BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038810
(164 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TFY|A Chain A, Naa50p Amino-Terminal Acetyltransferase Bound To Substrate
Peptide Fragment And Coa
pdb|3TFY|B Chain B, Naa50p Amino-Terminal Acetyltransferase Bound To Substrate
Peptide Fragment And Coa
pdb|3TFY|C Chain C, Naa50p Amino-Terminal Acetyltransferase Bound To Substrate
Peptide Fragment And Coa
Length = 169
Score = 172 bits (435), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 2/157 (1%)
Query: 9 ISLDGVRDKNLMQLKKLNIALFPVRYNDKYYSDALASGEFTKLAYYSDICVGAIACRLEK 68
I L V N+ QLK+LN +FPV YNDK+Y D L GE KLAY++DI VGA+ CR++
Sbjct: 6 IELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVCCRVDH 65
Query: 69 KEGGAICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQ-NISEVYLHVQTNNEDAINFY 127
+ +YIMTLG LAPYR LGIGTK+LNHVL++C K +YLHVQ +NE AI+FY
Sbjct: 66 SQNQKR-LYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFY 124
Query: 128 KKFGFDITDTIKNYYTNITPPDCYVLTKFITQPQPKN 164
+KFGF+I +T KNYY I P D +VL K + P +N
Sbjct: 125 RKFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQN 161
>pdb|2OB0|A Chain A, Human Mak3 Homolog In Complex With Acetyl-Coa
pdb|2OB0|B Chain B, Human Mak3 Homolog In Complex With Acetyl-Coa
pdb|2OB0|C Chain C, Human Mak3 Homolog In Complex With Acetyl-Coa
pdb|2PSW|A Chain A, Human Mak3 Homolog In Complex With Coa
pdb|2PSW|B Chain B, Human Mak3 Homolog In Complex With Coa
pdb|2PSW|C Chain C, Human Mak3 Homolog In Complex With Coa
Length = 170
Score = 167 bits (424), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 106/157 (67%), Gaps = 2/157 (1%)
Query: 9 ISLDGVRDKNLMQLKKLNIALFPVRYNDKYYSDALASGEFTKLAYYSDICVGAIACRLEK 68
I L V N+ QLK+LN +FPV YNDK+Y D L GE KLAY++DI VGA+ CR++
Sbjct: 7 IELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVCCRVDH 66
Query: 69 KEGGAICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQ-NISEVYLHVQTNNEDAINFY 127
+ +YI TLG LAPYR LGIGTK LNHVL++C K +YLHVQ +NE AI+FY
Sbjct: 67 SQNQKR-LYIXTLGCLAPYRRLGIGTKXLNHVLNICEKDGTFDNIYLHVQISNESAIDFY 125
Query: 128 KKFGFDITDTIKNYYTNITPPDCYVLTKFITQPQPKN 164
+KFGF+I +T KNYY I P D +VL K + P +N
Sbjct: 126 RKFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQN 162
>pdb|2VI7|A Chain A, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
pdb|2VI7|B Chain B, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
pdb|2VI7|C Chain C, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
Length = 177
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 65 RLEKKEGGAICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAK-QNISEVYLHVQTNNEDA 123
R+ + G+I +GV ++G G+G++LL +LD+ N+ V L V T+N A
Sbjct: 80 RIRRSHSGSIG-----MGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPA 134
Query: 124 INFYKKFGFDITDTIKNY 141
+ Y+KFGF+ +++Y
Sbjct: 135 LALYRKFGFETEGEMRDY 152
>pdb|1TIQ|A Chain A, Crystal Structure Of An Acetyltransferase (Paia) In
Complex With Coa And Dtt From Bacillus Subtilis,
Northeast Structural Genomics Target Sr64.
pdb|1TIQ|B Chain B, Crystal Structure Of An Acetyltransferase (Paia) In
Complex With Coa And Dtt From Bacillus Subtilis,
Northeast Structural Genomics Target Sr64
Length = 180
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 67 EKKEGGAICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINF 126
+ +E GA + I + + ++ G+G LLN +++ ++N ++L V NE+AI F
Sbjct: 82 QSEEXGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAF 141
Query: 127 YKKFGF 132
YKK GF
Sbjct: 142 YKKXGF 147
>pdb|2X7B|A Chain A, Crystal Structure Of The N-Terminal Acetylase Ard1 From
Sulfolobus Solfataricus P2
Length = 168
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 4 GREVAISLDGVRDKNLMQLKKLNIALFPVRYNDKYYSDALAS-GEFTKLAYYSDICVGAI 62
GR+ +L R ++ Q+ K+N P Y ++ + L G +A + VG I
Sbjct: 10 GRD--FTLRNARMDDIDQIIKINRLTLPENYPYYFFVEHLKEYGLAFFVAIVDNSVVGYI 67
Query: 63 ACRLEK-----KEGGAICV--YIMTLGVLAPYRGLGIGTKLLNHVL-DLCAKQNISEVYL 114
R+E K+ ++ +++++ VL YR GI T LL + + N E+YL
Sbjct: 68 MPRIEWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYL 127
Query: 115 HVQTNNEDAINFYKKFGFDITDTIKNYYTNITPPDCYVLTK 155
V+ +N AI Y+K F +K YY + D Y++ +
Sbjct: 128 EVRVSNYPAIALYEKLNFKKVKVLKGYYAD--GEDAYLMAR 166
>pdb|2AE6|A Chain A, Crystal Structure Of Acetyltransferase Of Gnat Family From
Enterococcus Faecalis V583
pdb|2AE6|B Chain B, Crystal Structure Of Acetyltransferase Of Gnat Family From
Enterococcus Faecalis V583
pdb|2AE6|C Chain C, Crystal Structure Of Acetyltransferase Of Gnat Family From
Enterococcus Faecalis V583
pdb|2AE6|D Chain D, Crystal Structure Of Acetyltransferase Of Gnat Family From
Enterococcus Faecalis V583
Length = 166
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 77 YIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF 132
+++++GV ++ GIG LL+++ D I ++ L V N++AI FY+K GF
Sbjct: 83 WLLSIGVSPDFQDQGIGGSLLSYIKDXAEISGIHKLSLRVXATNQEAIRFYEKHGF 138
>pdb|3BJ7|A Chain A, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ7|B Chain B, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ7|C Chain C, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ7|D Chain D, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|A Chain A, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|B Chain B, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|C Chain C, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|D Chain D, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
Length = 171
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 76 VYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFG 131
+Y+ V++ YRG GIG+++L ++ + K S ++ V NE +INFYK+ G
Sbjct: 89 LYLEDFFVMSDYRGFGIGSEILKNLSQVAMKCRCSSMHFLVAEWNEPSINFYKRRG 144
>pdb|2FXF|A Chain A, Human SpermidineSPERMINE N1-Acetyltransferase
pdb|2FXF|B Chain B, Human SpermidineSPERMINE N1-Acetyltransferase
Length = 170
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 76 VYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFG 131
+Y+ V++ YRG GIG+++L ++ + + S ++ V NE +INFYK+ G
Sbjct: 88 LYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRG 143
>pdb|2F5I|A Chain A, X-Ray Structure Of SpermidineSPERMINE N1-Acetyltransferase
(Sat) From Homo Sapiens
pdb|2F5I|B Chain B, X-Ray Structure Of SpermidineSPERMINE N1-Acetyltransferase
(Sat) From Homo Sapiens
pdb|2G3T|A Chain A, Crsytal Structure Of Human SpermidineSPERMINE N1-
Acetyltransferase (Hssat)
pdb|2G3T|B Chain B, Crsytal Structure Of Human SpermidineSPERMINE N1-
Acetyltransferase (Hssat)
Length = 179
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 76 VYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFG 131
+Y+ V++ YRG GIG+++L ++ + + S ++ V NE +INFYK+ G
Sbjct: 89 LYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRG 144
>pdb|2JEV|A Chain A, Crystal Structure Of Human Spermine,Spermidine
Acetyltransferase In Complex With A Bisubstrate Analog
(N1- Acetylspermine-S-Coa).
