEEccCCCee--eEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEE--eeecC-
Q 038802 242 --GNSVKIWDLIGGGKM--VYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTH--SMRFP- 314 (532)
Q Consensus 242 --d~~i~iwd~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~- 314 (532)
.+.|..||+...+.. ...+.. ......+++.++ +.++++....+.|.++|.. ++... .+..+
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~d---------G~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~ 254 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVE---------GNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGV 254 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTT---------CCEEEECBTTCCEEEECTT-CCEEEEECGGGTC
T ss_pred CCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCC---------CCEEEEeCCCCeEEEECCC-CCEEEEeeccccc
Confidence 679999998642121 111100 123456777777 5566666667889999975 55432 33333
Q ss_pred CCeeEEEEe---cCCCEEEEEecCC
Q 038802 315 APLMSVAFS---PDCMTRVIGTSNG 336 (532)
Q Consensus 315 ~~v~~~~~s---~~~~~l~~g~~dg 336 (532)
..+++++|. |+++.|++++..+
T Consensus 255 ~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 255 IGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TTEEEEEECCSTTTTTEEEEEECTT
T ss_pred CCceEEEEecccCCCCEEEEECCCC
Confidence 568999998 8888887776654
No 260
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.84 E-value=1.4e-06 Score=77.57 Aligned_cols=183 Identities=13% Similarity=0.171 Sum_probs=122.8
Q ss_pred eEEEEeeccC--ceeEEEEEccCCCEEEEEcCCC--CEEEEECCCCceEEEecCCCCCE-EEEEeecCCCcEEEEEeCCC
Q 038802 84 EKHSAISSFK--DVVTCSSFRPDGSLLAASDLSG--LIQVFDVKSRTPLRRLKSHTRPV-RFVKYPFLDKLHLVSGGDDG 158 (532)
Q Consensus 84 ~~~~~~~~~~--~~v~~~~~~~~~~~l~~g~~dg--~i~iwd~~~~~~~~~~~~h~~~i-~~~~~~~~~~~~l~s~s~dg 158 (532)
+.+.++ .|. .....+.|+ ++.+..+.+.+| .|+++|+.+++.+..+....... ..+.+. ++...+..-.++
T Consensus 32 ~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~ 107 (262)
T 3nol_A 32 QIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNG 107 (262)
T ss_dssp EEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCC
Confidence 344555 343 345788898 676666666665 89999999999988876543321 234443 444444555689
Q ss_pred eEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEec-CCCc---EEEEEEecCC
Q 038802 159 IVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVN-HGKP---IEDVMFLPSG 234 (532)
Q Consensus 159 ~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~---v~~i~~~~~~ 234 (532)
.+.+||..+.+.+.++...... ..+++ ++..|+.+..++.|.++|..+.+........ .+.+ ++.+.|. +|
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~eG---~glt~-dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G 182 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDGEG---WGLTH-NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG 182 (262)
T ss_dssp EEEEEETTTCCEEEEEECSSCC---CCEEE-CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEEEEECccCcEEEEEECCCCc---eEEec-CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence 9999999999999888643322 23334 5666666666788999999987766665543 2223 4457776 77
Q ss_pred CEEEEEc-CCeEEEEEccCCCeeeEEccCC------------CcceEEEEEeccC
Q 038802 235 GLIATAG-GNSVKIWDLIGGGKMVYSMESH------------NKTVTSVCVGRVG 276 (532)
Q Consensus 235 ~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~------------~~~i~~~~~~~~~ 276 (532)
.+.+..- ++.|.+.|..++ +.+..+... ....+.++++|++
T Consensus 183 ~lyan~w~~~~I~vIDp~tG-~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETG-KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp EEEEEETTSSEEEEECTTTC-BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred EEEEEEccCCeEEEEECCCC-cEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence 7666655 789999999887 666555431 1345899999984
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.80 E-value=1.6e-05 Score=76.93 Aligned_cols=245 Identities=8% Similarity=-0.002 Sum_probs=151.0
Q ss_pred CeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEE-EEcCCCCEEEEECCCCceEEEe
Q 038802 53 SINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLA-ASDLSGLIQVFDVKSRTPLRRL 131 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~~~ 131 (532)
.-+|.+..+ ..+|+.+ ....|+.+++........+.. ...+..++|.+.+..|+ +-...+.|..++.........+
T Consensus 78 ~~~C~~~~~-~~~l~~~-~~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 78 RRSCKALGP-EPVLLFA-NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 154 (386)
T ss_dssp SSCEEECSS-CCEEEEE-CBSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE
T ss_pred CCeECCccc-cceeEee-cCccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE
Confidence 344555555 3344444 446788888876555444443 34578999997555554 5556788999998866544444
Q ss_pred cCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCC-CeEEEEEccc
Q 038802 132 KSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYD-HTVKLWDVRV 210 (532)
Q Consensus 132 ~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~d-g~i~iwd~~~ 210 (532)
.........+++.+.++.++++-...+.|.+.++........+...-.....+++.|..+.++++-... +.|..+++..
T Consensus 155 ~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 155 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp CSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 333334567888874566666667778899999875543333333345678999998445455554444 7788888765
Q ss_pred CCceeEEEecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEE
Q 038802 211 ENSKSVMEVNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRI 288 (532)
Q Consensus 211 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l 288 (532)
... ..+....-.....++++|++..|..+. .+.|..+|+..... ...+.........+++. . +.++
T Consensus 235 ~~~-~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~P~giav~-~---------~~ly 302 (386)
T 3v65_B 235 SGR-RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQGLPHPFAITVF-E---------DSLY 302 (386)
T ss_dssp CSC-EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-EEEECSSCSSEEEEEEE-T---------TEEE
T ss_pred CCc-EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEECCCCCceEEEEE-C---------CEEE
Confidence 322 222223334568999998666555554 57899999865422 22222223345667773 2 3456
Q ss_pred EEEecCCeEEEEECCCceEEEeee
Q 038802 289 LSVALDGYMKVFDYGKMKVTHSMR 312 (532)
Q Consensus 289 ~s~~~dg~i~iwd~~~~~~~~~~~ 312 (532)
++-...+.|..+|..+++....+.
T Consensus 303 ~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 303 WTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EEETTTTEEEEEETTTCCSCEEEE
T ss_pred EeeCCCCeEEEEECCCCcceEEEc
Confidence 666667888888866665544443
No 262
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.79 E-value=5.4e-06 Score=78.25 Aligned_cols=235 Identities=10% Similarity=0.074 Sum_probs=142.5
Q ss_pred cCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeec-------------------cCceeEEEEEcc-CCCEEEEE
Q 038802 52 SSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISS-------------------FKDVVTCSSFRP-DGSLLAAS 111 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-------------------~~~~v~~~~~~~-~~~~l~~g 111 (532)
....++++++++..++++..++.|..|+..++........ ....+.++++.+ +++ |+++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 3456789999998788888899999999876543321110 013578899997 665 4444
Q ss_pred cCCCCEEEEECCCCceEEEecC-----CCCCEEEEEeecCCCcEEEEEeC-----------------CCeEEEEECCCCe
Q 038802 112 DLSGLIQVFDVKSRTPLRRLKS-----HTRPVRFVKYPFLDKLHLVSGGD-----------------DGIVKFWDVAGES 169 (532)
Q Consensus 112 ~~dg~i~iwd~~~~~~~~~~~~-----h~~~i~~~~~~~~~~~~l~s~s~-----------------dg~i~iwd~~~~~ 169 (532)
...+.|..+|..++.. ..+.. .......+++.+.++.+.++... ++.|..||..+++
T Consensus 98 d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp ETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred ECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 4345588888765532 22211 12346788887623444444322 3779999987776
Q ss_pred EEEeccCCCCceEEEEEeCCCCCEEEEE-eCCCeEEEEEcccCCc--eeEEEecCCCcEEEEEEecCCCEEEEEcC----
Q 038802 170 VVLDLFGHKDYVRCGDCSPVNGDMFVTG-SYDHTVKLWDVRVENS--KSVMEVNHGKPIEDVMFLPSGGLIATAGG---- 242 (532)
Q Consensus 170 ~~~~~~~~~~~v~~i~~~~~~~~~l~s~-s~dg~i~iwd~~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~~~~d---- 242 (532)
....... -.....++++| +++.|+.+ +..+.|..|++..... ...+. .... ...+++.++|++.++...
T Consensus 177 ~~~~~~~-~~~p~gia~~~-dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~~~g-P~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 177 TTLLLKE-LHVPGGAEVSA-DSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-KIPN-PGNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp EEEEEEE-ESCCCEEEECT-TSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE-ECSS-EEEEEECTTSCEEEEEEEETTS
T ss_pred EEEeccC-CccCcceEECC-CCCEEEEEeCCCCeEEEEECCCCcCCccceEE-eCCC-CCCeEECCCCCEEEEecCcccc
Confidence 4332221 12345789999 88755544 5668999999875321 11221 1223 788999999987776543
Q ss_pred -------CeEEEEEccCCCeeeEEccCCC----cceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 243 -------NSVKIWDLIGGGKMVYSMESHN----KTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 243 -------~~i~iwd~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
+.|..+|.. + +.+..+.... ..++++++. + +.++++...++.|..+++..
T Consensus 253 ~~~~~~~~~v~~~d~~-G-~~~~~~~~~~g~~~~~~~~~~~~-~---------g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDEF-G-NILEVIPLPPPFAGEHFEQIQEH-D---------GLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp STTSCEEEEEEEECTT-S-CEEEEEECCTTTTTSCCCEEEEE-T---------TEEEEECSSCSEEEEEEC--
T ss_pred cccCCCccEEEEECCC-C-CEEEEEECCCCCccccceEEEEe-C---------CEEEEeecCCCceEEEeccc
Confidence 467777753 3 5555444322 345556552 3 45566666678888888754
No 263
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.79 E-value=9.3e-07 Score=78.68 Aligned_cols=187 Identities=9% Similarity=0.039 Sum_probs=125.4
Q ss_pred ceEEEecCCCC--CEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCc-eEEEEEeCCCCCEEEEEeCCCe
Q 038802 126 TPLRRLKSHTR--PVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDY-VRCGDCSPVNGDMFVTGSYDHT 202 (532)
Q Consensus 126 ~~~~~~~~h~~--~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-v~~i~~~~~~~~~l~s~s~dg~ 202 (532)
+.+.++. |.. -...+.|+ ++.++.+.+.+|.|+++|+.+++.+..+ -.... --.+++. .+.+.+..-.++.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~--g~~Ly~ltw~~~~ 117 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASD--GERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC--SSCEEEEESSSCE
T ss_pred EEEEEEc-CCCccccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe--CCEEEEEEccCCE
Confidence 3445553 443 34788887 5778888888999999999999887776 22221 1235543 3556666667899
Q ss_pred EEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccC--CCc---ceEEEEEeccC
Q 038802 203 VKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMES--HNK---TVTSVCVGRVG 276 (532)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~--~~~---~i~~~~~~~~~ 276 (532)
+.+||..+.+....+..... -..++ +++..|+.+. ++.|.++|..+. +.+.++.- +.. .++.+.|. +
T Consensus 118 v~V~D~~Tl~~~~ti~~~~e--GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~-~v~~~I~V~~~g~~v~~lNeLe~~-d- 190 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYSGE--GWGLC--YWNGKLVRSDGGTMLTFHEPDGF-ALVGAVQVKLRGQPVELINELECA-N- 190 (268)
T ss_dssp EEEEETTTTEEEEEEECSSC--CCCEE--EETTEEEEECSSSEEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE-T-
T ss_pred EEEEECCcCcEEEEEeCCCc--eeEEe--cCCCEEEEECCCCEEEEEcCCCC-eEEEEEEeCCCCcccccccccEEe-C-
Confidence 99999998766666654322 23444 5667666666 789999998887 55555543 222 34566666 3
Q ss_pred CCCCccccccEEEEEecCCeEEEEECCCceEEEeeecC--------------CCeeEEEEecCCCEEEEEe
Q 038802 277 NESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFP--------------APLMSVAFSPDCMTRVIGT 333 (532)
Q Consensus 277 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~s~~~~~l~~g~ 333 (532)
+..++..-.++.|.+.|..+++++..+... ...+.+|++|+++.|++.+
T Consensus 191 --------G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 191 --------GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp --------TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred --------CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 444555546889999999999999888732 2568899999765544433
No 264
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.77 E-value=4.9e-06 Score=74.56 Aligned_cols=202 Identities=13% Similarity=0.164 Sum_probs=137.7
Q ss_pred CccCccccCeeEEEEcCCCCeEEE-EEeCCeEEEEeCCCceEEEEeecc-CceeEEEEEccCCCEEEEEcCCCCEEEEEC
Q 038802 45 HQIPGLVSSINSIVFSPTTSHLFA-ATHSASLTLFSSQTLEKHSAISSF-KDVVTCSSFRPDGSLLAASDLSGLIQVFDV 122 (532)
Q Consensus 45 ~~~~~h~~~V~~i~~sp~~~~l~~-~~~d~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~ 122 (532)
+.++|-.+.+..++|+|++..|++ ...++.|...|.. ++....+.-. ....-.+++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 466777778999999998776665 5567889999988 8877776432 245778888899887777667788999988
Q ss_pred CCCce---EEEec------CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECC---CCeEEEec-------cCCCCceEE
Q 038802 123 KSRTP---LRRLK------SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVA---GESVVLDL-------FGHKDYVRC 183 (532)
Q Consensus 123 ~~~~~---~~~~~------~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~---~~~~~~~~-------~~~~~~v~~ 183 (532)
..... +.... ........++|+| .++.|+++.......+|.+. ....+..+ ..+...+.+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 65442 22221 2345578999999 66566666655444455443 11111111 113345789
Q ss_pred EEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCC--------CcEEEEEEecCCCEEEEEcCCeEEEEE
Q 038802 184 GDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHG--------KPIEDVMFLPSGGLIATAGGNSVKIWD 249 (532)
Q Consensus 184 i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~--------~~v~~i~~~~~~~~l~~~~d~~i~iwd 249 (532)
++++|..+.+++.+...+.+..+|... +....+....+ ..-..|+|.++|++.+++-.+.++.|.
T Consensus 178 l~~dp~tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFT 250 (255)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEE
T ss_pred EEEcCCCCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEE
Confidence 999997778888888888999999764 44555544322 366899999999977776666666665
No 265
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.74 E-value=3.6e-05 Score=73.34 Aligned_cols=238 Identities=9% Similarity=-0.004 Sum_probs=147.1
Q ss_pred eEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEecc
Q 038802 96 VTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLF 175 (532)
Q Consensus 96 v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 175 (532)
.+|.+..+++ +|+.+. ...|+..++.......... ....+..++|++.++.++++-...+.|..+++........+.
T Consensus 36 ~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 112 (349)
T 3v64_C 36 RSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 112 (349)
T ss_dssp SCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred CcccccccCc-eeEeec-ccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe
Confidence 3455555533 444443 4558888887655444443 344578999998456666666678899999998765433333
Q ss_pred CCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc--C-CeEEEEEccC
Q 038802 176 GHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG--G-NSVKIWDLIG 252 (532)
Q Consensus 176 ~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d-~~i~iwd~~~ 252 (532)
........+++.+..++++++-...+.|.+.++.... ..............++++|.+..|..+. . +.|..+++..
T Consensus 113 ~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG 191 (349)
T 3v64_C 113 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 191 (349)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC
Confidence 2333456788887456666776677899999987533 2222223345678999999665555444 4 6788888764
Q ss_pred CCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEE
Q 038802 253 GGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVI 331 (532)
Q Consensus 253 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~ 331 (532)
. .........-.....+++++++ +.++++-+..+.|..+|+........+. ......++++. .+...++
T Consensus 192 ~-~~~~~~~~~~~~PnGla~d~~~--------~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~t 261 (349)
T 3v64_C 192 S-GRRIIADTHLFWPNGLTIDYAG--------RRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWT 261 (349)
T ss_dssp C-SCEESCCSSCSCEEEEEEETTT--------TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEE
T ss_pred C-CcEEEEECCCCCcceEEEeCCC--------CEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEe
Confidence 3 2222222233456899999874 4555666667889999987543222222 23456778883 4555556
Q ss_pred EecCCcEEEEeecCcc
Q 038802 332 GTSNGTIFAGRRKKKE 347 (532)
Q Consensus 332 g~~dg~i~iw~~~~~~ 347 (532)
-...+.|..++..+++
T Consensus 262 d~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 262 DWHTKSINSANKFTGK 277 (349)
T ss_dssp ETTTTEEEEEETTTCC
T ss_pred cCCCCeEEEEEccCCC
Confidence 5667778777754443
No 266
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.74 E-value=7.2e-05 Score=70.19 Aligned_cols=234 Identities=11% Similarity=-0.011 Sum_probs=141.8
Q ss_pred eEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEE-EEcCCCCEEEEECCC----CceEEEecCCCCCEE
Q 038802 65 HLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLA-ASDLSGLIQVFDVKS----RTPLRRLKSHTRPVR 139 (532)
Q Consensus 65 ~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~----~~~~~~~~~h~~~i~ 139 (532)
+|+.+. ...|+..|+.+......+.. ...+..++|++++..|+ +-..++.|..+++.. ......+........
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 344444 46788999887665554443 34578899998655554 555678999999875 222222332223457
Q ss_pred EEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCC-CeEEEEEcccCCceeEEE
Q 038802 140 FVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYD-HTVKLWDVRVENSKSVME 218 (532)
Q Consensus 140 ~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~d-g~i~iwd~~~~~~~~~~~ 218 (532)
.+++.+.++.+.++-...+.|.++++........+...-.....+++.|.++.++++.... +.|..+++... ....+.
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~ 159 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLV 159 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEE
Confidence 8888863556666667788999999876543333333335678999998444444444333 68888887642 222222
Q ss_pred ecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCe-eeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCC
Q 038802 219 VNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGK-MVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDG 295 (532)
Q Consensus 219 ~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg 295 (532)
...-.....+++++++..|..+. .+.|..+|+..... .+............+++.. +.++++-...+
T Consensus 160 ~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~----------~~ly~~d~~~~ 229 (316)
T 1ijq_A 160 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE----------DKVFWTDIINE 229 (316)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET----------TEEEEEETTTT
T ss_pred ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC----------CEEEEEECCCC
Confidence 22345678999998776665555 57999999864322 2222111223345677642 35566666678
Q ss_pred eEEEEECCCceEEEee
Q 038802 296 YMKVFDYGKMKVTHSM 311 (532)
Q Consensus 296 ~i~iwd~~~~~~~~~~ 311 (532)
.|..+|..+++.+..+
T Consensus 230 ~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 230 AIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEEETTTCCCCEEE
T ss_pred eEEEEeCCCCcceEEE
Confidence 8888887666544444
No 267
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.74 E-value=8.9e-06 Score=71.81 Aligned_cols=183 Identities=10% Similarity=0.057 Sum_probs=122.6
Q ss_pred eEEEEeeccC--ceeEEEEEccCCCEEEEEcCC--CCEEEEECCCCceEEEecCCCCCE-EEEEeecCCCcEEEEEeCCC
Q 038802 84 EKHSAISSFK--DVVTCSSFRPDGSLLAASDLS--GLIQVFDVKSRTPLRRLKSHTRPV-RFVKYPFLDKLHLVSGGDDG 158 (532)
Q Consensus 84 ~~~~~~~~~~--~~v~~~~~~~~~~~l~~g~~d--g~i~iwd~~~~~~~~~~~~h~~~i-~~~~~~~~~~~~l~s~s~dg 158 (532)
+.+.++ .|. .....+.|++ +.+..+.+.+ +.|+.+|+.+++.+..+....... ..+++. ++......-.++
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~ 85 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCC
Confidence 445555 444 4567899986 5555566654 489999999999988876433321 334443 455555566789
Q ss_pred eEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEec-CC---CcEEEEEEecCC
Q 038802 159 IVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVN-HG---KPIEDVMFLPSG 234 (532)
Q Consensus 159 ~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~---~~v~~i~~~~~~ 234 (532)
.+.+||..+.+.+.++...... ..++ + ++..|+.+..++.|.++|..+.+....+... ++ ..++.+.+. +|
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~~G-wglt--~-dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G 160 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPGEG-WALT--S-DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG 160 (243)
T ss_dssp EEEEEETTTTEEEEEEECSSCC-CEEE--E-CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEEEEECCcCcEEEEEeCCCCc-eEEe--e-CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC
Confidence 9999999999999888643332 2444 4 5565666666889999999987766665543 22 234556665 67
Q ss_pred CEEEEEc-CCeEEEEEccCCCeeeEEccC-------------CCcceEEEEEeccC
Q 038802 235 GLIATAG-GNSVKIWDLIGGGKMVYSMES-------------HNKTVTSVCVGRVG 276 (532)
Q Consensus 235 ~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~ 276 (532)
.+.+..- ++.|.+.|..++ +.+..+.. .....+.++++|++
T Consensus 161 ~lyanvw~s~~I~vIDp~tG-~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~ 215 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASG-KVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH 215 (243)
T ss_dssp EEEEEETTTTEEEEECTTTC-BEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT
T ss_pred EEEEEECCCCeEEEEECCCC-CEEEEEECCcCccccccccCCcCCceEEEEEcCCC
Confidence 7666554 789999999887 66555431 12356889999984
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.73 E-value=1.5e-06 Score=90.78 Aligned_cols=267 Identities=8% Similarity=-0.035 Sum_probs=149.5
Q ss_pred EEEEcC-CCCeEEEEEeCC-----------eEEEEeCCCceEEE--Eeec-cCceeEEEEEccCCCEEEEEcC-CCCEEE
Q 038802 56 SIVFSP-TTSHLFAATHSA-----------SLTLFSSQTLEKHS--AISS-FKDVVTCSSFRPDGSLLAASDL-SGLIQV 119 (532)
Q Consensus 56 ~i~~sp-~~~~l~~~~~d~-----------~v~i~~~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~g~~-dg~i~i 119 (532)
++++.| +++.++.|+.++ .+.+||..+++-.. .+.. +.....++++..++++++.|+. ++.+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 566777 788788777542 68899988765322 2211 2233445677889999999984 458999
Q ss_pred EECCCCceEEEecCCCC-CEEEEEeecCCCcEEEEEe-CC-----CeEEEEECCCCeEEEec----cCCCCceEEEEEeC
Q 038802 120 FDVKSRTPLRRLKSHTR-PVRFVKYPFLDKLHLVSGG-DD-----GIVKFWDVAGESVVLDL----FGHKDYVRCGDCSP 188 (532)
Q Consensus 120 wd~~~~~~~~~~~~h~~-~i~~~~~~~~~~~~l~s~s-~d-----g~i~iwd~~~~~~~~~~----~~~~~~v~~i~~~~ 188 (532)
||..+.+-...-..+.. .-.+++..+ ++.+++.|+ .+ ..+.+||..+.+-...- ......-....+..
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred ecCcCCceeECCCCCccccccceEEec-CCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 99887654332221211 112344555 788888888 44 56999999887643320 00000000011122
Q ss_pred CCCCEEEEEeCCC---------eEEEEEcccCCceeEEEecC--------CCcEEEEEEec-CCCEEEEEc-CC------
Q 038802 189 VNGDMFVTGSYDH---------TVKLWDVRVENSKSVMEVNH--------GKPIEDVMFLP-SGGLIATAG-GN------ 243 (532)
Q Consensus 189 ~~~~~l~s~s~dg---------~i~iwd~~~~~~~~~~~~~~--------~~~v~~i~~~~-~~~~l~~~~-d~------ 243 (532)
++..++.|+.+| .+..||..+........... ...-.++.+.. ++++++.|+ ++
T Consensus 349 -~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~ 427 (656)
T 1k3i_A 349 -DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA 427 (656)
T ss_dssp -TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred -CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCc
Confidence 455555565544 46788887654322211110 11223444443 677777776 32
Q ss_pred -----eEEEEEccCCCeeeEEc--cCCCc-ceEEEEEeccCCCCCccccccEEEEEecC-----------CeEEEEECCC
Q 038802 244 -----SVKIWDLIGGGKMVYSM--ESHNK-TVTSVCVGRVGNESGEEAMQYRILSVALD-----------GYMKVFDYGK 304 (532)
Q Consensus 244 -----~i~iwd~~~~~~~~~~~--~~~~~-~i~~~~~~~~~~~~~~~~~~~~l~s~~~d-----------g~i~iwd~~~ 304 (532)
.+.+||..+. .-.... ..+.. .-.+++..++ +.+++.|+.+ ..+.+||..+
T Consensus 428 ~~~~~~v~~yd~~~~-~W~~~~~~~mp~~R~~~~~~~l~~---------g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 428 TTNAHIITLGEPGTS-PNTVFASNGLYFARTFHTSVVLPD---------GSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp CCCEEEEECCSTTSC-CEEEECTTCCSSCCBSCEEEECTT---------SCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred CCcceEEEcCCCCCC-CeeEEccCCCCCCcccCCeEECCC---------CCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 6778887665 222211 11222 2234455666 5778888764 4689999887
Q ss_pred ceEEEee--ecCCC-eeEEEEecCCCEEEEEec
Q 038802 305 MKVTHSM--RFPAP-LMSVAFSPDCMTRVIGTS 334 (532)
Q Consensus 305 ~~~~~~~--~~~~~-v~~~~~s~~~~~l~~g~~ 334 (532)
.+-...- ..... ..+..+.|+|+.++.|+.
T Consensus 498 ~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 498 DTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 6543322 12212 234456799999999985
No 269
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.72 E-value=1.4e-06 Score=77.64 Aligned_cols=179 Identities=15% Similarity=0.158 Sum_probs=122.5
Q ss_pred eeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEE-EEcCCCCEEEEECCCCceEEEec
Q 038802 54 INSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLA-ASDLSGLIQVFDVKSRTPLRRLK 132 (532)
Q Consensus 54 V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~~~~ 132 (532)
...+.|+. +.+..+.+.+|.|+++|+.+++....+ . ..........++++.|+ +.-.++.+.+||..+.+.+.++.
T Consensus 57 tqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 57 TQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred cceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 46788873 445555566789999999999988887 3 33333322233444444 44568899999999999999887
Q ss_pred CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccC--CC---CceEEEEEeCCCCCEEEEEeCCCeEEEEE
Q 038802 133 SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFG--HK---DYVRCGDCSPVNGDMFVTGSYDHTVKLWD 207 (532)
Q Consensus 133 ~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--~~---~~v~~i~~~~~~~~~l~s~s~dg~i~iwd 207 (532)
.... -..+++ ++..|+.+..++.|.++|..+.+.+..+.- +. ..++.+.|. ++.+++..-.+..|.+.|
T Consensus 134 ~~~e-GwGLt~---Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~~I~vID 207 (268)
T 3nok_A 134 YSGE-GWGLCY---WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSSDVLEID 207 (268)
T ss_dssp CSSC-CCCEEE---ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCSEEEEEC
T ss_pred CCCc-eeEEec---CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCCeEEEEe
Confidence 4322 244554 566677777789999999999988877643 22 234567776 566665555688999999
Q ss_pred cccCCceeEEEec------------CCCcEEEEEEecCCCEEEEEc
Q 038802 208 VRVENSKSVMEVN------------HGKPIEDVMFLPSGGLIATAG 241 (532)
Q Consensus 208 ~~~~~~~~~~~~~------------~~~~v~~i~~~~~~~~l~~~~ 241 (532)
.++++....+... ...-.+.|+++|+++.|+..+
T Consensus 208 p~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 208 PATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 9998776666543 123568899999765444444
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.71 E-value=3.5e-05 Score=74.57 Aligned_cols=237 Identities=9% Similarity=0.000 Sum_probs=148.2
Q ss_pred EEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccC
Q 038802 97 TCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFG 176 (532)
Q Consensus 97 ~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 176 (532)
+|.+..++ .+|+.+. ...|+.+++.......... ....+..++|++.++.++++-...+.|..+++........+..
T Consensus 80 ~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 156 (386)
T 3v65_B 80 SCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 156 (386)
T ss_dssp CEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS
T ss_pred eECCcccc-ceeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC
Confidence 44444443 3444443 4568888887665544444 3445789999984566666666788999999987654433333
Q ss_pred CCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc--C-CeEEEEEccCC
Q 038802 177 HKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG--G-NSVKIWDLIGG 253 (532)
Q Consensus 177 ~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d-~~i~iwd~~~~ 253 (532)
.......+++.+..+.++++-...+.|.+.++.... ..............++++|.+..|..+. . +.|..+++...
T Consensus 157 ~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~-~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 235 (386)
T 3v65_B 157 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 235 (386)
T ss_dssp SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC
Confidence 333456788887456666676677889999887533 2222223345678999998766555554 4 67888887654
Q ss_pred CeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEE
Q 038802 254 GKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIG 332 (532)
Q Consensus 254 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g 332 (532)
.........-.....++++|++ +.++++-+..+.|..+|+........+. ......++++ ..+..+++-
T Consensus 236 -~~~~~~~~~~~~PnGlavd~~~--------~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td 305 (386)
T 3v65_B 236 -GRRIIADTHLFWPNGLTIDYAG--------RRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTD 305 (386)
T ss_dssp -SCEEEECSSCSCEEEEEEEGGG--------TEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEE
T ss_pred -CcEEEEECCCCCeeeEEEeCCC--------CEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEee
Confidence 2222222233456899999874 4555666667889999987543322222 2345678888 344556666
Q ss_pred ecCCcEEEEeecCcc
Q 038802 333 TSNGTIFAGRRKKKE 347 (532)
Q Consensus 333 ~~dg~i~iw~~~~~~ 347 (532)
...+.|..++..+++
T Consensus 306 ~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 306 WHTKSINSANKFTGK 320 (386)
T ss_dssp TTTTEEEEEETTTCC
T ss_pred CCCCeEEEEECCCCc
Confidence 667788888754443
No 271
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.69 E-value=1.4e-05 Score=70.51 Aligned_cols=181 Identities=10% Similarity=0.037 Sum_probs=122.6
Q ss_pred CeeEEEEcCCCCeEEEEEeC--CeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEE-EEcCCCCEEEEECCCCceEE
Q 038802 53 SINSIVFSPTTSHLFAATHS--ASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLA-ASDLSGLIQVFDVKSRTPLR 129 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~~~~~d--~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~ 129 (532)
-...+.|++ +.+..+.+.. +.|+.+|+.+++....+..... .......++++.|+ ..-.++.+.+||..+.+.+.
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRA 99 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEE
Confidence 456889986 4434444443 4899999999999988765332 22222223344444 45568899999999999999
Q ss_pred EecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCC-----CceEEEEEeCCCCCEEEEEeCCCeEE
Q 038802 130 RLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHK-----DYVRCGDCSPVNGDMFVTGSYDHTVK 204 (532)
Q Consensus 130 ~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~i~~~~~~~~~l~s~s~dg~i~ 204 (532)
++.....+ ..+++ ++..|+.+..++.|.++|..+.+.+..+.-.. ..++.+.+. ++..++..-.+..|.
T Consensus 100 ti~~~~~G-wglt~---dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanvw~s~~I~ 173 (243)
T 3mbr_X 100 RFRYPGEG-WALTS---DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANVWLTSRIA 173 (243)
T ss_dssp EEECSSCC-CEEEE---CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTTTEEE
T ss_pred EEeCCCCc-eEEee---CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEEECCCCeEE
Confidence 88743332 45553 55666666678999999999998877764321 244566665 566666555678999
Q ss_pred EEEcccCCceeEEEec------------CCCcEEEEEEecCCCEEEEEc
Q 038802 205 LWDVRVENSKSVMEVN------------HGKPIEDVMFLPSGGLIATAG 241 (532)
Q Consensus 205 iwd~~~~~~~~~~~~~------------~~~~v~~i~~~~~~~~l~~~~ 241 (532)
+.|.++++....+... ...-.+.|+++|+++.|...+
T Consensus 174 vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 174 RIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 9999998776666543 123568899999777665555
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.67 E-value=0.00013 Score=68.45 Aligned_cols=229 Identities=11% Similarity=-0.005 Sum_probs=140.5
Q ss_pred EEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCC----CeEEEeccCCCCceE
Q 038802 107 LLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAG----ESVVLDLFGHKDYVR 182 (532)
Q Consensus 107 ~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~----~~~~~~~~~~~~~v~ 182 (532)
+|+.+. ...|+..|+.+......+. .......++|++.++..+++-..++.|..+++.+ ......+...-....
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 344443 3569999998776555544 3456789999984555666666678999999876 222222222223456
Q ss_pred EEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc--C-CeEEEEEccCCCeeeEE
Q 038802 183 CGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG--G-NSVKIWDLIGGGKMVYS 259 (532)
Q Consensus 183 ~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d-~~i~iwd~~~~~~~~~~ 259 (532)
.+++.+.+++++++-...+.|.++|+...... .+..........++++|.+..++.+. . +.|..+++..... ...
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~~~ 158 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSL 158 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEE-EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceE-EEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-EEE
Confidence 88888735556666677889999998753322 22222345678999998665544443 3 6888888754322 111
Q ss_pred ccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee---cCCCeeEEEEecCCCEEEEEecCC
Q 038802 260 MESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR---FPAPLMSVAFSPDCMTRVIGTSNG 336 (532)
Q Consensus 260 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~g~~dg 336 (532)
....-.....+++++++ +.++++-+..+.|..+|+.......... ......++++. .+..+++-...+
T Consensus 159 ~~~~~~~P~gla~d~~~--------~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~ 229 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLS--------GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINE 229 (316)
T ss_dssp ECSSCSCEEEEEEETTT--------TEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTT
T ss_pred EECCCCCceEEEEeccC--------CEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCC
Confidence 22233457899999874 4555565667899999987533222222 12346788885 355556666677
Q ss_pred cEEEEeecCccc
Q 038802 337 TIFAGRRKKKEN 348 (532)
Q Consensus 337 ~i~iw~~~~~~~ 348 (532)
.|..++..+++.
T Consensus 230 ~V~~~~~~~g~~ 241 (316)
T 1ijq_A 230 AIFSANRLTGSD 241 (316)
T ss_dssp EEEEEETTTCCC
T ss_pred eEEEEeCCCCcc
Confidence 888888755543
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.65 E-value=0.00017 Score=70.11 Aligned_cols=235 Identities=11% Similarity=-0.014 Sum_probs=146.7
Q ss_pred eEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEE-EEcCCCCEEEEECCCC----ceEEEecCCCCCEE
Q 038802 65 HLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLA-ASDLSGLIQVFDVKSR----TPLRRLKSHTRPVR 139 (532)
Q Consensus 65 ~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~----~~~~~~~~h~~~i~ 139 (532)
+|+. +....|+..++........+. ....+..++|++.+..|+ +-...+.|..+++... .....+........
T Consensus 85 ~ll~-~~~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFF-TNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEE-EETTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEE-eccceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 4444 456889999988765444443 345778999998655555 4455788999988652 23333333455678
Q ss_pred EEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeC-CCeEEEEEcccCCceeEEE
Q 038802 140 FVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSY-DHTVKLWDVRVENSKSVME 218 (532)
Q Consensus 140 ~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~ 218 (532)
.+++.+..+.+.++-...+.|.+.+++.......+...-.....+++.|..+.++++-.. .+.|...++..... ..+.
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~-~~~~ 241 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLV 241 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-EEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-EEEE
Confidence 889887456666666778899999988665444444344557899999944444444323 36788888865322 2222
Q ss_pred ecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCee-eEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCC
Q 038802 219 VNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKM-VYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDG 295 (532)
Q Consensus 219 ~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg 295 (532)
...-.....+++++++..|..+. .+.|..+|+...... +......-....++++.. +.++++-...+
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~----------~~lywtd~~~~ 311 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE----------DKVFWTDIINE 311 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET----------TEEEEEESSSC
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC----------CEEEEecCCCC
Confidence 23335678999998777666665 578999998654221 211111223345666632 34566666678
Q ss_pred eEEEEECCCceEEEeee
Q 038802 296 YMKVFDYGKMKVTHSMR 312 (532)
Q Consensus 296 ~i~iwd~~~~~~~~~~~ 312 (532)
.|..+|..+++.+..+.
T Consensus 312 ~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 312 AIFSANRLTGSDVNLLA 328 (400)
T ss_dssp SEEEEESSSCCCCEEEE
T ss_pred eEEEEEcCCCCceEEEe
Confidence 88888877776555554
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.65 E-value=8.6e-06 Score=86.31 Aligned_cols=191 Identities=8% Similarity=0.018 Sum_probs=112.9
Q ss_pred CeeEEEEc-CCCCeEEEEEeC-C----eEEEEeCCCc-eEEEEeeccCceeEEEEEccCCCEEEEEcCC-----CCEEEE
Q 038802 53 SINSIVFS-PTTSHLFAATHS-A----SLTLFSSQTL-EKHSAISSFKDVVTCSSFRPDGSLLAASDLS-----GLIQVF 120 (532)
Q Consensus 53 ~V~~i~~s-p~~~~l~~~~~d-~----~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d-----g~i~iw 120 (532)
.+...+|| |||+++|.+... | .|+++|+.++ +.+.. .-......++|+|||+.|+....+ ..|.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 67889999 999988876653 2 5999999988 63211 001223467899999888876654 258888
Q ss_pred ECCCCce--EEEec-CCCCCEEEEEeecCCCcEEEEEe---CCCeEEEEECCCC--eE--EEeccCCCCceEEEEEeCCC
Q 038802 121 DVKSRTP--LRRLK-SHTRPVRFVKYPFLDKLHLVSGG---DDGIVKFWDVAGE--SV--VLDLFGHKDYVRCGDCSPVN 190 (532)
Q Consensus 121 d~~~~~~--~~~~~-~h~~~i~~~~~~~~~~~~l~s~s---~dg~i~iwd~~~~--~~--~~~~~~~~~~v~~i~~~~~~ 190 (532)
++.++.. ...+. .+......+.|+| ++++|+..+ ....|.++|+.++ .. ............++.|+. +
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g 330 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T 330 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence 8877642 23332 2334567789999 888777655 2456888999875 23 222333445555666554 4
Q ss_pred CCEEEEEeCC----CeEEEEEcccC-Ccee-EEEecCCC--cEEEEEEecCCCEEEEEc-CC--eEEEEEc
Q 038802 191 GDMFVTGSYD----HTVKLWDVRVE-NSKS-VMEVNHGK--PIEDVMFLPSGGLIATAG-GN--SVKIWDL 250 (532)
Q Consensus 191 ~~~l~s~s~d----g~i~iwd~~~~-~~~~-~~~~~~~~--~v~~i~~~~~~~~l~~~~-d~--~i~iwd~ 250 (532)
+.+++.+..+ ..|..+|+.+. .... .+ .+.. .+..+.+. .+.++++.. ++ .+.++|+
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li--~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLV--DHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEE--CCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEE--CCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 4444444443 25666776542 2122 22 3333 44555554 233444444 66 4666665
No 275
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.63 E-value=0.00026 Score=66.68 Aligned_cols=279 Identities=10% Similarity=0.061 Sum_probs=153.7
Q ss_pred ccccccCCCccCccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEee----ccCceeEEEEEccCCCEEEEEc
Q 038802 37 KYWSSFKPHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAIS----SFKDVVTCSSFRPDGSLLAASD 112 (532)
Q Consensus 37 ~~w~~~~~~~~~~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~g~ 112 (532)
.-|..... .....+.+|.|.+++..++ ++..|.|.. ..+.++.-.... .....+.++.|.+ +..+++ +
T Consensus 25 ~~W~~~~~----~~~~~~~~v~~~~~~~~~~-~G~~g~i~~-s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~-g 96 (327)
T 2xbg_A 25 NPWEAIQL----PTTATILDMSFIDRHHGWL-VGVNATLME-TRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIV-G 96 (327)
T ss_dssp CCEEEEEC----SCSSCEEEEEESSSSCEEE-EETTTEEEE-ESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEE-E
T ss_pred CCceEeec----CCCCcEEEEEECCCCcEEE-EcCCCeEEE-eCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEE-E
Confidence 45765432 2234799999987776666 556676533 333343222221 1244788999976 444444 4
Q ss_pred CCCCEEEEECCCCceEEEec---CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEE-eccCCCCceEEEEEeC
Q 038802 113 LSGLIQVFDVKSRTPLRRLK---SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVL-DLFGHKDYVRCGDCSP 188 (532)
Q Consensus 113 ~dg~i~iwd~~~~~~~~~~~---~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~v~~i~~~~ 188 (532)
.+|.|.. ..+.++.-.... .+.+.+..+.+.+ ++..+++ +.+|.|.. ..+.++.-. ........+..+.+.+
T Consensus 97 ~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~-~~~~~~~-~~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~ 172 (327)
T 2xbg_A 97 EPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALG-NGSAEMI-TNVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSP 172 (327)
T ss_dssp ETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEE-TTEEEEE-ETTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECT
T ss_pred CCCeEEE-ECCCCCCceECccccCCCCCeEEEEEEC-CCCEEEE-eCCccEEE-EcCCCCCCEEeecCCCcceEEEEEcC
Confidence 4564433 333343333322 2345677888776 5555554 45665433 222232221 1234556788999998
Q ss_pred CCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEcc----CCC
Q 038802 189 VNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSME----SHN 264 (532)
Q Consensus 189 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~----~~~ 264 (532)
++.+++.+...+..+-.|-. +..-..........+..+.+.+++.+++.+.+|.+.+.+...+ ..-..+. .+.
T Consensus 173 -~~~~~~~g~~G~~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G-~tW~~~~~~~~~~~ 249 (327)
T 2xbg_A 173 -SGEYVAVSSRGSFYSTWEPG-QTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNS-ENWGELLSPLRRNS 249 (327)
T ss_dssp -TSCEEEEETTSSEEEEECTT-CSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEE-EEECCCBCTTSSCC
T ss_pred -CCcEEEEECCCcEEEEeCCC-CCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCC-CeeEeccCCcccCC
Confidence 77777766544333334421 1111122334566788999999998888777888777642212 2222121 122
Q ss_pred cceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee----cCCCeeEEEEecCCCEEEEEecCCcEEE
Q 038802 265 KTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR----FPAPLMSVAFSPDCMTRVIGTSNGTIFA 340 (532)
Q Consensus 265 ~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~g~~dg~i~i 340 (532)
..+.++.+.++ +. ++.++.+|.+ ++..+.++.-..+. .+..+.++.|.+++. +++++.+|.|.-
T Consensus 250 ~~~~~v~~~~~---------~~-~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~ 317 (327)
T 2xbg_A 250 VGFLDLAYRTP---------NE-VWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLR 317 (327)
T ss_dssp SCEEEEEESSS---------SC-EEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEE
T ss_pred cceEEEEecCC---------CE-EEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEE
Confidence 35788888765 34 4444557766 44444443322222 245788999986554 666778887665
Q ss_pred Ee
Q 038802 341 GR 342 (532)
Q Consensus 341 w~ 342 (532)
++
T Consensus 318 ~~ 319 (327)
T 2xbg_A 318 YV 319 (327)
T ss_dssp EC
T ss_pred Ec
Confidence 54
No 276
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.62 E-value=9.4e-05 Score=66.22 Aligned_cols=202 Identities=5% Similarity=0.021 Sum_probs=133.4
Q ss_pred EecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEecc-CCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEc
Q 038802 130 RLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLF-GHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDV 208 (532)
Q Consensus 130 ~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~ 208 (532)
.+.+-...+..++|+|.++.++++...++.|...|.. ++.+..+. +-....-.+++.+ ++.++++.-.++.+.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEc
Confidence 4556667899999999445566667788999999998 77777663 2224567888887 7776666656788999987
Q ss_pred ccCCce---eEEEe-----cCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccC--CCeeeEEc-------cCCCcceEEE
Q 038802 209 RVENSK---SVMEV-----NHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIG--GGKMVYSM-------ESHNKTVTSV 270 (532)
Q Consensus 209 ~~~~~~---~~~~~-----~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~--~~~~~~~~-------~~~~~~i~~~ 270 (532)
...... ..... ........++|+|.+..|.++. .+...+|.+.. ....+..+ ..+.....++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 654421 11211 2345579999999987666666 33444444431 10111111 1233457889
Q ss_pred EEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecC----------CCeeEEEEecCCCEEEEEecCCcEEE
Q 038802 271 CVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFP----------APLMSVAFSPDCMTRVIGTSNGTIFA 340 (532)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----------~~v~~~~~s~~~~~l~~g~~dg~i~i 340 (532)
++.|.. +.+++....+..+.++|.. ++++..+... ...-.|+|.++|+ |+..+..+.++.
T Consensus 179 ~~dp~t--------g~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~ 248 (255)
T 3qqz_A 179 EFNQQK--------NTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYR 248 (255)
T ss_dssp EEETTT--------TEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEE
T ss_pred EEcCCC--------CeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEE
Confidence 999875 6778888888999999966 5566666533 1557899999998 444566666665
Q ss_pred Eee
Q 038802 341 GRR 343 (532)
Q Consensus 341 w~~ 343 (532)
++.
T Consensus 249 f~~ 251 (255)
T 3qqz_A 249 FTP 251 (255)
T ss_dssp EEC
T ss_pred EEe
Confidence 543
No 277
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.60 E-value=4e-05 Score=75.28 Aligned_cols=244 Identities=11% Similarity=0.072 Sum_probs=136.9
Q ss_pred eeEEEEEcc-CCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeC-CC----eEEEEECCCC
Q 038802 95 VVTCSSFRP-DGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGD-DG----IVKFWDVAGE 168 (532)
Q Consensus 95 ~v~~~~~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~-dg----~i~iwd~~~~ 168 (532)
....++++| ++..|+++...+.|+.+|...+...... ........++|++ +++.|+++.. ++ .+..++....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILTRESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEGGGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeCCCc
Confidence 356889998 4555666654588999998876544333 3556688999998 7775555543 22 3444443221
Q ss_pred eE-EEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc--CCeE
Q 038802 169 SV-VLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG--GNSV 245 (532)
Q Consensus 169 ~~-~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~i 245 (532)
.. ...+.. ......++++|.++.++++-..++.|..+|....................++|+|+|++|..+. .+.|
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 11 111211 2234567888855666666667789999998764332333333334567899999999555544 6799
Q ss_pred EEEEccCC-Cee--eEEccCC---C------------cceE-EEEEeccCCCCCccccccEEEEEecCCeEEEEECCCce
Q 038802 246 KIWDLIGG-GKM--VYSMESH---N------------KTVT-SVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMK 306 (532)
Q Consensus 246 ~iwd~~~~-~~~--~~~~~~~---~------------~~i~-~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 306 (532)
..++.... +.. ...+.+. . ..-. .++..++. ....+..+.++++-...+.|+.++ .++.
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~-y~~~D~~g~lyvaD~~n~~I~~i~-~~G~ 372 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPA-YKGSSDEYDFYFCDRENHCIRILT-PQGR 372 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGG-GTTSSCCEEEEEEEGGGTEEEEEC-TTSE
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEcccc-ccccCCCCeEEEEECCCcEEEEEC-CCCc
Confidence 99887632 111 1111110 0 0112 34433210 000000134555555667888888 4555
Q ss_pred EEEeeec---------C---------CCeeEEEEecC-CCEEEEEecCCcEEEEee
Q 038802 307 VTHSMRF---------P---------APLMSVAFSPD-CMTRVIGTSNGTIFAGRR 343 (532)
Q Consensus 307 ~~~~~~~---------~---------~~v~~~~~s~~-~~~l~~g~~dg~i~iw~~ 343 (532)
....... + .....++++|+ |.++++-..+..|+.++.
T Consensus 373 v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 373 VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 4443322 1 14788999995 555555555667777765
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.57 E-value=0.00013 Score=68.38 Aligned_cols=233 Identities=7% Similarity=-0.052 Sum_probs=141.6
Q ss_pred eEEEEEeCCeEEEEeCCCce--EEEEeeccCceeEEEEEccCC-CEEEEEcCCCCEEEEECCCCce-EEEecCCCCCEEE
Q 038802 65 HLFAATHSASLTLFSSQTLE--KHSAISSFKDVVTCSSFRPDG-SLLAASDLSGLIQVFDVKSRTP-LRRLKSHTRPVRF 140 (532)
Q Consensus 65 ~l~~~~~d~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~-~~~~~~h~~~i~~ 140 (532)
+|+.+. ...|+.+++.... ....+.. ...+..++|.+.+ .+.++-...+.|..++...+.. ...+.........
