Query 038815
Match_columns 1436
No_of_seqs 781 out of 6630
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 03:36:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038815.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038815hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 8E-258 2E-262 2378.5 97.7 1307 36-1436 12-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 1E-235 3E-240 2339.7 134.8 1401 14-1436 15-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 6E-187 1E-191 1879.6 130.0 1258 94-1432 2-1390(1394)
4 KOG0061 Transporter, ABC super 100.0 3.2E-93 7E-98 893.4 56.0 554 863-1435 22-611 (613)
5 TIGR00955 3a01204 The Eye Pigm 100.0 2.2E-91 4.8E-96 888.0 57.6 542 891-1436 37-617 (617)
6 PLN03211 ABC transporter G-25; 100.0 8E-91 1.7E-95 881.0 59.6 557 864-1433 37-659 (659)
7 TIGR00956 3a01205 Pleiotropic 100.0 2.9E-88 6.3E-93 917.5 60.4 569 860-1433 23-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 7.5E-87 1.6E-91 898.6 56.8 570 861-1432 126-789 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 8.4E-82 1.8E-86 791.9 38.7 541 890-1434 126-732 (1391)
10 TIGR00955 3a01204 The Eye Pigm 100.0 1.7E-79 3.6E-84 779.3 57.4 564 175-782 35-612 (617)
11 PLN03211 ABC transporter G-25; 100.0 9.5E-79 2.1E-83 770.8 61.8 604 115-783 35-658 (659)
12 KOG0061 Transporter, ABC super 100.0 1.6E-78 3.6E-83 760.6 55.2 557 177-783 42-608 (613)
13 TIGR01257 rim_protein retinal- 100.0 3.3E-64 7.2E-69 677.4 70.5 202 865-1088 1936-2139(2272)
14 KOG0055 Multidrug/pheromone ex 100.0 3.7E-65 8E-70 644.4 52.1 755 176-1080 364-1187(1228)
15 COG1123 ATPase components of v 100.0 9E-59 1.9E-63 552.9 46.0 207 178-421 22-243 (539)
16 PTZ00265 multidrug resistance 100.0 3.5E-58 7.5E-63 624.2 49.2 202 865-1089 1164-1428(1466)
17 PRK13549 xylose transporter AT 100.0 2.4E-58 5.3E-63 575.7 43.9 447 169-1088 9-474 (506)
18 PRK09700 D-allose transporter 100.0 2.6E-58 5.5E-63 576.5 42.7 214 169-419 9-231 (510)
19 PRK10762 D-ribose transporter 100.0 3.5E-58 7.6E-63 573.6 43.8 209 169-417 8-225 (501)
20 KOG0054 Multidrug resistance-a 100.0 1.7E-58 3.8E-63 598.3 42.4 211 865-1104 1137-1359(1381)
21 PLN03130 ABC transporter C fam 100.0 1.5E-56 3.2E-61 613.9 57.4 196 865-1088 1236-1441(1622)
22 PRK15439 autoinducer 2 ABC tra 100.0 2.2E-57 4.7E-62 566.8 44.1 203 169-419 15-226 (510)
23 TIGR03269 met_CoM_red_A2 methy 100.0 3.1E-57 6.7E-62 568.0 45.7 185 892-1088 297-497 (520)
24 TIGR02633 xylG D-xylose ABC tr 100.0 1.9E-57 4.1E-62 567.6 42.4 190 892-1088 273-472 (500)
25 PRK10261 glutathione transport 100.0 4.2E-57 9.1E-62 575.0 45.9 211 866-1088 313-533 (623)
26 PLN03232 ABC transporter C fam 100.0 7.4E-57 1.6E-61 617.5 51.5 195 866-1088 1234-1438(1495)
27 PRK15134 microcin C ABC transp 100.0 7.4E-57 1.6E-61 565.4 45.5 187 892-1088 299-495 (529)
28 PRK11288 araG L-arabinose tran 100.0 4.8E-57 1E-61 563.4 42.3 187 894-1088 268-465 (501)
29 TIGR00957 MRP_assoc_pro multi 100.0 4.3E-55 9.3E-60 601.0 57.0 196 865-1088 1283-1488(1522)
30 PRK10982 galactose/methyl gala 100.0 6.1E-56 1.3E-60 552.5 43.7 203 174-418 7-219 (491)
31 PTZ00243 ABC transporter; Prov 100.0 2E-54 4.4E-59 592.3 55.9 197 865-1089 1307-1514(1560)
32 PRK10938 putative molybdenum t 100.0 3.6E-55 7.8E-60 545.8 38.4 194 866-1079 260-463 (490)
33 TIGR01271 CFTR_protein cystic 100.0 1E-53 2.2E-58 585.5 54.6 209 865-1104 1216-1437(1490)
34 PRK15064 ABC transporter ATP-b 100.0 1.5E-52 3.2E-57 526.6 44.0 183 866-1088 319-504 (530)
35 PRK11819 putative ABC transpor 100.0 3.4E-52 7.3E-57 525.0 45.6 186 866-1088 324-511 (556)
36 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2.4E-51 5.1E-56 517.3 48.3 186 866-1088 322-509 (552)
37 COG4172 ABC-type uncharacteriz 100.0 6.7E-51 1.5E-55 454.7 39.2 450 176-1088 21-496 (534)
38 PRK13409 putative ATPase RIL; 100.0 9.9E-51 2.1E-55 509.2 35.9 183 866-1088 340-523 (590)
39 PRK10636 putative ABC transpor 100.0 1.4E-49 3.1E-54 506.2 44.6 182 866-1088 312-496 (638)
40 PRK11147 ABC transporter ATPas 100.0 1.5E-49 3.2E-54 507.5 43.2 186 866-1088 319-506 (635)
41 COG1129 MglA ABC-type sugar tr 100.0 8.8E-49 1.9E-53 464.8 39.9 440 168-1088 11-470 (500)
42 COG0488 Uup ATPase components 100.0 4.8E-48 1E-52 471.8 37.2 215 170-414 8-231 (530)
43 PLN03073 ABC transporter F fam 100.0 1E-47 2.2E-52 489.8 38.0 185 866-1088 508-693 (718)
44 COG3845 ABC-type uncharacteriz 100.0 3.1E-45 6.7E-50 424.2 37.0 445 168-1088 7-472 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 1E-41 2.2E-46 357.0 19.4 225 168-443 5-238 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 2.3E-39 5.1E-44 339.3 19.1 181 890-1079 13-197 (240)
47 COG3839 MalK ABC-type sugar tr 100.0 9.8E-39 2.1E-43 366.0 20.4 223 169-442 7-235 (338)
48 COG1118 CysA ABC-type sulfate/ 100.0 1.3E-38 2.7E-43 348.7 19.0 224 171-443 8-240 (345)
49 COG1135 AbcC ABC-type metal io 100.0 1.6E-38 3.4E-43 349.1 19.7 219 176-445 17-246 (339)
50 COG3842 PotA ABC-type spermidi 100.0 1.5E-38 3.3E-43 366.4 20.3 227 168-444 8-240 (352)
51 COG1125 OpuBA ABC-type proline 100.0 1.8E-38 3.9E-43 338.1 19.2 214 168-422 4-225 (309)
52 COG1131 CcmA ABC-type multidru 100.0 5.9E-38 1.3E-42 362.5 22.4 215 169-426 8-230 (293)
53 COG1136 SalX ABC-type antimicr 100.0 1.4E-37 2.9E-42 337.6 21.6 186 892-1089 18-212 (226)
54 KOG0927 Predicted transporter 100.0 4.2E-37 9.2E-42 356.7 27.1 178 864-1078 387-566 (614)
55 COG1131 CcmA ABC-type multidru 100.0 9.7E-38 2.1E-42 360.7 21.4 187 891-1088 17-206 (293)
56 COG1116 TauB ABC-type nitrate/ 100.0 9.8E-38 2.1E-42 338.0 19.9 197 866-1088 3-200 (248)
57 COG1127 Ttg2A ABC-type transpo 100.0 1.4E-37 3.1E-42 330.8 19.9 215 167-422 10-235 (263)
58 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.9E-37 4.1E-42 340.9 21.0 200 866-1088 4-208 (254)
59 COG1120 FepC ABC-type cobalami 100.0 8.4E-38 1.8E-42 345.7 17.4 214 169-421 6-227 (258)
60 COG1116 TauB ABC-type nitrate/ 100.0 2.5E-37 5.4E-42 334.8 20.0 197 170-411 8-211 (248)
61 TIGR01257 rim_protein retinal- 100.0 1.3E-32 2.8E-37 372.8 66.1 201 865-1088 927-1129(2272)
62 COG1135 AbcC ABC-type metal io 100.0 5.3E-37 1.2E-41 337.1 18.5 186 891-1088 18-211 (339)
63 COG2884 FtsE Predicted ATPase 100.0 5.1E-37 1.1E-41 314.2 16.7 198 867-1088 2-205 (223)
64 COG1117 PstB ABC-type phosphat 100.0 5.9E-37 1.3E-41 319.2 15.9 224 171-442 13-249 (253)
65 COG1120 FepC ABC-type cobalami 100.0 1.2E-36 2.6E-41 336.6 17.5 202 866-1088 2-208 (258)
66 COG1127 Ttg2A ABC-type transpo 100.0 2.1E-36 4.6E-41 321.9 17.9 200 866-1088 8-215 (263)
67 COG4555 NatA ABC-type Na+ tran 100.0 1.6E-36 3.5E-41 312.8 15.9 208 171-422 7-222 (245)
68 COG3638 ABC-type phosphate/pho 100.0 4.4E-36 9.6E-41 318.6 18.9 219 169-422 7-237 (258)
69 COG1117 PstB ABC-type phosphat 100.0 3.7E-36 7.9E-41 313.3 17.8 194 866-1079 7-209 (253)
70 COG1136 SalX ABC-type antimicr 100.0 8.6E-36 1.9E-40 323.5 20.6 192 177-411 17-220 (226)
71 COG1125 OpuBA ABC-type proline 100.0 2.6E-36 5.6E-41 321.6 15.8 187 891-1088 13-205 (309)
72 COG1118 CysA ABC-type sulfate/ 100.0 3.9E-36 8.5E-41 329.2 17.1 190 890-1088 13-207 (345)
73 COG3839 MalK ABC-type sugar tr 100.0 9.1E-36 2E-40 341.7 19.9 184 894-1088 18-203 (338)
74 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.6E-35 3.4E-40 325.8 20.6 212 169-421 8-226 (254)
75 PRK11432 fbpC ferric transport 100.0 2.5E-35 5.3E-40 348.4 23.4 210 169-421 10-225 (351)
76 TIGR03265 PhnT2 putative 2-ami 100.0 2.8E-35 6E-40 348.7 23.4 210 169-421 8-223 (353)
77 PRK11650 ugpC glycerol-3-phosp 100.0 2.8E-35 6.1E-40 349.0 23.4 209 170-421 8-223 (356)
78 COG3842 PotA ABC-type spermidi 100.0 2.1E-35 4.6E-40 340.4 20.3 200 866-1088 5-206 (352)
79 TIGR03258 PhnT 2-aminoethylpho 100.0 4.1E-35 8.9E-40 347.6 23.3 210 170-421 10-227 (362)
80 PRK09452 potA putrescine/sperm 100.0 7.2E-35 1.6E-39 346.6 23.4 223 168-441 17-245 (375)
81 PRK13537 nodulation ABC transp 100.0 7.6E-35 1.6E-39 339.9 22.5 211 168-422 10-227 (306)
82 COG3638 ABC-type phosphate/pho 100.0 2.9E-35 6.2E-40 312.5 17.0 205 866-1090 3-219 (258)
83 TIGR02314 ABC_MetN D-methionin 100.0 1.3E-34 2.7E-39 340.6 24.0 201 178-421 18-229 (343)
84 COG2884 FtsE Predicted ATPase 100.0 7.3E-35 1.6E-39 298.4 18.0 201 171-415 7-219 (223)
85 COG1124 DppF ABC-type dipeptid 100.0 8.2E-35 1.8E-39 311.8 19.0 200 179-422 21-231 (252)
86 TIGR01186 proV glycine betaine 100.0 2.1E-34 4.5E-39 340.4 24.1 203 176-421 4-218 (363)
87 PRK10851 sulfate/thiosulfate t 100.0 2E-34 4.3E-39 341.4 23.6 213 170-421 7-225 (353)
88 PRK13537 nodulation ABC transp 100.0 2.1E-34 4.5E-39 336.2 22.9 200 865-1088 6-207 (306)
89 COG3840 ThiQ ABC-type thiamine 100.0 1.1E-34 2.4E-39 294.3 17.6 196 183-421 17-218 (231)
90 TIGR00960 3a0501s02 Type II (G 100.0 2.5E-34 5.3E-39 320.4 21.9 200 867-1088 2-207 (216)
91 cd03261 ABC_Org_Solvent_Resist 100.0 3E-34 6.6E-39 323.8 22.9 206 173-420 8-224 (235)
92 cd03261 ABC_Org_Solvent_Resist 100.0 2.8E-34 6E-39 324.1 22.1 187 892-1088 13-206 (235)
93 PRK11607 potG putrescine trans 100.0 3.2E-34 6.8E-39 341.8 23.5 210 169-421 23-238 (377)
94 COG4559 ABC-type hemin transpo 100.0 1.2E-34 2.5E-39 301.3 16.4 209 171-421 7-229 (259)
95 PRK11000 maltose/maltodextrin 100.0 4.5E-34 9.7E-39 341.0 23.6 209 170-421 8-222 (369)
96 PRK11650 ugpC glycerol-3-phosp 100.0 3.9E-34 8.5E-39 339.2 22.9 199 867-1088 4-204 (356)
97 TIGR01188 drrA daunorubicin re 100.0 4.4E-34 9.5E-39 333.8 22.6 203 176-422 4-213 (302)
98 TIGR03265 PhnT2 putative 2-ami 100.0 5.3E-34 1.1E-38 337.8 22.8 199 866-1088 4-204 (353)
99 TIGR02314 ABC_MetN D-methionin 100.0 6.5E-34 1.4E-38 334.6 23.1 202 867-1088 2-210 (343)
100 PRK11432 fbpC ferric transport 100.0 6.5E-34 1.4E-38 336.4 23.2 199 866-1088 6-206 (351)
101 PRK13536 nodulation factor exp 100.0 7.2E-34 1.6E-38 335.0 23.4 211 168-422 44-261 (340)
102 COG0411 LivG ABC-type branched 100.0 2.1E-34 4.5E-39 309.1 16.8 223 168-421 7-238 (250)
103 COG1122 CbiO ABC-type cobalt t 100.0 3.6E-34 7.9E-39 317.4 19.2 202 178-422 17-228 (235)
104 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 7.5E-34 1.6E-38 317.0 21.8 185 892-1088 17-209 (218)
105 cd03259 ABC_Carb_Solutes_like 100.0 8.3E-34 1.8E-38 315.4 21.5 186 892-1088 13-200 (213)
106 cd03234 ABCG_White The White s 100.0 1.3E-33 2.8E-38 316.7 22.5 208 867-1088 4-213 (226)
107 TIGR03258 PhnT 2-aminoethylpho 100.0 1E-33 2.2E-38 335.7 22.7 199 866-1088 5-208 (362)
108 cd03269 ABC_putative_ATPase Th 100.0 1.1E-33 2.4E-38 313.7 21.4 185 892-1088 13-197 (210)
109 COG4555 NatA ABC-type Na+ tran 100.0 1.2E-34 2.6E-39 299.0 12.4 186 893-1089 16-203 (245)
110 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.6E-33 3.5E-38 314.6 22.7 184 892-1088 17-201 (220)
111 cd03265 ABC_DrrA DrrA is the A 100.0 1.4E-33 3.1E-38 315.1 21.8 207 171-420 6-219 (220)
112 cd03259 ABC_Carb_Solutes_like 100.0 1.5E-33 3.2E-38 313.4 21.6 200 173-415 8-213 (213)
113 TIGR01188 drrA daunorubicin re 100.0 8.5E-34 1.8E-38 331.4 20.5 187 891-1088 5-193 (302)
114 TIGR02673 FtsE cell division A 100.0 1.6E-33 3.5E-38 313.4 21.6 199 867-1088 2-206 (214)
115 PRK11153 metN DL-methionine tr 100.0 2E-33 4.4E-38 332.8 23.6 202 177-421 17-229 (343)
116 TIGR01288 nodI ATP-binding ABC 100.0 2E-33 4.3E-38 328.4 22.8 210 169-422 8-224 (303)
117 cd03301 ABC_MalK_N The N-termi 100.0 2.3E-33 5E-38 311.9 21.9 186 892-1088 13-200 (213)
118 PRK09452 potA putrescine/sperm 100.0 2.2E-33 4.7E-38 334.0 23.1 199 866-1088 14-214 (375)
119 cd03219 ABC_Mj1267_LivG_branch 100.0 2.2E-33 4.8E-38 317.0 22.0 189 892-1088 13-212 (236)
120 COG1137 YhbG ABC-type (unclass 100.0 2E-34 4.3E-39 297.0 12.1 210 170-421 9-227 (243)
121 cd03292 ABC_FtsE_transporter F 100.0 2.4E-33 5.3E-38 311.9 21.8 186 892-1088 14-205 (214)
122 cd03265 ABC_DrrA DrrA is the A 100.0 2.4E-33 5.1E-38 313.3 21.7 186 892-1088 13-201 (220)
123 cd03266 ABC_NatA_sodium_export 100.0 2E-33 4.3E-38 313.5 20.7 202 867-1088 2-205 (218)
124 COG0410 LivF ABC-type branched 100.0 1.8E-33 3.8E-38 299.7 19.2 209 169-421 7-225 (237)
125 cd03296 ABC_CysA_sulfate_impor 100.0 3.3E-33 7.2E-38 316.1 22.7 211 171-420 8-224 (239)
126 PRK13536 nodulation factor exp 100.0 2.8E-33 6.1E-38 329.9 22.9 199 866-1088 41-241 (340)
127 PRK10851 sulfate/thiosulfate t 100.0 2.7E-33 6E-38 331.6 22.8 201 867-1088 3-206 (353)
128 cd03218 ABC_YhbG The ABC trans 100.0 2.8E-33 6.1E-38 315.4 21.8 186 892-1088 13-202 (232)
129 TIGR01288 nodI ATP-binding ABC 100.0 2.6E-33 5.7E-38 327.4 22.2 199 866-1088 4-204 (303)
130 cd03219 ABC_Mj1267_LivG_branch 100.0 3.4E-33 7.3E-38 315.6 22.3 213 174-420 9-230 (236)
131 cd03294 ABC_Pro_Gly_Bertaine T 100.0 4.3E-33 9.4E-38 320.2 23.5 209 170-421 29-249 (269)
132 cd03218 ABC_YhbG The ABC trans 100.0 3.9E-33 8.4E-38 314.3 22.4 206 171-420 6-220 (232)
133 cd03258 ABC_MetN_methionine_tr 100.0 4.7E-33 1E-37 313.8 22.9 199 179-420 19-228 (233)
134 PRK13637 cbiO cobalt transport 100.0 5.7E-33 1.2E-37 321.8 23.9 213 178-433 20-248 (287)
135 PRK11000 maltose/maltodextrin 100.0 3.6E-33 7.8E-38 333.3 22.8 199 866-1088 3-203 (369)
136 cd03226 ABC_cobalt_CbiO_domain 100.0 1.9E-33 4.1E-38 310.6 18.9 182 892-1088 13-195 (205)
137 cd03301 ABC_MalK_N The N-termi 100.0 4.6E-33 1E-37 309.5 22.1 199 174-415 9-213 (213)
138 PRK11629 lolD lipoprotein tran 100.0 5.3E-33 1.2E-37 313.2 22.6 202 866-1088 5-214 (233)
139 TIGR03522 GldA_ABC_ATP gliding 100.0 4E-33 8.8E-38 325.3 22.3 208 170-422 7-221 (301)
140 cd03296 ABC_CysA_sulfate_impor 100.0 6.8E-33 1.5E-37 313.6 23.5 201 867-1088 3-206 (239)
141 PRK11607 potG putrescine trans 100.0 5.4E-33 1.2E-37 331.3 23.8 199 866-1088 19-219 (377)
142 cd03260 ABC_PstB_phosphate_tra 100.0 2.9E-33 6.3E-38 314.2 20.0 204 173-419 8-226 (227)
143 PRK11153 metN DL-methionine tr 100.0 4.7E-33 1E-37 329.7 22.8 202 867-1088 2-210 (343)
144 TIGR01186 proV glycine betaine 100.0 3.8E-33 8.3E-38 329.7 21.6 188 890-1088 4-199 (363)
145 cd03262 ABC_HisP_GlnQ_permease 100.0 4.5E-33 9.8E-38 309.6 21.0 187 892-1088 13-204 (213)
146 cd03268 ABC_BcrA_bacitracin_re 100.0 3.8E-33 8.2E-38 309.0 19.9 182 892-1088 13-195 (208)
147 cd03293 ABC_NrtD_SsuB_transpor 100.0 7.4E-33 1.6E-37 309.3 22.4 195 178-417 17-218 (220)
148 cd03269 ABC_putative_ATPase Th 100.0 5.1E-33 1.1E-37 308.4 20.6 197 174-415 9-210 (210)
149 cd03260 ABC_PstB_phosphate_tra 100.0 4.4E-33 9.5E-38 312.7 20.3 189 892-1088 13-209 (227)
150 cd03258 ABC_MetN_methionine_tr 100.0 5.2E-33 1.1E-37 313.4 20.9 185 893-1088 19-210 (233)
151 cd03224 ABC_TM1139_LivF_branch 100.0 6.8E-33 1.5E-37 310.1 21.5 202 173-420 8-219 (222)
152 TIGR01166 cbiO cobalt transpor 100.0 5.8E-33 1.3E-37 303.0 20.3 178 892-1079 5-188 (190)
153 cd03263 ABC_subfamily_A The AB 100.0 6.3E-33 1.4E-37 310.0 21.0 198 178-420 15-219 (220)
154 cd03225 ABC_cobalt_CbiO_domain 100.0 4.8E-33 1E-37 308.8 19.8 186 892-1088 14-203 (211)
155 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.1E-32 2.3E-37 312.5 22.9 201 178-421 14-224 (242)
156 TIGR02211 LolD_lipo_ex lipopro 100.0 9.3E-33 2E-37 308.8 21.9 201 867-1088 2-210 (221)
157 cd03294 ABC_Pro_Gly_Bertaine T 100.0 6.9E-33 1.5E-37 318.6 21.2 188 890-1088 35-230 (269)
158 cd03256 ABC_PhnC_transporter A 100.0 1.1E-32 2.4E-37 312.4 22.6 208 178-420 14-232 (241)
159 COG1122 CbiO ABC-type cobalt t 100.0 4.6E-33 1E-37 308.7 18.9 199 867-1088 4-208 (235)
160 cd03256 ABC_PhnC_transporter A 100.0 6.2E-33 1.3E-37 314.5 20.2 189 892-1088 14-214 (241)
161 PRK11831 putative ABC transpor 100.0 1.4E-32 3E-37 316.2 23.2 211 169-421 11-232 (269)
162 PRK11248 tauB taurine transpor 100.0 1.2E-32 2.6E-37 314.0 22.4 196 867-1088 2-198 (255)
163 TIGR00960 3a0501s02 Type II (G 100.0 5.9E-33 1.3E-37 309.3 19.5 190 178-411 16-216 (216)
164 KOG0058 Peptide exporter, ABC 100.0 2.9E-33 6.2E-38 338.1 18.2 205 176-422 479-691 (716)
165 cd03263 ABC_subfamily_A The AB 100.0 8.2E-33 1.8E-37 309.0 20.6 185 892-1088 15-201 (220)
166 PRK13634 cbiO cobalt transport 100.0 1.2E-32 2.6E-37 319.7 22.6 213 178-433 20-249 (290)
167 COG3840 ThiQ ABC-type thiamine 100.0 2.8E-33 6E-38 284.1 15.0 181 897-1088 17-199 (231)
168 PRK10070 glycine betaine trans 100.0 1.5E-32 3.3E-37 328.2 24.0 204 175-421 38-253 (400)
169 cd03235 ABC_Metallic_Cations A 100.0 5.7E-33 1.2E-37 308.7 19.0 187 892-1088 12-201 (213)
170 PRK09536 btuD corrinoid ABC tr 100.0 8.6E-33 1.9E-37 330.5 21.6 201 867-1088 4-208 (402)
171 PRK10908 cell division protein 100.0 1.4E-32 3E-37 307.5 21.9 199 867-1088 2-206 (222)
172 PRK11264 putative amino-acid A 100.0 1.4E-32 3E-37 313.3 22.2 199 867-1088 4-213 (250)
173 TIGR03608 L_ocin_972_ABC putat 100.0 1.1E-32 2.3E-37 304.9 20.7 185 892-1088 11-202 (206)
174 PRK09536 btuD corrinoid ABC tr 100.0 1.1E-32 2.4E-37 329.6 22.2 213 169-421 7-227 (402)
175 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.2E-32 2.7E-37 312.1 21.2 186 892-1088 14-205 (242)
176 TIGR03522 GldA_ABC_ATP gliding 100.0 1.4E-32 3E-37 320.8 22.2 197 867-1088 3-201 (301)
177 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1E-32 2.2E-37 307.9 19.9 190 178-411 17-218 (218)
178 PRK13538 cytochrome c biogenes 100.0 1.5E-32 3.2E-37 303.1 21.0 175 892-1079 14-190 (204)
179 cd03268 ABC_BcrA_bacitracin_re 100.0 1.1E-32 2.4E-37 305.3 20.0 196 172-415 7-208 (208)
180 PRK09493 glnQ glutamine ABC tr 100.0 1.8E-32 3.9E-37 310.4 22.2 199 867-1088 2-205 (240)
181 PRK13647 cbiO cobalt transport 100.0 2.3E-32 5.1E-37 314.8 23.4 212 177-432 17-239 (274)
182 cd03224 ABC_TM1139_LivF_branch 100.0 1.1E-32 2.4E-37 308.5 20.1 184 892-1088 13-201 (222)
183 cd03226 ABC_cobalt_CbiO_domain 100.0 9.5E-33 2E-37 305.1 19.3 187 178-412 13-205 (205)
184 TIGR02315 ABC_phnC phosphonate 100.0 1.4E-32 3.1E-37 311.8 21.1 209 177-420 14-233 (243)
185 TIGR02315 ABC_phnC phosphonate 100.0 8.9E-33 1.9E-37 313.6 19.3 189 892-1088 15-215 (243)
186 TIGR03415 ABC_choXWV_ATP choli 100.0 2.4E-32 5.3E-37 324.1 23.5 206 173-421 32-253 (382)
187 PRK13637 cbiO cobalt transport 100.0 1.8E-32 3.9E-37 317.7 21.8 203 867-1088 3-214 (287)
188 COG2274 SunT ABC-type bacterio 100.0 5.9E-33 1.3E-37 349.9 19.1 203 178-422 486-696 (709)
189 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.3E-32 7.2E-37 307.4 23.3 206 172-421 8-220 (236)
190 cd03257 ABC_NikE_OppD_transpor 100.0 1.8E-32 4E-37 307.9 21.1 187 893-1088 19-215 (228)
191 cd03266 ABC_NatA_sodium_export 100.0 1.6E-32 3.4E-37 306.3 20.4 193 179-415 19-218 (218)
192 PRK13643 cbiO cobalt transport 100.0 3.5E-32 7.5E-37 315.5 23.8 219 179-441 20-255 (288)
193 KOG0057 Mitochondrial Fe/S clu 100.0 1.9E-32 4.1E-37 319.9 21.5 202 178-422 365-574 (591)
194 PRK11831 putative ABC transpor 100.0 3E-32 6.4E-37 313.4 22.9 200 866-1088 7-213 (269)
195 PRK09493 glnQ glutamine ABC tr 100.0 2.8E-32 6.1E-37 308.8 22.4 206 172-421 8-224 (240)
196 KOG0058 Peptide exporter, ABC 100.0 1.8E-33 4E-38 339.8 13.4 194 864-1079 463-664 (716)
197 PRK11264 putative amino-acid A 100.0 2.6E-32 5.7E-37 311.0 22.1 207 171-420 9-231 (250)
198 PRK11629 lolD lipoprotein tran 100.0 3.3E-32 7.1E-37 306.8 22.6 196 178-417 22-229 (233)
199 PRK13650 cbiO cobalt transport 100.0 3.6E-32 7.7E-37 314.1 23.3 211 178-432 20-242 (279)
200 COG4175 ProV ABC-type proline/ 100.0 1.1E-32 2.4E-37 301.8 17.7 218 176-444 39-268 (386)
201 TIGR01189 ccmA heme ABC export 100.0 2.7E-32 5.9E-37 299.7 21.0 175 891-1079 12-188 (198)
202 COG1124 DppF ABC-type dipeptid 100.0 1.9E-32 4E-37 293.8 19.0 201 866-1088 3-211 (252)
203 PRK15079 oligopeptide ABC tran 100.0 3.7E-32 8E-37 319.6 23.5 204 178-421 34-250 (331)
204 PRK10895 lipopolysaccharide AB 100.0 2.9E-32 6.2E-37 308.9 21.7 199 867-1088 4-206 (241)
205 PRK10895 lipopolysaccharide AB 100.0 3.3E-32 7.2E-37 308.4 21.9 208 171-421 9-225 (241)
206 cd03264 ABC_drug_resistance_li 100.0 2.1E-32 4.5E-37 303.8 19.8 184 892-1088 13-198 (211)
207 cd03264 ABC_drug_resistance_li 100.0 2.1E-32 4.5E-37 303.7 19.8 197 173-415 8-211 (211)
208 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4.7E-32 1E-36 306.2 22.8 197 867-1088 2-201 (236)
209 PRK13634 cbiO cobalt transport 100.0 2.3E-32 5E-37 317.3 20.8 204 867-1089 3-216 (290)
210 PRK11247 ssuB aliphatic sulfon 100.0 2.8E-32 6.2E-37 310.4 20.9 199 169-418 16-219 (257)
211 PRK13651 cobalt transporter AT 100.0 3.3E-32 7.1E-37 317.1 21.9 200 178-421 20-253 (305)
212 COG1137 YhbG ABC-type (unclass 100.0 1.6E-33 3.5E-38 290.4 9.5 192 889-1089 14-209 (243)
213 PRK10619 histidine/lysine/argi 100.0 4.8E-32 1E-36 310.0 22.7 199 866-1088 5-221 (257)
214 PRK09473 oppD oligopeptide tra 100.0 5.7E-32 1.2E-36 318.2 23.6 209 177-421 28-250 (330)
215 PRK11247 ssuB aliphatic sulfon 100.0 3.2E-32 7E-37 309.9 20.8 191 866-1088 12-203 (257)
216 COG4988 CydD ABC-type transpor 100.0 4.7E-32 1E-36 322.5 22.8 201 179-422 335-543 (559)
217 PRK11248 tauB taurine transpor 100.0 5.1E-32 1.1E-36 308.8 22.3 202 172-418 8-216 (255)
218 PRK13647 cbiO cobalt transport 100.0 3.8E-32 8.2E-37 313.1 21.3 200 866-1088 4-207 (274)
219 PRK10584 putative ABC transpor 100.0 6.7E-32 1.5E-36 303.3 22.8 202 866-1088 6-215 (228)
220 PRK14247 phosphate ABC transpo 100.0 6.4E-32 1.4E-36 307.8 22.9 201 867-1088 4-214 (250)
221 PRK11144 modC molybdate transp 100.0 3.9E-32 8.5E-37 322.9 22.0 190 183-421 16-217 (352)
222 COG4525 TauB ABC-type taurine 100.0 1.6E-32 3.4E-37 281.2 15.9 181 892-1084 18-199 (259)
223 cd03231 ABC_CcmA_heme_exporter 100.0 3.5E-32 7.7E-37 299.3 20.0 180 892-1088 13-194 (201)
224 cd03233 ABC_PDR_domain1 The pl 100.0 5E-32 1.1E-36 298.2 21.2 183 866-1088 3-189 (202)
225 TIGR00972 3a0107s01c2 phosphat 100.0 5.4E-32 1.2E-36 307.8 22.1 199 867-1088 2-212 (247)
226 PRK13631 cbiO cobalt transport 100.0 6.1E-32 1.3E-36 316.6 23.0 211 178-433 39-279 (320)
227 PRK13539 cytochrome c biogenes 100.0 4.1E-32 8.9E-37 300.2 20.4 186 867-1079 3-188 (207)
228 TIGR03410 urea_trans_UrtE urea 100.0 4.7E-32 1E-36 305.0 21.2 203 172-420 7-219 (230)
229 PRK13631 cbiO cobalt transport 100.0 4.1E-32 8.8E-37 318.1 21.4 203 866-1088 21-245 (320)
230 cd03267 ABC_NatA_like Similar 100.0 9.1E-32 2E-36 303.5 23.1 199 174-415 30-236 (236)
231 PRK13635 cbiO cobalt transport 100.0 7.2E-32 1.6E-36 311.4 22.6 211 178-432 20-242 (279)
232 PRK13650 cbiO cobalt transport 100.0 3.8E-32 8.3E-37 313.9 20.2 201 866-1088 4-209 (279)
233 PRK11124 artP arginine transpo 100.0 6.9E-32 1.5E-36 306.0 21.7 198 867-1088 3-210 (242)
234 PRK11614 livF leucine/isoleuci 100.0 6.2E-32 1.3E-36 305.4 21.2 206 170-421 10-225 (237)
235 PRK13643 cbiO cobalt transport 100.0 6.6E-32 1.4E-36 313.2 21.9 203 867-1089 2-214 (288)
236 PRK11022 dppD dipeptide transp 100.0 8.4E-32 1.8E-36 316.6 23.0 208 178-421 20-242 (326)
237 TIGR03005 ectoine_ehuA ectoine 100.0 6.9E-32 1.5E-36 307.8 21.7 198 868-1088 2-216 (252)
238 PRK13636 cbiO cobalt transport 100.0 7.9E-32 1.7E-36 311.9 22.4 209 170-421 10-230 (283)
239 PRK13646 cbiO cobalt transport 100.0 5.3E-32 1.2E-36 313.8 20.9 203 866-1088 2-215 (286)
240 cd03292 ABC_FtsE_transporter F 100.0 5.4E-32 1.2E-36 301.2 20.0 190 178-411 14-214 (214)
241 cd03234 ABCG_White The White s 100.0 7.9E-32 1.7E-36 302.3 21.5 199 177-415 19-226 (226)
242 TIGR02673 FtsE cell division A 100.0 6.2E-32 1.3E-36 300.7 20.4 190 177-410 14-214 (214)
243 cd03257 ABC_NikE_OppD_transpor 100.0 9.7E-32 2.1E-36 302.1 22.2 196 179-415 19-228 (228)
244 COG4181 Predicted ABC-type tra 100.0 3.3E-32 7.1E-37 273.3 16.2 180 890-1079 21-208 (228)
245 TIGR02142 modC_ABC molybdenum 100.0 8.7E-32 1.9E-36 320.5 23.0 194 183-421 15-220 (354)
246 PRK13540 cytochrome c biogenes 100.0 8.5E-32 1.8E-36 296.2 21.2 185 867-1079 2-188 (200)
247 PRK14267 phosphate ABC transpo 100.0 9.6E-32 2.1E-36 306.9 22.3 206 866-1088 4-217 (253)
248 TIGR01978 sufC FeS assembly AT 100.0 8.7E-32 1.9E-36 305.5 21.8 192 892-1088 13-214 (243)
249 TIGR00972 3a0107s01c2 phosphat 100.0 1.1E-31 2.3E-36 305.3 22.6 208 172-421 8-231 (247)
250 PRK11614 livF leucine/isoleuci 100.0 5.4E-32 1.2E-36 305.9 20.0 197 866-1088 5-206 (237)
251 TIGR03411 urea_trans_UrtD urea 100.0 1.1E-31 2.4E-36 304.3 22.5 213 171-420 8-229 (242)
252 PRK13646 cbiO cobalt transport 100.0 9.3E-32 2E-36 311.8 22.2 200 178-421 20-234 (286)
253 PRK13636 cbiO cobalt transport 100.0 7.9E-32 1.7E-36 311.9 21.6 200 866-1088 5-211 (283)
254 PRK13641 cbiO cobalt transport 100.0 8.3E-32 1.8E-36 312.3 21.8 200 178-421 20-233 (287)
255 PRK13543 cytochrome c biogenes 100.0 1E-31 2.2E-36 298.7 21.5 196 866-1088 11-206 (214)
256 TIGR03740 galliderm_ABC gallid 100.0 9.9E-32 2.2E-36 300.9 21.6 181 892-1088 13-193 (223)
257 TIGR03411 urea_trans_UrtD urea 100.0 1E-31 2.2E-36 304.7 21.8 200 867-1088 3-211 (242)
258 PRK13651 cobalt transporter AT 100.0 7.3E-32 1.6E-36 314.2 20.9 203 867-1088 3-234 (305)
259 PRK13548 hmuV hemin importer A 100.0 1.1E-31 2.5E-36 306.7 22.2 208 171-421 8-229 (258)
260 PRK11300 livG leucine/isoleuci 100.0 1E-31 2.2E-36 307.1 21.7 202 866-1088 5-223 (255)
261 PRK11300 livG leucine/isoleuci 100.0 1.2E-31 2.6E-36 306.5 22.4 224 169-420 9-241 (255)
262 cd03298 ABC_ThiQ_thiamine_tran 100.0 8.3E-32 1.8E-36 298.9 20.4 181 897-1088 16-198 (211)
263 TIGR03005 ectoine_ehuA ectoine 100.0 1.2E-31 2.6E-36 305.9 22.1 205 173-420 8-234 (252)
264 PRK14273 phosphate ABC transpo 100.0 1.2E-31 2.6E-36 306.2 22.2 200 866-1088 7-218 (254)
265 PRK11231 fecE iron-dicitrate t 100.0 8.7E-32 1.9E-36 307.5 20.8 201 867-1088 3-207 (255)
266 PRK13644 cbiO cobalt transport 100.0 7.6E-32 1.7E-36 310.6 20.5 198 867-1088 2-204 (274)
267 COG0444 DppD ABC-type dipeptid 100.0 1.3E-31 2.8E-36 300.0 21.6 228 176-446 16-259 (316)
268 PRK10908 cell division protein 100.0 1E-31 2.2E-36 300.5 20.9 192 177-412 14-216 (222)
269 PRK11308 dppF dipeptide transp 100.0 1.7E-31 3.7E-36 313.8 23.7 202 178-421 28-243 (327)
270 PRK13548 hmuV hemin importer A 100.0 1.1E-31 2.3E-36 306.9 21.3 199 867-1089 3-211 (258)
271 TIGR02211 LolD_lipo_ex lipopro 100.0 1.2E-31 2.6E-36 299.9 21.2 191 178-412 18-220 (221)
272 PRK14247 phosphate ABC transpo 100.0 1.7E-31 3.6E-36 304.4 22.8 215 171-421 9-233 (250)
273 TIGR02982 heterocyst_DevA ABC 100.0 1.5E-31 3.1E-36 298.9 21.8 202 867-1088 2-210 (220)
274 COG4525 TauB ABC-type taurine 100.0 7.5E-32 1.6E-36 276.2 17.7 199 178-421 18-223 (259)
275 cd03267 ABC_NatA_like Similar 100.0 1.2E-31 2.6E-36 302.5 21.3 188 890-1088 32-223 (236)
276 TIGR03740 galliderm_ABC gallid 100.0 1.4E-31 3E-36 299.7 21.5 197 173-418 8-209 (223)
277 PRK13644 cbiO cobalt transport 100.0 1.3E-31 2.9E-36 308.6 21.9 200 177-421 14-223 (274)
278 PRK13635 cbiO cobalt transport 100.0 9E-32 2E-36 310.6 20.6 200 866-1088 5-209 (279)
279 PRK10619 histidine/lysine/argi 100.0 1.6E-31 3.4E-36 305.7 22.3 209 170-421 10-240 (257)
280 PRK13638 cbiO cobalt transport 100.0 1.9E-31 4.2E-36 307.2 23.0 206 172-421 8-224 (271)
281 PRK11174 cysteine/glutathione 100.0 9.4E-32 2E-36 343.3 22.6 203 177-422 362-572 (588)
282 TIGR01978 sufC FeS assembly AT 100.0 1.5E-31 3.3E-36 303.5 21.8 215 171-421 6-233 (243)
283 cd03232 ABC_PDR_domain2 The pl 100.0 1.3E-31 2.9E-36 292.5 20.4 176 866-1088 3-178 (192)
284 PRK13641 cbiO cobalt transport 100.0 1.2E-31 2.7E-36 310.9 21.3 203 867-1088 3-214 (287)
285 TIGR02868 CydC thiol reductant 100.0 2.9E-32 6.2E-37 343.7 17.3 188 865-1078 333-529 (529)
286 PRK10070 glycine betaine trans 100.0 1.2E-31 2.5E-36 320.6 21.5 187 891-1088 40-234 (400)
287 cd03225 ABC_cobalt_CbiO_domain 100.0 1.2E-31 2.5E-36 297.8 20.1 189 178-410 14-211 (211)
288 PRK13632 cbiO cobalt transport 100.0 1.3E-31 2.9E-36 308.4 21.3 200 866-1088 7-211 (271)
289 cd03233 ABC_PDR_domain1 The pl 100.0 1.4E-31 2.9E-36 294.8 20.3 178 176-415 18-202 (202)
290 PRK13652 cbiO cobalt transport 100.0 1.6E-31 3.5E-36 308.6 21.8 199 867-1088 4-207 (277)
291 PRK14241 phosphate transporter 100.0 2.1E-31 4.6E-36 304.8 22.6 201 866-1088 4-216 (258)
292 PRK14268 phosphate ABC transpo 100.0 1.9E-31 4.1E-36 305.1 22.2 212 170-420 17-240 (258)
293 PRK15079 oligopeptide ABC tran 100.0 2.6E-31 5.6E-36 312.5 23.8 214 866-1088 8-231 (331)
294 TIGR01184 ntrCD nitrate transp 100.0 1.1E-31 2.4E-36 301.6 19.9 183 895-1088 1-184 (230)
295 PRK10575 iron-hydroxamate tran 100.0 1.4E-31 3.1E-36 307.2 21.2 203 866-1089 11-218 (265)
296 cd03235 ABC_Metallic_Cations A 100.0 1.1E-31 2.5E-36 298.3 19.7 200 173-415 7-213 (213)
297 PRK14250 phosphate ABC transpo 100.0 1.8E-31 3.8E-36 302.3 21.6 201 172-420 10-219 (241)
298 PRK13652 cbiO cobalt transport 100.0 2.1E-31 4.6E-36 307.6 22.6 201 178-421 17-226 (277)
299 PRK14242 phosphate transporter 100.0 2.4E-31 5.2E-36 303.6 22.7 206 864-1088 4-217 (253)
300 TIGR02769 nickel_nikE nickel i 100.0 2.1E-31 4.6E-36 305.8 22.3 208 867-1088 3-220 (265)
301 COG4152 ABC-type uncharacteriz 100.0 5.4E-32 1.2E-36 286.8 15.9 212 168-424 5-221 (300)
302 PRK13649 cbiO cobalt transport 100.0 1.7E-31 3.8E-36 309.1 21.7 202 867-1088 3-214 (280)
303 PRK10253 iron-enterobactin tra 100.0 1.3E-31 2.7E-36 307.7 20.4 203 866-1089 7-214 (265)
304 cd03300 ABC_PotA_N PotA is an 100.0 2.9E-31 6.4E-36 298.8 22.8 187 892-1089 13-201 (232)
305 PRK14245 phosphate ABC transpo 100.0 2.7E-31 5.9E-36 302.5 22.7 204 866-1088 3-214 (250)
306 cd03300 ABC_PotA_N PotA is an 100.0 3.3E-31 7.1E-36 298.4 23.1 206 173-421 8-219 (232)
307 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.9E-31 4.1E-36 296.1 20.8 190 183-415 16-211 (211)
308 PRK11124 artP arginine transpo 100.0 1.7E-31 3.7E-36 302.7 20.8 205 172-420 9-228 (242)
309 TIGR02769 nickel_nikE nickel i 100.0 2.7E-31 5.8E-36 305.0 22.6 203 177-421 23-239 (265)
310 PRK14242 phosphate transporter 100.0 2.8E-31 6.1E-36 303.0 22.6 213 170-420 11-235 (253)
311 PRK10575 iron-hydroxamate tran 100.0 2.1E-31 4.6E-36 305.8 21.7 212 170-420 16-235 (265)
312 PRK13648 cbiO cobalt transport 100.0 3E-31 6.5E-36 305.3 23.0 200 178-421 22-230 (269)
313 PRK10744 pstB phosphate transp 100.0 2.6E-31 5.6E-36 304.4 22.3 203 863-1088 10-224 (260)
314 PRK14237 phosphate transporter 100.0 3.3E-31 7.3E-36 304.4 23.3 209 861-1088 15-231 (267)
315 PRK14273 phosphate ABC transpo 100.0 2.3E-31 5E-36 303.9 21.7 210 170-421 12-237 (254)
316 PRK13649 cbiO cobalt transport 100.0 3.8E-31 8.3E-36 306.3 23.8 200 178-421 20-233 (280)
317 PRK10253 iron-enterobactin tra 100.0 2.1E-31 4.5E-36 305.9 21.3 213 170-421 12-232 (265)
318 PRK13638 cbiO cobalt transport 100.0 1.6E-31 3.4E-36 307.9 20.4 198 867-1088 2-205 (271)
319 PRK14268 phosphate ABC transpo 100.0 2.9E-31 6.2E-36 303.6 22.4 199 866-1088 12-222 (258)
320 PRK13639 cbiO cobalt transport 100.0 4.3E-31 9.4E-36 304.6 23.9 200 178-421 15-225 (275)
321 TIGR03410 urea_trans_UrtE urea 100.0 1.7E-31 3.7E-36 300.5 20.0 183 892-1088 13-201 (230)
322 TIGR03873 F420-0_ABC_ATP propo 100.0 2E-31 4.4E-36 304.7 20.9 201 867-1088 2-206 (256)
323 PRK13633 cobalt transporter AT 100.0 3.1E-31 6.7E-36 306.7 22.5 200 178-421 23-232 (280)
324 PRK09984 phosphonate/organopho 100.0 2E-31 4.3E-36 305.8 20.7 204 866-1088 4-222 (262)
325 TIGR01277 thiQ thiamine ABC tr 100.0 2.2E-31 4.8E-36 295.9 20.5 184 894-1088 13-198 (213)
326 cd03299 ABC_ModC_like Archeal 100.0 3.8E-31 8.2E-36 298.4 22.7 199 180-421 14-218 (235)
327 PRK14235 phosphate transporter 100.0 3.2E-31 6.8E-36 304.6 22.3 205 866-1088 19-231 (267)
328 PRK14267 phosphate ABC transpo 100.0 3.1E-31 6.7E-36 302.7 22.0 216 170-421 9-236 (253)
329 PRK13640 cbiO cobalt transport 100.0 4.1E-31 9E-36 305.8 23.3 203 178-421 20-231 (282)
330 TIGR01184 ntrCD nitrate transp 100.0 2.6E-31 5.7E-36 298.6 21.0 196 181-419 1-201 (230)
331 cd03213 ABCG_EPDR ABCG transpo 100.0 2.8E-31 6E-36 290.4 20.5 178 866-1089 3-182 (194)
332 PRK13632 cbiO cobalt transport 100.0 2.6E-31 5.5E-36 306.0 21.2 201 177-421 21-230 (271)
333 PRK13639 cbiO cobalt transport 100.0 2.7E-31 5.9E-36 306.3 21.3 199 867-1088 2-206 (275)
334 PRK11231 fecE iron-dicitrate t 100.0 2.6E-31 5.5E-36 303.6 20.9 210 171-420 8-225 (255)
335 COG0410 LivF ABC-type branched 100.0 1.7E-31 3.7E-36 284.6 17.9 187 890-1088 14-206 (237)
336 PRK10584 putative ABC transpor 100.0 4.3E-31 9.4E-36 296.8 22.1 193 178-414 23-227 (228)
337 PRK09984 phosphonate/organopho 100.0 2.9E-31 6.4E-36 304.3 21.1 219 170-420 9-240 (262)
338 TIGR02770 nickel_nikD nickel i 100.0 4E-31 8.6E-36 297.3 21.7 202 180-421 1-214 (230)
339 TIGR00968 3a0106s01 sulfate AB 100.0 5E-31 1.1E-35 297.8 22.6 205 174-421 9-219 (237)
340 TIGR03873 F420-0_ABC_ATP propo 100.0 3.7E-31 7.9E-36 302.5 21.7 209 172-420 8-224 (256)
341 PRK14235 phosphate transporter 100.0 3.9E-31 8.5E-36 303.8 22.0 216 169-421 23-250 (267)
342 PRK15093 antimicrobial peptide 100.0 4.6E-31 1E-35 311.3 23.1 215 176-421 18-247 (330)
343 KOG0062 ATPase component of AB 100.0 2.1E-31 4.5E-36 308.1 19.6 180 863-1078 359-539 (582)
344 PRK13549 xylose transporter AT 100.0 2.7E-31 5.8E-36 332.4 22.2 204 866-1088 5-212 (506)
345 PRK14269 phosphate ABC transpo 100.0 5.3E-31 1.1E-35 299.4 22.6 214 171-421 8-229 (246)
346 cd03262 ABC_HisP_GlnQ_permease 100.0 2.1E-31 4.5E-36 296.2 18.8 195 173-411 8-213 (213)
347 PRK10771 thiQ thiamine transpo 100.0 5.6E-31 1.2E-35 296.6 22.4 197 182-421 16-218 (232)
348 TIGR03415 ABC_choXWV_ATP choli 100.0 3E-31 6.5E-36 314.8 21.2 188 890-1088 35-234 (382)
349 COG4604 CeuD ABC-type enteroch 100.0 4.4E-32 9.4E-37 278.7 12.0 212 169-421 5-224 (252)
350 PRK13645 cbiO cobalt transport 100.0 3.1E-31 6.6E-36 308.2 20.7 204 866-1088 6-220 (289)
351 TIGR00968 3a0106s01 sulfate AB 100.0 5E-31 1.1E-35 297.8 21.8 186 892-1088 13-200 (237)
352 PRK13648 cbiO cobalt transport 100.0 4.6E-31 9.9E-36 303.7 21.9 200 866-1088 7-211 (269)
353 COG4181 Predicted ABC-type tra 100.0 2.9E-31 6.3E-36 266.5 17.5 198 172-413 17-226 (228)
354 PRK14256 phosphate ABC transpo 100.0 6.1E-31 1.3E-35 300.0 22.7 205 866-1088 4-216 (252)
355 COG4988 CydD ABC-type transpor 100.0 1.1E-31 2.3E-36 319.5 17.0 190 864-1079 318-516 (559)
356 PRK13547 hmuV hemin importer A 100.0 3.4E-31 7.4E-36 304.1 20.5 203 867-1088 2-224 (272)
357 PRK14256 phosphate ABC transpo 100.0 7.1E-31 1.5E-35 299.5 22.9 215 170-421 9-235 (252)
358 PRK14270 phosphate ABC transpo 100.0 6.7E-31 1.5E-35 299.5 22.6 214 169-421 8-234 (251)
359 PRK14244 phosphate ABC transpo 100.0 5.3E-31 1.2E-35 300.3 21.7 192 892-1088 18-217 (251)
360 PRK14241 phosphate transporter 100.0 5.7E-31 1.2E-35 301.3 22.0 215 170-421 9-241 (258)
361 PRK14245 phosphate ABC transpo 100.0 5.3E-31 1.2E-35 300.2 21.6 212 171-421 9-233 (250)
362 PRK13633 cobalt transporter AT 100.0 4.1E-31 8.9E-36 305.6 20.8 204 866-1088 4-213 (280)
363 PRK14259 phosphate ABC transpo 100.0 5.8E-31 1.3E-35 302.6 21.8 199 865-1088 12-222 (269)
364 COG2274 SunT ABC-type bacterio 100.0 8.3E-32 1.8E-36 339.5 16.1 201 861-1088 466-676 (709)
365 PRK14269 phosphate ABC transpo 100.0 6E-31 1.3E-35 298.9 21.7 204 867-1088 3-210 (246)
366 PRK15112 antimicrobial peptide 100.0 6.5E-31 1.4E-35 302.0 22.1 202 178-421 26-238 (267)
367 PRK14250 phosphate ABC transpo 100.0 3.9E-31 8.5E-36 299.4 20.0 194 866-1088 3-201 (241)
368 PRK14274 phosphate ABC transpo 100.0 6.9E-31 1.5E-35 300.8 22.2 204 866-1088 12-223 (259)
369 cd03299 ABC_ModC_like Archeal 100.0 7.6E-31 1.6E-35 296.0 22.1 184 894-1088 14-199 (235)
370 PRK13645 cbiO cobalt transport 100.0 5.2E-31 1.1E-35 306.3 21.5 200 179-421 25-239 (289)
371 PRK14239 phosphate transporter 100.0 7.5E-31 1.6E-35 299.4 22.2 214 170-421 10-235 (252)
372 PRK14240 phosphate transporter 100.0 7E-31 1.5E-35 299.2 21.9 200 866-1088 3-214 (250)
373 PRK14262 phosphate ABC transpo 100.0 7.1E-31 1.5E-35 299.2 21.9 203 867-1088 4-214 (250)
374 PRK14239 phosphate transporter 100.0 7.7E-31 1.7E-35 299.3 22.2 204 866-1088 5-216 (252)
375 PRK14270 phosphate ABC transpo 100.0 7.7E-31 1.7E-35 299.0 22.2 200 866-1088 4-215 (251)
376 PRK10247 putative ABC transpor 100.0 5.9E-31 1.3E-35 294.9 20.8 195 866-1088 7-206 (225)
377 PRK10771 thiQ thiamine transpo 100.0 4.5E-31 9.7E-36 297.4 19.9 196 867-1088 2-199 (232)
378 PRK11701 phnK phosphonate C-P 100.0 1E-30 2.2E-35 299.2 23.0 211 169-421 10-240 (258)
379 TIGR02142 modC_ABC molybdenum 100.0 4.3E-31 9.3E-36 314.5 20.7 179 897-1088 15-201 (354)
380 PRK15112 antimicrobial peptide 100.0 6E-31 1.3E-35 302.3 21.1 209 866-1088 4-219 (267)
381 PRK13640 cbiO cobalt transport 100.0 4.6E-31 9.9E-36 305.4 20.3 202 866-1088 5-212 (282)
382 TIGR02324 CP_lyasePhnL phospho 100.0 1E-30 2.2E-35 292.9 22.4 205 867-1088 2-218 (224)
383 COG4559 ABC-type hemin transpo 100.0 2.3E-31 4.9E-36 276.9 15.6 191 867-1080 2-203 (259)
384 PRK14274 phosphate ABC transpo 100.0 1E-30 2.2E-35 299.4 22.5 216 168-421 15-242 (259)
385 PRK14237 phosphate transporter 100.0 1.2E-30 2.5E-35 299.9 23.1 216 168-421 23-250 (267)
386 cd03230 ABC_DR_subfamily_A Thi 100.0 5E-31 1.1E-35 283.2 18.8 150 892-1088 13-164 (173)
387 PRK11174 cysteine/glutathione 100.0 1.6E-31 3.5E-36 341.2 17.8 196 865-1089 348-553 (588)
388 PRK09473 oppD oligopeptide tra 100.0 1.1E-30 2.4E-35 307.3 23.3 209 866-1088 12-231 (330)
389 cd03297 ABC_ModC_molybdenum_tr 100.0 9.8E-31 2.1E-35 291.0 21.7 196 172-415 7-214 (214)
390 KOG0057 Mitochondrial Fe/S clu 100.0 1.3E-31 2.8E-36 312.9 15.0 198 863-1089 348-555 (591)
391 PRK13541 cytochrome c biogenes 100.0 8.8E-31 1.9E-35 287.0 20.7 183 867-1079 2-184 (195)
392 PRK14262 phosphate ABC transpo 100.0 9.6E-31 2.1E-35 298.1 21.8 213 171-421 9-233 (250)
393 PRK14257 phosphate ABC transpo 100.0 1.1E-30 2.5E-35 306.7 22.9 207 177-421 94-312 (329)
394 PRK11308 dppF dipeptide transp 100.0 1.2E-30 2.6E-35 306.7 23.0 210 866-1088 5-224 (327)
395 PRK11022 dppD dipeptide transp 100.0 1.5E-30 3.3E-35 305.9 23.9 208 867-1088 4-223 (326)
396 TIGR01277 thiQ thiamine ABC tr 100.0 1.2E-30 2.6E-35 290.1 21.8 194 180-416 13-212 (213)
397 PRK14244 phosphate ABC transpo 100.0 9E-31 1.9E-35 298.5 21.3 214 171-421 11-236 (251)
398 COG0411 LivG ABC-type branched 100.0 2.6E-31 5.7E-36 285.3 15.7 193 888-1088 13-219 (250)
399 PRK14253 phosphate ABC transpo 100.0 1.1E-30 2.3E-35 297.6 21.6 204 866-1088 3-213 (249)
400 PRK11144 modC molybdate transp 100.0 5.8E-31 1.3E-35 312.9 20.2 175 897-1088 16-198 (352)
401 PRK14236 phosphate transporter 100.0 1.6E-30 3.4E-35 299.7 23.2 206 864-1088 23-236 (272)
402 TIGR02770 nickel_nikD nickel i 100.0 5.9E-31 1.3E-35 295.9 19.2 187 894-1089 1-196 (230)
403 PRK14240 phosphate transporter 100.0 1.3E-30 2.7E-35 297.2 22.0 213 171-421 9-233 (250)
404 cd03297 ABC_ModC_molybdenum_tr 100.0 8.2E-31 1.8E-35 291.6 19.9 182 891-1088 12-201 (214)
405 PRK13642 cbiO cobalt transport 100.0 8.6E-31 1.9E-35 302.5 20.7 201 866-1088 4-209 (277)
406 PRK13547 hmuV hemin importer A 100.0 1.1E-30 2.3E-35 300.0 21.3 214 171-420 7-242 (272)
407 PRK10418 nikD nickel transport 100.0 1.9E-30 4.2E-35 296.1 23.2 206 177-421 15-229 (254)
408 PRK10744 pstB phosphate transp 100.0 1.3E-30 2.9E-35 298.5 21.8 215 169-421 17-243 (260)
409 PRK14260 phosphate ABC transpo 100.0 1.5E-30 3.3E-35 297.9 22.1 200 866-1088 7-218 (259)
410 PRK14259 phosphate ABC transpo 100.0 9.2E-31 2E-35 300.9 20.4 214 168-421 16-252 (269)
411 PRK10762 D-ribose transporter 100.0 8.9E-31 1.9E-35 327.3 21.9 201 867-1088 5-210 (501)
412 PRK14271 phosphate ABC transpo 100.0 1.8E-30 3.9E-35 299.3 22.6 215 169-421 25-250 (276)
413 PRK15056 manganese/iron transp 100.0 1.2E-30 2.7E-35 300.5 20.9 203 866-1088 6-211 (272)
414 PRK14272 phosphate ABC transpo 100.0 2.2E-30 4.8E-35 295.6 22.8 201 866-1088 4-216 (252)
415 PRK14272 phosphate ABC transpo 100.0 2.2E-30 4.8E-35 295.6 22.5 215 170-421 9-235 (252)
416 PRK14253 phosphate ABC transpo 100.0 1.6E-30 3.5E-35 296.1 21.4 213 170-420 8-231 (249)
417 PRK14258 phosphate ABC transpo 100.0 2.8E-30 6E-35 295.9 23.2 205 866-1088 7-220 (261)
418 PRK14271 phosphate ABC transpo 100.0 2.4E-30 5.3E-35 298.2 22.8 204 866-1088 21-231 (276)
419 PRK14249 phosphate ABC transpo 100.0 3.3E-30 7.2E-35 293.8 23.5 213 171-421 10-234 (251)
420 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.1E-30 2.5E-35 338.6 22.2 201 177-422 465-673 (686)
421 COG4618 ArpD ABC-type protease 100.0 1.2E-30 2.7E-35 301.5 20.0 207 177-424 348-562 (580)
422 COG1132 MdlB ABC-type multidru 100.0 8.3E-31 1.8E-35 332.9 20.5 211 170-422 333-552 (567)
423 PRK09700 D-allose transporter 100.0 1.3E-30 2.8E-35 326.7 21.6 202 866-1088 5-214 (510)
424 PRK13642 cbiO cobalt transport 100.0 3.2E-30 6.9E-35 297.8 23.1 200 178-421 20-228 (277)
425 PRK14249 phosphate ABC transpo 100.0 2.8E-30 6.1E-35 294.4 22.4 204 866-1088 4-215 (251)
426 PRK14261 phosphate ABC transpo 100.0 2.6E-30 5.6E-35 295.0 22.0 204 866-1088 6-217 (253)
427 COG4148 ModC ABC-type molybdat 100.0 3.1E-31 6.6E-36 285.7 13.4 190 183-421 16-217 (352)
428 PRK14263 phosphate ABC transpo 100.0 2.1E-30 4.6E-35 296.5 21.2 212 170-421 13-244 (261)
429 PRK14257 phosphate ABC transpo 100.0 2.8E-30 6E-35 303.5 22.7 206 865-1088 79-293 (329)
430 PRK11288 araG L-arabinose tran 100.0 1.7E-30 3.7E-35 324.8 22.2 202 866-1088 4-209 (501)
431 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2.2E-30 4.7E-35 289.9 20.7 180 889-1088 32-211 (224)
432 PRK15093 antimicrobial peptide 100.0 3.1E-30 6.8E-35 304.3 23.0 211 866-1088 3-228 (330)
433 PRK14261 phosphate ABC transpo 100.0 3.4E-30 7.4E-35 294.1 22.5 214 170-421 11-236 (253)
434 PRK14255 phosphate ABC transpo 100.0 3.9E-30 8.4E-35 293.5 22.9 204 866-1088 5-216 (252)
435 PRK10418 nikD nickel transport 100.0 3.1E-30 6.8E-35 294.4 22.1 198 866-1088 4-210 (254)
436 PRK14254 phosphate ABC transpo 100.0 3.3E-30 7.1E-35 298.4 22.4 198 866-1088 39-248 (285)
437 PRK14258 phosphate ABC transpo 100.0 4E-30 8.6E-35 294.6 22.8 216 170-421 12-244 (261)
438 TIGR02633 xylG D-xylose ABC tr 100.0 2.3E-30 5E-35 323.9 22.7 203 867-1088 2-210 (500)
439 PRK14275 phosphate ABC transpo 100.0 3.1E-30 6.7E-35 298.9 22.0 215 169-421 43-269 (286)
440 PRK14251 phosphate ABC transpo 100.0 3.2E-30 7E-35 294.0 21.8 201 866-1089 4-216 (251)