pdb|2JEV|B Chain B, Crystal Structure Of Human Spermine,Spermidine
Acetyltransferase In Complex With A Bisubstrate Analog
(N1- Acetylspermine-S-Coa)
Length = 174
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 76 VYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFG 131
+Y+ V++ YRG GIG+++L ++ + + S ++ V NE +INFYK+ G
Sbjct: 92 LYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRG 147
>pdb|2B3U|A Chain A, Human Spermine Spermidine Acetyltransferase K26r Mutant
pdb|2B3U|B Chain B, Human Spermine Spermidine Acetyltransferase K26r Mutant
pdb|2B3V|A Chain A, Spermine Spermidine Acetyltransferase In Complex With
Acetylcoa, K26r Mutant
pdb|2B4B|A Chain A, Ssat+coa+be-3-3-3, K6r Mutant
pdb|2B4B|B Chain B, Ssat+coa+be-3-3-3, K6r Mutant
pdb|2B58|A Chain A, Ssat With Coa_sp, Spermine Disordered, K26r Mutant
Length = 171
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 76 VYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFG 131
+Y+ V + YRG GIG+++L ++ + + S + V NE +INFYK+ G
Sbjct: 89 LYLEDFFVXSDYRGFGIGSEILKNLSQVAXRCRCSSXHFLVAEWNEPSINFYKRRG 144
>pdb|2B4D|A Chain A, Ssat+coa+sp- Sp Disordered
pdb|2B5G|A Chain A, Wild Type Ssat- 1.7a Structure
Length = 171
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 76 VYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFG 131
+Y+ V + YRG GIG+++L ++ + + S + V NE +INFYK+ G
Sbjct: 89 LYLEDFFVXSDYRGFGIGSEILKNLSQVAXRCRCSSXHFLVAEWNEPSINFYKRRG 144
>pdb|2CNM|A Chain A, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNM|B Chain B, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNM|C Chain C, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNS|A Chain A, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNS|B Chain B, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNS|C Chain C, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNT|A Chain A, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|B Chain B, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|C Chain C, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|D Chain D, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea
Length = 160
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 87 YRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDITDTIKNYY 142
++ G+G LL H++D + + ++L V+ +N AI Y+ GF+ +NYY
Sbjct: 75 FQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATIRRNYY 130
>pdb|2B4D|B Chain B, Ssat+coa+sp- Sp Disordered
pdb|2B5G|B Chain B, Wild Type Ssat- 1.7a Structure
Length = 171
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 76 VYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFG 131
+Y+ V + YRG GIG+++L ++ + + S + V NE +INFYK+ G
Sbjct: 89 LYLEDFFVXSDYRGFGIGSEILKNLSQVAXRCRCSSXHFLVAEWNEPSINFYKRRG 144
>pdb|1WWZ|A Chain A, Crystal Structure Of Ph1933 From Pyrococcus Horikoshii Ot3
pdb|1WWZ|B Chain B, Crystal Structure Of Ph1933 From Pyrococcus Horikoshii Ot3
Length = 159
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 51 LAYYSDICVGAIACRLE--KKEGGAICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQN 108
+A D VG I C + K G I I V ++G GIG KLL LD K N
Sbjct: 59 VAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCLDFLGKYN 118
Query: 109 ISEVYLHVQTNNEDAINFYKKFGF 132
+ L V N A+N Y+KFGF
Sbjct: 119 -DTIELWVGEKNYGAMNLYEKFGF 141
>pdb|2GE3|A Chain A, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
pdb|2GE3|B Chain B, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
pdb|2GE3|C Chain C, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
pdb|2GE3|D Chain D, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
Length = 170
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 79 MTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF 132
+ G+L YR G+G +L LD + + + L V +N AI Y+K GF
Sbjct: 89 LGXGILPAYRNKGLGARLXRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGF 142
>pdb|2KCW|A Chain A, Solution Structure Of Apo-Form Yjab From Escherichia Coli
Length = 147
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 88 RGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDIT 135
RG G+G L+ H L + E+ +V NE A+ FYKK GF +T
Sbjct: 83 RGCGVGRVLVEHALSMA-----PELTTNVNEQNEQAVGFYKKVGFKVT 125
>pdb|3LD2|A Chain A, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|B Chain B, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|C Chain C, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|D Chain D, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
Length = 197
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 77 YIMTLG--VLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDI 134
+I+T G V R GIG L+ L+ K + +V +HV ++N++A+ FYKK GFD+
Sbjct: 109 HIVTFGIAVAEKERRKGIGRALVQIFLNEV-KSDYQKVLIHVLSSNQEAVLFYKKLGFDL 167
>pdb|3TT2|A Chain A, Crystal Structure Of Gcn5-Related N-Acetyltransferase From
Sphaerobacter Thermophilus
Length = 330
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 77 YIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNE-DAINFYKKFGFDIT 135
+I ++GV P+RG GI LL V + ++ + EV L V + A Y++ G +
Sbjct: 248 WIGSVGVRRPWRGRGIALALLQEVFGVYYRRGVREVELSVDAESRTGAPRLYRRAGXHVK 307
