Query 038806
Match_columns 162
No_of_seqs 105 out of 236
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 05:09:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038806.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038806hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mxz_A Tubulin-specific chaper 100.0 1.5E-38 5.1E-43 242.1 11.7 113 50-162 3-116 (116)
2 1h7c_A Tubulin-specific chaper 100.0 2.7E-36 9.1E-41 226.8 11.2 105 51-156 3-107 (108)
3 1qsd_A Protein (beta-tubulin b 100.0 4.6E-36 1.6E-40 225.1 11.6 104 51-159 1-105 (106)
4 4e81_A Chaperone protein DNAK; 89.3 7.2 0.00025 31.2 12.8 83 63-153 123-206 (219)
5 4b9q_A Chaperone protein DNAK; 78.8 29 0.00099 31.2 12.2 83 63-153 511-594 (605)
6 1u00_A HSC66, chaperone protei 62.8 55 0.0019 25.8 12.9 85 62-154 119-204 (227)
7 2kho_A Heat shock protein 70; 59.1 93 0.0032 27.9 11.0 84 62-153 510-594 (605)
8 2p32_A Heat shock 70 kDa prote 56.8 44 0.0015 23.7 7.0 44 110-155 42-85 (120)
9 3he4_B Synzip5; heterodimeric 53.5 17 0.0006 22.8 3.7 24 67-90 4-27 (46)
10 3lof_A Heat shock 70 kDa prote 51.0 60 0.002 22.6 8.2 42 110-153 33-74 (113)
11 1s35_A Beta-I spectrin, spectr 49.8 76 0.0026 23.5 10.2 99 61-159 32-155 (214)
12 3vkg_A Dynein heavy chain, cyt 48.3 1.4E+02 0.0049 33.0 11.8 24 63-86 1935-1958(3245)
13 2p4v_A Transcription elongatio 45.3 64 0.0022 24.4 6.6 49 111-159 6-64 (158)
14 4dk0_A Putative MACA; alpha-ha 44.9 35 0.0012 27.7 5.4 10 76-85 70-79 (369)
15 1cxz_B Protein (PKN); protein- 44.4 23 0.0008 25.2 3.7 18 110-127 63-80 (86)
16 1ps1_A Pentalenene synthase; a 44.3 49 0.0017 26.7 6.1 83 42-130 192-277 (337)
17 1u4q_A Spectrin alpha chain, b 44.3 1.1E+02 0.0039 23.9 11.2 97 61-157 35-155 (322)
18 3d2f_A Heat shock protein homo 44.0 55 0.0019 30.0 7.1 88 63-154 528-617 (675)
19 2l16_A SEC-independent protein 43.1 28 0.00097 24.0 3.9 44 112-155 26-72 (78)
20 3fpp_A Macrolide-specific effl 42.4 78 0.0027 25.4 7.1 14 23-36 48-61 (341)
21 1quu_A Human skeletal muscle a 40.5 1.2E+02 0.0042 23.2 9.9 30 61-90 47-76 (250)
22 1urf_A Protein kinase C-like 1 39.0 63 0.0021 22.8 5.2 30 102-131 42-71 (81)
23 3r6n_A Desmoplakin; spectrin r 38.8 2E+02 0.007 25.3 10.7 32 62-93 35-66 (450)
24 4fla_A Regulation of nuclear P 37.3 1.1E+02 0.0037 23.4 6.8 67 94-160 66-133 (152)
25 3kb9_A EPI-isozizaene synthase 37.1 1E+02 0.0036 25.8 7.3 84 42-131 234-320 (382)
26 1deq_A Fibrinogen (alpha chain 35.7 1.6E+02 0.0055 26.1 8.4 78 54-131 69-151 (390)
27 2k48_A Nucleoprotein; viral pr 35.6 1.2E+02 0.0041 22.4 6.4 44 58-101 31-75 (107)
28 3na7_A HP0958; flagellar bioge 35.1 1.7E+02 0.0058 23.3 10.5 71 61-131 52-128 (256)
29 3oja_B Anopheles plasmodium-re 34.3 2.3E+02 0.0077 24.5 10.6 36 96-131 505-540 (597)
30 1cun_A Protein (alpha spectrin 34.0 1.4E+02 0.0047 21.9 10.6 30 62-91 33-62 (213)
31 1w6s_B Methanol dehydrogenase 33.6 52 0.0018 22.8 3.9 36 65-100 35-70 (74)
32 1u5p_A Spectrin alpha chain, b 33.3 1.4E+02 0.0049 21.9 11.7 98 61-158 35-156 (216)
33 1ud0_A HSC70, 70 kDa heat-shoc 32.6 49 0.0017 22.9 3.9 42 110-153 28-69 (113)
34 1lrw_B Methanol dehydrogenase 31.2 58 0.002 23.0 3.9 37 65-101 35-71 (83)
35 4fi5_A Nucleoprotein; structur 30.7 1.5E+02 0.0052 22.0 6.4 39 63-101 23-62 (113)
36 2ic6_A Nucleocapsid protein; h 29.4 1.5E+02 0.005 20.7 5.8 40 62-101 5-45 (78)
37 2kwh_A RAla-binding protein 1; 28.7 79 0.0027 20.9 4.0 49 73-121 7-55 (56)
38 3v1v_A 2-MIB synthase, 2-methy 28.6 90 0.0031 27.3 5.6 80 41-126 310-393 (433)
39 3fb2_A Spectrin alpha chain, b 28.6 1.8E+02 0.0063 21.7 9.6 31 62-92 46-76 (218)
40 1grj_A GREA protein; transcrip 28.5 1.3E+02 0.0043 22.7 5.8 44 111-154 6-59 (158)
41 2v4h_A NF-kappa-B essential mo 26.1 2E+02 0.0068 21.2 8.2 77 53-132 25-101 (110)
42 3nmd_A CGMP dependent protein 25.7 86 0.0029 21.6 4.0 35 56-90 34-68 (72)
43 3pvl_B Usher syndrome type-1G 25.2 23 0.0008 25.8 1.0 16 5-20 8-23 (96)
44 3na7_A HP0958; flagellar bioge 24.5 2.7E+02 0.0091 22.1 10.7 65 67-131 88-153 (256)
45 2f1m_A Acriflavine resistance 24.1 1.2E+02 0.0042 23.5 5.2 14 74-87 58-71 (277)
46 3vkg_A Dynein heavy chain, cyt 24.1 1.4E+02 0.0048 33.1 7.0 25 57-81 1950-1974(3245)
47 2rdz_A Cytochrome C-552; decah 23.9 2.8E+02 0.0096 24.4 8.0 21 138-158 336-356 (452)
48 3kbt_A Beta-I spectrin, spectr 22.6 2.8E+02 0.0095 21.7 10.8 30 61-90 36-65 (326)
49 2c5k_T Syntaxin TLG1, T-snare 22.1 1.6E+02 0.0056 20.6 5.0 77 74-161 11-88 (95)
50 2l2l_B Methyl-CPG-binding doma 21.7 98 0.0033 18.7 3.2 22 95-123 9-30 (36)
51 3fo3_A Eight-heme nitrite redu 21.0 3.1E+02 0.011 25.2 7.7 22 137-158 459-480 (525)
52 2wuj_A Septum site-determining 20.9 99 0.0034 19.7 3.3 27 64-90 29-55 (57)
53 2r0j_A Ubiquitin carrier prote 20.7 37 0.0013 25.1 1.4 15 62-76 1-15 (149)
54 1s35_A Beta-I spectrin, spectr 20.6 2.6E+02 0.0087 20.5 7.2 31 61-91 139-169 (214)
55 3lnn_A Membrane fusion protein 20.4 1.4E+02 0.0047 24.1 4.9 20 139-158 127-146 (359)
56 2spc_A Spectrin; cytoskeleton; 20.3 2E+02 0.0067 19.1 6.6 30 62-91 36-65 (107)
No 1
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=100.00 E-value=1.5e-38 Score=242.12 Aligned_cols=113 Identities=81% Similarity=1.141 Sum_probs=102.8
Q ss_pred cccccccchhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHhHHHHHHHHhhhchhHHHHHHHHHHHHHHH
Q 038806 50 KMATVRNLKIKTSTCKRVVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCRKRLESALAELKAA 129 (162)
Q Consensus 50 ~~~~lrqLkIKTgvVKRL~KE~~~Y~kE~~eq~~kvekmKaeg~DeydIKkQ~eVLeET~~MIPD~~~RL~~A~~dL~~~ 129 (162)
+||++|||+||||+|+||+||+.||++|+.+|++|+++|+++|+|+|+||||.+||+||++|||||++||.+|+.+|+++
T Consensus 3 ~~~~lrqLkIktg~vkRL~KE~~~Y~kE~~~q~~kiekmk~e~~dey~iKkq~evL~Et~~mipd~~~RL~~a~~~L~~~ 82 (116)
T 3mxz_A 3 HMATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRMMIPDCHKRLESALADLKST 82 (116)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh-hcCCCchhHHHHHHHHHHHHHHhhhhcC
Q 038806 130 LTELE-EENQEGQEIEDARSTIADVEKLFQTTEA 162 (162)
Q Consensus 130 l~e~e-~~~~~teEl~~Ake~L~~a~~~le~~~~ 162 (162)
|.+++ .++.++++|.+|+++|.+|+.++++.+|
T Consensus 83 l~~~~~~~~~~~ee~~~Ak~~l~~ae~~~~~~~~ 116 (116)
T 3mxz_A 83 LAELEETDEKEGPEIEDAKKTVADVEKQFPTEDA 116 (116)