441 PRK14251 phosphate ABC transpo 100.0 3.2E-30 6.9E-35 294.0 21.8 214 170-421 9-234 (251)
442 PRK14248 phosphate ABC transpo 100.0 3.6E-30 7.9E-35 296.2 22.3 215 169-421 25-251 (268)
443 TIGR02323 CP_lyasePhnK phospho 100.0 4.3E-30 9.2E-35 293.3 22.6 210 170-421 8-237 (253)
444 PRK14236 phosphate transporter 100.0 3.5E-30 7.6E-35 296.8 22.0 213 170-420 30-254 (272)
445 PRK14275 phosphate ABC transpo 100.0 3.5E-30 7.5E-35 298.5 22.0 200 866-1088 39-250 (286)
446 PRK10419 nikE nickel transport 100.0 3.5E-30 7.7E-35 295.9 21.9 203 177-421 24-240 (268)
447 PRK11701 phnK phosphonate C-P 100.0 3.4E-30 7.3E-35 294.9 21.6 200 866-1088 6-221 (258)
448 COG1123 ATPase components of v 100.0 3.2E-30 7E-35 308.6 22.2 205 176-421 302-518 (539)
449 PRK14248 phosphate ABC transpo 100.0 3.6E-30 7.9E-35 296.2 21.9 200 866-1088 21-232 (268)
450 PRK10790 putative multidrug tr 100.0 1.6E-30 3.5E-35 332.0 21.0 202 178-422 354-563 (592)
451 PRK14263 phosphate ABC transpo 100.0 4.7E-30 1E-34 293.7 22.5 190 891-1088 20-217 (261)
452 PRK03695 vitamin B12-transport 100.0 3.6E-30 7.8E-35 292.6 21.3 195 180-420 11-220 (248)
453 cd03229 ABC_Class3 This class 100.0 1.7E-30 3.7E-35 280.4 17.6 152 892-1088 13-170 (178)
454 PRK10261 glutathione transport 100.0 4.1E-30 8.8E-35 327.9 24.0 202 178-421 337-552 (623)
455 PRK14260 phosphate ABC transpo 100.0 3.7E-30 8E-35 294.7 21.2 214 170-421 12-242 (259)
456 cd03245 ABCC_bacteriocin_expor 100.0 1.2E-30 2.6E-35 291.6 16.6 196 867-1088 3-207 (220)
457 PRK14246 phosphate ABC transpo 100.0 7.1E-30 1.5E-34 291.5 23.2 215 170-421 15-240 (257)
458 TIGR03608 L_ocin_972_ABC putat 100.0 3.7E-30 8.1E-35 284.6 20.1 187 175-406 8-206 (206)
459 PRK15439 autoinducer 2 ABC tra 100.0 2.8E-30 6.1E-35 323.0 21.6 195 866-1088 11-209 (510)
460 cd03252 ABCC_Hemolysin The ABC 100.0 7.6E-31 1.6E-35 296.6 14.9 181 892-1088 15-205 (237)
461 COG1245 Predicted ATPase, RNas 100.0 5.4E-30 1.2E-34 291.3 21.7 160 895-1079 357-517 (591)
462 PRK10419 nikE nickel transport 100.0 4.8E-30 1E-34 294.9 21.6 208 867-1088 4-221 (268)
463 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.1E-30 2.3E-35 338.8 18.3 195 865-1089 450-654 (686)
464 PRK14255 phosphate ABC transpo 100.0 6.1E-30 1.3E-34 291.9 22.3 214 170-421 10-235 (252)
465 cd03252 ABCC_Hemolysin The ABC 100.0 2.3E-30 5E-35 292.7 18.7 200 178-421 15-224 (237)
466 CHL00131 ycf16 sulfate ABC tra 100.0 6.1E-30 1.3E-34 291.9 22.3 198 866-1080 7-213 (252)
467 PRK10790 putative multidrug tr 100.0 1.3E-30 2.9E-35 332.8 18.6 196 865-1089 339-544 (592)
468 PRK11176 lipid transporter ATP 100.0 1.2E-30 2.5E-35 333.0 17.9 199 865-1089 340-548 (582)
469 PRK11176 lipid transporter ATP 100.0 1.6E-30 3.5E-35 331.8 19.1 204 178-422 356-567 (582)
470 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.1E-30 4.5E-35 337.6 20.5 202 177-422 491-700 (710)
471 cd03213 ABCG_EPDR ABCG transpo 100.0 3.5E-30 7.5E-35 281.8 18.9 165 178-415 22-194 (194)
472 KOG0066 eIF2-interacting prote 100.0 2.6E-29 5.6E-34 281.6 25.7 177 864-1079 584-762 (807)
473 COG4619 ABC-type uncharacteriz 100.0 6.9E-31 1.5E-35 263.0 11.7 193 174-411 12-212 (223)
474 PRK14243 phosphate transporter 100.0 5.2E-30 1.1E-34 294.0 20.8 202 866-1088 10-219 (264)
475 PRK14246 phosphate ABC transpo 100.0 6.9E-30 1.5E-34 291.6 21.7 201 866-1088 10-221 (257)
476 cd03245 ABCC_bacteriocin_expor 100.0 2.3E-30 4.9E-35 289.4 17.3 190 178-415 17-220 (220)
477 PRK14238 phosphate transporter 100.0 6.5E-30 1.4E-34 294.2 21.5 214 169-420 28-253 (271)
478 COG4987 CydC ABC-type transpor 100.0 1.3E-30 2.9E-35 304.5 15.8 197 177-422 350-561 (573)
479 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 6.8E-30 1.5E-34 285.9 20.8 192 171-415 28-224 (224)
480 cd03215 ABC_Carb_Monos_II This 100.0 3.7E-30 8E-35 278.8 18.0 152 894-1088 15-173 (182)
481 PRK14254 phosphate ABC transpo 100.0 7.3E-30 1.6E-34 295.5 21.6 212 169-420 43-267 (285)
482 PRK14238 phosphate transporter 100.0 6.2E-30 1.3E-34 294.4 20.9 203 866-1088 24-235 (271)
483 TIGR02323 CP_lyasePhnK phospho 100.0 7.1E-30 1.5E-34 291.5 21.2 200 866-1088 3-218 (253)
484 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.8E-30 6E-35 292.2 17.5 201 178-422 16-226 (238)
485 PRK11160 cysteine/glutathione 100.0 3.5E-30 7.6E-35 326.7 20.1 196 178-422 353-562 (574)
486 PRK09580 sufC cysteine desulfu 100.0 7.9E-30 1.7E-34 290.3 21.0 204 867-1088 2-215 (248)
487 cd03251 ABCC_MsbA MsbA is an e 100.0 1.4E-30 3.1E-35 293.8 14.8 180 893-1088 16-205 (234)
488 PRK14265 phosphate ABC transpo 100.0 1E-29 2.2E-34 292.9 22.0 203 865-1088 19-229 (274)
489 COG1132 MdlB ABC-type multidru 100.0 1.2E-30 2.5E-35 331.5 15.6 196 865-1088 327-532 (567)
490 cd03254 ABCC_Glucan_exporter_l 100.0 1.5E-30 3.2E-35 292.7 14.6 195 866-1088 2-206 (229)
491 PRK11160 cysteine/glutathione 100.0 2.2E-30 4.8E-35 328.5 18.0 198 865-1089 337-543 (574)
492 cd03248 ABCC_TAP TAP, the Tran 100.0 1.3E-30 2.8E-35 292.5 14.1 202 866-1088 11-217 (226)
493 PRK10247 putative ABC transpor 100.0 6.5E-30 1.4E-34 286.4 19.5 201 170-417 12-222 (225)
494 PRK10982 galactose/methyl gala 100.0 4.5E-30 9.8E-35 320.4 20.3 190 891-1088 10-203 (491)
495 PRK09544 znuC high-affinity zi 100.0 6.3E-30 1.4E-34 290.6 19.6 184 866-1088 4-190 (251)
496 COG4598 HisP ABC-type histidin 100.0 2.3E-30 5.1E-35 261.4 14.2 208 170-420 11-239 (256)
497 PRK03695 vitamin B12-transport 100.0 6.4E-30 1.4E-34 290.6 19.6 182 894-1088 11-202 (248)
498 CHL00131 ycf16 sulfate ABC tra 100.0 1.5E-29 3.3E-34 288.6 22.8 215 170-420 12-239 (252)
499 PRK14265 phosphate ABC transpo 100.0 9.6E-30 2.1E-34 293.1 21.3 214 168-421 23-257 (274)
500 TIGR02857 CydD thiol reductant 100.0 2.1E-30 4.6E-35 326.8 17.3 196 866-1088 320-525 (529)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.4e-258 Score=2378.53 Aligned_cols=1307 Identities=51% Similarity=0.883 Sum_probs=1214.7
Q ss_pred CChHHHhHHHHhhcCCCCCcccccccccCCCCcccccccCCCChHhhHHHHHHhhcCCCCChHHHHHHHHhHHhhcCCCC
Q 038815 36 DDDEEALKRAALENLPTYNSPFRKMITNSSGEATEADDVSTLGPQARQKLIDKLVREPSVDNEHFLLKLRDRFDAVGIDL 115 (1436)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 115 (1436)
+||||+|+|||+|||||++| +++.+..+. ++|+.++++++++.++++..+..++|+++++.++|+|++++ +.
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~----~~~~~~~~~--~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~ 83 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR----SLLRSIFES--EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--EL 83 (1391)
T ss_pred chhHHHHHHHHHhcCccccc----hhhhhhccC--cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cC
Confidence 45999999999999999998 444432222 59999999999999999999999999999999999999998 89
Q ss_pred CcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhhhhhccccccccccccccccccceeeeceEEEEeCCeEEE
Q 038815 116 PEVEVRYENLNVEAEAFLASKALPTFTNFFTNIIEFIYFLTTCKRLKGSLNSLQILPTRKKHLTILKDVSGIIRPGSMTL 195 (1436)
Q Consensus 116 p~~~v~~~~l~v~~~~~~~~~~~pt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~ 195 (1436)
|.++++++++.|+|++..| ||+.|...+.++ .++...+.. ++...+||+|+||.++||||++
T Consensus 84 p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~------------~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~l 145 (1391)
T KOG0065|consen 84 PTIEVRFSALGVEADVTYG----PTLVNILSNPLE------------SILRMLGKR--KKKKIQILKDISGIIKPGEMTL 145 (1391)
T ss_pred CceEEEeeecccccccccc----hhhhhhhhhHHH------------HHhhhcccc--ccccceeecCcceeEcCCceEE
Confidence 9999999999999999866 999999988877 333222222 4456789999999999999999
Q ss_pred EEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCCCCCCCCHHHHHHhhhhhccCCCccch
Q 038815 196 LLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDNHIGEMTVRETLAFSARCQGVGSRFDM 275 (1436)
Q Consensus 196 llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~ 275 (1436)
++||||||||||||+|+|.++..++..|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|+++++|++
T Consensus 146 vLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~- 224 (1391)
T KOG0065|consen 146 VLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD- 224 (1391)
T ss_pred EecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc-
Confidence 9999999999999999999998878899999999999999999999999999999999999999999999999999987
Q ss_pred hhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccCCCCHHHHHHHhh-----hhh
Q 038815 276 LTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIRGISGGQKRRVTT-----GPA 350 (1436)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~rgLSGGqrkRvsi-----a~a 350 (1436)
+..|+++.. ..+|++++++||+||+||+|||+++||+||||||||+| +++
T Consensus 225 --~~~R~e~~~-----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~ 279 (1391)
T KOG0065|consen 225 --EVSRREKLA-----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPA 279 (1391)
T ss_pred --cccHHHHHH-----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCc
Confidence 666766531 26899999999999999999999999999999999999 677
Q ss_pred hhhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEecChHHHHHHHHhcCCC
Q 038815 351 LALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGLIVYLGPRELVLDFFESMGFK 430 (1436)
Q Consensus 351 ~vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~iv~~G~~~~~~~~F~~lGf~ 430 (1436)
.++||||+|+|||++|+.++++.||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.
T Consensus 280 ~~~~~De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~ 359 (1391)
T KOG0065|consen 280 SILFWDEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFK 359 (1391)
T ss_pred ceeeeecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCcc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHhhcChhhhhhHhhhccccccccCHHHHHHHHHhchhhHHHHHHhcCCCCCCCCCcccccCCcccCCHH
Q 038815 431 CPERKGVADFLQEVTSRKDQQQYWAHKEMRYRFVTVQEFCEAFQSFHVGQKLTAELRTPFDKSKSHPAALSMKEYGVGKK 510 (1436)
Q Consensus 431 cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~ef~~~f~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~ 510 (1436)
||+|+++|||+++++++++++++|..+..|+.+.+++||.+.|.+++.++++..+++.++++++.++.++..++|.+++|
T Consensus 360 cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~ 439 (1391)
T KOG0065|consen 360 CPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYW 439 (1391)
T ss_pred CCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhheeeeccCCCCccCCcchhhHHHHHHHHHHHHHHHHHHHHHHhc
Q 038815 511 ELLKANISREFLLMKRNSFVYIFKLTQLSTVAMVSMSLFFRTKMPKDSVNDGGIYIGASFFAVMMTMFNGMSDISMTIAK 590 (1436)
Q Consensus 511 ~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~gslf~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~~~~~~~~ 590 (1436)
+|++.|+.|++++++||.+++++++++.+++|+++|++|+++++ .+..++..+.|++||++++.+|++++|+++++++
T Consensus 440 ~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~ 517 (1391)
T KOG0065|consen 440 EQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQR 517 (1391)
T ss_pred HHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999885 4556788999999999999999999999999999
Q ss_pred chhhhhhhcCCccchHhHHHHHHHHHhhHHHHHHHHHHhhhhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 038815 591 LPVFYKQRDLRFYPAWSYALPAWIVKIPISFLEVAAWVFLTYYVIGFDPNVGRFFKQYLLLLFVNQMATALFRFIGAAGR 670 (1436)
Q Consensus 591 ~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~ 670 (1436)
+|||+|||+..||||||+++|.+++++|.+++++++|.+|+||++||.+++++||++||+++++++|++++||+++++++
T Consensus 518 ~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~ 597 (1391)
T KOG0065|consen 518 LPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSR 597 (1391)
T ss_pred cchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHhcccccccchhhhHHHhHhhChHHHHHHHHHHHhhcCCcccccc------------CC---
Q 038815 671 NMIVAMSFGSFALLMLFALGGFVLSRDDINKWWIWGYWCSPMMYAQNAIVANEFLGHSWRKFT------------TN--- 735 (1436)
Q Consensus 671 ~~~vA~~~~~~~~l~~~l~~Gf~i~~~~i~~w~~W~~~isP~~ya~~al~~nef~~~~~~~~~------------~~--- 735 (1436)
++.+|+.+|++.++++++++||+||+.+||+||+|++|+||++|++++++.|||++++|.|.. ..
T Consensus 598 t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~ 677 (1391)
T KOG0065|consen 598 TLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAA 677 (1391)
T ss_pred hHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchh
Confidence 999999999999999999999999999999999999999999999999999999999999971 11
Q ss_pred CccchhHHhhcccCcc-----cCCchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceeeecCcccccccccCCCccc
Q 038815 736 SNESLGVQALKSRGFF-----PHAYWYWLGLGAVIGFLLVFNVGFTLSLTFLNKFEKPRAVIFDESESNEKDNRTGGTLQ 810 (1436)
Q Consensus 736 ~~~~~G~~~L~~~~~~-----~~~~~~w~~~g~lig~~v~f~i~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1436)
...+.|.++++.+++. +.++|+|+|+|+++||+++|+++++++++|+++....++++..+....+.......
T Consensus 678 ~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~--- 754 (1391)
T KOG0065|consen 678 TGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAG--- 754 (1391)
T ss_pred hccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhcc---
Confidence 2356899999988887 78899999999999999999999999999999999888876544332221110000
Q ss_pred CCCCCCCCccccCCCCCCCccccccccCCCccchhhHHHhhhhhccCccccCCCceeEEeceeeeeecccchhhcccccC
Q 038815 811 SSTSGSSSSLRTRSGESGDYIWERSSSMSSSVTETAVEIRNLIRKKGMVLPFEPHSLTFDEVVYSVDMPQEMKLQGVHED 890 (1436)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 890 (1436)
.. .. .+ . ........+.++..|+++..++++||.|.+++|-+++.++ +
T Consensus 755 --~~---~~---------------~~-~--------~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~ 802 (1391)
T KOG0065|consen 755 --SS---SE---------------IE-K--------LDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---G 802 (1391)
T ss_pred --cc---cc---------------cc-c--------cccccccccccccCCCccccccccceEEEEeCCccccccc---c
Confidence 00 00 00 0 0000001235677888899999999999999998877666 5
Q ss_pred ceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccccccceEEEeccCCCCCCCCCHH
Q 038815 891 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQETFTRISGYCEQNDIHSPLVTVY 970 (1436)
Q Consensus 891 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~ 970 (1436)
++++|+||||.++||.+|||||+||||||||||+||||+++|.++|+|++||+|+++++|+|.+|||+|+|+|.+.+|||
T Consensus 803 ~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVr 882 (1391)
T KOG0065|consen 803 TRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVR 882 (1391)
T ss_pred ceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchH
Confidence 78999999999999999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred HHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCC-CcceecCCCCCC
Q 038815 971 ESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGL 1049 (1436)
Q Consensus 971 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p-~il~lDEPTsgL 1049 (1436)
|+|.|+|.||+|.+++.++|.++||+|++.|||++++|.+||.|| +|||++|||||+||+||++|| .|||||||||||
T Consensus 883 ESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGL 961 (1391)
T KOG0065|consen 883 ESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGL 961 (1391)
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCc
Confidence 999999999999999999999999999999999999999999999 999999999999999999999 899999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh----------------------------hcCCcccCCCCCC
Q 038815 1050 DARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE----------------------------AIPGVQKIKDGCN 1101 (1436)
Q Consensus 1050 D~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~----------------------------~~~g~~~~~~~~N 1101 (1436)
|+++|..|++++|+++++|+||||||||||++|||.||+ +++|+ +|++..|
T Consensus 962 DsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~-~~~~~~N 1040 (1391)
T KOG0065|consen 962 DSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGV-KCISDEN 1040 (1391)
T ss_pred cHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCc-cCCCCCC
Confidence 999999999999999999999999999999999999999 23444 5777779
Q ss_pred ccchhhhccccchhhhccccHHHHHhhcHHHHHHHHHHHHhcCCCCC-CCCCCCCCccCCcHHHHHHHHHHHHHHHhhcC
Q 038815 1102 PATWMLEVTARSQELALGVDFHNIYKLSDLYRRNKALIEELSKPVPG-SKDIYFPTQYSRSFFMQFMACLWKQHWSYWRN 1180 (1436)
Q Consensus 1102 PAd~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~ 1180 (1436)
||||||||++.+.+...+.||+++|++|++|++++++++++++++++ ..+..++++|++|+|.|++.|+||++++|||+
T Consensus 1041 PA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRs 1120 (1391)
T KOG0065|consen 1041 PAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRS 1120 (1391)
T ss_pred hHHHHHhhcccccccccCccHHHHHhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCC
Confidence 99999999999888888899999999999999999999999999888 77888889999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccCCCCcCChhhHHHHHHHHHHHHHHHHHhhhhhcchhhHHhhHHHHhhhcCCCCChH
Q 038815 1181 PPYNAVRFLFTTAIALTFGTMFWDMGTKVKRNRDLFNAMGSMYTAVFFVGAQYCSSVQPVVAVERAVFYREKGAGMYSGM 1260 (1436)
Q Consensus 1181 ~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~RE~~~~~Y~~~ 1260 (1436)
|+|+++|++++++.||++|++||++|+ ++||+||.+|++|+++++.+..++...+|.+..||.+++||+++|||||.
T Consensus 1121 p~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~ 1197 (1391)
T KOG0065|consen 1121 PDYLMARFALTIVAGLFIGFTFWKVGH---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWT 1197 (1391)
T ss_pred cHHHHHHHHHHHHHHHhheeeeeecCC---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHH
Confidence 999999999999999999999999995 68999999999999999999998888889899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 038815 1261 PYAFAQVMIEIPYLFVLSVVYGVIVYAMIGFEWTAAKFFWYLFFMFFTLLYFTFYGMMTVAMTPNHHIAAIVSTLFYGLW 1340 (1436)
Q Consensus 1261 ~y~la~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~ 1340 (1436)
||++||+++|+||+++++++|++|+|+|+||.+++.+|+||+++++++.+|++++|+|+++++||.++|+++++++++++
T Consensus 1198 ~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~ 1277 (1391)
T KOG0065|consen 1198 PFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFW 1277 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccCCCCccchhhhhhhhchHHHHHHHHHHHhhCCcccccC----------CCCcHHHHHHhhcC----Cccccc
Q 038815 1341 NVFSGFVIPRPRIPEWWRWYYWANPVAWTMYGLFASQFGDVEDKME----------NGETVKQFVRNYFD----FKHEFL 1406 (1436)
Q Consensus 1341 ~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~----------~g~~~~~~~~~~~g----~~~~~~ 1406 (1436)
++||||++|++.||.||+||||+||++|.++|++..++||.+..|. +|+||++|+++++| |.++..
T Consensus 1278 ~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~ 1357 (1391)
T KOG0065|consen 1278 NLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPL 1357 (1391)
T ss_pred HHhcccccccccccceeeeeeecCcHHHHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCc
Confidence 9999999999999999999999999999999999999999998872 56799999999999 999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccccCC
Q 038815 1407 GVVAVVVAAFAVLFGVLFAAGIKRFNFQNR 1436 (1436)
Q Consensus 1407 ~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1436 (1436)
.....+..+|.+++.+++.+++||.|+|||
T Consensus 1358 a~~~c~~c~y~v~~~~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1358 ATTACVYCAYTVADAFLAAFNIKYLNFWRN 1387 (1391)
T ss_pred ceeEEEEeeeehHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999987
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.5e-235 Score=2339.71 Aligned_cols=1401 Identities=58% Similarity=1.015 Sum_probs=1237.1
Q ss_pred CCCCcccccCCCCCCCCCC------CCCCChHHHhHHHHhhcCCCCCcccccccccCC------CC---cccccccCCCC
Q 038815 14 SPSASTWRSTSEGTFPRSP------KEEDDDEEALKRAALENLPTYNSPFRKMITNSS------GE---ATEADDVSTLG 78 (1436)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~ 78 (1436)
+.|+++|.. +++|++.+ +..|||||+|+|||+||||||+| +|++++.+. |+ .+ ++|+++|+
T Consensus 15 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 90 (1470)
T PLN03140 15 SVSRSSRNM--EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSR-LRTSIMKSFVENDVYGNQLLHK-EVDVTKLD 90 (1470)
T ss_pred Hhhhhhhhh--hhhhhccchhccccccccCChHhhhhHHhhhCCchhh-hhhhhhhccccccccccccccc-ccccccCC
Confidence 446667744 68885532 13678999999999999999999 999999642 22 12 59999999
Q ss_pred hHhhHHHHHHhhcCCCCChHHHHHHHHhHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhhhh
Q 038815 79 PQARQKLIDKLVREPSVDNEHFLLKLRDRFDAVGIDLPEVEVRYENLNVEAEAFLASKALPTFTNFFTNIIEFIYFLTTC 158 (1436)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~v~~~~l~v~~~~~~~~~~~pt~~~~~~~~~~~~~~~~~~ 158 (1436)
.++++.+++++++++++|+++|++++++|.|++|+++|++|||||||+|+|++.++++++||++|.+.+.++
T Consensus 91 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~-------- 162 (1470)
T PLN03140 91 GNDRQKFIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAE-------- 162 (1470)
T ss_pred hHHHHHHHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHH--------
Confidence 999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred hccccccccccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCcc
Q 038815 159 KRLKGSLNSLQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQ 238 (1436)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~ 238 (1436)
.+...++...+++.+++||+||||.++|||+++|+||||||||||||+|+|+++++.+++|+|+|||+++++..++
T Consensus 163 ----~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~ 238 (1470)
T PLN03140 163 ----SALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPR 238 (1470)
T ss_pred ----HHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhccc
Confidence 2222112222333567899999999999999999999999999999999999988777899999999998877677
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHH
Q 038815 239 RVAAYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKV 318 (1436)
Q Consensus 239 ~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 318 (1436)
+.++||+|+|.|++++||+|||.|+++|++++.+++++.+.++++++.++.|+.+++.++++...++.+++..++.+++.
T Consensus 239 ~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~ 318 (1470)
T PLN03140 239 KTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKI 318 (1470)
T ss_pred ceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHH
Confidence 88999999999999999999999999999887777766677778887778888888889998888877788889999999
Q ss_pred cCCcccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCh
Q 038815 319 LGLDICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPA 393 (1436)
Q Consensus 319 lgL~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~ 393 (1436)
+||++|+||.|||+++++|||||||||+||+++ ++||||||+|||+.++.++++.|+++++..+.|+|+++|||+
T Consensus 319 lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~ 398 (1470)
T PLN03140 319 LGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPA 398 (1470)
T ss_pred cCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCC
Confidence 999999999999999999999999999997654 699999999999999999999999998866889999999999
Q ss_pred hhHHhhcCeEEEecCCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHHhhcChhhhhhHhhhccccccccCHHHHHHHH
Q 038815 394 PETYDLFDDIILLSDGLIVYLGPRELVLDFFESMGFKCPERKGVADFLQEVTSRKDQQQYWAHKEMRYRFVTVQEFCEAF 473 (1436)
Q Consensus 394 ~~~~~lfD~vilL~~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~ef~~~f 473 (1436)
++++++||+|++|++|+++|+||++++.+||+++||+||+++|+|||+++++++++++++|.....|++++++++|+++|
T Consensus 399 ~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~ 478 (1470)
T PLN03140 399 PETFDLFDDIILLSEGQIVYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERF 478 (1470)
T ss_pred HHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998888887777788888999999999
Q ss_pred HhchhhHHHHHHhcCCCCCCCCCcccccCCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhheeeecc
Q 038815 474 QSFHVGQKLTAELRTPFDKSKSHPAALSMKEYGVGKKELLKANISREFLLMKRNSFVYIFKLTQLSTVAMVSMSLFFRTK 553 (1436)
Q Consensus 474 ~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~gslf~~~~ 553 (1436)
++++.++++.++++.|.+++..++.....++|..++++|++.|++|++++++||+..+++++++.+++|+++|++||+++
T Consensus 479 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~ 558 (1470)
T PLN03140 479 KSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTE 558 (1470)
T ss_pred HhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999888888777666666666667789999999999999999999999999999999999999999999999887
Q ss_pred CCCCccCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhcCCccchHhHHHHHHHHHhhHHHHHHHHHHhhhhh
Q 038815 554 MPKDSVNDGGIYIGASFFAVMMTMFNGMSDISMTIAKLPVFYKQRDLRFYPAWSYALPAWIVKIPISFLEVAAWVFLTYY 633 (1436)
Q Consensus 554 ~~~~~~~~~~~~~g~lff~~l~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~ 633 (1436)
++.....++..+.|++||++++++++++++++.++.+||||+|||+.+||++|+|++|++++++|+.++++++|++++||
T Consensus 559 ~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~ 638 (1470)
T PLN03140 559 MHTRNEEDGALYIGALLFSMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYY 638 (1470)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhh
Confidence 66544456778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccchhhhHHHhHhhChHH
Q 038815 634 VIGFDPNVGRFFKQYLLLLFVNQMATALFRFIGAAGRNMIVAMSFGSFALLMLFALGGFVLSRDDINKWWIWGYWCSPMM 713 (1436)
Q Consensus 634 ~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~i~~w~~W~~~isP~~ 713 (1436)
|+||++++++||.|+++++++++++.++|++++++++++.+|+.+++++++++++|+||++++++||+||+|++|+||+.
T Consensus 639 m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~ 718 (1470)
T PLN03140 639 SIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLS 718 (1470)
T ss_pred hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCccccc-cCCCccchhHHhhcccCcccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceee
Q 038815 714 YAQNAIVANEFLGHSWRKF-TTNSNESLGVQALKSRGFFPHAYWYWLGLGAVIGFLLVFNVGFTLSLTFLNKFEKPRAVI 792 (1436)
Q Consensus 714 ya~~al~~nef~~~~~~~~-~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~lig~~v~f~i~~~~~L~~~~~~~~~~~~~ 792 (1436)
|+++|+++|||.+..|.+. +.+...+.|+++|+.+++..++.|+|++++++++|+++|+++++++|+|+++....+..+
T Consensus 719 Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~ 798 (1470)
T PLN03140 719 YGFNALAVNEMFAPRWMNKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAII 798 (1470)
T ss_pred HHHHHHHHHhccCccccCcccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccc
Confidence 9999999999999888643 233356789999999999988999999999999999999999999999999766655554
Q ss_pred ecCcccccccccCCC-cccCCCCCCCCccccCCCCCCCccccccccCCCccchhhHHHhhhhhccCccccCCCceeEEec
Q 038815 793 FDESESNEKDNRTGG-TLQSSTSGSSSSLRTRSGESGDYIWERSSSMSSSVTETAVEIRNLIRKKGMVLPFEPHSLTFDE 871 (1436)
Q Consensus 793 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 871 (1436)
.++............ .....+.......... ..+........... ...........+.++.+|+.+..++|+|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (1470)
T PLN03140 799 SEETAEEMEGEEDSIPRSLSSADGNNTREVAI--QRMSNPEGLSKNRD----SSLEAANGVAPKRGMVLPFTPLAMSFDD 872 (1470)
T ss_pred cccchhhhhccccccccccccccccccccccc--cccccccccccccc----cccccccccccccccccCCCcceEEEEE
Confidence 221111000000000 0000000000000000 00000000000000 0000000112234566788899999999
Q ss_pred eeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccccccc
Q 038815 872 VVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQETFT 951 (1436)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~~~~ 951 (1436)
++|+++.+.+.+..+...+++.+|+|||+.++||+++|||||||||||||||+|+|+.++|..+|+|.+||.+.++..++
T Consensus 873 v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~ 952 (1470)
T PLN03140 873 VNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFA 952 (1470)
T ss_pred EEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhh
Confidence 99999988765555555566789999999999999999999999999999999999987777899999999876555567
Q ss_pred ceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHH
Q 038815 952 RISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAV 1031 (1436)
Q Consensus 952 ~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~ 1031 (1436)
+.+|||+|+|.|++.+||+|+|.|++.+|.|.+.+.+++.++++++++.+||.+++|+.+|.+++++|||||||||+||+
T Consensus 953 ~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~ 1032 (1470)
T PLN03140 953 RISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAV 1032 (1470)
T ss_pred hheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHH
Confidence 88999999999999999999999999998877667777788899999999999999999999888999999999999999
Q ss_pred HHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh-----------------------
Q 038815 1032 ELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE----------------------- 1088 (1436)
Q Consensus 1032 ~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~----------------------- 1088 (1436)
||+++|+||||||||||||+.++..+++.|++++++|+|||||+|||+.++++.||+
T Consensus 1033 aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~ 1112 (1470)
T PLN03140 1033 ELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKI 1112 (1470)
T ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccH
Confidence 999999999999999999999999999999999989999999999999999999998
Q ss_pred -----hcCCcccCCCCCCccchhhhccccchhhhccccHHHHHhhcHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcHH
Q 038815 1089 -----AIPGVQKIKDGCNPATWMLEVTARSQELALGVDFHNIYKLSDLYRRNKALIEELSKPVPGSKDIYFPTQYSRSFF 1163 (1436)
Q Consensus 1089 -----~~~g~~~~~~~~NPAd~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 1163 (1436)
.++|+++||+++||||||||+++.+.+...+.||++.|++|+++++++++++++..+.++.++..++++|++|+|
T Consensus 1113 ~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 1192 (1470)
T PLN03140 1113 IEYFEAIPGVPKIKEKYNPATWMLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTW 1192 (1470)
T ss_pred HHHHHhcCCCCCCCCCCCchhhhhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHH
Confidence 113556799999999999999987666556679999999999999998888888776666555556778999999
Q ss_pred HHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCCcCChhhHHHHHHHHHHHHHHHHHhhhhhcchhhHH
Q 038815 1164 MQFMACLWKQHWSYWRNPPYNAVRFLFTTAIALTFGTMFWDMGTKVKRNRDLFNAMGSMYTAVFFVGAQYCSSVQPVVAV 1243 (1436)
Q Consensus 1164 ~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~ 1243 (1436)
+|+++|+||+++++||||.|+.+|+++++++||++|++||+++++..+++++++++|++|++++|+++.++++++|.+..
T Consensus 1193 ~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~ 1272 (1470)
T PLN03140 1193 GQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAV 1272 (1470)
T ss_pred HHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998877789999999999999999999999999999999
Q ss_pred hhHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 038815 1244 ERAVFYREKGAGMYSGMPYAFAQVMIEIPYLFVLSVVYGVIVYAMIGFEWTAAKFFWYLFFMFFTLLYFTFYGMMTVAMT 1323 (1436)
Q Consensus 1244 er~vf~RE~~~~~Y~~~~y~la~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~ 1323 (1436)
||+||+|||++|+|++.+|++|++++|+|+.++++++|++|+|||+||++++.+||||+++++++.++++++|+++++++
T Consensus 1273 eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~ 1352 (1470)
T PLN03140 1273 ERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLT 1352 (1470)
T ss_pred HHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhhcccccCCCCccchhhhhhhhchHHHHHHHHHHHhhCCcccccC-C----CCcHHHHHHhh
Q 038815 1324 PNHHIAAIVSTLFYGLWNVFSGFVIPRPRIPEWWRWYYWANPVAWTMYGLFASQFGDVEDKME-N----GETVKQFVRNY 1398 (1436)
Q Consensus 1324 p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~-~----g~~~~~~~~~~ 1398 (1436)
||.++|+++++++++++++||||++|+++||+||+|+||+||++|+++|+++|||+|.+..|+ + ++++++|++++
T Consensus 1353 p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1432 (1470)
T PLN03140 1353 PNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDH 1432 (1470)
T ss_pred CcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999887653 2 36899999999
Q ss_pred cCCccccchhHHHHHHHHHHHHHHHHHHHHHhccccCC
Q 038815 1399 FDFKHEFLGVVAVVVAAFAVLFGVLFAAGIKRFNFQNR 1436 (1436)
Q Consensus 1399 ~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1436 (1436)
|||+++++|++++++++|+++|++++++++|++|||||
T Consensus 1433 ~g~~~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~q~r 1470 (1470)
T PLN03140 1433 YGYDPDFMGPVAAVLVGFTVFFAFIFAFCIRTLNFQTR 1470 (1470)
T ss_pred cCcCcccccchhhhHHHHHHHHHHHHHHHHHHhhcccC
Confidence 99999999999999999999999999999999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=6e-187 Score=1879.61 Aligned_cols=1258 Identities=30% Similarity=0.523 Sum_probs=1038.5
Q ss_pred CCChHHHHHHHHhHHhhcCCCCC--cceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhhhhhcccccccccccc
Q 038815 94 SVDNEHFLLKLRDRFDAVGIDLP--EVEVRYENLNVEAEAFLASKALPTFTNFFTNIIEFIYFLTTCKRLKGSLNSLQIL 171 (1436)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~g~~~p--~~~v~~~~l~v~~~~~~~~~~~pt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (1436)
++|+++|++.++++.++.+...| +++|+||||+|++. ..+...+||+.|.+.+... .....+. .
T Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~-~~~~~~~~t~~~~~~~~~~------------~~~~~~~-~ 67 (1394)
T TIGR00956 2 EFNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYGV-AADSDYQPTFPNALLKILT------------RGFRKLK-K 67 (1394)
T ss_pred CCCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEEE-eccccccCchHHHHHHHHH------------HHHHHhc-c
Confidence 57899999886666666665544 99999999999994 3366678999999887654 1111110 0
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcccEEEEcCccCCCCC--ccceEEEEcCCC
Q 038815 172 PTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSL-KVSGRVTYNGHNMDEFE--PQRVAAYISQHD 248 (1436)
Q Consensus 172 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~-~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d 248 (1436)
++++++++||+|||+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.|||+++++.. .++.++||+|+|
T Consensus 68 ~~~~~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d 147 (1394)
T TIGR00956 68 FRDTKTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETD 147 (1394)
T ss_pred cCCCCcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEecccc
Confidence 223456789999999999999999999999999999999999974321 25999999999875432 245699999999
Q ss_pred CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccc
Q 038815 249 NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTL 328 (1436)
Q Consensus 249 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 328 (1436)
.|++++||+|||.|+++++.+..+.+ ...+.+ ..+...+.+++.+||++++||.
T Consensus 148 ~~~~~lTV~E~l~f~~~~~~~~~~~~---~~~~~~-----------------------~~~~~~~~~l~~lgL~~~~~t~ 201 (1394)
T TIGR00956 148 VHFPHLTVGETLDFAARCKTPQNRPD---GVSREE-----------------------YAKHIADVYMATYGLSHTRNTK 201 (1394)
T ss_pred ccCCCCCHHHHHHHHHHhCCCCCCCC---CCCHHH-----------------------HHHHHHHHHHHHcCcccccCce
Confidence 99999999999999988764321100 001111 0122346789999999999999
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
||++.+++|||||||||+||+++ ++||||||+|||+.++.++++.|+++++..+.|+|+++|||+++++++||+|
T Consensus 202 vg~~~~~~LSGGerkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v 281 (1394)
T TIGR00956 202 VGNDFVRGVSGGERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKV 281 (1394)
T ss_pred eCCCcCCCCCcccchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceE
Confidence 99999999999999999997665 5999999999999999999999999987667899999999999999999999
Q ss_pred EEecCCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHHhhcChhhhhhHhhhccccccccCHHHHHHHHHhchhhHHHH
Q 038815 404 ILLSDGLIVYLGPRELVLDFFESMGFKCPERKGVADFLQEVTSRKDQQQYWAHKEMRYRFVTVQEFCEAFQSFHVGQKLT 483 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~ef~~~f~~s~~~~~~~ 483 (1436)
++|++|+++|+|+++++.+||+++||+||++.|+|||++++++++++ +++...+. ....++++++++|++|+.++++.
T Consensus 282 ~~L~~G~iv~~G~~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~e~-~~~~~~~~~~~~~~~s~~~~~~~ 359 (1394)
T TIGR00956 282 IVLYEGYQIYFGPADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGYEK-KVPRTPQEFETYWRNSPEYAQLM 359 (1394)
T ss_pred EEEeCCeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccccc-cCCCCHHHHHHHHHcCHHHHHHH
Confidence 99999999999999999999999999999999999999999987653 33322111 12367899999999999888777
Q ss_pred HHhcCCCCCC---------------CCCcccccCCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhhe
Q 038815 484 AELRTPFDKS---------------KSHPAALSMKEYGVGKKELLKANISREFLLMKRNSFVYIFKLTQLSTVAMVSMSL 548 (1436)
Q Consensus 484 ~~l~~~~~~~---------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~gsl 548 (1436)
++++.+.++. +..+.....++|..+++.|++.|++|+++.++||+..++.++++.+++|+++|++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~ 439 (1394)
T TIGR00956 360 KEIDEYLDRCSESDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSV 439 (1394)
T ss_pred HHHHHHhhhccchhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 6655322110 0011122345688999999999999999999999999999999999999999999
Q ss_pred eeeccCCCCccCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhcCCccchHhHHHHHHHHHhhHHHHHHHHHH
Q 038815 549 FFRTKMPKDSVNDGGIYIGASFFAVMMTMFNGMSDISMTIAKLPVFYKQRDLRFYPAWSYALPAWIVKIPISFLEVAAWV 628 (1436)
Q Consensus 549 f~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~ 628 (1436)
||+.+. + ..+.+.+.|++||++++.++.+++++..++.+|++|+|||..++|++++|++|++++++|+.++.+++|+
T Consensus 440 F~~~~~--~-~~~~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~ 516 (1394)
T TIGR00956 440 FYNLPK--N-TSDFYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFN 516 (1394)
T ss_pred hcCCCC--C-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 996543 2 2456778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccchhhhHHHhHh
Q 038815 629 FLTYYVIGFDPNVGRFFKQYLLLLFVNQMATALFRFIGAAGRNMIVAMSFGSFALLMLFALGGFVLSRDDINKWWIWGYW 708 (1436)
Q Consensus 629 ~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~i~~w~~W~~~ 708 (1436)
+++|||+||.+++++||.|+++++++++++.+++++++++++++.+|+.+++++++++++++||++++++||+||+|++|
T Consensus 517 ~i~Yfm~gl~~~~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~y 596 (1394)
T TIGR00956 517 IILYFMVNFRRTAGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYY 596 (1394)
T ss_pred hhhEEcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hChHHHHHHHHHHHhhcCCcccccc--C----------------------CCccchhHHhhcccCcccCCchhHHHHHHH
Q 038815 709 CSPMMYAQNAIVANEFLGHSWRKFT--T----------------------NSNESLGVQALKSRGFFPHAYWYWLGLGAV 764 (1436)
Q Consensus 709 isP~~ya~~al~~nef~~~~~~~~~--~----------------------~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l 764 (1436)
+||+.|++++++.|||.+..+.|.. | +...+.|+++|+. ++.....|+|+|++++
T Consensus 597 isp~~yafeal~~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil 675 (1394)
T TIGR00956 597 VNPLAYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGII 675 (1394)
T ss_pred cCHHHHHHHHHHHhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHH
Confidence 9999999999999999999998841 1 1124588999985 4444567999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCceee-ecCcccccccccCCCcccCCCCCCCCccccCCCCCCCccccccccCCCccc
Q 038815 765 IGFLLVFNVGFTLSLTFLNKFEKPRAVI-FDESESNEKDNRTGGTLQSSTSGSSSSLRTRSGESGDYIWERSSSMSSSVT 843 (1436)
Q Consensus 765 ig~~v~f~i~~~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (1436)
++|+++|.++++++++|.++.......+ .++.......... . ..+ .. .. . .++.......
T Consensus 676 ~~~~v~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~----~~--~~--~-----~e~~~~~~~~-- 736 (1394)
T TIGR00956 676 IGFTVFFFFVYILLTEFNKGAKQKGEILVFRRGSLKRAKKAG-E---TSA----SN--KN--D-----IEAGEVLGST-- 736 (1394)
T ss_pred HHHHHHHHHHHHHHHHhccccCCCCceEeeccccccchhhcc-c---ccc----cc--cc--c-----ccccccCCCC--
Confidence 9999999999999999998655544332 2221110000000 0 000 00 00 0 0000000000
Q ss_pred hhhHHHhhhhhccCccccCCCceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHH
Q 038815 844 ETAVEIRNLIRKKGMVLPFEPHSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMD 923 (1436)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~ 923 (1436)
....+............+.....++|+|++|.++.+ .+++.+|+|||+.++|||++|||||||||||||||
T Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~l~~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~ 807 (1394)
T TIGR00956 737 DLTDESDDVNDEKDMEKESGEDIFHWRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLN 807 (1394)
T ss_pred ccccccccccccccccccCCCceEEEEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHH
Confidence 000000000000000000112357999999987532 12467999999999999999999999999999999
Q ss_pred HHHCCCCCC-eeEEEEEEcCeecccccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcC
Q 038815 924 VLAGRKTGG-YITGSITISGYLKKQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVE 1002 (1436)
Q Consensus 924 ~Lag~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~ 1002 (1436)
+|+|+.+.| +.+|+|.+||.+.. ..+++.+|||+|+|.+++.+||+|+|.|++.+|.|.+.+.+++.++++++++.++
T Consensus 808 ~Lag~~~~g~~~~G~I~i~G~~~~-~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~ 886 (1394)
T TIGR00956 808 VLAERVTTGVITGGDRLVNGRPLD-SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLE 886 (1394)
T ss_pred HHhCCCCCCCcceeEEEECCEECC-hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcC
Confidence 999997654 45699999998874 3567889999999999999999999999999998776677778889999999999
Q ss_pred CCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCC-cceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHH
Q 038815 1003 LNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSID 1081 (1436)
Q Consensus 1003 L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~-il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~ 1081 (1436)
|.+++|+.+|.++. +|||||||||+||+||+.+|+ ||||||||||||+.++..|++.|++++++|+|||||+|||+..
T Consensus 887 L~~~~d~~v~~~~~-~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~ 965 (1394)
T TIGR00956 887 MESYADAVVGVPGE-GLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAI 965 (1394)
T ss_pred ChhhCCCeeCCCCC-CCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHH
Confidence 99999999997654 899999999999999999997 9999999999999999999999999998899999999999999
Q ss_pred HHHHhhh---------------------------hcCCcccCCCCCCccchhhhccccchhhhccccHHHHHhhcHHHHH
Q 038815 1082 IFESFDE---------------------------AIPGVQKIKDGCNPATWMLEVTARSQELALGVDFHNIYKLSDLYRR 1134 (1436)
Q Consensus 1082 if~~FD~---------------------------~~~g~~~~~~~~NPAd~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~ 1134 (1436)
+++.||+ ...|.++||+++|||||+||+++.+.+.....||.+.|++|++++.