Query: 136 DTIKNYYTNITP 147
+ I P
Sbjct: 308 HRYVLHRKEIRP 319
>pdb|2BEI|A Chain A, X-Ray Structure Of Thialysine N-Acetyltransferase (Ssat2)
From Homo Sapiens
pdb|2BEI|B Chain B, X-Ray Structure Of Thialysine N-Acetyltransferase (Ssat2)
From Homo Sapiens
pdb|2Q4V|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Thialysine N- Acetyltransferase (Ssat2) From Homo
Sapiens
pdb|2Q4V|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
Thialysine N- Acetyltransferase (Ssat2) From Homo
Sapiens
Length = 170
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 76 VYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF-DI 134
+Y+ + V YRG GIG+K++ V ++ + S+ L V N+ A + YK G D+
Sbjct: 89 IYLEDIYVXPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAXDLYKALGAQDL 148
Query: 135 TDT 137
T+
Sbjct: 149 TEA 151
>pdb|3PP9|A Chain A, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
pdb|3PP9|B Chain B, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
pdb|3PP9|C Chain C, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
Length = 187
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%)
Query: 77 YIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDI 134
YI + V YR LG+G +L+ + N + L Q NN A FY+K GF I
Sbjct: 102 YIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNXPGIXLETQNNNVAACKFYEKCGFVI 159
>pdb|1ON0|A Chain A, Crystal Structure Of Putative Acetyltransferase (yycn)
From Bacillus Subtilis, Northeast Structural Genomics
Consortium Target Sr144
pdb|1ON0|B Chain B, Crystal Structure Of Putative Acetyltransferase (yycn)
From Bacillus Subtilis, Northeast Structural Genomics
Consortium Target Sr144
pdb|1ON0|C Chain C, Crystal Structure Of Putative Acetyltransferase (yycn)
From Bacillus Subtilis, Northeast Structural Genomics
Consortium Target Sr144
pdb|1ON0|D Chain D, Crystal Structure Of Putative Acetyltransferase (yycn)
From Bacillus Subtilis, Northeast Structural Genomics
Consortium Target Sr144
Length = 158
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 76 VYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDIT 135
+I G+ PYRG G + L + I ++ LHV +N+ A Y++ GF T
Sbjct: 89 AFIYDFGLYEPYRGKGYAKQALAALDQAARSXGIRKLSLHVFAHNQTARKLYEQTGFQET 148
Query: 136 DTIKN 140
D + +
Sbjct: 149 DVVXS 153
>pdb|3FB3|A Chain A, Crystal Structure Of Trypanosoma Brucei Acetyltransferase,
Tb11.01.2886
pdb|3FB3|B Chain B, Crystal Structure Of Trypanosoma Brucei Acetyltransferase,
Tb11.01.2886
pdb|3I3G|A Chain A, Crystal Structure Of Trypanosoma Brucei
N-Acetyltransferase (Tb11.01.2886) At 1.86a
pdb|3I3G|B Chain B, Crystal Structure Of Trypanosoma Brucei
N-Acetyltransferase (Tb11.01.2886) At 1.86a
Length = 161
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 59 VGAIACRLEKK--EGGAICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHV 116
VG+ + ++ K GG +I + V YRG G+G L ++DLC Y +
Sbjct: 78 VGSASLMIQPKFTRGGRAVGHIEDVVVDPSYRGAGLGKAL---IMDLCEISRSKGCYKVI 134
Query: 117 QTNNEDAINFYKKFGF 132
++E ++ FY+K GF
Sbjct: 135 LDSSEKSLPFYEKLGF 150
>pdb|1UFH|A Chain A, Structure Of Putative Acetyltransferase, Yycn Protein Of
Bacillus Subtilis
pdb|1UFH|B Chain B, Structure Of Putative Acetyltransferase, Yycn Protein Of
Bacillus Subtilis
Length = 180
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 76 VYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDIT 135
+I G+ PYRG G + L + I ++ LHV +N+ A Y++ GF T
Sbjct: 113 AFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQET 172
Query: 136 DTI 138
D +
Sbjct: 173 DVV 175
>pdb|1VKC|A Chain A, Putative Acetyl Transferase From Pyrococcus Furiosus
pdb|1VKC|B Chain B, Putative Acetyl Transferase From Pyrococcus Furiosus
Length = 158
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 77 YIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF 132
YI + V+ RGLGIG+ LL + ++ ++ L V+ +N A+ +Y++ G+
Sbjct: 93 YIYDIEVVKWARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDN-PAVKWYEERGY 147
>pdb|1U6M|A Chain A, The Crystal Structure Of Acetyltransferase
pdb|1U6M|B Chain B, The Crystal Structure Of Acetyltransferase
pdb|1U6M|C Chain C, The Crystal Structure Of Acetyltransferase
pdb|1U6M|D Chain D, The Crystal Structure Of Acetyltransferase
Length = 199
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 77 YIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF-DIT 135
Y+ T+ V +RG+GIG+KLL+ + ++ + L+V +N A Y GF D+T
Sbjct: 114 YLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVT 173
Query: 136 D-TIKNYYTN 144
TI + N
Sbjct: 174 TMTISGHLYN 183
>pdb|2FE7|A Chain A, The Crystal Structure Of A Probable N-Acetyltransferase
From Pseudomonas Aeruginosa
pdb|2FE7|B Chain B, The Crystal Structure Of A Probable N-Acetyltransferase
From Pseudomonas Aeruginosa
Length = 166
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 76 VYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDIT 135
+Y+ L V YRG+G G +LL + + + V N+ AI+FY+ G
Sbjct: 89 IYLEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGALPQ 148
Query: 136 DTIKNY 141
D Y
Sbjct: 149 DEWVRY 154
>pdb|2J8M|A Chain A, Structure Of P. Aeruginosa Acetyltransferase Pa4866