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence 444443 4788999987653 2222222 2456789999854 4455556678899999876532 1222222234567
Q ss_pred EEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEe--CCCeEEEEEcccCCceeEEE
Q 038802 141 VKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGS--YDHTVKLWDVRVENSKSVME 218 (532)
Q Consensus 141 ~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~ 218 (532)
+++.+.++.++++-...+.|.++++..................+++.| .+..|+.+. ..+.|...++.... ...+.
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp-~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~ 161 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDP-SSGFMYWTDWGEVPKIERAGMDGSS-RFIII 161 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEG-GGTEEEEEECSSSCEEEEEETTSCS-CEEEE
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCC-eEEEE
Confidence 888864666666767788999999875433333333445668999998 444444443 25778888876422 22222
Q ss_pred ecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCe
Q 038802 219 VNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGY 296 (532)
Q Consensus 219 ~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~ 296 (532)
...-.....++++|++..|..+. .+.|..+|+...... ............+++.. +..+++-...+.
T Consensus 162 ~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~-~~~~~~~~~P~glav~~----------~~lywtd~~~~~ 230 (318)
T 3sov_A 162 NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ-AVVKGSLPHPFALTLFE----------DILYWTDWSTHS 230 (318)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECSCCSCEEEEEEET----------TEEEEEETTTTE
T ss_pred ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceE-EEecCCCCCceEEEEeC----------CEEEEEecCCCe
Confidence 12234568999999766665554 579999998653222 12222334456677643 345666666788
Q ss_pred EEEEECCCceEEEeee
Q 038802 297 MKVFDYGKMKVTHSMR 312 (532)
Q Consensus 297 i~iwd~~~~~~~~~~~ 312 (532)
|..++..+++....+.
T Consensus 231 V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 231 ILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEEETTTCCSCEEEE
T ss_pred EEEEECCCCCceEEEe
Confidence 9999987766554443
No 279
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.51 E-value=6e-05 Score=73.98 Aligned_cols=236 Identities=11% Similarity=0.016 Sum_probs=136.1
Q ss_pred eeEEEEEccC--CCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCC---C-eEEEEECCCC
Q 038802 95 VVTCSSFRPD--GSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDD---G-IVKFWDVAGE 168 (532)
Q Consensus 95 ~v~~~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~d---g-~i~iwd~~~~ 168 (532)
....++|+|+ +..|+.+...+.|+.+|..++..... .........++|++ ++.++++.... . .+...+...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECC-CCCEEEEcCCCCcccceEEEEECCCC
Confidence 3568899984 44555554448899999987765544 33455689999999 77744443311 1 2333332221
Q ss_pred eE-EEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCc-eeEEEecCCCcEEEEEEecCCCEEEEEc--CCe
Q 038802 169 SV-VLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENS-KSVMEVNHGKPIEDVMFLPSGGLIATAG--GNS 244 (532)
Q Consensus 169 ~~-~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~ 244 (532)
.. ...+. .-.....++++|.++.++++-..++.|+.+|..++.. ...........-..++|+|+++.|..+. .+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 10 01111 1223346788885566666666778899999876544 2222222222334699999999555544 579
Q ss_pred EEEEEccCCC-ee--eEEccCC---------------CcceEEEEE---------eccCCCCCccccccEEEEEecCCeE
Q 038802 245 VKIWDLIGGG-KM--VYSMESH---------------NKTVTSVCV---------GRVGNESGEEAMQYRILSVALDGYM 297 (532)
Q Consensus 245 i~iwd~~~~~-~~--~~~~~~~---------------~~~i~~~~~---------~~~~~~~~~~~~~~~l~s~~~dg~i 297 (532)
|..+++.... .. ...+.+. -.....+++ .++ +.++++-...+.|
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~---------g~lyvaD~~n~~I 367 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDE---------YDFYFCDRDSHTV 367 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCC---------EEEEEEETTTTEE
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCC---------CcEEEEECCCCEE
Confidence 9998865211 11 0111110 112456777 333 5566666667889
Q ss_pred EEEECCCceEEEeeecC------------------CCeeEEEEe-cCCCEEEEEecCCcEEEEee
Q 038802 298 KVFDYGKMKVTHSMRFP------------------APLMSVAFS-PDCMTRVIGTSNGTIFAGRR 343 (532)
Q Consensus 298 ~iwd~~~~~~~~~~~~~------------------~~v~~~~~s-~~~~~l~~g~~dg~i~iw~~ 343 (532)
+.++. ++......... .....++++ ++|.++++=..++.|+.++.
T Consensus 368 ~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 368 RVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 99985 55544333210 136789999 56666665556677777765
No 280
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.49 E-value=6.3e-06 Score=87.36 Aligned_cols=237 Identities=15% Similarity=0.079 Sum_probs=133.0
Q ss_pred eeEEEEEc-cCCCEEEEEcC-CC----CEEEEECCCC-ceEEE-ecCCCCCEEEEEeecCCCcEEEEEeCC-----CeEE
Q 038802 95 VVTCSSFR-PDGSLLAASDL-SG----LIQVFDVKSR-TPLRR-LKSHTRPVRFVKYPFLDKLHLVSGGDD-----GIVK 161 (532)
Q Consensus 95 ~v~~~~~~-~~~~~l~~g~~-dg----~i~iwd~~~~-~~~~~-~~~h~~~i~~~~~~~~~~~~l~s~s~d-----g~i~ 161 (532)
.+...+|| |||++||.+.. +| +|+++|+.++ +.+.. +. .....+.|+| +++.|+....| ..|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~Wsp-Dg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGP-DHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECS-STTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEec-CCCEEEEEEECCCCCCCEEE
Confidence 67889999 99998885532 33 4999999988 53211 11 1123578999 77666666654 3688
Q ss_pred EEECCCCe--EEEecc-CCCCceEEEEEeCCCCCEEEEEeC---CCeEEEEEcccCCcee---EEEecCCCcEEEEEEec
Q 038802 162 FWDVAGES--VVLDLF-GHKDYVRCGDCSPVNGDMFVTGSY---DHTVKLWDVRVENSKS---VMEVNHGKPIEDVMFLP 232 (532)
Q Consensus 162 iwd~~~~~--~~~~~~-~~~~~v~~i~~~~~~~~~l~s~s~---dg~i~iwd~~~~~~~~---~~~~~~~~~v~~i~~~~ 232 (532)
++++.++. ....+. ........+.|+| ++++|+..+. ...|.++|+.++.... .+.........++.|+.
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG 329 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET
T ss_pred EEECCCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee
Confidence 89987753 122222 2334566789999 8888776653 3468888987653222 22222344556666655
Q ss_pred CCCEEEEEc-C--C--eEEEEEccCCCeeeEE-ccCCCc--ceEEEEEeccCCCCCccccccEEEEEecCCe--EEEEEC
Q 038802 233 SGGLIATAG-G--N--SVKIWDLIGGGKMVYS-MESHNK--TVTSVCVGRVGNESGEEAMQYRILSVALDGY--MKVFDY 302 (532)
Q Consensus 233 ~~~~l~~~~-d--~--~i~iwd~~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~--i~iwd~ 302 (532)
++.+++.+. + + .|..+|+.+.... .. +..+.. .+..+.+. + +.++++...+|. |.++|+
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~~~~~-~~~li~~~~~~~l~~~~~~--~--------~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQPSDW-SHVLVDHSEDVFMESIAVR--S--------NYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTSTTCC-CCEEECCCSSEEEEEEEEC--S--------SEEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCCcccc-eeeEECCCCCcEEEEEEEE--C--------CEEEEEEEeCCEEEEEEEec
Confidence 555555544 3 2 5777776542121 11 222332 34455443 2 456777777886 555565
Q ss_pred -------CCceEEEeeecCCCeeEEEE------ecCCC-EEEEEecC---CcEEEEeecCcc
Q 038802 303 -------GKMKVTHSMRFPAPLMSVAF------SPDCM-TRVIGTSN---GTIFAGRRKKKE 347 (532)
Q Consensus 303 -------~~~~~~~~~~~~~~v~~~~~------s~~~~-~l~~g~~d---g~i~iw~~~~~~ 347 (532)
.+++....+..+.....+.+ ++++. ++++.++. +.++.+++.+++
T Consensus 399 ~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 399 DSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp CTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred ccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 34431233333333333344 34554 44444433 457777766543
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.48 E-value=0.00045 Score=67.06 Aligned_cols=230 Identities=11% Similarity=0.016 Sum_probs=142.8
Q ss_pred EEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC----eEEEeccCCCCceE
Q 038802 107 LLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE----SVVLDLFGHKDYVR 182 (532)
Q Consensus 107 ~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~----~~~~~~~~~~~~v~ 182 (532)
+|+.+. ...|+..++.......... ....+..++|++.++.++++-...+.|..+++... .....+........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 444443 4678888888665444443 45678899999845555556566788999998752 22222333344567
Q ss_pred EEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc---CCeEEEEEccCCCeeeEE
Q 038802 183 CGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG---GNSVKIWDLIGGGKMVYS 259 (532)
Q Consensus 183 ~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~---d~~i~iwd~~~~~~~~~~ 259 (532)
.+++.+..++++++-...+.|.+.++.......... ........++++|.+..|+.+. .+.|...++... .....
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~-~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-~~~~~ 240 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSL 240 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE-CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-SCEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe-CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-ccEEE
Confidence 889987556666776778899999987543322222 3445578999999665555444 267888887654 22222
Q ss_pred ccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeec---CCCeeEEEEecCCCEEEEEecCC
Q 038802 260 MESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRF---PAPLMSVAFSPDCMTRVIGTSNG 336 (532)
Q Consensus 260 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~g~~dg 336 (532)
....-.....+++++++ +.++++-+..+.|..+|+........... -....++++. .+..+++-...+
T Consensus 241 ~~~~l~~P~glavd~~~--------~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~ 311 (400)
T 3p5b_L 241 VTENIQWPNGITLDLLS--------GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINE 311 (400)
T ss_dssp ECSSCSCEEEEEEETTT--------TEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSC
T ss_pred EECCCCceEEEEEEeCC--------CEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCC
Confidence 22333567899999874 44555555678899999876433322221 2345677773 334555656677
Q ss_pred cEEEEeecCcccc
Q 038802 337 TIFAGRRKKKENV 349 (532)
Q Consensus 337 ~i~iw~~~~~~~~ 349 (532)
.|..++..+++..
T Consensus 312 ~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 312 AIFSANRLTGSDV 324 (400)
T ss_dssp SEEEEESSSCCCC
T ss_pred eEEEEEcCCCCce
Confidence 8888886665443
No 282
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.47 E-value=0.00015 Score=71.23 Aligned_cols=154 Identities=10% Similarity=0.051 Sum_probs=99.6
Q ss_pred CeeEEEEcC-CCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcC-CC----CEEEEECCCCc
Q 038802 53 SINSIVFSP-TTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDL-SG----LIQVFDVKSRT 126 (532)
Q Consensus 53 ~V~~i~~sp-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-dg----~i~iwd~~~~~ 126 (532)
....++++| ++..|+++...+.|+.+|..++....... .......++|+++|++|+++.. ++ .+..++.. +.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 557899998 45667777666889999988766544433 4456789999999996665543 22 23334432 22
Q ss_pred eE--EEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEecc-CCCCceEEEEEeCCCCC-EEEEEeCCCe
Q 038802 127 PL--RRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLF-GHKDYVRCGDCSPVNGD-MFVTGSYDHT 202 (532)
Q Consensus 127 ~~--~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~v~~i~~~~~~~~-~l~s~s~dg~ 202 (532)
.. ..+.. ......++++|.++.++++-..++.|..++..++....... +.......++++| +++ ++++-...+.
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~p-dG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHP-SGNYAYIVVVNQHY 293 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECT-TSSEEEEEETTTTE
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcC-CCCEEEEEECCCCE
Confidence 11 22221 22345677888556666666677899999998776422221 1223467899999 888 5555566788
Q ss_pred EEEEEccc
Q 038802 203 VKLWDVRV 210 (532)
Q Consensus 203 i~iwd~~~ 210 (532)
|..++...
T Consensus 294 I~~~~~d~ 301 (430)
T 3tc9_A 294 ILRSDYDW 301 (430)
T ss_dssp EEEEEEET
T ss_pred EEEEeCCc
Confidence 99988764
No 283
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.44 E-value=0.0012 Score=62.53 Aligned_cols=309 Identities=12% Similarity=0.113 Sum_probs=186.3
Q ss_pred CeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEE
Q 038802 73 ASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLV 152 (532)
Q Consensus 73 ~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~ 152 (532)
..|.|.|+.++.....-.- ..-+.-.+|..+.||.-. ..++.|+|+++.+.+..+.-.. .|.-=.|- +.+.|+
T Consensus 48 ~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWi--s~~~l~ 120 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWI--SLNTVA 120 (494)
T ss_dssp CEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEE--ETTEEE
T ss_pred CeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEec--CCCeEE
Confidence 4788999887654432221 112345688888888765 6789999999999988887544 45555565 344455
Q ss_pred EEeCCCeEEEEECCCC-eEEEeccCC----CCceEEEEEeCCCCCEEEEEe-------CCCeEEEEEcccCCceeEEEec
Q 038802 153 SGGDDGIVKFWDVAGE-SVVLDLFGH----KDYVRCGDCSPVNGDMFVTGS-------YDHTVKLWDVRVENSKSVMEVN 220 (532)
Q Consensus 153 s~s~dg~i~iwd~~~~-~~~~~~~~~----~~~v~~i~~~~~~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~~ 220 (532)
-.+ +..|+-|++... .+...+.-| ...|..-..++ +.++++..+ -.|.+.+|..+. ......-+
T Consensus 121 lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieG 196 (494)
T 1bpo_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEG 196 (494)
T ss_dssp EEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECT-TSSEEEEEEEEEETTEEEEEEEEEESTT--CCEEEECC
T ss_pred EEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECC-CCCeEEEEeecccCCcccceEEEeeccc--cccchhee
Confidence 544 468999999743 455555433 34555666666 666665433 246788998875 33333335
Q ss_pred CCCcEEEEEEecCC---CEEEEEc----CCeEEEEEccCC--C------eeeEEcc---CCCcceEEEEEeccCCCCCcc
Q 038802 221 HGKPIEDVMFLPSG---GLIATAG----GNSVKIWDLIGG--G------KMVYSME---SHNKTVTSVCVGRVGNESGEE 282 (532)
Q Consensus 221 ~~~~v~~i~~~~~~---~~l~~~~----d~~i~iwd~~~~--~------~~~~~~~---~~~~~i~~~~~~~~~~~~~~~ 282 (532)
|......+.+..+. .+++.+. ++.+.|.++... + +.+..+. ....--.++..++.
T Consensus 197 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~k------- 269 (494)
T 1bpo_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK------- 269 (494)
T ss_dssp SEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETT-------
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEeccc-------
Confidence 55444444332211 2333333 368999998543 1 1111111 11223456666666
Q ss_pred ccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCccccccccccccccCc
Q 038802 283 AMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENVESGIENFWSLGR 361 (532)
Q Consensus 283 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~ 361 (532)
...++..+.-|.+++||+.++.++..-+ ...+|..-+-.....-+++....|.|.--.++.......-....
T Consensus 270 --ygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ivpyi~~~l----- 342 (494)
T 1bpo_A 270 --HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVL----- 342 (494)
T ss_dssp --TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHHHHHHHTT-----
T ss_pred --CCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccchhhhhhcc-----
Confidence 5678889999999999999999998877 44567666666666666777789988888887765442111100
Q ss_pred ccccccccCCccceeeecCCCCCCCCCcEEEeCcccccchhHHHhhcccchHHHHHHhhCC
Q 038802 362 VETQKPMLRPTYFRYFQRGQSDKPSEGDYLVVRPKKLKLGEHDKLLKKFRHKEALVSVLNG 422 (532)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~al~~al~~ 422 (532)
.....-..+..+...+..+ ..-.+++++++.+++|.+|-..|...
T Consensus 343 --------~n~~lA~~lA~R~~LpGAd--------~L~~~~F~~l~~~g~y~~AA~~aA~s 387 (494)
T 1bpo_A 343 --------QNPDLALRMAVRNNLAGAE--------ELFARKFNALFAQGNYSEAAKVAANA 387 (494)
T ss_dssp --------CCHHHHHHHHHHTTCSSCH--------HHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred --------CCHHHHHHHHHhcCCccHH--------HHHHHHHHHHHHcCCHHHHHHHHHhC
Confidence 0000000011111122122 22467799999999999999999854
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.39 E-value=0.00025 Score=69.56 Aligned_cols=196 Identities=12% Similarity=0.062 Sum_probs=116.0
Q ss_pred cCeeEEEEcCC--CCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCC---C-CEEEEECCCC
Q 038802 52 SSINSIVFSPT--TSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLS---G-LIQVFDVKSR 125 (532)
Q Consensus 52 ~~V~~i~~sp~--~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d---g-~i~iwd~~~~ 125 (532)
.....++|+|+ +..|+++...+.|+.+|..++....... ......+++|+++|+++++.... . .+..++...+
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 35678999995 4456666555899999998776655443 34568899999999944444321 1 1333332221
Q ss_pred ce-EEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec-c-CCCCceEEEEEeCCCCC-EEEEEeCCC
Q 038802 126 TP-LRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL-F-GHKDYVRCGDCSPVNGD-MFVTGSYDH 201 (532)
Q Consensus 126 ~~-~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~-~~~~~v~~i~~~~~~~~-~l~s~s~dg 201 (532)
.. ...+. .......++++|.++.++++-..++.|+.+|..++.....+ . +....-..++++| +++ ++++-...+
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dp-dG~~LYvad~~~~ 295 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHP-TGDWAYIIYNGKH 295 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECT-TSSEEEEEETTTT
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeC-CCCEEEEEeCCCC
Confidence 11 01111 12334567788745555555556788999999877652222 1 1122234699999 887 555555678
Q ss_pred eEEEEEccc--CCce--eEEEe--c------------CCCcEEEEEE---------ecCCCEEEEEc-CCeEEEEEc
Q 038802 202 TVKLWDVRV--ENSK--SVMEV--N------------HGKPIEDVMF---------LPSGGLIATAG-GNSVKIWDL 250 (532)
Q Consensus 202 ~i~iwd~~~--~~~~--~~~~~--~------------~~~~v~~i~~---------~~~~~~l~~~~-d~~i~iwd~ 250 (532)
.|..++... +... ..+.- . .-.....+++ .++|.++++-. .+.|+.++.
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 899988653 2111 11110 0 0123567888 66777766665 678999884
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.39 E-value=0.00052 Score=72.29 Aligned_cols=233 Identities=12% Similarity=-0.015 Sum_probs=140.3
Q ss_pred eEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCE-EEEEcCCCCEEEEECCCC----ceEEEecCCCCCEE
Q 038802 65 HLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSL-LAASDLSGLIQVFDVKSR----TPLRRLKSHTRPVR 139 (532)
Q Consensus 65 ~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~g~~dg~i~iwd~~~~----~~~~~~~~h~~~i~ 139 (532)
+|+. +....|+..++........+.. ...+..++|.+.+.. +++-...+.|+.+++... .....+........
T Consensus 397 ~Ll~-an~~~Ir~i~l~~~~~~~l~~~-~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFF-TNRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEE-ECBSSEEEECTTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred cccc-ccccceeEeeccCCcceeeecC-CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 3443 3456788888876554443333 456788999985444 445556678998988652 22333433445567
Q ss_pred EEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCC-CeEEEEEcccCCceeEEE
Q 038802 140 FVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYD-HTVKLWDVRVENSKSVME 218 (532)
Q Consensus 140 ~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~d-g~i~iwd~~~~~~~~~~~ 218 (532)
.|++.+..++++++-...+.|.+.++........+...-.....|++.|..+.++++-... +.|...++.... ...+.
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~-~~~lv 553 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLV 553 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEE
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc-eEEEE
Confidence 7888874556677777789999999986554333333445678999999445455544333 678888886532 33332
Q ss_pred ecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCeeeEEccC--CCcceEEEEEeccCCCCCccccccEEEEEecC
Q 038802 219 VNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKMVYSMES--HNKTVTSVCVGRVGNESGEEAMQYRILSVALD 294 (532)
Q Consensus 219 ~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~d 294 (532)
...-.....|++++.+..|+.+. .+.|..+++..... ...+.. .-....+|++.. +.++++-...
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~-~~v~~~~~~l~~P~glav~~----------~~lYwtD~~~ 622 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFE----------DKVFWTDIIN 622 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEET----------TEEEEEETTT
T ss_pred eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce-EEEecCCCccCCCCEEEEeC----------CEEEEEECCC
Confidence 23345678999998766666655 56899999865422 222221 122334555532 3455555566
Q ss_pred CeEEEEECCCceEEEee
Q 038802 295 GYMKVFDYGKMKVTHSM 311 (532)
Q Consensus 295 g~i~iwd~~~~~~~~~~ 311 (532)
+.|...|..+++.+..+
T Consensus 623 ~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 623 EAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TEEEEEETTTCCCCEEE
T ss_pred CEEEEEeCCCCcceEEe
Confidence 78888887666544443
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.33 E-value=0.00098 Score=65.63 Aligned_cols=249 Identities=15% Similarity=0.080 Sum_probs=141.8
Q ss_pred eEEEEEcc-CCCEEEEE-cCCCCEEEEECCCCceEEEecCC---CCCEEEEEe-------ecCCCcEEEEEeCCC-----
Q 038802 96 VTCSSFRP-DGSLLAAS-DLSGLIQVFDVKSRTPLRRLKSH---TRPVRFVKY-------PFLDKLHLVSGGDDG----- 158 (532)
Q Consensus 96 v~~~~~~~-~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~h---~~~i~~~~~-------~~~~~~~l~s~s~dg----- 158 (532)
...++|.| ++..|+++ ...+.|++.|..++......... ......++| ++ ++..|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeCCCCCccc
Confidence 46889998 34445544 43467999998877655544322 234789999 98 777666665543
Q ss_pred --eEEEEECCC-CeEE-----EeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcc-------cCCc----------
Q 038802 159 --IVKFWDVAG-ESVV-----LDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVR-------VENS---------- 213 (532)
Q Consensus 159 --~i~iwd~~~-~~~~-----~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~-------~~~~---------- 213 (532)
.|.+++... +... ..+... .....++++|.++.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 366665433 1110 111111 1234678888556667777788899999997 4432
Q ss_pred --eeEEEecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCC-ee--eEEccCC---C------------cceE-EE
Q 038802 214 --KSVMEVNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGG-KM--VYSMESH---N------------KTVT-SV 270 (532)
Q Consensus 214 --~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~-~~--~~~~~~~---~------------~~i~-~~ 270 (532)
..............++|+|+|+.|..+. .+.|+.++..... .. ...+.+. . .... .+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 0223333344567899999999655544 6789987764321 11 0111111 0 1122 33
Q ss_pred EEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeec---------------C---------CCeeEEEEecC-
Q 038802 271 CVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRF---------------P---------APLMSVAFSPD- 325 (532)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------------~---------~~v~~~~~s~~- 325 (532)
+.... ... ....+.++++-.....|+.++ .++........ + .....++++++
T Consensus 379 ~vd~~-~~~-~~~~g~lyVaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~ 455 (496)
T 3kya_A 379 FVKNP-DYT-GEEEYDFYFVDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVK 455 (496)
T ss_dssp EEECT-TCC-SSCCEEEEEEEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTT
T ss_pred EEccc-ccc-ccCCCeEEEEECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCC
Confidence 33310 000 000145666666778899998 45544332211 0 13578999997
Q ss_pred CCEEEEEecCCcEEEEeecCcccc
Q 038802 326 CMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 326 ~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
|.+.++=..+..|+.+++......
T Consensus 456 g~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 456 EMFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp TEEEEEETTTTEEEEEEECCCC--
T ss_pred CEEEEEeCCCCEEEEEECCCCccc
Confidence 666666666778999888766543
No 287
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.32 E-value=0.00043 Score=64.77 Aligned_cols=223 Identities=10% Similarity=0.020 Sum_probs=136.5
Q ss_pred CCCEEEEECCCCc--eEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEE-EeccCCCCceEEEEEeCCC
Q 038802 114 SGLIQVFDVKSRT--PLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVV-LDLFGHKDYVRCGDCSPVN 190 (532)
Q Consensus 114 dg~i~iwd~~~~~--~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~~v~~i~~~~~~ 190 (532)
...|+.+++.... ....+. .......++|++.++.++.+-...+.|..+++..+... ..+...-.....+++.+..
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 4678888887653 111222 22346688998845666666667789999998765321 1111122345578888745
Q ss_pred CCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc---CCeEEEEEccCCCeeeEEccCCCcce
Q 038802 191 GDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG---GNSVKIWDLIGGGKMVYSMESHNKTV 267 (532)
Q Consensus 191 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~i 267 (532)
++++++-...+.|.++++.... ..............++++|.+..|+.+. .+.|..+++..... .......-..-
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~l~~P 168 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINSEIYWP 168 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCE
T ss_pred CeEEEEECCCCEEEEEECCCCc-EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEEECCCCCc
Confidence 6666776677899999987532 2222223445678999998655554444 36788888764322 12222223456
Q ss_pred EEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCc
Q 038802 268 TSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~ 346 (532)
..+++++++ +.++++-+..+.|..+|+.......... ......++++.. +..+.+-...+.|..++..++
T Consensus 169 nglavd~~~--------~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 169 NGLTLDYEE--------QKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp EEEEEETTT--------TEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred cEEEEeccC--------CEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCC
Confidence 899999874 4555666667899999987533222222 234567777764 345555566778888887665
Q ss_pred cc
Q 038802 347 EN 348 (532)
Q Consensus 347 ~~ 348 (532)
+.
T Consensus 240 ~~ 241 (318)
T 3sov_A 240 EG 241 (318)
T ss_dssp CS
T ss_pred Cc
Confidence 43
No 288
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.32 E-value=3.3e-05 Score=80.59 Aligned_cols=239 Identities=13% Similarity=0.078 Sum_probs=133.5
Q ss_pred EEEEcc-CCCEEEEEcCCC-----------CEEEEECCCCce--EEEec-CCCCCEEEEEeecCCCcEEEEEeC-CCeEE
Q 038802 98 CSSFRP-DGSLLAASDLSG-----------LIQVFDVKSRTP--LRRLK-SHTRPVRFVKYPFLDKLHLVSGGD-DGIVK 161 (532)
Q Consensus 98 ~~~~~~-~~~~l~~g~~dg-----------~i~iwd~~~~~~--~~~~~-~h~~~i~~~~~~~~~~~~l~s~s~-dg~i~ 161 (532)
++++.+ ++++++.|+.++ .+.+||..+++. +..+. .+.....++++.. ++.+++.|+. ++.+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT-TSCEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC-CCCEEEeCCCCCCceE
Confidence 456667 888888886543 588999887653 22222 2333334466666 8888888884 56899
Q ss_pred EEECCCCeEEEeccCCCC-ceEEEEEeCCCCCEEEEEe-CC-----CeEEEEEcccCCceeEEE---ecCCCcEEEEEEe
Q 038802 162 FWDVAGESVVLDLFGHKD-YVRCGDCSPVNGDMFVTGS-YD-----HTVKLWDVRVENSKSVME---VNHGKPIEDVMFL 231 (532)
Q Consensus 162 iwd~~~~~~~~~~~~~~~-~v~~i~~~~~~~~~l~s~s-~d-----g~i~iwd~~~~~~~~~~~---~~~~~~v~~i~~~ 231 (532)
+||..+.+-...-..+.. .-.++++.+ ++++++.|+ .+ ..+.+||..+..-...-. ......-....+.
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred EecCcCCceeECCCCCccccccceEEec-CCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceee
Confidence 999987754332211111 112455556 788999988 44 468999987643222100 0000000001112
Q ss_pred cCCCEEEEEc----------CCeEEEEEccCCCeeeEEccCCC---------cceEEEEEeccCCCCCccccccEEEEEe
Q 038802 232 PSGGLIATAG----------GNSVKIWDLIGGGKMVYSMESHN---------KTVTSVCVGRVGNESGEEAMQYRILSVA 292 (532)
Q Consensus 232 ~~~~~l~~~~----------d~~i~iwd~~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~~~~~~~~~~l~s~~ 292 (532)
.++.+++.++ ...+..||..+..- ......+. ..-.++.+...+ +.+++.|+
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w-~~~~~~~~~~~~~~~~~~~~~av~~~~~~--------~~i~v~GG 418 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD-VKSAGKRQSNRGVAPDAMCGNAVMYDAVK--------GKILTFGG 418 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE-EEEEEECEETTEECCCCBTCEEEEEETTT--------TEEEEECC
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcce-eecCCccccccccCCCCCCCceEeccCCC--------CeEEEEeC
Confidence 2344333332 34678888876531 11111111 122344443322 56778887
Q ss_pred cCC-----------eEEEEECCCceEEEee--e--cCCCeeEEEEecCCCEEEEEecC-----------CcEEEEeecCc
Q 038802 293 LDG-----------YMKVFDYGKMKVTHSM--R--FPAPLMSVAFSPDCMTRVIGTSN-----------GTIFAGRRKKK 346 (532)
Q Consensus 293 ~dg-----------~i~iwd~~~~~~~~~~--~--~~~~v~~~~~s~~~~~l~~g~~d-----------g~i~iw~~~~~ 346 (532)
.++ .+.+||..+..-.... . ....-.+++..|+|+.++.|+.+ ..+.+||..+.
T Consensus 419 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 419 SPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp BSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred CCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 543 6888898876554432 2 22223455677899999999865 45788887664
Q ss_pred c
Q 038802 347 E 347 (532)
Q Consensus 347 ~ 347 (532)
+
T Consensus 499 ~ 499 (656)
T 1k3i_A 499 T 499 (656)
T ss_dssp E
T ss_pred c
Confidence 3
No 289
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.30 E-value=0.0019 Score=60.70 Aligned_cols=228 Identities=9% Similarity=0.044 Sum_probs=130.0
Q ss_pred ccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEee---ccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCce
Q 038802 51 VSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAIS---SFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTP 127 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~ 127 (532)
...+.+|.|++ +. +++++..+.|.. ..+.++.-.... .+...+..+.+.+++..++++. +|.|.. ..+.++.
T Consensus 79 ~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~-S~DgG~t 153 (327)
T 2xbg_A 79 DYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYR-TKDSGKN 153 (327)
T ss_dssp CCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEE-ESSTTSS
T ss_pred CccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEE-EcCCCCC
Confidence 44688999986 33 445566675554 333343322222 2334577888877777777665 554432 2222332
Q ss_pred EE-EecCCCCCEEEEEeecCCCcEEEEEeCCCeEEE-EEC--CCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeE
Q 038802 128 LR-RLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKF-WDV--AGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTV 203 (532)
Q Consensus 128 ~~-~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~i-wd~--~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i 203 (532)
-. ....+...+..+.+.+ ++.+++.+. +|.+.. +|- .+-+.+. ......+..+.+.+ ++.++ .++.+|.+
T Consensus 154 W~~~~~~~~~~~~~~~~~~-~~~~~~~g~-~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~-~g~~~-~~~~~G~~ 227 (327)
T 2xbg_A 154 WQALVQEAIGVMRNLNRSP-SGEYVAVSS-RGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTP-DGRLW-MIVNGGKI 227 (327)
T ss_dssp EEEEECSCCCCEEEEEECT-TSCEEEEET-TSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECT-TSCEE-EEETTTEE
T ss_pred CEEeecCCCcceEEEEEcC-CCcEEEEEC-CCcEEEEeCCCCCceeECC--CCCCCccceeEECC-CCCEE-EEeCCceE
Confidence 22 2234566789999998 676666554 454443 442 2223332 23456788888888 66655 45567887
Q ss_pred EEEEcccCCceeEEEe---cCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEcc---CCCcceEEEEEeccCC
Q 038802 204 KLWDVRVENSKSVMEV---NHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSME---SHNKTVTSVCVGRVGN 277 (532)
Q Consensus 204 ~iwd~~~~~~~~~~~~---~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~---~~~~~i~~~~~~~~~~ 277 (532)
++.+...+..-..... .....+.++.+.+++.+++++.++.+ .+....+ ..-..+. .....+.++.+.++
T Consensus 228 ~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG-~tW~~~~~~~~~~~~~~~v~~~~~-- 303 (327)
T 2xbg_A 228 AFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGG-QTWQQDVDVKKVPSNFYKILFFSP-- 303 (327)
T ss_dssp EEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTT-SSCEECGGGTTSSSCCCEEEEEET--
T ss_pred EEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCC-cccEEcCccCCCCCCeEEEEEECC--
Confidence 7764221111011111 12345889999988888888888776 3443333 3333232 23456788888744
Q ss_pred CCCccccccEEEEEecCCeEEEEE
Q 038802 278 ESGEEAMQYRILSVALDGYMKVFD 301 (532)
Q Consensus 278 ~~~~~~~~~~l~s~~~dg~i~iwd 301 (532)
..+++++.+|.|.-++
T Consensus 304 --------~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 304 --------DQGFILGQKGILLRYV 319 (327)
T ss_dssp --------TEEEEECSTTEEEEEC
T ss_pred --------CceEEEcCCceEEEEc
Confidence 3577778899877665
No 290
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.25 E-value=0.0033 Score=64.64 Aligned_cols=227 Identities=9% Similarity=-0.013 Sum_probs=142.2
Q ss_pred eEEEEEeCCeEEEEeCCCceEEEEeec-cCceeEEEEEccCCCEEE-EEcCCCCEEEEECCCCceEEEecCCCCCEEEEE
Q 038802 65 HLFAATHSASLTLFSSQTLEKHSAISS-FKDVVTCSSFRPDGSLLA-ASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVK 142 (532)
Q Consensus 65 ~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~ 142 (532)
+|+.+ ..+.|+..++.+......+.. .-..+..++|++.+..|+ +-..++.|..+++........+.........++
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlA 86 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMA 86 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEE
Confidence 45444 668899999986554333321 234678999998655555 555678899999876544444433334567788
Q ss_pred eecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEE-eCCCeEEEEEcccCCceeEEEecC
Q 038802 143 YPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTG-SYDHTVKLWDVRVENSKSVMEVNH 221 (532)
Q Consensus 143 ~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~ 221 (532)
+.+..+++.++-...+.|.+.++........+...-.....+++.|..+.++++- +..+.|...++......... ..
T Consensus 87 vD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~--~~ 164 (628)
T 4a0p_A 87 VDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV--PN 164 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE--CS
T ss_pred EEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE--CC
Confidence 8764566666767778999999875533222223344568999998445444443 22567888887653332222 34
Q ss_pred CCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEE
Q 038802 222 GKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKV 299 (532)
Q Consensus 222 ~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~i 299 (532)
......+++++++..|..+. .+.|..+|+...... .+........++++.. +..+++-...+.|..
T Consensus 165 ~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~--v~~~~l~~P~glav~~----------~~ly~tD~~~~~I~~ 232 (628)
T 4a0p_A 165 VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE--VIADDLPHPFGLTQYQ----------DYIYWTDWSRRSIER 232 (628)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEEECCSCEEEEEEET----------TEEEEEETTTTEEEE
T ss_pred CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE--EeeccCCCceEEEEEC----------CEEEEecCCCCEEEE
Confidence 55678999999777666665 578999998754332 2222223345676653 244555555788888
Q ss_pred EECCCce
Q 038802 300 FDYGKMK 306 (532)
Q Consensus 300 wd~~~~~ 306 (532)
.|..+++
T Consensus 233 ~dk~tg~ 239 (628)
T 4a0p_A 233 ANKTSGQ 239 (628)
T ss_dssp EETTTCC
T ss_pred EECCCCC
Confidence 8876554
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.22 E-value=0.00067 Score=63.07 Aligned_cols=184 Identities=13% Similarity=0.179 Sum_probs=118.1
Q ss_pred CCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccC----CC---EEEEEc-C--CCCEEEEECC--CCceEE
Q 038802 62 TTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPD----GS---LLAASD-L--SGLIQVFDVK--SRTPLR 129 (532)
Q Consensus 62 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~g~-~--dg~i~iwd~~--~~~~~~ 129 (532)
..+.++.....+-+.+||+ +++.+..+.. +.++.+...|+ |+ ++++.. . +++|.+|++. ++ .+.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-cee
Confidence 3445666666789999999 7888888754 56777777663 22 233333 3 5789999773 33 354
Q ss_pred EecC------CC-CCEEEEEe--ecCCC-cEEEEEeCCCeEEEEECC-------CCeEEEeccCCCCceEEEEEeCCCCC
Q 038802 130 RLKS------HT-RPVRFVKY--PFLDK-LHLVSGGDDGIVKFWDVA-------GESVVLDLFGHKDYVRCGDCSPVNGD 192 (532)
Q Consensus 130 ~~~~------h~-~~i~~~~~--~~~~~-~~l~s~s~dg~i~iwd~~-------~~~~~~~~~~~~~~v~~i~~~~~~~~ 192 (532)
.+.. .. ..+..+|+ +|..+ .++++...+|.+..|++. +.+.++++.. ...+..+.+.+ ...
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd-~~g 192 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADD-EYG 192 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEET-TTT
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcC-CCC
Confidence 4421 11 44555666 66334 368888899999999882 3355666654 35677888888 778
Q ss_pred EEEEEeCCCeEEEEEcccCC---ceeEEEecCC---CcEEEEEEe--cCCC-EEEEEc--CCeEEEEEcc
Q 038802 193 MFVTGSYDHTVKLWDVRVEN---SKSVMEVNHG---KPIEDVMFL--PSGG-LIATAG--GNSVKIWDLI 251 (532)
Q Consensus 193 ~l~s~s~dg~i~iwd~~~~~---~~~~~~~~~~---~~v~~i~~~--~~~~-~l~~~~--d~~i~iwd~~ 251 (532)
.|+.+-.+.-|..+|.+-.. ...+...... ..+..+++. ++++ +|++++ ++...+||..
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 88889888776666644221 2222222222 468888885 4445 555555 6799999975
No 292
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.20 E-value=0.0031 Score=66.43 Aligned_cols=229 Identities=11% Similarity=0.006 Sum_probs=139.4
Q ss_pred EEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC----eEEEeccCCCCceE
Q 038802 107 LLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE----SVVLDLFGHKDYVR 182 (532)
Q Consensus 107 ~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~----~~~~~~~~~~~~v~ 182 (532)
+|+.+. ...|+..++.......... ....+..++|.+.++.++++-...+.|+.+++... .....+........
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 344333 4568888887655444443 45567899999855556666666788999998753 22222332334566
Q ss_pred EEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc--C-CeEEEEEccCCCeeeEE
Q 038802 183 CGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG--G-NSVKIWDLIGGGKMVYS 259 (532)
Q Consensus 183 ~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d-~~i~iwd~~~~~~~~~~ 259 (532)
.|++.+..++++++-...+.|.+.++.... ...+..........|+++|.+..|+.+. . +.|...++... .....
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~-~~~~l 552 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSL 552 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEE
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC-ceEEE
Confidence 888987455677777778899999987533 3333323445678999999755555444 3 67888888654 32223
Q ss_pred ccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeec---CCCeeEEEEecCCCEEEEEecCC
Q 038802 260 MESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRF---PAPLMSVAFSPDCMTRVIGTSNG 336 (532)
Q Consensus 260 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~g~~dg 336 (532)
+...-.....|++.+.+ +.++++-...+.|..+++........... -....+|++..+ .++++-...+
T Consensus 553 v~~~l~~P~GLavD~~~--------~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~ 623 (791)
T 3m0c_C 553 VTENIQWPNGITLDLLS--------GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINE 623 (791)
T ss_dssp ECSSCSCEEEEEEETTT--------TEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTT
T ss_pred EeCCCCCceEEEEecCC--------CeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCC
Confidence 33333567899999774 44555555567899999876443333332 123456666433 3444444567
Q ss_pred cEEEEeecCccc
Q 038802 337 TIFAGRRKKKEN 348 (532)
Q Consensus 337 ~i~iw~~~~~~~ 348 (532)
.|...+..+++.
T Consensus 624 ~I~~~dk~tG~~ 635 (791)
T 3m0c_C 624 AIFSANRLTGSD 635 (791)
T ss_dssp EEEEEETTTCCC
T ss_pred EEEEEeCCCCcc
Confidence 787777655543
No 293
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.16 E-value=0.0028 Score=65.19 Aligned_cols=229 Identities=6% Similarity=-0.028 Sum_probs=142.8
Q ss_pred EEEEEcCCCCEEEEECCCCceEEEec-CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEE
Q 038802 107 LLAASDLSGLIQVFDVKSRTPLRRLK-SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGD 185 (532)
Q Consensus 107 ~l~~g~~dg~i~iwd~~~~~~~~~~~-~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~ 185 (532)
+|+.+ ..+.|+..++.+......+. ..-..+..++|++.++..+++-..++.|..+++........+.........++
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlA 86 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMA 86 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEE
Confidence 34443 35679999998655433332 22346789999985566666666789999999876543333332224466888
Q ss_pred EeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc---CCeEEEEEccCCCeeeEEccC
Q 038802 186 CSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG---GNSVKIWDLIGGGKMVYSMES 262 (532)
Q Consensus 186 ~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~---d~~i~iwd~~~~~~~~~~~~~ 262 (532)
+.+..++++++-...+.|.+.++..... ..+....-.....++++|....|..+. .+.|...++.... ...+..
T Consensus 87 vD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~--~~~l~~ 163 (628)
T 4a0p_A 87 VDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE--RTTLVP 163 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSTTC-EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--CEEEEC
T ss_pred EEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc--eEEEEC
Confidence 8874566667766778899999875432 222223345568999998544444443 3578888876542 222222
Q ss_pred CCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEe
Q 038802 263 HNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGR 342 (532)
Q Consensus 263 ~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~ 342 (532)
.-.....+++++++ +.++++-...+.|..+|+...........-....++++.. +..+++-...+.|...+
T Consensus 164 ~~~~P~GlalD~~~--------~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 164 NVGRANGLTIDYAK--------RRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp SCSSEEEEEEETTT--------TEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred CCCCcceEEEcccc--------CEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence 34567899999874 4555555667889999987643321222233456788765 34444545578888888
Q ss_pred ecCccc
Q 038802 343 RKKKEN 348 (532)
Q Consensus 343 ~~~~~~ 348 (532)
..+++.
T Consensus 235 k~tg~~ 240 (628)
T 4a0p_A 235 KTSGQN 240 (628)
T ss_dssp TTTCCS
T ss_pred CCCCCc
Confidence 666543
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.16 E-value=0.004 Score=63.96 Aligned_cols=286 Identities=8% Similarity=-0.033 Sum_probs=156.7
Q ss_pred cCeeEEEEcCCCCeEEEEE-eCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcC--CCCEEEEECCCCceE
Q 038802 52 SSINSIVFSPTTSHLFAAT-HSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDL--SGLIQVFDVKSRTPL 128 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~--dg~i~iwd~~~~~~~ 128 (532)
.....+++.+.+..|+.+. ..+.|.+.+.........+...-.....+++.|.+..|+.... .+.|...+++.....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 4678899998666555554 4689999998754333333233455778999997555555442 456777776643333
Q ss_pred EEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEc
Q 038802 129 RRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDV 208 (532)
Q Consensus 129 ~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~ 208 (532)
......-.....+++++.++.+.++-+..+.|...|+..........+......++++.. +.++++-...+.|...|.
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~--~~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSILACNK 241 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESS--SEEEEECTTTCSEEEEES
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeC--CEEEEecCCCCEEEEEEC
Confidence 333334456789999984455555555677899999875443222221112223566654 355555556677888887
Q ss_pred ccCCceeEEE----------ecCC--------------CcEEEEEE-----------ecCC---------------CEEE
Q 038802 209 RVENSKSVME----------VNHG--------------KPIEDVMF-----------LPSG---------------GLIA 238 (532)
Q Consensus 209 ~~~~~~~~~~----------~~~~--------------~~v~~i~~-----------~~~~---------------~~l~ 238 (532)
.+++....+. .-|. +....+++ .|.| .+|+
T Consensus 242 ~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll 321 (619)
T 3s94_A 242 YTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLL 321 (619)
T ss_dssp SSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEE
T ss_pred CCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEE
Confidence 6543221110 0000 00111111 1111 1344
Q ss_pred EEcCCeEEEEEccCCCeeeEEcc-CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeeec-CCC
Q 038802 239 TAGGNSVKIWDLIGGGKMVYSME-SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRF-PAP 316 (532)
Q Consensus 239 ~~~d~~i~iwd~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~ 316 (532)
.+..+.|+..++.........+. ..-..+.++.+.+.+ +.++++-...+.|+.+++........+.. -..
T Consensus 322 ~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~--------~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~ 393 (619)
T 3s94_A 322 LARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVE--------GYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAH 393 (619)
T ss_dssp EEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTT--------TEEEEEETTTTEEEEEETTSCSCEEEECSSCSC
T ss_pred EEcccceEEEecCCCccceeEEeccccCccEEEEEEcCC--------CeEEEEeCCCCeEEEEEcCCCccEEEEECCCCC
Confidence 44445566666654321111111 112346778888753 44555555678899998876433333322 246
Q ss_pred eeEEEEecCCCEEE-EEecCCcEEEEeecCcc
Q 038802 317 LMSVAFSPDCMTRV-IGTSNGTIFAGRRKKKE 347 (532)
Q Consensus 317 v~~~~~s~~~~~l~-~g~~dg~i~iw~~~~~~ 347 (532)
+..+++.+.+..|+ +-+..+.|.+.+++...
T Consensus 394 p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~ 425 (619)
T 3s94_A 394 PDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM 425 (619)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred cCceEEecccCcEEEEeCCCCcEEEEeCCCCe
Confidence 77899997555554 44556788888877653
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.14 E-value=0.0037 Score=61.58 Aligned_cols=155 Identities=10% Similarity=0.089 Sum_probs=97.9
Q ss_pred CeeEEEEcC-CCCeEEEEEe-CCeEEEEeCCCceEEEEeecc---CceeEEEEE-------ccCCCEEEEEcCCC-C---
Q 038802 53 SINSIVFSP-TTSHLFAATH-SASLTLFSSQTLEKHSAISSF---KDVVTCSSF-------RPDGSLLAASDLSG-L--- 116 (532)
Q Consensus 53 ~V~~i~~sp-~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~g~~dg-~--- 116 (532)
....|+|+| +...|+++.. .+.|++.|..++......... ......++| +++|++|+++...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899999 3555555554 467999998887766554332 235889999 99999666665443 2
Q ss_pred ---EEEEECCC-CceE-----EEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECC-------CCeE----------
Q 038802 117 ---IQVFDVKS-RTPL-----RRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVA-------GESV---------- 170 (532)
Q Consensus 117 ---i~iwd~~~-~~~~-----~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~-------~~~~---------- 170 (532)
|.+++... +... ..+.... ....++++|.++.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 66665433 1211 1221111 234667888556666677788899999987 4443
Q ss_pred ----EEeccCCCCceEEEEEeCCCCCE-EEEEeCCCeEEEEEccc
Q 038802 171 ----VLDLFGHKDYVRCGDCSPVNGDM-FVTGSYDHTVKLWDVRV 210 (532)
Q Consensus 171 ----~~~~~~~~~~v~~i~~~~~~~~~-l~s~s~dg~i~iwd~~~ 210 (532)
+... +.......++|+| +++. +++-+..+.|+.+|...