T Consensus 966 ~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~ 1045 (1394)
T TIGR00956 966 LFEEFDRLLLLQKGGQTVYFGDLGENSHTIINYFEKHGAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQA 1045 (1394)
T ss_pred HHHhcCEEEEEcCCCEEEEECCcccccchHHHHHHhcCCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHH
Confidence 9999998 1134457999999999999999865544445689999999999988
Q ss_pred HHHHHHHhcCCCCCCC---CCCCCCccCCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCCcCC
Q 038815 1135 NKALIEELSKPVPGSK---DIYFPTQYSRSFFMQFMACLWKQHWSYWRNPPYNAVRFLFTTAIALTFGTMFWDMGTKVKR 1211 (1436)
Q Consensus 1135 ~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~ 1211 (1436)
..+.++++..+..... +....++|+.|+|+|+++|++|+++++||||.|+.+|+++++++|+++|++||++++ +
T Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~ 1122 (1394)
T TIGR00956 1046 VKNELDRLEAELSKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---S 1122 (1394)
T ss_pred HHHHHHHhhcccccCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---C
Confidence 7766665543322111 111224689999999999999999999999999999999999999999999999986 5
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhcchhhHHhhHHH-HhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccC
Q 038815 1212 NRDLFNAMGSMYTAVFFVGAQYCSSVQPVVAVERAVF-YREKGAGMYSGMPYAFAQVMIEIPYLFVLSVVYGVIVYAMIG 1290 (1436)
Q Consensus 1212 ~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf-~RE~~~~~Y~~~~y~la~~l~eiP~~~~~~~~~~~i~Y~~~g 1290 (1436)
+++++|++|++|+++++.++. +++++|.|..||.+| +||+++|+|++.+|++|++++|+|+.++++++|++|+|||+|
T Consensus 1123 ~~~i~~~~g~~f~~~~~~~~~-~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~G 1201 (1394)
T TIGR00956 1123 LQGLQNQMFAVFMATVLFNPL-IQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVG 1201 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeeccc
Confidence 789999999999988887776 456678888888886 899999999999999999999999999999999999999999
Q ss_pred cccchhH-------HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCCCccchhhhhhhh
Q 038815 1291 FEWTAAK-------FFWYLFFMFFTLLYFTFYGMMTVAMTPNHHIAAIVSTLFYGLWNVFSGFVIPRPRIPEWWRWYYWA 1363 (1436)
Q Consensus 1291 ~~~~~~~-------f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~i 1363 (1436)
|++++.+ |++|+++++++.++++++|+++++++||.++|+.+++++++++++||||++|+++||.||+|+||+
T Consensus 1202 l~~~~~~~~~~~~~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~ 1281 (1394)
T TIGR00956 1202 FYWNASKTGQVHERGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRC 1281 (1394)
T ss_pred ccCcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhc
Confidence 9988766 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhhCCcccccC----------CCCcHHHHHH-------------------------------hhcCCc
Q 038815 1364 NPVAWTMYGLFASQFGDVEDKME----------NGETVKQFVR-------------------------------NYFDFK 1402 (1436)
Q Consensus 1364 sp~~y~~~~l~~~~~~~~~~~~~----------~g~~~~~~~~-------------------------------~~~g~~ 1402 (1436)
||++|+++|++.|||+|.+..|+ +|+||++|+. ..+|++
T Consensus 1282 sp~~y~~~~l~~~~~~~~~~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~ 1361 (1394)
T TIGR00956 1282 SPFTYLVQALLSTGLADVPVTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSK 1361 (1394)
T ss_pred CHHHHHHHHHHHHHcCCCeeecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCc
Confidence 99999999999999999987772 3567765532 356888
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 038815 1403 HEFLGVVAVVVAAFAVLFGVLFAAGIKRFN 1432 (1436)
Q Consensus 1403 ~~~~~~~~~il~~~~~~f~~~~~~~l~~~~ 1432 (1436)
+++.|+|++++++|++++ +++++++.++.
T Consensus 1362 ~~~~w~~~~i~~~~~~~~-~~~~~~l~~~~ 1390 (1394)
T TIGR00956 1362 YSGRWRNFGIFIAFIFFN-IIATVFFYWLA 1390 (1394)
T ss_pred ccccccchhhhhHHHHHH-HHHHHhhheEE
Confidence 899999999999999988 77788887763
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.2e-93 Score=893.39 Aligned_cols=554 Identities=32% Similarity=0.548 Sum_probs=483.1
Q ss_pred CCceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEEc
Q 038815 863 EPHSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGSITIS 941 (1436)
Q Consensus 863 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~-~~~G~i~i~ 941 (1436)
.+..+.|+|+++..+.+.. ..+++|+||||.++|||++|||||||||||||||+|+||..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3567899999998765421 3478999999999999999999999999999999999998764 789999999
Q ss_pred CeecccccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 942 GYLKKQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 942 g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
|++...+.+++.+|||+|+|.+.|++||+|+|.|+|.+|+|.+.+.++|+++|+++++.|||.+|+|+++|+++.+|+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhh---------c--
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEA---------I-- 1090 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~---------~-- 1090 (1436)
||||||+||.||+.||+||||||||||||+.+|.+++++||++|++|+|||||+||||+++|++||+. .
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G 253 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSEGEVVYSG 253 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999991 1
Q ss_pred -----------CCcccCCCCCCccchhhhccccc-hhhhccccHHHHHhhc------HHHHHHHHHHHHhcCCCCCCCCC
Q 038815 1091 -----------PGVQKIKDGCNPATWMLEVTARS-QELALGVDFHNIYKLS------DLYRRNKALIEELSKPVPGSKDI 1152 (1436)
Q Consensus 1091 -----------~g~~~~~~~~NPAd~~l~v~~~~-~~~~~~~d~~~~~~~s------~~~~~~~~~~~~~~~~~~~~~~~ 1152 (1436)
.|. +||+++|||||++|+++.. ... .-.+..+.++.- +...+... .........+.
T Consensus 254 ~~~~~~~ff~~~G~-~~P~~~Npadf~l~l~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~- 327 (613)
T KOG0061|consen 254 SPRELLEFFSSLGF-PCPELENPADFLLDLLSVDSGTR-ELEEAVRIAKLINKFSQTDNLKKTLE---ALEKSLSTSKK- 327 (613)
T ss_pred CHHHHHHHHHhCCC-CCCCcCChHHHHHHHHccCCCch-hHHhHHHHHHHhhhccccchhhhhHH---HHhhhcccccc-
Confidence 233 4999999999999998842 110 001111111111 11111100 01111001111
Q ss_pred CCCCccCCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCCcCChhhHHHHHHHHHHHHHHHHHh
Q 038815 1153 YFPTQYSRSFFMQFMACLWKQHWSYWRNPPYNAVRFLFTTAIALTFGTMFWDMGTKVKRNRDLFNAMGSMYTAVFFVGAQ 1232 (1436)
Q Consensus 1153 ~~~~~~~~s~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~ 1232 (1436)
.+.....+||.|+..+++|.+++.+|||.+...|+++.+++|+++|++||++++ +..+++++.|++|+.+.++.+.
T Consensus 328 -~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~~~~~~f~ 403 (613)
T KOG0061|consen 328 -VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFILSFMTFL 403 (613)
T ss_pred -cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHHHHHHHHH
Confidence 111127899999999999999999999999999999999999999999999976 4567789999999999999898
Q ss_pred hhhhcchhhHHhhHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchhHHHHHHHHHHHHHHHH
Q 038815 1233 YCSSVQPVVAVERAVFYREKGAGMYSGMPYAFAQVMIEIPYLFVLSVVYGVIVYAMIGFEWTAAKFFWYLFFMFFTLLYF 1312 (1436)
Q Consensus 1233 ~~~~~~~~~~~er~vf~RE~~~~~Y~~~~y~la~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~ 1312 (1436)
.+...++.|+.||++|.||+.+|+|+.++|++|++++|+|+.++.+++|.+|+|||+|++++..+|++|++++++..+.+
T Consensus 404 ~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a 483 (613)
T KOG0061|consen 404 SMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVA 483 (613)
T ss_pred HHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCCCccchhhhhhhhchHHHHHHHHHHHhhCCcccccC-C----
Q 038815 1313 TFYGMMTVAMTPNHHIAAIVSTLFYGLWNVFSGFVIPRPRIPEWWRWYYWANPVAWTMYGLFASQFGDVEDKME-N---- 1387 (1436)
Q Consensus 1313 ~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~-~---- 1387 (1436)
.++|++++++.||...|..+++++...+++|+||+++.++||.||+|++|+|+++|++||++.|||++....|. .
T Consensus 484 ~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~ 563 (613)
T KOG0061|consen 484 ESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLC 563 (613)
T ss_pred HHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999997333332 1
Q ss_pred -CCcHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHhccccC
Q 038815 1388 -GETVKQFVRNYFDFKHEFLGVVAVVVAAFAVLFGVLFAAGIKRFNFQN 1435 (1436)
Q Consensus 1388 -g~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~ 1435 (1436)
..+..+++ ...+++.++.|.++.++++|+++|++++++++++....+
T Consensus 564 ~~~~~~~~l-~~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~ 611 (613)
T KOG0061|consen 564 CESTGEDVL-KQLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRK 611 (613)
T ss_pred ccccHHHHH-HhcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 12445544 568999999999999999999999999999999865544
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=2.2e-91 Score=888.00 Aligned_cols=542 Identities=29% Similarity=0.469 Sum_probs=479.9
Q ss_pred ceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEEcCeecccccccceEEEeccCCCCCCCCCH
Q 038815 891 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGSITISGYLKKQETFTRISGYCEQNDIHSPLVTV 969 (1436)
Q Consensus 891 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv 969 (1436)
++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 467999999999999999999999999999999999987643 4689999999987656678889999999999999999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC-CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCC
Q 038815 970 YESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1048 (1436)
Q Consensus 970 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~-~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsg 1048 (1436)
+|||.|++.++.|...+.+++++.++++++.+||.+++|+.+|.++ .++|||||||||+||+||+++|++|||||||||
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsg 196 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSG 196 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcc
Confidence 9999999999988777778888899999999999999999999864 679999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhhc----------------------CCcccCCCCCCccchh
Q 038815 1049 LDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEAI----------------------PGVQKIKDGCNPATWM 1106 (1436)
Q Consensus 1049 LD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~~----------------------~g~~~~~~~~NPAd~~ 1106 (1436)
||+.++..+++.|++++++|+|||+++|||+.++++.||+.+ .|. +||++.|||||+
T Consensus 197 LD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~~~f~~~g~-~~p~~~n~ad~~ 275 (617)
T TIGR00955 197 LDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAVPFFSDLGH-PCPENYNPADFY 275 (617)
T ss_pred hhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHHHHHHHcCC-CCCCCCChHHHH
Confidence 999999999999999998899999999999999999999911 122 599999999999
Q ss_pred hhccccchhhh-----ccccHHHHHhhcHHHHHHHHHHHHhcCCCC---CCCCCCCCCccCCcHHHHHHHHHHHHHHHhh
Q 038815 1107 LEVTARSQELA-----LGVDFHNIYKLSDLYRRNKALIEELSKPVP---GSKDIYFPTQYSRSFFMQFMACLWKQHWSYW 1178 (1436)
Q Consensus 1107 l~v~~~~~~~~-----~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~ 1178 (1436)
+|+++...+.. ...++.+.|++|+.+++..+..+....+.+ ........++|..+++.|++.|++|+++++|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~ 355 (617)
T TIGR00955 276 VQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVL 355 (617)
T ss_pred HHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHHHHHHHh
Confidence 99987543221 113466777777776655544332211111 1111112346789999999999999999999
Q ss_pred cChhHHHHHHHHHHHHHHHHHHhhccCCCCcCChhhHHHHHHHHHHHHHHHHHhhhhhcchhhHHhhHHHHhhhcCCCCC
Q 038815 1179 RNPPYNAVRFLFTTAIALTFGTMFWDMGTKVKRNRDLFNAMGSMYTAVFFVGAQYCSSVQPVVAVERAVFYREKGAGMYS 1258 (1436)
Q Consensus 1179 R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~RE~~~~~Y~ 1258 (1436)
|||.+..+|+++++++|+++|++||++++ ++++++++.|++|++++++++.++....+.++.||++|+||+.+|+|+
T Consensus 356 R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~ 432 (617)
T TIGR00955 356 RDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYR 432 (617)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccC
Confidence 99999999999999999999999999986 467899999999999999999888888899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 038815 1259 GMPYAFAQVMIEIPYLFVLSVVYGVIVYAMIGFEWTAAKFFWYLFFMFFTLLYFTFYGMMTVAMTPNHHIAAIVSTLFYG 1338 (1436)
Q Consensus 1259 ~~~y~la~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~ 1338 (1436)
+.+|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|+++++++.++++++|+++++++|+..+|+.++++++.
T Consensus 433 ~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~ 512 (617)
T TIGR00955 433 VSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVI 512 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccCCCCccchhhhhhhhchHHHHHHHHHHHhhCCccc-ccCCC---CcH---HHHHHhhcCCccccchhHHH
Q 038815 1339 LWNVFSGFVIPRPRIPEWWRWYYWANPVAWTMYGLFASQFGDVED-KMENG---ETV---KQFVRNYFDFKHEFLGVVAV 1411 (1436)
Q Consensus 1339 ~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~-~~~~g---~~~---~~~~~~~~g~~~~~~~~~~~ 1411 (1436)
++++|+||+++.++||+||+|++|+||++|+++|++.|||++.+. +|+++ ..| ++++++.||++.++.|.+++
T Consensus 513 ~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~~~~~~~~ 592 (617)
T TIGR00955 513 PFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSGEVILETLSFRNADLYLDLI 592 (617)
T ss_pred HHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcChHHHHHhcCCCcccHHHHHH
Confidence 999999999999999999999999999999999999999998764 56321 112 46677889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccccCC
Q 038815 1412 VVAAFAVLFGVLFAAGIKRFNFQNR 1436 (1436)
Q Consensus 1412 il~~~~~~f~~~~~~~l~~~~~~~r 1436 (1436)
++++|+++|+++++++|++....+|
T Consensus 593 il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 593 GLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999998776665
No 6
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=8e-91 Score=881.00 Aligned_cols=557 Identities=25% Similarity=0.404 Sum_probs=465.4
Q ss_pred CceeEEeceeeeeecccc----------------hhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHC
Q 038815 864 PHSLTFDEVVYSVDMPQE----------------MKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAG 927 (1436)
Q Consensus 864 ~~~l~~~~~~~~~~~~~~----------------~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag 927 (1436)
+..+.|.|+.|.+..... .+...+..+++.+|+|||+.++|||++||+|||||||||||++|+|
T Consensus 37 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG 116 (659)
T PLN03211 37 PITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAG 116 (659)
T ss_pred ceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhC
Confidence 578999999999875421 0011122345789999999999999999999999999999999999
Q ss_pred CCCCCeeEEEEEEcCeecccccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCccc
Q 038815 928 RKTGGYITGSITISGYLKKQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLR 1007 (1436)
Q Consensus 928 ~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~ 1007 (1436)
+.+++..+|+|.+||.+... ..++.+|||+|+|.+++.+||+|++.|++.++.+...+.+++.++++++++.+||.+++
T Consensus 117 ~~~~~~~sG~I~inG~~~~~-~~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~ 195 (659)
T PLN03211 117 RIQGNNFTGTILANNRKPTK-QILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKCE 195 (659)
T ss_pred CCCCCceeEEEEECCEECch-hhccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhc
Confidence 87654468999999987643 33466899999999999999999999998888776566667778899999999999999
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhh
Q 038815 1008 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFD 1087 (1436)
Q Consensus 1008 ~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD 1087 (1436)
|+.+|+...++|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+|+|||+.++++.||
T Consensus 196 ~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D 275 (659)
T PLN03211 196 NTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFD 275 (659)
T ss_pred CceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhc
Confidence 99999887899999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred hhc----------------------CCcccCCCCCCccchhhhccccchhhh------c---cccHHHHHhhcHHHHHHH
Q 038815 1088 EAI----------------------PGVQKIKDGCNPATWMLEVTARSQELA------L---GVDFHNIYKLSDLYRRNK 1136 (1436)
Q Consensus 1088 ~~~----------------------~g~~~~~~~~NPAd~~l~v~~~~~~~~------~---~~d~~~~~~~s~~~~~~~ 1136 (1436)
+.+ -|. +||+++|||||++|+++...+.. . ..+..+.|+++. .++..
T Consensus 276 ~iilL~~G~iv~~G~~~~~~~~f~~~G~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~ 353 (659)
T PLN03211 276 SVLVLSEGRCLFFGKGSDAMAYFESVGF-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTLL-APKVK 353 (659)
T ss_pred eEEEecCCcEEEECCHHHHHHHHHHCCC-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhhc-cHHHH
Confidence 911 233 59999999999999987532100 0 011233443211 11111
Q ss_pred HHHHHh--cC-CCC-----CCCCCC-CCCccCCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCC
Q 038815 1137 ALIEEL--SK-PVP-----GSKDIY-FPTQYSRSFFMQFMACLWKQHWSYWRNPPYNAVRFLFTTAIALTFGTMFWDMGT 1207 (1436)
Q Consensus 1137 ~~~~~~--~~-~~~-----~~~~~~-~~~~~~~s~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~ 1207 (1436)
+.++.. .. ... ..+... ....+..+||+|+.+|++|++++ |||+.+..+|+++++++|+++|++||+++
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~- 431 (659)
T PLN03211 354 AAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD- 431 (659)
T ss_pred HHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 111111 01 000 001000 11235678999999999999988 99999999999999999999999999984
Q ss_pred CcCChhhHHHHHHHHHHHHHHHHHhhhhhcchhhHHhhHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheec
Q 038815 1208 KVKRNRDLFNAMGSMYTAVFFVGAQYCSSVQPVVAVERAVFYREKGAGMYSGMPYAFAQVMIEIPYLFVLSVVYGVIVYA 1287 (1436)
Q Consensus 1208 ~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~RE~~~~~Y~~~~y~la~~l~eiP~~~~~~~~~~~i~Y~ 1287 (1436)
..+++++.|++|+++++.++.+++.+++.|+.||+||+||+++|+|++++|++|++++|+|+.++.+++|++|+||
T Consensus 432 ----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~ 507 (659)
T PLN03211 432 ----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYW 507 (659)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeE
Confidence 4679999999999999989888888889999999999999999999999999999999999999999999999999
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCCCccchhhhhhhhchHH
Q 038815 1288 MIGFEWTAAKFFWYLFFMFFTLLYFTFYGMMTVAMTPNHHIAAIVSTLFYGLWNVFSGFVIPRPRIPEWWRWYYWANPVA 1367 (1436)
Q Consensus 1288 ~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~ 1367 (1436)
|+||++++.+||+|+++++++.++++++|+++++++||..+|+.+++++++++++|+||+++ +||+||+|++|+||++
T Consensus 508 m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~ 585 (659)
T PLN03211 508 MAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTF 585 (659)
T ss_pred cCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999997 7999999999999999
Q ss_pred HHHHHHHHHhhCCccc-----ccCCC-----CcHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHhccc
Q 038815 1368 WTMYGLFASQFGDVED-----KMENG-----ETVKQFVRNYFDFKHEFLGVVAVVVAAFAVLFGVLFAAGIKRFNF 1433 (1436)
Q Consensus 1368 y~~~~l~~~~~~~~~~-----~~~~g-----~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1433 (1436)
|+++|++.|||++.+. .|+.. ..| .++. ..++++...|.++++|++|+++|+++++++|+++||
T Consensus 586 y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c-~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~~ 659 (659)
T PLN03211 586 YSYRLLINVQYGEGKRISSLLGCSLPHGSDRASC-KFVE-EDVAGQISPATSVSVLIFMFVGYRLLAYLALRRIKH 659 (659)
T ss_pred HHHHHHHHHhcCCccccccccCCCCcccCCCCCC-ccch-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999987542 45311 112 2222 233445578999999999999999999999999886
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.9e-88 Score=917.48 Aligned_cols=569 Identities=23% Similarity=0.370 Sum_probs=489.1
Q ss_pred ccCCCceeEEeceeeeeecccc-------------hh-h-----cccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHH
Q 038815 860 LPFEPHSLTFDEVVYSVDMPQE-------------MK-L-----QGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTT 920 (1436)
Q Consensus 860 ~~~~~~~l~~~~~~~~~~~~~~-------------~~-~-----~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTT 920 (1436)
.|.....+.|+|++........ .. . .+.+..++.+|+|||+.++|||++||+|||||||||
T Consensus 23 ~~~~~~~v~~~~l~v~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKST 102 (1394)
T TIGR00956 23 YKPYKLGVAYKNLSAYGVAADSDYQPTFPNALLKILTRGFRKLKKFRDTKTFDILKPMDGLIKPGELTVVLGRPGSGCST 102 (1394)
T ss_pred CCCCeeeEEEECCEEEEEeccccccCchHHHHHHHHHHHHHHhcccCCCCcceeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 3445678999999876632110 00 0 011224477999999999999999999999999999
Q ss_pred HHHHHHCCCCC--CeeEEEEEEcCeeccc--ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCC----CCCHHHHHH
Q 038815 921 LMDVLAGRKTG--GYITGSITISGYLKKQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPP----EVDSETRKM 992 (1436)
Q Consensus 921 Ll~~Lag~~~~--~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~----~~~~~~~~~ 992 (1436)
|||+|+|+..+ .+.+|+|.+||.+... ..+++.++||+|+|.|++.+||+|+|.|++.+|.|. ..+.+++.+
T Consensus 103 LLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~ 182 (1394)
T TIGR00956 103 LLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTPQNRPDGVSREEYAK 182 (1394)
T ss_pred HHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCCCCCCCCCCHHHHHH
Confidence 99999998632 2468999999987642 235667999999999999999999999999888653 234444433
Q ss_pred H-HHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCE
Q 038815 993 F-IEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRT 1070 (1436)
Q Consensus 993 ~-v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~t 1070 (1436)
. ++++++.+||.+++|+.+|++.+++|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|
T Consensus 183 ~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~t 262 (1394)
T TIGR00956 183 HIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTT 262 (1394)
T ss_pred HHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCE
Confidence 3 57799999999999999999889999999999999999999999999999999999999999999999999874 999
Q ss_pred EEEEecCCCHHHHHHhhhhc----------------------CCcccCCCCCCccchhhhccccchhh----------hc
Q 038815 1071 VVCTIHQPSIDIFESFDEAI----------------------PGVQKIKDGCNPATWMLEVTARSQEL----------AL 1118 (1436)
Q Consensus 1071 vi~t~Hqps~~if~~FD~~~----------------------~g~~~~~~~~NPAd~~l~v~~~~~~~----------~~ 1118 (1436)
||+++|||+.++++.||+.+ .|. +||+++|||||++|+++..... ..
T Consensus 263 vii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~~yF~~lG~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~ 341 (1394)
T TIGR00956 263 PLVAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKAKQYFEKMGF-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRT 341 (1394)
T ss_pred EEEEecCCCHHHHHhhceEEEEeCCeEEEECCHHHHHHHHHHcCC-CCCCCCChHHHHHhccChhhhhccccccccCCCC
Confidence 99999999999999999911 233 5999999999999998754211 12
Q ss_pred cccHHHHHhhcHHHHHHHHHHHHhcCCC---------------CCCCCCCCCCccCCcHHHHHHHHHHHHHHHhhcChhH
Q 038815 1119 GVDFHNIYKLSDLYRRNKALIEELSKPV---------------PGSKDIYFPTQYSRSFFMQFMACLWKQHWSYWRNPPY 1183 (1436)
Q Consensus 1119 ~~d~~~~~~~s~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~~~~ 1183 (1436)
..+|++.|++|+.|++..+.+++..... ..++.....+.|..|+|+|+++|++|+++++||||.+
T Consensus 342 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~ 421 (1394)
T TIGR00956 342 PQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSF 421 (1394)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHH
Confidence 3479999999999887776654422110 0011122334688999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCcCChhhHHHHHHHHHHHHHHHHHhhhhhcchhhHHhhHHHHhhhcCCCCChHHHH
Q 038815 1184 NAVRFLFTTAIALTFGTMFWDMGTKVKRNRDLFNAMGSMYTAVFFVGAQYCSSVQPVVAVERAVFYREKGAGMYSGMPYA 1263 (1436)
Q Consensus 1184 ~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~RE~~~~~Y~~~~y~ 1263 (1436)
+.+|+++++++|+++|++||++++ ++++++++.|++|+++++.++.++..+ +.+..||+||+|||.+++|++++|+
T Consensus 422 ~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~ 497 (1394)
T TIGR00956 422 TLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAILFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADA 497 (1394)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHH
Confidence 999999999999999999999986 467899999999999999999887665 4566799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhh
Q 038815 1264 FAQVMIEIPYLFVLSVVYGVIVYAMIGFEWTAAKFFWYLFFMFFTLLYFTFYGMMTVAMTPNHHIAAIVSTLFYGLWNVF 1343 (1436)
Q Consensus 1264 la~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf 1343 (1436)
+|++++|+|+.++.+++|++|+|||+||++++.+||+|+++++++.++++++|+++++++||..+|+.+++++++++++|
T Consensus 498 la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf 577 (1394)
T TIGR00956 498 IASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIY 577 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCccchhhhhhhhchHHHHHHHHHHHhhCCcccccC----C---------------------C---CcHHHHH
Q 038815 1344 SGFVIPRPRIPEWWRWYYWANPVAWTMYGLFASQFGDVEDKME----N---------------------G---ETVKQFV 1395 (1436)
Q Consensus 1344 ~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~----~---------------------g---~~~~~~~ 1395 (1436)
+||++|+++||+||+|++|+||++|+++|++.|||++.+.+|. . | .++.+|+
T Consensus 578 ~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L 657 (1394)
T TIGR00956 578 TGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYL 657 (1394)
T ss_pred cccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHH
Confidence 9999999999999999999999999999999999998777662 1 1 1457899
Q ss_pred HhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHhccc
Q 038815 1396 RNYFDFKHEFLGVVAVVVAAFAVLFGVLFAAGIKRFNF 1433 (1436)
Q Consensus 1396 ~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1433 (1436)
...||++++++|+|++|+++|+++|+++++++++++++
T Consensus 658 ~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 658 KLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred HhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 88899999999999999999999999999999999873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=7.5e-87 Score=898.58 Aligned_cols=570 Identities=23% Similarity=0.362 Sum_probs=479.4
Q ss_pred cCCCceeEEeceeeeeecccc------h-----------h-hcc---cccCceEEeeceEeeEeCCcEEEEEcCCCCcHH
Q 038815 861 PFEPHSLTFDEVVYSVDMPQE------M-----------K-LQG---VHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKT 919 (1436)
Q Consensus 861 ~~~~~~l~~~~~~~~~~~~~~------~-----------~-~~~---~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKT 919 (1436)
+.....+.|+|+++..+.... + . ..+ .++.++.+|+||||.++|||+++|+||||||||
T Consensus 126 ~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKS 205 (1470)
T PLN03140 126 KLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKT 205 (1470)
T ss_pred CCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHH
Confidence 344678999999987762111 0 0 001 122357899999999999999999999999999
Q ss_pred HHHHHHHCCCCC-CeeEEEEEEcCeecccccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCC-------CCHHHH-
Q 038815 920 TLMDVLAGRKTG-GYITGSITISGYLKKQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPE-------VDSETR- 990 (1436)
Q Consensus 920 TLl~~Lag~~~~-~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~-------~~~~~~- 990 (1436)
|||++|+|+.++ ..++|+|.+||.+......++.++||+|+|.|++.+||+|+|.|+++++.+.. ...+++
T Consensus 206 TLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~ 285 (1470)
T PLN03140 206 TLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKD 285 (1470)
T ss_pred HHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHh
Confidence 999999998654 24689999999876544446789999999999999999999999988764321 111111
Q ss_pred -----------------------HHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCC
Q 038815 991 -----------------------KMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1047 (1436)
Q Consensus 991 -----------------------~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTs 1047 (1436)
+..++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|++|||||||+
T Consensus 286 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTs 365 (1470)
T PLN03140 286 AGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEIST 365 (1470)
T ss_pred ccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCc
Confidence 124678999999999999999999899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhhhc----------------------CCcccCCCCCCccc
Q 038815 1048 GLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDEAI----------------------PGVQKIKDGCNPAT 1104 (1436)
Q Consensus 1048 gLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~~~----------------------~g~~~~~~~~NPAd 1104 (1436)
|||+.++..+++.|+++++ .|+|||+++|||+.+++++||+.+ -|. +||+++||||
T Consensus 366 GLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf-~cP~~~n~AD 444 (1470)
T PLN03140 366 GLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESCGF-KCPERKGTAD 444 (1470)
T ss_pred CccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHcCC-CCCCCCChHH
Confidence 9999999999999999987 589999999999999999999911 233 6999999999
Q ss_pred hhhhccccchh-h-----------hccccHHHHHhhcHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcHHHHHHHHHHH
Q 038815 1105 WMLEVTARSQE-L-----------ALGVDFHNIYKLSDLYRRNKALIEELSKPVPGSKDIYFPTQYSRSFFMQFMACLWK 1172 (1436)
Q Consensus 1105 ~~l~v~~~~~~-~-----------~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R 1172 (1436)
|++|+++.... . ....++++.|++|+.+++..++++.........+.....+.|..|++.|++.|++|
T Consensus 445 Fl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R 524 (1470)
T PLN03140 445 FLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDK 524 (1470)
T ss_pred HHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHH
Confidence 99999986432 1 11246899999999888766544321111011111112346899999999999999
Q ss_pred HHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCCcCChhhHHHHHHHHHHHHHHHHHhhhhhcchhhHHhhHHHHhhh
Q 038815 1173 QHWSYWRNPPYNAVRFLFTTAIALTFGTMFWDMGTKVKRNRDLFNAMGSMYTAVFFVGAQYCSSVQPVVAVERAVFYREK 1252 (1436)
Q Consensus 1173 ~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~RE~ 1252 (1436)
+++..||||.++..|+++.+++|+++|++||+++.+..+..+.+.+.|++|+++++..+.++.+ ++.+..||+||+|||
T Consensus 525 ~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~-l~~~~~~r~vf~ker 603 (1470)
T PLN03140 525 EWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAE-LALMIQRLPVFYKQR 603 (1470)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccchhHHhh
Confidence 9999999999999999999999999999999998765455667788999999988888776655 477889999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 038815 1253 GAGMYSGMPYAFAQVMIEIPYLFVLSVVYGVIVYAMIGFEWTAAKFFWYLFFMFFTLLYFTFYGMMTVAMTPNHHIAAIV 1332 (1436)
Q Consensus 1253 ~~~~Y~~~~y~la~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~ 1332 (1436)
.+++|++++|++|++++|+|+.++.+++|++|+|||+||++++++||.|+++++++.++++++++++++++|+..+|+.+
T Consensus 604 ~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~ 683 (1470)
T PLN03140 604 DLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTG 683 (1470)
T ss_pred hccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccCCCCccchhhhhhhhchHHHHHHHHHHHhhCCcccc---cC-CCCcHHHHHHhhcCCccc--cc
Q 038815 1333 STLFYGLWNVFSGFVIPRPRIPEWWRWYYWANPVAWTMYGLFASQFGDVEDK---ME-NGETVKQFVRNYFDFKHE--FL 1406 (1436)
Q Consensus 1333 ~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~---~~-~g~~~~~~~~~~~g~~~~--~~ 1406 (1436)
++++++++++|+||++|+++||+||+|++|+||++|+++|+++|||.+.... |. ...+.++.+++.+|+..+ +.
T Consensus 684 ~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~ 763 (1470)
T PLN03140 684 GALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVLNIFDVFTDKNWY 763 (1470)
T ss_pred HHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHHHhcCcCccccch
Confidence 9999999999999999999999999999999999999999999999765432 21 123334444478999865 56
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcc
Q 038815 1407 GVVAVVVAAFAVLFGVLFAAGIKRFN 1432 (1436)
Q Consensus 1407 ~~~~~il~~~~~~f~~~~~~~l~~~~ 1432 (1436)
|+++++|++|+++|++++++++++++
T Consensus 764 w~~~~iL~~~~v~f~~l~~l~L~~~~ 789 (1470)
T PLN03140 764 WIGVGALLGFTILFNVLFTLALTYLN 789 (1470)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999987
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.4e-82 Score=791.92 Aligned_cols=541 Identities=25% Similarity=0.441 Sum_probs=479.3
Q ss_pred CceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEEcCeecccccccceEEEeccCCCCCCCCC
Q 038815 890 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGSITISGYLKKQETFTRISGYCEQNDIHSPLVT 968 (1436)
Q Consensus 890 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lT 968 (1436)
.+.++|+|+||.++||+++.++||+||||||||++|+|..+.- ...|+|.+||++.+...-++.++|+.|+|+|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3468999999999999999999999999999999999976532 235799999998765444789999999999999999
Q ss_pred HHHHHHHhhhhcCCCC----CCHHHHHH-HHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceec
Q 038815 969 VYESLLYSAWLRLPPE----VDSETRKM-FIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1043 (1436)
Q Consensus 969 v~E~l~f~a~lr~~~~----~~~~~~~~-~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lD 1043 (1436)
|+|+|.|+++++.|.. .++.++.. .+|.+++.+||++|+||+||++.+||+||||||||+||..++++|+++|+|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999998732 22333222 678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhhhc----------------------CCcccCCCCC
Q 038815 1044 EPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDEAI----------------------PGVQKIKDGC 1100 (1436)
Q Consensus 1044 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~~~----------------------~g~~~~~~~~ 1100 (1436)
|+|+|||+.++.++++.||++++. +.|+++++|||+.++|++||+.+ -|. +||+..
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf-~cP~r~ 364 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGF-KCPPRK 364 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCc-cCCCcc
Confidence 999999999999999999999974 89999999999999999999921 122 699999
Q ss_pred Cccchhhhccccchhhh-----------cc-ccHHHHHhhcHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcHHHHHHH
Q 038815 1101 NPATWMLEVTARSQELA-----------LG-VDFHNIYKLSDLYRRNKALIEELSKPVPGSKDIYFPTQYSRSFFMQFMA 1168 (1436)
Q Consensus 1101 NPAd~~l~v~~~~~~~~-----------~~-~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~ 1168 (1436)
++|||+.||++...+.+ .. .++++.|.+|+.|++....++.-......++.....++|..|+|.|++.
T Consensus 365 ~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~ 444 (1391)
T KOG0065|consen 365 GTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKA 444 (1391)
T ss_pred CHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHH
Confidence 99999999998322211 11 5799999999999987654433221222233334456899999999999
Q ss_pred HHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCCcCChhhHHHHHHHHHHHHHHHHHhhhhhcchhhHHhhHHH
Q 038815 1169 CLWKQHWSYWRNPPYNAVRFLFTTAIALTFGTMFWDMGTKVKRNRDLFNAMGSMYTAVFFVGAQYCSSVQPVVAVERAVF 1248 (1436)
Q Consensus 1169 l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf 1248 (1436)
|+.|.++.+.||..|...++++.+++|+++|++|++... ++..+.+.+.|++||++++..++.+..+ +...+.|+||
T Consensus 445 c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~~~~pv~ 521 (1391)
T KOG0065|consen 445 CTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTFQRLPVF 521 (1391)
T ss_pred HHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHHhhcchH
Confidence 999999999999999999999999999999999999983 4667899999999999999998887776 5566799999
Q ss_pred HhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Q 038815 1249 YREKGAGMYSGMPYAFAQVMIEIPYLFVLSVVYGVIVYAMIGFEWTAAKFFWYLFFMFFTLLYFTFYGMMTVAMTPNHHI 1328 (1436)
Q Consensus 1249 ~RE~~~~~Y~~~~y~la~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~ 1328 (1436)
+|||...+|++++|.++..+.++|..++.+++|.+|+||++||.+++++||.|+++++++..+++++.+++++++++...
T Consensus 522 ~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~ 601 (1391)
T KOG0065|consen 522 YKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSI 601 (1391)
T ss_pred HHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccccCCCCccchhhhhhhhchHHHHHHHHHHHhhCCcccccC-CC-------------------
Q 038815 1329 AAIVSTLFYGLWNVFSGFVIPRPRIPEWWRWYYWANPVAWTMYGLFASQFGDVEDKME-NG------------------- 1388 (1436)
Q Consensus 1329 A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~-~g------------------- 1388 (1436)
|+.++++.+.+..+++||+||.++||+||+|++|+||+.|+++++++|||++.+..|. .|
T Consensus 602 An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~ 681 (1391)
T KOG0065|consen 602 ANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGAT 681 (1391)
T ss_pred HhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccc
Confidence 9999999999999999999999999999999999999999999999999999887773 11
Q ss_pred --C---cHHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHhcccc
Q 038815 1389 --E---TVKQFVRNYFDFKHEFLGVVAVVVAAFAVLFGVLFAAGIKRFNFQ 1434 (1436)
Q Consensus 1389 --~---~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~ 1434 (1436)
. .+.+|++..|++++.|.|++++|++||.++|.+++.+++.|+|.-
T Consensus 682 ~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 682 LGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred cCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 1 246788888999999999999999999999999999999999853
No 10
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.7e-79 Score=779.31 Aligned_cols=564 Identities=26% Similarity=0.426 Sum_probs=479.0
Q ss_pred cccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCCCCCCC
Q 038815 175 KKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDNHIGEM 254 (1436)
Q Consensus 175 ~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 254 (1436)
+.+++||+|||++++|||+++|+|||||||||||++|+|+.+++...+|+|.+||.+++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 34577999999999999999999999999999999999998875556899999999876544567899999999999999
Q ss_pred CHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc-
Q 038815 255 TVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM- 333 (1436)
Q Consensus 255 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~- 333 (1436)
||+|||.|+++++.+.. ..+. +.+..++.+++.+||++++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~-------~~~~------------------------~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRR-------VTKK------------------------EKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCC-------CCHH------------------------HHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 99999999987763221 1111 123357889999999999999999864
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
.++|||||||||+||+++ ++||||||+|||+.++.++++.|+++++ .+.|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 789999999999997766 5999999999999999999999999876 4889999999999999999999999999
Q ss_pred CeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHHhhcChhhhhhHhhhccccccccCHHHHHHHHHhchhhHHHHHHhcC
Q 038815 409 GLIVYLGPRELVLDFFESMGFKCPERKGVADFLQEVTSRKDQQQYWAHKEMRYRFVTVQEFCEAFQSFHVGQKLTAELRT 488 (1436)
Q Consensus 409 G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~ef~~~f~~s~~~~~~~~~l~~ 488 (1436)
|+++|+|+++++.+||+++||+||++.|++||+.++++..+.... . ...+.+++.+.|++++..++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998765432110 0 112345677778777666555444332
Q ss_pred CCCCCCC---CcccccCCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhheeeeccCCCCccCCcchh
Q 038815 489 PFDKSKS---HPAALSMKEYGVGKKELLKANISREFLLMKRNSFVYIFKLTQLSTVAMVSMSLFFRTKMPKDSVNDGGIY 565 (1436)
Q Consensus 489 ~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~gslf~~~~~~~~~~~~~~~~ 565 (1436)
...+... ........++..+++.|+..+++|.++..+||+..+..++++.+++|+++|++|++.+. + ..+.+.+
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~--~-~~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL--T-QKGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC--C-HHHHHHH
Confidence 1111100 00111234577899999999999999999999999999999999999999999996543 2 2345667
Q ss_pred hHHHHHHHHHHHHHHH-HHHHHHHhcchhhhhhhcCCccchHhHHHHHHHHHhhHHHHHHHHHHhhhhhhccccccHHHH
Q 038815 566 IGASFFAVMMTMFNGM-SDISMTIAKLPVFYKQRDLRFYPAWSYALPAWIVKIPISFLEVAAWVFLTYYVIGFDPNVGRF 644 (1436)
Q Consensus 566 ~g~lff~~l~~~~~~~-~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f 644 (1436)
.|++|+.++..++.++ ..+..+..+|++|+|||..++|++++|.+++.+.++|+.++.+++|++++|||+|+.+++++|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 8999999888888765 456677789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccchhhhHHHhHhhChHHHHHHHHHHHhh
Q 038815 645 FKQYLLLLFVNQMATALFRFIGAAGRNMIVAMSFGSFALLMLFALGGFVLSRDDINKWWIWGYWCSPMMYAQNAIVANEF 724 (1436)
Q Consensus 645 f~~~l~~~l~~~~~~~lf~~iaa~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~i~~w~~W~~~isP~~ya~~al~~nef 724 (1436)
|.|++++++...++.+++.++++++++..+|..+++++++++++++||+++.++||+||+|++|+||+.|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-ccccCC---CccchhHHhhcccCcccCCchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 038815 725 LGHSW-RKFTTN---SNESLGVQALKSRGFFPHAYWYWLGLGAVIGFLLVFNVGFTLSLTFL 782 (1436)
Q Consensus 725 ~~~~~-~~~~~~---~~~~~G~~~L~~~~~~~~~~~~w~~~g~lig~~v~f~i~~~~~L~~~ 782 (1436)
.+..+ .|...+ .+...|+++|+.+|+..+ ++|.+++++++++++|.++.+++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98776 453221 133468999999988653 568999999999999999999999864
No 11
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=9.5e-79 Score=770.82 Aligned_cols=604 Identities=21% Similarity=0.335 Sum_probs=468.6
Q ss_pred CCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhhhhhccccccccccccccccccceeeeceEEEEeCCeEE
Q 038815 115 LPEVEVRYENLNVEAEAFLASKALPTFTNFFTNIIEFIYFLTTCKRLKGSLNSLQILPTRKKHLTILKDVSGIIRPGSMT 194 (1436)
Q Consensus 115 ~p~~~v~~~~l~v~~~~~~~~~~~pt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ 194 (1436)
.+.++++|+|++..+...-...+... +...+. . -...+++.++++++++|+|||++++|||++
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~------------~-~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~ 97 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILG------------H-KPKISDETRQIQERTILNGVTGMASPGEIL 97 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----cccccc------------c-ccccccccccCCCCeeeeCCEEEEECCEEE
Confidence 45789999999999754310111111 111111 0 001122334455678999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCCCCCCCCHHHHHHhhhhhccCCCccc
Q 038815 195 LLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDNHIGEMTVRETLAFSARCQGVGSRFD 274 (1436)
Q Consensus 195 ~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~ 274 (1436)
+|+|||||||||||++|+|+++++ ..+|+|.+||+++... .++.++||+|+|.+++.+||+|||.|++.++....
T Consensus 98 aI~GpnGaGKSTLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~--- 172 (659)
T PLN03211 98 AVLGPSGSGKSTLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS--- 172 (659)
T ss_pred EEECCCCCCHHHHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC---
Confidence 999999999999999999998774 3589999999987532 23568999999999999999999999876542110
Q ss_pred hhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccCCCCHHHHHHHhhhhhh---
Q 038815 275 MLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIRGISGGQKRRVTTGPAL--- 351 (1436)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~rgLSGGqrkRvsia~a~--- 351 (1436)
.++ ++....++++++.+||++++||.+|++..++|||||||||+||+++
T Consensus 173 ----~~~------------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~ 224 (659)
T PLN03211 173 ----LTK------------------------QEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLIN 224 (659)
T ss_pred ----CCH------------------------HHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhC
Confidence 000 1122346789999999999999999999999999999999997666
Q ss_pred --hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEecChHHHHHHHHhcCC
Q 038815 352 --ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGLIVYLGPRELVLDFFESMGF 429 (1436)
Q Consensus 352 --vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~iv~~G~~~~~~~~F~~lGf 429 (1436)
+|+|||||+|||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+.+++.+||+++||
T Consensus 225 P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~ 303 (659)
T PLN03211 225 PSLLILDEPTSGLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGF 303 (659)
T ss_pred CCEEEEeCCCCCcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCC
Confidence 5999999999999999999999999876 5789999999988889999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHhhcChhhhhhHhhhccccccccCHHHHHHHHHhchhhHHHHHHhcC---CCCCCC-----CCcc-cc
Q 038815 430 KCPERKGVADFLQEVTSRKDQQQYWAHKEMRYRFVTVQEFCEAFQSFHVGQKLTAELRT---PFDKSK-----SHPA-AL 500 (1436)
Q Consensus 430 ~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~ef~~~f~~s~~~~~~~~~l~~---~~~~~~-----~~~~-~~ 500 (1436)
+||++.|+|||+.++++...+.+.....+.+ ...+++.+.|++.. .++..+.... +....+ ..+. ..
T Consensus 304 ~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (659)
T PLN03211 304 SPSFPMNPADFLLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRS 379 (659)
T ss_pred CCCCCCCHHHHHHHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhccccccccc
Confidence 9999999999999998764321100000111 11233445554321 1111111100 000000 0000 00
Q ss_pred cCCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhheeeeccCCCCccCCcchhhHHHHHHHHHHHH-H
Q 038815 501 SMKEYGVGKKELLKANISREFLLMKRNSFVYIFKLTQLSTVAMVSMSLFFRTKMPKDSVNDGGIYIGASFFAVMMTMF-N 579 (1436)
Q Consensus 501 ~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~gslf~~~~~~~~~~~~~~~~~g~lff~~l~~~~-~ 579 (1436)
....+..+++.|+..+++|+++. +|+......|+++.+++|+++|++|++.+ ..+.+.+.|++||.+++.++ .
T Consensus 380 ~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~ 453 (659)
T PLN03211 380 SDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFP 453 (659)
T ss_pred CCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 11234568999999999999888 78887778999999999999999999653 23466788999998777554 5
Q ss_pred HHHHHHHHHhcchhhhhhhcCCccchHhHHHHHHHHHhhHHHHHHHHHHhhhhhhccccccHHHHHHHHHHHHHHHHHHH
Q 038815 580 GMSDISMTIAKLPVFYKQRDLRFYPAWSYALPAWIVKIPISFLEVAAWVFLTYYVIGFDPNVGRFFKQYLLLLFVNQMAT 659 (1436)
Q Consensus 580 ~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~ 659 (1436)
.++.+..+..+|++|+|||..++|++++|++|+++.++|+.++.+++|++++|||+|+.+++++||.|++++++..+++.
T Consensus 454 ~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~ 533 (659)
T PLN03211 454 SFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQ 533 (659)
T ss_pred HHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 67888888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccchhhhHHHhHhhChHHHHHHHHHHHhhcCCc-----cccccC
Q 038815 660 ALFRFIGAAGRNMIVAMSFGSFALLMLFALGGFVLSRDDINKWWIWGYWCSPMMYAQNAIVANEFLGHS-----WRKFTT 734 (1436)
Q Consensus 660 ~lf~~iaa~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~i~~w~~W~~~isP~~ya~~al~~nef~~~~-----~~~~~~ 734 (1436)
+++.+++++++++.+|+.+++++++++++|+||+++ +||+||+|++|+||+.|++++++.|||.+.+ ..|..+
T Consensus 534 s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~ 611 (659)
T PLN03211 534 GLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLP 611 (659)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCc
Confidence 999999999999999999999999999999999997 7999999999999999999999999997643 244322
Q ss_pred CCccchhHHhhcccCcccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 038815 735 NSNESLGVQALKSRGFFPHAYWYWLGLGAVIGFLLVFNVGFTLSLTFLN 783 (1436)
Q Consensus 735 ~~~~~~G~~~L~~~~~~~~~~~~w~~~g~lig~~v~f~i~~~~~L~~~~ 783 (1436)
......+..++....+. ....|.+++++++++++|.++.+++|++.+
T Consensus 612 ~~~~~~~c~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 612 HGSDRASCKFVEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred ccCCCCCCccchhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 11000111122222222 234788999999999999999999998654
No 12
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-78 Score=760.63 Aligned_cols=557 Identities=32% Similarity=0.512 Sum_probs=472.3
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCCCCCCCCH
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDNHIGEMTV 256 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 256 (1436)
.+++|+||||.++|||++|||||+||||||||++|+|+..++.+++|+|++||++.+....++.+|||.|+|.++|++||
T Consensus 42 ~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV 121 (613)
T KOG0061|consen 42 TKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTV 121 (613)
T ss_pred cceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccH
Confidence 46799999999999999999999999999999999999988677899999999887776778899999999999999999
Q ss_pred HHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccCC
Q 038815 257 RETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIRG 336 (1436)
Q Consensus 257 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~rg 336 (1436)
+|||.|+|+++-+.+ +++ ++.+.+++.+++.|||.+|+||++|+...||
T Consensus 122 ~EtL~f~A~lrlp~~-------~~~------------------------~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rg 170 (613)
T KOG0061|consen 122 RETLRFSALLRLPSS-------LSK------------------------EEKRERVEEVISELGLEKCADTLIGNPGIRG 170 (613)
T ss_pred HHHHHHHHHhcCCCC-------CCH------------------------HHHHHHHHHHHHHcCChhhccceecCCCCCc
Confidence 999999999885431 122 2345678999999999999999999998999
Q ss_pred CCHHHHHHHhhh-----hhhhhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 038815 337 ISGGQKRRVTTG-----PALALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGLI 411 (1436)
Q Consensus 337 LSGGqrkRvsia-----~a~vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~i 411 (1436)
+||||||||+|| .|.+||+||||||||+.++.++++.|+++|+. |+|+|+++|||+.+++++||++++|++|++
T Consensus 171 iSGGErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~ 249 (613)
T KOG0061|consen 171 LSGGERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEV 249 (613)
T ss_pred cccchhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcE
Confidence 999999999996 56679999999999999999999999999987 999999999999999999999999999999
Q ss_pred EEecChHHHHHHHHhcCCCCCCCCCHHHHHHhhcChh--hhhhHhhhccccccccCHHHHHHHHHhchhhHHHHHHhcCC
Q 038815 412 VYLGPRELVLDFFESMGFKCPERKGVADFLQEVTSRK--DQQQYWAHKEMRYRFVTVQEFCEAFQSFHVGQKLTAELRTP 489 (1436)
Q Consensus 412 v~~G~~~~~~~~F~~lGf~cp~~~~~adfl~~v~s~~--~~~~~~~~~~~~~~~~~~~ef~~~f~~s~~~~~~~~~l~~~ 489 (1436)
+|+|+++++.+||++.|++||++.|++||+.++.+.. .+..... .......+.++..+...+........
T Consensus 250 vy~G~~~~~~~ff~~~G~~~P~~~Npadf~l~l~s~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (613)
T KOG0061|consen 250 VYSGSPRELLEFFSSLGFPCPELENPADFLLDLLSVDSGTRELEEA--------VRIAKLINKFSQTDNLKKTLEALEKS 321 (613)
T ss_pred EEecCHHHHHHHHHhCCCCCCCcCChHHHHHHHHccCCCchhHHhH--------HHHHHHhhhccccchhhhhHHHHhhh
Confidence 9999999999999999999999999999999987742 1110000 00011111111000000000000000
Q ss_pred CCCCCCCcccccCCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhheeeeccCCCCccCCcchhhHHH
Q 038815 490 FDKSKSHPAALSMKEYGVGKKELLKANISREFLLMKRNSFVYIFKLTQLSTVAMVSMSLFFRTKMPKDSVNDGGIYIGAS 569 (1436)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~gslf~~~~~~~~~~~~~~~~~g~l 569 (1436)
..... + .......++|.|+..+++|.+..++|++..+..|..+.+.+++++|.+|++..... .+...+.|++
T Consensus 322 ~~~~~--~---~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~---~~~~~~~g~~ 393 (613)
T KOG0061|consen 322 LSTSK--K---VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDA---KGIQNRLGLF 393 (613)
T ss_pred ccccc--c---cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCch---HHHHHHHHHH
Confidence 00000 0 00111678999999999999999999999999999999999999999999763222 2344678888
Q ss_pred HHHHHHHHHHHHH-HHHHHHhcchhhhhhhcCCccchHhHHHHHHHHHhhHHHHHHHHHHhhhhhhccccccHHHHHHHH
Q 038815 570 FFAVMMTMFNGMS-DISMTIAKLPVFYKQRDLRFYPAWSYALPAWIVKIPISFLEVAAWVFLTYYVIGFDPNVGRFFKQY 648 (1436)
Q Consensus 570 ff~~l~~~~~~~~-~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 648 (1436)
|+.+.+..+..+. .++.+..++++|.||+..+.|+.++|++|+.+.++|+.++.+++|.+++|||+|+.++..+|+.+.
T Consensus 394 ~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~ 473 (613)
T KOG0061|consen 394 FFILSFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFL 473 (613)
T ss_pred HHHHHHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHH
Confidence 8888877676655 588899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccchhhhHHHhHhhChHHHHHHHHHHHhhcCCc
Q 038815 649 LLLLFVNQMATALFRFIGAAGRNMIVAMSFGSFALLMLFALGGFVLSRDDINKWWIWGYWCSPMMYAQNAIVANEFLGHS 728 (1436)
Q Consensus 649 l~~~l~~~~~~~lf~~iaa~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~i~~w~~W~~~isP~~ya~~al~~nef~~~~ 728 (1436)
++.++..+++.+++.+++++.++...|.++++++++.+++++||+++.+++|.||.|+.|+|+..|++|+++.|||.+..
T Consensus 474 l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~ 553 (613)
T KOG0061|consen 474 LIILLSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGS 553 (613)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999744
Q ss_pred cccccC--CCccchhHHhhcccCcccCCchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 038815 729 WRKFTT--NSNESLGVQALKSRGFFPHAYWYWLGLGAVIGFLLVFNVGFTLSLTFLN 783 (1436)
Q Consensus 729 ~~~~~~--~~~~~~G~~~L~~~~~~~~~~~~w~~~g~lig~~v~f~i~~~~~L~~~~ 783 (1436)
..|... ..+...|.++++..++...+ .|.++.++++++++|.++++++|++..