pdb|2J8M|B Chain B, Structure Of P. Aeruginosa Acetyltransferase Pa4866
pdb|2J8N|A Chain A, Structure Of P. Aeruginosa Acetyltransferase Pa4866 Solved
At Room Temperature
pdb|2J8N|B Chain B, Structure Of P. Aeruginosa Acetyltransferase Pa4866 Solved
At Room Temperature
pdb|2J8R|A Chain A, Structure Of P. Aeruginosa Acetyltransferase Pa4866 Solved
In Complex With L-Methionine Sulfoximine
pdb|2J8R|B Chain B, Structure Of P. Aeruginosa Acetyltransferase Pa4866 Solved
In Complex With L-Methionine Sulfoximine
Length = 172
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 28/48 (58%)
Query: 88 RGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDIT 135
RG G+G +LL +++ Q + + +++ N +I +++ GF+I+
Sbjct: 95 RGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEIS 142
>pdb|3D8P|A Chain A, Crystal Structure Of Acetyltransferase Of Gnat Family
(Np_373092.1) From Staphylococcus Aureus Mu50 At 2.20 A
Resolution
pdb|3D8P|B Chain B, Crystal Structure Of Acetyltransferase Of Gnat Family
(Np_373092.1) From Staphylococcus Aureus Mu50 At 2.20 A
Resolution
Length = 163
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 87 YRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF 132
YR L IG KLL+ V+ C +QNI +YL A FY GF
Sbjct: 90 YRNLKIGKKLLDKVIXTCKEQNIDGIYLGTIDKFISAQYFYSNNGF 135
>pdb|2BL1|A Chain A, Crystal Structure Of A Putative Phosphinothricin
Acetyltransferase (Pa4866) From Pseudomonas Aeruginosa
Pac1
Length = 172
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 27/48 (56%)
Query: 88 RGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDIT 135
RG G+G +LL +++ Q + +++ N +I +++ GF+I+
Sbjct: 95 RGKGLGVQLLQALIERARAQGLHVXVAAIESGNAASIGLHRRLGFEIS 142
>pdb|1YVO|A Chain A, Hypothetical Acetyltransferase From P.Aeruginosa Pa01
pdb|1YVO|B Chain B, Hypothetical Acetyltransferase From P.Aeruginosa Pa01
Length = 172
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 27/48 (56%)
Query: 88 RGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDIT 135
RG G+G +LL +++ Q + +++ N +I +++ GF+I+
Sbjct: 95 RGKGLGVQLLQALIERARAQGLHVXVAAIESGNAASIGLHRRLGFEIS 142
>pdb|3EC4|A Chain A, Crystal Structure Of Putative Acetyltransferase From The
Gnat Family (yp_497011.1) From Novosphingobium
Aromaticivorans Dsm 12444 At 1.80 A Resolution
pdb|3EC4|B Chain B, Crystal Structure Of Putative Acetyltransferase From The
Gnat Family (yp_497011.1) From Novosphingobium
Aromaticivorans Dsm 12444 At 1.80 A Resolution
Length = 228
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 87 YRGLGIGTKLLNHVLDLCAKQNISEV-YLHVQTNNEDAINFYKKFGF 132
YRG G+ +L+ V+ A + EV YLH +N AI Y+ GF
Sbjct: 169 YRGRGLAARLIRKVIAGXAARG--EVPYLHSYASNASAIRLYESLGF 213
>pdb|2I79|A Chain A, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|B Chain B, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|C Chain C, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|D Chain D, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|E Chain E, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|F Chain F, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
Length = 172
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 91 GIGTKLLNHVLDLCAKQNI-SEVYLHVQTNNEDAINFYKKFGFDITDTIKN--YYTNITP 147
G+G+ LL ++ I + L VQT N+ A++ Y+K GF I + + Y
Sbjct: 102 GLGSLLLEEAIEWAQASGILRRLQLTVQTRNQAAVHLYQKHGFVIEGSQERGAYIEEGKF 161
Query: 148 PDCYVLTKFI 157
D Y++ K I
Sbjct: 162 IDVYLMGKLI 171
>pdb|3EG7|A Chain A, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|B Chain B, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|C Chain C, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|D Chain D, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|E Chain E, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|F Chain F, Spermidine N1-Acetyltransferase From Vibrio Cholerae
Length = 176
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 83 VLAP-YRGLGIGTKLLNHVLDLCAK-QNISEVYLHVQTNNEDAINFYKKFGF 132
++AP ++G G L+N LD N+ ++YLHV N A++ Y++ GF
Sbjct: 91 IIAPEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEECGF 142
>pdb|2G3A|A Chain A, Crystal Structure Of Putative Acetyltransferase From
Agrobacterium Tumefaciens
Length = 152
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 75 CVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF 132
+Y+ L V RG GI KLL + K+ Y + T N DA+ Y+++GF
Sbjct: 75 WLYVQLLFVPEAXRGQGIAPKLLAXAEEEARKRGCXGAY--IDTXNPDALRTYERYGF 130
>pdb|2PDO|A Chain A, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|B Chain B, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|C Chain C, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|D Chain D, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|E Chain E, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|F Chain F, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|G Chain G, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|H Chain H, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
Length = 144
Score = 33.5 bits (75), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 81 LGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDITDTI 138