T ss_dssp HHHHHTC-CCCCHHHHHHHHHHHHHHTC------
T ss_pred HHHhcccCCCChHHHHHHHHHHHHHHHhccCCCC
Confidence 99875 3567899999999999999999998875
No 2
>1h7c_A Tubulin-specific chaperone A; protein folding, cofactor A; 1.8A {Homo sapiens} SCOP: a.7.5.1
Probab=100.00 E-value=2.7e-36 Score=226.80 Aligned_cols=105 Identities=40% Similarity=0.656 Sum_probs=99.1
Q ss_pred ccccccchhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHhHHHHHHHHhhhchhHHHHHHHHHHHHHHHH
Q 038806 51 MATVRNLKIKTSTCKRVVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCRKRLESALAELKAAL 130 (162)
Q Consensus 51 ~~~lrqLkIKTgvVKRL~KE~~~Y~kE~~eq~~kvekmKaeg~DeydIKkQ~eVLeET~~MIPD~~~RL~~A~~dL~~~l 130 (162)
+|++|||+||||+|+||+||+.||++|+.+|++||++|+++|.|+|+||+|++||+||++|||||.+||.+|+.+|+++|
T Consensus 3 d~~l~qLkIkt~~vkRL~KE~~~Y~kE~~~q~~riek~k~e~~Dey~iKkq~evl~Et~~mipd~~~Rl~~a~~~L~~~l 82 (108)
T 1h7c_A 3 DPRVRQIKIKTGVVRRLVKERVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYLDLQRIL 82 (108)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCTHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred CccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCchhHHHHHHHHHHHHHH
Q 038806 131 TELEEENQEGQEIEDARSTIADVEKL 156 (162)
Q Consensus 131 ~e~e~~~~~teEl~~Ake~L~~a~~~ 156 (162)
.+ +++++++++|.+|+++|++|+..
T Consensus 83 ~~-e~~~~~~ee~~~Ake~l~~a~~~ 107 (108)
T 1h7c_A 83 EN-EKDLEEAEEYKEARLVLDSVKLE 107 (108)
T ss_dssp HH-CGGGTTSHHHHHHHHHHHHHHC-
T ss_pred Hh-cccCCCcHHHHHHHHHHHHHHhc
Confidence 74 56778999999999999999854
No 3
>1qsd_A Protein (beta-tubulin binding post-chaperonin cofactor); four-helix-bundle, chaperone; 2.20A {Saccharomyces cerevisiae} SCOP: a.7.5.1
Probab=100.00 E-value=4.6e-36 Score=225.11 Aligned_cols=104 Identities=34% Similarity=0.562 Sum_probs=96.8
Q ss_pred ccccccchhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhhHhHHHHHHHHhhhchhHHHHHHHHHHHHHHH
Q 038806 51 MATVRNLKIKTSTCKRVVKELHSYEKEVEREAAKTADMKEKGA-DPYDLKQQENVLAESRMMIPDCRKRLESALAELKAA 129 (162)
Q Consensus 51 ~~~lrqLkIKTgvVKRL~KE~~~Y~kE~~eq~~kvekmKaeg~-DeydIKkQ~eVLeET~~MIPD~~~RL~~A~~dL~~~ 129 (162)
|| +|||+||||||+||+||+.||++|+.+|++||++|+++|. |+|+||+|++||+||++|||||.+||.+|+.+|+++
T Consensus 1 ma-~rqLkIktg~vkRL~KE~~~Y~kE~~~q~~riek~k~~~~~dey~iKkq~evl~Et~~mipd~~~Rl~~a~~~L~~~ 79 (106)
T 1qsd_A 1 MA-PTQLDIKVKALKRLTKEEGYYQQELKDQEAHVAKLKEDKSVDPYDLKKQEEVLDDTKRLLPTLYEKIREFKEDLEQF 79 (106)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 56 8999999999999999999999999999999999999988 999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCchhHHHHHHHHHHHHHHhhh
Q 038806 130 LTELEEENQEGQEIEDARSTIADVEKLFQT 159 (162)
Q Consensus 130 l~e~e~~~~~teEl~~Ake~L~~a~~~le~ 159 (162)
|. +++++++|.+|+++|++|+.++++
T Consensus 80 l~----~~~~~ee~~~Ake~l~~a~~~~~~ 105 (106)
T 1qsd_A 80 LK----TYQGTEDVSDARSAITSAQELLDS 105 (106)
T ss_dssp HH----TCCSSSCCHHHHHHHHHHHHHHHC
T ss_pred HH----hccCcHHHHHHHHHHHHHHHhhcc
Confidence 93 566889999999999999998863
No 4
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=89.32 E-value=7.2 Score=31.17 Aligned_cols=83 Identities=19% Similarity=0.243 Sum_probs=54.4
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHhHHHHHHHHhh-hchhHHHHHHHHHHHHHHHHHHHhhcCCCch
Q 038806 63 TCKRVVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM-MIPDCRKRLESALAELKAALTELEEENQEGQ 141 (162)
Q Consensus 63 vVKRL~KE~~~Y~kE~~eq~~kvekmKaeg~DeydIKkQ~eVLeET~~-MIPD~~~RL~~A~~dL~~~l~e~e~~~~~te 141 (162)
-+.|+++|...|..|=.....+++..-+ .+. -|-..+..|++-.. +-++-+.+|..++.+++++|... +.+
T Consensus 123 eI~~m~~~a~~~~~eD~~~r~~~e~kn~--le~-~i~~~~~~l~~~~~~l~~~~k~~i~~~l~~~~~~L~~~-----~~~ 194 (219)
T 4e81_A 123 EIQKMVRDAEANAEADRKFEELVQTRNQ--GDH-LLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGE-----DKA 194 (219)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHH--HHH-HHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHSS-----CHH
T ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHH--HHH-HHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHHhcC-----CHH
Confidence 3788888888887766666655554332 222 22233344445443 44778889999999999999632 567
Q ss_pred hHHHHHHHHHHH
Q 038806 142 EIEDARSTIADV 153 (162)
Q Consensus 142 El~~Ake~L~~a 153 (162)
+|..+.+-|+.+
T Consensus 195 ~i~~~~~~L~~~ 206 (219)
T 4e81_A 195 AIEAKMQELAQV 206 (219)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888887777654
No 5
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=78.81 E-value=29 Score=31.19 Aligned_cols=83 Identities=17% Similarity=0.201 Sum_probs=54.5
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHhHHHHHHHHhh-hchhHHHHHHHHHHHHHHHHHHHhhcCCCch
Q 038806 63 TCKRVVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM-MIPDCRKRLESALAELKAALTELEEENQEGQ 141 (162)
Q Consensus 63 vVKRL~KE~~~Y~kE~~eq~~kvekmKaeg~DeydIKkQ~eVLeET~~-MIPD~~~RL~~A~~dL~~~l~e~e~~~~~te 141 (162)
-+.|+++|...|..|=....++++..-+-..=-|.+ +..+++-.. +-++-+.++..++++++++|.. .+.+
T Consensus 511 ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~ 582 (605)
T 4b9q_A 511 EIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHST---RKQVEEAGDKLPADDKTAIESALTALETALKG-----EDKA 582 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHS-----SCHH
T ss_pred HHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhhhCCHHHHHHHHHHHHHHHHHHhc-----CCHH
Confidence 478899998888877666665554432211112333 344555443 4477888999999999999963 2567
Q ss_pred hHHHHHHHHHHH
Q 038806 142 EIEDARSTIADV 153 (162)
Q Consensus 142 El~~Ake~L~~a 153 (162)
++..+.+-|+.+
T Consensus 583 ~~~~~~~~l~~~ 594 (605)
T 4b9q_A 583 AIEAKMQELAQV 594 (605)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888777654
No 6
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=62.82 E-value=55 Score=25.82 Aligned_cols=85 Identities=18% Similarity=0.193 Sum_probs=53.0
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHhHHHHHHH-HhhhchhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 038806 62 STCKRVVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAE-SRMMIPDCRKRLESALAELKAALTELEEENQEG 140 (162)
Q Consensus 62 gvVKRL~KE~~~Y~kE~~eq~~kvekmKaeg~DeydIKkQ~eVLeE-T~~MIPD~~~RL~~A~~dL~~~l~e~e~~~~~t 140 (162)
.-+.|++++...|..|=.....+++..-+-..=-|.+++. |++ ...+-++-+..|..++.+++++|.. .+.