T Consensus 554 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 554 SRCFLSGNLCCESTGEDVLKQLGFEDSS--FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred cccccCcCCcccccHHHHHHhcCCcccc--cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 455433 35567889999988886544 568999999999999999999998754
No 13
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.3e-64 Score=677.41 Aligned_cols=202 Identities=27% Similarity=0.396 Sum_probs=173.6
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..+..+|+++.+.. +++.+|+|||+.|++||++||+||||||||||+++|+|... +.+|+|.++|++
T Consensus 1936 ~~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~ 2002 (2272)
T TIGR01257 1936 DILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKS 2002 (2272)
T ss_pred ceEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEE
Confidence 35788898876531 12579999999999999999999999999999999999876 357999999987
Q ss_pred ccc--ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 038815 945 KKQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTE 1022 (1436)
Q Consensus 945 ~~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1022 (1436)
... ...++.+|||+|++.+++.+||+|+|.+.+.++. .+.++.++.++++++.++|.+.+|..+ +.||||
T Consensus 2003 i~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGG 2074 (2272)
T TIGR01257 2003 ILTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGG 2074 (2272)
T ss_pred CcchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHH
Confidence 632 2345679999999999999999999998877653 233444567889999999999888875 579999
Q ss_pred HHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1023 qrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||+||+||+.+|+||+|||||+|||+.+++.+++.|++++++|+|||+|+|++. ++-...|+
T Consensus 2075 qKqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDr 2139 (2272)
T TIGR01257 2075 NKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTR 2139 (2272)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999888999999999974 56677888
No 14
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-65 Score=644.42 Aligned_cols=755 Identities=22% Similarity=0.271 Sum_probs=402.2
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCC
Q 038815 176 KHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIG 252 (1436)
Q Consensus 176 ~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 252 (1436)
++..||+|+|+.|++|+.++|+|||||||||++++|.+.++|+ +|+|.++|.++.+++. +..+|.|+|+|.+|.
T Consensus 364 pdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~ 440 (1228)
T KOG0055|consen 364 PDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFA 440 (1228)
T ss_pred CcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeechhhhc
Confidence 3567999999999999999999999999999999999999998 9999999999988765 468999999997665
Q ss_pred CCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCc
Q 038815 253 EMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDE 332 (1436)
Q Consensus 253 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 332 (1436)
.||+||+.|+. |+...+...+++.. ....--+..|++..||.||+.
T Consensus 441 -~tI~eNI~~G~-------------------------~dat~~~i~~a~k~--------ana~~fi~~lp~g~~T~vge~ 486 (1228)
T KOG0055|consen 441 -TTIRENIRYGK-------------------------PDATREEIEEAAKA--------ANAHDFILKLPDGYDTLVGER 486 (1228)
T ss_pred -ccHHHHHhcCC-------------------------CcccHHHHHHHHHH--------ccHHHHHHhhHHhhcccccCC
Confidence 69999999863 11112222222211 111122334788899999987
Q ss_pred ccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
.+ +|||||||||+||||++ ||||||||+||+.+...+.+.|.+.. .++|+|| +.|....+-+ +|+|++|+
T Consensus 487 g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTiv-VaHRLStIrn-aD~I~v~~ 561 (1228)
T KOG0055|consen 487 GV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIV-VAHRLSTIRN-ADKIAVME 561 (1228)
T ss_pred CC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEE-Eeeehhhhhc-cCEEEEEE
Confidence 76 49999999999999875 99999999999999999999998754 3677777 4455555555 99999999
Q ss_pred CCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHH--hhcChhhhhhHhhhccccccccCHHHHHHHHHhchhhHHHHHH
Q 038815 408 DGLIVYLGPRELVLDFFESMGFKCPERKGVADFLQ--EVTSRKDQQQYWAHKEMRYRFVTVQEFCEAFQSFHVGQKLTAE 485 (1436)
Q Consensus 408 ~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~--~v~s~~~~~~~~~~~~~~~~~~~~~ef~~~f~~s~~~~~~~~~ 485 (1436)
+|+|++.|.++|+... ..-.++... +.....+.+ .+ .... .++.....+.+. ....
T Consensus 562 ~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~~-~~--~~~~-----~~~~~~s~~~s~----~~~~ 619 (1228)
T KOG0055|consen 562 EGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAEDE-EE--EESL-----KEERSRSLKSSS----SSPS 619 (1228)
T ss_pred CCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhcc-cc--ccch-----hhhhhhcccccc----cccc
Confidence 9999999999999751 112233322 211111100 00 0000 000000000000 0000
Q ss_pred hcCCCCC-------CCCC-cc-cccCCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHH-------HHHHHhhhee
Q 038815 486 LRTPFDK-------SKSH-PA-ALSMKEYGVGKKELLKANISREFLLMKRNSFVYIFKLTQLS-------TVAMVSMSLF 549 (1436)
Q Consensus 486 l~~~~~~-------~~~~-~~-~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~-------~~ali~gslf 549 (1436)
...+... .... +. .........++++.++ +.+.++.+.+...+..+ +.|++++.++
T Consensus 620 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~s~~~i~k--------~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~ 691 (1228)
T KOG0055|consen 620 LSRGSNRSNLLSVKPEGEDPEEPVSEEDEKVSFWRIFK--------LNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVL 691 (1228)
T ss_pred ccCCccccccccccccccccccccccccccccHHHHHH--------hccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 0000000 0000 00 0011112334444433 33334443333333222 2233333322
Q ss_pred eecc-CCCCccCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhcCCccchHhHHHHHHHHHhhHHHHHHHHHH
Q 038815 550 FRTK-MPKDSVNDGGIYIGASFFAVMMTMFNGMSDISMTIAKLPVFYKQRDLRFYPAWSYALPAWIVKIPISFLEVAAWV 628 (1436)
Q Consensus 550 ~~~~-~~~~~~~~~~~~~g~lff~~l~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~ 628 (1436)
--.- .+.+..........++|.++.. ...+..++. .|.++..-..+...+- ...|.
T Consensus 692 ~~f~~~~~~~~~~~~~~~al~f~~l~~-----~~~i~~~~q-----------------~~~f~~~ge~Lt~R~R-~~~F~ 748 (1228)
T KOG0055|consen 692 EAFYPPDDDELKREVRAWALIFLGLGI-----VSGITNFLQ-----------------HYFFGIAGEKLTKRLR-SMMFR 748 (1228)
T ss_pred HHHhCCChHHHHHHHHHHHHHHHHHHH-----HHHHHHHHH-----------------HHHHHHHHHHHHHHHH-HHHHH
Confidence 1111 1111111111112222222211 111111100 0111111111111100 11111
Q ss_pred hhhhhhccc-c---ccHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccch
Q 038815 629 FLTYYVIGF-D---PNVGRFFKQYL-----LLLFVNQMATALFRFIGAAGRNMIVAMSFGSFALLMLFALGGFVLSRDDI 699 (1436)
Q Consensus 629 ~i~Y~~~gl-~---~~~~~ff~~~l-----~~~l~~~~~~~lf~~iaa~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~i 699 (1436)
.+++.=+++ + .+ ++....+. +--++..-...+...++++.-.+.+|+.++|-+.++.+....+++-..-+
T Consensus 749 ~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~ 827 (1228)
T KOG0055|consen 749 ALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYL 827 (1228)
T ss_pred HHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222211111 1 12 33333322 11122223333444455555556666666665544443322211110000
Q ss_pred hhhHHHhHhhC---hHHHHHHHHHHHhhcCCccccccCCCccchhHHhhcccCc---ccC----CchhHHHHHHHHHHHH
Q 038815 700 NKWWIWGYWCS---PMMYAQNAIVANEFLGHSWRKFTTNSNESLGVQALKSRGF---FPH----AYWYWLGLGAVIGFLL 769 (1436)
Q Consensus 700 ~~w~~W~~~is---P~~ya~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~---~~~----~~~~w~~~g~lig~~v 769 (1436)
.. .++.-.+ --.|.-.+-+++|-... ++.... ......+++.+.- .+. ..-.|.+++.-+...+
T Consensus 828 ~~--~~~~~~~~~~~~~~~ea~~iA~eai~N-IrTV~a---l~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~ 901 (1228)
T KOG0055|consen 828 QK--KFLKGFSKDDKKAYEEASKIAIEAVSN-IRTVAA---LCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSL 901 (1228)
T ss_pred HH--HHHhhhhHHHHHHHHHHHHHHHHHHHh-HHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000000 00111112222221110 000000 0001111111000 000 0113444443333322
Q ss_pred H---HHHHHHHHHhhccccCCCceeeecCccccccc-ccCCCcccCCCCCCCCccccCCCCCCCccccccccCCCccchh
Q 038815 770 V---FNVGFTLSLTFLNKFEKPRAVIFDESESNEKD-NRTGGTLQSSTSGSSSSLRTRSGESGDYIWERSSSMSSSVTET 845 (1436)
Q Consensus 770 ~---f~i~~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (1436)
+ +.+.++.+...+...... +++....-.. ..+ . .......+..++.... ...
T Consensus 902 ~~~~~A~~f~~G~~Li~~g~~~----~~~~~~vf~~l~~t-------a----~~~~~~~s~~Pd~~ka---------~~A 957 (1228)
T KOG0055|consen 902 LFFVYALSFWYGARLISNGEMT----FEDVFRVFMALSFT-------A----MALGQASSYAPDISKA---------KIA 957 (1228)
T ss_pred HHHHHHHHHHHhHHHHhcCCcC----HHHHHHHHHHHHHH-------H----HHHHHHHhhCcHHHHH---------HHH
Confidence 2 223333333332211100 0000000000 000 0 0000000000000000 000
Q ss_pred hHHHhhhhh---------ccCccccCCCceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCC
Q 038815 846 AVEIRNLIR---------KKGMVLPFEPHSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGA 916 (1436)
Q Consensus 846 ~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGa 916 (1436)
+.......+ ..+...|.....++|+||++.++..+ ..++|+|+|+++++|+.+||+|||||
T Consensus 958 a~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGs 1027 (1228)
T KOG0055|consen 958 AGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGS 1027 (1228)
T ss_pred HHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCC
Confidence 000011100 01112233345799999999998543 46799999999999999999999999
Q ss_pred cHHHHHHHHHCCCCCCeeEEEEEEcCeeccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHH
Q 038815 917 GKTTLMDVLAGRKTGGYITGSITISGYLKKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMF 993 (1436)
Q Consensus 917 GKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~ 993 (1436)
||||.+.+|-+..+ +..|.|.|||++++. ...|+.+|.|.|+|.++. -|++||+.|+ . . +.+.++
T Consensus 1028 GKSTvI~LLeRfYd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG-~---~-~vs~~e---- 1095 (1228)
T KOG0055|consen 1028 GKSTVISLLERFYD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYG-S---E-EVSEEE---- 1095 (1228)
T ss_pred CHHHHHHHHHHhcC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhcc-C---C-CCCHHH----
Confidence 99999999987654 568999999988754 457889999999999986 6999999998 1 1 134333
Q ss_pred HHHHHHH-------cCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH
Q 038815 994 IEEIMEL-------VELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE 1066 (1436)
Q Consensus 994 v~~~l~~-------l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~ 1066 (1436)
+.+.++. .+|.+-.||.||..|. +||||||||++|||||++||+||+|||.||.||+++.+.++++|.+. .
T Consensus 1096 Ii~Aak~ANaH~FI~sLP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a-~ 1173 (1228)
T KOG0055|consen 1096 IIEAAKLANAHNFISSLPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRA-M 1173 (1228)
T ss_pred HHHHHHHhhhHHHHhcCcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHh-h
Confidence 2333333 2556667999998764 79999999999999999999999999999999999999999999986 4
Q ss_pred cCCEEEEEecCCCH
Q 038815 1067 TGRTVVCTIHQPSI 1080 (1436)
Q Consensus 1067 ~g~tvi~t~Hqps~ 1080 (1436)
.|||.|++.|++|.
T Consensus 1174 ~gRT~IvIAHRLST 1187 (1228)
T KOG0055|consen 1174 EGRTTIVIAHRLST 1187 (1228)
T ss_pred cCCcEEEEecchhh
Confidence 59999999999874
No 15
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=9e-59 Score=552.92 Aligned_cols=207 Identities=30% Similarity=0.378 Sum_probs=175.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-CCcccEEEEcCccCCCCCc-------cceEEEEcCCC-
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS-LKVSGRVTYNGHNMDEFEP-------QRVAAYISQHD- 248 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 248 (1436)
..+++||||+|.|||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++|++|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 46999999999999999999999999999999999999886 4568999999997654433 26799999996
Q ss_pred -CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 249 -NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 249 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
.+.|-+||.+.+.-..+.++... ..++...+.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 56777999999876655543211 12234456789999999986553
Q ss_pred cccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
+.+++.|||||||||.||+|+ +|++||||++||..++.+|++.|+++.+. .++.++.++|+..-+.+++|+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e-~g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRE-LGMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHH-cCcEEEEEcCCHHHHHHhcCe
Confidence 678999999999999997665 59999999999999999999999999865 567777799999999999999
Q ss_pred EEEecCCeEEEecChHHHH
Q 038815 403 IILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~ 421 (1436)
|+||++|++++.|+++++.
T Consensus 225 v~Vm~~G~iVE~G~~~~i~ 243 (539)
T COG1123 225 VVVMYKGEIVETGPTEEIL 243 (539)
T ss_pred EEEEECCEEEEecCHHHHH
Confidence 9999999999999999885
No 16
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.5e-58 Score=624.24 Aligned_cols=202 Identities=19% Similarity=0.320 Sum_probs=166.8
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC------------
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 932 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~------------ 932 (1436)
..++|+||+|.++.. ++..+|+|+|+.|+||+++||+||||||||||+++|.|..++.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 369999999988531 1246999999999999999999999999999999999976531
Q ss_pred ----------------------------------------eeEEEEEEcCeeccc---ccccceEEEeccCCCCCCCCCH
Q 038815 933 ----------------------------------------YITGSITISGYLKKQ---ETFTRISGYCEQNDIHSPLVTV 969 (1436)
Q Consensus 933 ----------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv 969 (1436)
+.+|+|.+||.+..+ ..+++.+|||+|++.+++ .|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccH
Confidence 148999999988653 467889999999999985 799
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-------ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 038815 970 YESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-------LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1042 (1436)
Q Consensus 970 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~l 1042 (1436)
+|||.|+. | +.+.+ .++++++..++.+ -.||.||..| ..||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~----~-~at~e----eI~~A~k~A~l~~fI~~LP~GydT~VGe~G-~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK----E-DATRE----DVKRACKFAAIDEFIESLPNKYDTNVGPYG-KSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC----C-CCCHH----HHHHHHHHcCCHHHHHhCccccCCccCCCC-CcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999862 2 23332 3566666666544 4588888654 57999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHH-HcCCEEEEEecCCCHHHHHHhhhh
Q 038815 1043 DEPTSGLDARAAAIVMRTVKNTV-ETGRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1043 DEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
|||||+||+.+++.|++.|+++. .+|+|+|+++|+++ ..+.+|+.
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~I 1428 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKI 1428 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEE
Confidence 99999999999999999999986 35899999999984 45678873
No 17
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-58 Score=575.75 Aligned_cols=447 Identities=21% Similarity=0.287 Sum_probs=328.3
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc----cceEEEE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP----QRVAAYI 244 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv 244 (1436)
+++.++++++.+|+|||++|++||+++|+||||||||||||+|+|.++|+ ..+|+|.++|+++..... ++.++||
T Consensus 9 ~nl~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v 87 (506)
T PRK13549 9 KNITKTFGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAII 87 (506)
T ss_pred eeeEEEeCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEE
Confidence 34445555567999999999999999999999999999999999998861 129999999998765432 3569999
Q ss_pred cCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccc
Q 038815 245 SQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDIC 324 (1436)
Q Consensus 245 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 324 (1436)
+|++.+++.+||+||+.++......+. ... .+....++.+++.+||++.
T Consensus 88 ~q~~~~~~~~tv~e~l~~~~~~~~~~~-------~~~------------------------~~~~~~~~~~l~~~~l~~~ 136 (506)
T PRK13549 88 HQELALVKELSVLENIFLGNEITPGGI-------MDY------------------------DAMYLRAQKLLAQLKLDIN 136 (506)
T ss_pred EeccccCCCCcHHHHhhhcccccccCC-------cCH------------------------HHHHHHHHHHHHHcCCCCC
Confidence 999989999999999998643210000 000 0012235678999999876
Q ss_pred ccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 038815 325 ADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDL 399 (1436)
Q Consensus 325 ~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~l 399 (1436)
.+.. ++.|||||||||+||+++ +|+|||||+|||+.++.++.+.|+++++ . +++|+.++|+..++.++
T Consensus 137 ~~~~-----~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvi~~tH~~~~~~~~ 209 (506)
T PRK13549 137 PATP-----VGNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-H-GIACIYISHKLNEVKAI 209 (506)
T ss_pred cccc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHHh
Confidence 6654 457999999999998776 4999999999999999999999999864 3 44566688899999999
Q ss_pred cCeEEEecCCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHHhhcChhhhhhHhhhccccccccCHHHHHHHHHhchhh
Q 038815 400 FDDIILLSDGLIVYLGPRELVLDFFESMGFKCPERKGVADFLQEVTSRKDQQQYWAHKEMRYRFVTVQEFCEAFQSFHVG 479 (1436)
Q Consensus 400 fD~vilL~~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~ef~~~f~~s~~~ 479 (1436)
+|+|++|++|++++.|+.+++.. .+..+.+
T Consensus 210 ~d~v~~l~~G~i~~~~~~~~~~~--------------------------------------------~~~~~~~------ 239 (506)
T PRK13549 210 SDTICVIRDGRHIGTRPAAGMTE--------------------------------------------DDIITMM------ 239 (506)
T ss_pred cCEEEEEECCEEeeecccccCCH--------------------------------------------HHHHHHh------
Confidence 99999999999998875432100 0000000
Q ss_pred HHHHHHhcCCCCCCCCCcccccCCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhheeeeccCCCCcc
Q 038815 480 QKLTAELRTPFDKSKSHPAALSMKEYGVGKKELLKANISREFLLMKRNSFVYIFKLTQLSTVAMVSMSLFFRTKMPKDSV 559 (1436)
Q Consensus 480 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~gslf~~~~~~~~~~ 559 (1436)
+ . ...
T Consensus 240 ----------------------------------------------------------------------~--~--~~~- 244 (506)
T PRK13549 240 ----------------------------------------------------------------------V--G--REL- 244 (506)
T ss_pred ----------------------------------------------------------------------h--C--cCc-
Confidence 0 0 000
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhcCCccchHhHHHHHHHHHhhHHHHHHHHHHhhhhhhccccc
Q 038815 560 NDGGIYIGASFFAVMMTMFNGMSDISMTIAKLPVFYKQRDLRFYPAWSYALPAWIVKIPISFLEVAAWVFLTYYVIGFDP 639 (1436)
Q Consensus 560 ~~~~~~~g~lff~~l~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~ 639 (1436)
..
T Consensus 245 ~~------------------------------------------------------------------------------ 246 (506)
T PRK13549 245 TA------------------------------------------------------------------------------ 246 (506)
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccchhhhHHHhHhhChHHHHHHHH
Q 038815 640 NVGRFFKQYLLLLFVNQMATALFRFIGAAGRNMIVAMSFGSFALLMLFALGGFVLSRDDINKWWIWGYWCSPMMYAQNAI 719 (1436)
Q Consensus 640 ~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~i~~w~~W~~~isP~~ya~~al 719 (1436)
..|
T Consensus 247 ----------------------------------------------------------~~~------------------- 249 (506)
T PRK13549 247 ----------------------------------------------------------LYP------------------- 249 (506)
T ss_pred ----------------------------------------------------------ccc-------------------
Confidence 000
Q ss_pred HHHhhcCCccccccCCCccchhHHhhcccCcccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceeeecCcccc
Q 038815 720 VANEFLGHSWRKFTTNSNESLGVQALKSRGFFPHAYWYWLGLGAVIGFLLVFNVGFTLSLTFLNKFEKPRAVIFDESESN 799 (1436)
Q Consensus 720 ~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~lig~~v~f~i~~~~~L~~~~~~~~~~~~~~~~~~~~ 799 (1436)
.
T Consensus 250 ----------------------------------------------------------------~--------------- 250 (506)
T PRK13549 250 ----------------------------------------------------------------R--------------- 250 (506)
T ss_pred ----------------------------------------------------------------c---------------
Confidence 0
Q ss_pred cccccCCCcccCCCCCCCCccccCCCCCCCccccccccCCCccchhhHHHhhhhhccCccccCCCceeEEeceeeeeecc
Q 038815 800 EKDNRTGGTLQSSTSGSSSSLRTRSGESGDYIWERSSSMSSSVTETAVEIRNLIRKKGMVLPFEPHSLTFDEVVYSVDMP 879 (1436)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 879 (1436)
. . . . + ....+.++|+++.++.
T Consensus 251 -------~-----~------------------------~--------~-------------~-~~~~l~~~~l~~~~~~- 271 (506)
T PRK13549 251 -------E-----P------------------------H--------T-------------I-GEVILEVRNLTAWDPV- 271 (506)
T ss_pred -------c-----c------------------------c--------C-------------C-CCceEEEecCcccccc-
Confidence 0 0 0 0 0 0001344455443210
Q ss_pred cchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc----ccccceEE
Q 038815 880 QEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ----ETFTRISG 955 (1436)
Q Consensus 880 ~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~----~~~~~~~g 955 (1436)
.+++.+|+|||+.|++||++||+||||||||||+++|+|...+ +.+|+|.++|.+... ...++.+|
T Consensus 272 ---------~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~ 341 (506)
T PRK13549 272 ---------NPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIA 341 (506)
T ss_pred ---------ccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCE
Confidence 0123589999999999999999999999999999999997541 147999999976532 12345689
Q ss_pred EeccCC---CCCCCCCHHHHHHHhhhhcCC--CCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHH
Q 038815 956 YCEQND---IHSPLVTVYESLLYSAWLRLP--PEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTI 1029 (1436)
Q Consensus 956 yv~Q~d---~~~~~lTv~E~l~f~a~lr~~--~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~i 1029 (1436)
|++|+. .+++.+||.|++.+....... ...+.++..+.++++++.+++. +..+..+ ..|||||||||+|
T Consensus 342 ~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~l 416 (506)
T PRK13549 342 MVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVL 416 (506)
T ss_pred EeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHH
Confidence 999985 467889999999875321111 0112333445688999999996 4666654 5799999999999
Q ss_pred HHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1030 AVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1030 a~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++-+..|+
T Consensus 417 A~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~ 474 (506)
T PRK13549 417 AKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDR 474 (506)
T ss_pred HHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999888999999999974 56677787
No 18
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-58 Score=576.48 Aligned_cols=214 Identities=24% Similarity=0.268 Sum_probs=168.6
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc----cceEEEE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP----QRVAAYI 244 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv 244 (1436)
+++.++++++++|+|+|++|++||+++|+||||||||||||+|+|.++|+ +|+|.++|+++..... ++.++|+
T Consensus 9 ~~l~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v 85 (510)
T PRK09700 9 AGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGII 85 (510)
T ss_pred eeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEE
Confidence 34455555567999999999999999999999999999999999999887 9999999998765432 2469999
Q ss_pred cCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccc
Q 038815 245 SQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDIC 324 (1436)
Q Consensus 245 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 324 (1436)
+|++.+++.+||+||+.++...... .+.. .... ..+....++.+++.+||++.
T Consensus 86 ~q~~~~~~~~tv~e~l~~~~~~~~~--~~~~-~~~~------------------------~~~~~~~~~~~l~~~gl~~~ 138 (510)
T PRK09700 86 YQELSVIDELTVLENLYIGRHLTKK--VCGV-NIID------------------------WREMRVRAAMMLLRVGLKVD 138 (510)
T ss_pred eecccccCCCcHHHHhhhccccccc--cccc-cccC------------------------HHHHHHHHHHHHHHcCCCCC
Confidence 9999899999999999875321000 0000 0000 00112235678999999876
Q ss_pred ccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 038815 325 ADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDL 399 (1436)
Q Consensus 325 ~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~l 399 (1436)
.+..+ +.|||||||||+||+++ +|+|||||+|||+.++.++.+.|+++++ .+ ++|+.++|+..++.++
T Consensus 139 ~~~~~-----~~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g-~tiiivsHd~~~~~~~ 211 (510)
T PRK09700 139 LDEKV-----ANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-EG-TAIVYISHKLAEIRRI 211 (510)
T ss_pred cccch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHh
Confidence 66544 57999999999998776 5999999999999999999999999865 34 4556688999999999
Q ss_pred cCeEEEecCCeEEEecChHH
Q 038815 400 FDDIILLSDGLIVYLGPREL 419 (1436)
Q Consensus 400 fD~vilL~~G~iv~~G~~~~ 419 (1436)
+|+|++|++|++++.|++++
T Consensus 212 ~d~v~~l~~G~i~~~g~~~~ 231 (510)
T PRK09700 212 CDRYTVMKDGSSVCSGMVSD 231 (510)
T ss_pred CCEEEEEECCEEeeecchhh
Confidence 99999999999998886643
No 19
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.5e-58 Score=573.60 Aligned_cols=209 Identities=22% Similarity=0.319 Sum_probs=166.9
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc----cceEEEE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP----QRVAAYI 244 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv 244 (1436)
+++.+++.++++|+|+|++|++||+++|+||||||||||||+|+|.++|+ +|+|.++|.++..... ++.++|+
T Consensus 8 ~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v 84 (501)
T PRK10762 8 KGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGII 84 (501)
T ss_pred eeeEEEeCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEE
Confidence 34444555567999999999999999999999999999999999999987 9999999988754321 3469999
Q ss_pred cCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccc
Q 038815 245 SQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDIC 324 (1436)
Q Consensus 245 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 324 (1436)
+|++.+++.+||+||+.++........ .... .+....++++++.+||++.
T Consensus 85 ~q~~~~~~~~tv~e~l~~~~~~~~~~~------~~~~------------------------~~~~~~~~~~l~~~~l~~~ 134 (501)
T PRK10762 85 HQELNLIPQLTIAENIFLGREFVNRFG------RIDW------------------------KKMYAEADKLLARLNLRFS 134 (501)
T ss_pred EcchhccCCCcHHHHhhhccccccccC------ccCH------------------------HHHHHHHHHHHHHcCCCCC
Confidence 999989999999999998643210000 0000 0112235678999999876
Q ss_pred ccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 038815 325 ADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDL 399 (1436)
Q Consensus 325 ~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~l 399 (1436)
.+..+ ..|||||||||+||+++ +|+|||||+|||+.++.++.+.|+++.+ . +++||.++|+.+++.++
T Consensus 135 ~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~ 207 (501)
T PRK10762 135 SDKLV-----GELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEI 207 (501)
T ss_pred ccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHh
Confidence 66544 46999999999998776 4999999999999999999999999864 3 45566688999999999
Q ss_pred cCeEEEecCCeEEEecCh
Q 038815 400 FDDIILLSDGLIVYLGPR 417 (1436)
Q Consensus 400 fD~vilL~~G~iv~~G~~ 417 (1436)
||+|++|++|+++..|+.
T Consensus 208 ~d~i~~l~~G~i~~~~~~ 225 (501)
T PRK10762 208 CDDVTVFRDGQFIAEREV 225 (501)
T ss_pred CCEEEEEeCCEEEEecCc
Confidence 999999999999987754
No 20
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-58 Score=598.33 Aligned_cols=211 Identities=24% Similarity=0.304 Sum_probs=168.6
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..++|+|++..+.- +-..+|||||+.|+|||++||+|++|||||||+++|.+..+ +.+|+|.|||.+
T Consensus 1137 G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G~I~IDgvd 1203 (1381)
T KOG0054|consen 1137 GEIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEGEILIDGVD 1203 (1381)
T ss_pred CeEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCCeEEEcCee
Confidence 47999999876642 23579999999999999999999999999999999998776 367999999998
Q ss_pred ccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccC------CCC
Q 038815 945 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVG------LPG 1015 (1436)
Q Consensus 945 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg------~~~ 1015 (1436)
+.+ ...|+.++.+|||+.+|. -|||+||. +..+..++.+.++||..+|.+....+.+ .++
T Consensus 1204 I~~igL~dLRsrlsIIPQdPvLFs-GTvR~NLD----------Pf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~eg 1272 (1381)
T KOG0054|consen 1204 ISKIGLHDLRSRLSIIPQDPVLFS-GTVRFNLD----------PFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEG 1272 (1381)
T ss_pred cccccHHHHHhcCeeeCCCCceec-CccccccC----------cccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCC
Confidence 754 567889999999999986 48888883 3334445667888888888765433222 134
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhhc---CC
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEAI---PG 1092 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~~---~g 1092 (1436)
..++|.||||.+|+||||+++++||+|||+|+++|+++...|+++||+..+ ++|||++.|.-+.- ---|+.. .|
T Consensus 1273 G~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~TV--md~DrVlVld~G 1349 (1381)
T KOG0054|consen 1273 GENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLNTV--MDSDRVLVLDAG 1349 (1381)
T ss_pred CccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccchh--hhcCeEEEeeCC
Confidence 578999999999999999999999999999999999999999999999765 89999999987642 2335521 33
Q ss_pred cccCCCCCCccc
Q 038815 1093 VQKIKDGCNPAT 1104 (1436)
Q Consensus 1093 ~~~~~~~~NPAd 1104 (1436)
+.-+...|++
T Consensus 1350 --~v~EfdsP~~ 1359 (1381)
T KOG0054|consen 1350 --RVVEFDSPAE 1359 (1381)
T ss_pred --eEeecCChHH
Confidence 3455566654
No 21
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.5e-56 Score=613.90 Aligned_cols=196 Identities=23% Similarity=0.305 Sum_probs=163.3
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..++|+|+++.++. +.+.+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEe
Confidence 36999999988741 12469999999999999999999999999999999999866 457999999988
Q ss_pred ccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-------ccccccCCC
Q 038815 945 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-------LRQSLVGLP 1014 (1436)
Q Consensus 945 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 1014 (1436)
... ..+|+.++||||++.++.. |+||||.+.. ..+ ++.+.++++..++.+ -.|+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCC----HHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 653 4678899999999999875 9999996531 122 234667777777654 346667654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1015 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1015 ~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
| .+||||||||++|||||+++|+||+||||||+||+.+...|+++|++.. +++|||+++|+++. ...+|+
T Consensus 1372 G-~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~t--I~~~Dr 1441 (1622)
T PLN03130 1372 G-ENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT--IIDCDR 1441 (1622)
T ss_pred C-CCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChHH--HHhCCE
Confidence 3 5899999999999999999999999999999999999999999999875 48999999999864 456898
No 22
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.2e-57 Score=566.84 Aligned_cols=203 Identities=22% Similarity=0.327 Sum_probs=167.8
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc----cceEEEE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP----QRVAAYI 244 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv 244 (1436)
+++..++.++.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|+
T Consensus 15 ~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v 91 (510)
T PRK15439 15 RSISKQYSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLV 91 (510)
T ss_pred EeEEEEeCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 34455555667999999999999999999999999999999999999987 9999999988754432 2458999
Q ss_pred cCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccc
Q 038815 245 SQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDIC 324 (1436)
Q Consensus 245 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 324 (1436)
+|++.+++.+||+||+.|..... + +....++.+++.+||++.
T Consensus 92 ~q~~~~~~~~tv~e~l~~~~~~~-------------~-------------------------~~~~~~~~~l~~~~l~~~ 133 (510)
T PRK15439 92 PQEPLLFPNLSVKENILFGLPKR-------------Q-------------------------ASMQKMKQLLAALGCQLD 133 (510)
T ss_pred eccCccCCCCcHHHHhhcccccc-------------h-------------------------HHHHHHHHHHHHcCCCcc
Confidence 99999999999999998853100 0 011234668899999876
Q ss_pred ccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 038815 325 ADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDL 399 (1436)
Q Consensus 325 ~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~l 399 (1436)
.+.. +..|||||||||+||+++ +|+|||||+|||+.++.++.+.|+++++ . +++||.++|+.+++.++
T Consensus 134 ~~~~-----~~~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~ 206 (510)
T PRK15439 134 LDSS-----AGSLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQL 206 (510)
T ss_pred ccCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHh
Confidence 6654 457999999999998776 4999999999999999999999999865 3 45566688999999999
Q ss_pred cCeEEEecCCeEEEecChHH
Q 038815 400 FDDIILLSDGLIVYLGPREL 419 (1436)
Q Consensus 400 fD~vilL~~G~iv~~G~~~~ 419 (1436)
||+|++|++|++++.|+.++
T Consensus 207 ~d~i~~l~~G~i~~~g~~~~ 226 (510)
T PRK15439 207 ADRISVMRDGTIALSGKTAD 226 (510)
T ss_pred CCEEEEEECCEEEEecChHH
Confidence 99999999999999987654
No 23
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=3.1e-57 Score=568.01 Aligned_cols=185 Identities=24% Similarity=0.345 Sum_probs=152.5
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEc-Cee---ccc------ccccceEEEeccCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITIS-GYL---KKQ------ETFTRISGYCEQND 961 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~-g~~---~~~------~~~~~~~gyv~Q~d 961 (1436)
+.+|+|+|+.|++||++||+||||||||||+++|+|..+ +.+|+|.++ |.. ... ...++.+||++|+.
T Consensus 297 ~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~ 374 (520)
T TIGR03269 297 VKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEY 374 (520)
T ss_pred ceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCc
Confidence 469999999999999999999999999999999999865 347999996 532 111 12345689999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-----ccccccCCCCCCCCCHHHHHHHHHHHHHhhC
Q 038815 962 IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-----LRQSLVGLPGVSGLSTEQRKRLTIAVELVAN 1036 (1436)
Q Consensus 962 ~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-----~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~ 1036 (1436)
.+++.+||+|++.+...+. .+.+..++.++++++.++|.+ ..+.. +..|||||||||+||++|+.+
T Consensus 375 ~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LSgGq~qrv~laral~~~ 445 (520)
T TIGR03269 375 DLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELSEGERHRVALAQVLIKE 445 (520)
T ss_pred ccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCCHHHHHHHHHHHHHhcC
Confidence 8889999999998754321 122333456889999999975 34544 467999999999999999999
Q ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1037 PSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1037 p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|++|+|||||+|||+.+...+++.|++++++ |.|||+++|++. .+.+..|+
T Consensus 446 p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~ 497 (520)
T TIGR03269 446 PRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDR 497 (520)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999765 899999999975 46667787
No 24
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.9e-57 Score=567.64 Aligned_cols=190 Identities=19% Similarity=0.319 Sum_probs=155.3
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc----ccccceEEEeccCC---CCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ----ETFTRISGYCEQND---IHS 964 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d---~~~ 964 (1436)
+.+|+|+|+.+++||++||+|||||||||||++|+|..++ ..+|+|.++|.+... ...++.+||++|+. .++
T Consensus 273 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~ 351 (500)
T TIGR02633 273 RKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIV 351 (500)
T ss_pred ccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcC
Confidence 3589999999999999999999999999999999998642 137999999976532 12356789999995 578
Q ss_pred CCCCHHHHHHHhhh--hcCCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 038815 965 PLVTVYESLLYSAW--LRLPPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1041 (1436)
Q Consensus 965 ~~lTv~E~l~f~a~--lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~ 1041 (1436)
+.+||+|++.+... ............++.++++++.+++.+ ..+..+ ..|||||||||+||++|+.+|++|+
T Consensus 352 ~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lll 426 (500)
T TIGR02633 352 PILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLI 426 (500)
T ss_pred CCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEE
Confidence 88999999987532 111011223334566889999999964 456653 5799999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1042 MDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1042 lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||+|||..++..+++.|++++++|.|||+++|++. ++-+..|+
T Consensus 427 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~ 472 (500)
T TIGR02633 427 LDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDR 472 (500)
T ss_pred EcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 99999999999999999999999888999999999975 46666777
No 25
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-57 Score=575.02 Aligned_cols=211 Identities=21% Similarity=0.211 Sum_probs=166.0
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+...... . ....+...+|+|||+.|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 313 ~L~~~~l~~~y~~~~~~-~-~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i 388 (623)
T PRK10261 313 ILQVRNLVTRFPLRSGL-L-NRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRI 388 (623)
T ss_pred eEEEeeeEEEEcCCCcc-c-cccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEEC
Confidence 36777887665321000 0 000012469999999999999999999999999999999999865 3579999999765
Q ss_pred cc------ccccceEEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 038815 946 KQ------ETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGV 1016 (1436)
Q Consensus 946 ~~------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 1016 (1436)
.. ..+++.++||+|+. .+++.+||.|++.+....+. ....++..++++++++.+||. +..+.. +
T Consensus 389 ~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~ 461 (623)
T PRK10261 389 DTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----P 461 (623)
T ss_pred CcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----c
Confidence 32 12456799999996 57889999999987644321 112344556788999999996 455655 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1017 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1017 ~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
..|||||||||+||++|+.+|++|+|||||+|||..++..|++.|++++++ |.|||+++|+++ .+.+..|+
T Consensus 462 ~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dr 533 (623)
T PRK10261 462 HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHR 533 (623)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 679999999999999999999999999999999999999999999999875 899999999975 45667787
No 26
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.4e-57 Score=617.50 Aligned_cols=195 Identities=22% Similarity=0.288 Sum_probs=162.9
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++|+|+++.++. +.+.+|+|||++|+|||.+||+|+||||||||+++|.|..+ +.+|+|.+||.+.
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEEh
Confidence 6999999988741 22469999999999999999999999999999999999876 4579999999886
Q ss_pred cc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCCC
Q 038815 946 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLPG 1015 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 1015 (1436)
.+ ..+|+.++||||++.+++. |+||||.+.. +.++ +.++++++..++.+. .|+.+|..|
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~sd----eei~~al~~a~l~~~I~~lp~GLdt~v~e~G 1369 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHND----ADLWEALERAHIKDVIDRNPFGLDAEVSEGG 1369 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCCH----HHHHHHHHHcCCHHHHHhCcCCCCceecCCC
Confidence 53 4578899999999999874 9999996531 1222 346677777777543 356676543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....+|+
T Consensus 1370 -~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~Dr 1438 (1495)
T PLN03232 1370 -ENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDK 1438 (1495)
T ss_pred -CCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCE
Confidence 5799999999999999999999999999999999999999999999875 4899999999984 3456898
No 27
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=7.4e-57 Score=565.37 Aligned_cols=187 Identities=25% Similarity=0.302 Sum_probs=154.9
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc------cccceEEEeccCC--CC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE------TFTRISGYCEQND--IH 963 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~d--~~ 963 (1436)
+.+|+|||+.+++||++||+||||||||||+++|+|..+ .+|+|.++|.+.... .+++.+||++|+. .+
T Consensus 299 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l 375 (529)
T PRK15134 299 NVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSL 375 (529)
T ss_pred ceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhc
Confidence 469999999999999999999999999999999999763 479999999765321 1345699999996 47
Q ss_pred CCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 038815 964 SPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1042 (1436)
Q Consensus 964 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~l 1042 (1436)
++.+||+|++.+....+.. ..+..+.++.++++++.++|. +..+.. +..|||||||||+||++|+.+|++|+|
T Consensus 376 ~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llll 449 (529)
T PRK15134 376 NPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLIIL 449 (529)
T ss_pred CCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 7889999999886543211 122334456788999999997 456655 357999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1043 DEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1043 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||+|||+.++..+++.|++++++ |+|||+++|++. .+-+..|+
T Consensus 450 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~ 495 (529)
T PRK15134 450 DEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQ 495 (529)
T ss_pred eCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCe
Confidence 9999999999999999999999875 899999999975 35566777
No 28
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-57 Score=563.40 Aligned_cols=187 Identities=20% Similarity=0.326 Sum_probs=153.4
Q ss_pred EeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc----ccccceEEEeccCC---CCCCC
Q 038815 894 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ----ETFTRISGYCEQND---IHSPL 966 (1436)
Q Consensus 894 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d---~~~~~ 966 (1436)
+++|+|+.+++||++||+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|+. .+++.
T Consensus 268 ~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 345 (501)
T PRK11288 268 LREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPV 345 (501)
T ss_pred cccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCC
Confidence 7999999999999999999999999999999999865 357999999976432 12345789999985 47888
Q ss_pred CCHHHHHHHhhhhcC-CCC--CCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 038815 967 VTVYESLLYSAWLRL-PPE--VDSETRKMFIEEIMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1042 (1436)
Q Consensus 967 lTv~E~l~f~a~lr~-~~~--~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~l 1042 (1436)
+||.|++.+...... +.. ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|++|+|
T Consensus 346 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllL 420 (501)
T PRK11288 346 HSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILL 420 (501)
T ss_pred CCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEE
Confidence 999999987532111 000 11223345678999999994 6677764 57999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1043 DEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1043 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||+|||..+...+++.|+++++.|.|||+++|++. ++.+..|+
T Consensus 421 DEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~ 465 (501)
T PRK11288 421 DEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADR 465 (501)
T ss_pred cCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCE
Confidence 9999999999999999999999888999999999974 45566777
No 29
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.3e-55 Score=600.96 Aligned_cols=196 Identities=18% Similarity=0.215 Sum_probs=163.2
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..++|+|+++.++. +...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1283 g~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 46999999998752 12359999999999999999999999999999999999766 457999999998
Q ss_pred ccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCC
Q 038815 945 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLP 1014 (1436)
Q Consensus 945 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 1014 (1436)
... ..+|+.++||||++.+++. |+||||.... +.++ +.+.++++..++.+. .|+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~sd----eei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYSD----EEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCCH----HHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 654 4578899999999999975 9999995211 1222 336777888777643 36666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1015 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1015 ~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
| .+||||||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....+|+
T Consensus 1419 G-~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~Dr 1488 (1522)
T TIGR00957 1419 G-ENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTR 1488 (1522)
T ss_pred C-CcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCE
Confidence 3 5799999999999999999999999999999999999999999999875 4899999999975 4556888
No 30
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-56 Score=552.54 Aligned_cols=203 Identities=22% Similarity=0.316 Sum_probs=163.3
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc----cceEEEEcCCCC
Q 038815 174 RKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP----QRVAAYISQHDN 249 (1436)
Q Consensus 174 ~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~ 249 (1436)
+++++++|+|||+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.
T Consensus 7 ~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~ 83 (491)
T PRK10982 7 SFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELN 83 (491)
T ss_pred EeCCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccc
Confidence 344567999999999999999999999999999999999999887 9999999998754322 356999999998
Q ss_pred CCCCCCHHHHHHhhhhh-ccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccc
Q 038815 250 HIGEMTVRETLAFSARC-QGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTL 328 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 328 (1436)
+++.+||+||+.++... .+.. ... .+....++.+++.+||++..+..
T Consensus 84 ~~~~~tv~~~l~~~~~~~~~~~--------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~ 131 (491)
T PRK10982 84 LVLQRSVMDNMWLGRYPTKGMF--------VDQ------------------------DKMYRDTKAIFDELDIDIDPRAK 131 (491)
T ss_pred cccCCCHHHHhhcccccccccc--------cCH------------------------HHHHHHHHHHHHHcCCCCCccCc
Confidence 89999999999875311 0000 000 00112356788999998766554
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
+..|||||||||+||+++ +|+|||||+|||+.+..++.+.|+++++ . +.+|+.++|+.+++.++||+|
T Consensus 132 -----~~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tvii~tH~~~~~~~~~d~i 204 (491)
T PRK10982 132 -----VATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-R-GCGIVYISHKMEEIFQLCDEI 204 (491)
T ss_pred -----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEE
Confidence 457999999999998766 5999999999999999999999999864 3 445566788999999999999
Q ss_pred EEecCCeEEEecChH
Q 038815 404 ILLSDGLIVYLGPRE 418 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~ 418 (1436)
++|++|+++..|+++
T Consensus 205 ~~l~~G~i~~~~~~~ 219 (491)
T PRK10982 205 TILRDGQWIATQPLA 219 (491)
T ss_pred EEEECCEEEeecChh
Confidence 999999999877553
No 31
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2e-54 Score=592.31 Aligned_cols=197 Identities=24% Similarity=0.261 Sum_probs=164.8
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..+.|+||++.++. +...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 36999999998752 22459999999999999999999999999999999999876 457999999998
Q ss_pred ccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCC
Q 038815 945 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLP 1014 (1436)
Q Consensus 945 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 1014 (1436)
+.. ..+++.+|||||++.++.. ||||||... .+.+ ++.++++++..+|.+. .|+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 653 4678899999999999874 999999531 1222 2347788888888654 46677764
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhh
Q 038815 1015 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1015 ~~~~lSgGqrkRl~ia~~L~~~-p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
| .+||||||||++|||||+++ |+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....+|+.
T Consensus 1443 G-~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrI 1514 (1560)
T PTZ00243 1443 G-SNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKI 1514 (1560)
T ss_pred c-CcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEE
Confidence 3 58999999999999999996 89999999999999999999999999864 4899999999974 56788983
No 32
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.6e-55 Score=545.81 Aligned_cols=194 Identities=20% Similarity=0.331 Sum_probs=150.6
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+. ++.+|+|+|+.+++||+++|+||||||||||+++|+|.... ..+|+|.++|.+.
T Consensus 260 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~ 325 (490)
T PRK10938 260 RIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRR 325 (490)
T ss_pred eEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccC
Confidence 367777776542 24699999999999999999999999999999999996431 1479999999754
Q ss_pred cc----ccccceEEEeccCCCCCC--CCCHHHHHHHhhhh--cCCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCC
Q 038815 946 KQ----ETFTRISGYCEQNDIHSP--LVTVYESLLYSAWL--RLPPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGV 1016 (1436)
Q Consensus 946 ~~----~~~~~~~gyv~Q~d~~~~--~lTv~E~l~f~a~l--r~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 1016 (1436)
.. ...++.+||++|++.+.. ..|+++.+.+...- ....... .+.++.++++++.++|.+ ..+.. +
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~-----~ 399 (490)
T PRK10938 326 GSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAP-----F 399 (490)
T ss_pred CCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCc-----h
Confidence 21 123467999999865543 35677766543210 1111111 223456889999999987 66765 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCC-EEEEEecCCC
Q 038815 1017 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGR-TVVCTIHQPS 1079 (1436)
Q Consensus 1017 ~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~-tvi~t~Hqps 1079 (1436)
..|||||||||+||++|+.+|++|+|||||+|||+.+...+++.|++++++|. |||+++|++.
T Consensus 400 ~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~ 463 (490)
T PRK10938 400 HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE 463 (490)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh
Confidence 57999999999999999999999999999999999999999999999987764 7999999975
No 33
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1e-53 Score=585.53 Aligned_cols=209 Identities=19% Similarity=0.216 Sum_probs=170.0
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..++|+||++.++. +.+.+|+|||+.|+|||++||+|+||||||||+++|+|..+ .+|+|.+||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 36999999998752 12569999999999999999999999999999999999864 47999999988
Q ss_pred ccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCC
Q 038815 945 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLP 1014 (1436)
Q Consensus 945 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 1014 (1436)
... ..+++.++||||++.+++. ||||||.... ..+ ++.+.++++.++|.+. .|+.+|..
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~~t----deei~~aL~~~~L~~~i~~lp~GLdt~v~e~ 1350 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------QWS----DEEIWKVAEEVGLKSVIEQFPDKLDFVLVDG 1350 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------CCC----HHHHHHHHHHCCCHHHHHhCccccccccccC
Confidence 753 4578899999999999974 9999994321 112 3457788888888543 46667654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhhc---C
Q 038815 1015 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEAI---P 1091 (1436)
Q Consensus 1015 ~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~~---~ 1091 (1436)
..+||||||||++|||||+++|+||+||||||+||..+...|++.|++..+ ++|||+++|+++ ....+|+.+ +
T Consensus 1351 -G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~-~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1351 -GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFS-NCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred -CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999998754 799999999974 456799833 3
Q ss_pred CcccCCCCCCccc
Q 038815 1092 GVQKIKDGCNPAT 1104 (1436)
Q Consensus 1092 g~~~~~~~~NPAd 1104 (1436)
| ++-+.-+|.+
T Consensus 1427 G--~ivE~g~p~~ 1437 (1490)
T TIGR01271 1427 S--SVKQYDSIQK 1437 (1490)
T ss_pred C--EEEEeCCHHH
Confidence 4 2344455654
No 34
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-52 Score=526.56 Aligned_cols=183 Identities=18% Similarity=0.247 Sum_probs=149.8
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.++ ++.+|+|+|+.|++||+++|+|||||||||||++|+|... +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 478888887653 2469999999999999999999999999999999999765 34799999873
Q ss_pred ccccccceEEEeccCCC--CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHH
Q 038815 946 KQETFTRISGYCEQNDI--HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVSGLSTE 1022 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgG 1022 (1436)
+.+||++|+.. +.+.+||+|++.+.. ... ..++.++++++.+++. +..+.. +..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~~-----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QEG-----DDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cCC-----ccHHHHHHHHHHcCCChhHhcCc-----ccccCHH
Confidence 46899999863 456789999986421 111 1134578899999994 556655 3579999
Q ss_pred HHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1023 qrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||+||++|+.+|++|+|||||+|||+.+...+++.|+++ +.|||+++|++. .+-+..|+
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~ 504 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATR 504 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999886 459999999975 45555676
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.4e-52 Score=524.99 Aligned_cols=186 Identities=21% Similarity=0.275 Sum_probs=150.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.+. ++.+|+|||+.|++||+++|+||||||||||+++|+|... +.+|+|.+++.
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGET-- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 478888887652 3569999999999999999999999999999999999765 35799998542
Q ss_pred ccccccceEEEeccCC-CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHH
Q 038815 946 KQETFTRISGYCEQND-IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGVSGLSTEQ 1023 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGq 1023 (1436)
..+||++|+. .+++.+||+|++.+....+.. ... ...++++++.+++.+ ..+.. +..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~---~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKV---GNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhcccccc---ccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999986 677889999999876432211 111 123457899999964 44555 35799999
Q ss_pred HHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1024 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1024 rkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||+||++|+.+|++|+|||||+|||+.+...+++.|+++. .|||+++|++. .+-+..|+
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~tvi~vtHd~~-~~~~~~d~ 511 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP---GCAVVISHDRW-FLDRIATH 511 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC---CeEEEEECCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999872 48999999975 45556676
No 36
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=2.4e-51 Score=517.32 Aligned_cols=186 Identities=20% Similarity=0.277 Sum_probs=149.8
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+. ++.+|+|||+.|++|++++|+|||||||||||++|+|... +.+|+|.+++.
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--
Confidence 477888876542 3469999999999999999999999999999999999865 35799998542
Q ss_pred ccccccceEEEeccCC-CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHH
Q 038815 946 KQETFTRISGYCEQND-IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGVSGLSTEQ 1023 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGq 1023 (1436)
..+||++|+. .+++.+||+|++.+....+. .... ...++++++.+++.+ ..+.. +..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKK-----VGQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1589999985 47788999999987643211 1111 123557899999964 45555 35799999
Q ss_pred HHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1024 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1024 rkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||+||++|+.+|++|+|||||+|||..+...+++.|+++ +.|||+++|++. .+-+..|+
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~~viivsHd~~-~~~~~~d~ 509 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF---AGCAVVISHDRW-FLDRIATH 509 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC---CCeEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999987 248999999974 45555676
No 37
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=6.7e-51 Score=454.75 Aligned_cols=450 Identities=25% Similarity=0.313 Sum_probs=339.7
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCCCcc-------ceEEEEcC
Q 038815 176 KHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEFEPQ-------RVAAYISQ 246 (1436)
Q Consensus 176 ~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~~~~-------~~~~yv~Q 246 (1436)
....+++||||.|++||.++|+|.||||||-..+.+.|+++.. ...+|+|.|+|.++-....+ ..+++++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 4678999999999999999999999999999999999998763 35689999999997544322 36899999
Q ss_pred CC--CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccc
Q 038815 247 HD--NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDIC 324 (1436)
Q Consensus 247 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 324 (1436)
++ .+.|-.|+...|.-..+++.. +++ ..++.++.++|+..|+++.
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------~~~------------------------~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------LSR------------------------AAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------ccH------------------------HHHHHHHHHHHHHcCCCch
Confidence 97 567878888888776665421 111 1234456778999999876
Q ss_pred ccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 038815 325 ADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDL 399 (1436)
Q Consensus 325 ~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~l 399 (1436)
...+ ++++.+|||||||||.||.|+ +|+-||||++||.....+|++.|+++.... +..++.++|+..-+-++
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~-gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAEL-GMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHh-CcEEEEEeccHHHHHHh
Confidence 5433 678999999999999997665 599999999999999999999999987765 45666699999999999
Q ss_pred cCeEEEecCCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHHhhcChhhhhhHhhhccccccccCHHHHHHHHHhchhh
Q 038815 400 FDDIILLSDGLIVYLGPRELVLDFFESMGFKCPERKGVADFLQEVTSRKDQQQYWAHKEMRYRFVTVQEFCEAFQSFHVG 479 (1436)
Q Consensus 400 fD~vilL~~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~ef~~~f~~s~~~ 479 (1436)
+|+|+||.+|+++++|+++.+.. .|.+ ||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH-----------------
Confidence 99999999999999998876531 1110 000
Q ss_pred HHHHHHhcCCCCCCCCCcccccCCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhheeeeccCCCCcc
Q 038815 480 QKLTAELRTPFDKSKSHPAALSMKEYGVGKKELLKANISREFLLMKRNSFVYIFKLTQLSTVAMVSMSLFFRTKMPKDSV 559 (1436)
Q Consensus 480 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~gslf~~~~~~~~~~ 559 (1436)
+.+.+. +|...