LGV +RG GI LLN + + ++ ++V +N+ + Y++ G++ D +
Sbjct: 75 LGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDXVLGXYERLGYEHADVL 132
>pdb|1BO4|A Chain A, Crystal Structure Of A Gcn5-Related N-Acetyltransferase:
Serratia Marescens Aminoglycoside 3-N-Acetyltransferase
pdb|1BO4|B Chain B, Crystal Structure Of A Gcn5-Related N-Acetyltransferase:
Serratia Marescens Aminoglycoside 3-N-Acetyltransferase
Length = 168
Score = 33.1 bits (74), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Query: 35 NDKYYSDALASGEFTKLAYY-SDICVGAIACR-LEKKEGGAICVYIMTLGVLAPYRGLGI 92
+ Y + L S F LA + + VGA+A L K E +YI L V +R GI
Sbjct: 63 DSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRSEIYIYDLAVSGEHRRQGI 122
Query: 93 GTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF 132
T L+N + +Y+ ++ A+ Y K G
Sbjct: 123 ATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLGI 162
>pdb|2QEC|A Chain A, Crystal Structure Of Histone Acetyltransferase Hpa2 And
Related Acetyltransferase (np_600742.1) From
Corynebacterium Glutamicum Atcc 13032 At 1.90 A
Resolution
Length = 204
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 77 YIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF 132
Y+ T+ + RG G+G+ LLNH + A+ +YL + A Y + GF
Sbjct: 127 YLYTVATSSSARGTGVGSALLNHGI---ARAGDEAIYLEATSTR--AAQLYNRLGF 177
>pdb|2ATR|A Chain A, Acetyltransferase, Gnat Family Protein Sp0256 From
Streptococcus Pneumoniae Tigr4
Length = 138
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 13/99 (13%)
Query: 42 ALASGEFTKLAYYSDICVGAIACRLEKKEGGAICVYIMTLGVLAPYRGLGIGTKLLNHVL 101
AL+ LA D VG I RL G V++ L VL Y+ GIG+ L L
Sbjct: 37 ALSHSLVIYLALDGDAVVGLI--RLVGD--GFSSVFVQDLIVLPSYQRQGIGSSLXKEAL 92
Query: 102 DLCAKQNISEVYLHVQTNNEDA---INFYKKFGFDITDT 137
N E Y VQ E+ + FY+ GF+I T
Sbjct: 93 G-----NFKEAY-QVQLATEETEKNVGFYRSXGFEILST 125
>pdb|3EY5|A Chain A, Putative Acetyltransferase From Gnat Family From
Bacteroides Thetaiotaomicron
Length = 181
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 77 YIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDITD 136
Y+ R G G + L H+ + + + EV V+ + INFY++ GF + +
Sbjct: 75 YVEHFATNPALRNGGYGKRTLEHLCEFLKRPIVLEVERPVEEXAKRRINFYQRHGFTLWE 134
Query: 137 TIKNYYTNITPP 148
K+YY PP
Sbjct: 135 --KDYY---QPP 141
>pdb|1QST|A Chain A, Crystal Structure Of Tetrahymena Gcn5
Length = 160
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 58 CVGAIACRLEKKEGGAICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQ 117
+G I R K + A + L V A + G GT+L+N D KQNI YL
Sbjct: 58 VIGGICFRQYKPQRFAEVAF---LAVTANEQVRGYGTRLMNKFKDHMQKQNIE--YLLTY 112
Query: 118 TNNEDAINFYKKFGF 132
+N AI ++KK GF
Sbjct: 113 ADNF-AIGYFKKQGF 126
>pdb|1QSN|A Chain A, Crystal Structure Of Tetrahymena Gcn5 With Bound Coenzyme
A And Histone H3 Peptide
pdb|1QSR|A Chain A, Crystal Structure Of Tetrahymena Gcn5 With Bound Acetyl-
Coenzyme A
pdb|1Q2C|A Chain A, Crystal Structure Of Tetrahymena Gcn5 With Bound Coenzyme
A And A 19- Residue Histone H4 Peptide
pdb|1Q2D|A Chain A, Crystal Structure Of Tetrahymena Gcn5 With Bound Coenzyme
A And A 19-Residue P53 Peptide
Length = 162
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 58 CVGAIACRLEKKEGGAICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQ 117
+G I R K + A + L V A + G GT+L+N D KQNI YL
Sbjct: 58 VIGGICFRQYKPQRFAEVAF---LAVTANEQVRGYGTRLMNKFKDHMQKQNIE--YLLTY 112
Query: 118 TNNEDAINFYKKFGF 132
+N AI ++KK GF
Sbjct: 113 ADNF-AIGYFKKQGF 126
>pdb|1M1D|A Chain A, Tetrahymena Gcn5 With Bound Bisubstrate Analog Inhibitor
pdb|1M1D|C Chain C, Tetrahymena Gcn5 With Bound Bisubstrate Analog Inhibitor
pdb|1PU9|A Chain A, Crystal Structure Of Tetrahymena Gcn5 With Bound Coenzyme
A And A 19-Residue Histone H3 Peptide
pdb|1PUA|A Chain A, Crystal Structure Of Tetrahymena Gcn5 With Bound Coenzyme
A And A Phosphorylated, 19-Residue Histone H3 Peptide
Length = 163
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 58 CVGAIACRLEKKEGGAICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQ 117
+G I R K + A + L V A + G GT+L+N D KQNI YL
Sbjct: 59 VIGGICFRQYKPQRFAEVAF---LAVTANEQVRGYGTRLMNKFKDHMQKQNIE--YLLTY 113
Query: 118 TNNEDAINFYKKFGF 132
+N AI ++KK GF
Sbjct: 114 ADNF-AIGYFKKQGF 127
>pdb|5GCN|A Chain A, Catalytic Domain Of Tetrahymena Gcn5 Histone
Acetyltransferase In Complex With Coenzyme A
Length = 166
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 58 CVGAIACRLEKKEGGAICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQ 117
+G I R K + A + L V A + G GT+L+N D KQNI YL
Sbjct: 62 VIGGICFRQYKPQRFAEVAF---LAVTANEQVRGYGTRLMNKFKDHMQKQNIE--YLLTY 116
Query: 118 TNNEDAINFYKKFGF 132
+N AI ++KK GF
Sbjct: 117 ADNF-AIGYFKKQGF 130
>pdb|3I9S|A Chain A, Structure From The Mobile Metagenome Of V.Cholerae.
Integron Cassette Protein Vch_cass6
pdb|3I9S|B Chain B, Structure From The Mobile Metagenome Of V.Cholerae.
Integron Cassette Protein Vch_cass6
pdb|3I9S|C Chain C, Structure From The Mobile Metagenome Of V.Cholerae.
Integron Cassette Protein Vch_cass6
pdb|3I9S|D Chain D, Structure From The Mobile Metagenome Of V.Cholerae.