T Consensus 299 ~~~~l~~~-~~~~~p~~ia~~p-~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 299 TFKQLFTI-ADPSWEFQIFIHP-TGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp TEEEEEEC-SSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEET
T ss_pred ccceeEec-CCCCCceEEEEcC-CCCEEEEEeCCCCEEEEEecCC
Confidence 1122 2234457899999 8885 45555677899877653
No 296
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.13 E-value=0.0026 Score=59.12 Aligned_cols=196 Identities=11% Similarity=0.164 Sum_probs=124.5
Q ss_pred CCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCC----c---EEEEEe-C--CCeEEEEECC--CCeEE
Q 038802 104 DGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDK----L---HLVSGG-D--DGIVKFWDVA--GESVV 171 (532)
Q Consensus 104 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~----~---~l~s~s-~--dg~i~iwd~~--~~~~~ 171 (532)
...+++.....+-+.+||+ +++.+..+.. +.++.+..-| +- . ++++.. . +++|.+|++. ++. +
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~-~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l 113 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRY-DFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-L 113 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEE-EEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-E
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEec-ccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-e
Confidence 3445666666778999999 7888888763 5677777665 21 1 233333 3 5789999773 333 4
Q ss_pred EeccC------CC-CceEEEEE--eCCCCC-EEEEEeCCCeEEEEEcccC-----CceeEEEecCCCcEEEEEEecCCCE
Q 038802 172 LDLFG------HK-DYVRCGDC--SPVNGD-MFVTGSYDHTVKLWDVRVE-----NSKSVMEVNHGKPIEDVMFLPSGGL 236 (532)
Q Consensus 172 ~~~~~------~~-~~v~~i~~--~~~~~~-~l~s~s~dg~i~iwd~~~~-----~~~~~~~~~~~~~v~~i~~~~~~~~ 236 (532)
..+.. .. ..+..+++ +|..+. ++++...+|.+..|++... ....+..+...+.+..+...+....
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGR 193 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCe
Confidence 44421 11 44556676 663343 6788888999999998431 1233344556778999999998788
Q ss_pred EEEEc-CCeEEEEEccCC----CeeeEEcc-CC-CcceEEEEEe--ccCCCCCccccccEEEEEe-cCCeEEEEECC-Cc
Q 038802 237 IATAG-GNSVKIWDLIGG----GKMVYSME-SH-NKTVTSVCVG--RVGNESGEEAMQYRILSVA-LDGYMKVFDYG-KM 305 (532)
Q Consensus 237 l~~~~-d~~i~iwd~~~~----~~~~~~~~-~~-~~~i~~~~~~--~~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~-~~ 305 (532)
|+.+. +..|..++.... ...+..+. ++ ...+..+++- +++ ..+|++++ .++++.+||.. +.
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g--------~gyLivSsQG~~s~~Vydr~~~~ 265 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADG--------KGYLMASSQGNSSYAIYDRQGKN 265 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGG--------CEEEEEEEGGGTEEEEEESSTTC
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCC--------CEEEEEEcCCCCEEEEEECCCCC
Confidence 88887 555666664411 24554442 22 2367888885 332 22555555 67899999996 67
Q ss_pred eEEEeee
Q 038802 306 KVTHSMR 312 (532)
Q Consensus 306 ~~~~~~~ 312 (532)
+.+..|.
T Consensus 266 ~~vg~f~ 272 (355)
T 3amr_A 266 KYVADFR 272 (355)
T ss_dssp CEEEEEE
T ss_pred cEEEEEE
Confidence 7777775
No 297
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.09 E-value=0.023 Score=62.55 Aligned_cols=284 Identities=10% Similarity=0.065 Sum_probs=160.6
Q ss_pred ccCeeEEEEcCC------CCeEEEEEe-CCeEEEEeCCCceEEEEeecc-CceeEEEEEc--cCCCEEEEEcCCCCEEEE
Q 038802 51 VSSINSIVFSPT------TSHLFAATH-SASLTLFSSQTLEKHSAISSF-KDVVTCSSFR--PDGSLLAASDLSGLIQVF 120 (532)
Q Consensus 51 ~~~V~~i~~sp~------~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~~--~~~~~l~~g~~dg~i~iw 120 (532)
.+.|.|+++.|. ++++++|.. |++|+|+++.+.+.+....-. .....++.+. ....+|..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 458999999864 368899986 999999999887665443221 1233344333 234678899999987666
Q ss_pred ECC--CCceEEE--ecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEE-EEEeCCC-CCEE
Q 038802 121 DVK--SRTPLRR--LKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRC-GDCSPVN-GDMF 194 (532)
Q Consensus 121 d~~--~~~~~~~--~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~-i~~~~~~-~~~l 194 (532)
.++ ++..... ..-...++.-..+...++..++++| +....++.-+..-....+. ...+.+ ..|+... ++-+
T Consensus 633 ~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~~~l~~s~l~--~~~v~~~~~F~se~~~~g~ 709 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACS-DRPTVIYSSNHKLVFSNVN--LKEVNYMCPLNSDGYPDSL 709 (1158)
T ss_dssp EECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEES-SSCEEEEESSSSEEEEEBS--SSCCCEEEEECCSSSTTEE
T ss_pred EEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEEC-CCCEEEEEcCCceEEeccC--hHHhceEeccCcccCCCcE
Confidence 553 4443321 1122445555555432333444444 3444444433221222221 122323 3343311 3445
Q ss_pred EEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C-------------------------------
Q 038802 195 VTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G------------------------------- 242 (532)
Q Consensus 195 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d------------------------------- 242 (532)
+..+ ++.++|..+..........++-+..+..++++|..+.++.+. +
T Consensus 710 v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1158)
T 3ei3_A 710 ALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKL 788 (1158)
T ss_dssp EEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCC
T ss_pred EEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccccc
Confidence 5444 456999888665555666667778889999998776544332 1
Q ss_pred ------------------CeEEEEEccCCCeeeEEccC-CCcceEEEEEeccCCCCCccccccEEEEEe----------c
Q 038802 243 ------------------NSVKIWDLIGGGKMVYSMES-HNKTVTSVCVGRVGNESGEEAMQYRILSVA----------L 293 (532)
Q Consensus 243 ------------------~~i~iwd~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~----------~ 293 (532)
+.|++.|..+. +.+..+.- ....+.+++...-.. ....+++.|. .
T Consensus 789 ~~~~~~~~~~~~g~~~~~s~i~lidp~t~-~~i~~~~l~~nE~~~sv~~v~~~~-----~~~~~lvVGTa~~~~~e~~~~ 862 (1158)
T 3ei3_A 789 FSSSTAPHETSFGEEVEVHNLLIIDQHTF-EVLHAHQFLQNEYALSLVSCKLGK-----DPNTYFIVGTAMVYPEEAEPK 862 (1158)
T ss_dssp C----------CCCEEEEEEEEEEETTTC-CEEEEEECCTTEEEEEEEEECCTT-----CCCCEEEEEEEECCTTCSSCC
T ss_pred ccccccCchhhcCCceeeEEEEEEeCCCC-eEEEEEeCCCCcceEEEEEEEEcc-----CCCEEEEEEeeecCCCCCCCC
Confidence 13555665444 33333221 223445555433211 0146777776 3
Q ss_pred CCeEEEEECCCc--eEEEeeecCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcc
Q 038802 294 DGYMKVFDYGKM--KVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKE 347 (532)
Q Consensus 294 dg~i~iwd~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~ 347 (532)
.|.|.+|++..+ +.++.....++|++++-- +| +|++|- ...|++|++..++
T Consensus 863 ~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 863 QGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEK 915 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTS
T ss_pred ceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEc-CCEEEEEECCCCc
Confidence 588999998654 444555578899998744 34 555443 4689999998664
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.08 E-value=1.3e-05 Score=83.77 Aligned_cols=240 Identities=10% Similarity=-0.043 Sum_probs=139.1
Q ss_pred eCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEE-cCCCCEEEEECCC----CceEEEecCCCCCEEEEEeec
Q 038802 71 HSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAAS-DLSGLIQVFDVKS----RTPLRRLKSHTRPVRFVKYPF 145 (532)
Q Consensus 71 ~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~----~~~~~~~~~h~~~i~~~~~~~ 145 (532)
..+.|+..++.+......+.. ...+..++|.+.+..|+.+ ...+.|..+++.. ......+.........+++.+
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred CccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 346788888876655444433 2356688999876666655 4567899999875 222222221222345677775
Q ss_pred CCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCC-CeEEEEEcccCCceeEEEecCCCc
Q 038802 146 LDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYD-HTVKLWDVRVENSKSVMEVNHGKP 224 (532)
Q Consensus 146 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~d-g~i~iwd~~~~~~~~~~~~~~~~~ 224 (532)
..+.++++-...+.|.++++........+.........+++.|..+.++++-... +.|..+++.... ...+....-..
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~ 541 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQW 541 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSS
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCC
Confidence 3566666666678999999876544433333334456788988445555544333 678888876422 22221122334
Q ss_pred EEEEEEecCCCEEEEE-c-CCeEEEEEccCCCeeeEEcc--CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEE
Q 038802 225 IEDVMFLPSGGLIATA-G-GNSVKIWDLIGGGKMVYSME--SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVF 300 (532)
Q Consensus 225 v~~i~~~~~~~~l~~~-~-d~~i~iwd~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iw 300 (532)
...|+|+|++..|+.+ . .+.|..+|+... .....+. ........+++.. ..++++....+.|..+
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~~~P~glavd~----------~~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVFE----------DKVFWTDIINEAIFSA 610 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSSS-CCEEECCCSSSCSSCCCCEEET----------TEEEEECSTTTCEEEE
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCCC-ceEEEEecCCcCCCceEeEEEC----------CEEEEEeCCCCeEEEE
Confidence 5689999876544444 4 578999998643 2222221 1112233444432 3456666677899999
Q ss_pred ECCCceEEEeeecC-CCeeEEEEe
Q 038802 301 DYGKMKVTHSMRFP-APLMSVAFS 323 (532)
Q Consensus 301 d~~~~~~~~~~~~~-~~v~~~~~s 323 (532)
|..+++.+..+... ..++.+++.
T Consensus 611 d~~~G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 611 NRLTGSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp ETTTEEEEECCCTTCSSCCCCCBC
T ss_pred EccCCCceEEeecCCCCCcEEEEe
Confidence 99888888777532 234444433
No 299
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.03 E-value=0.0079 Score=57.10 Aligned_cols=223 Identities=17% Similarity=0.134 Sum_probs=122.0
Q ss_pred ceeEEEEEccCCCEEEEEcCCCCEEEEECCCCce--EEEec---CCCCCEEEEEeecCC----CcEEEEEeCC-----Ce
Q 038802 94 DVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTP--LRRLK---SHTRPVRFVKYPFLD----KLHLVSGGDD-----GI 159 (532)
Q Consensus 94 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~--~~~~~---~h~~~i~~~~~~~~~----~~~l~s~s~d-----g~ 159 (532)
.....++|.|+|+++++ ..+|.|.+++ +++. +..+. ........++|+| + +.+.++-+.+ +.
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~p-df~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHP-RFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECT-TTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECC-CCCCCCEEEEEEecCCCCCccE
Confidence 45678999999985555 4569999998 3432 22221 1245678999998 5 4444444332 67
Q ss_pred EEEEECCCCe-----EEE-ecc---CCCCceEEEEEeCCCCCEEEEEeC-------------CCeEEEEEcccC------
Q 038802 160 VKFWDVAGES-----VVL-DLF---GHKDYVRCGDCSPVNGDMFVTGSY-------------DHTVKLWDVRVE------ 211 (532)
Q Consensus 160 i~iwd~~~~~-----~~~-~~~---~~~~~v~~i~~~~~~~~~l~s~s~-------------dg~i~iwd~~~~------ 211 (532)
|..|+...+. .+. .+. ........++|.| ++.+.++.+. .|.|.-+|....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 8888876431 121 122 1112235789999 8876666432 245666665430
Q ss_pred ------CceeEEEecCCCcEEEEEEec-CCCEEEEEcC-CeE------EEEEccCCC-----------------eeeEEc
Q 038802 212 ------NSKSVMEVNHGKPIEDVMFLP-SGGLIATAGG-NSV------KIWDLIGGG-----------------KMVYSM 260 (532)
Q Consensus 212 ------~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~d-~~i------~iwd~~~~~-----------------~~~~~~ 260 (532)
.....+..++ .....++|+| ++.++++-.. +.+ .+.-+..+. .++..+
T Consensus 186 f~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 186 FLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred ccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec
Confidence 1122333333 3456789999 6666655442 231 122222221 122333
Q ss_pred cCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCce-------EEEeeecCCCeeEEEEecCCCEEEEEe
Q 038802 261 ESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMK-------VTHSMRFPAPLMSVAFSPDCMTRVIGT 333 (532)
Q Consensus 261 ~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-------~~~~~~~~~~v~~~~~s~~~~~l~~g~ 333 (532)
..| .....++|. + +.++++.-..+.|...++.... ....+.....+..+++.|||...++..
T Consensus 265 ~~~-~ap~G~~~~-~---------G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 PQG-FPPGNLAFF-R---------GDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TTC-CCEEEEEEE-T---------TEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CCC-CCCcceEEE-C---------CEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 222 234566662 2 4455555556777777765432 111122335788999999997766654
No 300
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.02 E-value=0.031 Score=61.58 Aligned_cols=175 Identities=10% Similarity=0.063 Sum_probs=110.2
Q ss_pred eEEEEECCCCeEEEeccC-CCCceEEEEEeC---CCCCEEEEEe----------CCCeEEEEEcccCCceeEEEecCCCc
Q 038802 159 IVKFWDVAGESVVLDLFG-HKDYVRCGDCSP---VNGDMFVTGS----------YDHTVKLWDVRVENSKSVMEVNHGKP 224 (532)
Q Consensus 159 ~i~iwd~~~~~~~~~~~~-~~~~v~~i~~~~---~~~~~l~s~s----------~dg~i~iwd~~~~~~~~~~~~~~~~~ 224 (532)
.|++.|..+.+.+..+.- ....+.|++... ....+++.|+ ..|.|.+|++...+..........++
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 467777777766655432 233455555432 1246888886 34789999997554555555566788
Q ss_pred EEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEE--EC
Q 038802 225 IEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVF--DY 302 (532)
Q Consensus 225 v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iw--d~ 302 (532)
|++++-- +| .|+++-+..+++|++............+ ..+..+..... +++++.|..-..|.++ +.
T Consensus 888 v~al~~~-~g-~Lla~ig~~l~vy~l~~~~~L~~~~~~~-~~i~~~~l~~~---------~~~I~vgD~~~Sv~~~~y~~ 955 (1158)
T 3ei3_A 888 VYSMVEF-NG-KLLASINSTVRLYEWTTEKELRTECNHY-NNIMALYLKTK---------GDFILVGDLMRSVLLLAYKP 955 (1158)
T ss_dssp EEEEEEE-TT-EEEEEETTEEEEEEECTTSCEEEEEEEC-CCSCEEEEEEE---------TTEEEEEESSBCEEEEEEET
T ss_pred CEEEeee-CC-EEEEEcCCEEEEEECCCCceEEEEeecc-ccEEEEEEecc---------CCEEEEEEhhheEEEEEEEc
Confidence 9988754 44 5666667899999997653222111111 11222222222 4678888877776665 44
Q ss_pred CCceEEEeee--cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCc
Q 038802 303 GKMKVTHSMR--FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 303 ~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~ 346 (532)
..++....-+ .+..++++.+-.+ ..++.+..+|+|.+.+.+..
T Consensus 956 ~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 956 MEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp TTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECTT
T ss_pred CCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCCC
Confidence 5555554444 4567888888755 47778999999999999874
No 301
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.01 E-value=0.0031 Score=59.92 Aligned_cols=219 Identities=16% Similarity=0.155 Sum_probs=118.0
Q ss_pred ccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceE--EEEee---ccCceeEEEEEccC---CCEEEEEcC-C-----CC
Q 038802 51 VSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEK--HSAIS---SFKDVVTCSSFRPD---GSLLAASDL-S-----GL 116 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l~~g~~-d-----g~ 116 (532)
-..-..++|.|+|+ ++++..+|.|++++ +++. +..+. ........++|+|+ +..|+++.. . +.
T Consensus 30 l~~P~~ia~~pdG~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCe-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 33567999999998 55667779999998 3432 22121 12356789999998 555555433 2 56
Q ss_pred EEEEECCCCc-----e-EEEec---CCCCCEEEEEeecCCCcEEEEEeC-------------CCeEEEEECCCC------
Q 038802 117 IQVFDVKSRT-----P-LRRLK---SHTRPVRFVKYPFLDKLHLVSGGD-------------DGIVKFWDVAGE------ 168 (532)
Q Consensus 117 i~iwd~~~~~-----~-~~~~~---~h~~~i~~~~~~~~~~~~l~s~s~-------------dg~i~iwd~~~~------ 168 (532)
|..|+...+. . +..+. +.......++|.| ++.+.++.+. .|.|..++....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 8888876431 1 12232 1111235799999 7766665432 256666665431
Q ss_pred -------e-EEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeE------EEEEcccCC----------------ceeEEE
Q 038802 169 -------S-VVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTV------KLWDVRVEN----------------SKSVME 218 (532)
Q Consensus 169 -------~-~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i------~iwd~~~~~----------------~~~~~~ 218 (532)
. .+. ..++. ....++|+|.++.++++-.....+ .+.-+..+. ......
T Consensus 186 f~~~~~~~~~i~-a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~ 263 (352)
T 2ism_A 186 FLGRRGARPEVY-SLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYF 263 (352)
T ss_dssp TTTCTTSCTTEE-EECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEE
T ss_pred ccCCCCCCccEE-EEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEe
Confidence 0 111 12232 245688888445555543332221 122222221 112222
Q ss_pred ecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCee-----eEEccCCCcceEEEEEeccC
Q 038802 219 VNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKM-----VYSMESHNKTVTSVCVGRVG 276 (532)
Q Consensus 219 ~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~-----~~~~~~~~~~i~~~~~~~~~ 276 (532)
..+......++| .+|.++++.- .+.|...++...... ...+......+..+++.|+|
T Consensus 264 ~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG 326 (352)
T 2ism_A 264 WPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDG 326 (352)
T ss_dssp CTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTS
T ss_pred cCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCC
Confidence 233345567777 4666666655 678888887644211 11121223567888888884
No 302
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.00 E-value=0.0015 Score=60.11 Aligned_cols=153 Identities=11% Similarity=0.136 Sum_probs=107.0
Q ss_pred eEEEEcCCCCeEEEEE-eCCeEEEEeCCCceEEEE-eec----cC--ceeEEEEE---ccCCCEEEEEc-----------
Q 038802 55 NSIVFSPTTSHLFAAT-HSASLTLFSSQTLEKHSA-ISS----FK--DVVTCSSF---RPDGSLLAASD----------- 112 (532)
Q Consensus 55 ~~i~~sp~~~~l~~~~-~d~~v~i~~~~~~~~~~~-~~~----~~--~~v~~~~~---~~~~~~l~~g~----------- 112 (532)
-+++|++....+..++ ..+.|..|+...+..... +.. .. ..+..+.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 4788988766777777 689999999875543333 221 11 14689999 68887777543
Q ss_pred --CCCCEEEEECC---CCceEEEec--C-----------CCCCEEEEEeecCCCcEEEEEeCC-CeEEEEECCCCeEEEe
Q 038802 113 --LSGLIQVFDVK---SRTPLRRLK--S-----------HTRPVRFVKYPFLDKLHLVSGGDD-GIVKFWDVAGESVVLD 173 (532)
Q Consensus 113 --~dg~i~iwd~~---~~~~~~~~~--~-----------h~~~i~~~~~~~~~~~~l~s~s~d-g~i~iwd~~~~~~~~~ 173 (532)
.+..+..||+. +++.+.... . -......++..+ +++..++++.. +.|...+..... +..
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~~-~~~ 173 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGKT-VST 173 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSCC-EEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCCE-Eee
Confidence 25679999998 777665443 1 113478999998 88888888888 888888876442 222
Q ss_pred cc------CCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEccc
Q 038802 174 LF------GHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRV 210 (532)
Q Consensus 174 ~~------~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~ 210 (532)
+. ......+.|+++| +++.|++....|.+..+|++.
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~p-dg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDP-HSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEET-TTTEEEEESSSSSEEEEECSS
T ss_pred eeecCCCcccccCcceEEEeC-CCCEEEEEcCCCeEEEEcCCC
Confidence 21 1112356899999 888888776799999999885
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.99 E-value=0.0045 Score=63.57 Aligned_cols=227 Identities=8% Similarity=-0.056 Sum_probs=129.0
Q ss_pred EEeCCeEEEEeCCCce-EEEEeeccCceeEEEEEccCCCEEEEE-cCCCCEEEEECCCCce-EEEecCCCCCEEEEEeec
Q 038802 69 ATHSASLTLFSSQTLE-KHSAISSFKDVVTCSSFRPDGSLLAAS-DLSGLIQVFDVKSRTP-LRRLKSHTRPVRFVKYPF 145 (532)
Q Consensus 69 ~~~d~~v~i~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~~~~-~~~~~~h~~~i~~~~~~~ 145 (532)
-.....|+..++.... ....+...-..+..++|++.+..|+.+ ...+.|..+++..... ...+.........+++.+
T Consensus 14 ~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~ 93 (619)
T 3s94_A 14 YANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 93 (619)
T ss_dssp EECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEET
T ss_pred EeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEe
Confidence 3446788888887543 222222234557899999866666654 4567888898875432 233333335688999988
Q ss_pred CCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEe-CCCeEEEEEcccCCceeEEEecCCCc
Q 038802 146 LDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGS-YDHTVKLWDVRVENSKSVMEVNHGKP 224 (532)
Q Consensus 146 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~ 224 (532)
.+++++++-...+.|.+.++........+...-.....+++.|..+.++++-- ..+.|...++.... ........-..
T Consensus 94 ~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~-~~~l~~~~~~~ 172 (619)
T 3s94_A 94 LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYW 172 (619)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSS
T ss_pred cCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc-eEEEEeCCCCC
Confidence 55666666667899999998765432223233445668999994444445432 24567777765432 22222233456
Q ss_pred EEEEEEecCCCEEEEEc--CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEEC
Q 038802 225 IEDVMFLPSGGLIATAG--GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDY 302 (532)
Q Consensus 225 v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 302 (532)
...+++++++..|..+. .+.|..+|+... .......+......++++.. +..+++-...+.|...|.
T Consensus 173 P~Glald~~~~~LY~aD~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gi~~~~----------~~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 173 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGT-NRQAVVKGSLPHPFALTLFE----------DILYWTDWSTHSILACNK 241 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTCCEEEESSSCC-EEC---------CCCEEESS----------SEEEEECTTTCSEEEEES
T ss_pred CcEEEEEccCCEEEEEeCCCCeEEEecCCCC-ccEEEEeCCCCCceEEEEeC----------CEEEEecCCCCEEEEEEC
Confidence 78999999766666555 578998888654 22222221111223455543 234455555678888887
Q ss_pred CCceE
Q 038802 303 GKMKV 307 (532)
Q Consensus 303 ~~~~~ 307 (532)
.+++.
T Consensus 242 ~tg~~ 246 (619)
T 3s94_A 242 YTGEG 246 (619)
T ss_dssp SSCCC
T ss_pred CCCcc
Confidence 76543
No 304
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.98 E-value=0.02 Score=60.67 Aligned_cols=265 Identities=10% Similarity=0.114 Sum_probs=153.2
Q ss_pred ccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEe-eccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEE
Q 038802 51 VSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAI-SSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLR 129 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~ 129 (532)
...|++|.-..+| ++..|+.+| +..||-.+.+..... ......|.++....+| .|..|+.+| +..||..+.+...
T Consensus 21 ~n~V~~I~qD~~G-~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~ 96 (758)
T 3ott_A 21 ASVVSCFLQDSEG-LIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQ 96 (758)
T ss_dssp CCCEEEEEECTTS-CEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECC
T ss_pred cceEEEEEECCCC-CEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEEC
Confidence 5679999999888 577788776 667774432211110 1123568888777666 566777666 7899987754322
Q ss_pred EecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec----cCCCCceEEEEEeCCCCCEEEEEeCCCeEEE
Q 038802 130 RLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL----FGHKDYVRCGDCSPVNGDMFVTGSYDHTVKL 205 (532)
Q Consensus 130 ~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~----~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~i 205 (532)
........|.++... ++ .|..++.+ .+..+|..+++..... ......|.++.... ++.+.+ |+.+| +..
T Consensus 97 ~~~~~~~~i~~i~~~--~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi-gt~~G-l~~ 169 (758)
T 3ott_A 97 PETDFPTDVRTMALQ--GD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTK-DNQIYV-GTYNG-LCR 169 (758)
T ss_dssp CSCCCCSCEEEEEEE--TT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECT-TCCEEE-EETTE-EEE
T ss_pred cccCCCceEEEEEec--CC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcC-CCCEEE-EeCCC-Hhh
Confidence 111123357776542 44 46666666 6888998776543321 11234678887766 566554 55544 777
Q ss_pred EEcccCCceeEEEec-----CCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCC
Q 038802 206 WDVRVENSKSVMEVN-----HGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESG 280 (532)
Q Consensus 206 wd~~~~~~~~~~~~~-----~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 280 (532)
+|..+..... .... ....|.++...+++..|..++++.+..+|..+. ............|.++....++
T Consensus 170 ~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g---- 243 (758)
T 3ott_A 170 YIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLFQYFPSTG-QIKQTEAFHNNSIKSLALDGNG---- 243 (758)
T ss_dssp EETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEEEEETTTT-EEEEEEEEEEEEEEEEEECTTC----
T ss_pred CccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEECCCCeEEcCCCC-eEEeccCCCCCeEEEEEEcCCC----
Confidence 8876532211 1111 122488888887776544455556888887654 3221111123457777766553
Q ss_pred ccccccEEEEEecCCeEEEEECCCceEEEeee--------cCCCeeEEEEecCCCEEEEEecCCcEEEE
Q 038802 281 EEAMQYRILSVALDGYMKVFDYGKMKVTHSMR--------FPAPLMSVAFSPDCMTRVIGTSNGTIFAG 341 (532)
Q Consensus 281 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~~g~~dg~i~iw 341 (532)
.|..|+.+ -+.+++..+.+...... ....|.++....+|...+ |+..| +.++
T Consensus 244 ------~lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G-l~~~ 303 (758)
T 3ott_A 244 ------DLLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG-ISLS 303 (758)
T ss_dssp ------CEEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS-EEEE
T ss_pred ------CEEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc-cccc
Confidence 35555544 57888887755432221 123588888888776554 55556 4443
No 305
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.96 E-value=0.0022 Score=69.97 Aligned_cols=310 Identities=12% Similarity=0.112 Sum_probs=173.1
Q ss_pred CCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEE
Q 038802 72 SASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHL 151 (532)
Q Consensus 72 d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l 151 (532)
...|.|.|+.++..+..-. -..-+.-.+|..+.||.-. ..++.|||+++.+.+..+.-. .+|.-=.|- +.+.|
T Consensus 47 ~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~-e~VvfWkWi--s~~~l 119 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWI--SLNTV 119 (1630)
T ss_pred CceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccC-CCceEEEec--CCCee
Confidence 3478899988765442211 1122344688888887765 678999999988888777643 345555564 34445
Q ss_pred EEEeCCCeEEEEECCCC-eEEEeccCC----CCceEEEEEeCCCCCEEEEEe-------CCCeEEEEEcccCCceeEEEe
Q 038802 152 VSGGDDGIVKFWDVAGE-SVVLDLFGH----KDYVRCGDCSPVNGDMFVTGS-------YDHTVKLWDVRVENSKSVMEV 219 (532)
Q Consensus 152 ~s~s~dg~i~iwd~~~~-~~~~~~~~~----~~~v~~i~~~~~~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~ 219 (532)
+..+ +..|+-|++... .+...+.-| ...|..-..++ +.++++..| -.|.+.+|...... ....-
T Consensus 120 ~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er~~--sQ~ie 195 (1630)
T 1xi4_A 120 ALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIE 195 (1630)
T ss_pred EEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCC-CCCeEEEEeeccCCCcccceeeeeeccccc--chhhh
Confidence 4444 467999999743 344344333 34555566666 666655332 35788999887532 22222
Q ss_pred cCCCcEEEEEEec---CCCEEEEEc----CCeEEEEEccCC--CeeeE------EccC---CCcceEEEEEeccCCCCCc
Q 038802 220 NHGKPIEDVMFLP---SGGLIATAG----GNSVKIWDLIGG--GKMVY------SMES---HNKTVTSVCVGRVGNESGE 281 (532)
Q Consensus 220 ~~~~~v~~i~~~~---~~~~l~~~~----d~~i~iwd~~~~--~~~~~------~~~~---~~~~i~~~~~~~~~~~~~~ 281 (532)
+|......+.... ...+++.+. ++.+.|.++... +.+.. .+.. ...--.++..++.
T Consensus 196 gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k------ 269 (1630)
T 1xi4_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK------ 269 (1630)
T ss_pred HhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccc------
Confidence 4444333333321 112333222 368888888542 11110 0000 1112234445544
Q ss_pred cccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCccccccccccccccC
Q 038802 282 EAMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENVESGIENFWSLG 360 (532)
Q Consensus 282 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~ 360 (532)
...++..+.-|.+.+||+.++.++..-+ ...+|...+-.....-+++....|.|.--.++...........
T Consensus 270 ---~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~yi~~~----- 341 (1630)
T 1xi4_A 270 ---HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNV----- 341 (1630)
T ss_pred ---cCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccchhhhhHhhc-----
Confidence 5678888889999999999999887665 3345554444444334455557777777766655443211110
Q ss_pred cccccccccCCccceeeecCCCCCCCCCcEEEeCcccccchhHHHhhcccchHHHHHHhhCC
Q 038802 361 RVETQKPMLRPTYFRYFQRGQSDKPSEGDYLVVRPKKLKLGEHDKLLKKFRHKEALVSVLNG 422 (532)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~al~~al~~ 422 (532)
......-..+..+...+..+ ..-.+++++++.+++|.+|-..|...
T Consensus 342 --------l~~~~la~~~a~r~~lpGad--------~l~~~~F~~l~~~g~y~~AA~~aa~s 387 (1630)
T 1xi4_A 342 --------LQNPDLALRMAVRNNLAGAE--------ELFARKFNALFAQGNYSEAAKVAANA 387 (1630)
T ss_pred --------cCCHHHHHHHHHhcCCCCch--------hHHHHHHHHHHHcCCHHHHHHHHHhC
Confidence 00000001111111222222 23366799999999999999999865
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.89 E-value=0.0038 Score=57.83 Aligned_cols=214 Identities=14% Similarity=0.150 Sum_probs=109.5
Q ss_pred CeEEEEeCCCceEEEEe--eccCceeEEEEEccCCCEEEEEcCC-----CCEEEEECCCCc---eEEE--ecCCCCCEEE
Q 038802 73 ASLTLFSSQTLEKHSAI--SSFKDVVTCSSFRPDGSLLAASDLS-----GLIQVFDVKSRT---PLRR--LKSHTRPVRF 140 (532)
Q Consensus 73 ~~v~i~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~---~~~~--~~~h~~~i~~ 140 (532)
..+.+||..+.+-...- ........++ ..++.+++.|+.+ ..+.+||..+.+ -... +........+
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASV--SLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEE--EECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 47888998776533221 1111111222 2367777777754 468999988765 3222 1111111222
Q ss_pred EEeecCCCcEEEEEeCC-----CeEEEEECCCCeEEE--eccCCCCceEEEEEeCCCCCEEEEEeCC-----CeEEEEEc
Q 038802 141 VKYPFLDKLHLVSGGDD-----GIVKFWDVAGESVVL--DLFGHKDYVRCGDCSPVNGDMFVTGSYD-----HTVKLWDV 208 (532)
Q Consensus 141 ~~~~~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~--~~~~~~~~v~~i~~~~~~~~~l~s~s~d-----g~i~iwd~ 208 (532)
+.+ ++..++.|+.+ ..+.+||+.+.+-.. .+....... +++.. ++.+++.|+.+ ..+.+||+
T Consensus 109 ~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~ 182 (301)
T 2vpj_A 109 TTL---GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGA-GLVVA--SGVIYCLGGYDGLNILNSVEKYDP 182 (301)
T ss_dssp EEE---TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSC-EEEEE--TTEEEEECCBCSSCBCCCEEEEET
T ss_pred EEE---CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccc-eEEEE--CCEEEEECCCCCCcccceEEEEeC
Confidence 222 66777777654 368899988765332 222111111 22222 56777887765 35888998
Q ss_pred ccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C-----CeEEEEEccCCC-eeeEEccCCCcceEEEEEeccCCCCCc
Q 038802 209 RVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G-----NSVKIWDLIGGG-KMVYSMESHNKTVTSVCVGRVGNESGE 281 (532)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d-----~~i~iwd~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~ 281 (532)
.+..-...........-.++... ++.+++.|+ + ..+.+||+.+.. ..+..+.........+.+ +
T Consensus 183 ~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~------ 253 (301)
T 2vpj_A 183 HTGHWTNVTPMATKRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--R------ 253 (301)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T------
T ss_pred CCCcEEeCCCCCcccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--C------
Confidence 77543332222222222222222 567777766 3 368999987652 111111111111122222 2
Q ss_pred cccccEEEEEecC-----CeEEEEECCCce
Q 038802 282 EAMQYRILSVALD-----GYMKVFDYGKMK 306 (532)
Q Consensus 282 ~~~~~~l~s~~~d-----g~i~iwd~~~~~ 306 (532)
+.+++.|+.+ ..+.+||+.+.+
T Consensus 254 ---~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 254 ---GRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp ---TEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred ---CEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 4567777665 457888887644
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.83 E-value=0.0041 Score=57.58 Aligned_cols=223 Identities=15% Similarity=0.164 Sum_probs=114.1
Q ss_pred CCCEEEEEc-CC-----CCEEEEECCCCceEEE--ecCCCCCEEEEEeecCCCcEEEEEeCC-----CeEEEEECCCCe-
Q 038802 104 DGSLLAASD-LS-----GLIQVFDVKSRTPLRR--LKSHTRPVRFVKYPFLDKLHLVSGGDD-----GIVKFWDVAGES- 169 (532)
Q Consensus 104 ~~~~l~~g~-~d-----g~i~iwd~~~~~~~~~--~~~h~~~i~~~~~~~~~~~~l~s~s~d-----g~i~iwd~~~~~- 169 (532)
++.+++.|+ .+ ..+.+||..+.+-... +.........+.+ ++..++.|+.+ ..+.+||..+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL---HDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE---CCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 445566665 22 3688899877653321 1111111122222 66777777755 468899987765
Q ss_pred --E--EEeccCCCCceEEEEEeCCCCCEEEEEeCCC-----eEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEE
Q 038802 170 --V--VLDLFGHKDYVRCGDCSPVNGDMFVTGSYDH-----TVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATA 240 (532)
Q Consensus 170 --~--~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~ 240 (532)
- +..+....... +++.. ++.+++.|+.++ .+.+||+.+.+-...........-.+++.. ++.+++.|
T Consensus 91 ~~W~~~~~~p~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~G 166 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLA-GATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA-SGVIYCLG 166 (301)
T ss_dssp CCCEEECCCSSCCBSC-EEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE-TTEEEEEC
T ss_pred CeeEECCCCCCCccce-eEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE-CCEEEEEC
Confidence 2 22221111111 22222 567777777543 588899877544433332222222223332 66777776
Q ss_pred c-C-----CeEEEEEccCCCeeeE--EccCCCcceEEEEEeccCCCCCccccccEEEEEecC-----CeEEEEECCCceE
Q 038802 241 G-G-----NSVKIWDLIGGGKMVY--SMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALD-----GYMKVFDYGKMKV 307 (532)
Q Consensus 241 ~-d-----~~i~iwd~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~ 307 (532)
+ + ..+.+||+.+. .-.. .+.........+.+ + +.+++.|+.+ ..+.+||+.+.+-
T Consensus 167 G~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~---------~~i~v~GG~~~~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTG-HWTNVTPMATKRSGAGVALL--N---------DHIYVVGGFDGTAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp CBCSSCBCCCEEEEETTTT-EEEEECCCSSCCBSCEEEEE--T---------TEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCCCCcccceEEEEeCCCC-cEEeCCCCCcccccceEEEE--C---------CEEEEEeCCCCCcccceEEEEeCCCCcE
Confidence 5 3 36889998765 2211 11111111122222 2 4567777764 4689999987654
Q ss_pred EEeeecC--CCeeEEEEecCCCEEEEEecCC-----cEEEEeecCc
Q 038802 308 THSMRFP--APLMSVAFSPDCMTRVIGTSNG-----TIFAGRRKKK 346 (532)
Q Consensus 308 ~~~~~~~--~~v~~~~~s~~~~~l~~g~~dg-----~i~iw~~~~~ 346 (532)
...-..+ ..-.+++ .-+++.++.|+.++ .+.+||..+.
T Consensus 235 ~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 235 TTVTSMTTPRCYVGAT-VLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred EECCCCCCcccceeEE-EECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 4332222 1112222 23667777777653 4566666543
No 308
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.81 E-value=6.1e-05 Score=78.72 Aligned_cols=220 Identities=9% Similarity=0.023 Sum_probs=123.6
Q ss_pred cCeeEEEEcCCCCeEEEEE-eCCeEEEEeCCC----ceEEEEeeccCceeEEEEEccC-CCEEEEEcCCCCEEEEECCCC
Q 038802 52 SSINSIVFSPTTSHLFAAT-HSASLTLFSSQT----LEKHSAISSFKDVVTCSSFRPD-GSLLAASDLSGLIQVFDVKSR 125 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~-~d~~v~i~~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~~ 125 (532)
..+..++|++.+..|+.+. ..+.|+.+++.. ......+...-.....+++.+. ++++++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 3566889998776666554 357888888765 1222222111223456788754 444455456788999998755
Q ss_pred ceEEEecCCCCCEEEEEeecCCCcEEEEEeCC-CeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEE
Q 038802 126 TPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDD-GIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVK 204 (532)
Q Consensus 126 ~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~d-g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~ 204 (532)
.....+.........++++|..+.++++-... +.|.++++........+...-...+.|+++|..+.++++-+..+.|.
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 44333333334457788988444444443333 67888887643322222222234567999984566666666778899
Q ss_pred EEEcccCCceeEEEe-cCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEe
Q 038802 205 LWDVRVENSKSVMEV-NHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVG 273 (532)
Q Consensus 205 iwd~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~ 273 (532)
.+|+.......+... ........+++..+ .++++.. .+.|..+|..++ ..+..+.......+.+.+.
T Consensus 566 ~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G-~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 566 SIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTG-SDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp EECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTE-EEEECCCTTCSSCCCCCBC
T ss_pred EEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCC-CceEEeecCCCCCcEEEEe
Confidence 999875332222221 11122345566543 4444444 678999997665 5555554333333444443
No 309
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.80 E-value=0.0019 Score=59.53 Aligned_cols=159 Identities=12% Similarity=0.093 Sum_probs=105.3
Q ss_pred CCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecC-------CCcEEEEEE---ecCCCEEEEEc-----
Q 038802 177 HKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNH-------GKPIEDVMF---LPSGGLIATAG----- 241 (532)
Q Consensus 177 ~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-------~~~v~~i~~---~~~~~~l~~~~----- 241 (532)
....-.++.|++.++.++++.-..++|..||...+..... .... ...+..+.| .|+++++++..
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 3344457889884444444444799999999875433333 3332 114678999 68888877533
Q ss_pred ---------CCeEEEEEcc---CCCeeeEEcc--C-----------CCcceEEEEEeccCCCCCccccccEEEEEecC-C
Q 038802 242 ---------GNSVKIWDLI---GGGKMVYSME--S-----------HNKTVTSVCVGRVGNESGEEAMQYRILSVALD-G 295 (532)
Q Consensus 242 ---------d~~i~iwd~~---~~~~~~~~~~--~-----------~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~d-g 295 (532)
+..+..||+. ++ +.+.... . -......++..++ ++..++++.. +
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg-~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~---------GnaYVt~s~~~~ 159 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENS-KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD---------GNSYVAFALGMP 159 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTC-CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT---------SCEEEEEEESSC
T ss_pred cccccccCCCCEEEEEcCCcCCCC-CEEEEecCccccccccccccccccCCceeEECCC---------CCEEEeCCCCCC
Confidence 4679999998 55 3333222 1 1134788999988 5677778888 8
Q ss_pred eEEEEECCCceEEEee-ec-----CCCeeEEEEecCCCEEEEEecCCcEEEEeecCc
Q 038802 296 YMKVFDYGKMKVTHSM-RF-----PAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 296 ~i~iwd~~~~~~~~~~-~~-----~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~ 346 (532)
.|...+.........+ .. ....+.++++|+|..|++...+|.|..+|+.+.
T Consensus 160 ~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 160 AIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 8887776654332211 11 123679999999999998888999999998743
No 310
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.78 E-value=0.021 Score=52.10 Aligned_cols=257 Identities=12% Similarity=0.132 Sum_probs=158.8
Q ss_pred CeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEE
Q 038802 73 ASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLV 152 (532)
Q Consensus 73 ~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~ 152 (532)
..|.|.|+.++.....-.-. .-+.-.+|..+.||.-. ..++.|+|+++.+.++.+.-. ..|.-=.|- +.+.|+
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~---AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWi--s~~~L~ 121 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWI--SLNTVA 121 (365)
T ss_dssp EEEEEEETTSTTSCEEEECC---CSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEEC--SSSEEE
T ss_pred CEEEEEECCCCCCccccccc---cceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEec--CCCeEE
Confidence 37889999876544322111 12234588888888765 678999999999988888754 466666665 445555
Q ss_pred EEeCCCeEEEEECCC-CeEEEeccCC----CCceEEEEEeCCCCCEEEEEeC-------CCeEEEEEcccCCceeEEEec
Q 038802 153 SGGDDGIVKFWDVAG-ESVVLDLFGH----KDYVRCGDCSPVNGDMFVTGSY-------DHTVKLWDVRVENSKSVMEVN 220 (532)
Q Consensus 153 s~s~dg~i~iwd~~~-~~~~~~~~~~----~~~v~~i~~~~~~~~~l~s~s~-------dg~i~iwd~~~~~~~~~~~~~ 220 (532)
-.+ +..|+-|++.. ..+...+..| ...|..-..++ +.++++..+- .|.+.+|..+. ......-+
T Consensus 122 lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieG 197 (365)
T 2xzh_A 122 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEG 197 (365)
T ss_dssp EEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTT--TEEEEECC
T ss_pred EEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECC-CCCEEEEEeEeccCCccceeEEEEeecc--cccceeee
Confidence 554 46799999974 3455545433 24455566666 6666554332 36788998865 33333335
Q ss_pred CCCcEEEEEEecC---CCEEEEEc----CCeEEEEEccCC--Ce------eeEEccC---CCcceEEEEEeccCCCCCcc
Q 038802 221 HGKPIEDVMFLPS---GGLIATAG----GNSVKIWDLIGG--GK------MVYSMES---HNKTVTSVCVGRVGNESGEE 282 (532)
Q Consensus 221 ~~~~v~~i~~~~~---~~~l~~~~----d~~i~iwd~~~~--~~------~~~~~~~---~~~~i~~~~~~~~~~~~~~~ 282 (532)
|......+.+..+ ..+++.+. ++.+.|.++... +. .+..+.. ...--.++..++.
T Consensus 198 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~k------- 270 (365)
T 2xzh_A 198 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK------- 270 (365)
T ss_dssp SEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETT-------
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEeccc-------
Confidence 5444433332211 12334333 258899988543 11 1111111 1223345666655
Q ss_pred ccccEEEEEecCCeEEEEECCCceEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 283 AMQYRILSVALDGYMKVFDYGKMKVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 283 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
...++..+.-|.+++||++++.++..-+ ...+|..-+-+....-+++....|.|.--.++.....
T Consensus 271 --ygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~iv 336 (365)
T 2xzh_A 271 --HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 336 (365)
T ss_dssp --TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHH
T ss_pred --CCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccEe
Confidence 5678888999999999999999998877 4456666666555555666678888888777765543
No 311
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.73 E-value=0.0056 Score=56.66 Aligned_cols=215 Identities=16% Similarity=0.196 Sum_probs=108.2
Q ss_pred CeEEEEeCCCceEEEE--eeccCceeEEEEEccCCCEEEEEcCC-----CCEEEEECCCCceEEEe--cCCCCCEEEEEe
Q 038802 73 ASLTLFSSQTLEKHSA--ISSFKDVVTCSSFRPDGSLLAASDLS-----GLIQVFDVKSRTPLRRL--KSHTRPVRFVKY 143 (532)
Q Consensus 73 ~~v~i~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~~~~~--~~h~~~i~~~~~ 143 (532)
..+..||..+.+-... +......-..+. -++.+++.|+.+ ..+.+||..+.+-...- ........++.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVY--MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEE--ECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE
Confidence 3578888877653322 111111111222 267777777754 35889998876533321 111111222222
Q ss_pred ecCCCcEEEEEeCCC-----eEEEEECCCCeEEEe--ccCCCCceEEEEEeCCCCCEEEEEeCC-------CeEEEEEcc
Q 038802 144 PFLDKLHLVSGGDDG-----IVKFWDVAGESVVLD--LFGHKDYVRCGDCSPVNGDMFVTGSYD-------HTVKLWDVR 209 (532)
Q Consensus 144 ~~~~~~~l~s~s~dg-----~i~iwd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~~l~s~s~d-------g~i~iwd~~ 209 (532)
++..++.|+.++ .+.+||+.+.+-... +...... .+++.. ++.+++.|+.+ ..+.+||+.
T Consensus 108 ---~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~ 181 (302)
T 2xn4_A 108 ---NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSS-VGVGVV--GGLLYAVGGYDVASRQCLSTVECYNAT 181 (302)
T ss_dssp ---TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBS-CEEEEE--TTEEEEECCEETTTTEECCCEEEEETT
T ss_pred ---CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccC-ceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCC
Confidence 667777777653 578899887653322 1111111 122222 56777777653 348889987
Q ss_pred cCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C-----CeEEEEEccCCC-eeeEEccCCCcceEEEEEeccCCCCCcc
Q 038802 210 VENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G-----NSVKIWDLIGGG-KMVYSMESHNKTVTSVCVGRVGNESGEE 282 (532)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d-----~~i~iwd~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 282 (532)
+..-...........-.+++.. ++.+++.|+ + +.+.+||+.+.. ..+..+....... +++.. +
T Consensus 182 ~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~-~------- 251 (302)
T 2xn4_A 182 TNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNA-GVCAV-N------- 251 (302)
T ss_dssp TTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE-T-------
T ss_pred CCcEEECCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccC-eEEEE-C-------
Confidence 6433332222222222233332 567777766 3 368899987651 1111111111111 22222 2
Q ss_pred ccccEEEEEecCC-----eEEEEECCCceE
Q 038802 283 AMQYRILSVALDG-----YMKVFDYGKMKV 307 (532)
Q Consensus 283 ~~~~~l~s~~~dg-----~i~iwd~~~~~~ 307 (532)
+.+++.|+.++ .+.+||+.+.+-
T Consensus 252 --~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 252 --GLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp --TEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred --CEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 45677777653 488888877653
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.72 E-value=0.0087 Score=55.36 Aligned_cols=223 Identities=15% Similarity=0.179 Sum_probs=111.7
Q ss_pred CCEEEEEcCC----CCEEEEECCCCceEEE--ecCCCCCEEEEEeecCCCcEEEEEeCC-----CeEEEEECCCCeEEEe
Q 038802 105 GSLLAASDLS----GLIQVFDVKSRTPLRR--LKSHTRPVRFVKYPFLDKLHLVSGGDD-----GIVKFWDVAGESVVLD 173 (532)
Q Consensus 105 ~~~l~~g~~d----g~i~iwd~~~~~~~~~--~~~h~~~i~~~~~~~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~ 173 (532)
+.+++.|+.+ ..+.+||..+.+-... +......-..+.+ ++.+++.|+.+ ..+.+||..+.+-...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM---AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE---CCEEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 3455555533 3578888877653322 1111111122222 66777777754 3588999887653322
Q ss_pred --ccCCCCceEEEEEeCCCCCEEEEEeCCC-----eEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C---
Q 038802 174 --LFGHKDYVRCGDCSPVNGDMFVTGSYDH-----TVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G--- 242 (532)
Q Consensus 174 --~~~~~~~v~~i~~~~~~~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d--- 242 (532)
+....... +++.. ++.+++.|+.++ .+.+||+.+.+-...........-.+++.. ++.+++.|+ +
T Consensus 93 ~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~ 168 (302)
T 2xn4_A 93 ANMRDRRSTL-GAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV-GGLLYAVGGYDVAS 168 (302)
T ss_dssp CCCSSCCBSC-EEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTT
T ss_pred CCCCccccce-EEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE-CCEEEEEeCCCCCC
Confidence 11111111 22222 567777787654 477888876443332222222222223332 566666665 2
Q ss_pred ----CeEEEEEccCCC-eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecC-----CeEEEEECCCceEEEeee
Q 038802 243 ----NSVKIWDLIGGG-KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALD-----GYMKVFDYGKMKVTHSMR 312 (532)
Q Consensus 243 ----~~i~iwd~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~ 312 (532)
..+.+||+.+.. ..+..+....... +++.. + +.+++.|+.+ ..+.+||+.+.+-...-.