T Consensus 255 r~Ll~a--eP~g~------------------------------------------------------------------- 265 (534)
T COG4172 255 RKLLAA--EPSGD------------------------------------------------------------------- 265 (534)
T ss_pred HHHHhc--CCCCC-------------------------------------------------------------------
Confidence 000000 00000
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhcCCccchHhHHHHHHHHHhhHHHHHHHHHHhhhhhhccccc
Q 038815 560 NDGGIYIGASFFAVMMTMFNGMSDISMTIAKLPVFYKQRDLRFYPAWSYALPAWIVKIPISFLEVAAWVFLTYYVIGFDP 639 (1436)
Q Consensus 560 ~~~~~~~g~lff~~l~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~ 639 (1436)
T Consensus 266 -------------------------------------------------------------------------------- 265 (534)
T COG4172 266 -------------------------------------------------------------------------------- 265 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccchhhhHHHhHhhChHHHHHHHH
Q 038815 640 NVGRFFKQYLLLLFVNQMATALFRFIGAAGRNMIVAMSFGSFALLMLFALGGFVLSRDDINKWWIWGYWCSPMMYAQNAI 719 (1436)
Q Consensus 640 ~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~i~~w~~W~~~isP~~ya~~al 719 (1436)
T Consensus 266 -------------------------------------------------------------------------------- 265 (534)
T COG4172 266 -------------------------------------------------------------------------------- 265 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcCCccccccCCCccchhHHhhcccCcccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceeeecCcccc
Q 038815 720 VANEFLGHSWRKFTTNSNESLGVQALKSRGFFPHAYWYWLGLGAVIGFLLVFNVGFTLSLTFLNKFEKPRAVIFDESESN 799 (1436)
Q Consensus 720 ~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~lig~~v~f~i~~~~~L~~~~~~~~~~~~~~~~~~~~ 799 (1436)
T Consensus 266 -------------------------------------------------------------------------------- 265 (534)
T COG4172 266 -------------------------------------------------------------------------------- 265 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCcccCCCCCCCCccccCCCCCCCccccccccCCCccchhhHHHhhhhhccCccccCCCceeEEeceeeeeecc
Q 038815 800 EKDNRTGGTLQSSTSGSSSSLRTRSGESGDYIWERSSSMSSSVTETAVEIRNLIRKKGMVLPFEPHSLTFDEVVYSVDMP 879 (1436)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 879 (1436)
+ ... .+..+.-+.-+|+....+.+
T Consensus 266 -------------~----~p~---------------------------------------~~~~~~ll~~~~v~v~f~i~ 289 (534)
T COG4172 266 -------------P----PPL---------------------------------------PEDAPVLLEVEDLRVWFPIK 289 (534)
T ss_pred -------------C----CCC---------------------------------------CCCCCceEEecceEEEEecC
Confidence 0 000 00001122223333222222
Q ss_pred cchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc------cccce
Q 038815 880 QEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE------TFTRI 953 (1436)
Q Consensus 880 ~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~------~~~~~ 953 (1436)
... .....+...++++||+..++||.++|+|.||||||||=.+|.+... .+|+|.++|.++... ..++.
T Consensus 290 ~g~--~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~---s~G~I~F~G~~i~~~~~~~mrplR~~ 364 (534)
T COG4172 290 GGF--LRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIP---SQGEIRFDGQDIDGLSRKEMRPLRRR 364 (534)
T ss_pred Ccc--ccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcC---cCceEEECCccccccChhhhhhhhhh
Confidence 111 0001123578999999999999999999999999999999998765 349999999876532 35678
Q ss_pred EEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHH
Q 038815 954 SGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIA 1030 (1436)
Q Consensus 954 ~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~lSgGqrkRl~ia 1030 (1436)
+-.|+||+ .+.|.+||.|-+.=+.....| ..+..+|+++|.++|+.+||++- .+.. +.++|||||||++||
T Consensus 365 mQvVFQDPygSLsPRmtV~qII~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIA 438 (534)
T COG4172 365 MQVVFQDPYGSLSPRMTVGQIIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIA 438 (534)
T ss_pred ceEEEeCCCCCCCcccCHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHH
Confidence 89999997 578999999998766555544 46788999999999999999873 2332 578999999999999
Q ss_pred HHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1031 VELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1031 ~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+-+|++++||||||.||-.-+.+|+++||++.+ .|.+-++++||.. -+=.+.|+
T Consensus 439 RAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~ 496 (534)
T COG4172 439 RALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHR 496 (534)
T ss_pred HHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhce
Confidence 999999999999999999999999999999999975 4999999999964 23334454
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=9.9e-51 Score=509.23 Aligned_cols=183 Identities=22% Similarity=0.240 Sum_probs=152.0
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+. +. .|+++|+.+++||++||+||||||||||+++|+|..+ +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~~-~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------DF-SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------CE-EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 366777765432 22 4899999999999999999999999999999999865 347999875
Q ss_pred ccccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 038815 946 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 1025 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1025 (1436)
..+||++|+..+.+.+||+|++.+.... ... ...++++++.++|.+..+..+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 1489999998888889999999874211 111 124688999999988777764 579999999
Q ss_pred HHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1026 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1026 Rl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||+||++|+.+|++|+|||||+|||..++..+++.|++++++ |.|||+++|++. .+...-|+
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDr 523 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDR 523 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999874 899999999975 35555677
No 39
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-49 Score=506.17 Aligned_cols=182 Identities=21% Similarity=0.325 Sum_probs=146.2
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.+. ++.+|+|+|+.|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 467788877652 3569999999999999999999999999999999999865 35799998741
Q ss_pred ccccccceEEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHH
Q 038815 946 KQETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGVSGLSTE 1022 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgG 1022 (1436)
..+||++|+. .+.+..|+.+++.- . .. ......+.++++.+++.. ..+..+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34456677776531 1 11 112345788999999963 556554 579999
Q ss_pred HHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1023 qrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||+||++|+.+|++|+|||||+|||..+...+.+.|+++ +.|||+++|++. .+-...|+
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~ 496 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDD 496 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999987 359999999974 45566777
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.5e-49 Score=507.48 Aligned_cols=186 Identities=24% Similarity=0.314 Sum_probs=148.7
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.+. ++.+|+|+|+.|++|+++||+|||||||||||++|+|... +.+|+|.+ |..
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~- 381 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTK- 381 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCC-
Confidence 467788876542 3569999999999999999999999999999999999765 35799988 422
Q ss_pred ccccccceEEEeccCC-CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHH
Q 038815 946 KQETFTRISGYCEQND-IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVSGLSTEQ 1023 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGq 1023 (1436)
-.+||++|+. .+.+.+||.|++.+..... ... .....+.++++.+++. +..+..+ +.|||||
T Consensus 382 ------~~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 382 ------LEVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred ------cEEEEEeCcccccCCCCCHHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 1489999975 5788899999998753211 011 1123567888889885 3456553 5799999
Q ss_pred HHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1024 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1024 rkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||+||++|+.+|++|+|||||+|||..+...+.+.|+++ +.|||+++|++. .+-...|+
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~ 506 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTE 506 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCE
Confidence 99999999999999999999999999999999999999876 569999999964 34455565
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.8e-49 Score=464.82 Aligned_cols=440 Identities=23% Similarity=0.342 Sum_probs=338.0
Q ss_pred ccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCcc----ceEEE
Q 038815 168 LQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQ----RVAAY 243 (1436)
Q Consensus 168 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~y 243 (1436)
++++.|+++..++|+|||+.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.++|++.....++ .-++.
T Consensus 11 ~~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~ 87 (500)
T COG1129 11 LRGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIAT 87 (500)
T ss_pred eecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEE
Confidence 556778889999999999999999999999999999999999999999998 99999999988765553 45889
Q ss_pred EcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc
Q 038815 244 ISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI 323 (1436)
Q Consensus 244 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 323 (1436)
|.|+..+.|+|||.|||.++........ . + +....+..+..+|+.+|++.
T Consensus 88 V~QEl~L~p~LsVaeNifLgre~~~~~g---~---i------------------------d~~~m~~~A~~~l~~lg~~~ 137 (500)
T COG1129 88 VHQELSLVPNLSVAENIFLGREPTRRFG---L---I------------------------DRKAMRRRARELLARLGLDI 137 (500)
T ss_pred EeechhccCCccHHHHhhcccccccCCC---c---c------------------------CHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999987654322100 0 0 01112334567899999975
Q ss_pred cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 038815 324 CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 398 (1436)
Q Consensus 324 ~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 398 (1436)
..++.|++ ||+||||-|.||+|+ +++|||||+.|+...+..+++.++++.. ++..+|.++|..+|+++
T Consensus 138 ~~~~~v~~-----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~Ei~~ 210 (500)
T COG1129 138 DPDTLVGD-----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDEVFE 210 (500)
T ss_pred Chhhhhhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHHHHH
Confidence 57777775 999999999999877 5999999999999999999999999864 56777789999999999
Q ss_pred hcCeEEEecCCeEEEecCh-HHHHHHHHhcCCCCCCCCCHHHHHHhhcChhhhhhHhhhccccccccCHHHHHHHHHhch
Q 038815 399 LFDDIILLSDGLIVYLGPR-ELVLDFFESMGFKCPERKGVADFLQEVTSRKDQQQYWAHKEMRYRFVTVQEFCEAFQSFH 477 (1436)
Q Consensus 399 lfD~vilL~~G~iv~~G~~-~~~~~~F~~lGf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~ef~~~f~~s~ 477 (1436)
+||+|.||.||+.+..++. .+. +.++..+
T Consensus 211 i~DritVlRDG~~v~~~~~~~~~--------------------------------------------~~~~lv~------ 240 (500)
T COG1129 211 IADRITVLRDGRVVGTRPTAAET--------------------------------------------SEDELVR------ 240 (500)
T ss_pred hcCEEEEEeCCEEeeecccccCC--------------------------------------------CHHHHHH------
Confidence 9999999999999876542 210 0000000
Q ss_pred hhHHHHHHhcCCCCCCCCCcccccCCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhheeeeccCCCC
Q 038815 478 VGQKLTAELRTPFDKSKSHPAALSMKEYGVGKKELLKANISREFLLMKRNSFVYIFKLTQLSTVAMVSMSLFFRTKMPKD 557 (1436)
Q Consensus 478 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~gslf~~~~~~~~ 557 (1436)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhcCCccchHhHHHHHHHHHhhHHHHHHHHHHhhhhhhccc
Q 038815 558 SVNDGGIYIGASFFAVMMTMFNGMSDISMTIAKLPVFYKQRDLRFYPAWSYALPAWIVKIPISFLEVAAWVFLTYYVIGF 637 (1436)
Q Consensus 558 ~~~~~~~~~g~lff~~l~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl 637 (1436)
.|+|
T Consensus 241 ---------------------------------------------------------------------------~MvG- 244 (500)
T COG1129 241 ---------------------------------------------------------------------------LMVG- 244 (500)
T ss_pred ---------------------------------------------------------------------------HhhC-
Confidence 0000
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccchhhhHHHhHhhChHHHHHH
Q 038815 638 DPNVGRFFKQYLLLLFVNQMATALFRFIGAAGRNMIVAMSFGSFALLMLFALGGFVLSRDDINKWWIWGYWCSPMMYAQN 717 (1436)
Q Consensus 638 ~~~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~i~~w~~W~~~isP~~ya~~ 717 (1436)
T Consensus 245 -------------------------------------------------------------------------------- 244 (500)
T COG1129 245 -------------------------------------------------------------------------------- 244 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcCCccccccCCCccchhHHhhcccCcccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceeeecCcc
Q 038815 718 AIVANEFLGHSWRKFTTNSNESLGVQALKSRGFFPHAYWYWLGLGAVIGFLLVFNVGFTLSLTFLNKFEKPRAVIFDESE 797 (1436)
Q Consensus 718 al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~lig~~v~f~i~~~~~L~~~~~~~~~~~~~~~~~~ 797 (1436)
+.... . | + . .
T Consensus 245 ---------r~~~~------------------~------------------------------~--~----------~-~ 254 (500)
T COG1129 245 ---------RELED------------------L------------------------------F--P----------E-P 254 (500)
T ss_pred ---------cchhh------------------h------------------------------c--c----------c-c
Confidence 00000 0 0 0 0 0
Q ss_pred cccccccCCCcccCCCCCCCCccccCCCCCCCccccccccCCCccchhhHHHhhhhhccCccccCCCceeEEeceeeeee
Q 038815 798 SNEKDNRTGGTLQSSTSGSSSSLRTRSGESGDYIWERSSSMSSSVTETAVEIRNLIRKKGMVLPFEPHSLTFDEVVYSVD 877 (1436)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 877 (1436)
. . . ...+..++.++++.
T Consensus 255 -~-------~-----~-----------------------------------------------~~~~~~l~v~~l~~--- 271 (500)
T COG1129 255 -P-------E-----E-----------------------------------------------GIGEPVLEVRNLSG--- 271 (500)
T ss_pred -c-------c-----c-----------------------------------------------CCCCcEEEEecCCC---
Confidence 0 0 0 00011233333321
Q ss_pred cccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc----cccce
Q 038815 878 MPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE----TFTRI 953 (1436)
Q Consensus 878 ~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~----~~~~~ 953 (1436)
...++||||++++||+++|-|-=|||+|-|+++|.|... ..+|+|.+||.+.... ..+.-
T Consensus 272 --------------~~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~G 335 (500)
T COG1129 272 --------------GGKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAG 335 (500)
T ss_pred --------------CCceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcC
Confidence 114789999999999999999999999999999999544 3479999999876432 34557
Q ss_pred EEEeccC---CCCCCCCCHHHHHHHhhhhcCC-C-CCCHHHHHHHHHHHHHHcCCCccc-ccccCCCCCCCCCHHHHHHH
Q 038815 954 SGYCEQN---DIHSPLVTVYESLLYSAWLRLP-P-EVDSETRKMFIEEIMELVELNPLR-QSLVGLPGVSGLSTEQRKRL 1027 (1436)
Q Consensus 954 ~gyv~Q~---d~~~~~lTv~E~l~f~a~lr~~-~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~lSgGqrkRl 1027 (1436)
++||+.| +-++..++|+||+.++...+.. . -.+.....+.+++..+.|++.... +.. +..||||.+|||
T Consensus 336 i~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKV 410 (500)
T COG1129 336 IAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKV 410 (500)
T ss_pred CEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhH
Confidence 9999987 4577889999999887332321 1 245555566789999999986432 233 467999999999
Q ss_pred HHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1028 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1028 ~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||+.|..+|+||+|||||.|+|.-+...|.++|++++++|.+||+++-+. .|+..+.|+
T Consensus 411 vlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSEl-pEll~~~DR 470 (500)
T COG1129 411 VLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSEL-PELLGLSDR 470 (500)
T ss_pred HHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCCh-HHHHhhCCE
Confidence 999999999999999999999999999999999999999999999999875 588899999
No 42
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=4.8e-48 Score=471.81 Aligned_cols=215 Identities=27% Similarity=0.307 Sum_probs=163.8
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCC
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDN 249 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~ 249 (1436)
.+....+.+++|+|+|+.+.+|+.++|+|+||||||||||+|+|...|+ +|+|...+. ..++|++|++.
T Consensus 8 ~ls~~~g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~~--------~~v~~l~Q~~~ 76 (530)
T COG0488 8 NLSLAYGDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPKG--------LRVGYLSQEPP 76 (530)
T ss_pred eeEEeeCCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecCC--------ceEEEeCCCCC
Confidence 3455567788999999999999999999999999999999999999998 999987642 35899999999
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChH---HH-HHHhhhhhhHHHHHHHHHHHHcCCcccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDID---VF-MKAAATEGQEANVLTDYYLKVLGLDICA 325 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 325 (1436)
..+..||.+.+.-+.... +++..+..... ...++++.. .+ ......++.+.+..+..++..||++..
T Consensus 77 ~~~~~tv~~~v~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~- 147 (530)
T COG0488 77 LDPEKTVLDYVIEGFGEL-----RELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE- 147 (530)
T ss_pred cCCCccHHHHHHhhhHHH-----HHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-
Confidence 999999999998654321 11111111111 111111111 11 112223445666778889999999876
Q ss_pred cccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 038815 326 DTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLF 400 (1436)
Q Consensus 326 ~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lf 400 (1436)
++.++ .||||||.||++|+++ +|+||||||+||..+..++.+.|++ ..+ ++|.++|+....-+.|
T Consensus 148 ~~~~~-----~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~----~~g-tviiVSHDR~FLd~V~ 217 (530)
T COG0488 148 DRPVS-----SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKR----YPG-TVIVVSHDRYFLDNVA 217 (530)
T ss_pred cCchh-----hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh----CCC-cEEEEeCCHHHHHHHh
Confidence 55554 6999999999998766 5999999999999999999999986 245 5566899999999999
Q ss_pred CeEEEecCCeEEEe
Q 038815 401 DDIILLSDGLIVYL 414 (1436)
Q Consensus 401 D~vilL~~G~iv~~ 414 (1436)
++|+-|+.|++..+
T Consensus 218 t~I~~ld~g~l~~y 231 (530)
T COG0488 218 THILELDRGKLTPY 231 (530)
T ss_pred hheEEecCCceeEe
Confidence 99999999977544
No 43
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1e-47 Score=489.77 Aligned_cols=185 Identities=19% Similarity=0.249 Sum_probs=143.0
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.++ +++.+|+|+|+.|++|++++|+|||||||||||++|+|... +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 477888887652 12469999999999999999999999999999999999765 35799988752
Q ss_pred ccccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHH
Q 038815 946 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGVSGLSTEQR 1024 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGqr 1024 (1436)
..+||++|+.. ..+++.++..+......+. .. .+.++++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~~-~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFPG-VP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcCC-CC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 35899999752 4456666643221111111 11 235678999999974 44544 467999999
Q ss_pred HHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1025 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1025 kRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+||++|+.+|++|+|||||+|||..+...+++.|++. +.|||+++|++. .+-+..|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~dr 693 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDE 693 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999888765 349999999975 34455666
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=3.1e-45 Score=424.20 Aligned_cols=445 Identities=21% Similarity=0.304 Sum_probs=338.3
Q ss_pred ccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCcc----ceEEE
Q 038815 168 LQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQ----RVAAY 243 (1436)
Q Consensus 168 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~y 243 (1436)
++...++++...+++|||++|++||+.+|+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..|+ .-+|+
T Consensus 7 ~~~itK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGM 83 (501)
T COG3845 7 MRGITKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGM 83 (501)
T ss_pred EeccEEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcE
Confidence 345667778899999999999999999999999999999999999999998 99999999998665554 35899
Q ss_pred EcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc
Q 038815 244 ISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI 323 (1436)
Q Consensus 244 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 323 (1436)
|.||..+++++||.||+..+......+ + + ........++++.+.+||+-
T Consensus 84 VhQHF~Lv~~lTV~ENiiLg~e~~~~~-~------~------------------------~~~~~~~~i~~l~~~yGl~v 132 (501)
T COG3845 84 VHQHFMLVPTLTVAENIILGLEPSKGG-L------I------------------------DRRQARARIKELSERYGLPV 132 (501)
T ss_pred EeeccccccccchhhhhhhcCcccccc-c------c------------------------CHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999875321000 0 0 01123345678899999998
Q ss_pred cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 038815 324 CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 398 (1436)
Q Consensus 324 ~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 398 (1436)
..|.+|++ ||=||||||.|-+++ +|+|||||+-|-|..+.++++.|++++. .+.+||.++|-..|+.+
T Consensus 133 dp~~~V~d-----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~--~G~tIi~ITHKL~Ev~~ 205 (501)
T COG3845 133 DPDAKVAD-----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA--EGKTIIFITHKLKEVMA 205 (501)
T ss_pred Cccceeec-----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHH
Confidence 88877775 999999999995544 6999999999999999999999999876 34555668999999999
Q ss_pred hcCeEEEecCCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHHhhcChhhhhhHhhhccccccccCHHHHHHHHHhchh
Q 038815 399 LFDDIILLSDGLIVYLGPRELVLDFFESMGFKCPERKGVADFLQEVTSRKDQQQYWAHKEMRYRFVTVQEFCEAFQSFHV 478 (1436)
Q Consensus 399 lfD~vilL~~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~ef~~~f~~s~~ 478 (1436)
.+|++.||..|+++-.-++ . ++ .+.+++++.
T Consensus 206 iaDrvTVLR~Gkvvgt~~~----------------~-------------~~--------------~t~~ela~l------ 236 (501)
T COG3845 206 IADRVTVLRRGKVVGTVDP----------------V-------------AE--------------TTEEELAEL------ 236 (501)
T ss_pred hhCeeEEEeCCeEEeeecC----------------C-------------CC--------------CCHHHHHHH------
Confidence 9999999999998643210 0 00 011111000
Q ss_pred hHHHHHHhcCCCCCCCCCcccccCCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhheeeeccCCCCc
Q 038815 479 GQKLTAELRTPFDKSKSHPAALSMKEYGVGKKELLKANISREFLLMKRNSFVYIFKLTQLSTVAMVSMSLFFRTKMPKDS 558 (1436)
Q Consensus 479 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~gslf~~~~~~~~~ 558 (1436)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhcCCccchHhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccc
Q 038815 559 VNDGGIYIGASFFAVMMTMFNGMSDISMTIAKLPVFYKQRDLRFYPAWSYALPAWIVKIPISFLEVAAWVFLTYYVIGFD 638 (1436)
Q Consensus 559 ~~~~~~~~g~lff~~l~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~ 638 (1436)
|+|
T Consensus 237 ---------------------------------------------------------------------------MvG-- 239 (501)
T COG3845 237 ---------------------------------------------------------------------------MVG-- 239 (501)
T ss_pred ---------------------------------------------------------------------------hcC--
Confidence 000
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccchhhhHHHhHhhChHHHHHHH
Q 038815 639 PNVGRFFKQYLLLLFVNQMATALFRFIGAAGRNMIVAMSFGSFALLMLFALGGFVLSRDDINKWWIWGYWCSPMMYAQNA 718 (1436)
Q Consensus 639 ~~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~i~~w~~W~~~isP~~ya~~a 718 (1436)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcCCccccccCCCccchhHHhhcccCcccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceeeecCccc
Q 038815 719 IVANEFLGHSWRKFTTNSNESLGVQALKSRGFFPHAYWYWLGLGAVIGFLLVFNVGFTLSLTFLNKFEKPRAVIFDESES 798 (1436)
Q Consensus 719 l~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~lig~~v~f~i~~~~~L~~~~~~~~~~~~~~~~~~~ 798 (1436)
+ ++. .
T Consensus 240 --------~---------------~v~-----------------------------------------------~----- 244 (501)
T COG3845 240 --------R---------------EVV-----------------------------------------------L----- 244 (501)
T ss_pred --------C---------------ccc-----------------------------------------------c-----
Confidence 0 000 0
Q ss_pred ccccccCCCcccCCCCCCCCccccCCCCCCCccccccccCCCccchhhHHHhhhhhccCccccCCCceeEEeceeeeeec
Q 038815 799 NEKDNRTGGTLQSSTSGSSSSLRTRSGESGDYIWERSSSMSSSVTETAVEIRNLIRKKGMVLPFEPHSLTFDEVVYSVDM 878 (1436)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 878 (1436)
. . . .. . . .| .+.-++.+|++..-+
T Consensus 245 --------~-----~----~---~~--------------~---------------~-----~p-g~~vL~V~~L~v~~~- 268 (501)
T COG3845 245 --------R-----V----V---KP--------------P---------------S-----TP-GEVVLEVEDLSVKDR- 268 (501)
T ss_pred --------c-----c----c---cC--------------C---------------C-----CC-CCeEEEEeeeEeecC-
Confidence 0 0 0 00 0 0 00 012455566654322
Q ss_pred ccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec-c---cc-cccce
Q 038815 879 PQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK-K---QE-TFTRI 953 (1436)
Q Consensus 879 ~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~-~---~~-~~~~~ 953 (1436)
.....+++|||.+++||++||.|..|-|.+.|+.+|+|..+. .+|+|.++|.+. . .. ..+.-
T Consensus 269 -----------~~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G 335 (501)
T COG3845 269 -----------RGVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLG 335 (501)
T ss_pred -----------CCCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcC
Confidence 123578999999999999999999999999999999997642 359999999885 2 22 23456
Q ss_pred EEEeccCC---CCCCCCCHHHHHHHhhhhcCC----CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 038815 954 SGYCEQND---IHSPLVTVYESLLYSAWLRLP----PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKR 1026 (1436)
Q Consensus 954 ~gyv~Q~d---~~~~~lTv~E~l~f~a~lr~~----~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkR 1026 (1436)
+||||.|. -+-+.+|+.||+.+...-+.| .-.+..+.+++.+++++.++.....-. ...+.||||++||
T Consensus 336 ~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK 411 (501)
T COG3845 336 LAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQK 411 (501)
T ss_pred CccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceeh
Confidence 89999986 345788999999876432211 134566777889999999998733211 1246899999999
Q ss_pred HHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1027 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1027 l~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+-+||||..+|++|+..+||.|||..+++.|.+.|.++++.|++|++++-+. .+|+++-|+
T Consensus 412 ~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dL-DEil~lsDr 472 (501)
T COG3845 412 LILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDL-DEILELSDR 472 (501)
T ss_pred hhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhH-HHHHHhhhe
Confidence 9999999999999999999999999999999999999999999999999886 589999999
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-41 Score=356.99 Aligned_cols=225 Identities=26% Similarity=0.398 Sum_probs=189.5
Q ss_pred ccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCC----CCccceEEE
Q 038815 168 LQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDE----FEPQRVAAY 243 (1436)
Q Consensus 168 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~----~~~~~~~~y 243 (1436)
++++.+.+++.++|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|.++.. ...|+.+|+
T Consensus 5 i~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGm 81 (240)
T COG1126 5 IKNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGM 81 (240)
T ss_pred EEeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCe
Confidence 445677788899999999999999999999999999999999999999998 9999999976532 123678999
Q ss_pred EcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc
Q 038815 244 ISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI 323 (1436)
Q Consensus 244 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 323 (1436)
|+|+.++||.+||.||+..+...- ... ..++++.....+|+.+||.+
T Consensus 82 VFQ~fnLFPHlTvleNv~lap~~v---------~~~------------------------~k~eA~~~A~~lL~~VGL~~ 128 (240)
T COG1126 82 VFQQFNLFPHLTVLENVTLAPVKV---------KKL------------------------SKAEAREKALELLEKVGLAD 128 (240)
T ss_pred ecccccccccchHHHHHHhhhHHH---------cCC------------------------CHHHHHHHHHHHHHHcCchh
Confidence 999999999999999999864321 011 12234455678899999998
Q ss_pred cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 038815 324 CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 398 (1436)
Q Consensus 324 ~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 398 (1436)
.+| .++.+|||||||||+||||+ ++++|||||+|||....++.+.++++++. +.|.+.++|....+.+
T Consensus 129 ka~-----~yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e--GmTMivVTHEM~FAr~ 201 (240)
T COG1126 129 KAD-----AYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMIIVTHEMGFARE 201 (240)
T ss_pred hhh-----hCccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc--CCeEEEEechhHHHHH
Confidence 887 56778999999999999987 49999999999999999999999999873 4555568899999999
Q ss_pred hcCeEEEecCCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHHh
Q 038815 399 LFDDIILLSDGLIVYLGPRELVLDFFESMGFKCPERKGVADFLQE 443 (1436)
Q Consensus 399 lfD~vilL~~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~~ 443 (1436)
.+|||++|++|+++..|+++++ |..|.+....+||..
T Consensus 202 VadrviFmd~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 202 VADRVIFMDQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred hhheEEEeeCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 9999999999999999999876 456766667777754
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-39 Score=339.26 Aligned_cols=181 Identities=28% Similarity=0.364 Sum_probs=162.1
Q ss_pred CceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc----cccccceEEEeccCCCCCC
Q 038815 890 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK----QETFTRISGYCEQNDIHSP 965 (1436)
Q Consensus 890 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~----~~~~~~~~gyv~Q~d~~~~ 965 (1436)
+...+|+|||+.|++||+++|+|||||||||||++|.+... +.+|+|.++|.... ....|+.+|+|+|+..+||
T Consensus 13 g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 13 GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 46789999999999999999999999999999999999876 45899999996442 2357789999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCC
Q 038815 966 LVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1045 (1436)
Q Consensus 966 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEP 1045 (1436)
++||.||+..+-..- ...++++-++...++|+.+||.+.+|.. +..|||||||||+|||||+.+|+++++|||
T Consensus 91 HlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGGQqQRVAIARALaM~P~vmLFDEP 163 (240)
T COG1126 91 HLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGGQQQRVAIARALAMDPKVMLFDEP 163 (240)
T ss_pred cchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcHHHHHHHHHHHHcCCCCEEeecCC
Confidence 999999999875432 2345667777889999999999999887 568999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCC
Q 038815 1046 TSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPS 1079 (1436)
Q Consensus 1046 TsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps 1079 (1436)
||.||+.....+.+.++++|+.|.|.||+||...
T Consensus 164 TSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~ 197 (240)
T COG1126 164 TSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMG 197 (240)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCeEEEEechhH
Confidence 9999999999999999999999999999999864
No 47
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.8e-39 Score=366.04 Aligned_cols=223 Identities=30% Similarity=0.430 Sum_probs=194.6
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCcc-ceEEEEcCC
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQ-RVAAYISQH 247 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~-~~~~yv~Q~ 247 (1436)
+++.+.+++..+|+|+|+.|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.+++...|+ |.+|+|+|+
T Consensus 7 ~~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~ 83 (338)
T COG3839 7 KNVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQN 83 (338)
T ss_pred eeeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCC
Confidence 44556666555999999999999999999999999999999999999998 99999999999998775 889999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
..++|+|||+||+.|+++.++... ++++.+++++.+.|+|++..|
T Consensus 84 yALyPhmtV~~Niaf~Lk~~~~~k----------------------------------~ei~~rV~eva~~L~l~~lL~- 128 (338)
T COG3839 84 YALYPHMTVYENIAFGLKLRGVPK----------------------------------AEIDKRVKEVAKLLGLEHLLN- 128 (338)
T ss_pred ccccCCCcHHHHhhhhhhhCCCch----------------------------------HHHHHHHHHHHHHcCChhHHh-
Confidence 999999999999999998875421 224456788999999998776
Q ss_pred cccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
+.+++|||||||||++|||++ ++||||+|.||...+.++...++++.+.. ++++|.++|+..|+..++|+
T Consensus 129 ----r~P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l-~~T~IYVTHDq~EAmtladr 203 (338)
T COG3839 129 ----RKPLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERL-GTTTIYVTHDQVEAMTLADR 203 (338)
T ss_pred ----cCcccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhc-CCcEEEEcCCHHHHHhhCCE
Confidence 456789999999999999885 99999999999999999999999976654 45666689999999999999
Q ss_pred EEEecCCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHH
Q 038815 403 IILLSDGLIVYLGPRELVLDFFESMGFKCPERKGVADFLQ 442 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~ 442 (1436)
|++|++|++...|++.++ |..|...-+|+|+-
T Consensus 204 i~Vm~~G~i~Q~g~p~el--------y~~P~n~fVA~FiG 235 (338)
T COG3839 204 IVVMNDGRIQQVGTPLEL--------YERPANLFVAGFIG 235 (338)
T ss_pred EEEEeCCeeeecCChHHH--------hhCccchhhhhhcC
Confidence 999999999999999998 45677777788764
No 48
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-38 Score=348.68 Aligned_cols=224 Identities=30% Similarity=0.458 Sum_probs=187.8
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCc---cCCCCCc-cceEEEEcC
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGH---NMDEFEP-QRVAAYISQ 246 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~---~~~~~~~-~~~~~yv~Q 246 (1436)
..+......+++|||+.|+.||+++++|||||||||||++|||+..|+ +|+|.+||. |.+.... .|.+|||+|
T Consensus 8 ~~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ 84 (345)
T COG1118 8 VKKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQ 84 (345)
T ss_pred hhhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEe
Confidence 345556677999999999999999999999999999999999999998 999999999 6665444 378999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccc
Q 038815 247 HDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICAD 326 (1436)
Q Consensus 247 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 326 (1436)
+..+|+.|||.|||.|+++++.. + |+ ..+++..++++|+.+.|++.+
T Consensus 85 ~YALF~HmtVa~NIAFGl~~~~~--~-----------------p~-------------~~~~r~rv~elL~lvqL~~la- 131 (345)
T COG1118 85 HYALFPHMTVADNIAFGLKVRKE--R-----------------PS-------------EAEIRARVEELLRLVQLEGLA- 131 (345)
T ss_pred chhhcccchHHhhhhhccccccc--C-----------------CC-------------hhhHHHHHHHHHHHhcccchh-
Confidence 99999999999999999987621 0 10 112344577889999998755
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
++++.+|||||||||++|||+ +|+||||+++||...+.++-+.|+++.+..+.|++ .++|+.+|+++++|
T Consensus 132 ----~ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttv-fVTHD~eea~~lad 206 (345)
T COG1118 132 ----DRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTV-FVTHDQEEALELAD 206 (345)
T ss_pred ----hcCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEE-EEeCCHHHHHhhcc
Confidence 577889999999999999887 49999999999999999999999998776555555 48999999999999
Q ss_pred eEEEecCCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHHh
Q 038815 402 DIILLSDGLIVYLGPRELVLDFFESMGFKCPERKGVADFLQE 443 (1436)
Q Consensus 402 ~vilL~~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~~ 443 (1436)
+|++|++|+|...||++++. .-|...-+..|+-+
T Consensus 207 rvvvl~~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 207 RVVVLNQGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred eEEEecCCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 99999999999999999983 44555555555543
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-38 Score=349.08 Aligned_cols=219 Identities=28% Similarity=0.358 Sum_probs=189.0
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc------cceEEEEcCCCC
Q 038815 176 KHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP------QRVAAYISQHDN 249 (1436)
Q Consensus 176 ~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~ 249 (1436)
+..++|+|||++|++||+.+|+|+||||||||++++.++..|+ +|+|.++|.++..... |+.+|+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999999998 9999999988766543 478999999999
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLV 329 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 329 (1436)
++...||.||+.|.++..+.+ ..+++.++.++|+.+||++.+|
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~--- 136 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKAD--- 136 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhc---
Confidence 999999999999998876532 1224456788999999998776
Q ss_pred cCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 038815 330 GDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDII 404 (1436)
Q Consensus 330 g~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vi 404 (1436)
.++.+|||||||||+||||+ +|++|||||+|||.|+..|++.|+++.+..+ .+|+.++|-++-+-+.||+|.
T Consensus 137 --~yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lg-lTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 137 --RYPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELG-LTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred --cCchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcC-CEEEEEechHHHHHHHhhhhe
Confidence 56778999999999999887 4999999999999999999999999987665 555568899999999999999
Q ss_pred EecCCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHHhhc
Q 038815 405 LLSDGLIVYLGPRELVLDFFESMGFKCPERKGVADFLQEVT 445 (1436)
Q Consensus 405 lL~~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~~v~ 445 (1436)
+|++|++++.|+..++ |..|.+.-..+|+.+..
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 9999999999999887 34566666667766554
No 50
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-38 Score=366.40 Aligned_cols=227 Identities=29% Similarity=0.428 Sum_probs=199.0
Q ss_pred ccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcC
Q 038815 168 LQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQ 246 (1436)
Q Consensus 168 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q 246 (1436)
++++.+.++...+|+|+|+.|++||++.|||||||||||||++|||...|+ +|+|.++|+++....+ +|.+++|+|
T Consensus 8 i~~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ 84 (352)
T COG3842 8 IRNVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQ 84 (352)
T ss_pred EEeeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeec
Confidence 455677788889999999999999999999999999999999999999998 9999999999998877 478999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccc
Q 038815 247 HDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICAD 326 (1436)
Q Consensus 247 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 326 (1436)
+-.+||+|||+||+.|+++.++... ..+++.+++++|+.++|++.++
T Consensus 85 ~YALFPHltV~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~ 131 (352)
T COG3842 85 SYALFPHMTVEENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFAD 131 (352)
T ss_pred CcccCCCCcHHHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhh
Confidence 9999999999999999987442110 1123456788999999998655
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
+++.+|||||||||++|||++ ||||||.|+||..-+.++...++++.+.. +.+.|.++|+..|+..++|
T Consensus 132 -----R~p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msD 205 (352)
T COG3842 132 -----RKPHQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSD 205 (352)
T ss_pred -----hChhhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhcc
Confidence 567789999999999999884 99999999999999999999999998776 5555668999999999999
Q ss_pred eEEEecCCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHHhh
Q 038815 402 DIILLSDGLIVYLGPRELVLDFFESMGFKCPERKGVADFLQEV 444 (1436)
Q Consensus 402 ~vilL~~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~~v 444 (1436)
+|++|++|+|...|+++++ |..|...-+|+|+-+.
T Consensus 206 rI~Vm~~G~I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 206 RIAVMNDGRIEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred ceEEccCCceeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999999999999998 5678888889998654
No 51
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-38 Score=338.06 Aligned_cols=214 Identities=28% Similarity=0.404 Sum_probs=186.8
Q ss_pred ccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEE
Q 038815 168 LQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYI 244 (1436)
Q Consensus 168 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv 244 (1436)
++++.+++.++.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||+++.+.+. |+.+|||
T Consensus 4 ~~nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYv 80 (309)
T COG1125 4 FENVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYV 80 (309)
T ss_pred eeeeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhh
Confidence 345667778889999999999999999999999999999999999999998 9999999999877654 6899999
Q ss_pred cCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccc
Q 038815 245 SQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDIC 324 (1436)
Q Consensus 245 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 324 (1436)
-|+-.+||++||.||+.+-..+.+.. .++++.+++++|+.+||+..
T Consensus 81 iQqigLFPh~Tv~eNIa~VP~L~~w~----------------------------------k~~i~~r~~ELl~lvgL~p~ 126 (309)
T COG1125 81 IQQIGLFPHLTVAENIATVPKLLGWD----------------------------------KERIKKRADELLDLVGLDPS 126 (309)
T ss_pred hhhcccCCCccHHHHHHhhhhhcCCC----------------------------------HHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999876655421 12345568899999999752
Q ss_pred ccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 038815 325 ADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDL 399 (1436)
Q Consensus 325 ~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~l 399 (1436)
...+++++.|||||+|||.++||+ +++||||+++|||-++.++-+.++++.+..++|+ |.++|+.+|++.+
T Consensus 127 ---~~~~RyP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTi-vfVTHDidEA~kL 202 (309)
T COG1125 127 ---EYADRYPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTI-VFVTHDIDEALKL 202 (309)
T ss_pred ---HHhhcCchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEE-EEEecCHHHHHhh
Confidence 234678999999999999998877 5999999999999999999999999877766555 4589999999999
Q ss_pred cCeEEEecCCeEEEecChHHHHH
Q 038815 400 FDDIILLSDGLIVYLGPRELVLD 422 (1436)
Q Consensus 400 fD~vilL~~G~iv~~G~~~~~~~ 422 (1436)
+|+|++|++|+++.++++++++.
T Consensus 203 adri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 203 ADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred hceEEEecCCeEEEeCCHHHHHh
Confidence 99999999999999999999863
No 52
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.9e-38 Score=362.53 Aligned_cols=215 Identities=33% Similarity=0.460 Sum_probs=183.8
Q ss_pred cccccccc-cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC--CccceEEEEc
Q 038815 169 QILPTRKK-HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF--EPQRVAAYIS 245 (1436)
Q Consensus 169 ~~~~~~~~-~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~ 245 (1436)
+++.++++ .+.+|+|||+.|++|++++|+||||||||||||+|+|++.|+ +|+|.++|.+.... ..++.+||++
T Consensus 8 ~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~ 84 (293)
T COG1131 8 RNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVP 84 (293)
T ss_pred cceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEc
Confidence 45667777 689999999999999999999999999999999999999997 99999999887652 3457899999
Q ss_pred CCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccc
Q 038815 246 QHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICA 325 (1436)
Q Consensus 246 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 325 (1436)
|++.+++.+||+|||.|.+++++.... .....++++++.+||++..
T Consensus 85 ~~~~~~~~lT~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~ 130 (293)
T COG1131 85 QEPSLYPELTVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKA 130 (293)
T ss_pred cCCCCCccccHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhh
Confidence 999999999999999999988864310 1123467899999999844
Q ss_pred cccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 038815 326 DTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLF 400 (1436)
Q Consensus 326 ~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lf 400 (1436)
+ ..+++||+||||||+||.|+ ++||||||+|||+.++.++.+.|+++++. ++++|+..+|...++..+|
T Consensus 131 ~-----~~~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~ 204 (293)
T COG1131 131 N-----KKVRTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELC 204 (293)
T ss_pred C-----cchhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhC
Confidence 3 44668999999999997655 59999999999999999999999999874 4355666788899999999
Q ss_pred CeEEEecCCeEEEecChHHHHHHHHh
Q 038815 401 DDIILLSDGLIVYLGPRELVLDFFES 426 (1436)
Q Consensus 401 D~vilL~~G~iv~~G~~~~~~~~F~~ 426 (1436)
|+|++|++|++++.|+.+++...+..
T Consensus 205 d~v~il~~G~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 205 DRVIILNDGKIIAEGTPEELKEKFGG 230 (293)
T ss_pred CEEEEEeCCEEEEeCCHHHHHHhhcc
Confidence 99999999999999999988766543
No 53
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.4e-37 Score=337.59 Aligned_cols=186 Identities=29% Similarity=0.429 Sum_probs=160.0
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc------ccc-cceEEEeccCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ------ETF-TRISGYCEQNDIHS 964 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~------~~~-~~~~gyv~Q~d~~~ 964 (1436)
..+|++||+.|++||++||||||||||||||++|+|...+ .+|.|.++|.+... ..+ ++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999997764 57999999975432 123 45799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccc-cccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceec
Q 038815 965 PLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQ-SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1043 (1436)
Q Consensus 965 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lD 1043 (1436)
|.+||+||+.....+... +..++++.++++++.+||.+..+ .. +..|||||||||+|||||+.+|+||+.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 999999999987655432 22256677899999999997665 44 4689999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhhh
Q 038815 1044 EPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1044 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
|||.+||+.++..|++.+++++++ |+|||++||+| ++-+..|+.
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~ 212 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRV 212 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEE
Confidence 999999999999999999999865 99999999997 466678874
No 54
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=4.2e-37 Score=356.72 Aligned_cols=178 Identities=21% Similarity=0.264 Sum_probs=133.3
Q ss_pred CceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCe
Q 038815 864 PHSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGY 943 (1436)
Q Consensus 864 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~ 943 (1436)
+..+.++|+++.++ ++..++++++|-+.+++.+|++||||||||||||++.|... +..|.+.-.-+
T Consensus 387 ~pvi~~~nv~F~y~------------~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H 452 (614)
T KOG0927|consen 387 PPVIMVQNVSFGYS------------DNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSH 452 (614)
T ss_pred CCeEEEeccccCCC------------CcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--ccccccccccc
Confidence 34677888887654 22368999999999999999999999999999999999765 34566654322
Q ss_pred ecccccccceEEEeccC--CCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 944 LKKQETFTRISGYCEQN--DIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 944 ~~~~~~~~~~~gyv~Q~--d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
. .+++-.|+ +.+.-..++-|+++=. . ..+.+.+.+..++..+||..-.+.. .++.||+
T Consensus 453 ~--------~~~~y~Qh~~e~ldl~~s~le~~~~~----~----~~~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~ 512 (614)
T KOG0927|consen 453 N--------KLPRYNQHLAEQLDLDKSSLEFMMPK----F----PDEKELEEMRSILGRFGLTGDAQVV----PMSQLSD 512 (614)
T ss_pred c--------cchhhhhhhHhhcCcchhHHHHHHHh----c----cccchHHHHHHHHHHhCCCcccccc----chhhccc
Confidence 1 12232332 2222234566665311 1 1134456678899999998655443 2578999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCC
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQP 1078 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp 1078 (1436)
|||+||..|+.++..|.||+|||||+|||..+...+.++|.+. ..+||.++|+-
T Consensus 513 Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDf 566 (614)
T KOG0927|consen 513 GQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDF 566 (614)
T ss_pred ccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechh
Confidence 9999999999999999999999999999999999999998776 56899999983
No 55
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.7e-38 Score=360.71 Aligned_cols=187 Identities=33% Similarity=0.463 Sum_probs=168.5
Q ss_pred ceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc--ccccceEEEeccCCCCCCCCC
Q 038815 891 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ--ETFTRISGYCEQNDIHSPLVT 968 (1436)
Q Consensus 891 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lT 968 (1436)
++.+|+|||++|++||++||+|||||||||||++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT 94 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELT 94 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeCccCHHHHHhheEEEccCCCCCcccc
Confidence 46899999999999999999999999999999999998763 68999999987653 456788999999999999999
Q ss_pred HHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCC
Q 038815 969 VYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1048 (1436)
Q Consensus 969 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsg 1048 (1436)
|+|+|.|.+.++.+.. +...++++++++.++|.+.++.. +++||+||||||+||+||+++|++|||||||+|
T Consensus 95 ~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~G 166 (293)
T COG1131 95 VRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMKQRLSIALALLHDPELLILDEPTSG 166 (293)
T ss_pred HHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcC
Confidence 9999999999987543 44566899999999999855554 468999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcC-CEEEEEecCCCHHHHHHhhh
Q 038815 1049 LDARAAAIVMRTVKNTVETG-RTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1049 LD~~~~~~i~~~l~~~~~~g-~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||+.++..+++.|++++++| +||++++|+++ ++-+.+|+
T Consensus 167 LDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~ 206 (293)
T COG1131 167 LDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDR 206 (293)
T ss_pred CCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCE
Confidence 99999999999999999987 79999999985 67777998
No 56
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.8e-38 Score=337.99 Aligned_cols=197 Identities=26% Similarity=0.356 Sum_probs=170.9
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++++++.+. ...+|+|||++|.+||+++|+||||||||||||+|||..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccc
Confidence 356667766543 3679999999999999999999999999999999999876 4579999999876
Q ss_pred ccccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 038815 946 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 1025 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1025 (1436)
. .-.+.+|||+|++.++|-+||+||+.|+...+. .+.+++.++++++|+.+||.+..|.. +..|||||||
T Consensus 68 ~--~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 T--GPGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred C--CCCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 2 234678999999999999999999999876653 45566777999999999999999987 5789999999
Q ss_pred HHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1026 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1026 Rl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||+|||||+.+|+||+||||++.||+.|+..+++.|.++.+ .+.|||++||+....++ +=|+
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~-LsdR 200 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVY-LADR 200 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHh-hhCE
Confidence 99999999999999999999999999999999999999865 58999999999765443 5566
No 57
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-37 Score=330.83 Aligned_cols=215 Identities=26% Similarity=0.351 Sum_probs=183.8
Q ss_pred cccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc------cce
Q 038815 167 SLQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP------QRV 240 (1436)
Q Consensus 167 ~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~ 240 (1436)
.++.+.++.+++.||+|||+.|++||+++|+||||||||||||+|.|+++|+ +|+|.++|.++..... ++.
T Consensus 10 ~vr~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r 86 (263)
T COG1127 10 EVRGVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKR 86 (263)
T ss_pred EEeeeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhh
Confidence 4556677788899999999999999999999999999999999999999998 9999999999866543 467
Q ss_pred EEEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcC
Q 038815 241 AAYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLG 320 (1436)
Q Consensus 241 ~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg 320 (1436)
+|+++|+-.+|..|||+||+.|..+-+. .+.+ ...+..+..-|+..|
T Consensus 87 ~GvlFQ~gALFssltV~eNVafplre~~---------~lp~------------------------~~i~~lv~~KL~~VG 133 (263)
T COG1127 87 MGVLFQQGALFSSLTVFENVAFPLREHT---------KLPE------------------------SLIRELVLMKLELVG 133 (263)
T ss_pred eeEEeeccccccccchhHhhheehHhhc---------cCCH------------------------HHHHHHHHHHHHhcC
Confidence 9999999999999999999999765331 1111 123344566688999
Q ss_pred CcccccccccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhh
Q 038815 321 LDICADTLVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPE 395 (1436)
Q Consensus 321 L~~~~~t~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~ 395 (1436)
|... +++.++..||||+|||+++|||.+ +|+||||+||||.++..+.+.++++.+..+.|++ +++|+.++
T Consensus 134 L~~~----~~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i-~VTHDl~s 208 (263)
T COG1127 134 LRGA----AADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVI-MVTHDLDS 208 (263)
T ss_pred CChh----hhhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEE-EEECChHH
Confidence 9754 345788999999999999999884 9999999999999999999999999887665555 48899999
Q ss_pred HHhhcCeEEEecCCeEEEecChHHHHH
Q 038815 396 TYDLFDDIILLSDGLIVYLGPRELVLD 422 (1436)
Q Consensus 396 ~~~lfD~vilL~~G~iv~~G~~~~~~~ 422 (1436)
++..+|+|++|.+|+|+..|+++++.+
T Consensus 209 ~~~i~Drv~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 209 LLTIADRVAVLADGKVIAEGTPEELLA 235 (263)
T ss_pred HHhhhceEEEEeCCEEEEeCCHHHHHh
Confidence 999999999999999999999999863
No 58
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-37 Score=340.91 Aligned_cols=200 Identities=27% Similarity=0.433 Sum_probs=169.7
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.++ ++ .+|+|||+.+++|++++|+||||||||||+++|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~------------~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG------------NR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC------------CE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 578889988764 12 59999999999999999999999999999999999765 4589999999876
Q ss_pred ccccccceEEEeccCC---CCCCCCCHHHHHHHhhhhcCC--CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 038815 946 KQETFTRISGYCEQND---IHSPLVTVYESLLYSAWLRLP--PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLS 1020 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~lr~~--~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1020 (1436)
....-+..+|||||.. .-+| +||+|-+..+..-+.. ...+ ++.++.++++|+.+|+.+++|..+| .||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP-~tV~d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LS 141 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFP-ITVKDVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQIG-----ELS 141 (254)
T ss_pred cccccCCeEEEcCcccccCCCCC-cCHHHHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCccc-----ccC
Confidence 5443356899999954 3344 7999999876332221 1122 2336789999999999999999875 599
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||-|||||+++|++|+|||||+|+|+.++..++++|+++.++|+||++++||++ .+.+.||+
T Consensus 142 GGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~ 208 (254)
T COG1121 142 GGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDR 208 (254)
T ss_pred cHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCE
Confidence 99999999999999999999999999999999999999999999988999999999986 58899999
No 59
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=8.4e-38 Score=345.68 Aligned_cols=214 Identities=32% Similarity=0.410 Sum_probs=179.3
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCcc---ceEEEEc
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQ---RVAAYIS 245 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~ 245 (1436)
+++.-++++++||+|+|+.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.++..+ +.++|||
T Consensus 6 ~~ls~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vp 82 (258)
T COG1120 6 ENLSFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVP 82 (258)
T ss_pred EEEEEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEec
Confidence 34455667889999999999999999999999999999999999999997 99999999998876653 7899999
Q ss_pred CCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccc
Q 038815 246 QHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICA 325 (1436)
Q Consensus 246 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 325 (1436)
|.....+.+||+|-+.++..-+.. ... ....+....++..|+.+|+.+.+
T Consensus 83 Q~~~~~~~~tV~d~V~~GR~p~~~--------~~~----------------------~~~~~D~~~v~~aL~~~~~~~la 132 (258)
T COG1120 83 QSPSAPFGLTVYELVLLGRYPHLG--------LFG----------------------RPSKEDEEIVEEALELLGLEHLA 132 (258)
T ss_pred cCCCCCCCcEEeehHhhcCCcccc--------ccc----------------------CCCHhHHHHHHHHHHHhCcHHHh
Confidence 999888899999999987432100 000 00011123467889999999988
Q ss_pred cccccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 038815 326 DTLVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLF 400 (1436)
Q Consensus 326 ~t~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lf 400 (1436)
+..+ ..|||||||||.||+|++ |+||||||+||...+.++++.++++++..+ .++|++.|+.+.+..+|
T Consensus 133 ~r~~-----~~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~-~tvv~vlHDlN~A~rya 206 (258)
T COG1120 133 DRPV-----DELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKG-LTVVMVLHDLNLAARYA 206 (258)
T ss_pred cCcc-----cccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhC
Confidence 7654 469999999999998874 999999999999999999999999987544 55555789999999999
Q ss_pred CeEEEecCCeEEEecChHHHH
Q 038815 401 DDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 401 D~vilL~~G~iv~~G~~~~~~ 421 (1436)
|++++|++|+++.+|+++++.
T Consensus 207 d~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 207 DHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred CEEEEEECCeEEeecCcchhc
Confidence 999999999999999988775
No 60
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-37 Score=334.85 Aligned_cols=197 Identities=27% Similarity=0.383 Sum_probs=169.9
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCC
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDN 249 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~ 249 (1436)
.+.+.+....+|+|||++|++||+++|+||||||||||||+|+|+.+|+ +|+|.++|.++ ..+...++||+|++.
