BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038808
MLQLRESDNEVSEANSDASEESIIKSETDEPVTTTNTYPLLDHLFLDRSCDSLKMFITRP
IPKSPNLDSVSITKDHMSLAILDIKQCPKIVSFPERGLPLATPNLKLFVILDWKILEVIP
NLRHSLSFLTELFIQECPKLVSTPGSFPETLRKLSIVSCHKFRPRRDWRLHKLENLRSLI
NIEDG

High Scoring Gene Products

Symbol, full name Information P value
AT3G14460 protein from Arabidopsis thaliana 1.9e-18

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038808
        (185 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2091662 - symbol:AT3G14460 species:3702 "Arabi...   237  1.9e-18   1


>TAIR|locus:2091662 [details] [associations]
            symbol:AT3G14460 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
            Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000767
            InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006952 GO:GO:0043531
            InterPro:IPR025875 Pfam:PF12799 EMBL:AB028617 IPI:IPI00537428
            RefSeq:NP_188064.1 UniGene:At.65087 ProteinModelPortal:Q9LRR5
            SMR:Q9LRR5 PRIDE:Q9LRR5 EnsemblPlants:AT3G14460.1 GeneID:820669
            KEGG:ath:AT3G14460 TAIR:At3g14460 eggNOG:NOG295903
            HOGENOM:HOG000238375 InParanoid:Q9LRR5 OMA:AVISARY PhylomeDB:Q9LRR5
            ProtClustDB:CLSN2684935 Genevestigator:Q9LRR5 GermOnline:AT3G14460
            Uniprot:Q9LRR5
        Length = 1424

 Score = 237 (88.5 bits), Expect = 1.9e-18, P = 1.9e-18
 Identities = 62/172 (36%), Positives = 90/172 (52%)

Query:    30 EPVTTTNTYPLLDHLFLDRSCDSLKMFITRPIPKSPNLDSVSITK--------------- 74
             E +  T +Y  L++LF+  SC +L  F   P+   P L S+SI                 
Sbjct:  1156 ESLQPTRSYSQLEYLFIGSSCSNLVNF---PLSLFPKLRSLSIRDCESFKTFSIHAGLGD 1212

Query:    75 DHMSLAILDIKQCPKIVSFPERGLPLATPNLKLFVILDWKILEVIPNLRHSLSFLTELFI 134
             D ++L  L+I+ CP + +FP+ GLP  TP L   ++ + K L+ +P     L+ L  LFI
Sbjct:  1213 DRIALESLEIRDCPNLETFPQGGLP--TPKLSSMLLSNCKKLQALPEKLFGLTSLLSLFI 1270

Query:   135 QECPKLVSTPGS-FPETLRKLSIVSCHKFRPRRDWRLHKLENLRSLINIEDG 185
              +CP++ + PG  FP  LR L I  C K  PR +W L  LENLR+L  I+ G
Sbjct:  1271 IKCPEIETIPGGGFPSNLRTLCISLCDKLTPRIEWGLRDLENLRNL-EIDGG 1321


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      185       185   0.00080  110 3  11 22  0.44    32
                                                     31  0.41    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  582 (62 KB)
  Total size of DFA:  153 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.03u 0.11s 20.14t   Elapsed:  00:00:01
  Total cpu time:  20.03u 0.11s 20.14t   Elapsed:  00:00:01
  Start:  Mon May 20 23:35:58 2013   End:  Mon May 20 23:35:59 2013

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