BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 038803
         (83 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6NXH8|MET25_MOUSE Methyltransferase-like protein 25 OS=Mus musculus GN=Mettl25 PE=2
           SV=1
          Length = 597

 Score = 31.2 bits (69), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 1   MGNCQAAEAATVVIQHPGNKIERIYWSVSAIEIMNSNPGHYVALLA 46
           +G C  +E     +Q  GNK +R+  +V AIE MN+   H V  ++
Sbjct: 112 LGLCTPSEQLLTALQ--GNKRQRVDENVKAIEFMNTKKSHEVQAMS 155


>sp|Q20296|HDA6_CAEEL Histone deacetylase 6 OS=Caenorhabditis elegans GN=hda-6 PE=2 SV=2
          Length = 955

 Score = 30.8 bits (68), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 15/28 (53%), Positives = 17/28 (60%)

Query: 31  IEIMNSNPGHYVALLATSPTLKSENGLP 58
           +EIM+S P H V  LAT P LK    LP
Sbjct: 838 LEIMDSGPAHAVVPLATCPHLKEVKPLP 865


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.134    0.391 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,665,491
Number of Sequences: 539616
Number of extensions: 1021503
Number of successful extensions: 2100
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2099
Number of HSP's gapped (non-prelim): 3
length of query: 83
length of database: 191,569,459
effective HSP length: 54
effective length of query: 29
effective length of database: 162,430,195
effective search space: 4710475655
effective search space used: 4710475655
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)