T Consensus 119 eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~---l~~~~~~~~~~~k~~i~~~l~~~~~wl~~-----~d~ 190 (227)
T 1u00_A 119 SEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGA---LAADAALLSAAERQVIDDAAAHLSEVAQG-----DDV 190 (227)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHGGGSCHHHHHHHHHHHHHHHHHTTS-----SCH
T ss_pred HHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHH---HHhhhccCCHHHHHHHHHHHHHHHHHHhc-----CCH
Confidence 3578888888888876655555554433211112344333 233 2345577888999999999999852 245
Q ss_pred hhHHHHHHHHHHHH
Q 038806 141 QEIEDARSTIADVE 154 (162)
Q Consensus 141 eEl~~Ake~L~~a~ 154 (162)
++|.++.+-|+.+-
T Consensus 191 ~~~~~~~~~L~~~~ 204 (227)
T 1u00_A 191 DAIEQAIKNVDKQT 204 (227)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 67877777776543
No 7
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=59.08 E-value=93 Score=27.86 Aligned_cols=84 Identities=17% Similarity=0.214 Sum_probs=51.4
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHhHHHHHHHH-hhhchhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 038806 62 STCKRVVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAES-RMMIPDCRKRLESALAELKAALTELEEENQEG 140 (162)
Q Consensus 62 gvVKRL~KE~~~Y~kE~~eq~~kvekmKaeg~DeydIKkQ~eVLeET-~~MIPD~~~RL~~A~~dL~~~l~e~e~~~~~t 140 (162)
.-+.|++++...|..|=....++++..-+-..=-|.++ ..|+|- ..+-++-+..|..++.+++++|.. .+.
T Consensus 510 ~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~---~~l~~~~~~~~~~~~~~i~~~~~~~~~~l~~-----~~~ 581 (605)
T 2kho_A 510 DEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTR---KQVEEAGDKLPADDKTAIESALTALETALKG-----EDK 581 (605)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHGGGSCHHHHHHHHHHHHHHHHHTTS-----SCH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH---HHHHhhhccCCHHHHHHHHHHHHHHHHHHhc-----CCH
Confidence 35788888888886655444444443222111123333 334442 235577788999999999998852 266
Q ss_pred hhHHHHHHHHHHH
Q 038806 141 QEIEDARSTIADV 153 (162)
Q Consensus 141 eEl~~Ake~L~~a 153 (162)
++|.++.+.|+++
T Consensus 582 ~~~~~~~~~l~~~ 594 (605)
T 2kho_A 582 AAIEAKMQELAQV 594 (605)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH
Confidence 7888887777653
No 8
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=56.76 E-value=44 Score=23.74 Aligned_cols=44 Identities=18% Similarity=0.356 Sum_probs=33.3
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHH
Q 038806 110 MMIPDCRKRLESALAELKAALTELEEENQEGQEIEDARSTIADVEK 155 (162)
Q Consensus 110 ~MIPD~~~RL~~A~~dL~~~l~e~e~~~~~teEl~~Ake~L~~a~~ 155 (162)
.+-++-+.+|..++.+|+.+|.. .+..+.++|..+.+.|+.+-.
T Consensus 42 kl~~eek~~I~~~i~el~~~L~~--~~~ad~e~ik~k~~eL~~~~~ 85 (120)
T 2p32_A 42 KISPEDKKKIEDKCDEILKWLDS--NQTAEKEEFEHQQKDLEGLAN 85 (120)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHH--HTTCCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHc--CCcCCHHHHHHHHHHHHHHHH
Confidence 46677889999999999999963 233467888888888876543
No 9
>3he4_B Synzip5; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=53.55 E-value=17 Score=22.76 Aligned_cols=24 Identities=42% Similarity=0.632 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 038806 67 VVKELHSYEKEVEREAAKTADMKE 90 (162)
Q Consensus 67 L~KE~~~Y~kE~~eq~~kvekmKa 90 (162)
.+||+.-|-+|+++..+.+..++.
T Consensus 4 tvkelknyiqeleernaelknlke 27 (46)
T 3he4_B 4 TVKELKNYIQELEERNAELKNLKE 27 (46)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhHHHHhHHH
Confidence 368999999999988888777664
No 10
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=50.95 E-value=60 Score=22.59 Aligned_cols=42 Identities=19% Similarity=0.217 Sum_probs=31.0
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHH
Q 038806 110 MMIPDCRKRLESALAELKAALTELEEENQEGQEIEDARSTIADV 153 (162)
Q Consensus 110 ~MIPD~~~RL~~A~~dL~~~l~e~e~~~~~teEl~~Ake~L~~a 153 (162)
.+=++-+.+|..++.+|..+|.. .+..+.++|..+.+-|+.+
T Consensus 33 kl~~eek~~i~~~i~e~~~wL~~--~~~a~~e~i~~k~~eL~~~ 74 (113)
T 3lof_A 33 KISEADKKKVLDKCQEVISWLDA--NTLAEKDEFEHKRKELEQV 74 (113)
T ss_dssp TBCHHHHHHHHHHHHHHHHHHHH--CTTCCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHc--CCcCCHHHHHHHHHHHHHH
Confidence 34567788999999999999975 2334667888887777654
No 11
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=49.77 E-value=76 Score=23.47 Aligned_cols=99 Identities=17% Similarity=0.236 Sum_probs=56.9
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHHHhhcC-------CCc--hhhHhHHHHHHHHhhhc----hhHHHHHH-------
Q 038806 61 TSTCKRVVKELHSYEKEVEREAAKTADMKEKG-------ADP--YDLKQQENVLAESRMMI----PDCRKRLE------- 120 (162)
Q Consensus 61 TgvVKRL~KE~~~Y~kE~~eq~~kvekmKaeg-------~De--ydIKkQ~eVLeET~~MI----PD~~~RL~------- 120 (162)
...|+.+++.+..++.|+...+.+++.+...| .++ -.|++....|.+.-.-| ..-+.+|.
T Consensus 32 l~~v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~r~~~L~~~l~l~~ 111 (214)
T 1s35_A 32 LPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQE 111 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35689999999999999999888888877543 121 24555544444433222 22233333
Q ss_pred --HHHHHHHHHHHHHhhcC---CCchhHHHHHHHHHHHHHHhhh
Q 038806 121 --SALAELKAALTELEEEN---QEGQEIEDARSTIADVEKLFQT 159 (162)
Q Consensus 121 --~A~~dL~~~l~e~e~~~---~~teEl~~Ake~L~~a~~~le~ 159 (162)
..+.++..+|.+.+..+ .-...+..++.+|+.-+.+-..
T Consensus 112 F~~~~~~~~~Wl~~~E~~l~~~~~g~~~~~v~~llkkh~~f~~~ 155 (214)
T 1s35_A 112 FQKDAKQAEAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGS 155 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Confidence 34445555665544321 1223566777777655554433
No 12
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=48.25 E-value=1.4e+02 Score=33.04 Aligned_cols=24 Identities=13% Similarity=0.216 Sum_probs=11.2
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHH
Q 038806 63 TCKRVVKELHSYEKEVEREAAKTA 86 (162)
Q Consensus 63 vVKRL~KE~~~Y~kE~~eq~~kve 86 (162)
.|..|-+|+.--+.++++-.+..+
T Consensus 1935 ~V~~l~~~L~~~~~~L~~k~~ea~ 1958 (3245)
T 3vkg_A 1935 QVKDLQVSLAQKNRELDVKNEQAN 1958 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555554444444333
No 13
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=45.33 E-value=64 Score=24.43 Aligned_cols=49 Identities=10% Similarity=0.173 Sum_probs=34.2
Q ss_pred hchhHHHHHHHHHHHHHH--------HHHHH--hhcCCCchhHHHHHHHHHHHHHHhhh
Q 038806 111 MIPDCRKRLESALAELKA--------ALTEL--EEENQEGQEIEDARSTIADVEKLFQT 159 (162)
Q Consensus 111 MIPD~~~RL~~A~~dL~~--------~l~e~--e~~~~~teEl~~Ake~L~~a~~~le~ 159 (162)
|-|....+|+.-+..|.. .+.+. ..|+.+..||.+|++-+...+.-+..