T Consensus 8 ~v~~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v--~~p~~~~~~vFQ~~~ 82 (248)
T COG1116 8 GVSKSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPV--TGPGPDIGYVFQEDA 82 (248)
T ss_pred eeEEEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccc--CCCCCCEEEEeccCc
Confidence 3445556688999999999999999999999999999999999999998 99999999987 345678999999999
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLV 329 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 329 (1436)
++|-+||+||+.|+...++... .+....++.+|+.+||.+..|
T Consensus 83 LlPW~Tv~~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~--- 125 (248)
T COG1116 83 LLPWLTVLDNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFED--- 125 (248)
T ss_pred ccchhhHHhhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhh---
Confidence 9999999999999987764211 112235678999999988765
Q ss_pred cCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 038815 330 GDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDII 404 (1436)
Q Consensus 330 g~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vi 404 (1436)
+++.+|||||||||+||||++ |+||||+++||+.|+.++.+.|.++.+..+ .+++.++|+-+|+..++|+|+
T Consensus 126 --~~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~-~TvllVTHdi~EAv~LsdRiv 202 (248)
T COG1116 126 --KYPHQLSGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETR-KTVLLVTHDVDEAVYLADRVV 202 (248)
T ss_pred --cCccccChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHhhhCEEE
Confidence 678899999999999998874 999999999999999999999999887655 555568999999999999999
Q ss_pred EecC--CeE
Q 038815 405 LLSD--GLI 411 (1436)
Q Consensus 405 lL~~--G~i 411 (1436)
+|++ |+|
T Consensus 203 vl~~~P~~i 211 (248)
T COG1116 203 VLSNRPGRI 211 (248)
T ss_pred EecCCCcce
Confidence 9998 455
No 61
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.3e-32 Score=372.81 Aligned_cols=201 Identities=23% Similarity=0.353 Sum_probs=171.2
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..++++|++..++. +++.+|+|+|+.+++||+++|+|||||||||||++|+|... +.+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 46888888876531 23579999999999999999999999999999999999876 358999999987
Q ss_pred ccc--ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 038815 945 KKQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTE 1022 (1436)
Q Consensus 945 ~~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1022 (1436)
... ...++.+|||+|++.+++.+||+|++.|.++++. .+.++.++.++++++.+||.+..|..+ +.||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 642 2346779999999999999999999999877653 223344567899999999998888764 579999
Q ss_pred HHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1023 qrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||+||+||+.+|+||+|||||+|||+.+++.+++.|++++ +|+|||+|+|++. ++-...|+
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDr 1129 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDR 1129 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999985 5999999999974 45556777
No 62
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-37 Score=337.07 Aligned_cols=186 Identities=27% Similarity=0.352 Sum_probs=165.4
Q ss_pred ceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc------ccccceEEEeccCCCCC
Q 038815 891 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ------ETFTRISGYCEQNDIHS 964 (1436)
Q Consensus 891 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~~~ 964 (1436)
...+|+|||+.|++||++||+|+||||||||++++.+... +.+|+|.++|.+... ..+|+.+|+++|+..++
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLL 95 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLL 95 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecccCChHHHHHHHhhccEEecccccc
Confidence 4679999999999999999999999999999999999876 458999999965432 34678999999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecC
Q 038815 965 PLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1044 (1436)
Q Consensus 965 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDE 1044 (1436)
...||+||+.|...+.. .++++++++|.++++.+||.+.++.. +.+|||||||||+|||||+.+|+||++||
T Consensus 96 ssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLSGGQKQRVaIARALa~~P~iLL~DE 167 (339)
T COG1135 96 SSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLSGGQKQRVAIARALANNPKILLCDE 167 (339)
T ss_pred ccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcCcchhhHHHHHHHHhcCCCEEEecC
Confidence 99999999999876653 66888999999999999999988876 56899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHH-Hhhh
Q 038815 1045 PTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFE-SFDE 1088 (1436)
Q Consensus 1045 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~-~FD~ 1088 (1436)
|||+||+.+...|.+.|+++.++ |.||++++|++ ++.. ..|+
T Consensus 168 aTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm--~Vvk~ic~r 211 (339)
T COG1135 168 ATSALDPETTQSILELLKDINRELGLTIVLITHEM--EVVKRICDR 211 (339)
T ss_pred ccccCChHHHHHHHHHHHHHHHHcCCEEEEEechH--HHHHHHhhh
Confidence 99999999999999999998765 99999999986 3444 3555
No 63
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5.1e-37 Score=314.23 Aligned_cols=198 Identities=26% Similarity=0.356 Sum_probs=170.8
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.|+||+-.+. +.+.+|+|||+.+++||++-|+|||||||||||++|.+... +..|+|.++|++..
T Consensus 2 I~f~~V~k~Y~------------~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYP------------GGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcC------------CCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 45677765443 23679999999999999999999999999999999999765 45799999998753
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 038815 947 Q------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLS 1020 (1436)
Q Consensus 947 ~------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1020 (1436)
. .-.+|.+|+|+||..+.+..||+||+.|...... .+..+.+++|.++|+.+||.+-++.+ +..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 2 2357899999999999999999999999866543 35566778899999999999988876 56899
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||+||||++.+|++|+.||||-+||+..+..||+++.++.+.|.|||+.+|+ .++.+...+
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd--~~lv~~~~~ 205 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHD--LELVNRMRH 205 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEecc--HHHHHhccC
Confidence 999999999999999999999999999999999999999999998899999999997 445555443
No 64
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-37 Score=319.21 Aligned_cols=224 Identities=27% Similarity=0.399 Sum_probs=178.7
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEEcCccCCCC-----CccceEEE
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF-----EPQRVAAY 243 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~y 243 (1436)
+..-++++++|+|||+.|+++++|+++|||||||||||++|....+ |..+++|+|.|+|+++.+. ..|+.+|+
T Consensus 13 l~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGM 92 (253)
T COG1117 13 LNLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGM 92 (253)
T ss_pred eeEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHhee
Confidence 3334567889999999999999999999999999999999998754 4568899999999998543 23688999
Q ss_pred EcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc-
Q 038815 244 ISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD- 322 (1436)
Q Consensus 244 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~- 322 (1436)
|+|.+.-|| +|++||+.|+.+.+|... + + .+.+++..|+.-+|-
T Consensus 93 VFQkPnPFp-~SIydNVayG~r~~g~~~--~---~-----------------------------ldeiVe~sLk~AaLWd 137 (253)
T COG1117 93 VFQKPNPFP-MSIYDNVAYGLRLHGIKD--K---E-----------------------------LDEIVESSLKKAALWD 137 (253)
T ss_pred eccCCCCCC-chHHHHHHHhHHhhccch--H---H-----------------------------HHHHHHHHHHHhHhHH
Confidence 999999999 999999999999887532 1 1 112233333333332
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
...|.+ ++...+|||||+||++|||++ |||||||||+|||.++.+|-+.+.++.+ .-+||.++|...++.
T Consensus 138 EVKDrL--~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAa 212 (253)
T COG1117 138 EVKDRL--HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAA 212 (253)
T ss_pred HhHHHh--hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHH
Confidence 122222 234557999999999999877 5999999999999999999999999753 345555899999999
Q ss_pred hhcCeEEEecCCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELVLDFFESMGFKCPERKGVADFLQ 442 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~ 442 (1436)
+..|+..++..|+++++|+++++ |..|..+.+.||+.
T Consensus 213 RvSD~taFf~~G~LvE~g~T~~i--------F~~P~~~~TedYis 249 (253)
T COG1117 213 RVSDYTAFFYLGELVEFGPTDKI--------FTNPKHKRTEDYIS 249 (253)
T ss_pred HHhHhhhhhcccEEEEEcCHHhh--------hcCccHHHHHHHhc
Confidence 99999999999999999999987 45677777777753
No 65
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.2e-36 Score=336.58 Aligned_cols=202 Identities=27% Similarity=0.375 Sum_probs=170.1
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++.+|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCch
Confidence 356788887664 4789999999999999999999999999999999999766 3579999999876
Q ss_pred cc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCC-CCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 946 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPE-VDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~-~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
.. +.+.+.+|||||.......+||+|.+.++..-..... ...++..+.++++|+.+|+.++++..+ ..|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccCh
Confidence 43 4578899999999988889999999988743221111 123334457999999999999999874 57999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||.|||||+++|+||+||||||+||...+..+++.++++++ +|.|||+++||++. ....-|+
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~ 208 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADH 208 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCE
Confidence 999999999999999999999999999999999999999999985 59999999999864 3444565
No 66
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.1e-36 Score=321.90 Aligned_cols=200 Identities=28% Similarity=0.382 Sum_probs=174.3
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+++++++.+. +.+.+|+|||+.|++||+++||||||+||||||+.|.|... +.+|+|.++|.+.
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcch
Confidence 56777776543 56889999999999999999999999999999999999876 4589999999875
Q ss_pred cc------ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCC
Q 038815 946 KQ------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPL-RQSLVGLPGVSG 1018 (1436)
Q Consensus 946 ~~------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~ 1018 (1436)
.+ ...++.+|+++|+-.+|..+||+||+.|. +|.....+++..++.+..-|+.+||... ++.. +++
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafp--lre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFP--LREHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhhee--hHhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 43 13567899999999999999999999885 3444556777888888889999999887 5554 578
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1019 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1019 lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||+|||+++||||+.+|+|||+||||+|||+.++..+.++|+++.++ |.|++++|||-. +++..-|+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Dr 215 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADR 215 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhce
Confidence 9999999999999999999999999999999999999999999999876 999999999964 57777787
No 67
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=312.82 Aligned_cols=208 Identities=31% Similarity=0.333 Sum_probs=179.0
Q ss_pred cccccccce-eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC--CccceEEEEcCC
Q 038815 171 LPTRKKHLT-ILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF--EPQRVAAYISQH 247 (1436)
Q Consensus 171 ~~~~~~~~~-iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~ 247 (1436)
+.++++.++ +++||||+++.||+++|+|||||||||+|++|++++.|+ +|+|+++|.+..+. ..++.+|.++.+
T Consensus 7 l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e 83 (245)
T COG4555 7 LTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGE 83 (245)
T ss_pred hhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCC
Confidence 344544444 999999999999999999999999999999999999998 99999999987543 346889999888
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
-.++..||++|||.|.+++.+.. + .+.+.+++.+.+.|+|..|.|+
T Consensus 84 ~glY~RlT~rEnl~~Fa~L~~l~----------~------------------------~~~kari~~l~k~l~l~~~~~r 129 (245)
T COG4555 84 RGLYARLTARENLKYFARLNGLS----------R------------------------KEIKARIAELSKRLQLLEYLDR 129 (245)
T ss_pred cChhhhhhHHHHHHHHHHHhhhh----------h------------------------hHHHHHHHHHHHHhChHHHHHH
Confidence 88999999999999998876532 1 1234557889999999999999
Q ss_pred cccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
.+| ++|-|+||||+||||++ +++||||||||..++..+-+.++++.. .+.+|+..+|..+|+.++||+
T Consensus 130 Rv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~--egr~viFSSH~m~EvealCDr 202 (245)
T COG4555 130 RVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN--EGRAVIFSSHIMQEVEALCDR 202 (245)
T ss_pred HHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc--CCcEEEEecccHHHHHHhhhe
Confidence 988 59999999999999885 999999999999999999999998643 245555678999999999999
Q ss_pred EEEecCCeEEEecChHHHHH
Q 038815 403 IILLSDGLIVYLGPRELVLD 422 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~~ 422 (1436)
|++|++|++++.|+.+++..
T Consensus 203 vivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 203 VIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred EEEEecCcEEEcCCHHHHHH
Confidence 99999999999999987753
No 68
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-36 Score=318.62 Aligned_cols=219 Identities=26% Similarity=0.341 Sum_probs=177.9
Q ss_pred ccccccc-ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc------cceE
Q 038815 169 QILPTRK-KHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP------QRVA 241 (1436)
Q Consensus 169 ~~~~~~~-~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~~ 241 (1436)
+++.+.+ .++++|+|||+.|++|||++|+|||||||||||++|.|..+++ +|+|.+||.++..... ++.+
T Consensus 7 ~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~i 83 (258)
T COG3638 7 KNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDI 83 (258)
T ss_pred eeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhc
Confidence 3445555 6778999999999999999999999999999999999999987 9999999988765542 4689
Q ss_pred EEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCC
Q 038815 242 AYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGL 321 (1436)
Q Consensus 242 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL 321 (1436)
||++|++.+.+.+||.+|+..+..-+.. .+. .-.++.+ .+.+..+-..|+.+|+
T Consensus 84 GmIfQ~~nLv~r~sv~~NVl~grl~~~s--~~~---------slfglfs---------------k~dk~~Al~aLervgi 137 (258)
T COG3638 84 GMIFQQFNLVPRLSVLENVLLGRLGYTS--TWR---------SLFGLFS---------------KEDKAQALDALERVGI 137 (258)
T ss_pred eeEeccCCcccccHHHHHHHhhhcccch--HHH---------HHhCCCC---------------HHHHHHHHHHHHHcCc
Confidence 9999999999999999999987543211 000 0001111 1112234557899999
Q ss_pred cccccccccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 038815 322 DICADTLVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPET 396 (1436)
Q Consensus 322 ~~~~~t~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~ 396 (1436)
.+.+.+..+ .|||||+|||+|||+++ ++.|||++.||+.++.++++.|++++...+.|+|+. +|..+-+
T Consensus 138 ~~~A~qra~-----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~n-LH~vdlA 211 (258)
T COG3638 138 LDKAYQRAS-----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVN-LHQVDLA 211 (258)
T ss_pred HHHHHHHhc-----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEE-echHHHH
Confidence 988877665 59999999999999885 999999999999999999999999998766666664 5667889
Q ss_pred HhhcCeEEEecCCeEEEecChHHHHH
Q 038815 397 YDLFDDIILLSDGLIVYLGPRELVLD 422 (1436)
Q Consensus 397 ~~lfD~vilL~~G~iv~~G~~~~~~~ 422 (1436)
.++||||+-|++|+|+|.||++++.+
T Consensus 212 ~~Y~~Riigl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 212 KKYADRIIGLKAGRIVFDGPASELTD 237 (258)
T ss_pred HHHHhhheEecCCcEEEeCChhhhhH
Confidence 99999999999999999999988654
No 69
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-36 Score=313.29 Aligned_cols=194 Identities=24% Similarity=0.342 Sum_probs=165.2
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCC---CCCeeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~---~~~~~~G~i~i~g 942 (1436)
.++.+|++.++. .+.+|+|||+.|+++++|||||||||||||||++|.... ++-.++|+|.++|
T Consensus 7 ~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 567778876653 467999999999999999999999999999999999753 3346899999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGV 1016 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 1016 (1436)
..+-. ..+||.+|.|+|.+.-|| +|++||+.|+.++..-.+ ++-++.|++.|+...|++ ..|.+-.. .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s--a 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS--A 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--c
Confidence 76532 357899999999999999 999999999987764332 567788999999999976 34444322 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCC
Q 038815 1017 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPS 1079 (1436)
Q Consensus 1017 ~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps 1079 (1436)
.+|||||+|||||||+|+-+|+||+||||||+||+.+...|.+++.++.+ .-|||++||.+.
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~-~yTIviVTHnmq 209 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK-KYTIVIVTHNMQ 209 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh-ccEEEEEeCCHH
Confidence 57999999999999999999999999999999999999999999999974 789999999753
No 70
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.6e-36 Score=323.55 Aligned_cols=192 Identities=30% Similarity=0.420 Sum_probs=161.3
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-------cceEEEEcCCCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-------QRVAAYISQHDN 249 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 249 (1436)
..++|+|||+.|++||+++|+|||||||||||++|+|...|+ +|+|.++|.++..... ++.+|||+|+..
T Consensus 17 ~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~n 93 (226)
T COG1136 17 KVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFN 93 (226)
T ss_pred ceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCC
Confidence 368999999999999999999999999999999999999997 9999999998876543 357999999999
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLV 329 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 329 (1436)
++|++||+||+...+...+.... +.....+.+++.+||++..+
T Consensus 94 Ll~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~--- 136 (226)
T COG1136 94 LLPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLL--- 136 (226)
T ss_pred CCCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhc---
Confidence 99999999999987765543210 12234567899999986554
Q ss_pred cCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 038815 330 GDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDII 404 (1436)
Q Consensus 330 g~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vi 404 (1436)
+.++..|||||||||+||||++ ++.||||.+||+.++..+++.++++++..+.| +++++|+ +++...|||++
T Consensus 137 -~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~t-ii~VTHd-~~lA~~~dr~i 213 (226)
T COG1136 137 -KKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKT-IIMVTHD-PELAKYADRVI 213 (226)
T ss_pred -cCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCE-EEEEcCC-HHHHHhCCEEE
Confidence 2456689999999999999885 99999999999999999999999998754444 4446665 46778999999
Q ss_pred EecCCeE
Q 038815 405 LLSDGLI 411 (1436)
Q Consensus 405 lL~~G~i 411 (1436)
.|.+|++
T Consensus 214 ~l~dG~~ 220 (226)
T COG1136 214 ELKDGKI 220 (226)
T ss_pred EEeCCee
Confidence 9999984
No 71
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-36 Score=321.63 Aligned_cols=187 Identities=28% Similarity=0.365 Sum_probs=167.0
Q ss_pred ceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc---ccccceEEEeccCCCCCCCC
Q 038815 891 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ---ETFTRISGYCEQNDIHSPLV 967 (1436)
Q Consensus 891 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~l 967 (1436)
++.+++|+|++|++||+++++|||||||||+|++|.+..+ +.+|+|.+||.+... ...||.+|||-|.-.+||++
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh~ 90 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPHL 90 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecccCCHHHHHHhhhhhhhhcccCCCc
Confidence 5689999999999999999999999999999999999876 458999999987654 45789999999999999999
Q ss_pred CHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc--ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCC
Q 038815 968 TVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP--LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1045 (1436)
Q Consensus 968 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEP 1045 (1436)
||.||+.+--.+. ..++++.+++++|+|+++||.+ +++.. +++|||||+|||-+||||+++|+||+||||
T Consensus 91 Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSGGQQQRVGv~RALAadP~ilLMDEP 162 (309)
T COG1125 91 TVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSGGQQQRVGVARALAADPPILLMDEP 162 (309)
T ss_pred cHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCcchhhHHHHHHHHhcCCCeEeecCC
Confidence 9999998765543 3467788899999999999985 66665 578999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1046 TSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1046 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+++||+.++..+++-++++.+. |+|||++|||.. |-+.+=|+
T Consensus 163 FgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadr 205 (309)
T COG1125 163 FGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADR 205 (309)
T ss_pred ccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhce
Confidence 9999999999999999998765 999999999964 56677777
No 72
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-36 Score=329.16 Aligned_cols=190 Identities=28% Similarity=0.415 Sum_probs=171.5
Q ss_pred CceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCe---eccc-ccccceEEEeccCCCCCC
Q 038815 890 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGY---LKKQ-ETFTRISGYCEQNDIHSP 965 (1436)
Q Consensus 890 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~d~~~~ 965 (1436)
+...+++|||+.|+.||++||+|||||||||||++|||..+ +..|.|.+||. +... ....|.+|||+|+..+++
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 45678999999999999999999999999999999999887 45799999998 4433 345688999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCC
Q 038815 966 LVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1045 (1436)
Q Consensus 966 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEP 1045 (1436)
++||.+|+.|+.+.+ ....+..+.+.+|+++|+.+.|+++++.. +..|||||||||++||||+..|++|+||||
T Consensus 91 HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEP 164 (345)
T COG1118 91 HMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEP 164 (345)
T ss_pred cchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCC
Confidence 999999999998777 33345667788999999999999999887 578999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1046 TSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1046 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.++||+.-...+.+.|+++.+. |.|+|++|||+ .++++.+|+
T Consensus 165 f~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~-eea~~ladr 207 (345)
T COG1118 165 FGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQ-EEALELADR 207 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCH-HHHHhhcce
Confidence 9999999999999999999875 99999999997 589999999
No 73
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.1e-36 Score=341.66 Aligned_cols=184 Identities=29% Similarity=0.408 Sum_probs=169.0
Q ss_pred EeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc-ccccceEEEeccCCCCCCCCCHHHH
Q 038815 894 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ-ETFTRISGYCEQNDIHSPLVTVYES 972 (1436)
Q Consensus 894 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~E~ 972 (1436)
+|+|||+.|+.||+++|+|||||||||||++|||... +.+|+|.|+|.+.+. ...+|.+|+|+|+..++|++||+||
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~N 95 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYEN 95 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHHH
Confidence 9999999999999999999999999999999999876 468999999998765 3456899999999999999999999
Q ss_pred HHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHH
Q 038815 973 LLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1052 (1436)
Q Consensus 973 l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~ 1052 (1436)
+.|+.+.+. .++++.+++|+++.+.|+|.++.|.. +++|||||||||+|||||+++|++++||||.|+||+.
T Consensus 96 iaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~ 167 (338)
T COG3839 96 IAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAK 167 (338)
T ss_pred hhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHH
Confidence 999987663 45678888999999999999999987 4789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1053 AAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1053 ~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
....+...|+++.++ |.|+|.+|||. .|...+-|+
T Consensus 168 lR~~mr~ei~~lh~~l~~T~IYVTHDq-~EAmtladr 203 (338)
T COG3839 168 LRVLMRSEIKKLHERLGTTTIYVTHDQ-VEAMTLADR 203 (338)
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEcCCH-HHHHhhCCE
Confidence 999999999998765 89999999996 578888998
No 74
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-35 Score=325.78 Aligned_cols=212 Identities=28% Similarity=0.423 Sum_probs=173.6
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCC
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHD 248 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d 248 (1436)
+++.-.+...++|+|||+.|++|++++|+||||||||||+|+|.|.++|. +|+|.++|.+......+..+|||||..
T Consensus 8 ~nl~v~y~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~ 84 (254)
T COG1121 8 ENLTVSYGNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKS 84 (254)
T ss_pred eeeEEEECCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCccc
Confidence 34444555336999999999999999999999999999999999999998 999999999887776677899999953
Q ss_pred --CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccc
Q 038815 249 --NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICAD 326 (1436)
Q Consensus 249 --~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 326 (1436)
.+-..+||+|.+..+..-+. + .....++ +....+++.|+.+|+.+.+|
T Consensus 85 ~~d~~fP~tV~d~V~~g~~~~~-g----~~~~~~~-------------------------~d~~~v~~aL~~Vgm~~~~~ 134 (254)
T COG1121 85 SVDRSFPITVKDVVLLGRYGKK-G----WFRRLNK-------------------------KDKEKVDEALERVGMEDLRD 134 (254)
T ss_pred ccCCCCCcCHHHHHHccCcccc-c----ccccccH-------------------------HHHHHHHHHHHHcCchhhhC
Confidence 33344799999988632211 0 0001111 12345788999999999888
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
..+| .|||||+|||-||||++ |+|||||+|+|+.++..|++.|+++.+. +.+|++++|+...+.++||
T Consensus 135 r~i~-----~LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D 207 (254)
T COG1121 135 RQIG-----ELSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFD 207 (254)
T ss_pred Cccc-----ccCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCC
Confidence 7776 59999999999999885 9999999999999999999999999775 5566668999999999999
Q ss_pred eEEEecCCeEEEecChHHHH
Q 038815 402 DIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 402 ~vilL~~G~iv~~G~~~~~~ 421 (1436)
+|+.|++ ++++.|+++++.
T Consensus 208 ~vi~Ln~-~~~~~G~~~~~~ 226 (254)
T COG1121 208 RVICLNR-HLIASGPPEEVL 226 (254)
T ss_pred EEEEEcC-eeEeccChhhcc
Confidence 9999986 788999998874
No 75
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=348.44 Aligned_cols=210 Identities=25% Similarity=0.386 Sum_probs=177.9
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCC
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQH 247 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~ 247 (1436)
+++.+++++..+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|+
T Consensus 10 ~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~ 86 (351)
T PRK11432 10 KNITKRFGSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQS 86 (351)
T ss_pred EeEEEEECCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCC
Confidence 34555555677999999999999999999999999999999999999998 9999999998876554 3789999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
..+||++||+||+.|+.+.++... .+.+..++++++.+||.+..+
T Consensus 87 ~~lfp~~tv~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~- 131 (351)
T PRK11432 87 YALFPHMSLGENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFED- 131 (351)
T ss_pred cccCCCCCHHHHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhc-
Confidence 999999999999999875432110 112234678899999987655
Q ss_pred cccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
+.++.|||||||||+|||+++ |+|||||+|||+.++.++.+.|+++.+..+ ++++.++|+..++.+++|+
T Consensus 132 ----r~~~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~e~~~laD~ 206 (351)
T PRK11432 132 ----RYVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFN-ITSLYVTHDQSEAFAVSDT 206 (351)
T ss_pred ----CChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCE
Confidence 456689999999999988775 999999999999999999999999866434 4556688999999999999
Q ss_pred EEEecCCeEEEecChHHHH
Q 038815 403 IILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~ 421 (1436)
|++|++|+++..|+++++.
T Consensus 207 i~vm~~G~i~~~g~~~~~~ 225 (351)
T PRK11432 207 VIVMNKGKIMQIGSPQELY 225 (351)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999998873
No 76
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.8e-35 Score=348.67 Aligned_cols=210 Identities=28% Similarity=0.423 Sum_probs=177.4
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCC
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQH 247 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~ 247 (1436)
+++.++++.+.+|+|+|+++++||+++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ ++.++||+|+
T Consensus 8 ~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~ 84 (353)
T TIGR03265 8 DNIRKRFGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQS 84 (353)
T ss_pred EEEEEEeCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCC
Confidence 34455555677999999999999999999999999999999999999987 9999999998865444 4679999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
..+||.+||+||+.|+.+.++.. + .+.+..++++++.+||++..|.
T Consensus 85 ~~lfp~~tv~eNi~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~l~L~~~~~~ 130 (353)
T TIGR03265 85 YALFPNLTVADNIAYGLKNRGMG----------R------------------------AEVAERVAELLDLVGLPGSERK 130 (353)
T ss_pred cccCCCCcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCCchhhC
Confidence 99999999999999986543210 0 0122346788999999887664
Q ss_pred cccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
.++.|||||||||+|||+++ +|||||+++||..++.++.+.|+++.+..+ +++|.++|+..++..++|+
T Consensus 131 -----~~~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~-~tvi~vTHd~~ea~~l~d~ 204 (353)
T TIGR03265 131 -----YPGQLSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLG-VTTIMVTHDQEEALSMADR 204 (353)
T ss_pred -----ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCE
Confidence 45689999999999988775 999999999999999999999999866444 4555578899999999999
Q ss_pred EEEecCCeEEEecChHHHH
Q 038815 403 IILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~ 421 (1436)
|++|++|+++..|+++++.
T Consensus 205 i~vl~~G~i~~~g~~~~~~ 223 (353)
T TIGR03265 205 IVVMNHGVIEQVGTPQEIY 223 (353)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999998874
No 77
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-35 Score=348.99 Aligned_cols=209 Identities=26% Similarity=0.388 Sum_probs=175.8
Q ss_pred cccccc-ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCC
Q 038815 170 ILPTRK-KHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQH 247 (1436)
Q Consensus 170 ~~~~~~-~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~ 247 (1436)
++.+++ .++.+|+|+|+++++||+++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++||+|+
T Consensus 8 ~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~ 84 (356)
T PRK11650 8 AVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQN 84 (356)
T ss_pred eEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCC
Confidence 344444 4567999999999999999999999999999999999999987 9999999998866544 4689999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
+.++|.+||+||+.|+.+.++.. + .+....++++++.+||++..+.
T Consensus 85 ~~lfp~~tv~eNi~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~ 130 (356)
T PRK11650 85 YALYPHMSVRENMAYGLKIRGMP----------K------------------------AEIEERVAEAARILELEPLLDR 130 (356)
T ss_pred ccccCCCCHHHHHHhHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCChhHhhC
Confidence 99999999999999986543210 0 0122346778999999876654
Q ss_pred cccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
.++.|||||||||+||||+ +|+|||||++||+.++.++.+.|+++.+.. +++++.++|+..++.+++|+
T Consensus 131 -----~~~~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~l~D~ 204 (356)
T PRK11650 131 -----KPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRL-KTTSLYVTHDQVEAMTLADR 204 (356)
T ss_pred -----ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCE
Confidence 4568999999999998877 499999999999999999999999986643 45566688899999999999
Q ss_pred EEEecCCeEEEecChHHHH
Q 038815 403 IILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~ 421 (1436)
|++|++|+++..|+++++.
T Consensus 205 i~vl~~G~i~~~g~~~~~~ 223 (356)
T PRK11650 205 VVVMNGGVAEQIGTPVEVY 223 (356)
T ss_pred EEEEeCCEEEEECCHHHHH
Confidence 9999999999999998873
No 78
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-35 Score=340.38 Aligned_cols=200 Identities=28% Similarity=0.377 Sum_probs=176.8
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|++-.+ +...+|+|||+.|++||+++|+|||||||||||++|||... +.+|+|.++|.+.
T Consensus 5 ~l~i~~v~k~y-------------g~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSF-------------GDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeec-------------CCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 56777776443 35789999999999999999999999999999999999877 4579999999987
Q ss_pred cc-ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 038815 946 KQ-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQR 1024 (1436)
Q Consensus 946 ~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1024 (1436)
.. ...+|.+|+|+|+-.+||++||+||+.|+.+++ ....+++.+++|++++++++|.+.++.. +..||||||
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHH
Confidence 54 346789999999999999999999999997643 3345567888999999999999998887 468999999
Q ss_pred HHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1025 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1025 kRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||||+.+|++|+||||.|+||..-+..+..-|+++.++ |.|.|++|||. .|-+.+=|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDq-eEAl~msDr 206 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQ-EEALAMSDR 206 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCH-HHHhhhccc
Confidence 9999999999999999999999999999999999999998764 99999999996 467788888
No 79
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4.1e-35 Score=347.57 Aligned_cols=210 Identities=25% Similarity=0.357 Sum_probs=177.5
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcc--cEEEEcCccCCCCCc-cceEEEEcC
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVS--GRVTYNGHNMDEFEP-QRVAAYISQ 246 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~--G~I~~~G~~~~~~~~-~~~~~yv~Q 246 (1436)
++.++++...+|+|+|++|++||+++|+|||||||||||++|+|..+|+ + |+|.++|.++....+ ++.++||+|
T Consensus 10 ~l~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ 86 (362)
T TIGR03258 10 HLRVAYGANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQ 86 (362)
T ss_pred EEEEEECCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEEC
Confidence 4445555567999999999999999999999999999999999999987 7 999999998865443 467999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccc
Q 038815 247 HDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICAD 326 (1436)
Q Consensus 247 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 326 (1436)
+..++|.+||+||+.|+.+.++.. + .+.+..++++++.+||++..|
T Consensus 87 ~~~l~p~~tv~enl~~~l~~~~~~----------~------------------------~~~~~~v~~~l~~~gL~~~~~ 132 (362)
T TIGR03258 87 NYALFPHLKVEDNVAFGLRAQKMP----------K------------------------ADIAERVADALKLVGLGDAAA 132 (362)
T ss_pred CcccCCCCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHhcCCCchhh
Confidence 999999999999999986543211 0 012234678899999988766
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
. .++.|||||||||+|||+++ |+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|
T Consensus 133 ~-----~~~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~d 207 (362)
T TIGR03258 133 H-----LPAQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLAD 207 (362)
T ss_pred C-----ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCC
Confidence 4 45679999999999988774 9999999999999999999999998764325566668899999999999
Q ss_pred eEEEecCCeEEEecChHHHH
Q 038815 402 DIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 402 ~vilL~~G~iv~~G~~~~~~ 421 (1436)
+|++|++|+++..|+++++.
T Consensus 208 ri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 208 KAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred EEEEEECCEEEEEcCHHHHH
Confidence 99999999999999998874
No 80
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7.2e-35 Score=346.63 Aligned_cols=223 Identities=26% Similarity=0.351 Sum_probs=184.0
Q ss_pred ccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcC
Q 038815 168 LQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQ 246 (1436)
Q Consensus 168 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q 246 (1436)
++++.++++++++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|
T Consensus 17 l~~l~~~~~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ 93 (375)
T PRK09452 17 LRGISKSFDGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQ 93 (375)
T ss_pred EEEEEEEECCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEec
Confidence 344555555677999999999999999999999999999999999999987 9999999998865544 467999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccc
Q 038815 247 HDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICAD 326 (1436)
Q Consensus 247 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 326 (1436)
++.+||.+||+||+.|+.+.++.. + .+....++++++.+||++..+
T Consensus 94 ~~~lfp~ltv~eNi~~~l~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~ 139 (375)
T PRK09452 94 SYALFPHMTVFENVAFGLRMQKTP----------A------------------------AEITPRVMEALRMVQLEEFAQ 139 (375)
T ss_pred CcccCCCCCHHHHHHHHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhh
Confidence 999999999999999986533211 0 011234677899999987666
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
. ++..|||||||||+|||+++ |+||||++|||..++.++.+.|+++.+.. ++++|.++|+..++..++|
T Consensus 140 ~-----~p~~LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laD 213 (375)
T PRK09452 140 R-----KPHQLSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSD 213 (375)
T ss_pred C-----ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCC
Confidence 4 45689999999999988774 99999999999999999999999987644 4555668899999999999
Q ss_pred eEEEecCCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHH
Q 038815 402 DIILLSDGLIVYLGPRELVLDFFESMGFKCPERKGVADFL 441 (1436)
Q Consensus 402 ~vilL~~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl 441 (1436)
+|++|++|+++..|+++++. ..|....+++|+
T Consensus 214 ri~vl~~G~i~~~g~~~~i~--------~~p~~~~~a~~~ 245 (375)
T PRK09452 214 RIVVMRDGRIEQDGTPREIY--------EEPKNLFVARFI 245 (375)
T ss_pred EEEEEECCEEEEEcCHHHHH--------hCcccHHHHHhc
Confidence 99999999999999998873 345555556654
No 81
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=7.6e-35 Score=339.88 Aligned_cols=211 Identities=27% Similarity=0.372 Sum_probs=177.0
Q ss_pred ccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC--ccceEEEEc
Q 038815 168 LQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE--PQRVAAYIS 245 (1436)
Q Consensus 168 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~ 245 (1436)
++++.++++++.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++
T Consensus 10 i~~l~k~~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~ 86 (306)
T PRK13537 10 FRNVEKRYGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVP 86 (306)
T ss_pred EEeEEEEECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEe
Confidence 345566666678999999999999999999999999999999999999998 999999999875432 246799999
Q ss_pred CCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccc
Q 038815 246 QHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICA 325 (1436)
Q Consensus 246 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 325 (1436)
|++.+++.+||+||+.|.++.++... .+....++.+++.+||.+..
T Consensus 87 q~~~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~ 132 (306)
T PRK13537 87 QFDNLDPDFTVRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKA 132 (306)
T ss_pred ccCcCCCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHh
Confidence 99999999999999998665443110 01122356788999998877
Q ss_pred cccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 038815 326 DTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLF 400 (1436)
Q Consensus 326 ~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lf 400 (1436)
++.++ +|||||||||+||+|+ +++|||||+|||+.++.++.+.|+++.+ . +++|+.++|..+++.++|
T Consensus 133 ~~~~~-----~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~till~sH~l~e~~~~~ 205 (306)
T PRK13537 133 DAKVG-----ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-R-GKTILLTTHFMEEAERLC 205 (306)
T ss_pred cCchh-----hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhC
Confidence 76654 6999999999998777 4999999999999999999999999854 3 455666788999999999
Q ss_pred CeEEEecCCeEEEecChHHHHH
Q 038815 401 DDIILLSDGLIVYLGPRELVLD 422 (1436)
Q Consensus 401 D~vilL~~G~iv~~G~~~~~~~ 422 (1436)
|+|++|++|++++.|+++++..
T Consensus 206 d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 206 DRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred CEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999988754
No 82
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-35 Score=312.46 Aligned_cols=205 Identities=27% Similarity=0.312 Sum_probs=168.0
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|++-.++ +++++|+|||+.|++||++||+|||||||||||++|.|... +.+|+|.+||...
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 467788776553 45789999999999999999999999999999999999665 4579999999643
Q ss_pred cc------ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCC-----CCCCHHHHHHHHHHHHHHcCCCcccccccCCC
Q 038815 946 KQ------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLP-----PEVDSETRKMFIEEIMELVELNPLRQSLVGLP 1014 (1436)
Q Consensus 946 ~~------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 1014 (1436)
.. ..+++.+||++|+..+.+.+||.||+..+..-+.+ -....++.+...-+.|+.+|+.+.+-+..
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 21 34678999999999999999999999865322211 11222334455678999999999887764
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhhhc
Q 038815 1015 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDEAI 1090 (1436)
Q Consensus 1015 ~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~~~ 1090 (1436)
..|||||+|||+|||+|+++|+||+.|||+++||+.++..||+.|+++.+ .|.|||++.||-.. .-+.||+.+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Rii 219 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRII 219 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhhe
Confidence 46999999999999999999999999999999999999999999999986 49999999999642 345677743
No 83
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.3e-34 Score=340.61 Aligned_cols=201 Identities=24% Similarity=0.336 Sum_probs=170.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc------cceEEEEcCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP------QRVAAYISQHDNHI 251 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 251 (1436)
+++|+|||++|++||+++|+|||||||||||++|+|..+|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 57999999999999999999999999999999999999997 9999999998865432 45799999999999
Q ss_pred CCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccC
Q 038815 252 GEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGD 331 (1436)
Q Consensus 252 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 331 (1436)
+.+||+||+.|+....+.. + .+....+.++++.+||.+..|.
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------~------------------------~~~~~~v~e~l~~vgL~~~~~~---- 136 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTP----------K------------------------DEIKRKVTELLALVGLGDKHDS---- 136 (343)
T ss_pred ccCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhC----
Confidence 9999999999875433210 0 0112345678999999876664
Q ss_pred cccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 038815 332 EMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILL 406 (1436)
Q Consensus 332 ~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL 406 (1436)
.++.|||||||||+||||+ +|+|||||+|||+.++.++.+.|+++.+..+. +|+.++|..+.+.++||+|++|
T Consensus 137 -~~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~-tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 137 -YPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGL-TILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred -ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHhCCEEEEE
Confidence 4568999999999998877 49999999999999999999999998764444 4555788899999999999999
Q ss_pred cCCeEEEecChHHHH
Q 038815 407 SDGLIVYLGPRELVL 421 (1436)
Q Consensus 407 ~~G~iv~~G~~~~~~ 421 (1436)
++|++++.|+.+++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998863
No 84
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=7.3e-35 Score=298.43 Aligned_cols=201 Identities=25% Similarity=0.362 Sum_probs=173.1
Q ss_pred cccccc-cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc------cceEEE
Q 038815 171 LPTRKK-HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP------QRVAAY 243 (1436)
Q Consensus 171 ~~~~~~-~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~y 243 (1436)
+.+++. ..++|+|||+.|++||++.|+||||||||||||+|.+...|+ +|+|.+||+++..... +|.+|+
T Consensus 7 V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGv 83 (223)
T COG2884 7 VSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGV 83 (223)
T ss_pred hhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeee
Confidence 344432 355999999999999999999999999999999999999998 9999999999865432 588999
Q ss_pred EcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc
Q 038815 244 ISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI 323 (1436)
Q Consensus 244 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 323 (1436)
|+||..+++..||.||++|+.+..|... .+++..+.++|+..||.+
T Consensus 84 VFQD~rLL~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~ 129 (223)
T COG2884 84 VFQDFRLLPDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKH 129 (223)
T ss_pred EeeeccccccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccch
Confidence 9999999999999999999988775421 123456778999999998
Q ss_pred cccccccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 038815 324 CADTLVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 398 (1436)
Q Consensus 324 ~~~t~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 398 (1436)
.++ ..+..|||||||||+||||.| |+.||||.+||+.++.+|++.+.++.. .+|+|++.+|+..-+-.
T Consensus 130 k~~-----~lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~ 202 (223)
T COG2884 130 KAR-----ALPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNR 202 (223)
T ss_pred hhh-----cCccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHh
Confidence 776 456789999999999998875 999999999999999999999999864 46777778899988889
Q ss_pred hcCeEEEecCCeEEEec
Q 038815 399 LFDDIILLSDGLIVYLG 415 (1436)
Q Consensus 399 lfD~vilL~~G~iv~~G 415 (1436)
+-.+++.|++|+++...
T Consensus 203 ~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 203 MRHRVLALEDGRLVRDE 219 (223)
T ss_pred ccCcEEEEeCCEEEecc
Confidence 99999999999998764
No 85
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.2e-35 Score=311.80 Aligned_cols=200 Identities=28% Similarity=0.325 Sum_probs=171.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC----ccceEEEEcCCC--CCCC
Q 038815 179 TILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE----PQRVAAYISQHD--NHIG 252 (1436)
Q Consensus 179 ~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d--~~~~ 252 (1436)
++|+|||++|.+||..+|+|+||||||||.++|+|..+|+ +|+|+++|.+..... ..+.+.+|+||+ .+.|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 5999999999999999999999999999999999999998 999999998765542 346789999997 5789
Q ss_pred CCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCc
Q 038815 253 EMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDE 332 (1436)
Q Consensus 253 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 332 (1436)
..||++.|.-+.+..+.+. ....+.++|+.+||+... -++
T Consensus 98 ~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~----l~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSF----LDR 137 (252)
T ss_pred chhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHH----Hhc
Confidence 9999999987665433211 111256789999998643 356
Q ss_pred ccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
++..|||||||||+||||++ |++|||||+||++.+.+|++.|.++.+. .+.+++.++|+..-+..+||||++|+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~-~~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKE-RGLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHh-cCceEEEEeCcHHHHHHHhhheeeee
Confidence 78899999999999998875 9999999999999999999999998765 55666779999999999999999999
Q ss_pred CCeEEEecChHHHHH
Q 038815 408 DGLIVYLGPRELVLD 422 (1436)
Q Consensus 408 ~G~iv~~G~~~~~~~ 422 (1436)
+|++++.++++++.+
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999998864
No 86
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.1e-34 Score=340.43 Aligned_cols=203 Identities=22% Similarity=0.324 Sum_probs=172.6
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-------cceEEEEcCCC
Q 038815 176 KHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-------QRVAAYISQHD 248 (1436)
Q Consensus 176 ~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 248 (1436)
+.+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~ 80 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQF 80 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCC
Confidence 4566999999999999999999999999999999999999997 9999999999876543 46799999999
Q ss_pred CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccc
Q 038815 249 NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTL 328 (1436)
Q Consensus 249 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 328 (1436)
.++|.+||+||+.|+.+..+.. + .+....+.++++.+||++..+.
T Consensus 81 ~l~~~~TV~eNi~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~vgL~~~~~~- 125 (363)
T TIGR01186 81 ALFPHMTILQNTSLGPELLGWP----------E------------------------QERKEKALELLKLVGLEEYEHR- 125 (363)
T ss_pred cCCCCCCHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHhcCCchhhhC-
Confidence 9999999999999976543211 0 0112345778999999876654
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
.+..|||||||||+||+|+ ++||||||+|||+.++.++.+.++++.+..+ .+|+.++|+..++..++|+|
T Consensus 126 ----~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~-~Tii~vTHd~~ea~~~~drI 200 (363)
T TIGR01186 126 ----YPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQ-KTIVFITHDLDEAIRIGDRI 200 (363)
T ss_pred ----ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEE
Confidence 4557999999999998877 4999999999999999999999998865434 45556889999999999999
Q ss_pred EEecCCeEEEecChHHHH
Q 038815 404 ILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~~ 421 (1436)
++|++|+++..|+++++.
T Consensus 201 ~vl~~G~iv~~g~~~ei~ 218 (363)
T TIGR01186 201 VIMKAGEIVQVGTPDEIL 218 (363)
T ss_pred EEEeCCEEEeeCCHHHHH
Confidence 999999999999998875
No 87
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2e-34 Score=341.38 Aligned_cols=213 Identities=28% Similarity=0.384 Sum_probs=175.5
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCCC
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQHD 248 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d 248 (1436)
++.++++.+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++
T Consensus 7 ~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~ 83 (353)
T PRK10851 7 NIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHY 83 (353)
T ss_pred EEEEEeCCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCc
Confidence 3444455567999999999999999999999999999999999999987 9999999998865443 36799999999
Q ss_pred CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccc
Q 038815 249 NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTL 328 (1436)
Q Consensus 249 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 328 (1436)
.++|.+||+||+.|+.+....... ..+ .+....++.+++.+||++..+
T Consensus 84 ~l~p~~tv~eni~~~~~~~~~~~~------~~~------------------------~~~~~~~~~~l~~~~L~~~~~-- 131 (353)
T PRK10851 84 ALFRHMTVFDNIAFGLTVLPRRER------PNA------------------------AAIKAKVTQLLEMVQLAHLAD-- 131 (353)
T ss_pred ccCCCCcHHHHHHhhhhhcccccC------CCH------------------------HHHHHHHHHHHHHcCCchhhh--
Confidence 999999999999997643210000 000 012234677899999987665
Q ss_pred ccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
+++..|||||||||+||+|++ ++|||||+|||+.++.++.+.|+++.+.. +++++.++|+..++..++|+|
T Consensus 132 ---~~~~~LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tii~vTHd~~ea~~~~Dri 207 (353)
T PRK10851 132 ---RYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEEL-KFTSVFVTHDQEEAMEVADRV 207 (353)
T ss_pred ---CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEE
Confidence 455689999999999988774 99999999999999999999999987643 455666889999999999999
Q ss_pred EEecCCeEEEecChHHHH
Q 038815 404 ILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~~ 421 (1436)
++|++|++++.|+++++.
T Consensus 208 ~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 208 VVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999998874
No 88
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.1e-34 Score=336.20 Aligned_cols=200 Identities=27% Similarity=0.381 Sum_probs=172.3
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..+.++|++..+. ++.+|+|||+.|++||++||+||||||||||+++|+|... +.+|+|.++|.+
T Consensus 6 ~~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~ 70 (306)
T PRK13537 6 APIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEP 70 (306)
T ss_pred ceEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEe
Confidence 3577888876552 3579999999999999999999999999999999999865 457999999987
Q ss_pred ccc--ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 038815 945 KKQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTE 1022 (1436)
Q Consensus 945 ~~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1022 (1436)
... ...++.+|||+|+..+++.+||+|++.|.+.++. .+..+..++++++++.++|.+..++.+ ++||||
T Consensus 71 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (306)
T PRK13537 71 VPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGG 142 (306)
T ss_pred cccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHH
Confidence 543 2356789999999999999999999998776542 233444556889999999998888875 579999
Q ss_pred HHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1023 qrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+..|+
T Consensus 143 ~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~ 207 (306)
T PRK13537 143 MKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDR 207 (306)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999877999999999975 67777888
No 89
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.1e-34 Score=294.27 Aligned_cols=196 Identities=23% Similarity=0.364 Sum_probs=166.8
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 038815 183 DVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQHDNHIGEMTVRETLA 261 (1436)
Q Consensus 183 ~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 261 (1436)
.+++.|++||+++|+|||||||||||+.++|...|. +|+|.+||.++....| +|-++.++|+.++|..+||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 578899999999999999999999999999999997 9999999999877666 477999999999999999999998
Q ss_pred hhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccCCCCHHH
Q 038815 262 FSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIRGISGGQ 341 (1436)
Q Consensus 262 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~rgLSGGq 341 (1436)
++..- +-+ ++ .+.+..++.++...||..+.+. .+..|||||
T Consensus 94 LGl~P---~Lk------L~-------------------------a~~r~~v~~aa~~vGl~~~~~R-----LP~~LSGGq 134 (231)
T COG3840 94 LGLSP---GLK------LN-------------------------AEQREKVEAAAAQVGLAGFLKR-----LPGELSGGQ 134 (231)
T ss_pred ccCCc---ccc------cC-------------------------HHHHHHHHHHHHHhChhhHhhh-----CccccCchH
Confidence 86421 110 00 0122346778899999988764 455799999
Q ss_pred HHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEecC
Q 038815 342 KRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGLIVYLGP 416 (1436)
Q Consensus 342 rkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~iv~~G~ 416 (1436)
||||++||+++ ++||||+++||+.-+.++...+.+++.+.+.|+++ ++|+.+++..++|+++++++|||.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~Tllm-VTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLM-VTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEE-EeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 99999999985 99999999999999999999999998876555555 6677789999999999999999999999
Q ss_pred hHHHH
Q 038815 417 RELVL 421 (1436)
Q Consensus 417 ~~~~~ 421 (1436)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 98764
No 90
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.5e-34 Score=320.37 Aligned_cols=200 Identities=23% Similarity=0.304 Sum_probs=166.1
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++++|+++.++. +.+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 467788776531 12469999999999999999999999999999999999765 35799999998653
Q ss_pred c---c---cccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 038815 947 Q---E---TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLS 1020 (1436)
Q Consensus 947 ~---~---~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1020 (1436)
. . .+++.++|++|++.+++.+||+|++.+....+. ...++..+.++++++.++|.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 2 1 245679999999988899999999988754431 223344567889999999988777653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|++. ++.+..|+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~ 207 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHR 207 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999999777999999999975 45555666
No 91
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-34 Score=323.81 Aligned_cols=206 Identities=31% Similarity=0.390 Sum_probs=167.5
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC------ccceEEEEcC
Q 038815 173 TRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE------PQRVAAYISQ 246 (1436)
Q Consensus 173 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q 246 (1436)
.+++.+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|
T Consensus 8 ~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q 84 (235)
T cd03261 8 KSFGGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQ 84 (235)
T ss_pred EEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEcc
Confidence 3344567999999999999999999999999999999999999987 999999998875432 2456999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccc
Q 038815 247 HDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICAD 326 (1436)
Q Consensus 247 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 326 (1436)
++.+++.+||+||+.++.+.... ..+ .+....++.+++.+||++..+
T Consensus 85 ~~~~~~~~tv~~~l~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~~l~~~~~ 131 (235)
T cd03261 85 SGALFDSLTVFENVAFPLREHTR---------LSE------------------------EEIREIVLEKLEAVGLRGAED 131 (235)
T ss_pred CcccCCCCcHHHHHHHHHhhccC---------CCH------------------------HHHHHHHHHHHHHcCCchhhc
Confidence 99999999999999886432100 000 011223566789999977655
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
+. ++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|
T Consensus 132 ~~-----~~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~vsH~~~~~~~~~d 205 (235)
T cd03261 132 LY-----PAELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKEL-GLTSIMVTHDLDTAFAIAD 205 (235)
T ss_pred CC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhcC
Confidence 44 457999999999998766 599999999999999999999999986533 4455567888889999999
Q ss_pred eEEEecCCeEEEecChHHH
Q 038815 402 DIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 402 ~vilL~~G~iv~~G~~~~~ 420 (1436)
+|++|++|++++.|+.+++
T Consensus 206 ~v~~l~~G~i~~~g~~~~~ 224 (235)
T cd03261 206 RIAVLYDGKIVAEGTPEEL 224 (235)
T ss_pred EEEEEECCeEEEecCHHHH
Confidence 9999999999999988765
No 92
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-34 Score=324.15 Aligned_cols=187 Identities=26% Similarity=0.367 Sum_probs=159.7
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc------ccccceEEEeccCCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ------ETFTRISGYCEQNDIHSP 965 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~~~~ 965 (1436)
+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.+||++|++.+++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFD 90 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccChhhHHHHhcceEEEccCcccCC
Confidence 469999999999999999999999999999999999865 357999999986532 234567999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCC
Q 038815 966 LVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1045 (1436)
Q Consensus 966 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEP 1045 (1436)
.+||+|++.+...... ..+.++..+.++++++.++|.+..+..+ ..|||||||||+||++|+.+|++|+||||
T Consensus 91 ~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~llllDEP 163 (235)
T cd03261 91 SLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSGGMKKRVALARALALDPELLLYDEP 163 (235)
T ss_pred CCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 9999999988643221 1234444567889999999988776653 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1046 TSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1046 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|+|||+.++..+++.|++++++ |+|||+++|++. ++.+..|+
T Consensus 164 t~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~ 206 (235)
T cd03261 164 TAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADR 206 (235)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCE
Confidence 9999999999999999999874 899999999986 46677787
No 93
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=341.79 Aligned_cols=210 Identities=24% Similarity=0.338 Sum_probs=176.5
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCC
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQH 247 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~ 247 (1436)
+++.++.++..+|+|+|+.+++||+++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ ++.++||+|+
T Consensus 23 ~~v~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~ 99 (377)
T PRK11607 23 RNLTKSFDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQS 99 (377)
T ss_pred EeEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCC
Confidence 34455555567999999999999999999999999999999999999987 9999999998865443 4689999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
+.+||.+||.||+.|+.+.++.. + .+....++++++.+||.+..+
T Consensus 100 ~~lfp~ltv~eNi~~~l~~~~~~----------~------------------------~~~~~~v~~~l~~l~L~~~~~- 144 (377)
T PRK11607 100 YALFPHMTVEQNIAFGLKQDKLP----------K------------------------AEIASRVNEMLGLVHMQEFAK- 144 (377)
T ss_pred CccCCCCCHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhc-
Confidence 99999999999999976543210 0 012234677899999987655
Q ss_pred cccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
..+.+|||||||||+|||+++ |||||||++||..++.++.+.|+++.+..+ .+++.++|+..++..++|+
T Consensus 145 ----~~~~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~laDr 219 (377)
T PRK11607 145 ----RKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVG-VTCVMVTHDQEEAMTMAGR 219 (377)
T ss_pred ----CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCE
Confidence 456689999999999988774 999999999999999999999998866444 5556688999999999999
Q ss_pred EEEecCCeEEEecChHHHH
Q 038815 403 IILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~ 421 (1436)
|++|++|+++..|+++++.