Integron Cassette Protein Vch_cass6
Length = 183
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 77 YIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDITD 136
Y L V + RG GIG +L H+ + N + ++ N A FYK G +
Sbjct: 105 YXKDLFVSSSARGKGIGLQLXKHLATIAITHNCQRLDWTAESTNPTAGKFYKSIGASLIR 164
Query: 137 TIKNYY 142
K YY
Sbjct: 165 E-KEYY 169
>pdb|1Z4E|A Chain A, Crystal Structure Of Transcriptional Regulator From
Bacillus Halodurans C-125
pdb|1Z4E|B Chain B, Crystal Structure Of Transcriptional Regulator From
Bacillus Halodurans C-125
Length = 153
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 88 RGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF 132
RG GIG++L+ ++ ++ + L DA+ FY++ GF
Sbjct: 98 RGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGF 142
>pdb|3F8K|A Chain A, Crystal Structure Of Protein Acetyltransferase (Pat) From
Sulfolobus Solfataricus
Length = 160
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 79 MTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF 132
+L V YR LGIGT L+ +++ K +S V + N I +K GF
Sbjct: 77 FSLVVHRNYRTLGIGTLLVKTLIEEAKKSGLSTVKFYTLPENTPXIKIGRKLGF 130
>pdb|1Y9K|A Chain A, Iaa Acetyltransferase From Bacillus Cereus Atcc 14579
pdb|1Y9K|B Chain B, Iaa Acetyltransferase From Bacillus Cereus Atcc 14579
pdb|1Y9K|C Chain C, Iaa Acetyltransferase From Bacillus Cereus Atcc 14579
pdb|1Y9K|D Chain D, Iaa Acetyltransferase From Bacillus Cereus Atcc 14579
Length = 157
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 11/87 (12%)
Query: 68 KKEGGAICVYIM-----------TLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHV 116
K+ G I VY++ + V +G GIG KLL H ++ S++ +
Sbjct: 43 KQGGSVIGVYVLLETRPKTXEIXNIAVAEHLQGKGIGKKLLRHAVETAKGYGXSKLEVGT 102
Query: 117 QTNNEDAINFYKKFGFDITDTIKNYYT 143
++ + Y+K GF I +Y++
Sbjct: 103 GNSSVSQLALYQKCGFRIFSIDFDYFS 129
>pdb|2JLM|A Chain A, Structure Of A Putative Acetyltransferase (Aciad1637) From
Acinetobacter Baylyi Adp1
pdb|2JLM|B Chain B, Structure Of A Putative Acetyltransferase (Aciad1637) From
Acinetobacter Baylyi Adp1
pdb|2JLM|C Chain C, Structure Of A Putative Acetyltransferase (Aciad1637) From
Acinetobacter Baylyi Adp1
pdb|2JLM|D Chain D, Structure Of A Putative Acetyltransferase (Aciad1637) From
Acinetobacter Baylyi Adp1
pdb|2JLM|E Chain E, Structure Of A Putative Acetyltransferase (Aciad1637) From
Acinetobacter Baylyi Adp1
pdb|2JLM|F Chain F, Structure Of A Putative Acetyltransferase (Aciad1637) From
Acinetobacter Baylyi Adp1
Length = 182
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 87 YRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDITDTIKN 140
YRGLG+ L+N ++ + + + + N +I ++K GF + TI+
Sbjct: 102 YRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQ 155
>pdb|3K9U|A Chain A, Crystal Structure Of Paia Acetyltransferase (Ta0374) From
Thermoplasma Acidophilum
pdb|3K9U|B Chain B, Crystal Structure Of Paia Acetyltransferase (Ta0374) From
Thermoplasma Acidophilum
Length = 159
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 78 IMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDITDT 137
++ L + Y IG LL + K+ I E L+V N +FY K GF + DT
Sbjct: 89 LLRLYLKPEYTHKKIGKTLLLEAEKIMKKKGILECRLYVHRQNSVGFSFYYKNGFKVEDT 148
>pdb|3NE7|A Chain A, Crystal Structure Of Paia N-Acetyltransferase From
Thermoplasma Acidophilum In Complex With Coenzyme A
Length = 159
Score = 30.4 bits (67), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 78 IMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDITDT 137
++ L + Y IG LL + K+ I E L+V N +FY K GF + DT
Sbjct: 89 LLRLYLKPEYTHKKIGKTLLLEAEKIXKKKGILECRLYVHRQNSVGFSFYYKNGFKVEDT 148
>pdb|3F0A|A Chain A, Structure Of A Putative N-Acetyltransferase (Ta0374) In
Complex With Acetyl-Coa From Thermoplasma Acidophilum
Length = 162
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 78 IMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDITDT 137
++ L + Y IG LL + K+ I E L+V N +FY K GF + DT
Sbjct: 92 LLRLYLKPEYTHKKIGKTLLLEAEKIXKKKGILECRLYVHRQNSVGFSFYYKNGFKVEDT 151
>pdb|3FIX|A Chain A, Crystal Structure Of A Putative N-Acetyltransferase
(Ta0374) From Thermoplasma Acidophilum
pdb|3FIX|B Chain B, Crystal Structure Of A Putative N-Acetyltransferase
(Ta0374) From Thermoplasma Acidophilum
pdb|3FIX|C Chain C, Crystal Structure Of A Putative N-Acetyltransferase
(Ta0374) From Thermoplasma Acidophilum
pdb|3FIX|D Chain D, Crystal Structure Of A Putative N-Acetyltransferase
(Ta0374) From Thermoplasma Acidophilum
Length = 183
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 78 IMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDITDT 137
++ L + Y IG LL + K+ I E L+V N +FY K GF + DT
Sbjct: 113 LLRLYLKPEYTHKKIGKTLLLEAEKIXKKKGILECRLYVHRQNSVGFSFYYKNGFKVEDT 172
>pdb|3G8W|A Chain A, Crystal Structure Of A Probable Acetyltransferase From
Staphylococcus Epidermidis Atcc 12228
pdb|3G8W|B Chain B, Crystal Structure Of A Probable Acetyltransferase From
Staphylococcus Epidermidis Atcc 12228
pdb|3G8W|C Chain C, Crystal Structure Of A Probable Acetyltransferase From
Staphylococcus Epidermidis Atcc 12228
pdb|3G8W|D Chain D, Crystal Structure Of A Probable Acetyltransferase From
Staphylococcus Epidermidis Atcc 12228
Length = 169
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 92 IGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFD 133
+ +L+NH++ +QNI + + + +NN A F+ GF+
Sbjct: 98 VNRELINHIIQYAKEQNIETLXIAIASNNISAKVFFSSIGFE 139
>pdb|2OZG|A Chain A, Crystal Structure Of Gcn5-Related N-Acetyltransferase
(Yp_325469.1) From Anabaena Variabilis Atcc 29413 At
2.00 A Resolution
Length = 396
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 78 IMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFD 133