T Consensus 6 lT~~g~~~L~~EL~~L~~~~R~~i~~~i~~Ar~~GDlsENaeY~aak~~q~~~e~rI~~ 64 (158)
T 2p4v_A 6 VTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRY 64 (158)
T ss_dssp ECHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHSCTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcccchhHHHHHHHHHHHHHHHHH
Confidence 667788888888888854 23322 24666889999999987766655443
No 14
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=44.90 E-value=35 Score=27.71 Aligned_cols=10 Identities=10% Similarity=0.132 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 038806 76 KEVEREAAKT 85 (162)
Q Consensus 76 kE~~eq~~kv 85 (162)
.++...++.+
T Consensus 70 ~~l~~~~a~l 79 (369)
T 4dk0_A 70 NTLNTRKAAL 79 (369)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 15
>1cxz_B Protein (PKN); protein-protein complex, antiparallel coiled-coil, signaling protein; HET: GSP; 2.20A {Homo sapiens} SCOP: a.2.6.1
Probab=44.38 E-value=23 Score=25.15 Aligned_cols=18 Identities=17% Similarity=0.434 Sum_probs=8.4
Q ss_pred hhchhHHHHHHHHHHHHH
Q 038806 110 MMIPDCRKRLESALAELK 127 (162)
Q Consensus 110 ~MIPD~~~RL~~A~~dL~ 127 (162)
.++-.+..+|..-..+|.
T Consensus 63 ~eL~~sn~kl~~L~~eL~ 80 (86)
T 1cxz_B 63 LLLRGSSRRLDLLHQQLQ 80 (86)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344555555554444443
No 16
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A
Probab=44.26 E-value=49 Score=26.71 Aligned_cols=83 Identities=12% Similarity=0.075 Sum_probs=54.4
Q ss_pred CCCCcccccccccccchhhhhhHhHHHHHHHHHHHHHHHHH--HHHHH-HhhcCCCchhhHhHHHHHHHHhhhchhHHHH
Q 038806 42 SPLPDQKVKMATVRNLKIKTSTCKRVVKELHSYEKEVEREA--AKTAD-MKEKGADPYDLKQQENVLAESRMMIPDCRKR 118 (162)
Q Consensus 42 ~~~~~~~~~~~~lrqLkIKTgvVKRL~KE~~~Y~kE~~eq~--~kvek-mKaeg~DeydIKkQ~eVLeET~~MIPD~~~R 118 (162)
..+|+.-...+..+.|.--.+.+-||.-+..+|++|..... .-|.- |+..|- -.++.+++...|+-++.++
T Consensus 192 ~~l~~~~~~~p~~~~l~~~~~~i~rL~NDl~S~~kE~~~G~~~n~V~~~m~~~g~------s~eeA~~~v~~~i~~~~~~ 265 (337)
T 1ps1_A 192 FEVPHRVFDSAVMSAMLQIAVDVNLLLNDIASLEKEEARGEQNNMVMILRREHGW------SKSRSVSHMQNEVRARLEQ 265 (337)
T ss_dssp CCCCHHHHTSHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCCCSHHHHHHHHHCC------CHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHhChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCcchHHHHHHHHcCC------CHHHHHHHHHHHHHHHHHH
Confidence 35666545556667788889999999999999999984211 00110 111121 1356788888888888888
Q ss_pred HHHHHHHHHHHH
Q 038806 119 LESALAELKAAL 130 (162)
Q Consensus 119 L~~A~~dL~~~l 130 (162)
+......|-.+.
T Consensus 266 ~~~~~~~lp~~~ 277 (337)
T 1ps1_A 266 YLLLESCLPKVG 277 (337)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHhhhhh
Confidence 887776665543
No 17
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=44.26 E-value=1.1e+02 Score=23.87 Aligned_cols=97 Identities=11% Similarity=0.209 Sum_probs=53.8
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc-------C-CCchhhHhHHHHHHHH----hhhchhHHHHH---------
Q 038806 61 TSTCKRVVKELHSYEKEVEREAAKTADMKEK-------G-ADPYDLKQQENVLAES----RMMIPDCRKRL--------- 119 (162)
Q Consensus 61 TgvVKRL~KE~~~Y~kE~~eq~~kvekmKae-------g-~DeydIKkQ~eVLeET----~~MIPD~~~RL--------- 119 (162)
...|+.+++++...+.++...+.+|+.+... | .|.-.|+.....|.+. ...+.+-+.+|
T Consensus 35 l~~v~~ll~kh~~le~~i~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~l~~f 114 (322)
T 1u4q_A 35 LASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQF 114 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999888888777642 2 3444555543333221 12222333333
Q ss_pred HHHHHHHHHHHHHHhhcC---CCchhHHHHHHHHHHHHHHh
Q 038806 120 ESALAELKAALTELEEEN---QEGQEIEDARSTIADVEKLF 157 (162)
Q Consensus 120 ~~A~~dL~~~l~e~e~~~---~~teEl~~Ake~L~~a~~~l 157 (162)
...+.++..+|.+.+... .-..++..++..|..-+.+-
T Consensus 115 ~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~~h~~l~ 155 (322)
T 1u4q_A 115 FRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLE 155 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHHH
Confidence 333455666666543211 12235666666665544443
No 18
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=43.97 E-value=55 Score=30.05 Aligned_cols=88 Identities=10% Similarity=0.074 Sum_probs=50.8
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHhHHHHHHH--HhhhchhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 038806 63 TCKRVVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAE--SRMMIPDCRKRLESALAELKAALTELEEENQEG 140 (162)
Q Consensus 63 vVKRL~KE~~~Y~kE~~eq~~kvekmKaeg~DeydIKkQ~eVLeE--T~~MIPD~~~RL~~A~~dL~~~l~e~e~~~~~t 140 (162)
-+.|++++...|..+=....++.+..-+-..=-|+++.. |++ ...+-++-+.+|..++++++++|.+. ...+..
T Consensus 528 ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~---l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~-~~~~~~ 603 (675)
T 3d2f_A 528 KLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGK---LEEEYAPFASDAEKTKLQGMLNKAEEWLYDE-GFDSIK 603 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTTTTGGGSCHHHHHHHHHHHHHHHHHTTTG-GGGCCH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhhCCHHHHHHHHHHHHHHHHHHhcC-CchhhH
Confidence 478888888877765544444433222100112333332 222 12455677888999999999998632 222356
Q ss_pred hhHHHHHHHHHHHH
Q 038806 141 QEIEDARSTIADVE 154 (162)
Q Consensus 141 eEl~~Ake~L~~a~ 154 (162)
++|.++.+-|+.+-
T Consensus 604 ~~~~~~~~~l~~~~ 617 (675)
T 3d2f_A 604 AKYIAKYEELASLG 617 (675)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 77877777776543
No 19
>2l16_A SEC-independent protein translocase protein tatad; membrane protein, protein transport; NMR {Bacillus subtilis}
Probab=43.14 E-value=28 Score=24.02 Aligned_cols=44 Identities=16% Similarity=0.258 Sum_probs=22.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCC---CchhHHHHHHHHHHHHH
Q 038806 112 IPDCRKRLESALAELKAALTELEEENQ---EGQEIEDARSTIADVEK 155 (162)
Q Consensus 112 IPD~~~RL~~A~~dL~~~l~e~e~~~~---~teEl~~Ake~L~~a~~ 155 (162)
||..-+-|.+++..++..+.+..++.+ ..+|+.+.++.++++.+
T Consensus 26 LP~l~r~lGk~ir~fK~~~~~~~~e~~~~~~~~el~~~~~~~~~~~~ 72 (78)
T 2l16_A 26 LPEIGRAAGRTLLEFKSATKSLVSGDEKEEKSAELTAVKQDKNAGLE 72 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCC--------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhHHhhHHHHHHHHHHHHHHHH
Confidence 689999999999999999988755443 44566666666655543
No 20
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=42.38 E-value=78 Score=25.37 Aligned_cols=14 Identities=7% Similarity=-0.156 Sum_probs=6.0
Q ss_pred eccccccccceEEE
Q 038806 23 QRPHRVGTVNCEVL 36 (162)
Q Consensus 23 ~~~~~~~~~~~~~~ 36 (162)
.---+|.+..-|+.