T Consensus 220 i~vl~~G~i~~~g~~~~~~ 238 (377)
T PRK11607 220 IAIMNRGKFVQIGEPEEIY 238 (377)
T ss_pred EEEEeCCEEEEEcCHHHHH
Confidence 9999999999999998874
No 94
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-34 Score=301.26 Aligned_cols=209 Identities=31% Similarity=0.423 Sum_probs=174.3
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCcc---ceEEEEcCC
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQ---RVAAYISQH 247 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~ 247 (1436)
+..+...+.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|++++||.+++.+.+. +..+..+|+
T Consensus 7 ls~~~~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~ 83 (259)
T COG4559 7 LSYSLAGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQN 83 (259)
T ss_pred eEEEeecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccC
Confidence 334445677999999999999999999999999999999999999998 99999999999887664 556889999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
..+-...||+|-+.++..-.+.+.. | .+...+++..|...++.+.+.
T Consensus 84 s~laFpFtv~eVV~mGr~p~~~g~~-----------------~---------------~e~~~i~~~ala~~d~~~la~- 130 (259)
T COG4559 84 SSLAFPFTVQEVVQMGRIPHRSGRE-----------------P---------------EEDERIAAQALAATDLSGLAG- 130 (259)
T ss_pred cccccceEHHHHHHhcccccccCCC-----------------c---------------hhhHHHHHHHHHHcChhhhhc-
Confidence 8887778999999998654432211 0 012234566778888877654
Q ss_pred cccCcccCCCCHHHHHHHhhhhhh-----------hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPAL-----------ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPET 396 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~-----------vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~ 396 (1436)
+..+.|||||||||.+||.+ +||||||||.||......+++..|++++. + ..|+.+.|+.+-+
T Consensus 131 ----R~y~~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLA 204 (259)
T COG4559 131 ----RDYRTLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLA 204 (259)
T ss_pred ----cchhhcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHH
Confidence 34568999999999998766 38999999999999999999999999974 3 5566688999999
Q ss_pred HhhcCeEEEecCCeEEEecChHHHH
Q 038815 397 YDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 397 ~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
..++|+|++|++||++..|++++++
T Consensus 205 A~YaDrivll~~Grv~a~g~p~~vl 229 (259)
T COG4559 205 AQYADRIVLLHQGRVIASGSPQDVL 229 (259)
T ss_pred HHhhheeeeeeCCeEeecCCHHHhc
Confidence 9999999999999999999999875
No 95
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=341.02 Aligned_cols=209 Identities=26% Similarity=0.381 Sum_probs=173.7
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCCC
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQHD 248 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d 248 (1436)
++.++++++.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|+.
T Consensus 8 ~l~~~~~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~ 84 (369)
T PRK11000 8 NVTKAYGDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSY 84 (369)
T ss_pred EEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCc
Confidence 3444455567999999999999999999999999999999999999987 9999999998765433 46799999999
Q ss_pred CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccc
Q 038815 249 NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTL 328 (1436)
Q Consensus 249 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 328 (1436)
.+++.+||+||+.|+.+.++.. + .+....++.+++.+||++..+..
T Consensus 85 ~l~~~~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~lgL~~~~~~~ 130 (369)
T PRK11000 85 ALYPHLSVAENMSFGLKLAGAK----------K------------------------EEINQRVNQVAEVLQLAHLLDRK 130 (369)
T ss_pred ccCCCCCHHHHHHhHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhcCC
Confidence 9999999999999876433210 0 01122456789999998766544
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
+..|||||||||+||+++ +|+|||||+|||+.++.++.+.|+++.+..+ ++++.++|+..++.+++|+|
T Consensus 131 -----~~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tvI~vTHd~~~~~~~~d~i 204 (369)
T PRK11000 131 -----PKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLG-RTMIYVTHDQVEAMTLADKI 204 (369)
T ss_pred -----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhC-CEEEEEeCCHHHHHHhCCEE
Confidence 457999999999998877 4999999999999999999999999865434 45556788889999999999
Q ss_pred EEecCCeEEEecChHHHH
Q 038815 404 ILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~~ 421 (1436)
++|++|+++..|+++++.
T Consensus 205 ~vl~~G~i~~~g~~~~i~ 222 (369)
T PRK11000 205 VVLDAGRVAQVGKPLELY 222 (369)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999998874
No 96
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=339.23 Aligned_cols=199 Identities=26% Similarity=0.380 Sum_probs=172.0
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|++..++ +++.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 66778776542 13469999999999999999999999999999999999866 45899999998764
Q ss_pred c-ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 038815 947 Q-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 1025 (1436)
Q Consensus 947 ~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1025 (1436)
. ...+|.+|||+|+..++|++||+||+.|..+.+ ..+..+..+.++++++.++|.+..+..+ +.|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHH
Confidence 3 223578999999999999999999999986543 2345556678999999999998888763 579999999
Q ss_pred HHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1026 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1026 Rl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|+++|++ .++.++.|+
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~-~ea~~l~D~ 204 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQ-VEAMTLADR 204 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCE
Confidence 999999999999999999999999999999999999998775 99999999997 468888898
No 97
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.4e-34 Score=333.79 Aligned_cols=203 Identities=28% Similarity=0.354 Sum_probs=170.3
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC--ccceEEEEcCCCCCCCC
Q 038815 176 KHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE--PQRVAAYISQHDNHIGE 253 (1436)
Q Consensus 176 ~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~ 253 (1436)
+++++|+|+|+.|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 4 ~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 80 (302)
T TIGR01188 4 GDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDED 80 (302)
T ss_pred CCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCC
Confidence 3456999999999999999999999999999999999999987 999999998875421 24569999999999999
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM 333 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 333 (1436)
+||+||+.+.++.++... .+....++.+++.+||++..++.+
T Consensus 81 ~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 122 (302)
T TIGR01188 81 LTGRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPV---- 122 (302)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCch----
Confidence 999999998765442110 001223567899999987776654
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
+.|||||||||+||+|+ +|+|||||+|||+.++..+.+.|+++.+ . +++|+.++|..+++.++||+|++|++
T Consensus 123 -~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~ 199 (302)
T TIGR01188 123 -GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDH 199 (302)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 46999999999998777 4999999999999999999999999864 3 45566678889999999999999999
Q ss_pred CeEEEecChHHHHH
Q 038815 409 GLIVYLGPRELVLD 422 (1436)
Q Consensus 409 G~iv~~G~~~~~~~ 422 (1436)
|++++.|+.+++.+
T Consensus 200 G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 200 GRIIAEGTPEELKR 213 (302)
T ss_pred CEEEEECCHHHHHH
Confidence 99999999988754
No 98
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=5.3e-34 Score=337.77 Aligned_cols=199 Identities=25% Similarity=0.363 Sum_probs=173.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|++..+. .+.+|+|+|+.+++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 367788876553 3569999999999999999999999999999999999876 4589999999876
Q ss_pred cc-ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 038815 946 KQ-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQR 1024 (1436)
Q Consensus 946 ~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1024 (1436)
.. ...+|.+|||+|+..++|++||+||+.|....+ ..+..+..+.++++++.++|.++.+.. +..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~-----~~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKY-----PGQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCC-----hhhCCHHHH
Confidence 42 234678999999999999999999999986543 234556677899999999999988876 467999999
Q ss_pred HHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1025 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1025 kRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||+|+.+|++|+|||||||||..++..+.+.|+++.++ |.|+|+++|++. +++++.|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~ 204 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADR 204 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998765 999999999985 78888998
No 99
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=6.5e-34 Score=334.59 Aligned_cols=202 Identities=24% Similarity=0.293 Sum_probs=170.8
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++++|++..+... .+...+|+|||+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 5678887665311 012469999999999999999999999999999999999876 45799999998754
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 038815 947 QE------TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLS 1020 (1436)
Q Consensus 947 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1020 (1436)
.. ..++.+||++|+..+++..||+||+.|....+ ..+.++..+++.++++.+||.+..|.. ++.||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~-----~~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSY-----PSNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 21 23568999999999999999999999875433 234455667789999999999888876 46799
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||||+|||||+.+|++|+|||||||||+.++..+++.|+++.++ |.|||+++|++. .+.+..|+
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~ 210 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDC 210 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999999875 999999999974 56677888
No 100
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-34 Score=336.35 Aligned_cols=199 Identities=24% Similarity=0.350 Sum_probs=173.6
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|++..+. ++.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 577888877652 3569999999999999999999999999999999999876 4579999999876
Q ss_pred ccc-cccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 038815 946 KQE-TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQR 1024 (1436)
Q Consensus 946 ~~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1024 (1436)
... ..+|.+|||+|+..++|++||+||+.|....+. .+.++++++++++++.++|.++.+.. +..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~-----~~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRY-----VDQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 432 235789999999999999999999999865442 34556677899999999999888776 467999999
Q ss_pred HHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1025 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1025 kRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||+|+.+|++|+|||||||||+.++..+.+.|+++.++ |.|+|+++|++. +++++-|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~ 206 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDT 206 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998765 899999999985 68888898
No 101
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=7.2e-34 Score=334.95 Aligned_cols=211 Identities=27% Similarity=0.352 Sum_probs=176.0
Q ss_pred ccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC--ccceEEEEc
Q 038815 168 LQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE--PQRVAAYIS 245 (1436)
Q Consensus 168 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~ 245 (1436)
++++.++++++.+|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++
T Consensus 44 i~nl~k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~ 120 (340)
T PRK13536 44 LAGVSKSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVP 120 (340)
T ss_pred EEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEe
Confidence 445666666778999999999999999999999999999999999999998 999999999875432 246799999
Q ss_pred CCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccc
Q 038815 246 QHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICA 325 (1436)
Q Consensus 246 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 325 (1436)
|++.+++.+||+||+.+....++.. .. +....++.+++.+||++..
T Consensus 121 q~~~~~~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~ll~~~~L~~~~ 166 (340)
T PRK13536 121 QFDNLDLEFTVRENLLVFGRYFGMS----------TR------------------------EIEAVIPSLLEFARLESKA 166 (340)
T ss_pred CCccCCCCCcHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCchhh
Confidence 9999999999999999755443210 00 0112345678899998877
Q ss_pred cccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 038815 326 DTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLF 400 (1436)
Q Consensus 326 ~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lf 400 (1436)
++.++ .|||||||||+||+++ +++|||||+|||+.++.++.+.|+++.. . +++|+.++|..+++.++|
T Consensus 167 ~~~~~-----~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~ 239 (340)
T PRK13536 167 DARVS-----DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLC 239 (340)
T ss_pred CCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhC
Confidence 76654 6999999999998766 5999999999999999999999999865 3 455666788999999999
Q ss_pred CeEEEecCCeEEEecChHHHHH
Q 038815 401 DDIILLSDGLIVYLGPRELVLD 422 (1436)
Q Consensus 401 D~vilL~~G~iv~~G~~~~~~~ 422 (1436)
|+|++|++|+++++|+.+++..
T Consensus 240 d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 240 DRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred CEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999998754
No 102
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-34 Score=309.07 Aligned_cols=223 Identities=30% Similarity=0.394 Sum_probs=187.0
Q ss_pred ccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCcc----ceEEE
Q 038815 168 LQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQ----RVAAY 243 (1436)
Q Consensus 168 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~y 243 (1436)
.+.+.++.+...+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ .-++-
T Consensus 7 v~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~R 83 (250)
T COG0411 7 VRGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIAR 83 (250)
T ss_pred eccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhcccee
Confidence 345677888899999999999999999999999999999999999999998 99999999999887764 34678
Q ss_pred EcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc
Q 038815 244 ISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI 323 (1436)
Q Consensus 244 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 323 (1436)
-+|...+|++|||.||+..++..+.. +.. -+.. +. ...+..+.......+|+.+||.+
T Consensus 84 TFQ~~rlF~~lTVlENv~va~~~~~~---~~~--~l~~--------~~---------~~~~e~~~~e~A~~~Le~vgL~~ 141 (250)
T COG0411 84 TFQITRLFPGLTVLENVAVGAHARLG---LSG--LLGR--------PR---------ARKEEREARERARELLEFVGLGE 141 (250)
T ss_pred ecccccccCCCcHHHHHHHHhhhhhh---hhh--hhcc--------cc---------chhhHHHHHHHHHHHHHHcCCch
Confidence 89999999999999999998765421 000 0000 00 00011233445678999999999
Q ss_pred cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 038815 324 CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 398 (1436)
Q Consensus 324 ~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 398 (1436)
.+|+..|+ ||+|||||+.||+|+ +|+||||.+||.+..+.++.+.++++.+. ++.+|+.+-|+..-+.+
T Consensus 142 ~a~~~A~~-----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~-~g~tillIEHdM~~Vm~ 215 (250)
T COG0411 142 LADRPAGN-----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDR-GGVTILLIEHDMKLVMG 215 (250)
T ss_pred hhcchhhc-----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhc-CCcEEEEEEeccHHHhh
Confidence 99988775 999999999998776 59999999999999999999999998763 55777779999999999
Q ss_pred hcCeEEEecCCeEEEecChHHHH
Q 038815 399 LFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 399 lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+||+|+||+.|+++..|+++++.
T Consensus 216 l~dri~Vl~~G~~IAeG~P~eV~ 238 (250)
T COG0411 216 LADRIVVLNYGEVIAEGTPEEVR 238 (250)
T ss_pred hccEEEeccCCcCcccCCHHHHh
Confidence 99999999999999999999985
No 103
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-34 Score=317.43 Aligned_cols=202 Identities=29% Similarity=0.406 Sum_probs=173.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCC----CCCccceEEEEcCCC-CCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMD----EFEPQRVAAYISQHD-NHIG 252 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 252 (1436)
..+|+|+|+.|++|+.++|+||||||||||+++|+|.+.|. +|+|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 58999999999999999999999999999999999999998 899999999865 233468899999996 4567
Q ss_pred CCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCc
Q 038815 253 EMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDE 332 (1436)
Q Consensus 253 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 332 (1436)
.-||.|.++|+....+... ++...+++.+++.+||.+..+ +
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~-----r 134 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLD-----R 134 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhcc-----C
Confidence 7899999999987765421 123456788999999998765 5
Q ss_pred ccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
.+..|||||||||+||.++ +|+|||||+|||+..+.++++.++++.+. ++.++|.++|+.+.+.+++|++++|+
T Consensus 135 ~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 135 PPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred CccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 5678999999999997554 69999999999999999999999998764 44556668999999999999999999
Q ss_pred CCeEEEecChHHHHH
Q 038815 408 DGLIVYLGPRELVLD 422 (1436)
Q Consensus 408 ~G~iv~~G~~~~~~~ 422 (1436)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877643
No 104
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=7.5e-34 Score=316.97 Aligned_cols=185 Identities=31% Similarity=0.415 Sum_probs=157.3
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc-------cccceEEEeccCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE-------TFTRISGYCEQNDIHS 964 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~-------~~~~~~gyv~Q~d~~~ 964 (1436)
+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.++
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLL 94 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccC
Confidence 569999999999999999999999999999999999865 3579999999865321 1245799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecC
Q 038815 965 PLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1044 (1436)
Q Consensus 965 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDE 1044 (1436)
+.+||+|++.+....+. ....+..+.++++++.+||.+..+..+ +.||||||||++||++|+.+|++|+|||
T Consensus 95 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDE 166 (218)
T cd03255 95 PDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELSGGQQQRVAIARALANDPKIILADE 166 (218)
T ss_pred CCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcCHHHHHHHHHHHHHccCCCEEEEcC
Confidence 99999999998765432 223334557889999999988776653 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1045 PTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1045 PTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||+|||+.++..+.+.|+++++ .|+|||+++|++.. + +..|+
T Consensus 167 P~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~ 209 (218)
T cd03255 167 PTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADR 209 (218)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcE
Confidence 9999999999999999999987 58999999999864 3 36666
No 105
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-34 Score=315.43 Aligned_cols=186 Identities=30% Similarity=0.393 Sum_probs=157.7
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc-ccccceEEEeccCCCCCCCCCHH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ-ETFTRISGYCEQNDIHSPLVTVY 970 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~ 970 (1436)
+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++.+||+
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 90 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVA 90 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHH
Confidence 569999999999999999999999999999999999765 357999999986532 22346799999998888899999
Q ss_pred HHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCC
Q 038815 971 ESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1050 (1436)
Q Consensus 971 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD 1050 (1436)
|++.+...... ...+...+.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 ~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD 162 (213)
T cd03259 91 ENIAFGLKLRG---VPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQRVALARALAREPSLLLLDEPLSALD 162 (213)
T ss_pred HHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99987654321 223344556889999999988777653 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1051 ARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1051 ~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+.++..+++.|+++++ .|+|||+++|++. ++.+..|+
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 200 (213)
T cd03259 163 AKLREELREELKELQRELGITTIYVTHDQE-EALALADR 200 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCE
Confidence 9999999999999976 4899999999975 45566676
No 106
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.3e-33 Score=316.72 Aligned_cols=208 Identities=37% Similarity=0.591 Sum_probs=171.1
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-CeeEEEEEEcCeec
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGSITISGYLK 945 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~-~~~~G~i~i~g~~~ 945 (1436)
+.|+|+.+..+... ..+.+|+|+|+.+++||+++|+||||||||||+++|+|.... .+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~~---------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNWN---------KYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecCc---------cccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 45777777653210 135799999999999999999999999999999999997641 23589999999876
Q ss_pred ccccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHH-HHHHcCCCcccccccCCCCCCCCCHHHH
Q 038815 946 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEE-IMELVELNPLRQSLVGLPGVSGLSTEQR 1024 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~-~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1024 (1436)
.....++.++|++|++.+++.+||+||+.|.+....+.....+.....+++ .++.+++.+..++. ++.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 544566789999999999999999999998765443222222223334555 89999998776655 457999999
Q ss_pred HHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1025 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1025 kRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+.|.|||+++|++..++.+.+|+
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~ 213 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDR 213 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCE
Confidence 9999999999999999999999999999999999999998877899999999998889999998
No 107
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1e-33 Score=335.68 Aligned_cols=199 Identities=25% Similarity=0.338 Sum_probs=172.1
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeE--EEEEEcCe
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT--GSITISGY 943 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~--G~i~i~g~ 943 (1436)
.+.++|+++.+. ++.+|+|+|+.+++||+++|+|||||||||||++|+|..++ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 467788877653 34699999999999999999999999999999999998663 46 99999998
Q ss_pred eccc-ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 038815 944 LKKQ-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTE 1022 (1436)
Q Consensus 944 ~~~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1022 (1436)
+... ...+|.+|||+|+..++|++||+||+.|....+ ..+.++.+++++++++.++|.+..+..+ +.||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 7542 224578999999999999999999999986543 2345556678999999999999888774 679999
Q ss_pred HHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc--CCEEEEEecCCCHHHHHHhhh
Q 038815 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET--GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1023 qrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++..+.|+
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dr 208 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADK 208 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999876 799999999975 57888888
No 108
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-33 Score=313.68 Aligned_cols=185 Identities=25% Similarity=0.385 Sum_probs=158.5
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccccccceEEEeccCCCCCCCCCHHH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQETFTRISGYCEQNDIHSPLVTVYE 971 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 971 (1436)
+.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ..++.++|++|+..+++.+||+|
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e 89 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVID 89 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHH
Confidence 569999999999999999999999999999999999765 358999999976543 34567999999998888999999
Q ss_pred HHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCH
Q 038815 972 SLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1051 (1436)
Q Consensus 972 ~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~ 1051 (1436)
++.+....+. ....+..+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 90 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~ 161 (210)
T cd03269 90 QLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKR-----VEELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDP 161 (210)
T ss_pred HHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCc-----HhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 9988655432 22334456788999999998777665 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1052 RAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1052 ~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.++..+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 162 ~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~ 197 (210)
T cd03269 162 VNVELLKDVIRELARAGKTVILSTHQME-LVEELCDR 197 (210)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhE
Confidence 9999999999998877899999999975 35555666
No 109
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-34 Score=299.04 Aligned_cols=186 Identities=30% Similarity=0.345 Sum_probs=168.3
Q ss_pred EEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc--cccccceEEEeccCCCCCCCCCHH
Q 038815 893 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK--QETFTRISGYCEQNDIHSPLVTVY 970 (1436)
Q Consensus 893 ~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~--~~~~~~~~gyv~Q~d~~~~~lTv~ 970 (1436)
++++||||.++.||++||+|+|||||||+|++|++... +.+|.|.++|.+.. +...++.+|.++.+--++..+|++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 48999999999999999999999999999999999876 45799999998753 345788999999888888999999
Q ss_pred HHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCC
Q 038815 971 ESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1050 (1436)
Q Consensus 971 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD 1050 (1436)
|||.|.+.|.. ....+.+++.+++.+.|+|.++.|+.+| ++|.|+||||.|||||+++|+++++||||||||
T Consensus 94 Enl~~Fa~L~~---l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLNG---LSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHhh---hhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 99999998863 4566677889999999999999999975 699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhh
Q 038815 1051 ARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1051 ~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
..+...+.+.++++.+.|++||+++|..+ |+=++.|+.
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrv 203 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRV 203 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheE
Confidence 99999999999999888999999999864 677788983
No 110
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-33 Score=314.63 Aligned_cols=184 Identities=28% Similarity=0.389 Sum_probs=157.7
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccccccceEEEeccCCCCCCCCCHHH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQETFTRISGYCEQNDIHSPLVTVYE 971 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 971 (1436)
+.+|+|+|+.+++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+.. ..++.++|++|+..+++.+||+|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVT--GPGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECc--cccCcEEEEecccccccCCCHHH
Confidence 579999999999999999999999999999999999865 35799999998654 24567999999998888899999
Q ss_pred HHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCH
Q 038815 972 SLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1051 (1436)
Q Consensus 972 ~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~ 1051 (1436)
++.+....+. ...+...+.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9988754432 223344567889999999988777653 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1052 RAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1052 ~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.++..+++.|+++.+ .|+|||+++|++. ++.+..|+
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 201 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADR 201 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999865 4899999999985 45566676
No 111
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-33 Score=315.10 Aligned_cols=207 Identities=30% Similarity=0.378 Sum_probs=168.2
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC--ccceEEEEcCCC
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE--PQRVAAYISQHD 248 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d 248 (1436)
+..++.++++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++
T Consensus 6 ~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~ 82 (220)
T cd03265 6 LVKKYGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDL 82 (220)
T ss_pred EEEEECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCc
Confidence 333444567999999999999999999999999999999999999887 999999998764321 235689999999
Q ss_pred CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccc
Q 038815 249 NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTL 328 (1436)
Q Consensus 249 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 328 (1436)
.+++.+||+||+.+..+..+.. . .+....++.+++.+||++..++.
T Consensus 83 ~~~~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~ 128 (220)
T cd03265 83 SVDDELTGWENLYIHARLYGVP----------G------------------------AERRERIDELLDFVGLLEAADRL 128 (220)
T ss_pred cccccCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHHHhhCC
Confidence 9999999999999865432110 0 00122356789999998766654
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.+++|+|
T Consensus 129 -----~~~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~tH~~~~~~~~~d~i 202 (220)
T cd03265 129 -----VKTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEF-GMTILLTTHYMEEAEQLCDRV 202 (220)
T ss_pred -----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEE
Confidence 457999999999998766 499999999999999999999999986532 445666888889999999999
Q ss_pred EEecCCeEEEecChHHH
Q 038815 404 ILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~ 420 (1436)
++|++|++++.|+++++
T Consensus 203 ~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 203 AIIDHGRIIAEGTPEEL 219 (220)
T ss_pred EEEeCCEEEEeCChHHc
Confidence 99999999999987653
No 112
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-33 Score=313.37 Aligned_cols=200 Identities=30% Similarity=0.442 Sum_probs=162.6
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCCCCCC
Q 038815 173 TRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQHDNHI 251 (1436)
Q Consensus 173 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~ 251 (1436)
.+++++++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 8 ~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~ 84 (213)
T cd03259 8 KTYGSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALF 84 (213)
T ss_pred EEeCCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhc
Confidence 3344467999999999999999999999999999999999999887 9999999998754332 35799999999899
Q ss_pred CCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccC
Q 038815 252 GEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGD 331 (1436)
Q Consensus 252 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 331 (1436)
+.+||+||+.++....+.. .. +....++.+++.+||++..+..
T Consensus 85 ~~~tv~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~--- 127 (213)
T cd03259 85 PHLTVAENIAFGLKLRGVP----------KA------------------------EIRARVRELLELVGLEGLLNRY--- 127 (213)
T ss_pred cCCcHHHHHHhHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhcC---
Confidence 9999999998864322100 00 0112345678899998766544
Q ss_pred cccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 038815 332 EMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILL 406 (1436)
Q Consensus 332 ~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL 406 (1436)
+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|
T Consensus 128 --~~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l 204 (213)
T cd03259 128 --PHELSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQREL-GITTIYVTHDQEEALALADRIAVM 204 (213)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhcCEEEEE
Confidence 457999999999998766 599999999999999999999999986533 445566788888999999999999
Q ss_pred cCCeEEEec
Q 038815 407 SDGLIVYLG 415 (1436)
Q Consensus 407 ~~G~iv~~G 415 (1436)
++|++++.|
T Consensus 205 ~~G~i~~~g 213 (213)
T cd03259 205 NEGRIVQVG 213 (213)
T ss_pred ECCEEEecC
Confidence 999998765
No 113
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=8.5e-34 Score=331.36 Aligned_cols=187 Identities=28% Similarity=0.376 Sum_probs=162.7
Q ss_pred ceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc--ccccceEEEeccCCCCCCCCC
Q 038815 891 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ--ETFTRISGYCEQNDIHSPLVT 968 (1436)
Q Consensus 891 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lT 968 (1436)
++.+|+|||+.|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 4579999999999999999999999999999999999865 357999999986532 234567999999999999999
Q ss_pred HHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCC
Q 038815 969 VYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1048 (1436)
Q Consensus 969 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsg 1048 (1436)
|+|++.+.+.++. .+..+..+.++++++.++|.+..+..+ +.|||||||||+||++|+.+|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998766542 233344557899999999998877764 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1049 LDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1049 LD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||+.++..+++.|++++++|+|||+++|++. ++.+..|+
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~ 193 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDR 193 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 9999999999999999878999999999975 67777887
No 114
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.6e-33 Score=313.41 Aligned_cols=199 Identities=27% Similarity=0.317 Sum_probs=165.0
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++++|+++.++ +++.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 45677776542 12469999999999999999999999999999999999865 35799999998653
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 038815 947 QE------TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLS 1020 (1436)
Q Consensus 947 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1020 (1436)
.. .+++.++|++|+..+++.+||+|++.+....+. ...+...+.++++++.++|.+..+.. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAF-----PEQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCC
Confidence 21 245679999999988889999999988754331 22334456788999999998766665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~ 206 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHR 206 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCE
Confidence 99999999999999999999999999999999999999999998777999999999975 45555676
No 115
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-33 Score=332.81 Aligned_cols=202 Identities=27% Similarity=0.374 Sum_probs=169.2
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc------cceEEEEcCCCCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP------QRVAAYISQHDNH 250 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~ 250 (1436)
.+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 17 ~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l 93 (343)
T PRK11153 17 TIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNL 93 (343)
T ss_pred ceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCcc
Confidence 457999999999999999999999999999999999999987 9999999998765432 3579999999999
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVG 330 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 330 (1436)
++.+||+||+.+.....+.. +. +....++.+++.+||++..++.
T Consensus 94 ~~~~tv~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~-- 137 (343)
T PRK11153 94 LSSRTVFDNVALPLELAGTP----------KA------------------------EIKARVTELLELVGLSDKADRY-- 137 (343)
T ss_pred CCCCcHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhCC--
Confidence 99999999999875433210 00 0122356789999998766544
Q ss_pred CcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 038815 331 DEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 405 (1436)
Q Consensus 331 ~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vil 405 (1436)
++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.++||+|++
T Consensus 138 ---~~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiilvtH~~~~i~~~~d~v~~ 213 (343)
T PRK11153 138 ---PAQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINREL-GLTIVLITHEMDVVKRICDRVAV 213 (343)
T ss_pred ---hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEE
Confidence 457999999999998776 599999999999999999999999986543 45556678888999999999999
Q ss_pred ecCCeEEEecChHHHH
Q 038815 406 LSDGLIVYLGPRELVL 421 (1436)
Q Consensus 406 L~~G~iv~~G~~~~~~ 421 (1436)
|++|++++.|+.+++.
T Consensus 214 l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 214 IDAGRLVEQGTVSEVF 229 (343)
T ss_pred EECCEEEEEcCHHHHH
Confidence 9999999999988764
No 116
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2e-33 Score=328.39 Aligned_cols=210 Identities=28% Similarity=0.359 Sum_probs=171.7
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC--ccceEEEEcC
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE--PQRVAAYISQ 246 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q 246 (1436)
+++.+++++.++|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|
T Consensus 8 ~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q 84 (303)
T TIGR01288 8 VGVSKSYGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQ 84 (303)
T ss_pred EeEEEEeCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEec
Confidence 34445555667999999999999999999999999999999999999887 999999998874322 2467999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccc
Q 038815 247 HDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICAD 326 (1436)
Q Consensus 247 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 326 (1436)
++.+++.+||+||+.+.....+.. .. +....++.+++.+||++..+
T Consensus 85 ~~~~~~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~ll~~~~l~~~~~ 130 (303)
T TIGR01288 85 FDNLDPEFTVRENLLVFGRYFGMS----------TR------------------------EIEAVIPSLLEFARLESKAD 130 (303)
T ss_pred cccCCcCCcHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHCCChhHhc
Confidence 999999999999998754332110 00 01122456788999988776
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
+.+ +.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++ . +++|+.++|+.+++.++||
T Consensus 131 ~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~til~~sH~~~~~~~~~d 203 (303)
T TIGR01288 131 VRV-----ALLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCD 203 (303)
T ss_pred Cch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCC
Confidence 655 46999999999998766 5999999999999999999999999865 3 4556668888899999999
Q ss_pred eEEEecCCeEEEecChHHHHH
Q 038815 402 DIILLSDGLIVYLGPRELVLD 422 (1436)
Q Consensus 402 ~vilL~~G~iv~~G~~~~~~~ 422 (1436)
+|++|++|++++.|+.+++..
T Consensus 204 ~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 204 RLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred EEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999988753
No 117
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.3e-33 Score=311.89 Aligned_cols=186 Identities=27% Similarity=0.384 Sum_probs=157.7
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc-ccccceEEEeccCCCCCCCCCHH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ-ETFTRISGYCEQNDIHSPLVTVY 970 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~ 970 (1436)
+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++..||+
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 469999999999999999999999999999999999865 357999999986532 12345799999999888889999
Q ss_pred HHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCC
Q 038815 971 ESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1050 (1436)
Q Consensus 971 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD 1050 (1436)
|++.+....+. ...++..+.++++++.+++.+..+..+ +.||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 ~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~laral~~~p~llllDEPt~~LD 162 (213)
T cd03301 91 DNIAFGLKLRK---VPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLD 162 (213)
T ss_pred HHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99988654331 233444557889999999988777663 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1051 ARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1051 ~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+.++..+++.|++++++ |+|||+++|++. ++.+..|+
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~ 200 (213)
T cd03301 163 AKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADR 200 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCe
Confidence 99999999999999864 899999999974 45556676
No 118
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.2e-33 Score=334.02 Aligned_cols=199 Identities=23% Similarity=0.319 Sum_probs=172.8
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+. .+.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478888887653 3569999999999999999999999999999999999876 3579999999875
Q ss_pred cc-ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 038815 946 KQ-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQR 1024 (1436)
Q Consensus 946 ~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1024 (1436)
.. ...+|.+|||+|+..++|++||+||+.|+...+ ..+..+..+.++++++.++|.+..+.. +..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----p~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRK-----PHQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 42 224578999999999999999999999976543 234455566789999999999988876 367999999
Q ss_pred HHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1025 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1025 kRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||+|+.+|++|+|||||||||..++..+.+.|+++.++ |.|+|+++|++. +++++.|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDr 214 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDR 214 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999875 999999999974 68888898
No 119
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.2e-33 Score=317.04 Aligned_cols=189 Identities=29% Similarity=0.372 Sum_probs=158.9
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc---c-ccceEEEeccCCCCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE---T-FTRISGYCEQNDIHSPLV 967 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~d~~~~~l 967 (1436)
+.+|+|+|+++++||++||+|||||||||||++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~ 90 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPEL 90 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCCCCHHHHHhcCEEEEecccccccCC
Confidence 469999999999999999999999999999999999865 3579999999865431 1 234699999999999999
Q ss_pred CHHHHHHHhhhhcCCCC-------CCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 038815 968 TVYESLLYSAWLRLPPE-------VDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1040 (1436)
Q Consensus 968 Tv~E~l~f~a~lr~~~~-------~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il 1040 (1436)
||+|++.+....+.... ....+..+.++++++.++|.+..+.. ++.|||||||||+||++|+.+|++|
T Consensus 91 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~ll 165 (236)
T cd03219 91 TVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRP-----AGELSYGQQRRLEIARALATDPKLL 165 (236)
T ss_pred CHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999988654321110 11234455788999999998776665 3579999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1041 FMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1041 ~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+|||||+|||..++..+++.|+++++.|+|||+++|++. ++.+..|+
T Consensus 166 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~ 212 (236)
T cd03219 166 LLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADR 212 (236)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999999999999878999999999986 56677787
No 120
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2e-34 Score=297.02 Aligned_cols=210 Identities=24% Similarity=0.364 Sum_probs=179.8
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCcc----ceEEEEc
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQ----RVAAYIS 245 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~ 245 (1436)
++.++++++++++|||+.|++||+++++|||||||||...++.|+..|+ +|+|.++|.+++..... .-++|+|
T Consensus 9 ~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLp 85 (243)
T COG1137 9 NLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLP 85 (243)
T ss_pred hhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCccccc
Confidence 4567778889999999999999999999999999999999999999998 99999999999877653 3579999
Q ss_pred CCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccc
Q 038815 246 QHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICA 325 (1436)
Q Consensus 246 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 325 (1436)
|++..|..|||+|||.-..+.+.... ...+.+...+.+|+.|+|.|++
T Consensus 86 QE~SIFr~LtV~dNi~~vlE~~~~d~--------------------------------~~~~~~~~l~~LL~ef~i~hlr 133 (243)
T COG1137 86 QEASIFRKLTVEDNIMAVLEIREKDL--------------------------------KKAERKEELDALLEEFHITHLR 133 (243)
T ss_pred ccchHhhcCcHHHHHHHHHhhhhcch--------------------------------hHHHHHHHHHHHHHHhchHHHh
Confidence 99999999999999987665432100 0012234467899999999988
Q ss_pred cccccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 038815 326 DTLVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLF 400 (1436)
Q Consensus 326 ~t~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lf 400 (1436)
+.. .-.||||||+|+.||||+. ++||||++|.||-+..+|-+.++.+.+ ++.-|+.+-|+-.|+.+.+
T Consensus 134 ~~~-----a~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~ 206 (243)
T COG1137 134 DSK-----AYSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDIC 206 (243)
T ss_pred cCc-----ccccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhh
Confidence 865 3469999999999999885 999999999999999999999999865 3455555789999999999
Q ss_pred CeEEEecCCeEEEecChHHHH
Q 038815 401 DDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 401 D~vilL~~G~iv~~G~~~~~~ 421 (1436)
||.+++++|++..+|+++++.
T Consensus 207 dRaYIi~~G~vla~G~p~ei~ 227 (243)
T COG1137 207 DRAYIISDGKVLAEGSPEEIV 227 (243)
T ss_pred heEEEEecCeEEecCCHHHHh
Confidence 999999999999999999875
No 121
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.4e-33 Score=311.93 Aligned_cols=186 Identities=26% Similarity=0.360 Sum_probs=157.8
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc------ccccceEEEeccCCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ------ETFTRISGYCEQNDIHSP 965 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~~~~ 965 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 469999999999999999999999999999999999865 357999999986532 124567999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCC
Q 038815 966 LVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1045 (1436)
Q Consensus 966 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEP 1045 (1436)
.+|++|++.+....+. ...++..+.++++++.++|.+..+.. +..||||||||++||++|+.+|++++||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRAL-----PAELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988654432 23344456788999999998877765 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1046 TSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1046 TsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|+|||+.+...+.+.|++++++|+|||+++|++. ++-+..|+
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~ 205 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHR 205 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999777999999999974 34445565
No 122
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-33 Score=313.34 Aligned_cols=186 Identities=31% Similarity=0.385 Sum_probs=158.7
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc--ccccceEEEeccCCCCCCCCCH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ--ETFTRISGYCEQNDIHSPLVTV 969 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 969 (1436)
+.+|+|+|+.+++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTG 90 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCcChHHHhhcEEEecCCccccccCcH
Confidence 569999999999999999999999999999999999865 357999999976532 2345679999999989999999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCC
Q 038815 970 YESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1049 (1436)
Q Consensus 970 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgL 1049 (1436)
+|++.+....+. .+.++..+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 91 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~la~al~~~p~llllDEPt~~L 162 (220)
T cd03265 91 WENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGL 162 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCC
Confidence 999988755432 223334556889999999988777663 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1050 DARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1050 D~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|+.++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~ 201 (220)
T cd03265 163 DPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDR 201 (220)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999876 899999999975 45566676
No 123
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2e-33 Score=313.54 Aligned_cols=202 Identities=27% Similarity=0.382 Sum_probs=166.9
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.++.. .....+|+|+|+.+++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 4567777655310 011269999999999999999999999999999999999865 35799999998754
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 038815 947 Q--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQR 1024 (1436)
Q Consensus 947 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1024 (1436)
. ..+++.+||++|++.+++.+||+|++.+....+. ...++..+.++++++.++|.+..+.. ++.||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRR-----VGGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhh-----hhhcCHHHH
Confidence 2 2345679999999988898999999987654431 23344556788999999998877765 357999999
Q ss_pred HHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1025 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1025 kRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~ 205 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDR 205 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCE
Confidence 9999999999999999999999999999999999999999777999999999975 55666676
No 124
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-33 Score=299.74 Aligned_cols=209 Identities=25% Similarity=0.378 Sum_probs=170.8
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCcc----ceEEEE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQ----RVAAYI 244 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv 244 (1436)
+++...+.+.++|+|||+++++||+++|+||||+|||||||+|+|..++. +|+|.++|.|++...+. .-++||
T Consensus 7 ~~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~V 83 (237)
T COG0410 7 ENLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYV 83 (237)
T ss_pred EeEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeC
Confidence 34556677889999999999999999999999999999999999999987 99999999999887664 568999
Q ss_pred cCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcC-Ccc
Q 038815 245 SQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLG-LDI 323 (1436)
Q Consensus 245 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~ 323 (1436)
||....||.|||+|||..++..+... +.. .. ..|.+.+.|- |..
T Consensus 84 PegR~iF~~LTVeENL~~g~~~~~~~------------~~~-----~~------------------~~e~v~~lFP~Lke 128 (237)
T COG0410 84 PEGRRIFPRLTVEENLLLGAYARRDK------------EAQ-----ER------------------DLEEVYELFPRLKE 128 (237)
T ss_pred cccccchhhCcHHHHHhhhhhccccc------------ccc-----cc------------------cHHHHHHHChhHHH
Confidence 99999999999999999875433110 000 00 0222333332 233
Q ss_pred cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 038815 324 CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 398 (1436)
Q Consensus 324 ~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 398 (1436)
-.+..-| .|||||||-++||||+ +|+|||||.||-|.-..+|.+.++++.+. .+.+|+.+.|....+.+
T Consensus 129 r~~~~aG-----~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~ 202 (237)
T COG0410 129 RRNQRAG-----TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALE 202 (237)
T ss_pred HhcCccc-----CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHH
Confidence 3344444 5999999999998777 49999999999999999999999998764 35677779999999999
Q ss_pred hcCeEEEecCCeEEEecChHHHH
Q 038815 399 LFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 399 lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
++|+.++|.+|++++.|+.+++.
T Consensus 203 iaDr~yvle~Griv~~G~~~eL~ 225 (237)
T COG0410 203 IADRGYVLENGRIVLSGTAAELL 225 (237)
T ss_pred hhCEEEEEeCCEEEEecCHHHHh
Confidence 99999999999999999999875
No 125
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-33 Score=316.13 Aligned_cols=211 Identities=29% Similarity=0.411 Sum_probs=168.4
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCCCC
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQHDN 249 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~ 249 (1436)
+..+++++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.
T Consensus 8 l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~ 84 (239)
T cd03296 8 VSKRFGDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYA 84 (239)
T ss_pred EEEEECCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCc
Confidence 334444567999999999999999999999999999999999999887 9999999988754332 356999999998
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLV 329 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 329 (1436)
+++.+||+||+.++....+...+. .. .+....++.+++.+||++..+..
T Consensus 85 ~~~~~tv~e~l~~~~~~~~~~~~~------~~------------------------~~~~~~~~~~l~~~~l~~~~~~~- 133 (239)
T cd03296 85 LFRHMTVFDNVAFGLRVKPRSERP------PE------------------------AEIRAKVHELLKLVQLDWLADRY- 133 (239)
T ss_pred ccCCCCHHHHHhhhhhhccccccC------CH------------------------HHHHHHHHHHHHHcCChhhhhcC-
Confidence 899999999998865332110000 00 00112356788999997655544
Q ss_pred cCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 038815 330 GDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDII 404 (1436)
Q Consensus 330 g~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vi 404 (1436)
+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+..++.+++|+|+
T Consensus 134 ----~~~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tvii~sH~~~~~~~~~d~i~ 208 (239)
T cd03296 134 ----PAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELH-VTTVFVTHDQEEALEVADRVV 208 (239)
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEE
Confidence 457999999999998776 5999999999999999999999999865334 455557788888999999999
Q ss_pred EecCCeEEEecChHHH
Q 038815 405 LLSDGLIVYLGPRELV 420 (1436)
Q Consensus 405 lL~~G~iv~~G~~~~~ 420 (1436)
+|++|++++.|+.+++
T Consensus 209 ~l~~G~i~~~~~~~~~ 224 (239)
T cd03296 209 VMNKGRIEQVGTPDEV 224 (239)
T ss_pred EEECCeEEEecCHHHH
Confidence 9999999999998765
No 126
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.8e-33 Score=329.94 Aligned_cols=199 Identities=26% Similarity=0.357 Sum_probs=171.4
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|++..+. ++.+|+|||+.|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 41 ~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~~ 105 (340)
T PRK13536 41 AIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVPV 105 (340)
T ss_pred eEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEEC
Confidence 578888887653 3579999999999999999999999999999999999876 3579999999875
Q ss_pred cc--ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 038815 946 KQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQ 1023 (1436)
Q Consensus 946 ~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1023 (1436)
.. ...++.+||++|+..+++.+||+|++.+.+.++. .+..+..+.++++++.++|.+..++.+ ++|||||
T Consensus 106 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~ 177 (340)
T PRK13536 106 PARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGGM 177 (340)
T ss_pred CcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHH
Confidence 42 2356789999999999999999999998665442 233334456788999999998888775 5799999
Q ss_pred HHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1024 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1024 rkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||++||++|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||+++|+.+ ++-+..|+
T Consensus 178 kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~ 241 (340)
T PRK13536 178 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDR 241 (340)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999878999999999975 67777888
No 127
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.7e-33 Score=331.65 Aligned_cols=201 Identities=25% Similarity=0.376 Sum_probs=170.7
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+. ++.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 56777776542 3569999999999999999999999999999999999865 35799999998764
Q ss_pred c-ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 038815 947 Q-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLP-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQR 1024 (1436)
Q Consensus 947 ~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1024 (1436)
. ...++.+|||+|+..++|.+||+||+.|....+.. ...+.++..++++++++.++|.+..+.. +..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRY-----PAQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 2 23356799999999999999999999987653211 1234455567889999999999888776 467999999
Q ss_pred HHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1025 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1025 kRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|+++|++. ++.+..|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dr 206 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADR 206 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999875 899999999974 67788888
No 128
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.8e-33 Score=315.38 Aligned_cols=186 Identities=29% Similarity=0.373 Sum_probs=158.5
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc---c-ccceEEEeccCCCCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE---T-FTRISGYCEQNDIHSPLV 967 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~d~~~~~l 967 (1436)
+.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKL 90 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccCCHhHHHhccEEEecCCccccccC
Confidence 569999999999999999999999999999999999865 3579999999865321 1 235699999999999999
Q ss_pred CHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCC
Q 038815 968 TVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1047 (1436)
Q Consensus 968 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTs 1047 (1436)
||+|++.+....+. ...++..+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+
T Consensus 91 tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt~ 162 (232)
T cd03218 91 TVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSK-----ASSLSGGERRRVEIARALATNPKFLLLDEPFA 162 (232)
T ss_pred cHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcc
Confidence 99999987643332 22334455688999999998877665 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1048 GLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1048 gLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||..++..+.+.|+++++.|.|||+++|++. ++.+..|+
T Consensus 163 ~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~ 202 (232)
T cd03218 163 GVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDR 202 (232)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999877999999999986 67777787
No 129
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.6e-33 Score=327.37 Aligned_cols=199 Identities=27% Similarity=0.346 Sum_probs=168.2
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.+. ++.+|+|||+.+++||++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 367788876542 3569999999999999999999999999999999999765 3579999999865
Q ss_pred cc--ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 038815 946 KQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQ 1023 (1436)
Q Consensus 946 ~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1023 (1436)
.. ...++.+||++|+..+++.+||+|++.+.+..+. .+.++..+.++++++.++|.+..++.+ +.|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 2345679999999988899999999987554331 233334456788999999988877764 5799999
Q ss_pred HHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1024 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1024 rkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~ 204 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDR 204 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999878999999999985 56677887
No 130
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.4e-33 Score=315.58 Aligned_cols=213 Identities=29% Similarity=0.371 Sum_probs=167.9
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc----cceEEEEcCCCC
Q 038815 174 RKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP----QRVAAYISQHDN 249 (1436)
Q Consensus 174 ~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~ 249 (1436)
++++.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.
T Consensus 9 ~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~ 85 (236)
T cd03219 9 RFGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPR 85 (236)
T ss_pred EECCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccc
Confidence 334457999999999999999999999999999999999999887 9999999998765432 245899999999
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLV 329 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 329 (1436)
+++.+||+||+.++....+... ..+. .... ...+....++.+++.+||++..++
T Consensus 86 l~~~~tv~~~l~~~~~~~~~~~-------~~~~------~~~~-----------~~~~~~~~~~~~l~~~~l~~~~~~-- 139 (236)
T cd03219 86 LFPELTVLENVMVAAQARTGSG-------LLLA------RARR-----------EEREARERAEELLERVGLADLADR-- 139 (236)
T ss_pred cccCCCHHHHHHHHHhhccccc-------cccc------cccc-----------cHHHHHHHHHHHHHHcCccchhhC--
Confidence 9999999999988654321000 0000 0000 000112345678899999875554
Q ss_pred cCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 038815 330 GDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDII 404 (1436)
Q Consensus 330 g~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vi 404 (1436)
.++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++ .+ ++|+.++|+.+++.+++|+|+
T Consensus 140 ---~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~vsH~~~~~~~~~d~i~ 214 (236)
T cd03219 140 ---PAGELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RG-ITVLLVEHDMDVVMSLADRVT 214 (236)
T ss_pred ---ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCHHHHHHhCCEEE
Confidence 4557999999999998766 5999999999999999999999999865 34 455567888889999999999
Q ss_pred EecCCeEEEecChHHH
Q 038815 405 LLSDGLIVYLGPRELV 420 (1436)
Q Consensus 405 lL~~G~iv~~G~~~~~ 420 (1436)
+|++|++++.|+++++
T Consensus 215 ~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 215 VLDQGRVIAEGTPDEV 230 (236)
T ss_pred EEeCCEEEeecCHHHh
Confidence 9999999999988775
No 131
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-33 Score=320.21 Aligned_cols=209 Identities=25% Similarity=0.364 Sum_probs=170.8
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-------cceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-------QRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~ 242 (1436)
++.+++..+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++
T Consensus 29 ~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~ 105 (269)
T cd03294 29 EILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKIS 105 (269)
T ss_pred hhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEE
Confidence 3445556678999999999999999999999999999999999999987 9999999988754321 24699
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++.+++.+||+||+.+.....+.. . .+....++.+++.+||+
T Consensus 106 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~ 151 (269)
T cd03294 106 MVFQSFALLPHRTVLENVAFGLEVQGVP----------R------------------------AEREERAAEALELVGLE 151 (269)
T ss_pred EEecCcccCCCCcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCH
Confidence 9999999999999999998865432110 0 00112356688999998
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
+..++.+ +.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.
T Consensus 152 ~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiii~tH~~~~~~ 225 (269)
T cd03294 152 GWEHKYP-----DELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQ-KTIVFITHDLDEAL 225 (269)
T ss_pred hHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHH
Confidence 7666554 47999999999998776 4999999999999999999999999865434 45555788888999
Q ss_pred hhcCeEEEecCCeEEEecChHHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+++|++++|++|++++.|+.+++.
T Consensus 226 ~~~d~v~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 226 RLGDRIAIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999987764
No 132
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.9e-33 Score=314.26 Aligned_cols=206 Identities=24% Similarity=0.368 Sum_probs=167.6
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc----cceEEEEcC
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP----QRVAAYISQ 246 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q 246 (1436)
+..+++++.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|
T Consensus 6 l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q 82 (232)
T cd03218 6 LSKRYGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQ 82 (232)
T ss_pred EEEEeCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecC
Confidence 334444567999999999999999999999999999999999999987 9999999988754332 246899999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccc
Q 038815 247 HDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICAD 326 (1436)
Q Consensus 247 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 326 (1436)
++.+++.+||+||+.+.....+.. + .+....++.+++.+||++..+
T Consensus 83 ~~~~~~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~ 128 (232)
T cd03218 83 EASIFRKLTVEENILAVLEIRGLS----------K------------------------KEREEKLEELLEEFHITHLRK 128 (232)
T ss_pred CccccccCcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhh
Confidence 999999999999998754322110 0 001123567889999987655
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
+. ++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ . +++++.++|+.+++.+++|
T Consensus 129 ~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d 201 (232)
T cd03218 129 SK-----ASSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-R-GIGVLITDHNVRETLSITD 201 (232)
T ss_pred CC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCC
Confidence 44 457999999999998766 5999999999999999999999998764 3 4455667888889999999
Q ss_pred eEEEecCCeEEEecChHHH
Q 038815 402 DIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 402 ~vilL~~G~iv~~G~~~~~ 420 (1436)
+|++|++|++++.|+.+++
T Consensus 202 ~i~~l~~G~i~~~~~~~~~ 220 (232)
T cd03218 202 RAYIIYEGKVLAEGTPEEI 220 (232)
T ss_pred EEEEEECCeEEEEeCHHHh
Confidence 9999999999999988765
No 133
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-33 Score=313.75 Aligned_cols=199 Identities=31% Similarity=0.389 Sum_probs=164.8
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc------cceEEEEcCCCCCCC
Q 038815 179 TILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP------QRVAAYISQHDNHIG 252 (1436)
Q Consensus 179 ~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 252 (1436)
++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 7999999999999999999999999999999999999987 9999999998754321 356999999999999
Q ss_pred CCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCc
Q 038815 253 EMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDE 332 (1436)
Q Consensus 253 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 332 (1436)
.+||+||+.+.....+.. . ......++.+++.+||++..+..
T Consensus 96 ~~t~~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~---- 137 (233)
T cd03258 96 SRTVFENVALPLEIAGVP----------K------------------------AEIEERVLELLELVGLEDKADAY---- 137 (233)
T ss_pred CCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCChhhhhcC----
Confidence 999999998864332110 0 00112356789999998766544
Q ss_pred ccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|+
T Consensus 138 -~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 138 -PAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINREL-GLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 457999999999998766 599999999999999999999999876533 4455557788888999999999999
Q ss_pred CCeEEEecChHHH
Q 038815 408 DGLIVYLGPRELV 420 (1436)
Q Consensus 408 ~G~iv~~G~~~~~ 420 (1436)
+|++++.|+.+++
T Consensus 216 ~G~i~~~~~~~~~ 228 (233)
T cd03258 216 KGEVVEEGTVEEV 228 (233)
T ss_pred CCEEEEecCHHHH
Confidence 9999999988765
No 134
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-33 Score=321.85 Aligned_cols=213 Identities=27% Similarity=0.408 Sum_probs=170.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC-----ccceEEEEcCCCC-CC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE-----PQRVAAYISQHDN-HI 251 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 251 (1436)
+++|+|||++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999987 999999999886532 2467999999863 44
Q ss_pred CCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc--ccccccc
Q 038815 252 GEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD--ICADTLV 329 (1436)
Q Consensus 252 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~~t~v 329 (1436)
..+||+||+.|+....+.. + .+....++++++.+||+ +..|
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~--- 139 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------E------------------------EEIENRVKRAMNIVGLDYEDYKD--- 139 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------H------------------------HHHHHHHHHHHHHcCCCchhhcc---
Confidence 4689999999864322110 0 11223456789999996 4344
Q ss_pred cCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 038815 330 GDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDII 404 (1436)
Q Consensus 330 g~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vi 404 (1436)
..++.|||||||||+||++++ |+|||||+|||+.++.++.+.|+++++. .+++|+.++|+..++.++||+|+
T Consensus 140 --~~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 140 --KSPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred --CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 456689999999999988774 9999999999999999999999998653 35566668888899999999999
Q ss_pred EecCCeEEEecChHHHHH---HHHhcCCCCCC
Q 038815 405 LLSDGLIVYLGPRELVLD---FFESMGFKCPE 433 (1436)
Q Consensus 405 lL~~G~iv~~G~~~~~~~---~F~~lGf~cp~ 433 (1436)
+|++|++++.|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988743 23345665554
No 135
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=333.27 Aligned_cols=199 Identities=25% Similarity=0.358 Sum_probs=170.1
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+. ++.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 367778876542 3569999999999999999999999999999999999865 3579999999875
Q ss_pred cc-ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 038815 946 KQ-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQR 1024 (1436)
Q Consensus 946 ~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1024 (1436)
.. ...++.+|||+|+..+++.+||+||+.|....+. .+.++..+.++++++.++|.+..+..+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 42 2234679999999999999999999998765432 234455567899999999998877763 57999999
Q ss_pred HHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1025 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1025 kRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~ 203 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADK 203 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998765 899999999985 67788888
No 136
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.9e-33 Score=310.59 Aligned_cols=182 Identities=29% Similarity=0.357 Sum_probs=153.4
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccccccceEEEeccCCC-CCCCCCHH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQETFTRISGYCEQNDI-HSPLVTVY 970 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~-~~~~lTv~ 970 (1436)
+.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+......++.+||++|++. .+...||+
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 469999999999999999999999999999999999865 457999999987643345567999999964 33467999
Q ss_pred HHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCC
Q 038815 971 ESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1050 (1436)
Q Consensus 971 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD 1050 (1436)
||+.+....+ . . ..+.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~--~---~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL--D---A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc--C---c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754322 1 1 1245789999999988777763 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1051 ARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1051 ~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+.+...+.+.|++++++|+|||+++|++. ++-+..|+
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~ 195 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDR 195 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999877999999999985 35555665
No 137
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=4.6e-33 Score=309.49 Aligned_cols=199 Identities=30% Similarity=0.435 Sum_probs=162.7
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCCCCCCC
Q 038815 174 RKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQHDNHIG 252 (1436)
Q Consensus 174 ~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~ 252 (1436)
+++.+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++
T Consensus 9 ~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~ 85 (213)
T cd03301 9 RFGNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYP 85 (213)
T ss_pred EECCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhcc
Confidence 334457999999999999999999999999999999999999887 9999999998754332 356999999998889
Q ss_pred CCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCc
Q 038815 253 EMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDE 332 (1436)
Q Consensus 253 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 332 (1436)
.+||+||+.++.+..+.. . .+....++.+++.+||++..+..