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~---------~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 237 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRRSGA-GVGVL-N---------NLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVAD 237 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE-T---------TEEEEECCBSSSSBCCCEEEEETTTTEEEEECC
T ss_pred CccccEEEEEeCCCCcEEECCCCccccccc-cEEEE-C---------CEEEEECCCCCCcccceEEEEeCCCCCEeeCCC
Confidence 248889987651 1111111111111 22222 2 4667777764 368999998765433322
Q ss_pred cCC--CeeEEEEecCCCEEEEEecCC-----cEEEEeecCc
Q 038802 313 FPA--PLMSVAFSPDCMTRVIGTSNG-----TIFAGRRKKK 346 (532)
Q Consensus 313 ~~~--~v~~~~~s~~~~~l~~g~~dg-----~i~iw~~~~~ 346 (532)
.+. .-.+++ ..+++.++.|+.++ .+.+||..+.
T Consensus 238 ~~~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 238 MNMCRRNAGVC-AVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp CSSCCBSCEEE-EETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCccccCeEE-EECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 211 111222 23667777877654 3677776554
No 313
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.67 E-value=0.086 Score=55.77 Aligned_cols=273 Identities=11% Similarity=0.069 Sum_probs=156.7
Q ss_pred CeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEec
Q 038802 53 SINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLK 132 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 132 (532)
.|.++...+++..|..|+. +-+..+|..+++...........|.++...++|.+.+ |+.+| +.+++..++.......
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~G-l~~~~~~~~~~~~~~~ 268 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDNG-LYVYHNDTTPLQHIIH 268 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETTE-EEEECCTTSCCEEECC
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCCc-eeEEecCCCcEEEEEc
Confidence 4888888877776667775 4688899877654332222245688888877776544 44444 7888877654332211
Q ss_pred -------CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEecc-----CCCCceEEEEEeCCCCCEEEEEeCC
Q 038802 133 -------SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLF-----GHKDYVRCGDCSPVNGDMFVTGSYD 200 (532)
Q Consensus 133 -------~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-----~~~~~v~~i~~~~~~~~~l~s~s~d 200 (532)
-....|.++.... ++ .|-.|+..| +.++.....-...... .....|.++.... ++.+.+ |+.+
T Consensus 269 ~~~~~~~l~~~~i~~i~~D~-~g-~lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~-~g~lWi-Gt~~ 343 (758)
T 3ott_A 269 DSRNIQSLTNNIIWNIFADQ-EH-NIWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDS-KGFYWF-GGAN 343 (758)
T ss_dssp CTTCTTSCSCSCEEEEEECT-TC-CEEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECT-TCCEEE-EETT
T ss_pred CCCCcCcCCcCeEEEEEEcC-CC-CEEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcC-CCCEEE-eeCC
Confidence 1234588887764 44 466677666 5544332211111111 1234688887765 565544 4555
Q ss_pred CeEEEEEcccCCcee--EEEe------cCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEE-c-cC----CCcc
Q 038802 201 HTVKLWDVRVENSKS--VMEV------NHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYS-M-ES----HNKT 266 (532)
Q Consensus 201 g~i~iwd~~~~~~~~--~~~~------~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~-~-~~----~~~~ 266 (532)
| +..++..++.... .... -....|.++.-.++|.+.++. ++.+..||..++ ..... . .. ....
T Consensus 344 G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt-~~GL~~~~~~~~-~~~~~~~~~~~~~~~~~~ 420 (758)
T 3ott_A 344 G-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT-DGSINRYDYATR-QFIHYNIVDNTGTYNTNW 420 (758)
T ss_dssp E-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE-TTEEEEEETTTT-EEEEEEEECCC--CBSSS
T ss_pred c-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe-CCcHhhcCcCCC-cEEEeecCCCcCCCCCce
Confidence 5 6666655422111 1110 012458888888888766654 568999998765 32211 1 11 1235
Q ss_pred eEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC------ceEE--Eeee-----cCCCeeEEEEecCCCEEEEEe
Q 038802 267 VTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK------MKVT--HSMR-----FPAPLMSVAFSPDCMTRVIGT 333 (532)
Q Consensus 267 i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~------~~~~--~~~~-----~~~~v~~~~~s~~~~~l~~g~ 333 (532)
|.++...++ ..|..|+..+-|.++|..+ .... ..+. ....|.++...++|...+.++
T Consensus 421 v~~i~~d~~----------g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~ 490 (758)
T 3ott_A 421 TYYIFEDTA----------GQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLY 490 (758)
T ss_dssp EEEEEECTT----------SEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEET
T ss_pred EEEEEEcCC----------CCEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEcc
Confidence 777776554 3567777766788888553 1111 1111 123588899899998776444
Q ss_pred cCCcEEEEeecCc
Q 038802 334 SNGTIFAGRRKKK 346 (532)
Q Consensus 334 ~dg~i~iw~~~~~ 346 (532)
..+-|..++..+.
T Consensus 491 t~~Gl~~~d~~~~ 503 (758)
T 3ott_A 491 NNKGIDKINPRTR 503 (758)
T ss_dssp TCSSEEEEETTTT
T ss_pred CCCCcEEEeCCCC
Confidence 4455777776654
No 314
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.64 E-value=0.033 Score=52.75 Aligned_cols=216 Identities=14% Similarity=0.119 Sum_probs=120.4
Q ss_pred cCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCce-EEEEee---ccCceeEEEEEccC---CCEEEEEcC----C----CC
Q 038802 52 SSINSIVFSPTTSHLFAATHSASLTLFSSQTLE-KHSAIS---SFKDVVTCSSFRPD---GSLLAASDL----S----GL 116 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~g~~----d----g~ 116 (532)
.....++|.|+|+ ++++..+|.|++++ .+++ .+..+. ........++|+|+ +..|+++.. + +.
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4567999999997 66667779999997 3454 222211 12356889999997 555555432 2 56
Q ss_pred EEEEECCCC-------ceE-EEec---CCCCCEEEEEeecCCCcEEEEEeC-------------CCeEEEEECCCC----
Q 038802 117 IQVFDVKSR-------TPL-RRLK---SHTRPVRFVKYPFLDKLHLVSGGD-------------DGIVKFWDVAGE---- 168 (532)
Q Consensus 117 i~iwd~~~~-------~~~-~~~~---~h~~~i~~~~~~~~~~~~l~s~s~-------------dg~i~iwd~~~~---- 168 (532)
|..|+.... +.+ ..+. .|. ...++|.| ++.++++.+. .|.|..++....
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~--~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHN--GGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCC--CCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcC--CceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 777776543 111 1122 232 35789999 7876666432 246666665432
Q ss_pred -----eEEEeccCCCCceEEEEEeCCCCCEEEEEeCCC---eEEEEEcccCC----------------ceeEEEe-cCCC
Q 038802 169 -----SVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDH---TVKLWDVRVEN----------------SKSVMEV-NHGK 223 (532)
Q Consensus 169 -----~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg---~i~iwd~~~~~----------------~~~~~~~-~~~~ 223 (532)
..+. ..++.. ...++|+|.++.++++-.... .|.+.. .+. ....... ....
T Consensus 184 npf~~~~i~-a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ 259 (354)
T 3a9g_A 184 NPFPNSPIW-SYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETW 259 (354)
T ss_dssp SSSTTCCEE-EECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCC
T ss_pred CCCCCCcEE-EEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCc
Confidence 0111 123433 347889984455555433222 133322 111 0122222 2234
Q ss_pred cEEEEEEe-------cCCCEEEEEc-CCeEEEEEccCCCeee--EE-ccCCCcceEEEEEeccC
Q 038802 224 PIEDVMFL-------PSGGLIATAG-GNSVKIWDLIGGGKMV--YS-MESHNKTVTSVCVGRVG 276 (532)
Q Consensus 224 ~v~~i~~~-------~~~~~l~~~~-d~~i~iwd~~~~~~~~--~~-~~~~~~~i~~~~~~~~~ 276 (532)
....++|. .+|.++++.- .+.|...++...+... .. +.+....+..+++.|+|
T Consensus 260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG 323 (354)
T 3a9g_A 260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDG 323 (354)
T ss_dssp CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTS
T ss_pred CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCC
Confidence 56788884 4677776665 6788888887532221 22 22224567888888884
No 315
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.64 E-value=0.045 Score=51.81 Aligned_cols=240 Identities=14% Similarity=0.081 Sum_probs=129.1
Q ss_pred ceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEE---e----cCCCCCEEEEEeecC---CCcEEEEEeC-------
Q 038802 94 DVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRR---L----KSHTRPVRFVKYPFL---DKLHLVSGGD------- 156 (532)
Q Consensus 94 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~---~----~~h~~~i~~~~~~~~---~~~~l~s~s~------- 156 (532)
.....++|.|+|+.|+++...|.|++++.. +..... + .........++|+|+ ++.+.++-+.
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 456889999999834444557999999853 322111 1 112346789999983 3444444332
Q ss_pred CCeEEEEECCCC-------eEEE-ecc---CCCCceEEEEEeCCCCCEEEEEeC-------------CCeEEEEEcccCC
Q 038802 157 DGIVKFWDVAGE-------SVVL-DLF---GHKDYVRCGDCSPVNGDMFVTGSY-------------DHTVKLWDVRVEN 212 (532)
Q Consensus 157 dg~i~iwd~~~~-------~~~~-~~~---~~~~~v~~i~~~~~~~~~l~s~s~-------------dg~i~iwd~~~~~ 212 (532)
...|..|++... +.+. .+. .....-..+.|.| ++.+.++.+. .|.|.-+|....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 235767766532 1111 111 1111235799999 8866555433 2456666654320
Q ss_pred ------------ceeEEEecCCCcEEEEEEec-CCCEEEEEcC--C--eEEEEEccCCC---------------------
Q 038802 213 ------------SKSVMEVNHGKPIEDVMFLP-SGGLIATAGG--N--SVKIWDLIGGG--------------------- 254 (532)
Q Consensus 213 ------------~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~d--~--~i~iwd~~~~~--------------------- 254 (532)
...++..++ .....++|+| +|.+.++-.+ + .|.+. ..+.
T Consensus 176 p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i--~~G~nyGwp~~~~~~~~~~~~~~~~ 252 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIP--QKGKNYGWPLATWGINYSGFKIPEA 252 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECC--CTTCBCCTTTBCSSBCTTSSCCTTC
T ss_pred CCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEe--ccCCcCCCCCccCCCCCCCCccCcc
Confidence 123333343 3567899999 6665554432 1 23221 1110
Q ss_pred ---------eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEEEeee----cCCCeeEEE
Q 038802 255 ---------KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMR----FPAPLMSVA 321 (532)
Q Consensus 255 ---------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~ 321 (532)
.++..+.. ......+.|....... ...+.++++.-..+.|...++..++...... ....+..++
T Consensus 253 ~~~~~~~~~~P~~~~~~-~~ap~G~~~y~g~~fp--~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~ 329 (353)
T 2g8s_A 253 KGEIVAGTEQPVFYWKD-SPAVSGMAFYNSDKFP--QWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVR 329 (353)
T ss_dssp CBSSCTTSCCCSEEESS-CCCEEEEEEECCSSSG--GGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEE
T ss_pred cCCCCCCccCCeEEeCC-CcCcceeEEECCccCc--ccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEE
Confidence 11122222 2345677776432111 1225666666677888888887665443322 235789999
Q ss_pred EecCCCEEEEEe-cCCcEEEEee
Q 038802 322 FSPDCMTRVIGT-SNGTIFAGRR 343 (532)
Q Consensus 322 ~s~~~~~l~~g~-~dg~i~iw~~ 343 (532)
+.|||.+.++.. .+|. ||.+
T Consensus 330 ~~pdG~lyv~td~~~g~--I~ri 350 (353)
T 2g8s_A 330 TGPDGYLYVLTDESSGE--LLKV 350 (353)
T ss_dssp ECTTSCEEEEECSTTEE--EEEE
T ss_pred ECCCCcEEEEEeCCCCE--EEEE
Confidence 999998666543 3453 4444
No 316
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.63 E-value=0.02 Score=53.06 Aligned_cols=223 Identities=13% Similarity=0.123 Sum_probs=113.7
Q ss_pred CCEEEEEcC--CCCEEEEECCCCceEEE--ecCCCCCEEEEEeecCCCcEEEEEeCC----CeEEEEECCCCeEEEe--c
Q 038802 105 GSLLAASDL--SGLIQVFDVKSRTPLRR--LKSHTRPVRFVKYPFLDKLHLVSGGDD----GIVKFWDVAGESVVLD--L 174 (532)
Q Consensus 105 ~~~l~~g~~--dg~i~iwd~~~~~~~~~--~~~h~~~i~~~~~~~~~~~~l~s~s~d----g~i~iwd~~~~~~~~~--~ 174 (532)
+.+++.|+. ...+.+||..+++-... +......-..+.+ ++.+++.|+.+ ..+.+||..+.+-... +
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW---DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE---TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE---CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC
Confidence 335556654 35789999887653322 1111112222222 66777777755 6788999987753322 2
Q ss_pred cCCCCceEEEEEeCCCCCEEEEEeCC------CeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C-----
Q 038802 175 FGHKDYVRCGDCSPVNGDMFVTGSYD------HTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G----- 242 (532)
Q Consensus 175 ~~~~~~v~~i~~~~~~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d----- 242 (532)
....... +++.. ++.+++.|+.+ ..+.+||..+..-...-.......-.+++. -++.+++.|+ +
T Consensus 89 p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 164 (306)
T 3ii7_A 89 PTPRDSL-AACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVS 164 (306)
T ss_dssp SSCCBSC-EEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTT
T ss_pred Cccccce-eEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCc
Confidence 2111111 22222 56777888765 458899987754332222222222222222 2667666665 2
Q ss_pred ----CeEEEEEccCCC-eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecC-----CeEEEEECCCceEEEeee
Q 038802 243 ----NSVKIWDLIGGG-KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALD-----GYMKVFDYGKMKVTHSMR 312 (532)
Q Consensus 243 ----~~i~iwd~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~ 312 (532)
..+.+||+.+.. ..+..+..... -.+++.. + +.+++.|+.+ ..+.+||+.+.+-...-.
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~-~---------~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 233 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARK-NHGLVFV-K---------DKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSP 233 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCB-SCEEEEE-T---------TEEEEECCEETTEEBCCEEEEETTTTEEEECCC
T ss_pred ccccceEEEeCCCCCeEEECCCccchhh-cceEEEE-C---------CEEEEEeCCCCCCCCceEEEeeCCCCcEEECCC
Confidence 348889987652 11111111111 1122222 2 4566776654 458899998765433222
Q ss_pred cC--CCeeEEEEecCCCEEEEEecC-----CcEEEEeecCc
Q 038802 313 FP--APLMSVAFSPDCMTRVIGTSN-----GTIFAGRRKKK 346 (532)
Q Consensus 313 ~~--~~v~~~~~s~~~~~l~~g~~d-----g~i~iw~~~~~ 346 (532)
.+ ..-.+++.. +++.++.|+.+ ..+.+||..+.
T Consensus 234 ~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 234 MPWKGVTVKCAAV-GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp CSCCBSCCEEEEE-TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCCCccceeEEEE-CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 21 111222222 67788888755 34666766554
No 317
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.62 E-value=0.017 Score=53.48 Aligned_cols=222 Identities=14% Similarity=0.159 Sum_probs=114.0
Q ss_pred eEEEEEe--CCeEEEEeCCCceEEEE--eeccCceeEEEEEccCCCEEEEEcCC----CCEEEEECCCCceEEE--ecCC
Q 038802 65 HLFAATH--SASLTLFSSQTLEKHSA--ISSFKDVVTCSSFRPDGSLLAASDLS----GLIQVFDVKSRTPLRR--LKSH 134 (532)
Q Consensus 65 ~l~~~~~--d~~v~i~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~g~~d----g~i~iwd~~~~~~~~~--~~~h 134 (532)
.++.|+. ...+.+||..+.+-... +........++. -++.+++.|+.+ ..+.+||..+.+-... +...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 3444443 35788999887653322 111111222222 367777777754 5688999887654332 2211
Q ss_pred CCCEEEEEeecCCCcEEEEEeCC------CeEEEEECCCCeEEEe--ccCCCCceEEEEEeCCCCCEEEEEeC-------
Q 038802 135 TRPVRFVKYPFLDKLHLVSGGDD------GIVKFWDVAGESVVLD--LFGHKDYVRCGDCSPVNGDMFVTGSY------- 199 (532)
Q Consensus 135 ~~~i~~~~~~~~~~~~l~s~s~d------g~i~iwd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~~l~s~s~------- 199 (532)
......+.+ ++.+++.|+.+ ..+.+||..+.+-... +....... +++.. ++.+++.|+.
T Consensus 92 r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~ 165 (306)
T 3ii7_A 92 RDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH-GMVEA--NGLIYVCGGSLGNNVSG 165 (306)
T ss_dssp CBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE--TTEEEEECCEESCTTTC
T ss_pred ccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee-EEEEE--CCEEEEECCCCCCCCcc
Confidence 111222222 66777777765 4588999987753322 11111111 22222 5677777764
Q ss_pred --CCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C-----CeEEEEEccCCC-eeeEEccCCCcceEEE
Q 038802 200 --DHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G-----NSVKIWDLIGGG-KMVYSMESHNKTVTSV 270 (532)
Q Consensus 200 --dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d-----~~i~iwd~~~~~-~~~~~~~~~~~~i~~~ 270 (532)
-..+.+||+.+..-...........-.++... ++++++.|+ + ..+.+||+.+.. ..+..+.........+
T Consensus 166 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 244 (306)
T 3ii7_A 166 RVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCA 244 (306)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEE
T ss_pred cccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEE
Confidence 24488999877533322222222222233333 666777766 3 368899987651 1111111111122222
Q ss_pred EEeccCCCCCccccccEEEEEecC-----CeEEEEECCCce
Q 038802 271 CVGRVGNESGEEAMQYRILSVALD-----GYMKVFDYGKMK 306 (532)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~ 306 (532)
.+ + +.+++.|+.+ ..+.+||+.+.+
T Consensus 245 ~~--~---------~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 245 AV--G---------SIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EE--T---------TEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EE--C---------CEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 22 2 4677777754 468889987744
No 318
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.56 E-value=0.064 Score=52.68 Aligned_cols=255 Identities=12% Similarity=0.102 Sum_probs=148.6
Q ss_pred EEEEEeCCeEEEEeCCCceEEEEeeccC-------------------------cee--EEEEEc---cCCCEEEEEcC-C
Q 038802 66 LFAATHSASLTLFSSQTLEKHSAISSFK-------------------------DVV--TCSSFR---PDGSLLAASDL-S 114 (532)
Q Consensus 66 l~~~~~d~~v~i~~~~~~~~~~~~~~~~-------------------------~~v--~~~~~~---~~~~~l~~g~~-d 114 (532)
+.+|+.+|.|+|+-+.+++.+..+..++ +.. ..+++. .||++|+.-.. +
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 5567778999999999998888764321 111 123332 26788887764 5
Q ss_pred CCEEEEECCCCceEEEec-CCCCCEEEEEee--cCCCcEEEEEeC-------CCeE------------EEEECCCCeEEE
Q 038802 115 GLIQVFDVKSRTPLRRLK-SHTRPVRFVKYP--FLDKLHLVSGGD-------DGIV------------KFWDVAGESVVL 172 (532)
Q Consensus 115 g~i~iwd~~~~~~~~~~~-~h~~~i~~~~~~--~~~~~~l~s~s~-------dg~i------------~iwd~~~~~~~~ 172 (532)
..|...+++..++-..+. .....+..+.|- | +..+++.++. ||.. ...|..+.+...
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p-~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~ 231 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVP-HTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF 231 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSS-BCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccC-CccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence 678888888877666554 345678888886 5 7778887764 2321 111222222211
Q ss_pred eccCCCCceEEEEEeCCCCCEEEEEeCCC---------------eEEEEE-------------------------cccC-
Q 038802 173 DLFGHKDYVRCGDCSPVNGDMFVTGSYDH---------------TVKLWD-------------------------VRVE- 211 (532)
Q Consensus 173 ~~~~~~~~v~~i~~~~~~~~~l~s~s~dg---------------~i~iwd-------------------------~~~~- 211 (532)
.+.- .+....+...+ ++.+.++.+++. .+.++| .+..
T Consensus 232 Qv~v-~gnld~~~~~~-~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~ 309 (638)
T 3sbq_A 232 QVIV-DGNLDNTDADY-TGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKD 309 (638)
T ss_dssp EEEE-SSCCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBT
T ss_pred EEEc-CCChhhcCCCC-CCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccc
Confidence 1110 11111233344 555655554431 244444 3320
Q ss_pred --CceeEEEecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCC-----e-------eeEEccCCCcceEEEEEecc
Q 038802 212 --NSKSVMEVNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGG-----K-------MVYSMESHNKTVTSVCVGRV 275 (532)
Q Consensus 212 --~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~-----~-------~~~~~~~~~~~i~~~~~~~~ 275 (532)
....+..+.-......+.++|||+++++++ +.++.++|+.... + .....+. .-.-...+|.++
T Consensus 310 ~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~ 388 (638)
T 3sbq_A 310 GKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGR 388 (638)
T ss_dssp TBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSS
T ss_pred ccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCC
Confidence 011222223344556788999999999998 7899999987410 1 1223332 334567788887
Q ss_pred CCCCCccccccEEEEEecCCeEEEEECCCc----------eEEEeeecCCCeeEEEE------ecCCCEEEEEe
Q 038802 276 GNESGEEAMQYRILSVALDGYMKVFDYGKM----------KVTHSMRFPAPLMSVAF------SPDCMTRVIGT 333 (532)
Q Consensus 276 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----------~~~~~~~~~~~v~~~~~------s~~~~~l~~g~ 333 (532)
+....+.--|..|.-|++... ..+..+...-.+-.+.- .|||++|++..
T Consensus 389 ---------G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 389 ---------GNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp ---------SEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred ---------CceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 545566668999999998763 45666653333333333 57888888875
No 319
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.55 E-value=0.06 Score=50.97 Aligned_cols=234 Identities=12% Similarity=0.052 Sum_probs=128.6
Q ss_pred ceeEEEEEccCCCEEEEEcCCCCEEEEECCCCc-eEEEec---CCCCCEEEEEeecC---CCcEEEEEeC---C----Ce
Q 038802 94 DVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRT-PLRRLK---SHTRPVRFVKYPFL---DKLHLVSGGD---D----GI 159 (532)
Q Consensus 94 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~-~~~~~~---~h~~~i~~~~~~~~---~~~~l~s~s~---d----g~ 159 (532)
.....++|.|+|+++++ ..+|.|.+++ .+++ .+..+. ........++|+|. ++.+.++-+. + +.
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 45688999999985555 5569999997 3444 222221 12356889999983 2444444332 3 67
Q ss_pred EEEEECCCC-------eEE-Eecc-CCCCceEEEEEeCCCCCEEEEEeC-------------CCeEEEEEcccCC-----
Q 038802 160 VKFWDVAGE-------SVV-LDLF-GHKDYVRCGDCSPVNGDMFVTGSY-------------DHTVKLWDVRVEN----- 212 (532)
Q Consensus 160 i~iwd~~~~-------~~~-~~~~-~~~~~v~~i~~~~~~~~~l~s~s~-------------dg~i~iwd~~~~~----- 212 (532)
|..|+.... +.+ ..+. ........++|.| ++.++++.+. .|.|.-++....-
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 888887654 111 1122 1111235789999 8887776432 2456666554210
Q ss_pred --ceeEEEecCCCcEEEEEEec-CCCEEEEEcC-C---eEEEEEccC--------C-------CeeeEEccCCCcceEEE
Q 038802 213 --SKSVMEVNHGKPIEDVMFLP-SGGLIATAGG-N---SVKIWDLIG--------G-------GKMVYSMESHNKTVTSV 270 (532)
Q Consensus 213 --~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~d-~---~i~iwd~~~--------~-------~~~~~~~~~~~~~i~~~ 270 (532)
...++..++. ....++|+| ++.++++-.. + .|.+..--. + ..++..+.........+
T Consensus 186 f~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~ 264 (354)
T 3a9g_A 186 FPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGA 264 (354)
T ss_dssp STTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEE
T ss_pred CCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcce
Confidence 1233333443 346799999 6776666542 1 344432110 0 01223331122356777
Q ss_pred EEeccCCCCCccccccEEEEEecCCeEEEEECCCc-eEE--Eeee--cCCCeeEEEEecCCCEEEEEe
Q 038802 271 CVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM-KVT--HSMR--FPAPLMSVAFSPDCMTRVIGT 333 (532)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~--~~~~--~~~~v~~~~~s~~~~~l~~g~ 333 (532)
.|....... ...+.++++.-..+.|...++... +.. ..+- ....+..+++.|||.+.++..
T Consensus 265 ~~y~g~~fp--~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 265 SFVHGDMFP--GLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EECCSSSCG--GGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EEECCCCCc--ccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 775321110 012566666666778988888753 332 2221 135789999999997666654
No 320
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.50 E-value=0.0082 Score=57.04 Aligned_cols=144 Identities=19% Similarity=0.231 Sum_probs=98.1
Q ss_pred CCCEEEEEeCCCeEEEEEcccCCceeEEEecC---CCcEEEEEEecCCCEEEEEcCCeEEEEEccCCC---e--------
Q 038802 190 NGDMFVTGSYDHTVKLWDVRVENSKSVMEVNH---GKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGG---K-------- 255 (532)
Q Consensus 190 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~---~-------- 255 (532)
++.-++.+- ++.||.-++.....-..+...+ -..|..+..+|+|++||..++..|.|..+..+. .
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~ 109 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAF 109 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccccc
Confidence 455555443 4678877877544444444442 236788999999999999999999999987321 0
Q ss_pred ee--EEccC----CCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc--eEEEeee----------cCCCe
Q 038802 256 MV--YSMES----HNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM--KVTHSMR----------FPAPL 317 (532)
Q Consensus 256 ~~--~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~----------~~~~v 317 (532)
.. ..+.. ...+|..+.|+|.+.. +..|++-..|+.|++||+... ++. .++ ....|
T Consensus 110 q~~ty~l~~~~~~~~s~I~qVlWHPl~~~------ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 110 QIFHYSIDEEEVGPKSSIKKVLFHPKSYR------DSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp EEEEEEGGGCC--CCCCEEEEEECTTBGG------GCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCE
T ss_pred ceeEEEcCCcccCCCCceeEEEeccccCC------CCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceE
Confidence 01 12211 2567999999998742 678999999999999999851 111 221 12468
Q ss_pred eEEEEecCCCEEEEEe--cCCcEEEE
Q 038802 318 MSVAFSPDCMTRVIGT--SNGTIFAG 341 (532)
Q Consensus 318 ~~~~~s~~~~~l~~g~--~dg~i~iw 341 (532)
.+++|.++|-.|++.+ .+|.|+-.
T Consensus 183 ~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 183 TDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 8899999887777755 77777653
No 321
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.43 E-value=0.028 Score=52.13 Aligned_cols=225 Identities=12% Similarity=0.095 Sum_probs=113.0
Q ss_pred CCCeEEEEEe----CCeEEEEeCCCceEEEEe--eccCceeEEEEEccCCCEEEEEcC----C-----CCEEEEECCCCc
Q 038802 62 TTSHLFAATH----SASLTLFSSQTLEKHSAI--SSFKDVVTCSSFRPDGSLLAASDL----S-----GLIQVFDVKSRT 126 (532)
Q Consensus 62 ~~~~l~~~~~----d~~v~i~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~g~~----d-----g~i~iwd~~~~~ 126 (532)
++..++.|+. -..+.+||..+.+-...- .........+ ..++.+++.|+. + ..+.+||..+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGC--VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEE--EECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 4455555553 246889998776533221 1111111122 226777777765 2 468899988765
Q ss_pred eEEE--ecCCCCCEEEEEeecCCCcEEEEEeCC-----CeEEEEECCCCeEEEec--cCCCCceEEEEEeCCCCCEEEEE
Q 038802 127 PLRR--LKSHTRPVRFVKYPFLDKLHLVSGGDD-----GIVKFWDVAGESVVLDL--FGHKDYVRCGDCSPVNGDMFVTG 197 (532)
Q Consensus 127 ~~~~--~~~h~~~i~~~~~~~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~--~~~~~~v~~i~~~~~~~~~l~s~ 197 (532)
-... +.........+.+ ++.+++.|+.+ ..+.+||..+.+-...- ....... +++.. ++.+++.|
T Consensus 102 W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~G 175 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI---DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGV-GVAVL--NRLLYAVG 175 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE---TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE--TTEEEEEC
T ss_pred EeECCCCCcCccccEEEEE---CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccce-EEEEE--CCEEEEEe
Confidence 3322 1111112222222 56677776643 35888998876543221 1111111 22222 56777777
Q ss_pred eCC-----CeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C-----CeEEEEEccCCCeeeE--EccCCC
Q 038802 198 SYD-----HTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G-----NSVKIWDLIGGGKMVY--SMESHN 264 (532)
Q Consensus 198 s~d-----g~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d-----~~i~iwd~~~~~~~~~--~~~~~~ 264 (532)
+.+ ..+.+||+.+..-...........-.+++.. ++.+++.|+ + ..+.+||+.+. .-.. .+....
T Consensus 176 G~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r 253 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETE-TWTFVAPMKHRR 253 (308)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT-EEEECCCCSSCC
T ss_pred CCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCC-cEEECCCCCCCc
Confidence 765 3588899876433222222222222223333 667777765 3 46899998765 2111 111111
Q ss_pred cceEEEEEeccCCCCCccccccEEEEEecC-----CeEEEEECCCceE
Q 038802 265 KTVTSVCVGRVGNESGEEAMQYRILSVALD-----GYMKVFDYGKMKV 307 (532)
Q Consensus 265 ~~i~~~~~~~~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~ 307 (532)
... +++.. + +.+++.|+.+ ..+.+||+.+.+-
T Consensus 254 ~~~-~~~~~-~---------~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 254 SAL-GITVH-Q---------GRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp BSC-EEEEE-T---------TEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred cce-EEEEE-C---------CEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 111 22222 2 4567777654 4578888876543
No 322
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.38 E-value=0.023 Score=52.61 Aligned_cols=223 Identities=12% Similarity=0.103 Sum_probs=111.6
Q ss_pred CCCEEEEEcCC----CCEEEEECCCCceEEE--ecCCCCCEEEEEeecCCCcEEEEEeC----C-----CeEEEEECCCC
Q 038802 104 DGSLLAASDLS----GLIQVFDVKSRTPLRR--LKSHTRPVRFVKYPFLDKLHLVSGGD----D-----GIVKFWDVAGE 168 (532)
Q Consensus 104 ~~~~l~~g~~d----g~i~iwd~~~~~~~~~--~~~h~~~i~~~~~~~~~~~~l~s~s~----d-----g~i~iwd~~~~ 168 (532)
++.+++.|+.+ ..+.+||..+.+-... +......- +++.. ++.+++.|+. + ..+.+||..+.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 55666666632 3688899877653322 11111111 22222 6667777765 2 35888998876
Q ss_pred eEEEec--cCCCCceEEEEEeCCCCCEEEEEeCC-----CeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc
Q 038802 169 SVVLDL--FGHKDYVRCGDCSPVNGDMFVTGSYD-----HTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG 241 (532)
Q Consensus 169 ~~~~~~--~~~~~~v~~i~~~~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 241 (532)
+-...- ....... +++.. ++.+++.|+.+ ..+.+||+.+.+-...........-.+++.. ++.+++.|+
T Consensus 101 ~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 176 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRI-GVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGG 176 (308)
T ss_dssp EEEECCCCSSCCBTC-EEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred eEeECCCCCcCcccc-EEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeC
Confidence 533221 1111111 22222 56777777654 3588888876433222222222111222332 666777665
Q ss_pred -C-----CeEEEEEccCCCeee--EEccCCCcceEEEEEeccCCCCCccccccEEEEEecC-----CeEEEEECCCceEE
Q 038802 242 -G-----NSVKIWDLIGGGKMV--YSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALD-----GYMKVFDYGKMKVT 308 (532)
Q Consensus 242 -d-----~~i~iwd~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~ 308 (532)
+ +.+.+||+.+. .-. ..+.........+.+ + +.+++.|+.+ ..+.+||+.+.+-.
T Consensus 177 ~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~~~~--~---------~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPERN-EWRMITAMNTIRSGAGVCVL--H---------NCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp BCSSCBCCCEEEEETTTT-EEEECCCCSSCCBSCEEEEE--T---------TEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCCCCcCceEEEEeCCCC-eEeeCCCCCCccccceEEEE--C---------CEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 3 36889998765 211 111111111122222 2 4567777664 46899999886544
Q ss_pred EeeecCC--CeeEEEEecCCCEEEEEecCC-----cEEEEeecCc
Q 038802 309 HSMRFPA--PLMSVAFSPDCMTRVIGTSNG-----TIFAGRRKKK 346 (532)
Q Consensus 309 ~~~~~~~--~v~~~~~s~~~~~l~~g~~dg-----~i~iw~~~~~ 346 (532)
..-..+. .-.+++. -+++.++.|+.++ .+.+||..+.
T Consensus 245 ~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 245 FVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp ECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 3322221 1122222 3567777777543 3566665543
No 323
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.31 E-value=0.061 Score=49.94 Aligned_cols=209 Identities=12% Similarity=0.026 Sum_probs=103.3
Q ss_pred EEEEEcCCCCEEEEECCCCceEE-EecCC-CCCEEEEEeecCCCcEEEEEeC-----C------CeEEEEECCCCeEEEe
Q 038802 107 LLAASDLSGLIQVFDVKSRTPLR-RLKSH-TRPVRFVKYPFLDKLHLVSGGD-----D------GIVKFWDVAGESVVLD 173 (532)
Q Consensus 107 ~l~~g~~dg~i~iwd~~~~~~~~-~~~~h-~~~i~~~~~~~~~~~~l~s~s~-----d------g~i~iwd~~~~~~~~~ 173 (532)
+++.|+ ..+.+||..+++-.. .+... ...-.+++. . ++..++.|+. . ..+..||..+.+-..
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~- 81 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVT-K-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG- 81 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEEC-T-TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEE-E-CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-
Confidence 344555 568999998876432 12111 122223332 3 6777777773 1 127788988775432
Q ss_pred ccCCCCce--EEEEEeCCCCCEEEEEeCC--------CeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEcC-
Q 038802 174 LFGHKDYV--RCGDCSPVNGDMFVTGSYD--------HTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGG- 242 (532)
Q Consensus 174 ~~~~~~~v--~~i~~~~~~~~~l~s~s~d--------g~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d- 242 (532)
+.....+- .+++.. ++.+++.|+.+ ..+.+||..+.+-...........-.+++. -++++++.|+.
T Consensus 82 ~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 158 (315)
T 4asc_A 82 MPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKG 158 (315)
T ss_dssp CCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBC
T ss_pred CCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCC
Confidence 21111111 122222 56777777743 358889987643222222222222222333 35666666652
Q ss_pred ------CeEEEEEccCCC-eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCC-----eEEEEECCCceEEEe
Q 038802 243 ------NSVKIWDLIGGG-KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDG-----YMKVFDYGKMKVTHS 310 (532)
Q Consensus 243 ------~~i~iwd~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~ 310 (532)
+.+.+||+.+.. ..+..+.........+.+ + +.+++.|+.++ .+.+||+.+.+-...
T Consensus 159 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~---------~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 227 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--D---------GRIIVAAGVTDTGLTSSAEVYSITDNKWAPF 227 (315)
T ss_dssp TTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--T---------TEEEEEEEECSSSEEEEEEEEETTTTEEEEE
T ss_pred CCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--C---------CEEEEEeccCCCCccceEEEEECCCCeEEEC
Confidence 368899987651 111111111111122222 2 46677777654 588999987654333
Q ss_pred eecC--CCeeEEEEecCCCEEEEEecC
Q 038802 311 MRFP--APLMSVAFSPDCMTRVIGTSN 335 (532)
Q Consensus 311 ~~~~--~~v~~~~~s~~~~~l~~g~~d 335 (532)
-..+ ..-.+++. -+++.++.|+.+
T Consensus 228 ~~~p~~r~~~~~~~-~~~~l~v~GG~~ 253 (315)
T 4asc_A 228 EAFPQERSSLSLVS-LVGTLYAIGGFA 253 (315)
T ss_dssp CCCSSCCBSCEEEE-ETTEEEEEEEEE
T ss_pred CCCCCcccceeEEE-ECCEEEEECCcc
Confidence 2222 11122222 356777777764
No 324
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.25 E-value=0.14 Score=48.43 Aligned_cols=217 Identities=12% Similarity=0.135 Sum_probs=117.8
Q ss_pred cCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEee-------ccCceeEEEEEccC---CCEEEEEc-C-------
Q 038802 52 SSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAIS-------SFKDVVTCSSFRPD---GSLLAASD-L------- 113 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~-------~~~~~v~~~~~~~~---~~~l~~g~-~------- 113 (532)
.....|+|.|+|+.++++...|.|++++.. +.....+. ........++|+|+ +..|+++. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 356799999999856667778999999854 33221111 12345689999996 45555442 2
Q ss_pred CCCEEEEECCCC--c--eEE----Eec-----CCCCCEEEEEeecCCCcEEEEEeC-------------CCeEEEEECCC
Q 038802 114 SGLIQVFDVKSR--T--PLR----RLK-----SHTRPVRFVKYPFLDKLHLVSGGD-------------DGIVKFWDVAG 167 (532)
Q Consensus 114 dg~i~iwd~~~~--~--~~~----~~~-----~h~~~i~~~~~~~~~~~~l~s~s~-------------dg~i~iwd~~~ 167 (532)
...|..|+.... . ... .+. .|. ...+.|.| ++.+.++.+. .|.|.-++...
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 235666666432 1 111 111 132 35699999 8866665543 24677777653
Q ss_pred C-------------e-EEEeccCCCCceEEEEEeCCCCCEEEEEeCCC--eEEEEEcccCC-------------------
Q 038802 168 E-------------S-VVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDH--TVKLWDVRVEN------------------- 212 (532)
Q Consensus 168 ~-------------~-~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg--~i~iwd~~~~~------------------- 212 (532)
. . .+. -.++. ....++|.|.++.++++ .... .=.|.-+..+.
T Consensus 174 ~~p~~npf~~~~~~~~~i~-a~G~r-np~gl~~d~~~g~l~~~-d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~ 250 (353)
T 2g8s_A 174 EIPDDNPFIKESGVRAEIW-SYGIR-NPQGMAMNPWSNALWLN-EHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIP 250 (353)
T ss_dssp CCCTTCTTTTSTTSCTTEE-EECCS-EEEEEEEETTTTEEEEE-EECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCT
T ss_pred CCCCCCCCcCCCCCCccEE-EEcCc-CccceEEECCCCCEEEE-ecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccC
Confidence 2 0 111 12333 35678999833444443 3221 11111111100
Q ss_pred ----------ceeEEEecCCCcEEEEEEec-------CCCEEEEEc-CCeEEEEEccCCCeeeEE---ccCCCcceEEEE
Q 038802 213 ----------SKSVMEVNHGKPIEDVMFLP-------SGGLIATAG-GNSVKIWDLIGGGKMVYS---MESHNKTVTSVC 271 (532)
Q Consensus 213 ----------~~~~~~~~~~~~v~~i~~~~-------~~~~l~~~~-d~~i~iwd~~~~~~~~~~---~~~~~~~i~~~~ 271 (532)
........+......+.|.. +|.++++.. .+.|...++..+ ..... +......+..++
T Consensus 251 ~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~rp~~v~ 329 (353)
T 2g8s_A 251 EAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD-KVTEDGRILTDRGQRIRDVR 329 (353)
T ss_dssp TCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT-EEEEEEEESGGGCCCEEEEE
T ss_pred cccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCC-eEeeeEEcccCCCCceeEEE
Confidence 11122233444677788864 466776665 678888888754 33322 222234688899
Q ss_pred EeccC
Q 038802 272 VGRVG 276 (532)
Q Consensus 272 ~~~~~ 276 (532)
+.|+|
T Consensus 330 ~~pdG 334 (353)
T 2g8s_A 330 TGPDG 334 (353)
T ss_dssp ECTTS
T ss_pred ECCCC
Confidence 98884
No 325
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.11 E-value=0.19 Score=47.25 Aligned_cols=186 Identities=12% Similarity=0.155 Sum_probs=107.7
Q ss_pred CEEEEEeecCCCcEEEEE------------eCCCeEEEEECCC--CeEE-EeccC-----CCCceEEEEEeCC-CCC--E
Q 038802 137 PVRFVKYPFLDKLHLVSG------------GDDGIVKFWDVAG--ESVV-LDLFG-----HKDYVRCGDCSPV-NGD--M 193 (532)
Q Consensus 137 ~i~~~~~~~~~~~~l~s~------------s~dg~i~iwd~~~--~~~~-~~~~~-----~~~~v~~i~~~~~-~~~--~ 193 (532)
...++...| ++..++++ ..+|.|.++|..+ ++.. ..+.+ .......+.+.+. ++. +
T Consensus 51 G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 345666666 55444443 2689999999873 2221 11222 2235566776552 232 4
Q ss_pred EEEEeC--CCeEEEEEcccCCceeEE--Eec--CCCcEEEEEEecCCCEEEEEc----C--------------CeEEEEE
Q 038802 194 FVTGSY--DHTVKLWDVRVENSKSVM--EVN--HGKPIEDVMFLPSGGLIATAG----G--------------NSVKIWD 249 (532)
Q Consensus 194 l~s~s~--dg~i~iwd~~~~~~~~~~--~~~--~~~~v~~i~~~~~~~~l~~~~----d--------------~~i~iwd 249 (532)
+++-.. +.+|.+|++......... ... .-...+.+.+.++|.+.++.. | |.|..+|
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 444333 567888887654332222 222 234578999999999887754 1 3454555
Q ss_pred ccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC-ceE--EEeeecCCCeeEEEEec-C
Q 038802 250 LIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK-MKV--THSMRFPAPLMSVAFSP-D 325 (532)
Q Consensus 250 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~--~~~~~~~~~v~~~~~s~-~ 325 (532)
. + +.. .+...-..-+.++|+|++ ..++++-+..+.|..|++.. +.. ...+..++..-.+++.+ +
T Consensus 210 ~--~-~~~-~~~~~l~~pNGia~spDg--------~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~ 277 (355)
T 3sre_A 210 P--N-DVR-VVAEGFDFANGINISPDG--------KYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVT 277 (355)
T ss_dssp T--T-CCE-EEEEEESSEEEEEECTTS--------SEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTT
T ss_pred C--C-eEE-EeecCCcccCcceECCCC--------CEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCC
Confidence 3 2 221 222222346889999995 34555556678999999863 332 23444556778889998 5
Q ss_pred CCEEEEEecC
Q 038802 326 CMTRVIGTSN 335 (532)
Q Consensus 326 ~~~l~~g~~d 335 (532)
|.+.+++..+
T Consensus 278 G~lwva~~~~ 287 (355)
T 3sre_A 278 GDLWVGCHPN 287 (355)
T ss_dssp CCEEEEEESC
T ss_pred CcEEEEecCC
Confidence 8887766544
No 326
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.05 E-value=0.049 Score=50.58 Aligned_cols=176 Identities=11% Similarity=0.032 Sum_probs=88.3
Q ss_pred EEcCCCCeEEEEEe----C-------CeEEEEeCCCceEEEEeeccC--ceeEEEEEccCCCEEEEEcCC--------CC
Q 038802 58 VFSPTTSHLFAATH----S-------ASLTLFSSQTLEKHSAISSFK--DVVTCSSFRPDGSLLAASDLS--------GL 116 (532)
Q Consensus 58 ~~sp~~~~l~~~~~----d-------~~v~i~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~g~~d--------g~ 116 (532)
....++..++.|+. + ..+.+||..+.+-...-.... .....+. -++++++.|+.+ ..
T Consensus 41 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~ 118 (315)
T 4asc_A 41 LVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGE--ALNSIYVVGGREIKDGERCLDS 118 (315)
T ss_dssp EECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEE--ETTEEEEECCEESSTTCCBCCC
T ss_pred EEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEE--ECCEEEEEeCCcCCCCCcccce
Confidence 33456777777774 1 237888988765322111111 1111222 266777777632 45
Q ss_pred EEEEECCCCceEEE--ecCCCCCEEEEEeecCCCcEEEEEeC-C-----CeEEEEECCCCeEEEeccCC-CCceEEEEEe
Q 038802 117 IQVFDVKSRTPLRR--LKSHTRPVRFVKYPFLDKLHLVSGGD-D-----GIVKFWDVAGESVVLDLFGH-KDYVRCGDCS 187 (532)
Q Consensus 117 i~iwd~~~~~~~~~--~~~h~~~i~~~~~~~~~~~~l~s~s~-d-----g~i~iwd~~~~~~~~~~~~~-~~~v~~i~~~ 187 (532)
+.+||..+.+-... +......-.++.+ ++..++.|+. + ..+.+||+.+.+-...-... ...-.+++..
T Consensus 119 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 195 (315)
T 4asc_A 119 VMCYDRLSFKWGESDPLPYVVYGHTVLSH---MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH 195 (315)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred EEEECCCCCcEeECCCCCCcccceeEEEE---CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE
Confidence 89999887643221 1111111122222 6677777776 2 46899998876533221111 1111122222
Q ss_pred CCCCCEEEEEeCCC-----eEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc
Q 038802 188 PVNGDMFVTGSYDH-----TVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG 241 (532)
Q Consensus 188 ~~~~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 241 (532)
++.+++.|+.++ .+.+||+.+.+-...........-.+++.. ++++++.|+
T Consensus 196 --~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG 251 (315)
T 4asc_A 196 --DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL-VGTLYAIGG 251 (315)
T ss_dssp --TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEE
T ss_pred --CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE-CCEEEEECC
Confidence 567888887654 488889877533332222222222223332 556666665
No 327
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.05 E-value=0.055 Score=51.27 Aligned_cols=229 Identities=11% Similarity=0.010 Sum_probs=109.9
Q ss_pred CCCEEEEEcC-CCCEEEEECCC--CceE--EEec-CCCCCEEEEEeecCCCcEEEEEeC-C---------CeEEEEECCC
Q 038802 104 DGSLLAASDL-SGLIQVFDVKS--RTPL--RRLK-SHTRPVRFVKYPFLDKLHLVSGGD-D---------GIVKFWDVAG 167 (532)
Q Consensus 104 ~~~~l~~g~~-dg~i~iwd~~~--~~~~--~~~~-~h~~~i~~~~~~~~~~~~l~s~s~-d---------g~i~iwd~~~ 167 (532)
++++++.|+. ...+.+||..+ .+-. ..+. .....-.++.+ ++.+++.|+. + ..+.+||..+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI---DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE---TTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE---CCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 5556566653 34688888863 2221 1111 11111122222 5667777765 2 4688999987
Q ss_pred CeEEEeccCC-CC-ceEEEEEeCCCCCEEEEEeCC---------------------------------------CeEEEE
Q 038802 168 ESVVLDLFGH-KD-YVRCGDCSPVNGDMFVTGSYD---------------------------------------HTVKLW 206 (532)
Q Consensus 168 ~~~~~~~~~~-~~-~v~~i~~~~~~~~~l~s~s~d---------------------------------------g~i~iw 206 (532)
.+-...-... .. .-.+++. . ++.+++.|+.+ ..+.+|
T Consensus 96 ~~W~~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 173 (357)
T 2uvk_A 96 NSWVKLMSHAPMGMAGHVTFV-H-NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF 173 (357)
T ss_dssp TEEEECSCCCSSCCSSEEEEE-E-TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE
T ss_pred CcEEECCCCCCcccccceEEE-E-CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEE
Confidence 6533321111 11 1112222 3 67888888765 468899
Q ss_pred EcccCCceeEEEecCCCcE-EEEEEecCCCEEEEEc-C------CeEEEEEccCCCeeeEEccC---CCcce-EEEEEec
Q 038802 207 DVRVENSKSVMEVNHGKPI-EDVMFLPSGGLIATAG-G------NSVKIWDLIGGGKMVYSMES---HNKTV-TSVCVGR 274 (532)
Q Consensus 207 d~~~~~~~~~~~~~~~~~v-~~i~~~~~~~~l~~~~-d------~~i~iwd~~~~~~~~~~~~~---~~~~i-~~~~~~~ 274 (532)
|+.+..-...-.......- .+++.. ++.+++.|+ + ..+.+||+......-..+.. ..... .+++. .