T Consensus 48 ~~G~~V~kG~~L~~ 61 (341)
T 3fpp_A 48 AIGDKVKKDQLLGV 61 (341)
T ss_dssp CTTCEECTTCEEEE
T ss_pred CCCCEECCCCEEEE
Confidence 33344444444443
No 21
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=40.53 E-value=1.2e+02 Score=23.25 Aligned_cols=30 Identities=3% Similarity=0.308 Sum_probs=25.8
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 038806 61 TSTCKRVVKELHSYEKEVEREAAKTADMKE 90 (162)
Q Consensus 61 TgvVKRL~KE~~~Y~kE~~eq~~kvekmKa 90 (162)
...|+-|+|.+..++.|+...+.+++.+..
T Consensus 47 l~~v~~llkkh~~~~~el~~~~~~v~~l~~ 76 (250)
T 1quu_A 47 LTEVRALLRKHEAFESDLAAHQDRVEQIAA 76 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367899999999999999999999987664
No 22
>1urf_A Protein kinase C-like 1; transferase, G-protein, HR1 domain, helical, coiled coil, ATP-binding, serine/threonine-protein kinase, phosphorylation; NMR {Homo sapiens} SCOP: a.2.6.1 PDB: 2rmk_B*
Probab=38.98 E-value=63 Score=22.81 Aligned_cols=30 Identities=20% Similarity=0.431 Sum_probs=22.7
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHHHHHHHH
Q 038806 102 ENVLAESRMMIPDCRKRLESALAELKAALT 131 (162)
Q Consensus 102 ~eVLeET~~MIPD~~~RL~~A~~dL~~~l~ 131 (162)
+.+|.|.+.|+-|++.+|.----.+.....
T Consensus 42 rKlLaeAQqmL~DSk~KIe~lRmqI~k~~q 71 (81)
T 1urf_A 42 RKLLLTAQQMLQDSKTKIDIIRMQLRRALQ 71 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 679999999999999998765444444443
No 23
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=38.79 E-value=2e+02 Score=25.26 Aligned_cols=32 Identities=3% Similarity=0.043 Sum_probs=28.5
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 038806 62 STCKRVVKELHSYEKEVEREAAKTADMKEKGA 93 (162)
Q Consensus 62 gvVKRL~KE~~~Y~kE~~eq~~kvekmKaeg~ 93 (162)
.+|..|++.+...+.++.....+|+.+.+...
T Consensus 35 ~sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a~ 66 (450)
T 3r6n_A 35 ASVEQHINSHRGIHNSIGDYRWQLDKIKADLR 66 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 46999999999999999999999999987644
No 24
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=37.31 E-value=1.1e+02 Score=23.36 Aligned_cols=67 Identities=12% Similarity=0.234 Sum_probs=48.6
Q ss_pred CchhhHhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHhhhh
Q 038806 94 DPYDLKQQENVLAESRMMIPDCRKRLESALAELKAALTELEEENQ-EGQEIEDARSTIADVEKLFQTT 160 (162)
Q Consensus 94 DeydIKkQ~eVLeET~~MIPD~~~RL~~A~~dL~~~l~e~e~~~~-~teEl~~Ake~L~~a~~~le~~ 160 (162)
|--...+-.+.++|+.+++-+-..||...+.+=..++.-.+.... -.+.+.+|+..|++.+..+..+
T Consensus 66 Dk~~~e~l~~~veeA~~~L~eYn~rL~~E~~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv 133 (152)
T 4fla_A 66 DKEAAERLSKTVDEACLLLAEYNGRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARV 133 (152)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455667888999999999999999998887666544332211 3467888899998888877654
No 25
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A*
Probab=37.12 E-value=1e+02 Score=25.83 Aligned_cols=84 Identities=15% Similarity=0.199 Sum_probs=57.6
Q ss_pred CCCCcccccccccccchhhhhhHhHHHHHHHHHHHHHHHHH--HHHHH-HhhcCCCchhhHhHHHHHHHHhhhchhHHHH
Q 038806 42 SPLPDQKVKMATVRNLKIKTSTCKRVVKELHSYEKEVEREA--AKTAD-MKEKGADPYDLKQQENVLAESRMMIPDCRKR 118 (162)
Q Consensus 42 ~~~~~~~~~~~~lrqLkIKTgvVKRL~KE~~~Y~kE~~eq~--~kvek-mKaeg~DeydIKkQ~eVLeET~~MIPD~~~R 118 (162)
..+|+.-...+..+.|.--++.+-||.-+..+|++|..... .-|.= |+..|- -.++.+++...||-++.++
T Consensus 234 ~~l~~~~~~~p~~~~l~~~~~~i~rL~NDi~S~~kE~~~G~~~N~V~~~m~~~g~------s~eeA~~~v~~~i~~~~k~ 307 (382)
T 3kb9_A 234 CELPDAVRKHPAYRRAALLSQEFAAWYNDLCSLPKEIAGDEVHNLGISLITHHSL------TLEEAIGEVRRRVEECITE 307 (382)
T ss_dssp CCCCHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHSCC------CHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHcCCC------CHHHHHHHHHHHHHHHHHH
Confidence 46777655556677788888999999999999999985210 00110 111111 1367888888999999998
Q ss_pred HHHHHHHHHHHHH
Q 038806 119 LESALAELKAALT 131 (162)
Q Consensus 119 L~~A~~dL~~~l~ 131 (162)
+..+..+|-.+..
T Consensus 308 ~~~~~~~L~~~~~ 320 (382)
T 3kb9_A 308 FLAVERDALRFAD 320 (382)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhh
Confidence 8888777766543
No 26
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=35.72 E-value=1.6e+02 Score=26.15 Aligned_cols=78 Identities=9% Similarity=0.106 Sum_probs=47.5
Q ss_pred cccchhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-----hhhHhHHHHHHHHhhhchhHHHHHHHHHHHHHH
Q 038806 54 VRNLKIKTSTCKRVVKELHSYEKEVEREAAKTADMKEKGADP-----YDLKQQENVLAESRMMIPDCRKRLESALAELKA 128 (162)
Q Consensus 54 lrqLkIKTgvVKRL~KE~~~Y~kE~~eq~~kvekmKaeg~De-----ydIKkQ~eVLeET~~MIPD~~~RL~~A~~dL~~ 128 (162)
...|+-...-++|..++-..|-+.+.+.-++..+-..+...- -+|+++...|+++...--.-.++|+.-+.++..
T Consensus 69 Ie~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~ 148 (390)
T 1deq_A 69 INKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEILRRKVIEQVQRINLLQKNVRDQLV 148 (390)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 444555555666777777777777766555544433333222 378899999998865533366777777655544
Q ss_pred HHH
Q 038806 129 ALT 131 (162)
Q Consensus 129 ~l~ 131 (162)
-|.
T Consensus 149 kiq 151 (390)
T 1deq_A 149 DMK 151 (390)
T ss_pred HHH
Confidence 443
No 27
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=35.60 E-value=1.2e+02 Score=22.42 Aligned_cols=44 Identities=18% Similarity=0.293 Sum_probs=36.0
Q ss_pred hhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCchhhHhH
Q 038806 58 KIKTSTCKRVVKELHSYEKEVEREAAKTADMKE-KGADPYDLKQQ 101 (162)
Q Consensus 58 kIKTgvVKRL~KE~~~Y~kE~~eq~~kvekmKa-eg~DeydIKkQ 101 (162)
+|-.+.++.|.+|+.--++.+.-...|+..-.. -+.|+-++.++
T Consensus 31 ~~tM~~ieeLQ~Ei~~~E~QL~iArQKLkdAe~~~E~DPDevNK~ 75 (107)
T 2k48_A 31 PFTMSTLQELQENITAHEQQLVTARQKLKDAEKAVEVDPDDVNKS 75 (107)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 577899999999999999999998888866543 36788888776
No 28
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=35.13 E-value=1.7e+02 Score=23.29 Aligned_cols=71 Identities=13% Similarity=0.112 Sum_probs=34.6
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc---C--CCc-hhhHhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHH
Q 038806 61 TSTCKRVVKELHSYEKEVEREAAKTADMKEK---G--ADP-YDLKQQENVLAESRMMIPDCRKRLESALAELKAALT 131 (162)
Q Consensus 61 TgvVKRL~KE~~~Y~kE~~eq~~kvekmKae---g--~De-ydIKkQ~eVLeET~~MIPD~~~RL~~A~~dL~~~l~ 131 (162)
.+.+.-+-++..-.+.++.+..+++.+.+.. + +.+ -.+.+..+.++.-...+-+-...+...+..++..+.