I +G+ YRG G L+ H L ++Q+I L+ T Y+K G++
Sbjct: 82 IAAVGIAPEYRGDGAAIALIQHTLQEISEQDIPISVLYPATQ-----RLYRKAGYE 132
>pdb|1Z4R|A Chain A, Human Gcn5 Acetyltransferase
Length = 168
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 16/132 (12%)
Query: 3 AGREVAISLDGVRDKNLMQLKKLNIALFPVRYNDKYYSDALASGEFTKLAYYSD-ICVGA 61
A R V + L G+++ QL ++ +Y + + + LA D +G
Sbjct: 18 ANRRVLLWLVGLQNVFSHQLPRMP---------KEYIARLVFDPKHKTLALIKDGRVIGG 68
Query: 62 IACRLEKKEGGAICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNE 121
I R+ +G V+ V + + G GT L+NH+ + K NI +Y + +E
Sbjct: 69 ICFRMFPTQGFTEIVFC---AVTSNEQVKGYGTHLMNHLKEYHIKHNI--LYF-LTYADE 122
Query: 122 DAINFYKKFGFD 133
AI ++KK GF
Sbjct: 123 YAIGYFKKQGFS 134
>pdb|4F6A|A Chain A, High-Resolution X-Ray Structure Of The Tetramutant Of
Bh1408 Protein From Bacillus Halodurans, Northeast
Structural Genomics Consortium (Nesg) Target Bhr182
pdb|4F6A|B Chain B, High-Resolution X-Ray Structure Of The Tetramutant Of
Bh1408 Protein From Bacillus Halodurans, Northeast
Structural Genomics Consortium (Nesg) Target Bhr182
Length = 156
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 23/56 (41%)
Query: 76 VYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFG 131
VYI L V RG GIG + ++ + + L V NE A FY G
Sbjct: 89 VYISDLCVDETRRGGGIGRLIFEAIISYGKAHQVDAIELDVYDFNERAKRFYHSLG 144
>pdb|1Y7R|A Chain A, 1.7 A Crystal Structure Of Protein Of Unknown Function
Sa2161 From Meticillin-Resistant Staphylococcus Aureus,
Probable Acetyltransferase
pdb|1Y7R|B Chain B, 1.7 A Crystal Structure Of Protein Of Unknown Function
Sa2161 From Meticillin-Resistant Staphylococcus Aureus,
Probable Acetyltransferase
Length = 133
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 72 GAICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFG 131
G I+ + VL Y+G G+ + H+ ++ VY+ + + A Y KFG
Sbjct: 60 GGTVFQIVDIAVLKSYQGQAYGSLIXEHIXKYIKNVSVESVYVSLIADYP-ADKLYVKFG 118
Query: 132 FDITD 136
F T+
Sbjct: 119 FXPTE 123
>pdb|2PPY|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
Length = 265
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 101 LDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDITD 136
L + + I+E++LH+ +N + FYK+F I D
Sbjct: 11 LTVFKEDGIAEIHLHINKSNSYDLEFYKEFNAAIDD 46
>pdb|1MK4|A Chain A, Structure Of Protein Of Unknown Function Yqjy From
Bacillus Subtilis, Probable Acetyltransferase
pdb|1MK4|B Chain B, Structure Of Protein Of Unknown Function Yqjy From
Bacillus Subtilis, Probable Acetyltransferase
Length = 157
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 77 YIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDI 134
YI GV +R + IG +L + ++ ++ + V N+ +I ++ K GFDI
Sbjct: 70 YIHFSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDI 127
>pdb|3KUQ|A Chain A, Crystal Structure Of The Dlc1 Rhogap Domain
Length = 228
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 96 LLNHVLD---LCAKQNISEVYLHVQTNNE---DAINFYKKFGFDITDTIKNYYTNITPP 148
L NH LD L K + ++ NE D +N+ + +D+ D +K Y+ ++ P
Sbjct: 47 LRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADMLKQYFRDLPEP 105
>pdb|3DR8|A Chain A, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium With Its Cofactor Acetyl-Coa
pdb|3DR8|B Chain B, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium With Its Cofactor Acetyl-Coa
pdb|3DR6|A Chain A, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium
pdb|3DR6|B Chain B, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium
pdb|3DR6|C Chain C, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium
Length = 174
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 83 VLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDIT 135
V ++G G+G KLL+ ++D + +++ N +I + GF +T
Sbjct: 90 VHPAHQGKGLGRKLLSRLIDEARRCGKHVXVAGIESQNAASIRLHHSLGFTVT 142
>pdb|1VHS|A Chain A, Crystal Structure Of A Putative Phosphinothricin N-
Acetyltransferase
pdb|1VHS|B Chain B, Crystal Structure Of A Putative Phosphinothricin N-
Acetyltransferase
Length = 175
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 88 RGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF 132
RG G+G+ LL L + I + + +N+ ++ ++K GF
Sbjct: 94 RGKGVGSYLLQEALRIAPNLGIRSLXAFIFGHNKPSLKLFEKHGF 138
>pdb|1YR0|A Chain A, Crystal Structure Of Phosphinothricin Acetyltransferase
From Agrobacterium Tumefaciens
pdb|1YR0|B Chain B, Crystal Structure Of Phosphinothricin Acetyltransferase
From Agrobacterium Tumefaciens
pdb|1YR0|C Chain C, Crystal Structure Of Phosphinothricin Acetyltransferase
From Agrobacterium Tumefaciens
pdb|1YR0|D Chain D, Crystal Structure Of Phosphinothricin Acetyltransferase
From Agrobacterium Tumefaciens
Length = 175
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 88 RGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDI 134
RG GIG +L ++D ++ + ++ N +I ++ GF +
Sbjct: 96 RGHGIGKRLXQALIDHAGGNDVHVLIAAIEAENTASIRLHESLGFRV 142
>pdb|3DSB|A Chain A, The Crystal Structure Of A Possible Acetyltransferase From
Clostridium Difficile 630
pdb|3DSB|B Chain B, The Crystal Structure Of A Possible Acetyltransferase From
Clostridium Difficile 630
Length = 157
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 76 VYIMTLGVLAPYRGLGIGTKLLNHVLDLCAK-QNISEVYLHVQTNNEDA 123
++I ++ V YR GI L N++ ++C K +NI L+V+ N +A
Sbjct: 85 LWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDENIVGXRLYVEKENINA 133
>pdb|1I21|A Chain A, Crystal Structure Of Yeast Gna1
pdb|1I21|B Chain B, Crystal Structure Of Yeast Gna1
pdb|1I21|M Chain M, Crystal Structure Of Yeast Gna1
pdb|1I21|N Chain N, Crystal Structure Of Yeast Gna1
pdb|1I21|X Chain X, Crystal Structure Of Yeast Gna1
pdb|1I21|Y Chain Y, Crystal Structure Of Yeast Gna1
Length = 159