T Consensus 174 d~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~-~ 251 (357)
T 2uvk_A 174 DPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGI-S 251 (357)
T ss_dssp ETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEE-E
T ss_pred eCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEE-E
Confidence 9887544443333322222 233333 566666665 2 35777876211111122111 11111 11222 2
Q ss_pred cCCCCCccccccEEEEEecC----------------------CeEEEEECCCc--eEEEeeecCCCeeEEEEecCCCEEE
Q 038802 275 VGNESGEEAMQYRILSVALD----------------------GYMKVFDYGKM--KVTHSMRFPAPLMSVAFSPDCMTRV 330 (532)
Q Consensus 275 ~~~~~~~~~~~~~l~s~~~d----------------------g~i~iwd~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~ 330 (532)
+ +.+++.|+.+ ..+.+||+.+. ..+..+..+.. ...+...+++.++
T Consensus 252 ~---------~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~i~v 321 (357)
T 2uvk_A 252 N---------DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRA-YGVSLPWNNSLLI 321 (357)
T ss_dssp T---------TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCB-SSEEEEETTEEEE
T ss_pred C---------CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcc-cceeEEeCCEEEE
Confidence 2 4566666642 25788998764 44433332211 1222345678888
Q ss_pred EEecCC------cEEEEeecCcccc
Q 038802 331 IGTSNG------TIFAGRRKKKENV 349 (532)
Q Consensus 331 ~g~~dg------~i~iw~~~~~~~~ 349 (532)
.|+.++ .|.++++++++..
T Consensus 322 ~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 322 IGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp EEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred EeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 888653 3555677766544
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.98 E-value=0.15 Score=47.46 Aligned_cols=201 Identities=13% Similarity=0.085 Sum_probs=107.4
Q ss_pred CEEEEEcCCCCEEEEECCCCceEEEecCC-CCCEEEEEee--cCCCcEEEEE-eCCCeEEEEECCCCeEEEeccC----C
Q 038802 106 SLLAASDLSGLIQVFDVKSRTPLRRLKSH-TRPVRFVKYP--FLDKLHLVSG-GDDGIVKFWDVAGESVVLDLFG----H 177 (532)
Q Consensus 106 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~h-~~~i~~~~~~--~~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~----~ 177 (532)
..+++++.||.|.-+|..+|+....+... ..++....-. +.++..++.. +.||.|..++..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47888899999999999999999888754 1222221100 1122333333 5899999999988865543321 2
Q ss_pred CCceEEEEEeC--------CCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCc------EEEEEEe-----cCCCEEE
Q 038802 178 KDYVRCGDCSP--------VNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKP------IEDVMFL-----PSGGLIA 238 (532)
Q Consensus 178 ~~~v~~i~~~~--------~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~------v~~i~~~-----~~~~~l~ 238 (532)
..++.. .-.| ..+..+++|+.+|.+...|+++++..-.+....... ..|.... ..+..++
T Consensus 91 ~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ 169 (339)
T 2be1_A 91 TSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TCSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred cccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence 222221 1000 035678999999999999999977665554332111 0111110 1123444
Q ss_pred EEc-CCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCC------CCccccccEEEEEecCCeEEEEECCCceEEE-e
Q 038802 239 TAG-GNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNE------SGEEAMQYRILSVALDGYMKVFDYGKMKVTH-S 310 (532)
Q Consensus 239 ~~~-d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~ 310 (532)
.+. +..+.+.+ +++ . ..... --.+.+.... .....++.+ +.++.||.|.-+|..++..+. .
T Consensus 170 ig~~~y~v~~~~-~sG-~-~W~~~-------~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W~~ 238 (339)
T 2be1_A 170 IGKTIFELGIHS-YDG-A-SYNVT-------YSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARWVS 238 (339)
T ss_dssp EEEEEEECEECC-TTS-C-CCCCE-------EEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEEEC
T ss_pred EecceEEEEEEC-CCC-C-eEEEe-------cccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEEEe
Confidence 444 55555555 222 1 11110 0011111000 000001233 567889999999999988876 5
Q ss_pred eecCCCee
Q 038802 311 MRFPAPLM 318 (532)
Q Consensus 311 ~~~~~~v~ 318 (532)
.+...++.
T Consensus 239 ~~l~sPv~ 246 (339)
T 2be1_A 239 PTFPGIIV 246 (339)
T ss_dssp CCCSSCEE
T ss_pred ecCCCCeE
Confidence 55555543
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.96 E-value=0.17 Score=46.94 Aligned_cols=209 Identities=16% Similarity=0.104 Sum_probs=99.7
Q ss_pred EEEEEcCCCCEEEEECCCCceEEE-ecC-CCCCEEEEEeecCCCcEEEEEeC----CC-------eEEEEECCCCeEEEe
Q 038802 107 LLAASDLSGLIQVFDVKSRTPLRR-LKS-HTRPVRFVKYPFLDKLHLVSGGD----DG-------IVKFWDVAGESVVLD 173 (532)
Q Consensus 107 ~l~~g~~dg~i~iwd~~~~~~~~~-~~~-h~~~i~~~~~~~~~~~~l~s~s~----dg-------~i~iwd~~~~~~~~~ 173 (532)
+++.|+. .+.+||..+++-... ... ....-.+++. . ++..++.|+. ++ .+..||..+.+-...
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 93 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVT-Q-QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL 93 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEEC-S-SSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEE-E-CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC
Confidence 3444443 378899887764331 111 1112233332 2 6777777773 12 277889877654332
Q ss_pred c--cCCCCceEEEEEeCCCCCEEEEEeCC-------CeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C-
Q 038802 174 L--FGHKDYVRCGDCSPVNGDMFVTGSYD-------HTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G- 242 (532)
Q Consensus 174 ~--~~~~~~v~~i~~~~~~~~~l~s~s~d-------g~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d- 242 (532)
- ...... .+++.. ++.+++.|+.+ ..+.+||+.+.+-...........-.+++. .++.+++.|+ +
T Consensus 94 ~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~ 169 (318)
T 2woz_A 94 PPLPSARCL-FGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTD 169 (318)
T ss_dssp SCBSSCBCS-CEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEES
T ss_pred CCCCccccc-cceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCC
Confidence 1 111111 122222 56777777764 247888887643332211111111112222 4667766665 2
Q ss_pred -----CeEEEEEccCCC-eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecC-----CeEEEEECCCceEEEee
Q 038802 243 -----NSVKIWDLIGGG-KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALD-----GYMKVFDYGKMKVTHSM 311 (532)
Q Consensus 243 -----~~i~iwd~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~ 311 (532)
+.+.+||+.+.. ..+..+...... .+++.. + +..++.|+.+ ..+.+||+.+.+-...-
T Consensus 170 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~---------~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 170 DKKCTNRVFIYNPKKGDWKDLAPMKTPRSM-FGVAIH-K---------GKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-T---------TEEEEEEEEETTEEEEEEEEEETTTCCEEECC
T ss_pred CCCccceEEEEcCCCCEEEECCCCCCCccc-ceEEEE-C---------CEEEEEcCcCCCCccceEEEEECCCCeEEECC
Confidence 358899987652 111111111111 122222 2 4566666653 35778998875543322
Q ss_pred ecCCC--eeEEEEecCCCEEEEEecC
Q 038802 312 RFPAP--LMSVAFSPDCMTRVIGTSN 335 (532)
Q Consensus 312 ~~~~~--v~~~~~s~~~~~l~~g~~d 335 (532)
..+.+ -.+++ ..+++.++.|+.+
T Consensus 239 ~~p~~r~~~~~~-~~~~~i~v~GG~~ 263 (318)
T 2woz_A 239 EFPQERSSISLV-SLAGSLYAIGGFA 263 (318)
T ss_dssp CCSSCCBSCEEE-EETTEEEEECCBC
T ss_pred CCCCcccceEEE-EECCEEEEECCee
Confidence 22211 11222 2356677777654
No 330
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.85 E-value=0.35 Score=46.16 Aligned_cols=207 Identities=13% Similarity=0.167 Sum_probs=127.1
Q ss_pred eeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC-CceEEEec
Q 038802 54 INSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS-RTPLRRLK 132 (532)
Q Consensus 54 V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~ 132 (532)
--+.-.+|..+.+|.=. ...+.|||+++...++...-.. .|.-=.|-.+ +.|+..+ +..|+-|++.. ..+.+.+.
T Consensus 68 AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~-~~l~lVT-~taVyHWsi~~~s~P~kvFd 143 (494)
T 1bpo_A 68 ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFD 143 (494)
T ss_dssp CSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEET-TEEEEEC-SSEEEEEESSSSCCCEEEEE
T ss_pred cceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCC-CeEEEEc-CCeeEEecccCCCCchhhee
Confidence 34566788888666654 7899999999988888776644 4444455443 3555555 56799999964 35566665
Q ss_pred CC----CCCEEEEEeecCCCcEEEEEe-------CCCeEEEEECCCCeEEEeccCCCCceEEEEEeCC--CCCEEEEEeC
Q 038802 133 SH----TRPVRFVKYPFLDKLHLVSGG-------DDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPV--NGDMFVTGSY 199 (532)
Q Consensus 133 ~h----~~~i~~~~~~~~~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~l~s~s~ 199 (532)
.| ...|..-..++ +.++++..| -.|.+.+|..+.+ ..+.+.+|......+..... ...+|+.+..
T Consensus 144 R~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r 221 (494)
T 1bpo_A 144 RHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVR 221 (494)
T ss_dssp CCGGGTTCEEEEEEECT-TSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEEC
T ss_pred cchhcccceEEEEEECC-CCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEe
Confidence 44 34565666676 666655433 2477889998754 44567778665544433210 1124444444
Q ss_pred C---CeEEEEEcccC-Cc-----eeEEE--ec---CCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCC
Q 038802 200 D---HTVKLWDVRVE-NS-----KSVME--VN---HGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHN 264 (532)
Q Consensus 200 d---g~i~iwd~~~~-~~-----~~~~~--~~---~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~ 264 (532)
. +.+++.++... .. ..... ++ ..+--.++..++...++..-+ -|.+.+||+.++ .++..-.-..
T Consensus 222 ~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTg-t~i~~nrIs~ 300 (494)
T 1bpo_A 222 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG-TCIYMNRISG 300 (494)
T ss_dssp STTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC-CEEEEEECCS
T ss_pred cCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccc-eeeeeecccC
Confidence 2 78999988543 01 11111 11 122335678888777766666 899999999998 5555444333
Q ss_pred cce
Q 038802 265 KTV 267 (532)
Q Consensus 265 ~~i 267 (532)
.+|
T Consensus 301 ~~i 303 (494)
T 1bpo_A 301 ETI 303 (494)
T ss_dssp SCE
T ss_pred Cce
Confidence 343
No 331
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.84 E-value=0.28 Score=44.89 Aligned_cols=233 Identities=12% Similarity=0.150 Sum_probs=137.9
Q ss_pred eEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC-CceEEEecC
Q 038802 55 NSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS-RTPLRRLKS 133 (532)
Q Consensus 55 ~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~ 133 (532)
-+.-.+|..+.+|.-. ...+.|||+++...++...-. ..|.-=.|-.+ +.|+..+ +..|+-|+++. ..+.+.+..
T Consensus 70 dsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~-~~L~lVT-~taVyHWs~~~~s~P~kvFdR 145 (365)
T 2xzh_A 70 DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDR 145 (365)
T ss_dssp SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSS-SEEEEEE-SSEEEEEESSTTCCCEEEEEC
T ss_pred ceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCC-CeEEEEc-CCcEEEEcccCCCCCceeeec
Confidence 3556688888666655 789999999998888877664 45655566544 3555444 56799999974 355666654
Q ss_pred C----CCCEEEEEeecCCCcEEEEEe-------CCCeEEEEECCCCeEEEeccCCCCceEEEEEeCC--CCCEEEEEeC-
Q 038802 134 H----TRPVRFVKYPFLDKLHLVSGG-------DDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPV--NGDMFVTGSY- 199 (532)
Q Consensus 134 h----~~~i~~~~~~~~~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~l~s~s~- 199 (532)
| ...|..-..++ +.++++..+ -.|.+.+|..+.+ ..+.+.+|......+..... ...+|+.+..
T Consensus 146 ~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~ 223 (365)
T 2xzh_A 146 HSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRG 223 (365)
T ss_dssp CGGGTTCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEE
T ss_pred chhcccceEEEEEECC-CCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEec
Confidence 4 34555556666 566555443 2377889998754 45567777654433332210 1123443333
Q ss_pred --CCeEEEEEcccC-Cce-----eEEE--ec---CCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCc
Q 038802 200 --DHTVKLWDVRVE-NSK-----SVME--VN---HGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNK 265 (532)
Q Consensus 200 --dg~i~iwd~~~~-~~~-----~~~~--~~---~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~ 265 (532)
.+++++-++... ... .... ++ ..+--.++..++...++..-+ -|.+.+||+.++ .++..-.-...
T Consensus 224 ~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTg-t~i~~nrIS~d 302 (365)
T 2xzh_A 224 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG-TCIYMNRISGE 302 (365)
T ss_dssp TTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC-CEEEEEECCSS
T ss_pred CCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccC-cEEEEeccCCC
Confidence 258889888543 111 1111 11 122335677887766666666 899999999998 66655554455
Q ss_pred ceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECC
Q 038802 266 TVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYG 303 (532)
Q Consensus 266 ~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 303 (532)
+|...+.... ..=++.....|.|.-..++
T Consensus 303 ~iF~ta~~~~---------~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 303 TIFVTAPHEA---------TAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp CEEEEEEEGG---------GTEEEEEETTCEEEEEEEC
T ss_pred ceEEecccCC---------CCcEEEEcCCCEEEEEEEC
Confidence 5544444333 1224444455655444443
No 332
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.68 E-value=0.24 Score=46.13 Aligned_cols=192 Identities=15% Similarity=0.065 Sum_probs=106.4
Q ss_pred CeEEEEEeCCeEEEEeCCCceEEEEeecc-CceeEEEEE--cc-CCCEEEEE-cCCCCEEEEECCCCceEEEecC----C
Q 038802 64 SHLFAATHSASLTLFSSQTLEKHSAISSF-KDVVTCSSF--RP-DGSLLAAS-DLSGLIQVFDVKSRTPLRRLKS----H 134 (532)
Q Consensus 64 ~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~--~~-~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~----h 134 (532)
..+++++.||.|+-+|..+|+...++... ..++....- .+ ++..++.. +.||.+..++..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 36889999999999999999999888764 122222110 01 22333333 5799999999888754443321 2
Q ss_pred CCCEEEE---Ee-ec---CCCcEEEEEeCCCeEEEEECCCCeEEEeccCCC--Cc-----eEEEEEe----CCCCCEEEE
Q 038802 135 TRPVRFV---KY-PF---LDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHK--DY-----VRCGDCS----PVNGDMFVT 196 (532)
Q Consensus 135 ~~~i~~~---~~-~~---~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~--~~-----v~~i~~~----~~~~~~l~s 196 (532)
..++..- .. .+ ..+..+++|+.+|.+...|+.+|+.+..+.... .. ..|.... ...+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 2333210 00 00 035678999999999999999999998875321 10 1111110 012456777
Q ss_pred EeCCCeEEEEEcccCCceeEEEe----cCCC--cEE-EEEEecCCCEEEEEcCCeEEEEEccCCCeeeE
Q 038802 197 GSYDHTVKLWDVRVENSKSVMEV----NHGK--PIE-DVMFLPSGGLIATAGGNSVKIWDLIGGGKMVY 258 (532)
Q Consensus 197 ~s~dg~i~iwd~~~~~~~~~~~~----~~~~--~v~-~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~ 258 (532)
|..+..+.+.+ +++. .-.... .... ++. +-..+.++.++++..||.|.-+|..++ ..+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G-~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFR-IARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTC-CEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCC-cEEE
Confidence 77777777766 3332 111100 0000 000 000112466666666888888887766 4443
No 333
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.63 E-value=0.13 Score=49.02 Aligned_cols=144 Identities=11% Similarity=0.049 Sum_probs=95.4
Q ss_pred EcCCCCeEEEEEeCCeEEEEeCCCceEEEEeecc----CceeEEEEEccCCCEEEEEcCCCCEEEEECCCCc--------
Q 038802 59 FSPTTSHLFAATHSASLTLFSSQTLEKHSAISSF----KDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRT-------- 126 (532)
Q Consensus 59 ~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~-------- 126 (532)
.+.+|..++++- ++.||.-++......+.+... -+.|..+..+|+|++||..+ +..|.|..+..+.
T Consensus 28 ~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 28 SSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp EETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHH
T ss_pred EEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccc
Confidence 344566666554 588888887744434444332 22578899999999999987 5678898886321
Q ss_pred ----eEEEecC------CCCCEEEEEeecCC--CcEEEEEeCCCeEEEEECCCC--eEEEec---------cCCCCceEE
Q 038802 127 ----PLRRLKS------HTRPVRFVKYPFLD--KLHLVSGGDDGIVKFWDVAGE--SVVLDL---------FGHKDYVRC 183 (532)
Q Consensus 127 ----~~~~~~~------h~~~i~~~~~~~~~--~~~l~s~s~dg~i~iwd~~~~--~~~~~~---------~~~~~~v~~ 183 (532)
..+.+.- ...+|..+.|+|.. +..|++-..|+.|++||+... ++. .+ ......|.+
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEE
Confidence 1122221 35789999999843 448999999999999999752 122 22 122356788
Q ss_pred EEEeCCCCCEEEEEe--CCCeEEEE
Q 038802 184 GDCSPVNGDMFVTGS--YDHTVKLW 206 (532)
Q Consensus 184 i~~~~~~~~~l~s~s--~dg~i~iw 206 (532)
++|.+ ++-.|...+ .+|.|+-.
T Consensus 185 ~~Fg~-~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 185 LEFSK-DGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEECT-TSSCEEEEECTTSCEEEEE
T ss_pred EEEcC-CCcEEEEEecCCCCCEEEE
Confidence 89987 666666644 67777654
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.58 E-value=0.22 Score=51.91 Aligned_cols=220 Identities=11% Similarity=0.069 Sum_probs=109.7
Q ss_pred cCCCEEEEEcCC----CCEEEEECCCCceEEEe-c-------CCCCCEEEEEeecCCCcEEEEEeCC------CeEEEEE
Q 038802 103 PDGSLLAASDLS----GLIQVFDVKSRTPLRRL-K-------SHTRPVRFVKYPFLDKLHLVSGGDD------GIVKFWD 164 (532)
Q Consensus 103 ~~~~~l~~g~~d----g~i~iwd~~~~~~~~~~-~-------~h~~~i~~~~~~~~~~~~l~s~s~d------g~i~iwd 164 (532)
.++.+++.|+.+ ..+.+||..+++-...- . .....-.++.+.. ++..++.||.+ ..+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~-~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR-NNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT-TTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc-CCEEEEEcCCCCCCCccccEEEEe
Confidence 456667777643 46888888776543322 1 1111122333321 45666777644 3578899
Q ss_pred CCCCeEEEeccCC-CCceEEEEEeCCCCCEEEEEeCCC--eEEEEEcccCCceeEEE---ec-CCCcEEEEEEecC-CCE
Q 038802 165 VAGESVVLDLFGH-KDYVRCGDCSPVNGDMFVTGSYDH--TVKLWDVRVENSKSVME---VN-HGKPIEDVMFLPS-GGL 236 (532)
Q Consensus 165 ~~~~~~~~~~~~~-~~~v~~i~~~~~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~---~~-~~~~v~~i~~~~~-~~~ 236 (532)
..+.+-...-... ...-.+++... ++.+++.|+.++ .+.+||..+..-..... .. ......++.+..+ +.+
T Consensus 475 ~~t~~W~~~~~~p~~R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTTEEEECCCCSBCCBSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCCcEEECCCCCCCcccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 8876433221111 11111233323 678888888765 68999987743322221 11 1112233555554 666
Q ss_pred EEEEc-C-------CeEEEEEccCCC-------eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEec--------
Q 038802 237 IATAG-G-------NSVKIWDLIGGG-------KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVAL-------- 293 (532)
Q Consensus 237 l~~~~-d-------~~i~iwd~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~-------- 293 (532)
++.|+ + +.+.+||+.+.. ..+.........-.+++...+ +.+++.||.
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~---------~~iyv~GG~~~~~~~~~ 624 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITP---------RKLLIVGGTSPSGLFDR 624 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEET---------TEEEEECCBCSSCCCCT
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCC---------CEEEEECCccCCCCCCC
Confidence 66665 2 358899988763 112221111111112233332 346666664
Q ss_pred CCeEEEEECCCceEEEeeecCCCe----------eEEEEecCCCEEEEEec
Q 038802 294 DGYMKVFDYGKMKVTHSMRFPAPL----------MSVAFSPDCMTRVIGTS 334 (532)
Q Consensus 294 dg~i~iwd~~~~~~~~~~~~~~~v----------~~~~~s~~~~~l~~g~~ 334 (532)
...+.+||+.+.+-. ....+... .++...++|+.++.|+.
T Consensus 625 ~~~v~~yd~~t~~W~-~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 625 TNSIISLDPLSETLT-SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp TTSEEEEETTTTEEE-ECCCCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred CCeEEEEECCCCeEE-EeeccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence 345999999887654 22222111 23444456677777764
No 335
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.39 E-value=0.2 Score=43.08 Aligned_cols=170 Identities=11% Similarity=0.031 Sum_probs=91.0
Q ss_pred CCeEEEEEeCCeEEEEeCCCce------EEEEeec-cCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCce------EE
Q 038802 63 TSHLFAATHSASLTLFSSQTLE------KHSAISS-FKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTP------LR 129 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~~------~~~~~~~-~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~------~~ 129 (532)
...|++...| +++.=...++. ....+.. -=..+.+++|+|+|.+.++ .+|.++-.+..+... -.
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCE
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccccc
Confidence 4456666666 66555444433 1122211 0246779999999986666 577766666544211 11
Q ss_pred Eec--CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeE-------EEeccCCCCceEEEEEeCCCCCEEEEEeCC
Q 038802 130 RLK--SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESV-------VLDLFGHKDYVRCGDCSPVNGDMFVTGSYD 200 (532)
Q Consensus 130 ~~~--~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~-------~~~~~~~~~~v~~i~~~~~~~~~l~s~s~d 200 (532)
.+- +-.. ..++.|.| ++.+.++ .||.|+-++-.+... ...-..-=..+..+.+.| ++.+.+.. |
T Consensus 81 ~IG~~Gw~~-F~a~~fD~-~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--d 153 (236)
T 1tl2_A 81 KIGNGGWNQ-FQFLFFDP-NGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--G 153 (236)
T ss_dssp EEECSCGGG-CSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--T
T ss_pred Eeccccccc-ceEEEECC-CCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe--C
Confidence 111 1111 36788888 7776666 569998887643211 000111124578999999 88877766 7
Q ss_pred CeEEEEEcccCCc-----eeEEEe-cCCCcEEEEEEecCCCEEEEEcCC
Q 038802 201 HTVKLWDVRVENS-----KSVMEV-NHGKPIEDVMFLPSGGLIATAGGN 243 (532)
Q Consensus 201 g~i~iwd~~~~~~-----~~~~~~-~~~~~v~~i~~~~~~~~l~~~~d~ 243 (532)
+.++-+...+... ...... ..-....-+.|.+++.+.++. ++
T Consensus 154 g~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~-~g 201 (236)
T 1tl2_A 154 QQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ-GG 201 (236)
T ss_dssp TEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE-TT
T ss_pred CcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe-CC
Confidence 7754332221110 011111 222233446688888777766 55
No 336
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.37 E-value=0.14 Score=48.42 Aligned_cols=232 Identities=11% Similarity=0.031 Sum_probs=110.6
Q ss_pred CCCeEEEEEe-CCeEEEEeCCC--ceE--EEEee-ccCceeEEEEEccCCCEEEEEcC-C---------CCEEEEECCCC
Q 038802 62 TTSHLFAATH-SASLTLFSSQT--LEK--HSAIS-SFKDVVTCSSFRPDGSLLAASDL-S---------GLIQVFDVKSR 125 (532)
Q Consensus 62 ~~~~l~~~~~-d~~v~i~~~~~--~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~g~~-d---------g~i~iwd~~~~ 125 (532)
++..++.|+. ...+.+||..+ .+- +..+. .......++.+ ++++++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 4555555543 45788999863 221 11122 11111222222 6777777765 2 46899998876
Q ss_pred ceEEEecCC---CCCEEEEEeecCCCcEEEEEeCC---------------------------------------CeEEEE
Q 038802 126 TPLRRLKSH---TRPVRFVKYPFLDKLHLVSGGDD---------------------------------------GIVKFW 163 (532)
Q Consensus 126 ~~~~~~~~h---~~~i~~~~~~~~~~~~l~s~s~d---------------------------------------g~i~iw 163 (532)
+-...-... .....++. . ++.+++.|+.+ ..+.+|
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~--~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 173 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV--H-NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF 173 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE--E-TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE
T ss_pred cEEECCCCCCcccccceEEE--E-CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEE
Confidence 533221111 11222233 2 77888888765 478999
Q ss_pred ECCCCeEEE--eccCCCCceEEEEEeCCCCCEEEEEeCC------CeEEEEEc--ccCCceeEEEecCCCc-EEEEEEec
Q 038802 164 DVAGESVVL--DLFGHKDYVRCGDCSPVNGDMFVTGSYD------HTVKLWDV--RVENSKSVMEVNHGKP-IEDVMFLP 232 (532)
Q Consensus 164 d~~~~~~~~--~~~~~~~~v~~i~~~~~~~~~l~s~s~d------g~i~iwd~--~~~~~~~~~~~~~~~~-v~~i~~~~ 232 (532)
|..+.+-.. .+......-.+++.. ++.+++.|+.+ ..+..||+ .+..-........... ....+...
T Consensus 174 d~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~ 251 (357)
T 2uvk_A 174 DPSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGIS 251 (357)
T ss_dssp ETTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEE
T ss_pred eCCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEE
Confidence 998765322 222111111233333 56677777642 34777776 3321111111111111 11112233
Q ss_pred CCCEEEEEc-C----------------------CeEEEEEccCCC-eeeEEccCCCcceEEEEEeccCCCCCccccccEE
Q 038802 233 SGGLIATAG-G----------------------NSVKIWDLIGGG-KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRI 288 (532)
Q Consensus 233 ~~~~l~~~~-d----------------------~~i~iwd~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l 288 (532)
++.+++.|+ + ..+.+||+.+.. ..+..+......-.++. .+ +.++
T Consensus 252 ~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~---------~~i~ 320 (357)
T 2uvk_A 252 NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLP--WN---------NSLL 320 (357)
T ss_dssp TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEE--ET---------TEEE
T ss_pred CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEE--eC---------CEEE
Confidence 666776665 2 247788887542 23333332222222222 22 4677
Q ss_pred EEEecCC------eEEEEECCCceEEEee
Q 038802 289 LSVALDG------YMKVFDYGKMKVTHSM 311 (532)
Q Consensus 289 ~s~~~dg------~i~iwd~~~~~~~~~~ 311 (532)
+.|+.++ .|.++++++++.+...
T Consensus 321 v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 321 IIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred EEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 7777643 3556677776655443
No 337
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.37 E-value=0.67 Score=43.47 Aligned_cols=192 Identities=13% Similarity=0.156 Sum_probs=112.3
Q ss_pred CeeEEEEcCCCCeEEEEE-------------eCCeEEEEeCCC--ceEE-EEeec-----cCceeEEEEEcc--CCC-EE
Q 038802 53 SINSIVFSPTTSHLFAAT-------------HSASLTLFSSQT--LEKH-SAISS-----FKDVVTCSSFRP--DGS-LL 108 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~~~~-------------~d~~v~i~~~~~--~~~~-~~~~~-----~~~~v~~~~~~~--~~~-~l 108 (532)
..-.+...|+|. +++++ .+|.|.++|..+ ++.. ..+.+ ..-....+.+.+ ++. +|
T Consensus 51 G~EDi~~~~~G~-~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECTTSE-EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcCCCe-EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 445677788875 44444 689999999873 2221 12222 123567777766 353 44
Q ss_pred EEE-cC--CCCEEEEECCCCc----eEEEecCC-CCCEEEEEeecCCCcEEEEEe-----------------CCCeEEEE
Q 038802 109 AAS-DL--SGLIQVFDVKSRT----PLRRLKSH-TRPVRFVKYPFLDKLHLVSGG-----------------DDGIVKFW 163 (532)
Q Consensus 109 ~~g-~~--dg~i~iwd~~~~~----~~~~~~~h-~~~i~~~~~~~~~~~~l~s~s-----------------~dg~i~iw 163 (532)
+++ .. +.+|.+|++.... .+..+.+. -...+++.+.+ ++.+.++.. ..|.|..+
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 444 22 4678888775432 23334332 24578999998 777666643 12556666
Q ss_pred ECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEE-eCCCeEEEEEcccC-CceeEEEecCCCcEEEEEEec-CCCEEEEE
Q 038802 164 DVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTG-SYDHTVKLWDVRVE-NSKSVMEVNHGKPIEDVMFLP-SGGLIATA 240 (532)
Q Consensus 164 d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~-s~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~ 240 (532)
|.. +.. .+...-..-+.++|+| +++.++.+ +..+.|..||+... .......+........+++.+ +|++.+++
T Consensus 209 d~~--~~~-~~~~~l~~pNGia~sp-Dg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 209 SPN--DVR-VVAEGFDFANGINISP-DGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp CTT--CCE-EEEEEESSEEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred ECC--eEE-EeecCCcccCcceECC-CCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEe
Confidence 653 222 2222234467899999 87766554 45788999998642 222111223356678899999 59988866
Q ss_pred c-C-CeEEEEEc
Q 038802 241 G-G-NSVKIWDL 250 (532)
Q Consensus 241 ~-d-~~i~iwd~ 250 (532)
. + +.|..||.
T Consensus 285 ~~~g~~v~~~~P 296 (355)
T 3sre_A 285 HPNGMRIFFYDA 296 (355)
T ss_dssp ESCHHHHHSCCT
T ss_pred cCCceEEEEECC
Confidence 5 4 35555554
No 338
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.36 E-value=0.86 Score=44.56 Aligned_cols=104 Identities=12% Similarity=0.074 Sum_probs=61.3
Q ss_pred ceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceE--EEecC------CCCCEEEEEeecC---CCcEEEEEeC------
Q 038802 94 DVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPL--RRLKS------HTRPVRFVKYPFL---DKLHLVSGGD------ 156 (532)
Q Consensus 94 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~--~~~~~------h~~~i~~~~~~~~---~~~~l~s~s~------ 156 (532)
.....++|.|+|+++++-...+.|.+++..++... ..+.. ..+....++|+|+ ++.+.++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 45679999999997777654457888876555432 22221 2456789999983 3443343332
Q ss_pred ------CCeEEEEECCCC-------eEEEe-cc-CCCCceEEEEEeCCCCCEEEEEe
Q 038802 157 ------DGIVKFWDVAGE-------SVVLD-LF-GHKDYVRCGDCSPVNGDMFVTGS 198 (532)
Q Consensus 157 ------dg~i~iwd~~~~-------~~~~~-~~-~~~~~v~~i~~~~~~~~~l~s~s 198 (532)
...|..|+.... +.+.. +. ........++|.| ++.+.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEEC
Confidence 235666665321 11221 21 1123467899999 888777654
No 339
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=96.30 E-value=0.82 Score=43.76 Aligned_cols=206 Identities=9% Similarity=-0.044 Sum_probs=99.0
Q ss_pred eEEEEEeCCeEEEEeCCC-ceEEEEe--eccCceeEEEEEcc-CCCEEEEEcCCC----CEEEEECCCCceEEEecC---
Q 038802 65 HLFAATHSASLTLFSSQT-LEKHSAI--SSFKDVVTCSSFRP-DGSLLAASDLSG----LIQVFDVKSRTPLRRLKS--- 133 (532)
Q Consensus 65 ~l~~~~~d~~v~i~~~~~-~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~g~~dg----~i~iwd~~~~~~~~~~~~--- 133 (532)
.|++|+..| +.+++... +..-..+ ......|.++++.| +...|.+++..| .|...+ +.++.-..+..
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~ 101 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPA 101 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCC
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCcccc
Confidence 677788766 55555332 2222211 12246799999998 333444444344 343322 22332222211
Q ss_pred -----------CCCCEEEEEeecCC-CcEEEEEeCCCeEEEEECCCCeEEEecc-------------------CCCCceE
Q 038802 134 -----------HTRPVRFVKYPFLD-KLHLVSGGDDGIVKFWDVAGESVVLDLF-------------------GHKDYVR 182 (532)
Q Consensus 134 -----------h~~~i~~~~~~~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------------------~~~~~v~ 182 (532)
....|.++++.|.+ ...+..++..+.|...+-. ++.-..+. .....+.
T Consensus 102 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~ 180 (394)
T 3b7f_A 102 FNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMH 180 (394)
T ss_dssp CCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----CCCCEEE
T ss_pred CCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCCCCCcee
Confidence 11247788888744 5667777766766655422 22211111 1123578
Q ss_pred EEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEE-ec----------CCCcEEEEEEecC-CCEEEEEcCCeEEEEEc
Q 038802 183 CGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVME-VN----------HGKPIEDVMFLPS-GGLIATAGGNSVKIWDL 250 (532)
Q Consensus 183 ~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~----------~~~~v~~i~~~~~-~~~l~~~~d~~i~iwd~ 250 (532)
++.+.|.+...++.++.++.|...+-....-..... .. ....+.++.++|. ...+..+..+.|...+
T Consensus 181 ~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~- 259 (394)
T 3b7f_A 181 SILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMD- 259 (394)
T ss_dssp EEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEE-
T ss_pred EEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeC-
Confidence 899987445555556555544443211111111100 00 0134889999985 3455555555554444
Q ss_pred cCCCeeeEEccC--CC---cceEEEEEecc
Q 038802 251 IGGGKMVYSMES--HN---KTVTSVCVGRV 275 (532)
Q Consensus 251 ~~~~~~~~~~~~--~~---~~i~~~~~~~~ 275 (532)
.++..-..+.. .. ..+.++.+.|.
T Consensus 260 -D~G~tW~~~~~~l~~~~~~~~~~i~~~p~ 288 (394)
T 3b7f_A 260 -RREGVWKRIGDAMPREVGDIGFPIVVHQR 288 (394)
T ss_dssp -TTTTEEECGGGGSCTTTCSCEEEEEECSS
T ss_pred -CCCCcceECCCCCCCCCccceEEEEECCC
Confidence 22222222221 11 23567777764
No 340
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.21 E-value=0.8 Score=42.76 Aligned_cols=221 Identities=15% Similarity=0.155 Sum_probs=121.0
Q ss_pred ccccCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEE--Ee----eccCceeEEEEEccC---CCEEEEE---cCCCC
Q 038802 49 GLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHS--AI----SSFKDVVTCSSFRPD---GSLLAAS---DLSGL 116 (532)
Q Consensus 49 ~h~~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~--~~----~~~~~~v~~~~~~~~---~~~l~~g---~~dg~ 116 (532)
..-.....|+|.|+|..+++--..|.|++++..++.... .+ .........++|+|+ +.+|++. ..++.
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 334466899999999855443338999999876554321 11 122457889999995 3445443 23455
Q ss_pred EEEEECCCC----------ceE-EEec---CCCCCEEEEEeecCCCcEEEEEeC-------------CCeEEEEECCCC-
Q 038802 117 IQVFDVKSR----------TPL-RRLK---SHTRPVRFVKYPFLDKLHLVSGGD-------------DGIVKFWDVAGE- 168 (532)
Q Consensus 117 i~iwd~~~~----------~~~-~~~~---~h~~~i~~~~~~~~~~~~l~s~s~-------------dg~i~iwd~~~~- 168 (532)
|.-|....+ +.+ ..+. .|. ...+.|.| ++.+.++.+. .|.|.-.+....
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~--g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHN--GGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCC--CCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCcc--CccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 666665441 111 1222 233 35689999 7876666542 355655565432
Q ss_pred --------eEEEeccCCCCceEEEEEeCCCCCEEEEEe-CCCeEEEEEcccCC----------------ceeEEEecCC-
Q 038802 169 --------SVVLDLFGHKDYVRCGDCSPVNGDMFVTGS-YDHTVKLWDVRVEN----------------SKSVMEVNHG- 222 (532)
Q Consensus 169 --------~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s-~dg~i~iwd~~~~~----------------~~~~~~~~~~- 222 (532)
..+. -.+|.++ ..++|+| ++.++++-. .|+.=.|--+..+. ........+.
T Consensus 186 p~~nPf~~~~i~-a~G~RNp-~Gla~dp-~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~ 262 (347)
T 3das_A 186 APGNPFPGSPVY-SYGHRNV-QGLAWDD-KQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDE 262 (347)
T ss_dssp CTTCSSTTCCEE-EBCCSBC-CEEEECT-TCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTT
T ss_pred cCCCCCCCCeEE-eeCCCCc-ceEEECC-CCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCC
Confidence 1121 1355544 4789999 777666532 23222222222111 0112222222
Q ss_pred CcEEEEEEecCCCEEEEEc-CCeEEEEEccCCC---eeeEEccCCCcceEEEEEeccC
Q 038802 223 KPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGG---KMVYSMESHNKTVTSVCVGRVG 276 (532)
Q Consensus 223 ~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~---~~~~~~~~~~~~i~~~~~~~~~ 276 (532)
.....++|. +|.++...- .+.|....+...+ .....+.+....+..+...|+|
T Consensus 263 ~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG 319 (347)
T 3das_A 263 ASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGD 319 (347)
T ss_dssp CCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETT
T ss_pred CCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCC
Confidence 355677777 456665555 5667666765442 1223344445678889999885
No 341
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=96.18 E-value=0.94 Score=43.32 Aligned_cols=152 Identities=12% Similarity=-0.013 Sum_probs=79.1
Q ss_pred ccCeeEEEEcC-CCCeEEEEEeCC----eEEEEeCCCceEEEEeec--------------cCceeEEEEEcc-C-CCEEE
Q 038802 51 VSSINSIVFSP-TTSHLFAATHSA----SLTLFSSQTLEKHSAISS--------------FKDVVTCSSFRP-D-GSLLA 109 (532)
Q Consensus 51 ~~~V~~i~~sp-~~~~l~~~~~d~----~v~i~~~~~~~~~~~~~~--------------~~~~v~~~~~~~-~-~~~l~ 109 (532)
...|.+|++.| +...+.+++..| .|...+ +.++.-..+.. ....|.++++.| + ...+.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 34699999998 333566666655 454443 22322222211 113578899987 2 45566
Q ss_pred EEcCCCCEEEEECCCCceEEEec---C----------------CCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeE
Q 038802 110 ASDLSGLIQVFDVKSRTPLRRLK---S----------------HTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESV 170 (532)
Q Consensus 110 ~g~~dg~i~iwd~~~~~~~~~~~---~----------------h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~ 170 (532)
+++..+.|...+ ..++.-..+. . ....+.++.++|.+...++.+..++.|...+- .++.
T Consensus 133 ~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~t 210 (394)
T 3b7f_A 133 AGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTD-AGTD 210 (394)
T ss_dssp EEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESS-TTSS
T ss_pred EEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECC-CCCC
Confidence 665555554432 2222222221 0 12357889998744555666655555554432 2222
Q ss_pred EEeccC-----C--------CCceEEEEEeCCCCCEEEEEeCCCeEEEE
Q 038802 171 VLDLFG-----H--------KDYVRCGDCSPVNGDMFVTGSYDHTVKLW 206 (532)
Q Consensus 171 ~~~~~~-----~--------~~~v~~i~~~~~~~~~l~s~s~dg~i~iw 206 (532)
-..+.. + ...+.++.+.|.++..++.++..+ |...
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s 258 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRM 258 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEE
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEe
Confidence 222210 0 134888999985567777777655 4433
No 342
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.13 E-value=0.33 Score=53.55 Aligned_cols=237 Identities=12% Similarity=0.135 Sum_probs=131.2
Q ss_pred EEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC-CceEEEecCC
Q 038802 56 SIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS-RTPLRRLKSH 134 (532)
Q Consensus 56 ~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~h 134 (532)
+.-.+|..+.+|.=+ ..++.|||+++...+....-. .+|.-=.|-.+ +.|+..+ +..|+-|++.. ..+.+.+..|
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~-e~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred hhccCCCcceEEEec-CCeEEEeehHHhhhhcccccC-CCceEEEecCC-CeeEEEc-CCeEEEeccCCCCccHHHHhcc
Confidence 455678777666554 789999999987777666553 34555455543 3455444 56799999964 2444444444
Q ss_pred ----CCCEEEEEeecCCCcEEEEEe-------CCCeEEEEECCCCeEEEeccCCCCceEEEEEe--CCCCCEEEEEeC--
Q 038802 135 ----TRPVRFVKYPFLDKLHLVSGG-------DDGIVKFWDVAGESVVLDLFGHKDYVRCGDCS--PVNGDMFVTGSY-- 199 (532)
Q Consensus 135 ----~~~i~~~~~~~~~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~--~~~~~~l~s~s~-- 199 (532)
...|..-..++ +.++++..| -.|.+.+|..+.+ ..+.+.||......+... +....+++.+..
T Consensus 146 ~~L~~~QIinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~ 223 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (1630)
T ss_pred hhcccCeeEEeeeCC-CCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecC
Confidence 34565556666 556555433 3578889988643 344556666544333332 111223333322
Q ss_pred -CCeEEEEEcccC-CceeEE-------EecC---CCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCCeeeEEccCCCcc
Q 038802 200 -DHTVKLWDVRVE-NSKSVM-------EVNH---GKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGGKMVYSMESHNKT 266 (532)
Q Consensus 200 -dg~i~iwd~~~~-~~~~~~-------~~~~---~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~ 266 (532)
.+.++|-++... .....+ .++. ..-..++..++...++...+ -|.+.+||+.++ .++..-.-...+
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~-~~i~~~ris~~~ 302 (1630)
T 1xi4_A 224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG-TCIYMNRISGET 302 (1630)
T ss_pred CCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccc-hhhhhccccCCc
Confidence 268888888543 111111 1111 12224567777666666656 899999999988 555444434444
Q ss_pred eEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCceEE
Q 038802 267 VTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVT 308 (532)
Q Consensus 267 i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (532)
|...+..... .=++.....|.|.-..+.....+
T Consensus 303 iF~~~~~~~~---------~g~~~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 303 IFVTAPHEAT---------AGIIGVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred eEEeccCCCC---------CceEEEcCCceEEEEEEccchhh
Confidence 4433333221 12444445666555555444433
No 343
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.08 E-value=0.87 Score=41.99 Aligned_cols=174 Identities=15% Similarity=0.111 Sum_probs=88.2
Q ss_pred eEEEEeCCCceEEEE-eeccCceeEEEEEccCCCEEEEEcC----CC-------CEEEEECCCCceEEE--ecCCCCCEE
Q 038802 74 SLTLFSSQTLEKHSA-ISSFKDVVTCSSFRPDGSLLAASDL----SG-------LIQVFDVKSRTPLRR--LKSHTRPVR 139 (532)
Q Consensus 74 ~v~i~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~----dg-------~i~iwd~~~~~~~~~--~~~h~~~i~ 139 (532)
.+..||..+.+-... +..............++.+++.|+. ++ .+.+||..+.+-... +........
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 478899887664431 1111112222333457788888873 12 177888876653322 111111112
Q ss_pred EEEeecCCCcEEEEEeCC-------CeEEEEECCCCeEEEeccCCCC-ceEEEEEeCCCCCEEEEEeCC------CeEEE
Q 038802 140 FVKYPFLDKLHLVSGGDD-------GIVKFWDVAGESVVLDLFGHKD-YVRCGDCSPVNGDMFVTGSYD------HTVKL 205 (532)
Q Consensus 140 ~~~~~~~~~~~l~s~s~d-------g~i~iwd~~~~~~~~~~~~~~~-~v~~i~~~~~~~~~l~s~s~d------g~i~i 205 (532)
.+.+ ++..++.|+.+ ..+.+||..+.+-...-..... .-.+++. . ++.+++.|+.+ ..+.+
T Consensus 105 ~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~ 179 (318)
T 2woz_A 105 LGEV---DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-H-NGMIYCLGGKTDDKKCTNRVFI 179 (318)
T ss_dssp EEEE---TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-E-TTEEEEECCEESSSCBCCCEEE
T ss_pred eEEE---CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-E-CCEEEEEcCCCCCCCccceEEE
Confidence 2222 66777777754 3588899887653322111110 0012222 2 56777777642 35889
Q ss_pred EEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C-----CeEEEEEccCC
Q 038802 206 WDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G-----NSVKIWDLIGG 253 (532)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d-----~~i~iwd~~~~ 253 (532)
||+.+.+-...........-.+++.. ++.+++.|+ + ..+.+||+.+.
T Consensus 180 yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 180 YNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred EcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCC
Confidence 99877543322222222222233332 567666665 2 35778888765
No 344
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.06 E-value=0.14 Score=44.07 Aligned_cols=140 Identities=11% Similarity=-0.042 Sum_probs=78.7
Q ss_pred CeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceE------EEEeec-cCceeEEEEEccCCCEEEEEcCCCCEEEEECCCC
Q 038802 53 SINSIVFSPTTSHLFAATHSASLTLFSSQTLEK------HSAISS-FKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSR 125 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~------~~~~~~-~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 125 (532)
.+.+++|+|+|.+.++ .+|.++-.+..+... -..+-. --....++.|.|+|.+.++ .||.|+-++-.+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 6779999999875444 778877777654211 111110 0112478899999987777 4698887775332
Q ss_pred ce-------EEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCe-------EEEeccCCCCceEEEEEeCCCC
Q 038802 126 TP-------LRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGES-------VVLDLFGHKDYVRCGDCSPVNG 191 (532)
Q Consensus 126 ~~-------~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~i~~~~~~~ 191 (532)
.. ...-..-=..+..+.|.| ++.+.+.. |+.+.-+...++. ....-...-..-+-+.|.+ ++
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~-~G 193 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSS-VG 193 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECT-TS
T ss_pred CCCceeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECC-CC
Confidence 11 111111124678999998 88755555 7776544333211 0011112223344466777 66
Q ss_pred CEEEEEeCCCe
Q 038802 192 DMFVTGSYDHT 202 (532)
Q Consensus 192 ~~l~s~s~dg~ 202 (532)
.+.++. +|.
T Consensus 194 ~l~~v~--~g~ 202 (236)
T 1tl2_A 194 TLFGVQ--GGK 202 (236)
T ss_dssp CEEEEE--TTE
T ss_pred cEEEEe--CCe
Confidence 666555 663
No 345
>1k8k_G P16, ARP2/3 complex 16 kDa subunit, P16-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: a.118.13.1 PDB: 1tyq_G* 1u2v_G* 2p9i_G* 2p9k_G* 2p9l_G 2p9n_G* 2p9p_G* 2p9s_G* 2p9u_G* 3rse_G 3dxm_G* 3dxk_G
Probab=95.81 E-value=0.026 Score=44.65 Aligned_cols=87 Identities=26% Similarity=0.353 Sum_probs=65.0
Q ss_pred ccchhHHHhhcccchHHHHHHhhCC-----CC-C--h----hHHHHHHHHHhhchHHHHhcCCChHhHHHHHHHHHhccC
Q 038802 398 LKLGEHDKLLKKFRHKEALVSVLNG-----KN-P--E----NVVAVMEELVARKKLMKCVSNLDNEELGLLLSFMQKHST 465 (532)
Q Consensus 398 ~k~~~~~~~l~~~~~~~al~~al~~-----~~-~--~----~~~~~~~~l~~~~~l~~~~~~~~~~~~~~ll~~~~~~~~ 465 (532)
.+.++.+.+|++++..+||..+|.. ++ . + .++.+|..+. ...+..+++.++.++..-|++||.+-+.