T Consensus 52 ~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~~l~~v~~~kE~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~ 128 (256)
T 3na7_A 52 EEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQE 128 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555566666666666665532 2 222 344455555554444444444444444444444443
No 29
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=34.33 E-value=2.3e+02 Score=24.48 Aligned_cols=36 Identities=8% Similarity=-0.025 Sum_probs=17.9
Q ss_pred hhhHhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHH
Q 038806 96 YDLKQQENVLAESRMMIPDCRKRLESALAELKAALT 131 (162)
Q Consensus 96 ydIKkQ~eVLeET~~MIPD~~~RL~~A~~dL~~~l~ 131 (162)
-++++...-+++-...+-.-.++++++++++...+.
T Consensus 505 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (597)
T 3oja_B 505 DNLNKVFTHLKERQAFKLRETQARRTEADAKQKETE 540 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcchh
Confidence 344444444444444444455556666654444444
No 30
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=33.99 E-value=1.4e+02 Score=21.87 Aligned_cols=30 Identities=10% Similarity=0.171 Sum_probs=25.1
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 038806 62 STCKRVVKELHSYEKEVEREAAKTADMKEK 91 (162)
Q Consensus 62 gvVKRL~KE~~~Y~kE~~eq~~kvekmKae 91 (162)
..|+.+++.+...+.|+...+.+++.+...
T Consensus 33 ~~v~~ll~kh~~~~~ei~~~~~~v~~v~~~ 62 (213)
T 1cun_A 33 TGVQNLRKKHKRLEAELAAHEPAIQSVLDT 62 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 578899999999999999888888776643
No 31
>1w6s_B Methanol dehydrogenase subunit 2; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: a.137.2.1 PDB: 1h4j_B* 1h4i_B* 2d0v_B*
Probab=33.64 E-value=52 Score=22.81 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHh
Q 038806 65 KRVVKELHSYEKEVEREAAKTADMKEKGADPYDLKQ 100 (162)
Q Consensus 65 KRL~KE~~~Y~kE~~eq~~kvekmKaeg~DeydIKk 100 (162)
+-|-|...+-+.-.+..+.|++.|+..|.=.||+++
T Consensus 35 ~EL~KQ~~si~ame~RN~kRv~~fkkTG~~~ydV~k 70 (74)
T 1w6s_B 35 KELNKQADSIKQMEERNKKRVENFKKTGKFEYDVAK 70 (74)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHSSCCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCceEEehhh
Confidence 455666666666667788899999999999999986
No 32
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=33.27 E-value=1.4e+02 Score=21.92 Aligned_cols=98 Identities=11% Similarity=0.206 Sum_probs=55.0
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc-------C-CCchhhHhHHHHHHHH----hhhchhHHHHH---------
Q 038806 61 TSTCKRVVKELHSYEKEVEREAAKTADMKEK-------G-ADPYDLKQQENVLAES----RMMIPDCRKRL--------- 119 (162)
Q Consensus 61 TgvVKRL~KE~~~Y~kE~~eq~~kvekmKae-------g-~DeydIKkQ~eVLeET----~~MIPD~~~RL--------- 119 (162)
...|+.|++.+...+.++...+.+|+.+... | .|.-.|+.....|.+. ..+.-.-+.+|
T Consensus 35 l~~v~~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~l~qf 114 (216)
T 1u5p_A 35 LASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQF 114 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678999999999999999888888777652 2 3334455443333222 11122223333
Q ss_pred HHHHHHHHHHHHHHhhcC---CCchhHHHHHHHHHHHHHHhh
Q 038806 120 ESALAELKAALTELEEEN---QEGQEIEDARSTIADVEKLFQ 158 (162)
Q Consensus 120 ~~A~~dL~~~l~e~e~~~---~~teEl~~Ake~L~~a~~~le 158 (162)
...+.++..+|.+.+... .-...+..++.+++.-+.+-.
T Consensus 115 ~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~kh~~~~~ 156 (216)
T 1u5p_A 115 FRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEA 156 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHH
Confidence 333556666666654211 112356677777765554443
No 33
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=32.57 E-value=49 Score=22.85 Aligned_cols=42 Identities=14% Similarity=0.233 Sum_probs=28.1
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHH
Q 038806 110 MMIPDCRKRLESALAELKAALTELEEENQEGQEIEDARSTIADV 153 (162)
Q Consensus 110 ~MIPD~~~RL~~A~~dL~~~l~e~e~~~~~teEl~~Ake~L~~a 153 (162)
.+-++-+.+|..++.+|+.+|... +..+.++|..+.+.|+.+
T Consensus 28 kl~~~ek~~i~~~i~~l~~~L~~~--~~ad~~~i~~~~~~L~~~ 69 (113)
T 1ud0_A 28 KINDEDKQKILDKCNEIISWLDKN--QTAEKEEFEHQQKELEKV 69 (113)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHTHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcC--CccCHHHHHHHHHHHHHH
Confidence 355667888899999998888532 112446677777766654
No 34
>1lrw_B Methanol dehydrogenase subunit 2; heavy subunits: 8-fold beta-propeller superbarrel, oxidoreductase; HET: PQQ; 2.50A {Paracoccus denitrificans} SCOP: a.137.2.1
Probab=31.18 E-value=58 Score=22.96 Aligned_cols=37 Identities=24% Similarity=0.251 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHhH
Q 038806 65 KRVVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQ 101 (162)
Q Consensus 65 KRL~KE~~~Y~kE~~eq~~kvekmKaeg~DeydIKkQ 101 (162)
+-|-|...+-+.--+..+.|++.|+..|.=.||+++-
T Consensus 35 ~EL~KQ~~si~ame~RN~kRv~~fkkTGkf~ydV~ki 71 (83)
T 1lrw_B 35 AELSKQGESLAVMDARNEWRVWNMKKTGKFEYDVKKI 71 (83)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHSSCCCCGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCceEEehhhc
Confidence 4556666666666677888999999999999999863
No 35
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=30.74 E-value=1.5e+02 Score=22.01 Aligned_cols=39 Identities=21% Similarity=0.337 Sum_probs=30.6
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCchhhHhH
Q 038806 63 TCKRVVKELHSYEKEVEREAAKTADMKE-KGADPYDLKQQ 101 (162)
Q Consensus 63 vVKRL~KE~~~Y~kE~~eq~~kvekmKa-eg~DeydIKkQ 101 (162)
.+++|.+|+..-++.+.-...|+..-.. -+.|+-++.++
T Consensus 23 ~ieeLq~Ei~~~E~QL~~ArQKLkdA~~~~e~DPDevNK~ 62 (113)
T 4fi5_A 23 TMEELQREINAHEGQLVIARQKVRDAEKQYEKDPDELNKR 62 (113)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 4789999999999999988888866543 35777777765
No 36
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=29.39 E-value=1.5e+02 Score=20.73 Aligned_cols=40 Identities=25% Similarity=0.289 Sum_probs=31.4
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCchhhHhH
Q 038806 62 STCKRVVKELHSYEKEVEREAAKTADMKE-KGADPYDLKQQ 101 (162)
Q Consensus 62 gvVKRL~KE~~~Y~kE~~eq~~kvekmKa-eg~DeydIKkQ 101 (162)
+.++.|.+|+.--++.+.-...|+..-.. -+.||-++.++
T Consensus 5 ~~l~eLq~e~~~~E~QL~~A~QKLkdA~~~~e~DPDevNK~ 45 (78)
T 2ic6_A 5 STLKEVQDNITLHEQRLVTTRQKLKDAERAVELDPDDVNKS 45 (78)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 56889999999999999888888766443 36788888776
No 37
>2kwh_A RAla-binding protein 1; GTPase activation, transport protein; NMR {Homo sapiens} PDB: 2kwi_B*
Probab=28.74 E-value=79 Score=20.89 Aligned_cols=49 Identities=12% Similarity=0.174 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCchhhHhHHHHHHHHhhhchhHHHHHHH
Q 038806 73 SYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCRKRLES 121 (162)
Q Consensus 73 ~Y~kE~~eq~~kvekmKaeg~DeydIKkQ~eVLeET~~MIPD~~~RL~~ 121 (162)
.-+.|+..|+.-++.+-.+-+.-+.=++-++-|=|.+++|--.+++|..
