BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038812
(84 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M0E0|R15A5_ARATH 40S ribosomal protein S15a-5 OS=Arabidopsis thaliana GN=RPS15AE
PE=2 SV=1
Length = 129
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 43 MGRRILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
MGRRILNDALR IVNAERRGKA+VEL+PISTVMSSFL IMK
Sbjct: 1 MGRRILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMK 41
>sp|O82205|R15A2_ARATH 40S ribosomal protein S15a-2 OS=Arabidopsis thaliana GN=RPS15AB
PE=2 SV=1
Length = 129
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 39/41 (95%)
Query: 43 MGRRILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
MGRRILNDALR IVNAE+RGKA+VEL+P+STVMSSFL IMK
Sbjct: 1 MGRRILNDALRTIVNAEKRGKASVELKPVSTVMSSFLKIMK 41
>sp|P46793|RS15A_DICDI 40S ribosomal protein S15a OS=Dictyostelium discoideum GN=rps15a
PE=2 SV=3
Length = 130
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIM 82
+LND L +IVNAER+GK V ++P S V+ FL +M
Sbjct: 6 VLNDCLNSIVNAERQGKRQVLVRPSSKVIVKFLEVM 41
>sp|Q9AT34|RS15A_DAUCA 40S ribosomal protein S15a OS=Daucus carota GN=RPS15A PE=2 SV=3
Length = 130
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+LNDAL+++ NAE+RGK V ++P S V+ FL +M+
Sbjct: 6 VLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQ 42
>sp|Q00332|RS15A_BRANA 40S ribosomal protein S15a OS=Brassica napus GN=RPS15A PE=2 SV=3
Length = 130
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+LNDAL+++ NAE+RGK V ++P S V+ FL +M+
Sbjct: 6 VLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQ 42
>sp|P42798|R15A1_ARATH 40S ribosomal protein S15a-1 OS=Arabidopsis thaliana GN=RPS15AA
PE=2 SV=2
Length = 130
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+LNDAL+++ NAE+RGK V ++P S V+ FL +M+
Sbjct: 6 VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQ 42
>sp|Q90YQ8|RS15A_ICTPU 40S ribosomal protein S15a OS=Ictalurus punctatus GN=rps15a PE=2
SV=3
Length = 130
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIM 82
+L DAL+ I NAE+RGKA V ++P S V+ FL +M
Sbjct: 6 VLADALKCINNAEKRGKAQVLIRPCSKVIVRFLTVM 41
>sp|P46792|RS22_AGABI 40S ribosomal protein S22 OS=Agaricus bisporus GN=rps22 PE=2 SV=1
Length = 130
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+LND L++I NA RRGK V ++P S V+ FL++M+
Sbjct: 6 VLNDCLKSICNASRRGKRQVIVRPSSKVVVKFLSVMQ 42
>sp|Q7KR04|RS15B_DROME 40S ribosomal protein S15Ab OS=Drosophila melanogaster GN=RpS15Ab
PE=2 SV=3
Length = 130
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIM 82
+L DAL+ I NAE+RGK V L+P S V+ FL +M
Sbjct: 6 VLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVM 41
>sp|Q6XIM8|RS15A_DROYA 40S ribosomal protein S15a OS=Drosophila yakuba GN=RpS15Aa PE=2
SV=3
Length = 130
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIM 82
+L DAL+ I NAE+RGK V L+P S V+ FL +M
Sbjct: 6 VLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVM 41
>sp|P48149|RS15A_DROME 40S ribosomal protein S15Aa OS=Drosophila melanogaster GN=RpS15Aa
PE=2 SV=2
Length = 130
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIM 82
+L DAL+ I NAE+RGK V L+P S V+ FL +M
Sbjct: 6 VLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVM 41
>sp|Q9LX88|R15A4_ARATH 40S ribosomal protein S15a-4 OS=Arabidopsis thaliana GN=RPS15AD
PE=2 SV=3
Length = 130
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+LND L+++ NAE+RGK V ++P S V+ FL +M+
Sbjct: 6 VLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQ 42
>sp|O80646|R15A3_ARATH 40S ribosomal protein S15a-3 OS=Arabidopsis thaliana GN=RPS15AC
PE=2 SV=2
Length = 130
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+LND L+++ NAE++GK V ++P S V+ FL +M+
Sbjct: 6 VLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQ 42
>sp|Q5R938|RS15A_PONAB 40S ribosomal protein S15a OS=Pongo abelii GN=RPS15A PE=2 SV=1
Length = 130
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIM 82
+L DAL++I NAE+RGK V ++P S V+ FL +M
Sbjct: 6 VLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVM 41
>sp|P62246|RS15A_RAT 40S ribosomal protein S15a OS=Rattus norvegicus GN=Rps15a PE=1
SV=2
Length = 130
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIM 82
+L DAL++I NAE+RGK V ++P S V+ FL +M
Sbjct: 6 VLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVM 41
>sp|P62245|RS15A_MOUSE 40S ribosomal protein S15a OS=Mus musculus GN=Rps15a PE=2 SV=2
Length = 130
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIM 82
+L DAL++I NAE+RGK V ++P S V+ FL +M
Sbjct: 6 VLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVM 41