T Consensus 37 p~~~qv~~lL~~g~~~~ALk~~L~~pP~~~k~q~~K~~~~~~Vl~VL~siK-~sdI~~~v~~L~~e~~D~LMKYiYkGm~ 115 (151)
T 1k8k_G 37 PDEGEVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFK-ANDIEKAVQSLDKNGVDLLMKYIYKGFE 115 (151)
T ss_dssp CCHHHHHHHHHTTCHHHHHHHHTSSCCSSCSCHHHHHHHHHHHHHHHHHSC-GGGHHHHHHTSCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHCCCHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHHcc-HHHHHHHHHHhChhhhhHHHHHHHHhhc
Confidence 3578899999999999999999974 11 1 1 2233333222 2579999999999999999999999998
Q ss_pred CCCc--hHHHHHHHHHHHHhcc
Q 038802 466 VPRY--SGLLIGLMEKVLEMRA 485 (532)
Q Consensus 466 ~~~~--~~~~~~~~~~il~~~~ 485 (532)
.|.. +.+++.|-++++..-+
T Consensus 116 ~~~~~~~~~LL~WHEKl~~~~G 137 (151)
T 1k8k_G 116 SPSDNSSAVLLQWHEKALAAGG 137 (151)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHH
T ss_pred CcCCCcchHHHHHHHHHHHhcC
Confidence 7643 4677777777776533
No 346
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.80 E-value=1.1 Score=40.98 Aligned_cols=176 Identities=11% Similarity=0.075 Sum_probs=99.4
Q ss_pred EEEEcCCCCeEEEEEeC--------------CeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEc----CCCCE
Q 038802 56 SIVFSPTTSHLFAATHS--------------ASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASD----LSGLI 117 (532)
Q Consensus 56 ~i~~sp~~~~l~~~~~d--------------~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~----~dg~i 117 (532)
+--+++++.+++.+... ..|+..++...+... +.. .. +..|++++++|+-.. .+..|
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 34568889988887653 367777777654332 222 22 236788888888665 23456
Q ss_pred EEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeC-CCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEE
Q 038802 118 QVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGD-DGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVT 196 (532)
Q Consensus 118 ~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s 196 (532)
...++.... ...+..+.. ..|++ ++..|+-.+. ...|.+-++..+.....+.+ ... ..++| ++..|+-
T Consensus 132 y~~~~dGs~-~~~lt~~~~----~~~~~-~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P-~g~~iy~ 200 (302)
T 3s25_A 132 YRIRIDGEE-KKKIKNHYL----FTCNT-SDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCY-KPVVL-DDTNVYY 200 (302)
T ss_dssp EEEETTSCC-CEEEESSCC----CCSEE-ETTEEEEECTTTCCEEEEETTTTEEEEEECS---CEE-EEEEE-ETTEEEE
T ss_pred EEEECCCCC-eEEEeCCCc----eEeeE-ECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Ccc-ceeee-cCCEEEE
Confidence 666665433 344443432 34566 5555554444 67898889887665443332 222 33568 6776665
Q ss_pred EeCC--CeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc---CCeEEEEEccCC
Q 038802 197 GSYD--HTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG---GNSVKIWDLIGG 253 (532)
Q Consensus 197 ~s~d--g~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~---d~~i~iwd~~~~ 253 (532)
...+ ..|..-++...... .+. ...+ ..|+|++..|.-+. .+.|..-++...
T Consensus 201 t~~~~~~~I~~~~ldG~~~~-~Lt---~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 201 MDVNRDNAIVHVNINNPNPV-VLT---EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp EEGGGTTEEEEECSSSCCCE-ECS---CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred EEcCCCcEEEEEECCCCCeE-EEe---CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 5443 35666666543322 221 2233 34778888877653 346666666543
No 347
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.75 E-value=1.2 Score=40.85 Aligned_cols=238 Identities=6% Similarity=-0.030 Sum_probs=123.7
Q ss_pred CCCCeEEEEEe--CCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCC--------------CCEEEEECCC
Q 038802 61 PTTSHLFAATH--SASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLS--------------GLIQVFDVKS 124 (532)
Q Consensus 61 p~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d--------------g~i~iwd~~~ 124 (532)
+++.++..... ++.|+..+.+... ...+.. +. +--++++|.+|+-+... ..|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~--~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSN--DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEE--EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccC--Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 46777776653 5667777755433 333332 22 34568899998876532 3577777776
Q ss_pred CceEEEecCCCCCEEEEEeecCCCcEEEEEe----CCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeC-
Q 038802 125 RTPLRRLKSHTRPVRFVKYPFLDKLHLVSGG----DDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSY- 199 (532)
Q Consensus 125 ~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s----~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~- 199 (532)
++...... .. +..|++ +++.|+-.. .+..|...++..... ..+..+.. ..++| +++.|+-.+.
T Consensus 98 ~~~~~l~~---~~--~~~~s~-~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~lt~~~~----~~~~~-~g~~iy~t~~g 165 (302)
T 3s25_A 98 HGSTVLDP---DP--CIYASL-IGNYIYYLHYDTQTATSLYRIRIDGEEK-KKIKNHYL----FTCNT-SDRYFYYNNPK 165 (302)
T ss_dssp CCCEEEEC---SC--EEEEEE-ETTEEEEEEESSSSCEEEEEEETTSCCC-EEEESSCC----CCSEE-ETTEEEEECTT
T ss_pred CcceEeec---CC--ccEEEE-eCCEEEEEeecCCCCceEEEEECCCCCe-EEEeCCCc----eEeeE-ECCEEEEEeCC
Confidence 54333222 12 225666 666666554 345666667764332 23333322 34566 5566654444
Q ss_pred CCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc-C--CeEEEEEccCCCeeeEEccCCCcceEEEEEeccC
Q 038802 200 DHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-G--NSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVG 276 (532)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d--~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~ 276 (532)
...|...++.......+ .. .... ..++|++.+|+-.. + ..|..-++... ....+.. ..+ ..++|+
T Consensus 166 ~~~Iy~~~l~g~~~~~l--~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~--~~~~Lt~--~~~--~~~~~~- 233 (302)
T 3s25_A 166 NGQLYRYDTASQSEALF--YD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP--NPVVLTE--ANI--EHYNVY- 233 (302)
T ss_dssp TCCEEEEETTTTEEEEE--EC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSC--CCEECSC--SCE--EEEEEE-
T ss_pred CceEEEEECCCCCEEEE--eC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCC--CeEEEeC--CCc--ceEEEC-
Confidence 56788888765433322 22 2222 34668888877665 3 35666666544 2333332 223 336777
Q ss_pred CCCCccccccEEEEE--ecCCeEEEEECCCceEEEeeecCCCeeEEEEecCCCEEEEEe-cCCcEE
Q 038802 277 NESGEEAMQYRILSV--ALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGT-SNGTIF 339 (532)
Q Consensus 277 ~~~~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~-~dg~i~ 339 (532)
+.+|+-+ +..+.|..-++........... .+. ++++.+.+|+-.. ..+.|.
T Consensus 234 --------g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~--~~~--~i~i~~d~Iy~td~~~~~i~ 287 (302)
T 3s25_A 234 --------GSLIFYQRGGDNPALCVVKNDGTGFKELAKG--EFC--NINVTSQYVYFTDFVSNKEY 287 (302)
T ss_dssp --------TTEEEEEECSSSCEEEEEETTSCCCEEEEES--CEE--EEEECSSEEEEEETTTCCEE
T ss_pred --------CCEEEEEECCCCcEEEEEECCCCccEEeeCC--ccc--eEEEeCCEEEEEECCCCeEE
Confidence 3455543 2345677777665332222221 233 3455566665544 334443
No 348
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.71 E-value=1.7 Score=42.44 Aligned_cols=104 Identities=12% Similarity=0.172 Sum_probs=60.8
Q ss_pred ccCeeEEEEcCCCCeEEEEEeC-CeEEEEeCCCceEEE--Eeec------cCceeEEEEEccC---CCEEEEEcC-----
Q 038802 51 VSSINSIVFSPTTSHLFAATHS-ASLTLFSSQTLEKHS--AISS------FKDVVTCSSFRPD---GSLLAASDL----- 113 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d-~~v~i~~~~~~~~~~--~~~~------~~~~v~~~~~~~~---~~~l~~g~~----- 113 (532)
-....+|+|.|+|++++ +... +.|++++..++.... .+.. .......++|+|+ +..|+++..
T Consensus 26 l~~P~~~a~~pdG~l~V-~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWL-TERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTSCEEE-EETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEE-EEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 34567999999998555 4555 479999865554322 2221 2356779999995 555554432
Q ss_pred --------CCCEEEEECCCC-------ceEE-EecC-CCCCEEEEEeecCCCcEEEEEeC
Q 038802 114 --------SGLIQVFDVKSR-------TPLR-RLKS-HTRPVRFVKYPFLDKLHLVSGGD 156 (532)
Q Consensus 114 --------dg~i~iwd~~~~-------~~~~-~~~~-h~~~i~~~~~~~~~~~~l~s~s~ 156 (532)
...|.-|+.... +.+. .+.. .......++|.| ++.+.++.+.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd 163 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGD 163 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECC
Confidence 134555655322 1111 1221 123468999999 7777666543
No 349
>3dwl_G Actin-related protein 2/3 complex subunit 5; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.45 E-value=0.039 Score=43.63 Aligned_cols=85 Identities=19% Similarity=0.287 Sum_probs=65.5
Q ss_pred chhHHHhhcccchHHHHHHhhCCCCC---h-------hHHHHHHHHHh--hchHHHHhcCCChHhHHHHHHHHHhccCCC
Q 038802 400 LGEHDKLLKKFRHKEALVSVLNGKNP---E-------NVVAVMEELVA--RKKLMKCVSNLDNEELGLLLSFMQKHSTVP 467 (532)
Q Consensus 400 ~~~~~~~l~~~~~~~al~~al~~~~~---~-------~~~~~~~~l~~--~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~ 467 (532)
..+.+.+|++++..+||..||.. -| + ....+++-|.. ...+..+++.++.++..-|++||.+-|..+
T Consensus 40 ~~qvr~lL~~g~~~~ALk~aL~~-pP~~~~~~~~K~~~~~~Vl~vL~siK~sdI~~~v~~L~~~~~D~LMKYiYkGm~~~ 118 (152)
T 3dwl_G 40 IPQARSAIQTGNALQGLKTLLSY-VPYGNDVQEVRTQYLNAFVDVLSNIRAADIPAFVKECSTEEIDNIVNFIYRGLANP 118 (152)
T ss_dssp HHHHHHHHHHSCCHHHHHHHTSS-CCCSCSCHHHHHHHHHHHHHHHHTSCGGGHHHHHHHSCHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHCCCHHHHHHHHHhC-CCCCCChHHHHHHHHHHHHHHHHHccHHHHHHHHHHhCHHHHHHHHHHHHHhccCc
Confidence 57889999999999999999975 22 1 22333333322 257999999999999999999999999877
Q ss_pred --CchHHHHHHHHHHHHhcc
Q 038802 468 --RYSGLLIGLMEKVLEMRA 485 (532)
Q Consensus 468 --~~~~~~~~~~~~il~~~~ 485 (532)
..+.+++.|=++++..-+
T Consensus 119 ~~~~~~~LL~WHEKl~e~~G 138 (152)
T 3dwl_G 119 QAYNSSVLLNWHEKVVEISG 138 (152)
T ss_dssp ---CCSHHHHHHHHHHHTTC
T ss_pred cccccHHHHHHHHHHHHHcC
Confidence 567888889888887654
No 350
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.32 E-value=1.8 Score=40.30 Aligned_cols=229 Identities=11% Similarity=0.002 Sum_probs=124.3
Q ss_pred CceeEEEEEccCCCEEEEEcCCCCEEEEECCCCce--EEEe----cCCCCCEEEEEeecC---CCcEEEEE--eCCCeEE
Q 038802 93 KDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTP--LRRL----KSHTRPVRFVKYPFL---DKLHLVSG--GDDGIVK 161 (532)
Q Consensus 93 ~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~--~~~~----~~h~~~i~~~~~~~~---~~~~l~s~--s~dg~i~ 161 (532)
-.....++|.|||.++++--..|.|++++..++.. +..+ .........++|+|+ ++.+.++- ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 45668999999999777776689999998665543 2222 123456889999983 24333332 2456677
Q ss_pred EEECCCC----------eEEE-ecc-CCCCceEEEEEeCCCCCEEEEEeC-------------CCeEEEEEcccCC----
Q 038802 162 FWDVAGE----------SVVL-DLF-GHKDYVRCGDCSPVNGDMFVTGSY-------------DHTVKLWDVRVEN---- 212 (532)
Q Consensus 162 iwd~~~~----------~~~~-~~~-~~~~~v~~i~~~~~~~~~l~s~s~-------------dg~i~iwd~~~~~---- 212 (532)
-|....+ +.+. .+. .....-..+.|.| ++.+.++.+. .|.|.-.+....-
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 7766541 2221 121 1112345689999 8887777542 2455555544210
Q ss_pred ---ceeEEEecCCCcEEEEEEecCCCEEEEEc--CCeEEEEEccCCC-----------------eeeEEccCCCcceEEE
Q 038802 213 ---SKSVMEVNHGKPIEDVMFLPSGGLIATAG--GNSVKIWDLIGGG-----------------KMVYSMESHNKTVTSV 270 (532)
Q Consensus 213 ---~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--d~~i~iwd~~~~~-----------------~~~~~~~~~~~~i~~~ 270 (532)
...++..++. ....++|+|+|.+.++-. ++.=.|--+..+. .++..+..+......+
T Consensus 190 Pf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~ 268 (347)
T 3das_A 190 PFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGI 268 (347)
T ss_dssp SSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEE
T ss_pred CCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcce
Confidence 1224444443 456899999888776654 3322222222221 1122222222344566
Q ss_pred EEeccCCCCCccccccEEEEEecCCeEEEEECCCceE----EEeee-cCCCeeEEEEecCCCEEEEEe
Q 038802 271 CVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKV----THSMR-FPAPLMSVAFSPDCMTRVIGT 333 (532)
Q Consensus 271 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~-~~~~v~~~~~s~~~~~l~~g~ 333 (532)
+|.. +..++..-..+.|....+..... ...+. ....+..++..|||.++++.+
T Consensus 269 ~~~~----------g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 269 AYAE----------GSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEET----------TEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred EEEc----------CceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 6653 34444444455566666654432 11121 235788888889887655543
No 351
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.11 E-value=1.4 Score=45.87 Aligned_cols=191 Identities=14% Similarity=0.093 Sum_probs=101.6
Q ss_pred CCCCeEEEEEeC----CeEEEEeCCCceEEEEe-e-------ccCceeEEEEEccCCCEEEEEcCC------CCEEEEEC
Q 038802 61 PTTSHLFAATHS----ASLTLFSSQTLEKHSAI-S-------SFKDVVTCSSFRPDGSLLAASDLS------GLIQVFDV 122 (532)
Q Consensus 61 p~~~~l~~~~~d----~~v~i~~~~~~~~~~~~-~-------~~~~~v~~~~~~~~~~~l~~g~~d------g~i~iwd~ 122 (532)
.++..++.|+.+ +.+.+||..+.+-...- . .....-.++.+..++++++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456666667643 46888998776543322 1 111122233332277777887643 35888998
Q ss_pred CCCceEEE--ecCCCCCEEEEEeecCCCcEEEEEeCCC--eEEEEECCCCeEEEecc-----CCCCceEEEEEeCCCCCE
Q 038802 123 KSRTPLRR--LKSHTRPVRFVKYPFLDKLHLVSGGDDG--IVKFWDVAGESVVLDLF-----GHKDYVRCGDCSPVNGDM 193 (532)
Q Consensus 123 ~~~~~~~~--~~~h~~~i~~~~~~~~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~-----~~~~~v~~i~~~~~~~~~ 193 (532)
.+.+-... +......-.++.+ . ++.+++.|+.++ .+.+||..+..-...-. .......++.+....+.+
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~-~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSL-P-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEEC-T-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcEEECCCCCCCcccceEEEE-c-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 87543322 1111111122222 2 677778887655 68999998775432211 111122234555422667
Q ss_pred EEEEeC--C-----CeEEEEEcccCC------ceeEEEe-cCCCcEEEEEEecCCCEEEEEc-C--------CeEEEEEc
Q 038802 194 FVTGSY--D-----HTVKLWDVRVEN------SKSVMEV-NHGKPIEDVMFLPSGGLIATAG-G--------NSVKIWDL 250 (532)
Q Consensus 194 l~s~s~--d-----g~i~iwd~~~~~------~~~~~~~-~~~~~v~~i~~~~~~~~l~~~~-d--------~~i~iwd~ 250 (532)
++.|+. + ..+.+||+.+.. -...... .....-.+++...++.+++.|+ + ..+.+||+
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 777776 2 358899998765 1222111 1111122333444467777766 2 35889998
Q ss_pred cCC
Q 038802 251 IGG 253 (532)
Q Consensus 251 ~~~ 253 (532)
.+.
T Consensus 634 ~t~ 636 (695)
T 2zwa_A 634 LSE 636 (695)
T ss_dssp TTT
T ss_pred CCC
Confidence 765
No 352
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.00 E-value=2 Score=38.87 Aligned_cols=223 Identities=12% Similarity=0.035 Sum_probs=114.9
Q ss_pred CeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEec
Q 038802 53 SINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLK 132 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 132 (532)
.|..++.... +.++.. ||.|+.|-......+.........|..++...+ ..++. . ||.|..|-......+..-.
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~-hs~~l-~-~G~v~~wG~n~~Gqlg~P~ 98 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY-HSLAL-K-DGEVIAWGGNEDGQTTVPA 98 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS-EEEEE-E-TTEEEEEECCTTSTTCCCG
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC-EEEEE-E-CCEEEEeeCCCCCCCCCCc
Confidence 5667776543 333335 899999965432211111112235666655433 23333 4 8999998765422111111
Q ss_pred CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCC
Q 038802 133 SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVEN 212 (532)
Q Consensus 133 ~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~ 212 (532)
.-...|..++... .+.+.-. ||.|+.|-......+.........|..++.-. .+.+.-. ||.+..|-.....
T Consensus 99 ~~~~~v~~ia~G~---~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~---~~~~~l~-~G~v~~wG~n~~g 170 (282)
T 3qhy_B 99 EARSGVDAIAAGA---WASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGV---YTALAVK-NGGVIAWGDNYFG 170 (282)
T ss_dssp GGSSSEEEEEEET---TEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECS---SEEEEEE-TTEEEEEECCTTS
T ss_pred ccCCCeEEEECcC---CEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEccc---CEEEEEE-CCEEEEecCCCCC
Confidence 1134677777643 3344445 99999997654222111111234576676543 3333334 7999999765422
Q ss_pred ceeEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEe
Q 038802 213 SKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVA 292 (532)
Q Consensus 213 ~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~ 292 (532)
.... .......|..++..... .++. .+|.+..|-....+++-.... ....|..++.... ..+.-.
T Consensus 171 qlg~-p~~~~~~v~~i~~G~~h-s~al-~~G~v~~wG~n~~gqlg~p~~-~~~~v~~i~~G~~-----------h~~al~ 235 (282)
T 3qhy_B 171 QTTV-PAEAQSGVDDVAGGIFH-SLAL-KDGKVIAWGDNRYKQTTVPTE-ALSGVSAIASGEW-----------YSLALK 235 (282)
T ss_dssp TTSC-CGGGGSSEEEEEECSSE-EEEE-ETTEEEEEECCTTSTTCCCGG-GGSSCCEEEECSS-----------CEEEEE
T ss_pred CCCC-ceecCCCeEEEEecCCE-EEEE-ECCeEEEEECCCCCCCCCCcc-cCCCceEEEcCCC-----------EEEEEE
Confidence 2211 11123457777665433 3444 689999997654433211111 1234666665433 233334
Q ss_pred cCCeEEEEECCCc
Q 038802 293 LDGYMKVFDYGKM 305 (532)
Q Consensus 293 ~dg~i~iwd~~~~ 305 (532)
||.|..|-....
T Consensus 236 -~g~v~~wG~n~~ 247 (282)
T 3qhy_B 236 -NGKVIAWGSSRT 247 (282)
T ss_dssp -TTEEEEESTTCC
T ss_pred -CCEEEEecCCCC
Confidence 999999976553
No 353
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=94.87 E-value=2.1 Score=38.75 Aligned_cols=222 Identities=14% Similarity=0.059 Sum_probs=115.4
Q ss_pred eeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec
Q 038802 95 VVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL 174 (532)
Q Consensus 95 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 174 (532)
.|..++.... ..++. . ||.|+.|-....-.+..-......|..++.. ....++. . ||.|..|-....-.+..-
T Consensus 25 ~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G--~~hs~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAG--NYHSLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEEC--SSEEEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeC--CCEEEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 4555554332 22333 4 8888888764322111111122356666654 2333343 4 899999976542211111
Q ss_pred cCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCC
Q 038802 175 FGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGG 254 (532)
Q Consensus 175 ~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~ 254 (532)
..-...|..++... .+.+.-. ||.|..|-......... .......|..++...... ++.. +|.+..|-....+
T Consensus 98 ~~~~~~v~~ia~G~---~hs~al~-~G~v~~wG~n~~gqlg~-~~~~~~~i~~i~~G~~~~-~~l~-~G~v~~wG~n~~g 170 (282)
T 3qhy_B 98 AEARSGVDAIAAGA---WASYALK-DGKVIAWGDDSDGQTTV-PAEAQSGVTALDGGVYTA-LAVK-NGGVIAWGDNYFG 170 (282)
T ss_dssp GGGSSSEEEEEEET---TEEEEEE-TTEEEEEECCTTSTTSC-CGGGGSSEEEEEECSSEE-EEEE-TTEEEEEECCTTS
T ss_pred cccCCCeEEEECcC---CEEEEEe-CCeEEEecCCCCCcCCC-CccCCCCeEEEEcccCEE-EEEE-CCEEEEecCCCCC
Confidence 11234677777754 3444445 99999997654222211 112334576666543333 3333 7889998765433
Q ss_pred eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc-eEEEeeecCCCeeEEEEecCCCEEEEEe
Q 038802 255 KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM-KVTHSMRFPAPLMSVAFSPDCMTRVIGT 333 (532)
Q Consensus 255 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~g~ 333 (532)
++-... .-...|..++.... ..+.- .||.|..|-.... ++-...+....|..++..... .++. +
T Consensus 171 qlg~p~-~~~~~v~~i~~G~~-----------hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al-~ 235 (282)
T 3qhy_B 171 QTTVPA-EAQSGVDDVAGGIF-----------HSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLAL-K 235 (282)
T ss_dssp TTSCCG-GGGSSEEEEEECSS-----------EEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEEE-E
T ss_pred CCCCce-ecCCCeEEEEecCC-----------EEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCE-EEEE-E
Confidence 321111 11245777766543 23333 5999999976542 211111222457777765543 3333 3
Q ss_pred cCCcEEEEeecCc
Q 038802 334 SNGTIFAGRRKKK 346 (532)
Q Consensus 334 ~dg~i~iw~~~~~ 346 (532)
||.|+.|-....
T Consensus 236 -~g~v~~wG~n~~ 247 (282)
T 3qhy_B 236 -NGKVIAWGSSRT 247 (282)
T ss_dssp -TTEEEEESTTCC
T ss_pred -CCEEEEecCCCC
Confidence 999999987654
No 354
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.66 E-value=8.6 Score=38.07 Aligned_cols=229 Identities=12% Similarity=0.075 Sum_probs=129.8
Q ss_pred EEEEEcCCCCEEEEECCCCceEEEecCCC-------------------------CCE--EEEEeec--CCCcEEEEEe-C
Q 038802 107 LLAASDLSGLIQVFDVKSRTPLRRLKSHT-------------------------RPV--RFVKYPF--LDKLHLVSGG-D 156 (532)
Q Consensus 107 ~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-------------------------~~i--~~~~~~~--~~~~~l~s~s-~ 156 (532)
.+.+|+..|.|+|+-+.+++.+..+.-.+ +.. ..+.+.. -++.+++.-. .
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 36688999999999999988877663110 001 1222210 1455666665 4
Q ss_pred CCeEEEEECCCCeEEEecc-CCCCceEEEEEe--CCCCCEEEEEeC-------CCeE---------EE---EEcccCCce
Q 038802 157 DGIVKFWDVAGESVVLDLF-GHKDYVRCGDCS--PVNGDMFVTGSY-------DHTV---------KL---WDVRVENSK 214 (532)
Q Consensus 157 dg~i~iwd~~~~~~~~~~~-~~~~~v~~i~~~--~~~~~~l~s~s~-------dg~i---------~i---wd~~~~~~~ 214 (532)
+..|-..+++..++-..+. .....+.++.+. | +..++++++. ||.. .+ .|..+ ..
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p-~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~t--m~ 228 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVP-HTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAET--ME 228 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSS-BCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTT--CS
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccC-CccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCc--cE
Confidence 5678888888877655442 244567777775 5 6667777664 2221 11 11111 11
Q ss_pred eEEEecCCCcEEEEEEecCCCEEEEEc-C---------------CeEEEEEccC-------CC-e-----eeEEccCC--
Q 038802 215 SVMEVNHGKPIEDVMFLPSGGLIATAG-G---------------NSVKIWDLIG-------GG-K-----MVYSMESH-- 263 (532)
Q Consensus 215 ~~~~~~~~~~v~~i~~~~~~~~l~~~~-d---------------~~i~iwd~~~-------~~-~-----~~~~~~~~-- 263 (532)
..++..-......+...++|.+.++.+ + ..+.++++.. +. + -+..+.+.
T Consensus 229 v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~ 308 (638)
T 3sbq_A 229 MAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKK 308 (638)
T ss_dssp EEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCB
T ss_pred EEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccccc
Confidence 111111122333455566777766653 1 1366676531 10 0 01111111
Q ss_pred -------------CcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc------e-------EEEeeecCCCe
Q 038802 264 -------------NKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM------K-------VTHSMRFPAPL 317 (532)
Q Consensus 264 -------------~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~------~-------~~~~~~~~~~v 317 (532)
......+.++|+| ...++++-.+.++.++|+... + ........-..
T Consensus 309 ~~~~~~~~~~iP~pksPHGv~vsPDG--------kyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGP 380 (638)
T 3sbq_A 309 DGKDSKFTRYVPVPKNPHGCNTSSDG--------KYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGP 380 (638)
T ss_dssp TTBCCSSEEEEEESSSCCCEEECTTS--------CEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCE
T ss_pred cccCCceEEEEeCCCCCcceeeCCCC--------CEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcc
Confidence 1223446667774 345555666899999998752 1 23444455577
Q ss_pred eEEEEecCCCEEEEEecCCcEEEEeecCc
Q 038802 318 MSVAFSPDCMTRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 318 ~~~~~s~~~~~l~~g~~dg~i~iw~~~~~ 346 (532)
...+|.++|....+-.-|..|.-|++...
T Consensus 381 lHt~Fd~~G~aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 381 LHTTFDGRGNAYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp EEEEECSSSEEEEEETTTTEEEEEEHHHH
T ss_pred cEEEECCCCceEeeeeecceEEEEeccHH
Confidence 88999999955556668999999999875
No 355
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=90.95 E-value=9.3 Score=34.95 Aligned_cols=187 Identities=14% Similarity=0.110 Sum_probs=108.8
Q ss_pred CCcEEEEEeCCCeEEEEECCCCeE-------EE--eccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCce---
Q 038802 147 DKLHLVSGGDDGIVKFWDVAGESV-------VL--DLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSK--- 214 (532)
Q Consensus 147 ~~~~l~s~s~dg~i~iwd~~~~~~-------~~--~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~--- 214 (532)
+..++++.+.+|.|+--.+...+. +. .+.. .+.+..+.... ..+.++..+..|.++-+....-...
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~-~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVN-THDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEE-TTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEEC-CCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 567889999999999887643221 11 1222 34444444444 4567777788898777665421110
Q ss_pred ----e---EEEecCCCcEEEEEEec---CCC-EEEEEcCCeEEEEEccCC------CeeeEEccCCCcceEEEEEeccCC
Q 038802 215 ----S---VMEVNHGKPIEDVMFLP---SGG-LIATAGGNSVKIWDLIGG------GKMVYSMESHNKTVTSVCVGRVGN 277 (532)
Q Consensus 215 ----~---~~~~~~~~~v~~i~~~~---~~~-~l~~~~d~~i~iwd~~~~------~~~~~~~~~~~~~i~~~~~~~~~~ 277 (532)
. .+.+..+..|.++...+ ++. +++....|.++...+... +.....+.. ...+..+.....
T Consensus 85 ~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~-- 161 (312)
T 1suu_A 85 SKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFK-- 161 (312)
T ss_dssp ---CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECT--
T ss_pred CCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCC--
Confidence 0 11223445566554432 344 444444898888877432 122223333 445666555533
Q ss_pred CCCccccccEEEEEecCCeEEEEECCCce-------EEEeee--cCCCeeEEEEecCCCEEEEEecCCcEEEEeecC
Q 038802 278 ESGEEAMQYRILSVALDGYMKVFDYGKMK-------VTHSMR--FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKK 345 (532)
Q Consensus 278 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-------~~~~~~--~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~ 345 (532)
...++..+.+|.+..++...-. -+..+. ....|.++...+++..+++.+..|..+...+..
T Consensus 162 -------~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 162 -------DEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp -------TCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred -------CCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 4568889999999999875521 122222 345666766656667788889999988877653
No 356
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=88.70 E-value=14 Score=33.85 Aligned_cols=188 Identities=11% Similarity=0.017 Sum_probs=106.9
Q ss_pred CCCCeEEEEEeCCeEEEEeCCCce----EEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECC---C------Cce
Q 038802 61 PTTSHLFAATHSASLTLFSSQTLE----KHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVK---S------RTP 127 (532)
Q Consensus 61 p~~~~l~~~~~d~~v~i~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~---~------~~~ 127 (532)
|+.+++++.+.+|.|+--.....+ .-..+.. .+.+..+........|+..+..|.++-+... . |.+
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 566788899999999876543211 1111222 3455555555566677777778887666542 1 221
Q ss_pred EEE---ecCCCCCEEEEEeecC--CCcEEEEEeCCCeEEEEECCC--------CeEEEeccCCCCceEEEEEeCCCCCEE
Q 038802 128 LRR---LKSHTRPVRFVKYPFL--DKLHLVSGGDDGIVKFWDVAG--------ESVVLDLFGHKDYVRCGDCSPVNGDMF 194 (532)
Q Consensus 128 ~~~---~~~h~~~i~~~~~~~~--~~~~l~s~s~dg~i~iwd~~~--------~~~~~~~~~~~~~v~~i~~~~~~~~~l 194 (532)
+.. +. ....|.++...+. ++.+++.++.+|.++...+.. +.....+.. .+.+..+.... ..+.+
T Consensus 82 i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~-~~~~i 158 (323)
T 1wp5_A 82 IANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTD-GMNEL 158 (323)
T ss_dssp GGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEEC-SCSEE
T ss_pred hhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeC-CCCEE
Confidence 111 11 2334555433221 256799999999999987742 222222332 25555555554 55677
Q ss_pred EEEeCCCeEEEEEcccC-------CceeEEEecCCCcEEEEEEecCCC--EEEEEcCCeEEEEEccC
Q 038802 195 VTGSYDHTVKLWDVRVE-------NSKSVMEVNHGKPIEDVMFLPSGG--LIATAGGNSVKIWDLIG 252 (532)
Q Consensus 195 ~s~s~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~i~~~~~~~--~l~~~~d~~i~iwd~~~ 252 (532)
+..+.+|.+..++...- ..........+..|.++...+++. +++.+..|..+..++..
T Consensus 159 ~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 159 FLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 78888999888876431 222333334456677765544444 44444478777777653
No 357
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=88.59 E-value=25 Score=36.42 Aligned_cols=237 Identities=4% Similarity=-0.066 Sum_probs=121.7
Q ss_pred CeeEEE-EcCCCCeEEEEEe-CC----eEEEEeCCCceEEEE-ee-ccCc------eeEEEEEccCCCEEEEE-------
Q 038802 53 SINSIV-FSPTTSHLFAATH-SA----SLTLFSSQTLEKHSA-IS-SFKD------VVTCSSFRPDGSLLAAS------- 111 (532)
Q Consensus 53 ~V~~i~-~sp~~~~l~~~~~-d~----~v~i~~~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~l~~g------- 111 (532)
....+. ++|++++++.+-+ +| .++++|+.+++.+.. +. .-+. ....++|..++..+++.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCB
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCc
Confidence 344555 8999998776544 33 799999999876631 11 0000 11344776444344431
Q ss_pred ---cCCCCEEEEECCCCc--eEEEecCCCCCEE-EEEeecCCCc-----EEEEEeCC---CeEEEEECCC--CeEEEecc
Q 038802 112 ---DLSGLIQVFDVKSRT--PLRRLKSHTRPVR-FVKYPFLDKL-----HLVSGGDD---GIVKFWDVAG--ESVVLDLF 175 (532)
Q Consensus 112 ---~~dg~i~iwd~~~~~--~~~~~~~h~~~i~-~~~~~~~~~~-----~l~s~s~d---g~i~iwd~~~--~~~~~~~~ 175 (532)
+....|+.|.+-+.. -...+.+....+. ....++ ++. .+++.+.+ ..+.+.|... ++.. .+.
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l~ 287 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLL-SDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQ-KIN 287 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESS-CTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEE-ECC
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEec-CCCceEEEEEEEEecccCceeEEEEcCCCCCCcce-Eee
Confidence 112458888876542 2333443333332 233344 443 34544422 4566666553 3322 232
Q ss_pred CCCCceEEEEEeCCCCCEEEEE----------eCCCeEEEEEcccCC-------ce-eEEEecCCCcEEEEEEecCCCEE
Q 038802 176 GHKDYVRCGDCSPVNGDMFVTG----------SYDHTVKLWDVRVEN-------SK-SVMEVNHGKPIEDVMFLPSGGLI 237 (532)
Q Consensus 176 ~~~~~v~~i~~~~~~~~~l~s~----------s~dg~i~iwd~~~~~-------~~-~~~~~~~~~~v~~i~~~~~~~~l 237 (532)
...+. .+..+. ++.+++.. ...+.|...|+.+.. .. ..+.......+..+.+..+ .++
T Consensus 288 ~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 288 MPSDA--TLQGSF-KEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVF 363 (711)
T ss_dssp SCTTC--EEEEEE-TTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEE
T ss_pred cCCcc--eEeeeE-CCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEE
Confidence 22221 122333 45554432 235679999987642 11 1233334557788888865 455
Q ss_pred EEEc-CC--eEEEEEccCCCeeeEE-ccCC-CcceEEEEEeccCCCCCccccccEEEEEec---CCeEEEEECC
Q 038802 238 ATAG-GN--SVKIWDLIGGGKMVYS-MESH-NKTVTSVCVGRVGNESGEEAMQYRILSVAL---DGYMKVFDYG 303 (532)
Q Consensus 238 ~~~~-d~--~i~iwd~~~~~~~~~~-~~~~-~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~---dg~i~iwd~~ 303 (532)
++.. ++ .+.++|+.++.-.... +... .+.+.....++++ ..++++.+. -+.+..+|+.
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~--------~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEE--------EEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTC--------SCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcC--------CEEEEEEecCCCCCEEEEEeCC
Confidence 5555 55 5788887655211222 2111 2456555555554 445555543 3678888876
No 358
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=88.25 E-value=15 Score=33.48 Aligned_cols=231 Identities=12% Similarity=0.074 Sum_probs=123.7
Q ss_pred CCCCeEEEEEeCCeEEEEeCCCceEEE---------EeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECC---C----
Q 038802 61 PTTSHLFAATHSASLTLFSSQTLEKHS---------AISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVK---S---- 124 (532)
Q Consensus 61 p~~~~l~~~~~d~~v~i~~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~---~---- 124 (532)
|+.+++++.+.+|.|+--.+.+.+... .+.. .+.+..+........|+..+..|.++-+... .
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 456678899999999877765432211 1122 3445455455556667777778876666542 1
Q ss_pred --CceEE---EecCCCCCEEEEEeec--CCCcEEEEEeCCCeEEEEECCC-------CeEEEeccCCCCceEEEEEeCCC
Q 038802 125 --RTPLR---RLKSHTRPVRFVKYPF--LDKLHLVSGGDDGIVKFWDVAG-------ESVVLDLFGHKDYVRCGDCSPVN 190 (532)
Q Consensus 125 --~~~~~---~~~~h~~~i~~~~~~~--~~~~~l~s~s~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~i~~~~~~ 190 (532)
|..+. .+. ....|.++...+ .+..+++..+.+|.++...+.. +.....+..+ +.+..+.... +
T Consensus 80 a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~-~ 156 (307)
T 1zi0_A 80 ARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTS-G 156 (307)
T ss_dssp SCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEEC-T
T ss_pred CCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeC-C
Confidence 22111 122 234555554321 1456789999999999987642 2122223333 5555555554 4
Q ss_pred CCEEEEEeCCCeEEEEEcccC-------CceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCC--------
Q 038802 191 GDMFVTGSYDHTVKLWDVRVE-------NSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGG-------- 254 (532)
Q Consensus 191 ~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~-------- 254 (532)
...++..+.+|.+..++...- ..........+..|.++...+++..++..+ .|.++-.++....
T Consensus 157 ~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG 236 (307)
T 1zi0_A 157 EDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKG 236 (307)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCC
T ss_pred CCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCC
Confidence 566777888898888876431 122223334556677776555555455555 7888888764210
Q ss_pred eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 255 KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 255 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
.....+....+.+..+....+ ...++..+.+|.+.-+++..
T Consensus 237 ~~~~~~~~~~~~lv~~~~v~~---------~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 237 VISIKVTERNGLVVGAVQVDD---------CDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp EESSCCCTTTCSEEEEEEECT---------TCEEEEEESSCCEEEEEGGG
T ss_pred EEeeEecCCCCeEEEEEEeCC---------CceEEEEcCCCcEEEEeccc
Confidence 111112222234444444332 23456666677766666554
No 359
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=87.45 E-value=19 Score=33.78 Aligned_cols=170 Identities=10% Similarity=0.043 Sum_probs=98.2
Q ss_pred EcCCCCeEEEEEeCCeEEEEeCCC---------ceEEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECC---C--
Q 038802 59 FSPTTSHLFAATHSASLTLFSSQT---------LEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVK---S-- 124 (532)
Q Consensus 59 ~sp~~~~l~~~~~d~~v~i~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~---~-- 124 (532)
+-|+..++++.+.+|.|+--.+.+ +..-..+.. .+.+..+........|+..+..|.++-+... .
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 457888999999999999764321 222223332 4566666666666677777778877666542 1
Q ss_pred ----CceEE---EecCCCCCEEEEEeec--CCCcEEEEEeCCCeEEEEECCC-------CeEEEeccCCCCceEEEEEeC
Q 038802 125 ----RTPLR---RLKSHTRPVRFVKYPF--LDKLHLVSGGDDGIVKFWDVAG-------ESVVLDLFGHKDYVRCGDCSP 188 (532)
Q Consensus 125 ----~~~~~---~~~~h~~~i~~~~~~~--~~~~~l~s~s~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~i~~~~ 188 (532)
|..+. .+. ....|.++.... ....+++.++..|.++...+.. +.....+.. .+.+..+....
T Consensus 82 r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~ 159 (370)
T 3l6v_A 82 SNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTD 159 (370)
T ss_dssp TTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEEC
T ss_pred cccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeC
Confidence 22111 122 234555554322 1356899999999999987643 222222332 44555555554
Q ss_pred CCCCEEEEEeCCCeEEEEEcccC-------CceeEEEecCCCcEEEEEEec
Q 038802 189 VNGDMFVTGSYDHTVKLWDVRVE-------NSKSVMEVNHGKPIEDVMFLP 232 (532)
Q Consensus 189 ~~~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~i~~~~ 232 (532)
....++..+.+|.+..++...- .....+.+.....|.++...+
T Consensus 160 -~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~ 209 (370)
T 3l6v_A 160 -GDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSE 209 (370)
T ss_dssp -SCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEEC
T ss_pred -CCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEec
Confidence 5567777888898888876431 222233334455666665544
No 360
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=86.88 E-value=18 Score=32.98 Aligned_cols=189 Identities=13% Similarity=0.127 Sum_probs=109.8
Q ss_pred cCCCCeEEEEEeCCeEEEEeCCCceE-------EE--EeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECCC---C--
Q 038802 60 SPTTSHLFAATHSASLTLFSSQTLEK-------HS--AISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKS---R-- 125 (532)
Q Consensus 60 sp~~~~l~~~~~d~~v~i~~~~~~~~-------~~--~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~---~-- 125 (532)
-|+.+++++.+.+|.|+-........ .. .+.. .+.+..+........++..+..|.++-+.... .
T Consensus 5 i~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC---
T ss_pred cCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCc
Confidence 35667889999999999876543321 11 1222 34555555555666777778889877766531 1
Q ss_pred ----ce---EEEecCCCCCEEEEEeec--CCCcEEEEEeCCCeEEEEECCC-------CeEEEeccCCCCceEEEEEeCC
Q 038802 126 ----TP---LRRLKSHTRPVRFVKYPF--LDKLHLVSGGDDGIVKFWDVAG-------ESVVLDLFGHKDYVRCGDCSPV 189 (532)
Q Consensus 126 ----~~---~~~~~~h~~~i~~~~~~~--~~~~~l~s~s~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~i~~~~~ 189 (532)
.. ...+. ....|.++...+ .+..+++..+.+|.++...+.. |.....+.. .+.+..+....
T Consensus 84 ~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~- 160 (312)
T 1suu_A 84 ASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVF- 160 (312)
T ss_dssp ----CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEEC-
T ss_pred cCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeC-
Confidence 11 01122 223455443322 1356788899999999988742 222223333 45566665554
Q ss_pred CCCEEEEEeCCCeEEEEEccc-------CCceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccC
Q 038802 190 NGDMFVTGSYDHTVKLWDVRV-------ENSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIG 252 (532)
Q Consensus 190 ~~~~l~s~s~dg~i~iwd~~~-------~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~ 252 (532)
.+..++..+.+|.+..++... ......+....+..|.++...+++..+++.+ .|..+..++..
T Consensus 161 ~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 161 KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 566788888999999888753 1223333334456666666554455444444 78888888753
No 361
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=86.74 E-value=34 Score=35.97 Aligned_cols=148 Identities=10% Similarity=0.003 Sum_probs=79.1
Q ss_pred ccCeeEEEEcCCC-CeEEEEEeCCeEEEEeCCCceEEEEeecc-------CceeEEEEEccC-CCEEEEEcCCCC----E
Q 038802 51 VSSINSIVFSPTT-SHLFAATHSASLTLFSSQTLEKHSAISSF-------KDVVTCSSFRPD-GSLLAASDLSGL----I 117 (532)
Q Consensus 51 ~~~V~~i~~sp~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-------~~~v~~~~~~~~-~~~l~~g~~dg~----i 117 (532)
.+.|.+|+++|.. ..+++++..+.|...+ +.++.-..+..+ ...+.++++.|. ...++++..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 4589999999974 4566677667666654 334333333321 246999999984 344444432211 3
Q ss_pred EEEEC-CCCceEEEecC--C-----C--CCEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEecc------CCCCce
Q 038802 118 QVFDV-KSRTPLRRLKS--H-----T--RPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLF------GHKDYV 181 (532)
Q Consensus 118 ~iwd~-~~~~~~~~~~~--h-----~--~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~------~~~~~v 181 (532)
.||.. +.++.-..+.. . . ..+..++++|.+...++.+...+.|.. ..+.++.-..+. .....+
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCCCe
Confidence 34433 33332222211 0 1 135568888755667777764444322 222232211111 112457
Q ss_pred EEEEEeCCCCCEEEEEeCC
Q 038802 182 RCGDCSPVNGDMFVTGSYD 200 (532)
Q Consensus 182 ~~i~~~~~~~~~l~s~s~d 200 (532)
..+.++|.++..++.+..+
T Consensus 172 ~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEECTTSTTCEEEEESS
T ss_pred EEEEECCCCCCEEEEEEcC
Confidence 8899988666666666654
No 362
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.49 E-value=25 Score=34.18 Aligned_cols=235 Identities=12% Similarity=0.089 Sum_probs=119.3
Q ss_pred ceeEEEEEccCCC-EEEEEcCCCCEEEEECCCC---ceEEEec---------CCCCCEEEEEeecC---CCcEEEEEeC-
Q 038802 94 DVVTCSSFRPDGS-LLAASDLSGLIQVFDVKSR---TPLRRLK---------SHTRPVRFVKYPFL---DKLHLVSGGD- 156 (532)
Q Consensus 94 ~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~~~~---~~~~~~~---------~h~~~i~~~~~~~~---~~~~l~s~s~- 156 (532)
.....++|.|||. .|+++...|.|++++.... ..+..+. ........|+|+|. ++.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4567899999996 4555567899999975422 1222221 11456889999982 2344443332
Q ss_pred -C----------CeEEEEECCC----------CeEEEecc--CCCCceEEEEEeCCCCCEEEEEeCCC------------
Q 038802 157 -D----------GIVKFWDVAG----------ESVVLDLF--GHKDYVRCGDCSPVNGDMFVTGSYDH------------ 201 (532)
Q Consensus 157 -d----------g~i~iwd~~~----------~~~~~~~~--~~~~~v~~i~~~~~~~~~l~s~s~dg------------ 201 (532)
+ ..|.-|.+.. .+.+..+. ........+.|.| ++.+.++.+..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~~ 172 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDMEEMDGL 172 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHHHCTTC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCccccccCc
Confidence 1 1454565532 12333322 1122457899999 888777655432
Q ss_pred -----eEEEEEcccCC-------------------ceeEEEecCCCcEEEEEEecC-----CC-EEEEEcC-C----eEE
Q 038802 202 -----TVKLWDVRVEN-------------------SKSVMEVNHGKPIEDVMFLPS-----GG-LIATAGG-N----SVK 246 (532)
Q Consensus 202 -----~i~iwd~~~~~-------------------~~~~~~~~~~~~v~~i~~~~~-----~~-~l~~~~d-~----~i~ 246 (532)
.|.-.|..... ...++..+|.. ...++|+|. |. ++..+.. | .-.
T Consensus 173 ~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN-p~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~e 251 (463)
T 2wg3_C 173 SDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD-PGRCAVDRHPTDININLTILCSDSNGKNRSSAR 251 (463)
T ss_dssp CSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS-CCBEEEESSCSSTTCSEEEEEECC------CEE
T ss_pred CCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC-cceEEECCCCCCcccceEEEecccCCCCCCCCe
Confidence 23333333210 12344444443 357899996 44 3443331 2 123
Q ss_pred EEEccCCC-----eeeEEccCCC-cceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCce---EEEee------
Q 038802 247 IWDLIGGG-----KMVYSMESHN-KTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMK---VTHSM------ 311 (532)
Q Consensus 247 iwd~~~~~-----~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~------ 311 (532)
|..+..+. .++..+..|. ..+..+.|-....... -.+. ++.+...+.|....++... ....+
T Consensus 252 i~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~--~~g~-~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~ 328 (463)
T 2wg3_C 252 ILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSER--LYGS-YVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSG 328 (463)
T ss_dssp EEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTT--TTTC-EEEEETTSCEEEEEC-----CCEEEEECEEETT
T ss_pred EeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChh--hcce-EEEecCCCcEEEEEeCCCCceeeEEEeecCCcc
Confidence 33332221 2444554332 4677777764432111 1133 4455555776666654321 11111
Q ss_pred ----ecCCCeeEEEEecCCCEEEEEe
Q 038802 312 ----RFPAPLMSVAFSPDCMTRVIGT 333 (532)
Q Consensus 312 ----~~~~~v~~~~~s~~~~~l~~g~ 333 (532)
.....+..+.+.|||.++++..