T Consensus 7 ~I~~El~kQe~lL~~LH~e~~ag~~~~~~eE~lWeVQriiTqLKRKLk~ 55 (56)
T 2kwh_A 7 GIKEEIRRQEFLLNSLHRDLQGGIKDLSKEERLWEVQRILTALKRKLRE 55 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSCCCSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHcc
Confidence 3567899999999998876444444556688899999999999988864
No 38
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A*
Probab=28.64 E-value=90 Score=27.29 Aligned_cols=80 Identities=15% Similarity=0.200 Sum_probs=52.0
Q ss_pred CCCCCcccccccccccchhhhhhHhHHHHHHHHHHHHHHHHH---HHHHH-HhhcCCCchhhHhHHHHHHHHhhhchhHH
Q 038806 41 TSPLPDQKVKMATVRNLKIKTSTCKRVVKELHSYEKEVEREA---AKTAD-MKEKGADPYDLKQQENVLAESRMMIPDCR 116 (162)
Q Consensus 41 ~~~~~~~~~~~~~lrqLkIKTgvVKRL~KE~~~Y~kE~~eq~---~kvek-mKaeg~DeydIKkQ~eVLeET~~MIPD~~ 116 (162)
...+|+.-...+..+.|.--.+.+-||+-+..+|+||..... .-|.- |+..|-. .++.+++...|+-++.
T Consensus 310 g~~lp~~v~~~p~~~~L~~~~~~i~rL~NDI~Sy~kE~~~gg~~~N~V~~~mke~g~S------~eeA~~~v~~~i~~~~ 383 (433)
T 3v1v_A 310 GYELPADLHARPDMQRVIALAGNATTIVNDLYSYTKELNSPGRHLNLPVVIAEREQLC------ERDAYLKAVEVHNELQ 383 (433)
T ss_dssp TCCCCHHHHTSHHHHHHHHHHHHHHHHHHHHHSHHHHTTSSSCCCCHHHHHHHHHTCC------HHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHhCchHHHHHHHHHHHHHHhchHHHHHHHHhcCCCCCcHHHHHHHhcCCC------HHHHHHHHHHHHHHHH
Confidence 346677655666677888889999999999999999985310 11111 1222211 2556777777887777
Q ss_pred HHHHHHHHHH
Q 038806 117 KRLESALAEL 126 (162)
Q Consensus 117 ~RL~~A~~dL 126 (162)
++.......|
T Consensus 384 ~~F~~~~~~L 393 (433)
T 3v1v_A 384 HSFEAAAADL 393 (433)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7766665544
No 39
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=28.60 E-value=1.8e+02 Score=21.66 Aligned_cols=31 Identities=10% Similarity=0.236 Sum_probs=25.7
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 038806 62 STCKRVVKELHSYEKEVEREAAKTADMKEKG 92 (162)
Q Consensus 62 gvVKRL~KE~~~Y~kE~~eq~~kvekmKaeg 92 (162)
..|++++++...++.|+.....+++.+.+.|
T Consensus 46 ~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G 76 (218)
T 3fb2_A 46 TGAEALLERHQEHRTEIDARAGTFQAFEQFG 76 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 5689999999999999998888887776543
No 40
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=28.53 E-value=1.3e+02 Score=22.65 Aligned_cols=44 Identities=27% Similarity=0.274 Sum_probs=29.9
Q ss_pred hchhHHHHHHHHHHHHHH--------HHHHHh--hcCCCchhHHHHHHHHHHHH
Q 038806 111 MIPDCRKRLESALAELKA--------ALTELE--EENQEGQEIEDARSTIADVE 154 (162)
Q Consensus 111 MIPD~~~RL~~A~~dL~~--------~l~e~e--~~~~~teEl~~Ake~L~~a~ 154 (162)
|=|....||+..+..|+. .+.+.. .|+.+..+|.+|++-+...+
T Consensus 6 ~T~~g~~~L~~El~~L~~~~rp~i~~~i~~A~~~gDlsENaeY~aak~~q~~~e 59 (158)
T 1grj_A 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCE 59 (158)
T ss_dssp EEHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhccchhhHhhHHHHHhcccccccchhhhHHHHHHHHH
Confidence 567788889988888876 333322 34557789999997654333
No 41
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=26.07 E-value=2e+02 Score=21.25 Aligned_cols=77 Identities=12% Similarity=0.122 Sum_probs=53.2
Q ss_pred ccccchhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHH
Q 038806 53 TVRNLKIKTSTCKRVVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCRKRLESALAELKAALTE 132 (162)
Q Consensus 53 ~lrqLkIKTgvVKRL~KE~~~Y~kE~~eq~~kvekmKaeg~DeydIKkQ~eVLeET~~MIPD~~~RL~~A~~dL~~~l~e 132 (162)
-..-|+.+-.+....+.+.. .+..+.++.+.++..+-...-.+++|..|..+=-.+=+..+.|+..-...|...+..
T Consensus 25 ei~~L~~~L~~AEeaL~~Kq---~~idelk~ei~q~~~~lE~I~vLkaQv~IY~~DF~aERadREkl~~eKe~L~~ql~~ 101 (110)
T 2v4h_A 25 QLEDLRQQLQQAEEALVAKQ---ELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQ 101 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchhhHHHHHhHHHHHHHHHHH
Confidence 45566666666666666543 344444455555555445567888999999988888888888888888888776654
No 42
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=25.73 E-value=86 Score=21.56 Aligned_cols=35 Identities=9% Similarity=0.151 Sum_probs=24.8
Q ss_pred cchhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 038806 56 NLKIKTSTCKRVVKELHSYEKEVEREAAKTADMKE 90 (162)
Q Consensus 56 qLkIKTgvVKRL~KE~~~Y~kE~~eq~~kvekmKa 90 (162)
+|.-|-..++.|-|++.-+..|+.+.+..++++++
T Consensus 34 ELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfrS 68 (72)
T 3nmd_A 34 ELRQRDALIDELELELDQKDELIQMLQNELDKYRS 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 44556667777777777777777777777777654
No 43
>3pvl_B Usher syndrome type-1G protein; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Homo sapiens}
Probab=25.17 E-value=23 Score=25.78 Aligned_cols=16 Identities=31% Similarity=0.781 Sum_probs=13.5
Q ss_pred cccccccCCCceeeEE
Q 038806 5 ARDLIFNSPSVGTFIV 20 (162)
Q Consensus 5 ~~~~~~~~~~~~~~~~ 20 (162)
-++-|||-|..|+.++
T Consensus 8 gh~SIFnRPGLG~mVF 23 (96)
T 3pvl_B 8 GHDSLFTRPGLGTMVF 23 (96)
T ss_pred cchhhccCCCCcceee
Confidence 4678999999999763
No 44
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=24.49 E-value=2.7e+02 Score=22.12 Aligned_cols=65 Identities=9% Similarity=0.074 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC-CCchhhHhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHH
Q 038806 67 VVKELHSYEKEVEREAAKTADMKEKG-ADPYDLKQQENVLAESRMMIPDCRKRLESALAELKAALT 131 (162)
Q Consensus 67 L~KE~~~Y~kE~~eq~~kvekmKaeg-~DeydIKkQ~eVLeET~~MIPD~~~RL~~A~~dL~~~l~ 131 (162)
--||+..+.+|++.++.++..+.++- .-...+......+++...-+-.....|...-..+...+.
T Consensus 88 ~~kE~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~~l~~~~~~~~~~~~ 153 (256)
T 3na7_A 88 SERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVK 153 (256)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55788888888888888887777631 111223333334444444444444444444444444443
No 45
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=24.12 E-value=1.2e+02 Score=23.47 Aligned_cols=14 Identities=14% Similarity=0.302 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHH
Q 038806 74 YEKEVEREAAKTAD 87 (162)
Q Consensus 74 Y~kE~~eq~~kvek 87 (162)
|..++...++.++.
T Consensus 58 ~~~~l~~a~a~l~~ 71 (277)
T 2f1m_A 58 YQATYDSAKGDLAK 71 (277)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444433
No 46
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=24.12 E-value=1.4e+02 Score=33.11 Aligned_cols=25 Identities=16% Similarity=0.311 Sum_probs=11.1
Q ss_pred chhhhhhHhHHHHHHHHHHHHHHHH
Q 038806 57 LKIKTSTCKRVVKELHSYEKEVERE 81 (162)
Q Consensus 57 LkIKTgvVKRL~KE~~~Y~kE~~eq 81 (162)
|..|+.-...++++...=.+|++++
T Consensus 1950 L~~k~~ea~~~l~~i~~~~~~ae~~ 1974 (3245)
T 3vkg_A 1950 LDVKNEQANQKLKQMVQDQQAAEIK 1974 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444444333
No 47
>2rdz_A Cytochrome C-552; decaheme, reductase, calcium, electron transport, iron, metal-binding, oxidoreductase, periplasm, transport; HET: HEC; 1.74A {Escherichia coli} SCOP: a.138.1.3 PDB: 1gu6_A* 3l1t_A* 3tor_A* 2rf7_A*
Probab=23.89 E-value=2.8e+02 Score=24.37 Aligned_cols=21 Identities=10% Similarity=0.175 Sum_probs=12.0
Q ss_pred CCchhHHHHHHHHHHHHHHhh
Q 038806 138 QEGQEIEDARSTIADVEKLFQ 158 (162)
Q Consensus 138 ~~teEl~~Ake~L~~a~~~le 158 (162)
..++++.+|+..+..|+-.|.