>sp|P62244|RS15A_HUMAN 40S ribosomal protein S15a OS=Homo sapiens GN=RPS15A PE=1 SV=2
Length = 130
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIM 82
+L DAL++I NAE+RGK V ++P S V+ FL +M
Sbjct: 6 VLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVM 41
>sp|Q76I82|RS15A_BOVIN 40S ribosomal protein S15a OS=Bos taurus GN=RPS15A PE=2 SV=1
Length = 130
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIM 82
+L DAL++I NAE+RGK V ++P S V+ FL +M
Sbjct: 6 VLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVM 41
>sp|O14469|RS22_SCHPO 40S ribosomal protein S22 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps22a PE=2 SV=1
Length = 130
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+L D L IVNAERRG+ V ++P S V+ FL +M+
Sbjct: 6 VLADCLNNIVNAERRGRRQVLIRPSSKVIVKFLTVMQ 42
>sp|P33095|RS15A_STRPU 40S ribosomal protein S15a OS=Strongylocentrotus purpuratus
GN=RPS15A PE=2 SV=3
Length = 130
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIM 82
+L DALR+I NAE+R K V ++P S V FL +M
Sbjct: 6 VLADALRSICNAEKRCKRQVLIRPCSKVTVKFLMVM 41
>sp|Q3E7Y3|RS22B_YEAST 40S ribosomal protein S22-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS22B PE=1 SV=3
Length = 130
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+L DAL AI NAE+ GK V L+P S V+ FL +M+
Sbjct: 6 VLADALNAINNAEKTGKRQVLLRPSSKVIIKFLQVMQ 42
>sp|Q7RV75|RS22_NEUCR 40S ribosomal protein S22 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rps-22 PE=3 SV=1
Length = 130
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+L+DAL +I NAE+ GK V ++P S V+ FL +M+
Sbjct: 6 VLHDALNSINNAEKAGKRQVLIRPSSKVIIKFLQVMQ 42
>sp|Q6CW21|RS22_KLULA 40S ribosomal protein S22 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=RPS22 PE=3 SV=3
Length = 130
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+L DAL AI NAE+ GK V ++P S V+ FL +M+
Sbjct: 6 VLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQ 42
>sp|Q752J5|RS22_ASHGO 40S ribosomal protein S22 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPS22A PE=3
SV=3
Length = 130
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+L DAL AI NAE+ GK V ++P S V+ FL +M+
Sbjct: 6 VLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQ 42
>sp|P33953|RS22_KLUMA 40S ribosomal protein S22 OS=Kluyveromyces marxianus GN=RPS22
PE=3 SV=3
Length = 130
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+L DAL AI NAE+ GK V ++P S V+ FL +M+
Sbjct: 6 VLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQ 42
>sp|P0C0W1|RS22A_YEAST 40S ribosomal protein S22-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS22A PE=1 SV=2
Length = 130
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+L DAL AI NAE+ GK V ++P S V+ FL +M+
Sbjct: 6 VLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQ 42
>sp|Q6FMW9|RS22_CANGA 40S ribosomal protein S22 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPS22
PE=3 SV=3
Length = 130
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+L DAL AI NAE+ GK V ++P S V+ FL +M+
Sbjct: 6 VLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQ 42
>sp|Q96W54|RS22_CANAL 40S ribosomal protein S22 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=RPS22A PE=3 SV=3
Length = 130
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 47 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
+L DAL AI NAE+ GK V ++P S V+ FL +M+
Sbjct: 6 VLADALNAINNAEKTGKRQVLIRPSSKVIIKFLTVMQ 42
>sp|P50891|RS15A_PARLI 40S ribosomal protein S15a OS=Paracentrotus lividus GN=RPS15A
PE=2 SV=2
Length = 130
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 51 ALRAIVNAERRGKATVELQPISTVMSSFLNIM 82
ALR I NAE+R K V ++P S V FL +M
Sbjct: 10 ALRCICNAEKRCKRQVLIRPCSKVTIKFLMVM 41
>sp|Q6L1B2|RS8_PICTO 30S ribosomal protein S8 OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rps8
PE=3 SV=1
Length = 129
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 48 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMK 83
LND + I NA R GK+ V + P S ++ L +M+
Sbjct: 6 LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQ 41
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.124 0.330
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,152,591
Number of Sequences: 539616
Number of extensions: 854861
Number of successful extensions: 18374
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 15880
Number of HSP's gapped (non-prelim): 1596
length of query: 84
length of database: 191,569,459
effective HSP length: 55
effective length of query: 29
effective length of database: 161,890,579
effective search space: 4694826791
effective search space used: 4694826791
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)