T Consensus 329 ~~~~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 329 SCRGYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp SSCSCCCSEEEEEEECTTCCEEEEEE
T ss_pred cccccccCcceEEEECCCCCEEEEec
Confidence 1235789999999998877765
No 363
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=85.93 E-value=21 Score=32.80 Aligned_cols=231 Identities=13% Similarity=0.034 Sum_probs=126.6
Q ss_pred CCeEEEEEeCCeEEEEeCCCce-------EEEEee-ccCceeEEEEEccCCCEEEEEcCCCCEEEEEC---CC------C
Q 038802 63 TSHLFAATHSASLTLFSSQTLE-------KHSAIS-SFKDVVTCSSFRPDGSLLAASDLSGLIQVFDV---KS------R 125 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~~-------~~~~~~-~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~---~~------~ 125 (532)
.+.+++.+.+|.|+--.+.+.+ -...+. ...+.+..+........|+.-+..|.++-... .. |
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCC
Confidence 3467788888988866532211 111111 12345555555556666776667887665543 22 2
Q ss_pred ceEEEe-c-CCCCCEEEEEeecC--CCcEEEEEeCCCeEEEEECCCC-------eEEEeccCCCCceEEEEEeCCCCCEE
Q 038802 126 TPLRRL-K-SHTRPVRFVKYPFL--DKLHLVSGGDDGIVKFWDVAGE-------SVVLDLFGHKDYVRCGDCSPVNGDMF 194 (532)
Q Consensus 126 ~~~~~~-~-~h~~~i~~~~~~~~--~~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~i~~~~~~~~~l 194 (532)
..+..+ . .....|.++..-+. +..+++.++.+|.++.-.+... .....+.. .+.+..+.... ....+
T Consensus 83 ~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~-~~d~i 160 (327)
T 3uc1_A 83 QHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCS-AGDDL 160 (327)
T ss_dssp EEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEEC-TTCEE
T ss_pred EEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEec-CCCEE
Confidence 221111 1 12345555543321 4678999999999999876542 22222333 34555555554 55677
Q ss_pred EEEeCCCeEEEEEcc--cC-------CceeEEEecCCCcEEEEEEecCCCEEEEEc-CCeEEEEEccCCC------eeeE
Q 038802 195 VTGSYDHTVKLWDVR--VE-------NSKSVMEVNHGKPIEDVMFLPSGGLIATAG-GNSVKIWDLIGGG------KMVY 258 (532)
Q Consensus 195 ~s~s~dg~i~iwd~~--~~-------~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-d~~i~iwd~~~~~------~~~~ 258 (532)
+..+..|.+..+... .- .....+.+..+..|.++...+.+..++..+ .|.++.-.+.... +-+.
T Consensus 161 ll~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~ 240 (327)
T 3uc1_A 161 LLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVL 240 (327)
T ss_dssp EEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred EEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEE
Confidence 788888988877765 21 111222334566677776666555555555 8888888764321 1122
Q ss_pred Ecc--CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 259 SME--SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 259 ~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
.+. .-.+.+..+..... ...++..+.+|.+.-++...
T Consensus 241 ~~~l~~~~d~lv~~~~~~~---------~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 241 TVMYDRRRGRLVGALIVDD---------DSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp SSCCCTTTCSEEEEEEECT---------TCEEEEEEGGGCEEEEEGGG
T ss_pred EEEecCCCCeEEEEEEeCC---------CccEEEEcCCCeEEEEehhh
Confidence 222 21234545444333 34577777788877777654
No 364
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=85.48 E-value=25 Score=33.22 Aligned_cols=228 Identities=14% Similarity=0.140 Sum_probs=121.0
Q ss_pred CCEEEEEcCCCCEEEEECCCC--------c---eEEEecC-CCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC----
Q 038802 105 GSLLAASDLSGLIQVFDVKSR--------T---PLRRLKS-HTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE---- 168 (532)
Q Consensus 105 ~~~l~~g~~dg~i~iwd~~~~--------~---~~~~~~~-h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~---- 168 (532)
....+.-..||.|..|-.... . ....+.. ....+..++.+. ...+.+.-..||.|+.|-....
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~-G~~h~~al~~~G~v~~wG~n~~GqLG 140 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNS-GGKHCLALSSEGEVYSWGEAEDGKLG 140 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECT-TCSEEEEEETTSCEEEEECCGGGTTC
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECc-CCCeEEEEcCCCCEEEEeCCCCCcCC
Confidence 345555566888888864321 0 1111221 223455566665 6667777788999999964321
Q ss_pred -------eEEEeccC-CCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCC------c----eeEE-EecCCCcEEEEE
Q 038802 169 -------SVVLDLFG-HKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVEN------S----KSVM-EVNHGKPIEDVM 229 (532)
Q Consensus 169 -------~~~~~~~~-~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~------~----~~~~-~~~~~~~v~~i~ 229 (532)
.....+.. ....|..++.- ..+.+.-..||.|..|=..... . .+.. .......|..++
T Consensus 141 ~g~~~~~~~p~~v~~l~~~~i~~va~G---~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia 217 (389)
T 3kci_A 141 HGNRSPCDRPRVIESLRGIEVVDVAAG---GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 217 (389)
T ss_dssp SSSCCCEEEEEECGGGTTSCEEEEEEC---SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEE
T ss_pred CCCCccCcCCeEecccCCCeEEEEEeC---cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEE
Confidence 11112221 22356666653 4566666789999999643210 0 0111 111234566666
Q ss_pred Eec-CCCEEEEEcCCeEEEEEccCCCe----------eeEEccC-CCcceEEEEEeccCCCCCccccccEEEEEecCCeE
Q 038802 230 FLP-SGGLIATAGGNSVKIWDLIGGGK----------MVYSMES-HNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYM 297 (532)
Q Consensus 230 ~~~-~~~~l~~~~d~~i~iwd~~~~~~----------~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i 297 (532)
... +...++...+|.|..|-....++ ....+.. ....|..++... ...++-..||.|
T Consensus 218 ~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~-----------~hs~alt~~G~v 286 (389)
T 3kci_A 218 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS-----------QFSVALTKSGAV 286 (389)
T ss_dssp ECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEET-----------TEEEEEETTSCE
T ss_pred EcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCC-----------CEEEEEeCCCeE
Confidence 543 23455555689999996432111 1111111 122455665543 345566789999
Q ss_pred EEEECCCc-----------eEEEeee-c-CCCeeEEEEecCCCEEEEEecCCcEEEEeecCcccc
Q 038802 298 KVFDYGKM-----------KVTHSMR-F-PAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENV 349 (532)
Q Consensus 298 ~iwd~~~~-----------~~~~~~~-~-~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~ 349 (532)
+.|-.... .....+. . ...|..++.. ....++-..||.|+.|-.+..-..
T Consensus 287 ~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G--~~h~~al~~~G~v~~wG~n~~GqL 349 (389)
T 3kci_A 287 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTWGDNDEGQL 349 (389)
T ss_dssp EEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTCCEEEEECCTTSTT
T ss_pred EEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEec--cCeEEEECCCCCEEEeeCCCCCcC
Confidence 99975431 1111111 1 1345555543 345566688999999988765433
No 365
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=83.39 E-value=24 Score=31.44 Aligned_cols=198 Identities=12% Similarity=-0.044 Sum_probs=109.7
Q ss_pred CceeEEEEEccCCCEEEEEcCCCCEEEEEC---CCCceEEEecCCCCCEEEEEeecC-CCcEEEEEeCCCeEEEEECCCC
Q 038802 93 KDVVTCSSFRPDGSLLAASDLSGLIQVFDV---KSRTPLRRLKSHTRPVRFVKYPFL-DKLHLVSGGDDGIVKFWDVAGE 168 (532)
Q Consensus 93 ~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~---~~~~~~~~~~~h~~~i~~~~~~~~-~~~~l~s~s~dg~i~iwd~~~~ 168 (532)
.+.+..+.......+|+.-++.|.++--.+ ........+. ....|..+.. +. +...++..+.+|.++...+...
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~ 100 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEF 100 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGT
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHh
Confidence 355666555555556666667887665432 2211100133 3455666543 31 4568999999999999987543
Q ss_pred ------eEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccC-------CceeEEEecCCCcEEEEEEecCCC
Q 038802 169 ------SVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVE-------NSKSVMEVNHGKPIEDVMFLPSGG 235 (532)
Q Consensus 169 ------~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~i~~~~~~~ 235 (532)
.....+. ..+.+..+.... ..+.++..+..|.+..++...- .......+..+..|.++...+++.
T Consensus 101 ~~~~~G~~~i~lk-egD~l~~~~~~~-~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~ 178 (276)
T 3no0_A 101 EYKAQGMPIIKLT-EGDEVVSIASSV-DETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEP 178 (276)
T ss_dssp TTCSTTEECSCCC-TTCCEEEEEECC-SSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCS
T ss_pred hhhcCCeEEEecC-CCCEEEEEEEeC-CCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCC
Confidence 2222223 234555555554 5567888889999888875421 222223334456677666555555
Q ss_pred EEEEEc-CCeEEEEEccCC------CeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEE--EECCC
Q 038802 236 LIATAG-GNSVKIWDLIGG------GKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKV--FDYGK 304 (532)
Q Consensus 236 ~l~~~~-d~~i~iwd~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~i--wd~~~ 304 (532)
.++..+ .|.++...+..- ++-+..+ ...+.+..+..... ...++..+.+|.+.. ++...
T Consensus 179 ~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~---------~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 179 YLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKE---------EVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESS---------EEEEEEEETTSCEEEEEEEGGG
T ss_pred EEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCC---------CCEEEEEcCCCeEEEeeeCHHH
Confidence 555555 788888876432 1122222 22334444433322 345666777777766 76544
No 366
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=82.30 E-value=27 Score=31.16 Aligned_cols=196 Identities=14% Similarity=0.081 Sum_probs=108.2
Q ss_pred CCEEEEEeecCCCcEEEEEeCCCeEEEE---ECCCCeEEEeccCCCCceEEEEEeCC-CCCEEEEEeCCCeEEEEEcccC
Q 038802 136 RPVRFVKYPFLDKLHLVSGGDDGIVKFW---DVAGESVVLDLFGHKDYVRCGDCSPV-NGDMFVTGSYDHTVKLWDVRVE 211 (532)
Q Consensus 136 ~~i~~~~~~~~~~~~l~s~s~dg~i~iw---d~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~l~s~s~dg~i~iwd~~~~ 211 (532)
+.+..+.-.. ....++.-+.+|.++-- ++..+.... +......|..+.. +. ++.+++..+.+|.++-..+..-
T Consensus 24 D~~~~~~~~~-t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-ll~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~ 100 (276)
T 3no0_A 24 APVVNILRVP-FTEGLFLVSNRGRVYWIAGSQALQGSKVS-LKSREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEF 100 (276)
T ss_dssp CCEEEEEEEE-TTSCEEEEETTSEEEEECSHHHHTSEECC-CSSTTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGT
T ss_pred CeEEEEEEEC-CCCEEEEEcCCCeEEEEEhhhCccCcccc-cCCCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHh
Confidence 3444444444 44556666677776643 332221111 1223455666544 31 3578999999999999987653
Q ss_pred C----ceeEEEecCCCcEEEEEEecCCC-EEEEEcCCeEEEEEccCC--------CeeeEEccCCCcceEEEEEeccCCC
Q 038802 212 N----SKSVMEVNHGKPIEDVMFLPSGG-LIATAGGNSVKIWDLIGG--------GKMVYSMESHNKTVTSVCVGRVGNE 278 (532)
Q Consensus 212 ~----~~~~~~~~~~~~v~~i~~~~~~~-~l~~~~d~~i~iwd~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~ 278 (532)
. .........+..+..+....... +++....|.+..++...- +.....+.. ...|..+...++
T Consensus 101 ~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~--- 176 (276)
T 3no0_A 101 EYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNG--- 176 (276)
T ss_dssp TTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESS---
T ss_pred hhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCC---
Confidence 2 12222233445565555544444 455555888877775421 112222222 245555555443
Q ss_pred CCccccccEEEEEecCCeEEEEECCCce-------EEEeeecCCCeeEEEEecCCCEEEEEecCCcEEE--Eeec
Q 038802 279 SGEEAMQYRILSVALDGYMKVFDYGKMK-------VTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFA--GRRK 344 (532)
Q Consensus 279 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~-------~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i--w~~~ 344 (532)
+..++..+..|.++...+.... -+..+...+.+..+....++..++..+.+|.+.. ++..
T Consensus 177 ------~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 177 ------EPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp ------CSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred ------CCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 4578889999999999875422 2222233345555544444456777788888777 6654
No 367
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.14 E-value=59 Score=34.99 Aligned_cols=37 Identities=16% Similarity=0.024 Sum_probs=31.9
Q ss_pred CEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEec
Q 038802 137 PVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDL 174 (532)
Q Consensus 137 ~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 174 (532)
.+.+++..+ +..++++-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 466777776 7889999999999999999999988765
No 368
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=81.86 E-value=31 Score=31.59 Aligned_cols=186 Identities=13% Similarity=0.086 Sum_probs=103.5
Q ss_pred CCcEEEEEeCCCeEEEEECCCC----eEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEc---ccCC----ce-
Q 038802 147 DKLHLVSGGDDGIVKFWDVAGE----SVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDV---RVEN----SK- 214 (532)
Q Consensus 147 ~~~~l~s~s~dg~i~iwd~~~~----~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~---~~~~----~~- 214 (532)
+...+++.+.+|.|+--.+... ..-..+.. .+.+..+.... ..+.++..+..|.+.-+.. .... ..
T Consensus 4 ~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~-t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 4 SEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMN-TKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp CCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEE-TTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred CCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEEC-CCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 6678899999999987765311 11112232 33444444444 4566777778888665544 2211 11
Q ss_pred --eEEEecCCCcEEEEEEecC---CCEEEEEc-CCeEEEEEccCC-------CeeeEEccCCCcceEEEEEeccCCCCCc
Q 038802 215 --SVMEVNHGKPIEDVMFLPS---GGLIATAG-GNSVKIWDLIGG-------GKMVYSMESHNKTVTSVCVGRVGNESGE 281 (532)
Q Consensus 215 --~~~~~~~~~~v~~i~~~~~---~~~l~~~~-d~~i~iwd~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 281 (532)
..+.+..+..|.++..-++ +.+++.++ .|.++-..+... +.....+.. ...+..+.....
T Consensus 82 i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~------ 154 (323)
T 1wp5_A 82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDG------ 154 (323)
T ss_dssp GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECS------
T ss_pred hhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCC------
Confidence 1112334555666543332 45555555 899998887521 122222222 244555554433
Q ss_pred cccccEEEEEecCCeEEEEECCCce-------EEEeee--cCCCeeEEEEecCCC-EEEEEecCCcEEEEeec
Q 038802 282 EAMQYRILSVALDGYMKVFDYGKMK-------VTHSMR--FPAPLMSVAFSPDCM-TRVIGTSNGTIFAGRRK 344 (532)
Q Consensus 282 ~~~~~~l~s~~~dg~i~iwd~~~~~-------~~~~~~--~~~~v~~~~~s~~~~-~l~~g~~dg~i~iw~~~ 344 (532)
...++..+.+|.+..++...-. -+..++ ....|.++...+++. .+++.+..|..+..++.
T Consensus 155 ---~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 155 ---MNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp ---CSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred ---CCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 4568888889999888865421 122222 334566665555555 78888888887765554
No 369
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=80.99 E-value=58 Score=34.17 Aligned_cols=109 Identities=11% Similarity=0.009 Sum_probs=60.6
Q ss_pred CceeEEEEEccC-CCEEEEEcCCCCEEEEECCCCceEEEecCC-------CCCEEEEEeecCCCcEEEEEeCC------C
Q 038802 93 KDVVTCSSFRPD-GSLLAASDLSGLIQVFDVKSRTPLRRLKSH-------TRPVRFVKYPFLDKLHLVSGGDD------G 158 (532)
Q Consensus 93 ~~~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h-------~~~i~~~~~~~~~~~~l~s~s~d------g 158 (532)
...|.+++++|. ...+++++..+.|...+ +.++.-..+..+ ...|.+++++|.+...++.+..+ +
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999985 45666777667665554 334433333322 24699999998555556655433 2
Q ss_pred eEEEEECCCCeEEEeccC---------CCCceEEEEEeCCCCCEEEEEeCCCeE
Q 038802 159 IVKFWDVAGESVVLDLFG---------HKDYVRCGDCSPVNGDMFVTGSYDHTV 203 (532)
Q Consensus 159 ~i~iwd~~~~~~~~~~~~---------~~~~v~~i~~~~~~~~~l~s~s~dg~i 203 (532)
.| +...+.++.-..+.. ....+..++++|.+++.++.+...+.|
T Consensus 93 ~v-~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl 145 (789)
T 1sqj_A 93 AF-YVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI 145 (789)
T ss_dssp EE-EEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE
T ss_pred EE-EEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE
Confidence 22 223333432222211 011355688888566677777644433
No 370
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=80.49 E-value=57 Score=33.72 Aligned_cols=233 Identities=7% Similarity=0.030 Sum_probs=118.6
Q ss_pred EEEE-EccCCCEEEEE-cC----CCCEEEEECCCCceEEE-ec-CCCC------CEEEEEeecCCCcEEEEE--------
Q 038802 97 TCSS-FRPDGSLLAAS-DL----SGLIQVFDVKSRTPLRR-LK-SHTR------PVRFVKYPFLDKLHLVSG-------- 154 (532)
Q Consensus 97 ~~~~-~~~~~~~l~~g-~~----dg~i~iwd~~~~~~~~~-~~-~h~~------~i~~~~~~~~~~~~l~s~-------- 154 (532)
..+. ++|++++++.+ +. -..++++|+.+++.+.. +. ..+. ....++|.. +...+++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d-~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWIN-KDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEE-TTEEEECCCCSTTCBC
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEEC-CCEEEEEeCCCCCCcC
Confidence 3444 88999988865 22 23699999999876531 11 0001 013347764 44444431
Q ss_pred --eCCCeEEEEECCCCe--EEEeccCCCCce-EEEEEeCCCCC-----EEEEEeCC---CeEEEEEcccCCce-eEEEec
Q 038802 155 --GDDGIVKFWDVAGES--VVLDLFGHKDYV-RCGDCSPVNGD-----MFVTGSYD---HTVKLWDVRVENSK-SVMEVN 220 (532)
Q Consensus 155 --s~dg~i~iwd~~~~~--~~~~~~~~~~~v-~~i~~~~~~~~-----~l~s~s~d---g~i~iwd~~~~~~~-~~~~~~ 220 (532)
+....|+.|.+-+.. -...+.+....+ .+...++ ++. .+++.+.+ ..+.+.|....... ..+...
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 289 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLL-SDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMP 289 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESS-CTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSC
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEec-CCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecC
Confidence 122568888876542 222233222222 2344455 444 34444322 34566665532222 112212
Q ss_pred CCCcEEEEEEecCCCEEEEE-----------cCCeEEEEEccCCC------eeeEE-c-cCCCcceEEEEEeccCCCCCc
Q 038802 221 HGKPIEDVMFLPSGGLIATA-----------GGNSVKIWDLIGGG------KMVYS-M-ESHNKTVTSVCVGRVGNESGE 281 (532)
Q Consensus 221 ~~~~v~~i~~~~~~~~l~~~-----------~d~~i~iwd~~~~~------~~~~~-~-~~~~~~i~~~~~~~~~~~~~~ 281 (532)
.... +..+.++.+++.. ..+.|...|+.+.. ..... + ......+..+.+..+
T Consensus 290 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------ 360 (711)
T 4hvt_A 290 SDAT---LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD------ 360 (711)
T ss_dssp TTCE---EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS------
T ss_pred Ccce---EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC------
Confidence 2222 2344566655533 24578888887531 11122 2 223446777888754
Q ss_pred cccccEEEEEecCCe--EEEEECCCceE-EEe-eec--CCCeeEEEEecCCCE-EEEEec---CCcEEEEeec
Q 038802 282 EAMQYRILSVALDGY--MKVFDYGKMKV-THS-MRF--PAPLMSVAFSPDCMT-RVIGTS---NGTIFAGRRK 344 (532)
Q Consensus 282 ~~~~~~l~s~~~dg~--i~iwd~~~~~~-~~~-~~~--~~~v~~~~~s~~~~~-l~~g~~---dg~i~iw~~~ 344 (532)
.++++...++. +.++|+.++.. ... +.. .+.+....+++++.. +++.++ -+.++.++..
T Consensus 361 ----~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 361 ----RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp ----CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred ----EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 46777777765 66777666641 222 333 345666667777654 444433 3567777765
No 371
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=77.83 E-value=43 Score=30.74 Aligned_cols=197 Identities=9% Similarity=0.018 Sum_probs=112.2
Q ss_pred ccCeeEEEEcCCCCeEEEEEeCCeEEEEe---CCC------ceEEEE---eeccCceeEEE-EEcc--CCCEEEEEcCCC
Q 038802 51 VSSINSIVFSPTTSHLFAATHSASLTLFS---SQT------LEKHSA---ISSFKDVVTCS-SFRP--DGSLLAASDLSG 115 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~d~~v~i~~---~~~------~~~~~~---~~~~~~~v~~~-~~~~--~~~~l~~g~~dg 115 (532)
.+.+..+........++..+..|.++-.. +.. |..+.. +.. ...|.++ .+.. +..+++..+.+|
T Consensus 41 ~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~e~~~v~~T~~G 119 (327)
T 3uc1_A 41 DDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQP-EERIAQVIQIRGYTDAPYLVLATRNG 119 (327)
T ss_dssp GGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCT-TCCEEEEEEESSTTSSSEEEEEETTS
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCC-CCEEEEEEEeccCCCCCEEEEEcCCC
Confidence 45566666555666788888888776554 332 222111 122 3445544 4432 577999999999
Q ss_pred CEEEEECCCCc-------eEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECC--CCe-------EEEecc-CCC
Q 038802 116 LIQVFDVKSRT-------PLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVA--GES-------VVLDLF-GHK 178 (532)
Q Consensus 116 ~i~iwd~~~~~-------~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~--~~~-------~~~~~~-~~~ 178 (532)
.|+...+.... ....++. .+.+..+.... ....++..+..|.+..+... .-. -+..+. ...
T Consensus 120 ~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~-~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~ 197 (327)
T 3uc1_A 120 LVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCS-AGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNID 197 (327)
T ss_dssp EEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEEC-TTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTT
T ss_pred EEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEec-CCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCC
Confidence 99998764321 1122333 34455554544 55678888899998888766 211 111111 234
Q ss_pred CceEEEEEeCCCCCEEEEEeCCCeEEEEEcccC-------CceeEEEecC-CCcEEEEEE-ecCCCEEEEEcCCeEEEEE
Q 038802 179 DYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVE-------NSKSVMEVNH-GKPIEDVMF-LPSGGLIATAGGNSVKIWD 249 (532)
Q Consensus 179 ~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~~~-~~~v~~i~~-~~~~~~l~~~~d~~i~iwd 249 (532)
+.|.++...+ .+..++..+..|.++.-.+..- +....+.... ...+..+.. ..+..+++...+|.+.-++
T Consensus 198 d~Vv~~~~~~-~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~ 276 (327)
T 3uc1_A 198 DRLLSLNVVR-EGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTA 276 (327)
T ss_dssp CCEEEEEECC-TTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEE
T ss_pred CEEEEEEEEC-CCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEe
Confidence 5676766665 5678899999999998876432 1122222211 334444443 3344455555577776776
Q ss_pred cc
Q 038802 250 LI 251 (532)
Q Consensus 250 ~~ 251 (532)
..
T Consensus 277 ~~ 278 (327)
T 3uc1_A 277 AR 278 (327)
T ss_dssp GG
T ss_pred hh
Confidence 54
No 372
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=77.43 E-value=32 Score=37.10 Aligned_cols=38 Identities=13% Similarity=0.217 Sum_probs=32.8
Q ss_pred eeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEec
Q 038802 95 VVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLK 132 (532)
Q Consensus 95 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 132 (532)
.+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56777778888899999999999999999999887653
No 373
>3s6n_2 SurviVal of motor neuron protein-interacting PROT; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_A
Probab=77.36 E-value=3.5 Score=36.79 Aligned_cols=48 Identities=15% Similarity=0.215 Sum_probs=40.9
Q ss_pred HHHHhcCCChHhHHHHHHHHHhccCCCCchHHHHHHHHHHHHhccccc
Q 038802 441 LMKCVSNLDNEELGLLLSFMQKHSTVPRYSGLLIGLMEKVLEMRAKDI 488 (532)
Q Consensus 441 l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~ 488 (532)
.-..+..++...+..||+++++|+....+..-...|+..+|-.-..-+
T Consensus 179 ~l~~l~~ld~~~v~~LL~~~~~wl~~~~~~~~~~~WlyaLLa~Ld~pL 226 (280)
T 3s6n_2 179 LLSIVSRMNQATVTSVLEYLSNWFGERDFTPELGRWLYALLACLEKPL 226 (280)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHGGGTSCCCHHHHHHHHHHHHHCCSSC
T ss_pred cHHHHHhCCHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHhCCCC
Confidence 556778999999999999999999877788899999999998765444
No 374
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=76.60 E-value=53 Score=31.24 Aligned_cols=231 Identities=12% Similarity=0.053 Sum_probs=122.2
Q ss_pred eeEEEEEccCCCEEEEEcCCCCEEEEECCCC-c------------eEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEE
Q 038802 95 VVTCSSFRPDGSLLAASDLSGLIQVFDVKSR-T------------PLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVK 161 (532)
Q Consensus 95 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~-~------------~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~ 161 (532)
.|..++. .+.+.+.-..||.|+.|-.... + ....+. ....|..++. ...+.+.-..||.|+
T Consensus 76 ~v~~va~--G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~---G~~hs~al~~~G~v~ 149 (423)
T 3mvd_K 76 DAVDISA--GGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALCISA---GDSHSACLLEDGRVF 149 (423)
T ss_dssp SEEEEEE--CSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEE---CSSEEEEEETTSCEE
T ss_pred CceEEee--CCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEc---CcCeEEEEeCCCeEE
Confidence 3544443 4455666667899999965321 1 011111 2345666665 445666678899999
Q ss_pred EEEC--CC-CeE---------EEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCC-----------------
Q 038802 162 FWDV--AG-ESV---------VLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVEN----------------- 212 (532)
Q Consensus 162 iwd~--~~-~~~---------~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~----------------- 212 (532)
.|-. .. ++. ..........|..++.. ..+.+.-..||.|+.|=.....
T Consensus 150 ~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G---~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~ 226 (423)
T 3mvd_K 150 AWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASG---ADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRG 226 (423)
T ss_dssp EEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEEC---SSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTT
T ss_pred EEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecC---CCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccc
Confidence 9975 22 221 11111123456666653 3556666789999999543210
Q ss_pred -----ceeEEEecCCCcEEEEEEecCCCEEEE-EcCCeEEEEEccCCCee----------eEEccCCCcceEEEEEeccC
Q 038802 213 -----SKSVMEVNHGKPIEDVMFLPSGGLIAT-AGGNSVKIWDLIGGGKM----------VYSMESHNKTVTSVCVGRVG 276 (532)
Q Consensus 213 -----~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~iwd~~~~~~~----------~~~~~~~~~~i~~~~~~~~~ 276 (532)
............|..++.... ..++. ..++.|..|-....+++ ..........|..++..
T Consensus 227 ~~~~~~p~~v~~~~~~~v~~i~~g~~-~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G--- 302 (423)
T 3mvd_K 227 KRDLLRPTQLIITRAKPFEAIWATNY-CTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGG--- 302 (423)
T ss_dssp TTTTSSCEEECCTTCCCEEEEEEETT-EEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEEC---
T ss_pred cccccCCeEEeecCCccEEEEEECCc-EEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcc---
Confidence 111122233445666665433 23333 34888888875432110 11111112345555543
Q ss_pred CCCCccccccEEEEEecCCeEEEEECCCc------------eEEEeee-cCCCeeEEEEecCCCEEEEEecCCcEEEEee
Q 038802 277 NESGEEAMQYRILSVALDGYMKVFDYGKM------------KVTHSMR-FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRR 343 (532)
Q Consensus 277 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~------------~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~ 343 (532)
....+.-..||.|+.|-.... .....+. ....|..++... ...++-+.||.|+.|-.
T Consensus 303 --------~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~--~hs~alt~~G~v~~wG~ 372 (423)
T 3mvd_K 303 --------QHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGE--VCSYAVTIDGKLYSWGS 372 (423)
T ss_dssp --------SSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEET--TEEEEEETTSCEEEEEC
T ss_pred --------cCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCC--CeEEEEcCCCCEEEECC
Confidence 345666678999999965431 1111222 223577776654 34444578999999987
Q ss_pred cCccc
Q 038802 344 KKKEN 348 (532)
Q Consensus 344 ~~~~~ 348 (532)
...-.
T Consensus 373 n~~Gq 377 (423)
T 3mvd_K 373 GVNNQ 377 (423)
T ss_dssp CTTSC
T ss_pred CCCCC
Confidence 65433
No 375
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=76.41 E-value=76 Score=32.94 Aligned_cols=117 Identities=11% Similarity=0.018 Sum_probs=62.9
Q ss_pred ccccccCCCccCccccCeeEEEEcCCC-CeEEEEEeCCeEEEEeCCCceEEEEeecc-------CceeEEEEEcc-CCCE
Q 038802 37 KYWSSFKPHQIPGLVSSINSIVFSPTT-SHLFAATHSASLTLFSSQTLEKHSAISSF-------KDVVTCSSFRP-DGSL 107 (532)
Q Consensus 37 ~~w~~~~~~~~~~h~~~V~~i~~sp~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-------~~~v~~~~~~~-~~~~ 107 (532)
.-|+...+.. -.+.|..|+++|.. ..+++++..+.|...+- .++.-..+..+ ...|.++++.| +.+.
T Consensus 11 ~~w~~~~~~~---~~g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~ 86 (737)
T 2cn3_A 11 YKWDNVVIGG---GGGFMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNR 86 (737)
T ss_dssp EEEEEECCCS---BCSCCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTC
T ss_pred CeeEEcccCC---CcceeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCE
Confidence 3466544322 23389999999975 35666665676666652 23333333221 24589999998 4344
Q ss_pred EEEEcCC-------CCEEEEECCC-CceEEEec-CC--------CCCEEEEEeecCCCcEEEEEeCC
Q 038802 108 LAASDLS-------GLIQVFDVKS-RTPLRRLK-SH--------TRPVRFVKYPFLDKLHLVSGGDD 157 (532)
Q Consensus 108 l~~g~~d-------g~i~iwd~~~-~~~~~~~~-~h--------~~~i~~~~~~~~~~~~l~s~s~d 157 (532)
++++... +...||.... ++.-..+. .. ...+..++++|.+...++.+...
T Consensus 87 v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 87 VYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp EEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred EEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 4444321 1245555433 32222211 11 01246788988666777777643
No 376
>2vxg_A LD41624, GE-1, CG6181-PA, isoform A; decapping, EDC4, hedls, mRNA decay, P-BODY, gene regulation; 1.9A {Drosophila melanogaster}
Probab=76.38 E-value=25 Score=27.44 Aligned_cols=99 Identities=12% Similarity=0.061 Sum_probs=63.1
Q ss_pred hHHHhhcccchHHHHHHhhCCCCChhHHHHHHHHHhhchHHHHh----cCCChHhHHHHHHHHHhccCCCCchHHHHHHH
Q 038802 402 EHDKLLKKFRHKEALVSVLNGKNPENVVAVMEELVARKKLMKCV----SNLDNEELGLLLSFMQKHSTVPRYSGLLIGLM 477 (532)
Q Consensus 402 ~~~~~l~~~~~~~al~~al~~~~~~~~~~~~~~l~~~~~l~~~~----~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 477 (532)
++.+++.+++|.+|+..||...+-. ++..+..+-.....+ ..++.--+..|.+-++.-+++. ...=..|+
T Consensus 6 ~I~~Ll~~g~~eeAf~~aL~ssd~~----lv~~lc~~~dp~~~~~~~~~~Lsq~vLLSLiqqls~dL~~~--~~~Kl~WL 79 (139)
T 2vxg_A 6 SIKQLLMAGQINKAFHQALLANDLG----LVEFTLRHTDSNQAFAPEGCRLEQKVLLSLIQQISADMTNH--NELKQRYL 79 (139)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTTCHH----HHHHHHHHSCHHHHTC----CCCHHHHHHHHHHHHHCCTTC--CHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHhCcHH----HHHHHHHcCCHHHhcCCCCCCccHHHHHHHHHHHHHHhccC--cHHHHHHH
Confidence 4788999999999999999877664 333333333333335 5677777888888888888543 35557899
Q ss_pred HHHHHhccccccccHHHHHHHHHHHHHHHHHH
Q 038802 478 EKVLEMRAKDIRTCDALKGHIRNLKRSVEEEI 509 (532)
Q Consensus 478 ~~il~~~~~~~~~~~~l~~~~~~l~~~~~~~~ 509 (532)
+.++..-...- |.+.+...++.+.+...+
T Consensus 80 e~vl~aid~~d---p~i~~~~p~Il~~l~~~L 108 (139)
T 2vxg_A 80 NEALLAINMAD---PITREHAPKVLTELYRNC 108 (139)
T ss_dssp HHHHHHCCTTS---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCC---chHHHHHHHHHHHHHHHH
Confidence 88877644322 555555444444443333
No 377
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=76.29 E-value=40 Score=29.63 Aligned_cols=143 Identities=13% Similarity=0.067 Sum_probs=79.1
Q ss_pred CEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEE-EEEecCCCEEEEEcCCeEEEEE---c---cCCCeeeE---Ecc
Q 038802 192 DMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIED-VMFLPSGGLIATAGGNSVKIWD---L---IGGGKMVY---SME 261 (532)
Q Consensus 192 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~-i~~~~~~~~l~~~~d~~i~iwd---~---~~~~~~~~---~~~ 261 (532)
..+++.+.+|.|+--........ ......+..+.. +..+....+++..+.|.++-+. + +..+.++. .+.
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~-~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~ 81 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAP-GLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP 81 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCST-TSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC
T ss_pred CEEEEEeCCCEEEEeeCCcCCce-eccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC
Confidence 35566778888876554331111 111222333433 3444455666666677655554 3 22222221 121
Q ss_pred CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc-------eEEEeeecCCCeeEEEEe-cCCCEEEEEe
Q 038802 262 SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM-------KVTHSMRFPAPLMSVAFS-PDCMTRVIGT 333 (532)
Q Consensus 262 ~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~v~~~~~s-~~~~~l~~g~ 333 (532)
....|.++....+ ..+++.++..|.++...+... ...-.++-...+..+... .++..++..+
T Consensus 82 -~~e~Iv~~~~~~~---------~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T 151 (256)
T 1zvt_A 82 -PGATVDHMLMESD---------DQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAIT 151 (256)
T ss_dssp -TTCCEEEEECCCT---------TCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEE
T ss_pred -CCCEEEEEEEeCC---------CCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEc
Confidence 2345666633222 456888999999999987542 222333333455555555 3456888999
Q ss_pred cCCcEEEEeecC
Q 038802 334 SNGTIFAGRRKK 345 (532)
Q Consensus 334 ~dg~i~iw~~~~ 345 (532)
.+|.+..+....
T Consensus 152 ~~G~~lrf~~~e 163 (256)
T 1zvt_A 152 QAGRMLMFPVSD 163 (256)
T ss_dssp TTSEEEEEEGGG
T ss_pred CCCeEEEEEHHH
Confidence 999988887754
No 378
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=73.16 E-value=70 Score=30.99 Aligned_cols=105 Identities=12% Similarity=0.083 Sum_probs=60.3
Q ss_pred cCeeEEEEcCCCC-eEEEEEeCCeEEEEeCCCce---EEEEee---------ccCceeEEEEEccC---CCEEEEE-cC-
Q 038802 52 SSINSIVFSPTTS-HLFAATHSASLTLFSSQTLE---KHSAIS---------SFKDVVTCSSFRPD---GSLLAAS-DL- 113 (532)
Q Consensus 52 ~~V~~i~~sp~~~-~l~~~~~d~~v~i~~~~~~~---~~~~~~---------~~~~~v~~~~~~~~---~~~l~~g-~~- 113 (532)
..-..|+|.|+|. .++++...|.|++++..... .+..+. ........++|+|+ +.+|++. +.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3457899999996 57777889999999754221 112111 11356788999996 2333332 21
Q ss_pred -C----------CCEEEEECCC----------CceEEEec--CCCCCEEEEEeecCCCcEEEEEeCC
Q 038802 114 -S----------GLIQVFDVKS----------RTPLRRLK--SHTRPVRFVKYPFLDKLHLVSGGDD 157 (532)
Q Consensus 114 -d----------g~i~iwd~~~----------~~~~~~~~--~h~~~i~~~~~~~~~~~~l~s~s~d 157 (532)
+ ..|.-|.+.. .+.+..+. ........|.|.| ++.+.++.++.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCC
Confidence 1 1344455532 12222222 1122357899999 88777766543
No 379
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=69.33 E-value=78 Score=29.93 Aligned_cols=273 Identities=12% Similarity=0.107 Sum_probs=139.0
Q ss_pred CeeEEEEcCCCCeEEEEEeCCeEEEEeCCC-c----------eEEEEeecc-CceeEEEEEccCCCEEEEEcCCCCEEEE
Q 038802 53 SINSIVFSPTTSHLFAATHSASLTLFSSQT-L----------EKHSAISSF-KDVVTCSSFRPDGSLLAASDLSGLIQVF 120 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~-~----------~~~~~~~~~-~~~v~~~~~~~~~~~l~~g~~dg~i~iw 120 (532)
.|..|+.. ..+.++...+|.|+.|-... + .....+... ...|..++...+ ..++....++.|+.|
T Consensus 17 ~v~~ia~G--~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~-ht~al~~~gg~v~~w 93 (406)
T 4d9s_A 17 KVLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD-HTVAYSQSGMEVYSW 93 (406)
T ss_dssp CEEEEEEC--SSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSS-EEEEEETTTTEEEEE
T ss_pred ceEEEecC--CCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcc-eEEEEECCCCEEEEE
Confidence 56666654 34566677889999995422 1 111122221 235665554322 233333334589998
Q ss_pred ECCCC-c----------eEEEecC-CCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC----------e-EEEeccC-
Q 038802 121 DVKSR-T----------PLRRLKS-HTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE----------S-VVLDLFG- 176 (532)
Q Consensus 121 d~~~~-~----------~~~~~~~-h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~----------~-~~~~~~~- 176 (532)
-.... + ....+.. ....|..++. ...+.+.-..||.|+.|-.... . ....+..
T Consensus 94 G~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~---G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~ 170 (406)
T 4d9s_A 94 GWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC---GDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF 170 (406)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE---CSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGG
T ss_pred cCCCCcCCCCCCCCccccceEecccCCCCEEEEEE---ChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEeccc
Confidence 64321 0 0111111 2335777665 4556677788999999975421 1 1111221
Q ss_pred CCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCc----------eeEE-EecCCCcEEEEEEecCCCEEEEEcCCeE
Q 038802 177 HKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENS----------KSVM-EVNHGKPIEDVMFLPSGGLIATAGGNSV 245 (532)
Q Consensus 177 ~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~----------~~~~-~~~~~~~v~~i~~~~~~~~l~~~~d~~i 245 (532)
....|..++.. ..+.+.-..||.|..|-...... .+.. .......|..++.. ....++...+|.|
T Consensus 171 ~~~~i~~va~G---~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G-~~ht~~l~~~G~v 246 (406)
T 4d9s_A 171 EGIRIKMVAAG---AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG-WRHTISVSYSGAL 246 (406)
T ss_dssp TTCCEEEEEEC---SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC-SSEEEEEETTCCE
T ss_pred CCCcEEEEecC---CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC-CCcEEEEcCCCCE
Confidence 22356666653 45666667899999996432110 0111 11122455555543 2234444558888
Q ss_pred EEEEccCCCee----------eEEcc-CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc---------
Q 038802 246 KIWDLIGGGKM----------VYSME-SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM--------- 305 (532)
Q Consensus 246 ~iwd~~~~~~~----------~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--------- 305 (532)
..|-....+++ ...+. .....|..++.. ....++-..||.|+.|-....
T Consensus 247 ~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G-----------~~hs~alt~~G~v~~wG~n~~GqLG~g~~~ 315 (406)
T 4d9s_A 247 YTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGG-----------WRHTMALTSDGKLYGWGWNKFGQVGVGNNL 315 (406)
T ss_dssp EEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEEC-----------SSEEEEEETTSCEEEEECCTTSTTCSSSSS
T ss_pred EEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEec-----------CCEEEEEcCCCeEEEeeCCCCCCCCCCCCC
Confidence 88875432111 11111 112335555543 335566678999999964431
Q ss_pred eE--EEeee--cCCCeeEEEEecCCCEEEEEecCCcEEEEeecCccc
Q 038802 306 KV--THSMR--FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKEN 348 (532)
Q Consensus 306 ~~--~~~~~--~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~ 348 (532)
.. ...+. ....|..++.. ....++-+.+|.|+.|=....-.
T Consensus 316 ~~~~p~~v~~~~~~~v~~va~G--~~hs~alt~~G~v~~wG~n~~Gq 360 (406)
T 4d9s_A 316 DQCSPVQVRFPDDQKVVQVSCG--WRHTLAVTERNNVFAWGRGTNGQ 360 (406)
T ss_dssp CEEEEEEECCGGGCCEEEEEEC--SSEEEEEETTSCEEEEECCTTST
T ss_pred CCccCEEEeccCCCcEEEEEeC--CCeEEEEeCCCCEEEecCCCCCc
Confidence 11 11111 22355555543 34556667899999998765433
No 380
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=66.93 E-value=85 Score=29.44 Aligned_cols=226 Identities=15% Similarity=0.090 Sum_probs=119.5
Q ss_pred CCeEEEEEeCCeEEEEeCCCc-----------eEEEEeecc-CceeEEEEEccCCCEEEEEcCCCCEEEEECCCC-----
Q 038802 63 TSHLFAATHSASLTLFSSQTL-----------EKHSAISSF-KDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSR----- 125 (532)
Q Consensus 63 ~~~l~~~~~d~~v~i~~~~~~-----------~~~~~~~~~-~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~----- 125 (532)
....++.+.||.|+.|-.... .....+... ...+..++++......+.-..||.|+.|-....
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 345666778899999954221 111122221 234555667666666666777999999965321
Q ss_pred ------ceEEEecC-CCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC----------e-EEEec-cCCCCceEEEEE
Q 038802 126 ------TPLRRLKS-HTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE----------S-VVLDL-FGHKDYVRCGDC 186 (532)
Q Consensus 126 ------~~~~~~~~-h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~----------~-~~~~~-~~~~~~v~~i~~ 186 (532)
.....+.. ....|..++. ...+.+.-..||.|+.|-.... . ....+ ......|..++.
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~---G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~ 218 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAA---GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIAC 218 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEE---CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred CCCccCcCCeEecccCCCeEEEEEe---CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEE
Confidence 01111221 1235666665 4556677778999999965321 0 11111 112345666665
Q ss_pred eCCCCCEEEEEeCCCeEEEEEcccCCc---------eeEEEec--CCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCe
Q 038802 187 SPVNGDMFVTGSYDHTVKLWDVRVENS---------KSVMEVN--HGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGK 255 (532)
Q Consensus 187 ~~~~~~~l~s~s~dg~i~iwd~~~~~~---------~~~~~~~--~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~ 255 (532)
.. ...+.+.-..||.|..|-...... ....... ....|..++.-. ...++...+|.|..|-....++
T Consensus 219 G~-g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~-~hs~alt~~G~v~~wG~n~~Gq 296 (389)
T 3kci_A 219 GS-GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS-QFSVALTKSGAVYTWGKGDYHR 296 (389)
T ss_dssp CC-SSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEET-TEEEEEETTSCEEEEECCGGGT
T ss_pred cC-CCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCC-CEEEEEeCCCeEEEEeCCCCCC
Confidence 43 335666677899999996432110 0011111 223466555542 2344555588899987532111
Q ss_pred ----------eeEEcc-CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 256 ----------MVYSME-SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 256 ----------~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
....+. .....|..++.. ....++...||.|+.|-...
T Consensus 297 LG~g~~~~~~~P~~v~~l~~~~v~~ia~G-----------~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 297 LGHGSDDHVRRPRQVQGLQGKKVIAIATG-----------SLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp TCSSSCCCEEEEEECGGGTTCCEEEEEEC-----------SSEEEEEETTCCEEEEECCT
T ss_pred CCCCCCccccCCeEeccCCCCCEEEEEec-----------cCeEEEECCCCCEEEeeCCC
Confidence 011111 112345555553 33456667889999997543
No 381
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=63.99 E-value=39 Score=33.67 Aligned_cols=62 Identities=18% Similarity=0.076 Sum_probs=44.6
Q ss_pred ccCeeEEEEcCCCCeEEEEEe------------CCeEEEEeCCCceEEEEeecc-CceeEEEEEccCCCEEEEEc
Q 038802 51 VSSINSIVFSPTTSHLFAATH------------SASLTLFSSQTLEKHSAISSF-KDVVTCSSFRPDGSLLAASD 112 (532)
Q Consensus 51 ~~~V~~i~~sp~~~~l~~~~~------------d~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~g~ 112 (532)
......|.|.++|.+.++... .+.|..++..+++....+... ...++.++|+||++.|+++-
T Consensus 475 fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 475 FNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred cCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 356788999999975553221 126777888788876666543 35789999999999888763
No 382
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=58.74 E-value=35 Score=34.24 Aligned_cols=59 Identities=20% Similarity=0.113 Sum_probs=43.0
Q ss_pred cCeeEEEEcCCCCeEEEEEeC-------------CeEEEEeCCCceEEEEeeccC-ceeEEEEEccCCCEEEEE
Q 038802 52 SSINSIVFSPTTSHLFAATHS-------------ASLTLFSSQTLEKHSAISSFK-DVVTCSSFRPDGSLLAAS 111 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~~d-------------~~v~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~g 111 (532)
+..-.|+|+|.|.+++ +... +.+.+.+..+++..+.+..+. ..++.++|+||++.|++.
T Consensus 476 ~~PDNL~fd~~G~LwI-~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 476 NSPDGLGFDKAGRLWI-LTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEE-EECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cCCcceEECCCCCEEE-EecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3457799999998444 4332 246677777888777666553 689999999999888765
No 383
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=56.60 E-value=1.3e+02 Score=28.17 Aligned_cols=155 Identities=8% Similarity=-0.024 Sum_probs=84.7
Q ss_pred CEEEEECCCC--ceEEEecCC------CCCEEEEEee---cC---CCcEEEEE-eCCCeEEEEECCCCeEEEeccCCCCc
Q 038802 116 LIQVFDVKSR--TPLRRLKSH------TRPVRFVKYP---FL---DKLHLVSG-GDDGIVKFWDVAGESVVLDLFGHKDY 180 (532)
Q Consensus 116 ~i~iwd~~~~--~~~~~~~~h------~~~i~~~~~~---~~---~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~ 180 (532)
.|.+||+.+. +.++++.-. ...+..+.+. |. ++.+++.+ +..+.|.++|+.+++..+.. |..
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~--~~~- 200 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVT--HPT- 200 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEE--CGG-
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEc--cCC-
Confidence 5788999998 888876532 3457788887 21 13343333 34678999999998877654 321
Q ss_pred eEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecC----CCEEEEEcCCeEEEEEcc-----
Q 038802 181 VRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPS----GGLIATAGGNSVKIWDLI----- 251 (532)
Q Consensus 181 v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~----~~~l~~~~d~~i~iwd~~----- 251 (532)
+.| +....++ -+|.-.- -...+..|+++|+ ++.|.-..-..-++|.+.
