Citrus Sinensis ID: 038802

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530--
MAIANDSQQPTTVSKNFPVKPKLKPKPRNLSQTPESKYWSSFKPHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENVESGIENFWSLGRVETQKPMLRPTYFRYFQRGQSDKPSEGDYLVVRPKKLKLGEHDKLLKKFRHKEALVSVLNGKNPENVVAVMEELVARKKLMKCVSNLDNEELGLLLSFMQKHSTVPRYSGLLIGLMEKVLEMRAKDIRTCDALKGHIRNLKRSVEEEIRIQQSLQEIQGIISPLLRIAGKR
ccccccccccEEEEcccccccccccccccccccccEEEEccccccccccccccEEEEEEcccccEEEEECccccEEEEEcccccEEEccccccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEEccccccEEEEEEccccccEEEEECcccEEEEEEccccEEEEEcccccccEEEEEEccccccEEEEEcccccEEEEEcccccEEEEccccccccEEEEEEcccccEEEECcccEEEEEEcccccEEEEEcccccccEEEEEEccccccccccccccEEEEEEccccEEEEEcccccEEEcccccccEEEEEEcccccEEEEEcccccEEEEEcccccccccccccEEccccccccccEEcccccCEEEccccccccccEEEECccEEEccccHHcccccccccccEEEEEEcccccEEEEEEcHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
*A***********SKNFPVKPK**************KYWSSFKPHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENVESGIENFWSLGRVETQKPMLRPTYFRYFQRGQSDKPSEGDYLVVRPKKLKLGEHDKLLKKFRHKEALVSVLNGKNPENVVAVMEELVARKKLMKCVSNLDNEELGLLLSFMQKHSTVPRYSGLLIGLMEKVLEMRAKDIRTCDALKGHIRNLKRSVEEEIRIQQSLQEIQGIISPLLRIA***
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MAIANDSQQPTTVSKNFPVKPKLKPKPRNLSQTPESKYWSSFKPHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPDGSLLAASDLSGLIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMVYSMESHNKTVTSVCVGRVGNESGEEAMQYRILSVALDGYMKVFDYGKMKVTHSMRFPAPLMSVAFSPDCMTRVIGTSNGTIFAGRRKKKENVESGIENFWSLGRVETQKPMLRPTYFRYFQRGQSDKPSEGDYLVVRPKKLKLGEHDKLLKKFRHKEALVSVLNGKNPENVVAVMEELVARKKLMKCVSNLDNEELGLLLSFMQKHSTVPRYSGLLIGLMEKVLEMRAKDIRTCDALKGHIRNLKRSVEEEIRIQQSLQEIQGIISPLLRIAGKR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
U3 small nucleolar RNA-associated protein 15 homolog Involved in nucleolar processing of pre-18S ribosomal RNA.probableA2RRU3
U3 small nucleolar RNA-associated protein 15 homolog Involved in nucleolar processing of pre-18S ribosomal RNA.probableQ8TED0
U3 small nucleolar RNA-associated protein 15 homolog Involved in nucleolar processing of pre-18S ribosomal RNA.probableQ5F3D7

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2YMU, chain A
Confidence level:very confident
Coverage over the Query: 31-345
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Template: 1W6S, chain A
Confidence level:confident
Coverage over the Query: 63-349
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Template: 1XI4, chain A
Confidence level:probable
Coverage over the Query: 72-355,369-422
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Template: 3ZEY, chain 7
Confidence level:probable
Coverage over the Query: 8-250
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Template: 1K8K, chain G
Confidence level:probable
Coverage over the Query: 398-485
View the alignment between query and template
View the model in PyMOL