T Consensus 336 ~~~~~~~~~~~~~r~Aq~~wd 356 (452)
T 2rdz_A 336 ATEAEMKPIQDDIRHAQWRWD 356 (452)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 344566666666666655544
No 48
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=22.61 E-value=2.8e+02 Score=21.66 Aligned_cols=30 Identities=10% Similarity=0.095 Sum_probs=24.5
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 038806 61 TSTCKRVVKELHSYEKEVEREAAKTADMKE 90 (162)
Q Consensus 61 TgvVKRL~KE~~~Y~kE~~eq~~kvekmKa 90 (162)
..+|+.+++.+..++.|+......|+.+..
T Consensus 36 ~~~~~~ll~kh~~~~~el~~~~~~v~~l~~ 65 (326)
T 3kbt_A 36 EEGAIVMLKRHLRQQRAVEDYGRNIKQLAS 65 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457888999999999999888888877664
No 49
>2c5k_T Syntaxin TLG1, T-snare affecting A late golgi compartment protein 1; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae} PDB: 2c5j_A 2c5i_T
Probab=22.07 E-value=1.6e+02 Score=20.57 Aligned_cols=77 Identities=9% Similarity=0.262 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCC-chhhHhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHH
Q 038806 74 YEKEVEREAAKTADMKEKGAD-PYDLKQQENVLAESRMMIPDCRKRLESALAELKAALTELEEENQEGQEIEDARSTIAD 152 (162)
Q Consensus 74 Y~kE~~eq~~kvekmKaeg~D-eydIKkQ~eVLeET~~MIPD~~~RL~~A~~dL~~~l~e~e~~~~~teEl~~Ake~L~~ 152 (162)
.++++..+-..++.+-+.-+. +. + ++..=|-.+.+-|+.-+.||.+.+.-.+.. +..|+..=+..+..
T Consensus 11 V~~D~~~ql~~l~~~~~~~~~~~~--~-------~~~~El~~~l~el~e~l~DL~~SI~i~e~~--~~~EI~~Rk~~v~~ 79 (95)
T 2c5k_T 11 VVKDTKEQLNRINNYITRHNTAGD--D-------DQEEEIQDILKDVEETIVDLDRSIIVMKRD--ENEDVSGREAQVKN 79 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCC----C-------TTHHHHHHHHHHHHHHHHHHHHHHHHHHTS--TTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCCCC--H-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHH
Confidence 456677777777776543111 11 1 222333444555666667777766554433 66688888888888
Q ss_pred HHHHhhhhc
Q 038806 153 VEKLFQTTE 161 (162)
Q Consensus 153 a~~~le~~~ 161 (162)
++..++++.
T Consensus 80 l~~~i~~lk 88 (95)
T 2c5k_T 80 IKQQLDALK 88 (95)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888777653
No 50
>2l2l_B Methyl-CPG-binding domain protein 2; DNA methylation, coiled-coil, NURD, MBD2, P66alpha, transfer; NMR {Homo sapiens}
Probab=21.70 E-value=98 Score=18.74 Aligned_cols=22 Identities=41% Similarity=0.619 Sum_probs=14.4
Q ss_pred chhhHhHHHHHHHHhhhchhHHHHHHHHH
Q 038806 95 PYDLKQQENVLAESRMMIPDCRKRLESAL 123 (162)
Q Consensus 95 eydIKkQ~eVLeET~~MIPD~~~RL~~A~ 123 (162)
+-||++|++-+. .+++||+.|+
T Consensus 9 e~DIr~QE~rV~-------~aR~rL~eaL 30 (36)
T 2l2l_B 9 DEDIRKQEERVQ-------QVRKKLEEAL 30 (36)
T ss_dssp HHHHHHHHHHHH-------HHHHHHHHHH
T ss_pred HHHHHHHHHHHH-------HHHHHHHHHH
Confidence 457888887654 3456666664
No 51
>3fo3_A Eight-heme nitrite reductase; alpha protein, eight hemes C, oxidoreductase; HET: HEC PG6 PG4; 1.40A {Thioalkalivibrio nitratireducens} PDB: 3d1i_A* 3f29_A* 2zo5_A* 3gm6_A* 3lg1_A* 3lgq_A* 3mmo_A* 2ot4_A* 3uu9_A* 3rkh_A* 3sce_A* 3s7w_A* 3owm_A* 3sxq_A* 3ttb_A*
Probab=20.99 E-value=3.1e+02 Score=25.18 Aligned_cols=22 Identities=14% Similarity=0.182 Sum_probs=14.8
Q ss_pred CCCchhHHHHHHHHHHHHHHhh
Q 038806 137 NQEGQEIEDARSTIADVEKLFQ 158 (162)
Q Consensus 137 ~~~teEl~~Ake~L~~a~~~le 158 (162)
..+.+++.+|++++..|+-.|.
T Consensus 459 Ga~e~~m~~a~~~~R~AQwrWD 480 (525)
T 3fo3_A 459 GVSEDVLNQARELHYDAHLYWE 480 (525)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhh
Confidence 3466777777777777765554
No 52
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=20.87 E-value=99 Score=19.68 Aligned_cols=27 Identities=19% Similarity=0.202 Sum_probs=20.9
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 038806 64 CKRVVKELHSYEKEVEREAAKTADMKE 90 (162)
Q Consensus 64 VKRL~KE~~~Y~kE~~eq~~kvekmKa 90 (162)
+.++..++..+.+|..+.+.+++.++.
T Consensus 29 Ld~v~~~~~~l~~e~~~L~~~~~~l~~ 55 (57)
T 2wuj_A 29 LAQVRKDYEIVLRKKTELEAKVNELDE 55 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 677888999999999999998887764
No 53
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=20.73 E-value=37 Score=25.13 Aligned_cols=15 Identities=20% Similarity=0.348 Sum_probs=9.2
Q ss_pred hhHhHHHHHHHHHHH
Q 038806 62 STCKRVVKELHSYEK 76 (162)
Q Consensus 62 gvVKRL~KE~~~Y~k 76 (162)
|+.+||.||+...++
T Consensus 1 g~~~RL~kEl~~l~~ 15 (149)
T 2r0j_A 1 GIPRRITKETQNLAN 15 (149)
T ss_dssp -CCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 566777777765543
No 54
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=20.56 E-value=2.6e+02 Score=20.48 Aligned_cols=31 Identities=6% Similarity=0.167 Sum_probs=26.1
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 038806 61 TSTCKRVVKELHSYEKEVEREAAKTADMKEK 91 (162)
Q Consensus 61 TgvVKRL~KE~~~Y~kE~~eq~~kvekmKae 91 (162)
...|.-|+|.+..++.++.....++..+.+.
T Consensus 139 ~~~v~~llkkh~~f~~~l~~~~~~i~~l~~~ 169 (214)
T 1s35_A 139 LEAAEAGIRKFEDFLGSMENNRDKVLSPVDS 169 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3678899999999999999999998887653
No 55
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=20.37 E-value=1.4e+02 Score=24.10 Aligned_cols=20 Identities=20% Similarity=0.200 Sum_probs=9.5
Q ss_pred CchhHHHHHHHHHHHHHHhh
Q 038806 139 EGQEIEDARSTIADVEKLFQ 158 (162)
Q Consensus 139 ~teEl~~Ake~L~~a~~~le 158 (162)
...+|..|+..+..++..++
T Consensus 127 s~~~~~~a~~~~~~a~a~l~ 146 (359)
T 3lnn_A 127 AKRDFEQAQSDYDQAASESQ 146 (359)
T ss_dssp CCTTHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 33455555555544444443
No 56
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=20.33 E-value=2e+02 Score=19.05 Aligned_cols=30 Identities=13% Similarity=0.348 Sum_probs=26.3
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 038806 62 STCKRVVKELHSYEKEVEREAAKTADMKEK 91 (162)
Q Consensus 62 gvVKRL~KE~~~Y~kE~~eq~~kvekmKae 91 (162)
..|.-|+|.+..+++++.....++..+...
T Consensus 36 ~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~ 65 (107)
T 2spc_A 36 GNVEALIKKHEDFDKAINGHEQKIAALQTV 65 (107)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999888764
Done!