T Consensus 201 -----~~p-d~~~~~~--i~G~~~~---------------~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~ 257 (381)
T 3q6k_A 201 -----FKA-ERPTKFD--YGGKEYE---------------FKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELK 257 (381)
T ss_dssp -----GSC-CSCEEEE--ETTEEEE---------------ECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHS
T ss_pred -----Ccc-ccCcceE--ECCEEeE---------------eccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhh
Confidence 344 3211111 1222111 1346888999987 666666552222334332
Q ss_pred CC--CeeeEEcc--CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC
Q 038802 252 GG--GKMVYSME--SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK 304 (532)
Q Consensus 252 ~~--~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 304 (532)
+. ...+..+. +....-..+++.+.. +.++++--..+.|..|+..+
T Consensus 258 ~~~~~~~v~~~G~kg~~s~~~~~~~D~~~--------G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 258 QKGGKLNPELLGNRGKYNDAIALAYDPKT--------KVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp STTCCCCCEEEEECCTTCCEEEEEECTTT--------CEEEEEESSSSEEEEEETTS
T ss_pred CcchhhceEEeeecCCCCCcceEEEeCCC--------CeEEEEeccCCeEEEEeCCC
Confidence 11 01111111 111222344454221 56777777788999999875
No 384
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=56.08 E-value=41 Score=37.16 Aligned_cols=38 Identities=13% Similarity=0.217 Sum_probs=31.3
Q ss_pred eeEEEEEccCCCEEEEEcCCCCEEEEECCCCceEEEec
Q 038802 95 VVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLK 132 (532)
Q Consensus 95 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 132 (532)
.+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455666788899999999999999999999888754
No 385
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=53.52 E-value=38 Score=37.41 Aligned_cols=37 Identities=16% Similarity=-0.012 Sum_probs=30.1
Q ss_pred EEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEecc
Q 038802 138 VRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLF 175 (532)
Q Consensus 138 i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 175 (532)
+.+++..+ +..++++-+.|+++|+|++.+++++.+..
T Consensus 240 ~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455555 77899999999999999999999987753
No 386
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=49.04 E-value=1.5e+02 Score=26.68 Aligned_cols=230 Identities=15% Similarity=0.134 Sum_probs=121.1
Q ss_pred cCCCEEEEEcCCCCEEEEECCCCceEE---------EecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEEC---CC---
Q 038802 103 PDGSLLAASDLSGLIQVFDVKSRTPLR---------RLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDV---AG--- 167 (532)
Q Consensus 103 ~~~~~l~~g~~dg~i~iwd~~~~~~~~---------~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~---~~--- 167 (532)
|+..++++.+.+|.|+--.+.+.+... .++.+ +.+..+.... ....++..+..|.++-+.. ..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~-~~~~ll~fT~~G~~~~~~~~elp~~~~ 78 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVAN-THDHILCFSSRGRVYSMKVYQLPEATR 78 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEE-TTCEEEEEETTSEEEEEEGGGSCCCCS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEEC-CCCEEEEEECCCEEEEEEhhHCcCCCC
Confidence 345677888889988877665422111 12222 3333333333 5566777778888666554 22
Q ss_pred ---CeEEEec--cCCCCceEEEEEeC--CCCCEEEEEeCCCeEEEEEcccCC-----ceeEEEecCCCcEEEEEEe-cCC
Q 038802 168 ---ESVVLDL--FGHKDYVRCGDCSP--VNGDMFVTGSYDHTVKLWDVRVEN-----SKSVMEVNHGKPIEDVMFL-PSG 234 (532)
Q Consensus 168 ---~~~~~~~--~~~~~~v~~i~~~~--~~~~~l~s~s~dg~i~iwd~~~~~-----~~~~~~~~~~~~v~~i~~~-~~~ 234 (532)
|.++..+ ......|.++...+ .++.+++..+.+|.++-..+..-. ............+..+... .+.
T Consensus 79 ~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 79 GARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGED 158 (307)
T ss_dssp SSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTC
T ss_pred CCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCC
Confidence 2222111 12334565554432 145678899999999998775321 1112222233455554443 344
Q ss_pred CEEEEEcCCeEEEEEccCC--------CeeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCce
Q 038802 235 GLIATAGGNSVKIWDLIGG--------GKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMK 306 (532)
Q Consensus 235 ~~l~~~~d~~i~iwd~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 306 (532)
.+++...+|.+..++...- +.....+. ....|.++....+ +..+++.+..|.++-.++....
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~---------~~~ll~~T~~G~~Kr~~~~e~~ 228 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRG---------DGAILTATQNGYGKRTAVAEYP 228 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCS---------SCEEEEEETTSEEEEECGGGSC
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecC---------CCEEEEEEcCCceEEEEHHHhc
Confidence 5566666888777776421 11111222 2345656554433 3468888999999988875422
Q ss_pred E-------EEeee---cCCCeeEEEEecCCCEEEEEecCCcEEEEeec
Q 038802 307 V-------THSMR---FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRK 344 (532)
Q Consensus 307 ~-------~~~~~---~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~ 344 (532)
. +..++ ..+.+..+....+...++..+.+|.+.-+...
T Consensus 229 ~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~ 276 (307)
T 1zi0_A 229 TKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVS 276 (307)
T ss_dssp CCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGG
T ss_pred cCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEecc
Confidence 1 22222 22455554444444566677777776655554
No 387
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=48.17 E-value=2e+02 Score=27.78 Aligned_cols=147 Identities=8% Similarity=0.038 Sum_probs=75.6
Q ss_pred ceeEEEEEccCCCEEEEEcCCCCEEEEECC---CCc------------eEEEecC-CCCCEEEEEeecCCCcEEEEEeCC
Q 038802 94 DVVTCSSFRPDGSLLAASDLSGLIQVFDVK---SRT------------PLRRLKS-HTRPVRFVKYPFLDKLHLVSGGDD 157 (532)
Q Consensus 94 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~---~~~------------~~~~~~~-h~~~i~~~~~~~~~~~~l~s~s~d 157 (532)
..|..++.. ....++-..+|.|+.|-.. .++ ....+.. ....|..++. ...+.+.-..+
T Consensus 148 ~~i~~va~G--~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~---G~~hs~alt~~ 222 (473)
T 3of7_A 148 HKVVQLAAT--DNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAP---GKDHILFLDEE 222 (473)
T ss_dssp CCEEEEEEC--SSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEE---CSSEEEEEETT
T ss_pred CcEEEEEcc--CCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEe---cCCeEEEEeCC
Confidence 345555443 3344455668999999741 111 0111111 1224766665 45567777889
Q ss_pred CeEEEEECCCCeEE---------------EeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCc---------
Q 038802 158 GIVKFWDVAGESVV---------------LDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENS--------- 213 (532)
Q Consensus 158 g~i~iwd~~~~~~~---------------~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~--------- 213 (532)
|.|+.|-......+ ..+ ....|..++.- ..+.+.-+.+|.|..|=......
T Consensus 223 G~v~~wG~n~~GqLG~~~~~~~~~~~~~p~~~--~~~~v~~Ia~G---~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~ 297 (473)
T 3of7_A 223 GMVFAWGNGQQNQLGRKVMERFRLKTLDPRPF--GLRHVKYIASG---ENHCFALTKDNKLVSWGLNQFGQCGVSEDVED 297 (473)
T ss_dssp SCEEEEECCTTSTTSSCCCGGGTTTTCSCEEC--SCCSEEEEEEC---SSEEEEEETTSCEEEEEECTTSTTCCCSCCCT
T ss_pred CeEEEEeCCCCCCCCCCccccccccccCceec--CCcceEEEecC---CCeEEEEecCCCEEEeCCCCCCCcCCCCcccC
Confidence 99999965431110 000 11346666553 45556666789999996532110
Q ss_pred ---e--eEE-EecCCCcEEEEEEecCCCEEEEEcCCeEEEEEcc
Q 038802 214 ---K--SVM-EVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLI 251 (532)
Q Consensus 214 ---~--~~~-~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~ 251 (532)
. +.. .......|..++... ...++...+|.|..|-..
T Consensus 298 ~~~~~~P~~v~~~~~~~i~~ia~G~-~hs~~lt~~G~v~~wG~n 340 (473)
T 3of7_A 298 GALVTKPKRLALPDNVVIRSIAAGE-HHSLILSQDGDLYSCGRL 340 (473)
T ss_dssp TCEEEEEEECCCCTTCCEEEEEECS-SEEEEEETTSCEEEEEEC
T ss_pred CceeeccccccccCCccEEEEEeCC-CeEEEEeCCCeEEEEECC
Confidence 0 000 111224566665532 234444557888888753
No 388
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=47.80 E-value=30 Score=35.49 Aligned_cols=37 Identities=14% Similarity=0.214 Sum_probs=30.0
Q ss_pred CEEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccC
Q 038802 137 PVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFG 176 (532)
Q Consensus 137 ~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 176 (532)
.|.++.+ +..++++-+.|.++|+||+.+++++....-
T Consensus 223 ~Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE---TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc---CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555554 577999999999999999999998877643
No 389
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=43.32 E-value=77 Score=31.82 Aligned_cols=58 Identities=12% Similarity=0.119 Sum_probs=40.9
Q ss_pred EEEEEeCCCCCEEEEEeCC------------CeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEE
Q 038802 182 RCGDCSPVNGDMFVTGSYD------------HTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATA 240 (532)
Q Consensus 182 ~~i~~~~~~~~~l~s~s~d------------g~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~ 240 (532)
-.|+|+| .+++++.-..+ ..+.+.+..+++............++.++|+||++.|...
T Consensus 479 DNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4688998 88866654322 2355566666666666666678899999999999877665
No 390
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=42.20 E-value=1.7e+02 Score=25.44 Aligned_cols=143 Identities=13% Similarity=0.063 Sum_probs=79.1
Q ss_pred CeEEEEEeCCeEEEEeCCCceE-EEEeeccCceeEEEEEccCCCEEEEEcCCCCEEEEECC---C----CceEE---Eec
Q 038802 64 SHLFAATHSASLTLFSSQTLEK-HSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVK---S----RTPLR---RLK 132 (532)
Q Consensus 64 ~~l~~~~~d~~v~i~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~---~----~~~~~---~~~ 132 (532)
+.+++.+.+|.|+--....... ...+.. .+.+..+........|+..+..|.++-+... . |..+. .+.
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~~~~lke-~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~ 81 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAPGLNYKA-GDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP 81 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCSTTSCCCT-TCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC
T ss_pred CEEEEEeCCCEEEEeeCCcCCceeccCCC-CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC
Confidence 3456677788877655433110 011222 3444444444445566666778876665542 1 22111 122
Q ss_pred CCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCC-------CeEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEE
Q 038802 133 SHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAG-------ESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKL 205 (532)
Q Consensus 133 ~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~i 205 (532)
....|.++.... ++.+++.++..|.++...+.. +.....+.. .+.+..+...+.+++.++..+.+|.+..
T Consensus 82 -~~e~Iv~~~~~~-~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lr 158 (256)
T 1zvt_A 82 -PGATVDHMLMES-DDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLM 158 (256)
T ss_dssp -TTCCEEEEECCC-TTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEE
T ss_pred -CCCEEEEEEEeC-CCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEE
Confidence 234566664433 566788999999999988742 233333332 2444444444214567888889999988
Q ss_pred EEccc
Q 038802 206 WDVRV 210 (532)
Q Consensus 206 wd~~~ 210 (532)
++...
T Consensus 159 f~~~e 163 (256)
T 1zvt_A 159 FPVSD 163 (256)
T ss_dssp EEGGG
T ss_pred EEHHH
Confidence 88753
No 391
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=40.66 E-value=57 Score=33.47 Aligned_cols=38 Identities=16% Similarity=0.224 Sum_probs=30.8
Q ss_pred cCeeEEEEcCCCCeEEEEEeCCeEEEEeCCCceEEEEeec
Q 038802 52 SSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISS 91 (532)
Q Consensus 52 ~~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 91 (532)
..|.++.+. ..++++-+.|.++++||+.+++++....-
T Consensus 222 ~~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 456666654 66999999999999999999988877654
No 392
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=40.29 E-value=1.2e+02 Score=29.64 Aligned_cols=56 Identities=16% Similarity=0.088 Sum_probs=38.7
Q ss_pred ccEEEEEecCCeEEEEECC-Cce-------EEEee---ecCCCeeEEEEecCCCEEEEEecCCcEEE
Q 038802 285 QYRILSVALDGYMKVFDYG-KMK-------VTHSM---RFPAPLMSVAFSPDCMTRVIGTSNGTIFA 340 (532)
Q Consensus 285 ~~~l~s~~~dg~i~iwd~~-~~~-------~~~~~---~~~~~v~~~~~s~~~~~l~~g~~dg~i~i 340 (532)
...++.|+.+|.|.-.-+. ... .+..+ +.+.+|..|.+++++.+|++++.++.++|
T Consensus 421 ~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 421 YDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 4678889999987544332 211 11222 34579999999999999999999887665
No 393
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=39.86 E-value=2.3e+02 Score=26.28 Aligned_cols=240 Identities=12% Similarity=0.088 Sum_probs=127.2
Q ss_pred ccCCCEEEEEcCCCCEEEEECCC---------CceEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEEC---C---
Q 038802 102 RPDGSLLAASDLSGLIQVFDVKS---------RTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDV---A--- 166 (532)
Q Consensus 102 ~~~~~~l~~g~~dg~i~iwd~~~---------~~~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~---~--- 166 (532)
-|+..++++.+.+|.|+--.+.+ +..-..++ ....+..+.... ....++..+..|.++-+.. .
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~-t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVN-THDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEec-CCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 36777899999999998765421 12222333 344555555554 5566777788888766553 2
Q ss_pred ---CCeEEEec--cCCCCceEEEEEeC--CCCCEEEEEeCCCeEEEEEcccCC-----ceeEEEecCCCcEEEEEEec-C
Q 038802 167 ---GESVVLDL--FGHKDYVRCGDCSP--VNGDMFVTGSYDHTVKLWDVRVEN-----SKSVMEVNHGKPIEDVMFLP-S 233 (532)
Q Consensus 167 ---~~~~~~~~--~~~~~~v~~i~~~~--~~~~~l~s~s~dg~i~iwd~~~~~-----~~~~~~~~~~~~v~~i~~~~-~ 233 (532)
.|..+..+ ......|.++.... .++.+++.++..|.++...+.... ....+.+..+..+..+.... +
T Consensus 82 r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~ 161 (370)
T 3l6v_A 82 SNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGD 161 (370)
T ss_dssp TTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSC
T ss_pred cccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCC
Confidence 12222211 12345565555432 135689999999999988865322 12222223344555544443 3
Q ss_pred CCEEEEEcCCeEEEEEccCC--------CeeeEEccCCCcceEEEEEeccCC---------------------CC-----
Q 038802 234 GGLIATAGGNSVKIWDLIGG--------GKMVYSMESHNKTVTSVCVGRVGN---------------------ES----- 279 (532)
Q Consensus 234 ~~~l~~~~d~~i~iwd~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~---------------------~~----- 279 (532)
..+++....|.+..++...- +.....+. ....|.++...+... ..
T Consensus 162 ~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~ 240 (370)
T 3l6v_A 162 RDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLA-KGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDV 240 (370)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEECCC-----------------------------
T ss_pred ceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeC-CCCEEEEEEEecccccccccccccccccccccccccccccccc
Confidence 44555555787777775421 11111121 233455555443100 00
Q ss_pred CccccccEEEEEecCCeEEEEECCCceE-------EEeee---cCCCeeEEEEecCCCEEEEEecCCcEEEEeec
Q 038802 280 GEEAMQYRILSVALDGYMKVFDYGKMKV-------THSMR---FPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRK 344 (532)
Q Consensus 280 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~-------~~~~~---~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~ 344 (532)
.....+..+++.+..|..+...+..... +..++ ..+.+..+.+..++..++..+..|.+.-....
T Consensus 241 ~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~ 315 (370)
T 3l6v_A 241 ADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRGS 315 (370)
T ss_dssp ------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEGG
T ss_pred ccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeHh
Confidence 0000145799999999999998765332 22232 12355555444444566666777776555443
No 394
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=38.89 E-value=3.5e+02 Score=28.03 Aligned_cols=151 Identities=10% Similarity=-0.077 Sum_probs=77.7
Q ss_pred ccccCeeEEEEcCCCC-eEEEEEeCCeEEEEeCCCceEEEEeec------------cCceeEEEEEcc-CCCEEEEEcCC
Q 038802 49 GLVSSINSIVFSPTTS-HLFAATHSASLTLFSSQTLEKHSAISS------------FKDVVTCSSFRP-DGSLLAASDLS 114 (532)
Q Consensus 49 ~h~~~V~~i~~sp~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~------------~~~~v~~~~~~~-~~~~l~~g~~d 114 (532)
+-.+.|.+|+++|.++ .+++++..|.|...+ +.++.-..+.. ....+.+++++| +...++++...
T Consensus 18 g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~ 96 (763)
T 3a0f_A 18 SGGGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGD 96 (763)
T ss_dssp CBCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECS
T ss_pred cCCCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecc
Confidence 3566999999999874 566666566655543 23333222221 123589999988 33444443221
Q ss_pred -----CCEEEEEC-CCCceEEEecC-C------CCC--EEEEEeecCCCcEEEEEeCCCeEEEEECCCCeEEEeccC---
Q 038802 115 -----GLIQVFDV-KSRTPLRRLKS-H------TRP--VRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFG--- 176 (532)
Q Consensus 115 -----g~i~iwd~-~~~~~~~~~~~-h------~~~--i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--- 176 (532)
....||.. +.++.-..+.. . .+. ...++++|.+...++.++.++.|.. ..+.++.-..+..
T Consensus 97 ~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~~-S~DgG~TW~~~~~~~~ 175 (763)
T 3a0f_A 97 YVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLWR-STDRAQTWSRMNQLPD 175 (763)
T ss_dssp CTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEEE-ESSTTSSCEECTTSCC
T ss_pred cccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEEE-ECCCCcCccccccCcc
Confidence 12334443 33332222211 0 111 1357888755666766665544432 2233332222211
Q ss_pred ---CCCceEEEEEeCCCCCEEEEEeCCC
Q 038802 177 ---HKDYVRCGDCSPVNGDMFVTGSYDH 201 (532)
Q Consensus 177 ---~~~~v~~i~~~~~~~~~l~s~s~dg 201 (532)
....+..+.++|.++..++.+..++
T Consensus 176 ~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 176 SSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred cCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 1134778889886666666666654
No 395
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=35.81 E-value=1.5e+02 Score=29.50 Aligned_cols=61 Identities=10% Similarity=0.055 Sum_probs=40.2
Q ss_pred ceEEEEEeCCCCCEEEEEeC------------CCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEc
Q 038802 180 YVRCGDCSPVNGDMFVTGSY------------DHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAG 241 (532)
Q Consensus 180 ~v~~i~~~~~~~~~l~s~s~------------dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 241 (532)
....+.|.+ ++.+.++... ...+..++..+++............++.++|+||++.|.++-
T Consensus 477 sPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 345788988 7887773221 114666666665554544434457789999999999877653
No 396
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=33.67 E-value=1.2e+02 Score=30.14 Aligned_cols=56 Identities=11% Similarity=0.044 Sum_probs=39.4
Q ss_pred ccEEEEEecCCeEEEEECCCc----eEEEeee---cCCCee-EEEEecCCCEEEEEecCCcEEE
Q 038802 285 QYRILSVALDGYMKVFDYGKM----KVTHSMR---FPAPLM-SVAFSPDCMTRVIGTSNGTIFA 340 (532)
Q Consensus 285 ~~~l~s~~~dg~i~iwd~~~~----~~~~~~~---~~~~v~-~~~~s~~~~~l~~g~~dg~i~i 340 (532)
...++.|+.+|.|.-..+... ..+..+. ...+|. .|.+++++.+|++++.++.++|
T Consensus 413 ~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 413 YSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 567888999998765554321 2333333 246885 9999999999999998876655
No 397
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=32.18 E-value=3.2e+02 Score=25.56 Aligned_cols=191 Identities=14% Similarity=0.134 Sum_probs=98.0
Q ss_pred CCEEEEEeecCCCcEEEEEeCC-CeEEEEECCCC------------eEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCe
Q 038802 136 RPVRFVKYPFLDKLHLVSGGDD-GIVKFWDVAGE------------SVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHT 202 (532)
Q Consensus 136 ~~i~~~~~~~~~~~~l~s~s~d-g~i~iwd~~~~------------~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~ 202 (532)
..|..++. ...+.+.-..| +.|+.|-.... .+..........|..++.- ..+.+.-..||.
T Consensus 68 ~~i~~va~---G~~ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G---~~h~~alt~~G~ 141 (406)
T 4d9s_A 68 HQIVSVTC---GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG---DSHCLAVTMEGE 141 (406)
T ss_dssp SCEEEEEE---CSSEEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC---SSEEEEEETTSC
T ss_pred CCEEEEEe---CcceEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEC---hhheEEEcCCCc
Confidence 35777765 33344444455 59999954321 1111111123356666653 455666678999
Q ss_pred EEEEEcccCCc--------ee-EEEec--CCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCe----------eeEEcc
Q 038802 203 VKLWDVRVENS--------KS-VMEVN--HGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGK----------MVYSME 261 (532)
Q Consensus 203 i~iwd~~~~~~--------~~-~~~~~--~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~----------~~~~~~ 261 (532)
|+.|-...... .. ..... ....|..++... ...++...+|.|..|-....++ ....+.
T Consensus 142 v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~-~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~ 220 (406)
T 4d9s_A 142 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGA-EHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVT 220 (406)
T ss_dssp EEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECS-SEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECC
T ss_pred EEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecCC-CeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEec
Confidence 99996543111 00 01111 223566655432 2344444588899996433211 111111
Q ss_pred -CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCCc-----------eEEEeee--cCCCeeEEEEecCCC
Q 038802 262 -SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKM-----------KVTHSMR--FPAPLMSVAFSPDCM 327 (532)
Q Consensus 262 -~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----------~~~~~~~--~~~~v~~~~~s~~~~ 327 (532)
.....|..++.. ....+....+|.|+.|-.... .....+. ....|..++.. ..
T Consensus 221 ~~~~~~i~~va~G-----------~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G--~~ 287 (406)
T 4d9s_A 221 STGGEKMSMVACG-----------WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGG--WR 287 (406)
T ss_dssp CSTTCCEEEEEEC-----------SSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SS
T ss_pred ccCCceEEEEEEC-----------CCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEec--CC
Confidence 112345555553 335666678999999964431 1111111 12235555543 34
Q ss_pred EEEEEecCCcEEEEeecCc
Q 038802 328 TRVIGTSNGTIFAGRRKKK 346 (532)
Q Consensus 328 ~l~~g~~dg~i~iw~~~~~ 346 (532)
..++-+.||.|+.|-.+..
T Consensus 288 hs~alt~~G~v~~wG~n~~ 306 (406)
T 4d9s_A 288 HTMALTSDGKLYGWGWNKF 306 (406)
T ss_dssp EEEEEETTSCEEEEECCTT
T ss_pred EEEEEcCCCeEEEeeCCCC
Confidence 5566678999999987654
No 398
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=30.25 E-value=60 Score=19.77 Aligned_cols=26 Identities=23% Similarity=0.312 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHH
Q 038802 497 HIRNLKRSVEEEIRIQQSLQEIQGII 522 (532)
Q Consensus 497 ~~~~l~~~~~~~~~~~~~l~~~~g~l 522 (532)
.|+..-...++|+.++++|++-.|.|
T Consensus 22 ~Le~~c~~~eQEieRL~~LLkqHgll 47 (48)
T 3vmx_A 22 HLEFSCSEKEQEIERLNKLLKQNGLL 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHccHHHHHHHHHHHHHHHcCCC
Confidence 35566677889999999999988754
No 399
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=28.88 E-value=3.6e+02 Score=25.14 Aligned_cols=190 Identities=12% Similarity=0.058 Sum_probs=103.5
Q ss_pred cccCeeEEEEcCCCCeEEEEEe---------------CCeEEEEeCCCc--eEEEEeecc------CceeEEEEEc---c
Q 038802 50 LVSSINSIVFSPTTSHLFAATH---------------SASLTLFSSQTL--EKHSAISSF------KDVVTCSSFR---P 103 (532)
Q Consensus 50 h~~~V~~i~~sp~~~~l~~~~~---------------d~~v~i~~~~~~--~~~~~~~~~------~~~v~~~~~~---~ 103 (532)
+--.|..+...+++.+-+.=+. ...|.+||+.+. +.++++.-. ...+..+.+. |
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANP 164 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCT
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccC
Confidence 3447888888887763332111 126889999999 888877542 3457788877 2
Q ss_pred C----CCEEEEE-cCCCCEEEEECCCCceEEEecC----C--------------CCCEEEEEeecCC----CcEEEEEeC
Q 038802 104 D----GSLLAAS-DLSGLIQVFDVKSRTPLRRLKS----H--------------TRPVRFVKYPFLD----KLHLVSGGD 156 (532)
Q Consensus 104 ~----~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~----h--------------~~~i~~~~~~~~~----~~~l~s~s~ 156 (532)
+ +.++..+ +..+-|.|+|+.+++.-+.... . ...+..++.+| + +..|+-..-
T Consensus 165 ~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp-~~~~~~~~LYf~pl 243 (381)
T 3q6k_A 165 KGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGD-RDSEGNRPAYYLAG 243 (381)
T ss_dssp TTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECC-CCTTSCCEEEEEES
T ss_pred CCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecC-CcCCCCeEEEEEEC
Confidence 2 3344444 3467799999998876554421 0 13567777777 3 344444443
Q ss_pred CCeEEEEECC-----CC---eEEEec--cCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEccc-CC---c-eeEEEecC
Q 038802 157 DGIVKFWDVA-----GE---SVVLDL--FGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRV-EN---S-KSVMEVNH 221 (532)
Q Consensus 157 dg~i~iwd~~-----~~---~~~~~~--~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~-~~---~-~~~~~~~~ 221 (532)
.+. ++|.+. +. ..+..+ ++....-..+++.+.+|.++++--....|..|+..+ .- . ..+.....
T Consensus 244 ss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~ 322 (381)
T 3q6k_A 244 SAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSR 322 (381)
T ss_dssp SCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTT
T ss_pred CCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCC
Confidence 331 222221 11 111111 111122234556543677777777788899999875 11 1 11222122
Q ss_pred CCcEEEEEEecCCCEEEEEc
Q 038802 222 GKPIEDVMFLPSGGLIATAG 241 (532)
Q Consensus 222 ~~~v~~i~~~~~~~~l~~~~ 241 (532)
-.-...+.+.++|.+.+.+.
T Consensus 323 l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 323 FVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp CCSEEEEEECTTSCEEEEEC
T ss_pred ccccCeEEECCCCeEEEEEC
Confidence 22356666666665544443
No 400
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=26.93 E-value=4.3e+02 Score=25.34 Aligned_cols=192 Identities=14% Similarity=0.060 Sum_probs=99.7
Q ss_pred CCEEEEEeecCCCcEEEEEeCCCeEEEEECC---CCe------------EEEeccC-CCCceEEEEEeCCCCCEEEEEeC
Q 038802 136 RPVRFVKYPFLDKLHLVSGGDDGIVKFWDVA---GES------------VVLDLFG-HKDYVRCGDCSPVNGDMFVTGSY 199 (532)
Q Consensus 136 ~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~---~~~------------~~~~~~~-~~~~v~~i~~~~~~~~~l~s~s~ 199 (532)
..|..++. ...+.+.-..||.|+.|-.. .++ ....+.. ....|..++.- ..+.+.-+.
T Consensus 148 ~~i~~va~---G~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G---~~hs~alt~ 221 (473)
T 3of7_A 148 HKVVQLAA---TDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPG---KDHILFLDE 221 (473)
T ss_dssp CCEEEEEE---CSSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEEC---SSEEEEEET
T ss_pred CcEEEEEc---cCCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEec---CCeEEEEeC
Confidence 45666665 44556666789999999751 111 0111111 12246666653 456666678
Q ss_pred CCeEEEEEcccCCce-------------eEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCee----------
Q 038802 200 DHTVKLWDVRVENSK-------------SVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKM---------- 256 (532)
Q Consensus 200 dg~i~iwd~~~~~~~-------------~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~---------- 256 (532)
+|.|..|-....... ..... ....|..|+.- ....++...+|.|..|-....+++
T Consensus 222 ~G~v~~wG~n~~GqLG~~~~~~~~~~~~~p~~~-~~~~v~~Ia~G-~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~ 299 (473)
T 3of7_A 222 EGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPF-GLRHVKYIASG-ENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGA 299 (473)
T ss_dssp TSCEEEEECCTTSTTSSCCCGGGTTTTCSCEEC-SCCSEEEEEEC-SSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTC
T ss_pred CCeEEEEeCCCCCCCCCCccccccccccCceec-CCcceEEEecC-CCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCc
Confidence 999999965321110 00001 11356665543 233445555888888875432110
Q ss_pred ----eEEcc-CCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC-c-------------------eE--E-
Q 038802 257 ----VYSME-SHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK-M-------------------KV--T- 308 (532)
Q Consensus 257 ----~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~-------------------~~--~- 308 (532)
...+. .....|..++... ...+....||.|+.|-... + .. .
T Consensus 300 ~~~~P~~v~~~~~~~i~~ia~G~-----------~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~ 368 (473)
T 3of7_A 300 LVTKPKRLALPDNVVIRSIAAGE-----------HHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVP 368 (473)
T ss_dssp EEEEEEECCCCTTCCEEEEEECS-----------SEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEE
T ss_pred eeeccccccccCCccEEEEEeCC-----------CeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeec
Confidence 11111 1123455655532 3455557789999996432 0 00 0
Q ss_pred EeeecCC--CeeEEEEecCCCEEEEEecCCcEEEEeecCccc
Q 038802 309 HSMRFPA--PLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKEN 348 (532)
Q Consensus 309 ~~~~~~~--~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~ 348 (532)
....... .|..++.. ....++-+.+|.|+.|-....-.
T Consensus 369 ~P~~v~~~~~v~~Ia~G--~~hs~al~~~G~vy~wG~n~~Gq 408 (473)
T 3of7_A 369 LPTKLNNVPKFKSVAAG--SHHSVAVAQNGIAYSWGFGETYA 408 (473)
T ss_dssp EEEECCSSCCEEEEEEC--SSEEEEEETTSCEEEEECCTTCT
T ss_pred cCcccCCCCceEEEEeC--CCeEEEEeCCCcEEEeeCCCCCC
Confidence 1111111 45555544 34555668899999998765433
No 401
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=26.08 E-value=2.8e+02 Score=24.05 Aligned_cols=21 Identities=19% Similarity=0.191 Sum_probs=12.7
Q ss_pred chhHHHhhcccchHHHHHHhh
Q 038802 400 LGEHDKLLKKFRHKEALVSVL 420 (532)
Q Consensus 400 ~~~~~~~l~~~~~~~al~~al 420 (532)
..++...+++-+.++|...|.
T Consensus 9 ~~~lre~L~sWkiK~a~ela~ 29 (265)
T 3b2a_A 9 KTELRELVLSWQILDAVSLAL 29 (265)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHH
Confidence 345556666666666665555
No 402
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=25.95 E-value=3.8e+02 Score=24.45 Aligned_cols=98 Identities=11% Similarity=0.033 Sum_probs=54.6
Q ss_pred HHHhhcccchHHHHHHhhC-------CCCChhHHHHHHHHHhhchHHHHhcCCChHhHHHHHHHHHhccC-CCCchHHHH
Q 038802 403 HDKLLKKFRHKEALVSVLN-------GKNPENVVAVMEELVARKKLMKCVSNLDNEELGLLLSFMQKHST-VPRYSGLLI 474 (532)
Q Consensus 403 ~~~~l~~~~~~~al~~al~-------~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~ll~~~~~~~~-~~~~~~~~~ 474 (532)
+.+.+++.+|.+|+++... .++......+..-++ +.++.+=...+++.+.+|.+.+...-. .|....++.
T Consensus 42 ~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llv--evy~~~~~~~~~~~~~rL~~L~~~~~~~~p~r~~fi~ 119 (336)
T 3lpz_A 42 AARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLV--DTFRQAGQRVDGASRGKLLGCLRLFQPGEPVRKRFVK 119 (336)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH--HHHHHHTCCCCHHHHHHHHHHHTTSCTTCHHHHHHHH
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHH--HHHHHcCCCCCHHHHHHHHHHHHhCCCCCcHHHHHHH
Confidence 4567777788888875442 233323333322222 345555455667777777777765442 344455555
Q ss_pred HHHHHHHHhccccccccHHHHHHHHHHHH
Q 038802 475 GLMEKVLEMRAKDIRTCDALKGHIRNLKR 503 (532)
Q Consensus 475 ~~~~~il~~~~~~~~~~~~l~~~~~~l~~ 503 (532)
..+.+--+ ++..-.-.|+|+.++..+.-
T Consensus 120 ~ai~WS~~-~g~~~~Gdp~LH~~ig~~~~ 147 (336)
T 3lpz_A 120 EMIDWSKK-FGDYPAGDPELHHVVGTLYV 147 (336)
T ss_dssp HHHHHHHH-HSSCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHhh-cCCCCCCCHHHHHHHHHHHH
Confidence 55555443 44444456888887766654
No 403
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 3.00A {Escherichia coli}
Probab=25.88 E-value=5.5e+02 Score=26.26 Aligned_cols=147 Identities=12% Similarity=-0.010 Sum_probs=0.0
Q ss_pred CCCCCEEEEEeCCCeEEEEEcccCCceeEEEecCCCcEEEEEEecCCCEEEEEcCCeEEEEEc------cCCCeeeEEc-
Q 038802 188 PVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDL------IGGGKMVYSM- 260 (532)
Q Consensus 188 ~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~------~~~~~~~~~~- 260 (532)
+ +....++-+.+|.|+--.-...............-...+..+....+++..+.|.++-... +..+.++..+
T Consensus 470 ~-~e~v~v~ls~~GyiKr~~g~~~~~~~~~~k~~D~~~~~~~~~t~d~ll~ft~~Gr~y~~~~~~lP~~~~~G~~i~~ll 548 (716)
T 1zvu_A 470 P-SEPVTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKL 548 (716)
T ss_dssp C-CCCCCEEEETTTEEEECCC---------------CCEEECCCSSSCEEEEETTSEEEEECTTTSCCCC---CBSTTTS
T ss_pred C-CceEEEEEecCCeEeccCCCCcCccccccCCCCeEEEEEEecCCCEEEEEecCCcEEEEEeeecccccccCeeHHhcc
Q ss_pred -cCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC-------ceEEEeeecCCCeeEEEEe-cCCCEEEE
Q 038802 261 -ESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK-------MKVTHSMRFPAPLMSVAFS-PDCMTRVI 331 (532)
Q Consensus 261 -~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-------~~~~~~~~~~~~v~~~~~s-~~~~~l~~ 331 (532)
-.....|..+....+ ..+++.++..|.++...+.. +...-.++....+..+... ..+..++.
T Consensus 549 ~l~~~e~i~~~~~~~~---------~~~l~~~T~~G~vk~~~l~~~~~~~~~g~~ai~L~~~d~lv~~~~~~~~~~~v~l 619 (716)
T 1zvu_A 549 TLPPGATVDHMLMESD---------DQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLA 619 (716)
T ss_dssp CCCTTCCEEEEECCCT---------TCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEE
T ss_pred CCCCCCeEEEEEEecC---------CceEEEEeCCceEEEecHHHhcccCccceEEEeeCCCCEEEEEEEecCCCCEEEE
Q ss_pred EecCCcEEEEeec
Q 038802 332 GTSNGTIFAGRRK 344 (532)
Q Consensus 332 g~~dg~i~iw~~~ 344 (532)
.+.+|....|...
T Consensus 620 ~t~~g~~lrf~~~ 632 (716)
T 1zvu_A 620 ITQAGRMLMFPVS 632 (716)
T ss_dssp EETTSEEEEEEST
T ss_pred EeCCCeEEEEEHH
No 404
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=25.71 E-value=2.6e+02 Score=22.51 Aligned_cols=27 Identities=11% Similarity=0.122 Sum_probs=13.4
Q ss_pred HHHHHhhCCCCCh---hHHHHHHHHHhhch
Q 038802 414 EALVSVLNGKNPE---NVVAVMEELVARKK 440 (532)
Q Consensus 414 ~al~~al~~~~~~---~~~~~~~~l~~~~~ 440 (532)
.||..-+..++|. .++.+++.+.+..+
T Consensus 53 ral~krl~~~n~~vql~AL~LLd~~vkNCG 82 (171)
T 1juq_A 53 RLLAHKIQSPQEWEALQALTVLEACMKNCG 82 (171)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHSH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHcC
Confidence 3344444445552 44555666666533
No 405
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=25.36 E-value=4.2e+02 Score=24.77 Aligned_cols=229 Identities=14% Similarity=0.016 Sum_probs=117.3
Q ss_pred CeeEEEEcCCCCeEEEEEeCCeEEEEeCCC-ce------------EEEEeeccCceeEEEEEccCCCEEEEEcCCCCEEE
Q 038802 53 SINSIVFSPTTSHLFAATHSASLTLFSSQT-LE------------KHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQV 119 (532)
Q Consensus 53 ~V~~i~~sp~~~~l~~~~~d~~v~i~~~~~-~~------------~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~i 119 (532)
.|..|+.. +.+.++.+.||.|+.|-... ++ ....+. ....|..++.. ..+.++-..||.|+.
T Consensus 76 ~v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~G--~~hs~al~~~G~v~~ 150 (423)
T 3mvd_K 76 DAVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALCISAG--DSHSACLLEDGRVFA 150 (423)
T ss_dssp SEEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEEC--SSEEEEEETTSCEEE
T ss_pred CceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEcC--cCeEEEEeCCCeEEE
Confidence 35555543 44677778899999995422 11 011111 12345555443 334455567899999
Q ss_pred EEC--CC-Cce---------EEEecCCCCCEEEEEeecCCCcEEEEEeCCCeEEEEECCCC-------------------
Q 038802 120 FDV--KS-RTP---------LRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGE------------------- 168 (532)
Q Consensus 120 wd~--~~-~~~---------~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~------------------- 168 (532)
|-. .. ++. ..........|..++. ...+.+.-..||.|+.|-....
T Consensus 151 wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~---G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~ 227 (423)
T 3mvd_K 151 WGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIAS---GADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGK 227 (423)
T ss_dssp EECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEE---CSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTT
T ss_pred EeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEec---CCCeEEEEecCCeEEEeeCCcCCccCCCccccccccccccc
Confidence 975 22 211 1111122345666665 4556677778999999964321
Q ss_pred ----eEEEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCc--------e---eEEEecCCCcEEEEEEecC
Q 038802 169 ----SVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENS--------K---SVMEVNHGKPIEDVMFLPS 233 (532)
Q Consensus 169 ----~~~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~--------~---~~~~~~~~~~v~~i~~~~~ 233 (532)
.+..........|..++... ...++.-+.||.|..|-...... . ...... ...|..++.- .
T Consensus 228 ~~~~~p~~v~~~~~~~v~~i~~g~--~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~-~~~v~~ia~G-~ 303 (423)
T 3mvd_K 228 RDLLRPTQLIITRAKPFEAIWATN--YCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTE-LKDIRHIAGG-Q 303 (423)
T ss_dssp TTTSSCEEECCTTCCCEEEEEEET--TEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEEC-CCSEEEEEEC-S
T ss_pred ccccCCeEEeecCCccEEEEEECC--cEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcC-CCCeEEEEcc-c
Confidence 11111111223455555542 22333336788898886443110 0 001111 3456655543 2
Q ss_pred CCEEEEEcCCeEEEEEccCCC-----------eeeEEccCCCcceEEEEEeccCCCCCccccccEEEEEecCCeEEEEEC
Q 038802 234 GGLIATAGGNSVKIWDLIGGG-----------KMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDY 302 (532)
Q Consensus 234 ~~~l~~~~d~~i~iwd~~~~~-----------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 302 (532)
...++...+|.|..|-....+ .....+..-...|..++... ...++...||.|+.|=.
T Consensus 304 ~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~-----------~hs~alt~~G~v~~wG~ 372 (423)
T 3mvd_K 304 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGE-----------VCSYAVTIDGKLYSWGS 372 (423)
T ss_dssp SEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEET-----------TEEEEEETTSCEEEEEC
T ss_pred CeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCC-----------CeEEEEcCCCCEEEECC
Confidence 234555558889998643211 11122222223566666543 34555578999999965
Q ss_pred CC
Q 038802 303 GK 304 (532)
Q Consensus 303 ~~ 304 (532)
..
T Consensus 373 n~ 374 (423)
T 3mvd_K 373 GV 374 (423)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 406
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=25.09 E-value=2.1e+02 Score=21.06 Aligned_cols=25 Identities=20% Similarity=0.141 Sum_probs=14.1
Q ss_pred EEEEccCCCEEEEEcCCCCEEEEECCC
Q 038802 98 CSSFRPDGSLLAASDLSGLIQVFDVKS 124 (532)
Q Consensus 98 ~~~~~~~~~~l~~g~~dg~i~iwd~~~ 124 (532)
.+.+..+|++++... ++.+ +|...+
T Consensus 60 ~l~l~~dGNLVl~d~-~~~~-iW~S~t 84 (113)
T 3mez_B 60 FMRLGHSGELDITDD-RLNT-VFVSNT 84 (113)
T ss_dssp EEEECTTSCEEEECT-TSCE-EEECSC
T ss_pred EEEEeCCCcEEEECC-CCCE-EEECCC
Confidence 456667777666543 3443 676443
No 407
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=24.41 E-value=5.9e+02 Score=26.13 Aligned_cols=105 Identities=12% Similarity=0.042 Sum_probs=58.0
Q ss_pred eeEEEEEccC-CCEEEEEcCCCCEEEEECCCCceEEEecCC-------CCCEEEEEeecCCCcEEEEEeCC-------Ce
Q 038802 95 VVTCSSFRPD-GSLLAASDLSGLIQVFDVKSRTPLRRLKSH-------TRPVRFVKYPFLDKLHLVSGGDD-------GI 159 (532)
Q Consensus 95 ~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h-------~~~i~~~~~~~~~~~~l~s~s~d-------g~ 159 (532)
.|..++++|. ...++++...|.|...+ ..++.-..+..+ ...|.+++++|.+.+.++.+... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 7899999995 35666677666665554 233333333322 24689999998555555555421 12
Q ss_pred EEEEEC-CCCe---EEEe-cc--CC---CCceEEEEEeCCCCCEEEEEeCC
Q 038802 160 VKFWDV-AGES---VVLD-LF--GH---KDYVRCGDCSPVNGDMFVTGSYD 200 (532)
Q Consensus 160 i~iwd~-~~~~---~~~~-~~--~~---~~~v~~i~~~~~~~~~l~s~s~d 200 (532)
..+|-- +.++ .+.. +. .+ ...+.+++++|.+++.++.+...
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 334433 3332 2221 11 00 11246789998777777777643
No 408
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=23.17 E-value=1.8e+02 Score=29.56 Aligned_cols=55 Identities=16% Similarity=0.145 Sum_probs=37.9
Q ss_pred cEEEEEecCCeEE-EEECCCc-----e--EE---EeeecCCCeeEEEEecCCCEEEEEecCCcEEE
Q 038802 286 YRILSVALDGYMK-VFDYGKM-----K--VT---HSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFA 340 (532)
Q Consensus 286 ~~l~s~~~dg~i~-iwd~~~~-----~--~~---~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i 340 (532)
..++.|+.+|.|. +...... + .+ ..+..+.+|..|.++++++.|++++.++.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 5678888899864 3322211 1 22 22345678999999999999999999886665
No 409
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=20.62 E-value=5.2e+02 Score=24.06 Aligned_cols=230 Identities=14% Similarity=0.083 Sum_probs=120.2
Q ss_pred ceeEEEEEccCCCEEEEEcCCCCEEEEECCCC-c------------eEEEecCCCCCEEEEEeecCCCcEEEEEeCCCeE
Q 038802 94 DVVTCSSFRPDGSLLAASDLSGLIQVFDVKSR-T------------PLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIV 160 (532)
Q Consensus 94 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~-~------------~~~~~~~h~~~i~~~~~~~~~~~~l~s~s~dg~i 160 (532)
..|..++-. ..+.+.-..||.|+.|-.... + ....+ .-...|..++. ...+.+.-..||.|
T Consensus 59 ~~i~~va~G--~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v-~l~~~i~~va~---G~~hs~alt~~G~v 132 (413)
T 1a12_A 59 EDVVQAEAG--GMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-ELQEKVVQVSA---GDSHTAALTDDGRV 132 (413)
T ss_dssp SCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEEC-CCCSCEEEEEE---CSSEEEEEETTSCE
T ss_pred CCeEEEEeC--CCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEe-cCCCcEEEEec---CCCeEEEEcCCCcE
Confidence 445555443 334444556888888865321 1 01111 11335666665 45566777889999
Q ss_pred EEEEC--CC-CeE-----------EEeccCCCCceEEEEEeCCCCCEEEEEeCCCeEEEEEcccCCc-------------
Q 038802 161 KFWDV--AG-ESV-----------VLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENS------------- 213 (532)
Q Consensus 161 ~iwd~--~~-~~~-----------~~~~~~~~~~v~~i~~~~~~~~~l~s~s~dg~i~iwd~~~~~~------------- 213 (532)
+.|-. .. ++. ...+ .....|..++.- ..+.+.-+.||.|..|=......
T Consensus 133 ~~wG~~~n~~GqlG~~~~~~~~~~P~~v-~~~~~i~~ia~G---~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~ 208 (413)
T 1a12_A 133 FLWGSFRDNNGVIGLLEPMKKSMVPVQV-QLDVPVVKVASG---NDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGG 208 (413)
T ss_dssp EEEECEEETTEEEESSBBTBCEEEEEEE-CCSSCEEEEEEC---SSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCG
T ss_pred EEeeCCcCCCCccCcCCccccccCCEEe-cCCCCEEEEEec---CceEEEEcCCCCEEEeeCCCCCccCCCccccccccc
Confidence 99975 21 110 1111 123456666553 35566667889999996532110
Q ss_pred --------ee-EEEec-----CCCcEEEEEEecCCCEEEEEcCCeEEEEEccCCCee----------eEEcc---CCCcc
Q 038802 214 --------KS-VMEVN-----HGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKM----------VYSME---SHNKT 266 (532)
Q Consensus 214 --------~~-~~~~~-----~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~----------~~~~~---~~~~~ 266 (532)
.+ ..... ....|..++.... ..++...+|.|..|-....+++ ...+. .....
T Consensus 209 ~~~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G~~-hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~ 287 (413)
T 1a12_A 209 RQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAY-FTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKS 287 (413)
T ss_dssp GGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETT-EEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCC
T ss_pred cccccccccCceEeeccccccCCccEEEEEeCCC-EEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCce
Confidence 00 01111 2245666665433 3445556888999975432110 11111 11123
Q ss_pred eEEEEEeccCCCCCccccccEEEEEecCCeEEEEECCC------c----e--EEEeeecCCCeeEEEEecCCCEEEEEec
Q 038802 267 VTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGK------M----K--VTHSMRFPAPLMSVAFSPDCMTRVIGTS 334 (532)
Q Consensus 267 i~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~------~----~--~~~~~~~~~~v~~~~~s~~~~~l~~g~~ 334 (532)
|..++.. ....+.-..||.|+.|-... + . ....+.....|..++.. ....++-+.
T Consensus 288 v~~ia~G-----------~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~l~~v~~v~~G--~~hs~alt~ 354 (413)
T 1a12_A 288 WVGFSGG-----------QHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACG--ASVGYAVTK 354 (413)
T ss_dssp EEEEEEC-----------SSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCSSSSEEEEEEC--SSEEEEEET
T ss_pred EEEEecc-----------cceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecccCceeEEEEC--cceEEEEeC
Confidence 5555543 23455667799999996532 1 1 11112222356666654 345566678
Q ss_pred CCcEEEEeecCcc
Q 038802 335 NGTIFAGRRKKKE 347 (532)
Q Consensus 335 dg~i~iw~~~~~~ 347 (532)
||.|+.|-....-
T Consensus 355 ~G~v~~wG~n~~g 367 (413)
T 1a12_A 355 DGRVFAWGMGTNY 367 (413)
T ss_dssp TSCEEEEECCTTS
T ss_pred CCCEEEecCCCCC
Confidence 9999999876543
Done!