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 73 AICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF 132
+C +I + V + Y+G G+G L++ ++ + ++ L N + FY+K GF
Sbjct: 92 GLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKN---VKFYEKCGF 148
>pdb|1I1D|A Chain A, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
pdb|1I1D|B Chain B, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
pdb|1I1D|C Chain C, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
pdb|1I1D|D Chain D, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
Length = 161
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 73 AICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF 132
+C +I + V + Y+G G+G L++ ++ + ++ L N + FY+K GF
Sbjct: 94 GLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKN---VKFYEKCGF 150
>pdb|1I12|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
pdb|1I12|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
pdb|1I12|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
pdb|1I12|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
Length = 160
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 73 AICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF 132
+C +I + V + Y+G G+G L++ ++ + ++ L N + FY+K GF
Sbjct: 93 GLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKN---VKFYEKCGF 149
>pdb|1BL0|A Chain A, Multiple Antibiotic Resistance Protein (Mara)DNA COMPLEX
Length = 129
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 107 QNISEVYLHVQTNNEDAINFYKKFGFD----ITDTIKNYYTNITPPDCYVLT 154
+ ++E+ ++ +NE + +++GF+ +T T KNY+ PP Y +T
Sbjct: 63 RKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFD--VPPHKYRMT 112
>pdb|1XS9|A Chain A, A Model Of The Ternary Complex Formed Between Mara, The
Alpha-Ctd Of Rna Polymerase And Dna
Length = 132
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 107 QNISEVYLHVQTNNEDAINFYKKFGFD----ITDTIKNYYTNITPPDCYVLT 154
+ ++E+ ++ +NE + +++GF+ +T T KNY+ PP Y +T
Sbjct: 66 RKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFD--VPPHKYRMT 115
>pdb|1CM0|B Chain B, Crystal Structure Of The PcafCOENZYME-A Complex
pdb|1CM0|A Chain A, Crystal Structure Of The PcafCOENZYME-A Complex
Length = 168
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 59 VGAIACRLEKKEGGAICVYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQT 118
+G I R+ +G V+ V + + G GT L+NH+ + K +I +
Sbjct: 65 IGGICFRMFPSQGFTEIVF---CAVTSNEQVKGYGTHLMNHLKEYHIKHDILNFLTYA-- 119
Query: 119 NNEDAINFYKKFGFD 133
+E AI ++KK GF
Sbjct: 120 -DEYAIGYFKKQGFS 133
>pdb|3JVN|A Chain A, Crystal Structure Of The Acetyltransferase Vf_1542 From
Vibrio Fischeri, Northeast Structural Genomics
Consortium Target Vfr136
Length = 166
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 78 IMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFD 133
I L + YR G+ +L + + E+++ V N+ A+ FY K G +
Sbjct: 91 IDELYIEKEYRREGVAEQLXXRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQGLN 146
>pdb|4E0A|A Chain A, Crystal Structure Of The Mutant F44r Bh1408 Protein From
Bacillus Halodurans, Northeast Structural Genomics
Consortium (Nesg) Target Bhr182
pdb|4E0A|B Chain B, Crystal Structure Of The Mutant F44r Bh1408 Protein From
Bacillus Halodurans, Northeast Structural Genomics
Consortium (Nesg) Target Bhr182
Length = 164
Score = 26.9 bits (58), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 76 VYIMTLGVLAPYRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFG 131
VYI L V RG GIG + ++ + + L V N+ A FY G
Sbjct: 89 VYISDLCVDETRRGGGIGRLIFEAIISYGKAHQVDAIELDVYDFNDRAKAFYHSLG 144
>pdb|2FL4|A Chain A, The Crystal Structure Of The SpermineSPERMIDINE
ACETYLTRANSFERASE From Enterococcus Faecalis
Length = 149
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 76 VYIMTLGVLAPYRGLGIGT---KLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGF 132
V++ + ++G G G +LL +L L K +++YL V N AI Y++ GF
Sbjct: 71 VWLDRFLIDQRFQGQGYGKAACRLL--MLKLIEKYQTNKLYLSVYDTNSSAIRLYQQLGF 128
>pdb|3TZT|A Chain A, The Structure Of A Protein In Glycosyl Transferase
Family 8 From Anaerococcus Prevotii.
pdb|3TZT|B Chain B, The Structure Of A Protein In Glycosyl Transferase
Family 8 From Anaerococcus Prevotii
Length = 276
Score = 26.6 bits (57), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 9 ISLDGVRDKNLMQLKKLNIALFPVRYNDKYYSDALASGEFTKLAYY 54
IS D ++D LKK + L+P+R D +S A + + K YY
Sbjct: 45 ISEDKLKDLG-EDLKKFSYTLYPIRATDDLFSFAKVTDRYPKEXYY 89
>pdb|3N7Z|A Chain A, Crystal Structure Of Acetyltransferase From Bacillus
Anthrac
pdb|3N7Z|B Chain B, Crystal Structure Of Acetyltransferase From Bacillus
Anthrac
pdb|3N7Z|C Chain C, Crystal Structure Of Acetyltransferase From Bacillus
Anthrac
pdb|3N7Z|D Chain D, Crystal Structure Of Acetyltransferase From Bacillus
Anthrac
pdb|3N7Z|E Chain E, Crystal Structure Of Acetyltransferase From Bacillus
Anthrac
pdb|3N7Z|F Chain F, Crystal Structure Of Acetyltransferase From Bacillus
Anthrac
Length = 388
Score = 26.2 bits (56), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 87 YRGLGIGTKLLNHVLDLCAKQNISEVYLHVQTNNEDAINFYKKFGFDI 134
YR G +LL H L K + LH A++FY+K+G+++
Sbjct: 88 YRRSGYVKELLQHSLQTXKKDGYTVSXLH-----PFAVSFYRKYGWEL 130
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,939,492
Number of Sequences: 62578
Number of extensions: 195130
Number of successful extensions: 621
Number of sequences better than 100.0: 87
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 554
Number of HSP's gapped (non-prelim): 87
length of query: 164
length of database: 14,973,337
effective HSP length: 91
effective length of query: 73
effective length of database: 9,278,739
effective search space: 677347947
effective search space used: 677347947
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)