T Consensus 86 ~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~---- 127 (213)
T cd03301 86 HMTVYDNIAFGLKLRKVP----------K------------------------DEIDERVREVAELLQIEHLLDRK---- 127 (213)
T ss_pred CCCHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCHHHHhCC----
Confidence 999999998864332110 0 00112356778999998766654
Q ss_pred ccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
++.||||||||++||+++ +++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|++|+
T Consensus 128 -~~~LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~~sH~~~~~~~~~d~i~~l~ 205 (213)
T cd03301 128 -PKQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLG-TTTIYVTHDQVEAMTMADRIAVMN 205 (213)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEEE
Confidence 457999999999998766 5999999999999999999999999875434 455557788889999999999999
Q ss_pred CCeEEEec
Q 038815 408 DGLIVYLG 415 (1436)
Q Consensus 408 ~G~iv~~G 415 (1436)
+|++++.|
T Consensus 206 ~g~~~~~g 213 (213)
T cd03301 206 DGQIQQIG 213 (213)
T ss_pred CCEEEecC
Confidence 99999876
No 138
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-33 Score=313.20 Aligned_cols=202 Identities=24% Similarity=0.330 Sum_probs=164.9
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.++.. ...+.+|+|+|+.|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 37788888765310 011469999999999999999999999999999999999865 4589999999865
Q ss_pred cccc------c-cceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 038815 946 KQET------F-TRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSG 1018 (1436)
Q Consensus 946 ~~~~------~-~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1018 (1436)
.... . ++.+||++|+..+++.+||+|++.+...++ ....++..+.++++++.+||.+..+.. +..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHR-----PSE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhh
Confidence 3211 2 256999999998888999999998865432 122334456788999999998777665 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1019 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1019 lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ .|+|||+++|++.. + +.+|+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~-~-~~~~~ 214 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQL-A-KRMSR 214 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-H-HhhCE
Confidence 999999999999999999999999999999999999999999999876 58999999999854 3 33455
No 139
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=4e-33 Score=325.31 Aligned_cols=208 Identities=26% Similarity=0.328 Sum_probs=173.6
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC--ccceEEEEcCC
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE--PQRVAAYISQH 247 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~ 247 (1436)
++.++++++.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|+
T Consensus 7 ~l~~~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~ 83 (301)
T TIGR03522 7 SLTKLYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEH 83 (301)
T ss_pred EEEEEECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCC
Confidence 3444555677999999999999999999999999999999999999987 999999999875422 24579999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
+.+++.+||.|||.+.++..+... .+....++.+++.+||++..++
T Consensus 84 ~~l~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~ 129 (301)
T TIGR03522 84 NPLYLDMYVREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHK 129 (301)
T ss_pred CCCCCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcC
Confidence 999999999999998765442110 0012235678999999987775
Q ss_pred cccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
.+ +.|||||||||+||++++ ++|||||+|||+.++.++.+.++++.. + ++|+.++|..+++.++||+
T Consensus 130 ~~-----~~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiii~sH~l~~~~~~~d~ 201 (301)
T TIGR03522 130 KI-----GQLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK--D-KTIILSTHIMQEVEAICDR 201 (301)
T ss_pred ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC--C-CEEEEEcCCHHHHHHhCCE
Confidence 54 469999999999987764 999999999999999999999998742 4 5566688899999999999
Q ss_pred EEEecCCeEEEecChHHHHH
Q 038815 403 IILLSDGLIVYLGPRELVLD 422 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~~ 422 (1436)
|++|++|++++.|+.+++..
T Consensus 202 i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 202 VIIINKGKIVADKKLDELSA 221 (301)
T ss_pred EEEEECCEEEEeCCHHHHHH
Confidence 99999999999999998754
No 140
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-33 Score=313.56 Aligned_cols=201 Identities=26% Similarity=0.370 Sum_probs=165.7
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 56778876553 2569999999999999999999999999999999999865 35799999998653
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 038815 947 QE-TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLP-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQR 1024 (1436)
Q Consensus 947 ~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1024 (1436)
.. ..++.++|++|++.+++.+||+|++.+....+.. ......+..+.++++++.++|.+..+..+ ..||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHH
Confidence 21 2245799999999888889999999886543211 00122334456789999999987777653 57999999
Q ss_pred HHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1025 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1025 kRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~ 206 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADR 206 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999875 899999999984 46667787
No 141
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-33 Score=331.26 Aligned_cols=199 Identities=24% Similarity=0.336 Sum_probs=172.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|++..+. +..+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 578888876542 3469999999999999999999999999999999999876 4579999999875
Q ss_pred cc-ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 038815 946 KQ-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQR 1024 (1436)
Q Consensus 946 ~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1024 (1436)
.. ...+|.+|||+|+..++|++||.||+.|....+ ..+..+..++++++++.++|.+..+.. +.+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~-----~~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRK-----PHQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 42 235678999999999999999999999976543 234455667899999999999888776 467999999
Q ss_pred HHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1025 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1025 kRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||+|+.+|++|+|||||+|||..++..+.+.|+++.+ .|.|+|+++|++. +++.+-|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDr 219 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGR 219 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999866 4899999999975 68888888
No 142
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.9e-33 Score=314.18 Aligned_cols=204 Identities=25% Similarity=0.353 Sum_probs=164.1
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC-----CCCCCcccEEEEcCccCCCCC-----ccceEE
Q 038815 173 TRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKL-----DSSLKVSGRVTYNGHNMDEFE-----PQRVAA 242 (1436)
Q Consensus 173 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~-----~~~~~~~G~I~~~G~~~~~~~-----~~~~~~ 242 (1436)
.+++++++|+|+|++|++||+++|+|||||||||||++|+|.+ +|. +|+|.++|.++.... .++.++
T Consensus 8 ~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~ 84 (227)
T cd03260 8 VYYGDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVG 84 (227)
T ss_pred EEcCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEE
Confidence 3344457999999999999999999999999999999999999 776 999999999875432 235799
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++.++ .+||+||+.++.+..+... + .+....++.+++.+||+
T Consensus 85 ~~~q~~~~~-~~tv~e~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~ 130 (227)
T cd03260 85 MVFQKPNPF-PGSIYDNVAYGLRLHGIKL---------K------------------------EELDERVEEALRKAALW 130 (227)
T ss_pred EEecCchhc-cccHHHHHHhHHHhcCCCc---------H------------------------HHHHHHHHHHHHHcCCC
Confidence 999998877 8999999988654321100 0 00112346678999998
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
+..+..+. ++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++ + ++|+.++|+.+++.
T Consensus 131 ~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~ 204 (227)
T cd03260 131 DEVKDRLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAA 204 (227)
T ss_pred hHHhccCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHH
Confidence 65554320 468999999999998766 5999999999999999999999999864 3 55666788888999
Q ss_pred hhcCeEEEecCCeEEEecChHH
Q 038815 398 DLFDDIILLSDGLIVYLGPREL 419 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~ 419 (1436)
+++|+|++|++|++++.|++++
T Consensus 205 ~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 205 RVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HhCCEEEEEeCCEEEEecCccc
Confidence 9999999999999999998754
No 143
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-33 Score=329.68 Aligned_cols=202 Identities=24% Similarity=0.283 Sum_probs=169.2
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++++|+++.++.. ..++.+|+|+|+.|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5677887765310 013579999999999999999999999999999999999875 35799999998754
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 038815 947 QE------TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLS 1020 (1436)
Q Consensus 947 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1020 (1436)
.. ..++.+||++|+..+++.+||+||+.+....+. .+.++..+.++++++.+||.+..+.. ++.||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRY-----PAQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 21 235679999999999999999999998755431 23444556789999999998877765 35799
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++-+..|+
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~ 210 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDR 210 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999999765 899999999985 56677888
No 144
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.8e-33 Score=329.67 Aligned_cols=188 Identities=24% Similarity=0.269 Sum_probs=164.0
Q ss_pred CceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc---cc----cceEEEeccCCC
Q 038815 890 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE---TF----TRISGYCEQNDI 962 (1436)
Q Consensus 890 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~Q~d~ 962 (1436)
+.+.+|+|+|+.|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.... .+ ++.+|||+|+..
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 34679999999999999999999999999999999999876 4589999999876431 22 568999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 038815 963 HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1042 (1436)
Q Consensus 963 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~l 1042 (1436)
++|.+||+||+.|...+. ..+.+++.+++.++++.+||.+..+.. +..|||||||||+|||+|+.+|+||+|
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~-----p~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRY-----PDELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876543 234556677899999999998887776 357999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1043 DEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1043 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||+|||+.++..+++.++++.+. |+|||+++|+.. ++....|+
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~dr 199 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDR 199 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999998764 899999999975 46777788
No 145
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=4.5e-33 Score=309.55 Aligned_cols=187 Identities=26% Similarity=0.340 Sum_probs=157.6
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc-----ccccceEEEeccCCCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ-----ETFTRISGYCEQNDIHSPL 966 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~~~~ 966 (1436)
+.+|+++|+.++|||++||+|||||||||||++|+|..+ +.+|+|.++|.+... ..+++.++|++|+..+++.
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPH 90 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccchhHHHHHhcceEEecccccCCC
Confidence 469999999999999999999999999999999999865 357999999986521 2345789999999998989
Q ss_pred CCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCC
Q 038815 967 VTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1046 (1436)
Q Consensus 967 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPT 1046 (1436)
+|++|++.+...... ..+.++..+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||
T Consensus 91 ~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEP~ 163 (213)
T cd03262 91 LTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAY-----PAQLSGGQQQRVAIARALAMNPKVMLFDEPT 163 (213)
T ss_pred CcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhC-----ccccCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 999999987643111 123334456788999999998777765 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1047 SGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1047 sgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+|||+.+...+.+.|++++++|+|||+++|++. ++-+..|+
T Consensus 164 ~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~ 204 (213)
T cd03262 164 SALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADR 204 (213)
T ss_pred cCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999877999999999975 44455665
No 146
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.8e-33 Score=308.99 Aligned_cols=182 Identities=30% Similarity=0.388 Sum_probs=154.9
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc-ccccceEEEeccCCCCCCCCCHH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ-ETFTRISGYCEQNDIHSPLVTVY 970 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~ 970 (1436)
+.+|+|+|+.+++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++||+|++.+++..||+
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTAR 90 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccchHHHHhhEEEecCCCccCccCcHH
Confidence 469999999999999999999999999999999999865 458999999976532 23456799999999888899999
Q ss_pred HHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCC
Q 038815 971 ESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1050 (1436)
Q Consensus 971 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD 1050 (1436)
|++.+....+. . ..+.++++++.++|.+..+..+ ..|||||||||+||++|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD 158 (208)
T cd03268 91 ENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQRLGIALALLGNPDLLILDEPTNGLD 158 (208)
T ss_pred HHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCC
Confidence 99988654321 1 1345788999999988777653 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1051 ARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1051 ~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+.+...+.+.|++++++|+|||+++|++. ++-+..|+
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~ 195 (208)
T cd03268 159 PDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADR 195 (208)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCE
Confidence 99999999999998877999999999975 34444555
No 147
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-33 Score=309.33 Aligned_cols=195 Identities=30% Similarity=0.387 Sum_probs=161.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCCCCCCCCHH
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDNHIGEMTVR 257 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 257 (1436)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 57999999999999999999999999999999999999887 9999999988753 346799999999889999999
Q ss_pred HHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccCCC
Q 038815 258 ETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIRGI 337 (1436)
Q Consensus 258 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~rgL 337 (1436)
||+.++....+.. .. .....++.+++.+||++..+.. +..|
T Consensus 92 e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~-----~~~L 132 (220)
T cd03293 92 DNVALGLELQGVP----------KA------------------------EARERAEELLELVGLSGFENAY-----PHQL 132 (220)
T ss_pred HHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhCC-----cccC
Confidence 9998865432110 00 0112356788999998765544 4579
Q ss_pred CHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec--CCe
Q 038815 338 SGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS--DGL 410 (1436)
Q Consensus 338 SGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~--~G~ 410 (1436)
||||||||+||+++ +++|||||+|||+.++..+.+.|+++....+ ++|+.++|+.+++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETG-KTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 99999999998766 5999999999999999999999998755334 455557788888999999999999 799
Q ss_pred EEEecCh
Q 038815 411 IVYLGPR 417 (1436)
Q Consensus 411 iv~~G~~ 417 (1436)
++..++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9988764
No 148
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-33 Score=308.39 Aligned_cols=197 Identities=28% Similarity=0.402 Sum_probs=161.7
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCCCCCC
Q 038815 174 RKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDNHIGE 253 (1436)
Q Consensus 174 ~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 253 (1436)
+++++.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.
T Consensus 9 ~~~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~ 84 (210)
T cd03269 9 RFGRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPK 84 (210)
T ss_pred EECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcC
Confidence 334457999999999999999999999999999999999999887 9999999987653 234679999999988999
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM 333 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 333 (1436)
+||+||+.+....++... .+....++++++.+||++..++.
T Consensus 85 ~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 125 (210)
T cd03269 85 MKVIDQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKR----- 125 (210)
T ss_pred CcHHHHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCc-----
Confidence 999999988644322100 00112356788999998766644
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ . +.+|+.++|+.+++.+++|++++|++
T Consensus 126 ~~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~ 203 (210)
T cd03269 126 VEELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-A-GKTVILSTHQMELVEELCDRVLLLNK 203 (210)
T ss_pred HhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEECCCHHHHHHhhhEEEEEeC
Confidence 457999999999998766 5999999999999999999999998764 3 44566678888899999999999999
Q ss_pred CeEEEec
Q 038815 409 GLIVYLG 415 (1436)
Q Consensus 409 G~iv~~G 415 (1436)
|++++.|
T Consensus 204 g~i~~~~ 210 (210)
T cd03269 204 GRAVLYG 210 (210)
T ss_pred CEEEecC
Confidence 9998764
No 149
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=4.4e-33 Score=312.75 Aligned_cols=189 Identities=25% Similarity=0.274 Sum_probs=156.3
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEEcCeeccc-----ccccceEEEeccCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSITISGYLKKQ-----ETFTRISGYCEQNDIH 963 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~ 963 (1436)
+.+|+|+|+.+++||+++|+||||||||||+++|+|.... .+.+|+|.++|.+... ..+++.+||++|++.+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 92 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQKPNP 92 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHHHhhEEEEecCchh
Confidence 4699999999999999999999999999999999997610 2458999999986532 2345679999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceec
Q 038815 964 SPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1043 (1436)
Q Consensus 964 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lD 1043 (1436)
+ .+||+||+.+....+. ....++..+.++++++.+||.+..+.... +..||||||||++||++|+.+|++|+||
T Consensus 93 ~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~llllD 166 (227)
T cd03260 93 F-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQQRLCLARALANEPEVLLLD 166 (227)
T ss_pred c-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 7 7999999988654431 11222234568899999999876665421 2579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1044 EPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1044 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||+.++..+++.|++++++ +|||+++|++. ++.+..|+
T Consensus 167 EPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~ 209 (227)
T cd03260 167 EPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADR 209 (227)
T ss_pred CCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCE
Confidence 999999999999999999999876 99999999975 56667787
No 150
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-33 Score=313.37 Aligned_cols=185 Identities=26% Similarity=0.309 Sum_probs=159.0
Q ss_pred EEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc------cccceEEEeccCCCCCCC
Q 038815 893 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE------TFTRISGYCEQNDIHSPL 966 (1436)
Q Consensus 893 ~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~d~~~~~ 966 (1436)
.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSS 96 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCC
Confidence 79999999999999999999999999999999999875 3579999999875321 235679999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCC
Q 038815 967 VTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1046 (1436)
Q Consensus 967 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPT 1046 (1436)
+|++|++.+....+. .......+.++++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||
T Consensus 97 ~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllLDEP~ 168 (233)
T cd03258 97 RTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAY-----PAQLSGGQKQRVGIARALANNPKVLLCDEAT 168 (233)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCC
Confidence 999999988654332 23344456788999999998877765 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1047 SGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1047 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+|||+.+...+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~ 210 (233)
T cd03258 169 SALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDR 210 (233)
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999775 899999999975 56677787
No 151
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=6.8e-33 Score=310.13 Aligned_cols=202 Identities=25% Similarity=0.368 Sum_probs=162.8
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc----cceEEEEcCCC
Q 038815 173 TRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP----QRVAAYISQHD 248 (1436)
Q Consensus 173 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d 248 (1436)
.+++.+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 8 ~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~ 84 (222)
T cd03224 8 AGYGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGR 84 (222)
T ss_pred eecCCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEecccc
Confidence 3444457999999999999999999999999999999999999987 9999999988755432 35699999999
Q ss_pred CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHc-CCcccccc
Q 038815 249 NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVL-GLDICADT 327 (1436)
Q Consensus 249 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t 327 (1436)
.+++.+||+||+.++....+ . . +.....+.+++.+ ++++..++
T Consensus 85 ~~~~~~t~~~~l~~~~~~~~--~----------~------------------------~~~~~~~~~l~~~~~l~~~~~~ 128 (222)
T cd03224 85 RIFPELTVEENLLLGAYARR--R----------A------------------------KRKARLERVYELFPRLKERRKQ 128 (222)
T ss_pred ccCCCCcHHHHHHHHhhhcC--c----------h------------------------hHHHHHHHHHHHHHhhhhhhhC
Confidence 99999999999988643221 0 0 0011233456666 46554444
Q ss_pred cccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
.++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.+++|+
T Consensus 129 -----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~ 201 (222)
T cd03224 129 -----LAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-E-GVTILLVEQNARFALEIADR 201 (222)
T ss_pred -----chhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhccE
Confidence 3457999999999998766 5999999999999999999999998765 3 45556678888899999999
Q ss_pred EEEecCCeEEEecChHHH
Q 038815 403 IILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~ 420 (1436)
|++|++|++++.|+.+++
T Consensus 202 i~~l~~G~i~~~~~~~~~ 219 (222)
T cd03224 202 AYVLERGRVVLEGTAAEL 219 (222)
T ss_pred EEEeeCCeEEEeCCHHHH
Confidence 999999999999988765
No 152
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=5.8e-33 Score=303.02 Aligned_cols=178 Identities=25% Similarity=0.316 Sum_probs=150.3
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc-----ccccceEEEeccCCC-CCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ-----ETFTRISGYCEQNDI-HSP 965 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~-~~~ 965 (1436)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|+.. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 569999999999999999999999999999999999865 357999999986531 134567999999963 233
Q ss_pred CCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCC
Q 038815 966 LVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1045 (1436)
Q Consensus 966 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEP 1045 (1436)
..||+||+.+....+ ..+.++..+.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 479999998865432 1233444556889999999988777753 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCC
Q 038815 1046 TSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPS 1079 (1436)
Q Consensus 1046 TsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps 1079 (1436)
|+|||+.+...+.+.|++++++|+|||+++|++.
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999999877999999999975
No 153
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=6.3e-33 Score=309.96 Aligned_cols=198 Identities=32% Similarity=0.440 Sum_probs=163.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE--PQRVAAYISQHDNHIGEMT 255 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 255 (1436)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 57999999999999999999999999999999999999887 999999999875321 2356999999998888999
Q ss_pred HHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccC
Q 038815 256 VRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIR 335 (1436)
Q Consensus 256 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~r 335 (1436)
|+||+.+..+..+.. .. +....++.+++.+||++..++.+ .
T Consensus 92 v~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 132 (220)
T cd03263 92 VREHLRFYARLKGLP----------KS------------------------EIKEEVELLLRVLGLTDKANKRA-----R 132 (220)
T ss_pred HHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCHHHHhChh-----h
Confidence 999998865433210 00 01123466788999987666544 4
Q ss_pred CCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 038815 336 GISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGL 410 (1436)
Q Consensus 336 gLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~ 410 (1436)
.|||||||||+||+++ +++|||||+|||+.+...+.+.|+++++ + ++++.++|+.+++.+++|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 6999999999998766 5999999999999999999999998753 3 556667888888989999999999999
Q ss_pred EEEecChHHH
Q 038815 411 IVYLGPRELV 420 (1436)
Q Consensus 411 iv~~G~~~~~ 420 (1436)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999987754
No 154
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.8e-33 Score=308.85 Aligned_cols=186 Identities=27% Similarity=0.359 Sum_probs=155.0
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc---ccccceEEEeccCCC-CCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ---ETFTRISGYCEQNDI-HSPLV 967 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~-~~~~l 967 (1436)
+.+|+|+|+.+++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|+.. .++..
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 569999999999999999999999999999999999865 357999999976532 234567999999974 35678
Q ss_pred CHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCC
Q 038815 968 TVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1047 (1436)
Q Consensus 968 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTs 1047 (1436)
|++|++.+....+ ........+.++++++.++|.+..+.. +..|||||||||+||++|+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRS-----PFTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998764432 122333445678999999998776665 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1048 GLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1048 gLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+.++..+.+.|++++++|+|||+++|++. ++-+..|+
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~ 203 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADR 203 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999877999999999975 44455665
No 155
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-32 Score=312.53 Aligned_cols=201 Identities=29% Similarity=0.442 Sum_probs=164.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGEM 254 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 254 (1436)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 56999999999999999999999999999999999999887 9999999988754332 35689999999999999
Q ss_pred CHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc--cccccccCc
Q 038815 255 TVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI--CADTLVGDE 332 (1436)
Q Consensus 255 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~~t~vg~~ 332 (1436)
||+||+.++.+..+.. . .+....++.+++.+||++ ..+ +
T Consensus 91 tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~l~l~~~~~~~-----~ 131 (242)
T cd03295 91 TVEENIALVPKLLKWP----------K------------------------EKIRERADELLALVGLDPAEFAD-----R 131 (242)
T ss_pred cHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCCcHHHHh-----c
Confidence 9999998864332110 0 001123467889999975 333 4
Q ss_pred ccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
.++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|+
T Consensus 132 ~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 132 YPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQEL-GKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 4567999999999998776 499999999999999999999999986533 4555667788888999999999999
Q ss_pred CCeEEEecChHHHH
Q 038815 408 DGLIVYLGPRELVL 421 (1436)
Q Consensus 408 ~G~iv~~G~~~~~~ 421 (1436)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999887653
No 156
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=9.3e-33 Score=308.83 Aligned_cols=201 Identities=24% Similarity=0.323 Sum_probs=162.5
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+... .+.+.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 4567777655310 012569999999999999999999999999999999999865 35799999998653
Q ss_pred cc---c---cc-ceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 038815 947 QE---T---FT-RISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGL 1019 (1436)
Q Consensus 947 ~~---~---~~-~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~l 1019 (1436)
.. . ++ +.++|++|+..+++.+||+|++.+....+. ....+..+.++++++.+||.+..+.. +..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHR-----PSEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhC
Confidence 21 1 22 569999999988889999999988654331 22233345678999999998776665 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1020 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1020 SgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||||++||++|+.+|++|+|||||+|||..++..+.+.|++++++ |+|||+++|++.. + +..|+
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~-~-~~~d~ 210 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLEL-A-KKLDR 210 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-hhcCE
Confidence 999999999999999999999999999999999999999999999764 8999999999863 3 34565
No 157
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-33 Score=318.56 Aligned_cols=188 Identities=24% Similarity=0.271 Sum_probs=159.6
Q ss_pred CceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc---c----ccceEEEeccCCC
Q 038815 890 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE---T----FTRISGYCEQNDI 962 (1436)
Q Consensus 890 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~d~ 962 (1436)
+.+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.+||++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 45679999999999999999999999999999999999865 3579999999865321 1 1357999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 038815 963 HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1042 (1436)
Q Consensus 963 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~l 1042 (1436)
+++.+||+|++.+....+. ....+..+.++++++.++|.+..+..+ +.||||||||++||++|+.+|+||+|
T Consensus 113 ~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9989999999988654321 223344566889999999988777764 57999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1043 DEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1043 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||+|||..+...+.+.|+++++. |+|||+++|++. ++.+..|+
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~ 230 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDR 230 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 9999999999999999999998764 899999999975 46677787
No 158
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-32 Score=312.37 Aligned_cols=208 Identities=30% Similarity=0.400 Sum_probs=164.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC------ccceEEEEcCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE------PQRVAAYISQHDNHI 251 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 251 (1436)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 57999999999999999999999999999999999999887 999999999876543 135689999999899
Q ss_pred CCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccC
Q 038815 252 GEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGD 331 (1436)
Q Consensus 252 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 331 (1436)
+.+||+||+.++..... .. . ... .+... ......++.+++.+||.+..+.
T Consensus 91 ~~~tv~~~l~~~~~~~~-~~-~---~~~------~~~~~---------------~~~~~~~~~~l~~~~l~~~~~~---- 140 (241)
T cd03256 91 ERLSVLENVLSGRLGRR-ST-W---RSL------FGLFP---------------KEEKQRALAALERVGLLDKAYQ---- 140 (241)
T ss_pred ccCcHHHHHHhhhcccc-hh-h---hhh------cccCc---------------HHHHHHHHHHHHHcCChhhhCC----
Confidence 99999999987532110 00 0 000 00000 0012235667899999765554
Q ss_pred cccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 038815 332 EMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILL 406 (1436)
Q Consensus 332 ~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL 406 (1436)
.++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|++|
T Consensus 141 -~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 141 -RADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEG-ITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred -CcccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 4567999999999998766 5999999999999999999999999865334 45566788888999999999999
Q ss_pred cCCeEEEecChHHH
Q 038815 407 SDGLIVYLGPRELV 420 (1436)
Q Consensus 407 ~~G~iv~~G~~~~~ 420 (1436)
++|++++.|+.+++
T Consensus 219 ~~G~i~~~~~~~~~ 232 (241)
T cd03256 219 KDGRIVFDGPPAEL 232 (241)
T ss_pred ECCEEEeecCHHHh
Confidence 99999999998775
No 159
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-33 Score=308.66 Aligned_cols=199 Identities=25% Similarity=0.327 Sum_probs=170.8
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|++|+++. +..+|+|+|+.+++||.++|+|+||||||||+++|+|... +.+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeecc
Confidence 567888887642 2579999999999999999999999999999999999876 35699999998754
Q ss_pred ----cccccceEEEeccCCCC-CCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 947 ----QETFTRISGYCEQNDIH-SPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 947 ----~~~~~~~~gyv~Q~d~~-~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
...+++.+|||+|++.+ +-.-||.|.+.|+..- ...+.++.+++++++++.+|+.++++.. +..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n---~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLEN---LGLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhh---cCCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 34578899999999644 4457999999998643 2345667888999999999999998876 468999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||+||.+|+.+|++|+|||||||||+.+...+++.++++.++ |.|||+++|+.. .+.+.-|+
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~ 208 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADR 208 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCE
Confidence 9999999999999999999999999999999999999999999877 789999999853 45555666
No 160
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-33 Score=314.46 Aligned_cols=189 Identities=30% Similarity=0.312 Sum_probs=156.4
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc------ccccceEEEeccCCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ------ETFTRISGYCEQNDIHSP 965 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~~~~ 965 (1436)
+.+|+|+|+.+++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|+..+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 469999999999999999999999999999999999865 357999999986532 124567999999998889
Q ss_pred CCCHHHHHHHhhhhcC-----CCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 038815 966 LVTVYESLLYSAWLRL-----PPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1040 (1436)
Q Consensus 966 ~lTv~E~l~f~a~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il 1040 (1436)
.+||+|++.+...... ..........+.++++++.++|.+..+.. +..|||||||||+||++|+.+|++|
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----ADQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999987532100 00111123345678899999998776665 3579999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1041 FMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1041 ~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+|||||+|||+.+...+++.|++++++ |+|||+++|+++ ++.+..|+
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~ 214 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADR 214 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999764 899999999986 46667777
No 161
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.4e-32 Score=316.23 Aligned_cols=211 Identities=23% Similarity=0.345 Sum_probs=169.7
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC------ccceEE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE------PQRVAA 242 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~ 242 (1436)
+++..+++++.+|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++
T Consensus 11 ~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~ 87 (269)
T PRK11831 11 RGVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMS 87 (269)
T ss_pred eCeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEE
Confidence 34444455567999999999999999999999999999999999999887 999999998875432 135689
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++..++.+||.||+.+....... .... .....++.+++.+||+
T Consensus 88 ~v~q~~~~~~~~tv~enl~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~gl~ 134 (269)
T PRK11831 88 MLFQSGALFTDMNVFDNVAYPLREHTQ---------LPAP------------------------LLHSTVMMKLEAVGLR 134 (269)
T ss_pred EEecccccCCCCCHHHHHHHHHHHccC---------CCHH------------------------HHHHHHHHHHHHcCCh
Confidence 999999899999999999875421100 0000 0112345678999998
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
+..+.. +..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.
T Consensus 135 ~~~~~~-----~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~ 208 (269)
T PRK11831 135 GAAKLM-----PSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSAL-GVTCVVVSHDVPEVL 208 (269)
T ss_pred hhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHH
Confidence 766654 457999999999998766 599999999999999999999999986533 455556788889999
Q ss_pred hhcCeEEEecCCeEEEecChHHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+++|+|++|++|++++.|+++++.
T Consensus 209 ~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 209 SIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999987753
No 162
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-32 Score=313.96 Aligned_cols=196 Identities=27% Similarity=0.345 Sum_probs=163.4
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+. ++.+|+|+|+.+++||+++|+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 45667765542 2469999999999999999999999999999999999865 35799999998654
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 038815 947 QETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKR 1026 (1436)
Q Consensus 947 ~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkR 1026 (1436)
. ..+.+||++|+..+++..||+|++.+....+ .....+..+.++++++.++|.+..+.. +..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHH
Confidence 2 2345899999998888899999998764432 123344456788999999998776665 35799999999
Q ss_pred HHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1027 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1027 l~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|++. ++.+..|+
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~ 198 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATE 198 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999854 5899999999986 56677787
No 163
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.9e-33 Score=309.29 Aligned_cols=190 Identities=25% Similarity=0.369 Sum_probs=156.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC------ccceEEEEcCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE------PQRVAAYISQHDNHI 251 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 251 (1436)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 46999999999999999999999999999999999999887 999999999875432 235799999999999
Q ss_pred CCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccC
Q 038815 252 GEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGD 331 (1436)
Q Consensus 252 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 331 (1436)
+.+||+||+.++.+..+.. . .+....++.+++.+||++..+..
T Consensus 93 ~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~--- 135 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVP----------P------------------------RDANERVSAALEKVGLEGKAHAL--- 135 (216)
T ss_pred ccccHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCC---
Confidence 9999999999865432110 0 00112356688999998766544
Q ss_pred cccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 038815 332 EMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILL 406 (1436)
Q Consensus 332 ~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL 406 (1436)
+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+.+++.+++|+|++|
T Consensus 136 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 136 --PMQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 457999999999998776 5999999999999999999999998754 3 445566788888999999999999
Q ss_pred cCCeE
Q 038815 407 SDGLI 411 (1436)
Q Consensus 407 ~~G~i 411 (1436)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99974
No 164
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.9e-33 Score=338.09 Aligned_cols=205 Identities=25% Similarity=0.446 Sum_probs=168.8
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCC
Q 038815 176 KHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIG 252 (1436)
Q Consensus 176 ~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 252 (1436)
++.+||||+|++|+|||.+||+|||||||||+.++|...++|+ +|+|++||+|+.+.++ ++.+|+|.|+|.+|.
T Consensus 479 p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs 555 (716)
T KOG0058|consen 479 PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLFS 555 (716)
T ss_pred CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceeec
Confidence 4567999999999999999999999999999999999999998 9999999999988876 478999999999887
Q ss_pred CCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCc
Q 038815 253 EMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDE 332 (1436)
Q Consensus 253 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 332 (1436)
. ||+|||.|+... .+.|..+.++.... ..+. +.++++.+||.||++
T Consensus 556 ~-sI~eNI~YG~~~-------------------------~t~e~i~~AAk~AN-----ah~F---I~~~p~gY~T~VGEk 601 (716)
T KOG0058|consen 556 G-SIRENIAYGLDN-------------------------ATDEEIEAAAKMAN-----AHEF---ITNFPDGYNTVVGEK 601 (716)
T ss_pred c-cHHHHHhcCCCC-------------------------CCHHHHHHHHHHhC-----hHHH---HHhCccccccccCCc
Confidence 5 999999997531 11122222221111 1122 235899999999976
Q ss_pred ccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
.. .||||||||++||||++ |||||.||+||+++...+-+.|.+..+ +.|+++ |.| .-.+.+.+|+|++++
T Consensus 602 G~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlv-IAH-RLSTV~~Ad~Ivvi~ 676 (716)
T KOG0058|consen 602 GS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLV-IAH-RLSTVRHADQIVVID 676 (716)
T ss_pred cc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEE-Eeh-hhhHhhhccEEEEEc
Confidence 55 79999999999999985 999999999999999999999987654 455555 544 456778899999999
Q ss_pred CCeEEEecChHHHHH
Q 038815 408 DGLIVYLGPRELVLD 422 (1436)
Q Consensus 408 ~G~iv~~G~~~~~~~ 422 (1436)
+|++++.|.++++++
T Consensus 677 ~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 677 KGRVVEMGTHDELLS 691 (716)
T ss_pred CCeEEecccHHHHhh
Confidence 999999999999864
No 165
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=8.2e-33 Score=309.03 Aligned_cols=185 Identities=27% Similarity=0.412 Sum_probs=157.6
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc--ccccceEEEeccCCCCCCCCCH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ--ETFTRISGYCEQNDIHSPLVTV 969 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 969 (1436)
+.+|+|+|+.+++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.+||++|+..+++..||
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCH
Confidence 569999999999999999999999999999999999865 358999999987532 2345679999999988889999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCC
Q 038815 970 YESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1049 (1436)
Q Consensus 970 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgL 1049 (1436)
+|++.+....+. .+.++..+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~L 164 (220)
T cd03263 93 REHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGL 164 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 999988654432 223334456889999999987777653 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1050 DARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1050 D~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|+.+...+.+.|+++++ ++|||+++|++. ++-+..|+
T Consensus 165 D~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~ 201 (220)
T cd03263 165 DPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDR 201 (220)
T ss_pred CHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCE
Confidence 99999999999999876 699999999986 45556676
No 166
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-32 Score=319.70 Aligned_cols=213 Identities=25% Similarity=0.350 Sum_probs=168.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC-------CccceEEEEcCCCC-
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-------EPQRVAAYISQHDN- 249 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~- 249 (1436)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 46999999999999999999999999999999999999987 99999999987531 12357999999852
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc-cccccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD-ICADTL 328 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~ 328 (1436)
.+...||+||+.|+....+.. . .+....++.+++.+||+ +..++
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~- 141 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVS----------E------------------------EDAKQKAREMIELVGLPEELLAR- 141 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCChhhhhC-
Confidence 344579999999865432110 0 01122456789999996 44443
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
.++.|||||||||+||+++ +++|||||+|||+.++.++.+.|++++... +++|+.++|+.+++.+++|+|
T Consensus 142 ----~~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~-g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 142 ----SPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEK-GLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred ----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEE
Confidence 4567999999999998776 599999999999999999999999986533 455666888899999999999
Q ss_pred EEecCCeEEEecChHHHHH---HHHhcCCCCCC
Q 038815 404 ILLSDGLIVYLGPRELVLD---FFESMGFKCPE 433 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~~~---~F~~lGf~cp~ 433 (1436)
++|++|++++.|+++++.+ .+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 9999999999999887642 33444554443
No 167
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.8e-33 Score=284.09 Aligned_cols=181 Identities=27% Similarity=0.312 Sum_probs=154.9
Q ss_pred ceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc-ccccceEEEeccCCCCCCCCCHHHHHHH
Q 038815 897 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ-ETFTRISGYCEQNDIHSPLVTVYESLLY 975 (1436)
Q Consensus 897 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f 975 (1436)
..+..|.+||++||+||||||||||||.|||... +.+|+|.|||.+... ....|-++.++|+..+|.++||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 4678999999999999999999999999999877 458999999987643 3456789999999999999999999987
Q ss_pred hhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHH
Q 038815 976 SAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1055 (1436)
Q Consensus 976 ~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~ 1055 (1436)
+.. |.-.-.++.+++++.++..+||..+.+.+ +..|||||||||++||+|+++-+||+||||+|.||+.-+.
T Consensus 95 Gl~---P~LkL~a~~r~~v~~aa~~vGl~~~~~RL-----P~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLS---PGLKLNAEQREKVEAAAAQVGLAGFLKRL-----PGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCC---cccccCHHHHHHHHHHHHHhChhhHhhhC-----ccccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 632 21112234556799999999999998887 4579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1056 IVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1056 ~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.+..++.++++ ++.|+++++|+|+ |+-..-|+
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~ 199 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADR 199 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhc
Confidence 99999999976 5899999999996 45455555
No 168
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-32 Score=328.20 Aligned_cols=204 Identities=23% Similarity=0.328 Sum_probs=169.8
Q ss_pred cccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-------cceEEEEcCC
Q 038815 175 KKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-------QRVAAYISQH 247 (1436)
Q Consensus 175 ~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~ 247 (1436)
++...+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|+
T Consensus 38 ~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~ 114 (400)
T PRK10070 38 TGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQS 114 (400)
T ss_pred cCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECC
Confidence 34456899999999999999999999999999999999999987 9999999998765432 2469999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
+.+++.+||+||+.|+.+..+... . +....++++++.+||++..+.
T Consensus 115 ~~l~~~~Tv~enl~~~~~~~~~~~----------~------------------------~~~~~~~e~L~~~gL~~~~~~ 160 (400)
T PRK10070 115 FALMPHMTVLDNTAFGMELAGINA----------E------------------------ERREKALDALRQVGLENYAHS 160 (400)
T ss_pred CcCCCCCCHHHHHHHHHHhcCCCH----------H------------------------HHHHHHHHHHHHcCCChhhhc
Confidence 999999999999998765432110 0 011235678999999876554
Q ss_pred cccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
.++.|||||||||+||+++ +|||||||+|||+.++.++.+.|+++.+..+ ++||.++|+.+++.+++|+
T Consensus 161 -----~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g-~TIIivTHd~~~~~~~~Dr 234 (400)
T PRK10070 161 -----YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQ-RTIVFISHDLDEAMRIGDR 234 (400)
T ss_pred -----CcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCC-CeEEEEECCHHHHHHhCCE
Confidence 4567999999999998876 4999999999999999999999998765434 4555678889999999999
Q ss_pred EEEecCCeEEEecChHHHH
Q 038815 403 IILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~ 421 (1436)
|++|++|++++.|+++++.
T Consensus 235 i~vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 235 IAIMQNGEVVQVGTPDEIL 253 (400)
T ss_pred EEEEECCEEEecCCHHHHH
Confidence 9999999999999988764
No 169
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=5.7e-33 Score=308.70 Aligned_cols=187 Identities=26% Similarity=0.388 Sum_probs=153.9
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccccccceEEEeccCCCCC--CCCCH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQETFTRISGYCEQNDIHS--PLVTV 969 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~--~~lTv 969 (1436)
+.+|+|+|+.+++||+++|+||||||||||+++|+|... +.+|+|.++|.+.. ..++.++|++|++.+. ...||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 469999999999999999999999999999999999865 35799999997653 3456799999997653 33799
Q ss_pred HHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCC
Q 038815 970 YESLLYSAWLRLP-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1048 (1436)
Q Consensus 970 ~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsg 1048 (1436)
+||+.+....+.. .....+...+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----IGELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 0011223345688999999998776665 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1049 LDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1049 LD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||+.++..+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~ 201 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDR 201 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 9999999999999999877999999999975 45556676
No 170
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=8.6e-33 Score=330.49 Aligned_cols=201 Identities=25% Similarity=0.337 Sum_probs=168.5
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+. ++.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 4 L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i~ 68 (402)
T PRK09536 4 IDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDVE 68 (402)
T ss_pred EEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEcC
Confidence 66778876542 3679999999999999999999999999999999999865 45799999998754
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 038815 947 Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLP-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTE 1022 (1436)
Q Consensus 947 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1022 (1436)
. ...++.+|||+|+..+++.+||+|++.+....... .....++..+.++++++.++|.+..+.. ++.||||
T Consensus 69 ~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-----~~~LSgG 143 (402)
T PRK09536 69 ALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-----VTSLSGG 143 (402)
T ss_pred cCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHH
Confidence 3 34567899999999988899999999875421110 0001233456789999999999888876 4679999
Q ss_pred HHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1023 qrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||+.|||+|+++|++|+|||||+|||+.++..+++.|+++++.|.|||+++|+++ ++.+..|+
T Consensus 144 erQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adr 208 (402)
T PRK09536 144 ERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDE 208 (402)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999877999999999975 57777888
No 171
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.4e-32 Score=307.53 Aligned_cols=199 Identities=25% Similarity=0.307 Sum_probs=163.6
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.++ +++.+|+|+|+.+++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 45677776542 12469999999999999999999999999999999999865 45799999997653
Q ss_pred c---c---cccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 038815 947 Q---E---TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLS 1020 (1436)
Q Consensus 947 ~---~---~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1020 (1436)
. . .+++.++|++|+..+++..||+|++.+....+ ..+.++..+.++++++.+++.+..+.. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCC
Confidence 2 1 24567999999998888899999998865443 123344445678899999998776665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++|.|||+++|++. ++-+..|+
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 206 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYR 206 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999999777899999999975 34444565
No 172
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.4e-32 Score=313.35 Aligned_cols=199 Identities=26% Similarity=0.342 Sum_probs=165.5
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+. ++.+|+|+|+.+++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 66778876552 2469999999999999999999999999999999999865 35799999997653
Q ss_pred c-----------ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC
Q 038815 947 Q-----------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPG 1015 (1436)
Q Consensus 947 ~-----------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1015 (1436)
. ...++.++|++|++.+++..||+|++.+...... ....++..+.++++++.+||.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 1 1235679999999988888999999987543211 123344456788999999998776654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
++.|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++++.|.|||+++|++. ++.+..|+
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~ 213 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADR 213 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 4679999999999999999999999999999999999999999999999877999999999975 46666777
No 173
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.1e-32 Score=304.91 Aligned_cols=185 Identities=23% Similarity=0.363 Sum_probs=156.6
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc---c----ccccceEEEeccCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK---Q----ETFTRISGYCEQNDIHS 964 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~d~~~ 964 (1436)
+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|+..++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 569999999999999999999999999999999999865 45799999998632 1 12456799999999988
Q ss_pred CCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecC
Q 038815 965 PLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1044 (1436)
Q Consensus 965 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDE 1044 (1436)
+..|++||+.+....+ .....+..+.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999999865432 1233444567889999999988777663 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1045 PTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1045 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||+|||+.+...+.+.|+++.++|.|||+++|++. +.+..|+
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~ 202 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADR 202 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCE
Confidence 99999999999999999998877999999999985 2344453
No 174
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.1e-32 Score=329.61 Aligned_cols=213 Identities=26% Similarity=0.405 Sum_probs=173.9
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEc
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYIS 245 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~ 245 (1436)
+++..+++++++|+|+|+.|++||+++|+||||||||||||+|+|.++|. +|+|.++|.++..... ++.++|++
T Consensus 7 ~nls~~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~ 83 (402)
T PRK09536 7 SDLSVEFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVP 83 (402)
T ss_pred eeEEEEECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEc
Confidence 34455556678999999999999999999999999999999999999987 9999999998765432 46799999
Q ss_pred CCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccc
Q 038815 246 QHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICA 325 (1436)
Q Consensus 246 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 325 (1436)
|++.+++.+||+||+.++...... ++. .. ..+....++++++.+||.+..
T Consensus 84 q~~~l~~~~tv~e~v~~~~~~~~~--~~~---~~-------------------------~~~~~~~v~~~le~vgl~~~~ 133 (402)
T PRK09536 84 QDTSLSFEFDVRQVVEMGRTPHRS--RFD---TW-------------------------TETDRAAVERAMERTGVAQFA 133 (402)
T ss_pred cCCCCCCCCCHHHHHHhccchhcc--ccc---CC-------------------------CHHHHHHHHHHHHHcCCchhh
Confidence 999888999999999986421100 000 00 001123467789999998766
Q ss_pred cccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 038815 326 DTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLF 400 (1436)
Q Consensus 326 ~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lf 400 (1436)
++. ++.|||||||||.||+++ +|+|||||+|||+.++.++.+.|+++++ .+ ++|+.++|+.+++.++|
T Consensus 134 ~~~-----~~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g-~TIIivsHdl~~~~~~a 206 (402)
T PRK09536 134 DRP-----VTSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DG-KTAVAAIHDLDLAARYC 206 (402)
T ss_pred cCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEECCHHHHHHhC
Confidence 654 557999999999998877 4999999999999999999999999875 34 45666889999999999
Q ss_pred CeEEEecCCeEEEecChHHHH
Q 038815 401 DDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 401 D~vilL~~G~iv~~G~~~~~~ 421 (1436)
|++++|++|++++.|+++++.
T Consensus 207 drii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 207 DELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred CEEEEEECCEEEEecCHHHHh
Confidence 999999999999999998764
No 175
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-32 Score=312.06 Aligned_cols=186 Identities=27% Similarity=0.358 Sum_probs=157.9
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc---ccccceEEEeccCCCCCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ---ETFTRISGYCEQNDIHSPLVT 968 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lT 968 (1436)
+.+|+|+|+.|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 469999999999999999999999999999999999865 357999999986532 234567999999999999999
Q ss_pred HHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc--ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCC
Q 038815 969 VYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP--LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1046 (1436)
Q Consensus 969 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPT 1046 (1436)
|+||+.+...++. .+.++..+.++++++.++|.+ ..+.. ++.|||||||||+||++|+.+|++|+|||||
T Consensus 92 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 9999988654431 233444567889999999985 55554 4679999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1047 SGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1047 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+|||+.++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~ 205 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADR 205 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999999875 899999999985 45566677
No 176
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.4e-32 Score=320.83 Aligned_cols=197 Identities=25% Similarity=0.361 Sum_probs=168.5
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|++..+. ++.+|+|+|+.+++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 56777776542 3579999999999999999999999999999999999865 45899999998653
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 038815 947 Q--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQR 1024 (1436)
Q Consensus 947 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1024 (1436)
. ...++.+||++|++.+++.+||.|++.+.+.++. .+.++..+.++++++.+||.+..+..+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 2 2345679999999999999999999998776542 233444556899999999998887764 57999999
Q ss_pred HHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1025 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1025 kRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||++||++|+.+|++|+|||||+|||+.+...+++.|+++++ ++|||+++|++. ++-+..|+
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~ 201 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDR 201 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999865 799999999975 57777888
No 177
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1e-32 Score=307.91 Aligned_cols=190 Identities=29% Similarity=0.396 Sum_probs=154.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-------cceEEEEcCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-------QRVAAYISQHDNH 250 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 250 (1436)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 57999999999999999999999999999999999999887 9999999998765431 3569999999999
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVG 330 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 330 (1436)
++.+||+||+.++...++.. . .+....++.+++.+||++..+..
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-- 137 (218)
T cd03255 94 LPDLTALENVELPLLLAGVP----------K------------------------KERRERAEELLERVGLGDRLNHY-- 137 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhcC--
Confidence 99999999999865432110 0 00112356788999998765544
Q ss_pred CcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 038815 331 DEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 405 (1436)
Q Consensus 331 ~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vil 405 (1436)
++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++. .+|++++
T Consensus 138 ---~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 138 ---PSELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAG-TTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ---hhhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CeEEEEECCHHHHh-hhcEEEE
Confidence 457999999999998766 5999999999999999999999999865334 44555677777775 9999999
Q ss_pred ecCCeE
Q 038815 406 LSDGLI 411 (1436)
Q Consensus 406 L~~G~i 411 (1436)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 178
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.5e-32 Score=303.13 Aligned_cols=175 Identities=24% Similarity=0.312 Sum_probs=151.6
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc--ccccceEEEeccCCCCCCCCCH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ--ETFTRISGYCEQNDIHSPLVTV 969 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 969 (1436)
+.+|+|+|+.+++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+||
T Consensus 14 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~tv 91 (204)
T PRK13538 14 RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIRRQRDEYHQDLLYLGHQPGIKTELTA 91 (204)
T ss_pred EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcccchHHhhhheEEeCCccccCcCCcH
Confidence 569999999999999999999999999999999999865 357999999976532 2345679999999988899999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCC
Q 038815 970 YESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1049 (1436)
Q Consensus 970 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgL 1049 (1436)
+|++.+....+. . ...+.++++++.+||.+..++. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 92 ~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 160 (204)
T PRK13538 92 LENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQRRVALARLWLTRAPLWILDEPFTAI 160 (204)
T ss_pred HHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCccC
Confidence 999988654321 1 1234678999999998777765 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEecCCC
Q 038815 1050 DARAAAIVMRTVKNTVETGRTVVCTIHQPS 1079 (1436)
Q Consensus 1050 D~~~~~~i~~~l~~~~~~g~tvi~t~Hqps 1079 (1436)
|+.+...+++.|++++++|.|||+++|++.
T Consensus 161 D~~~~~~l~~~l~~~~~~~~tiii~sh~~~ 190 (204)
T PRK13538 161 DKQGVARLEALLAQHAEQGGMVILTTHQDL 190 (204)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEecChh
Confidence 999999999999998877899999999975
No 179
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.1e-32 Score=305.30 Aligned_cols=196 Identities=27% Similarity=0.367 Sum_probs=160.5
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC-CccceEEEEcCCCCC
Q 038815 172 PTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-EPQRVAAYISQHDNH 250 (1436)
Q Consensus 172 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-~~~~~~~yv~Q~d~~ 250 (1436)
..+++++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+
T Consensus 7 ~~~~~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~ 83 (208)
T cd03268 7 TKTYGKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGF 83 (208)
T ss_pred EEEECCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCcc
Confidence 33344567999999999999999999999999999999999999887 99999999876532 123568999999988
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVG 330 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 330 (1436)
++.+||+||+.+.....+. ....++.+++.+||++..+..
T Consensus 84 ~~~~tv~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~-- 123 (208)
T cd03268 84 YPNLTARENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKK-- 123 (208)
T ss_pred CccCcHHHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhh--
Confidence 9999999999886432110 011245678899998766544
Q ss_pred CcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 038815 331 DEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 405 (1436)
Q Consensus 331 ~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vil 405 (1436)
++.|||||||||+|++++ +++|||||+|||+.++..+.+.|+++.+ .+ .+++.++|+.+++.+++|++++
T Consensus 124 ---~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~v~~ 198 (208)
T cd03268 124 ---VKGFSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QG-ITVLISSHLLSEIQKVADRIGI 198 (208)
T ss_pred ---HhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEcCCHHHHHHhcCEEEE
Confidence 457999999999997766 5999999999999999999999998765 34 4555577888899999999999
Q ss_pred ecCCeEEEec
Q 038815 406 LSDGLIVYLG 415 (1436)
Q Consensus 406 L~~G~iv~~G 415 (1436)
|++|++++.|
T Consensus 199 l~~g~i~~~g 208 (208)
T cd03268 199 INKGKLIEEG 208 (208)
T ss_pred EECCEEEecC
Confidence 9999998765
No 180
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.8e-32 Score=310.40 Aligned_cols=199 Identities=22% Similarity=0.327 Sum_probs=165.1
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.++ ++.+|+|+|+.++|||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 45677766542 2469999999999999999999999999999999999765 45799999998754
Q ss_pred c-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 947 Q-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 947 ~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
. ...++.++|++|+...++.+||+|++.+...... .....+..+.++++++.+||.+..+.. ++.|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHY-----PSELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcC-----hhhcCH
Confidence 2 2345679999999988889999999987542111 123344456788999999998776665 357999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||++||++|+.+|++|+|||||+|||..+...+.+.|++++++|+|||+++|++. ++-+..|+
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 205 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASR 205 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999999877999999999975 45566777
No 181
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-32 Score=314.83 Aligned_cols=212 Identities=27% Similarity=0.349 Sum_probs=168.3
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCC-CCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDN-HIG 252 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~ 252 (1436)
...+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++
T Consensus 17 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (274)
T PRK13647 17 GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVF 93 (274)
T ss_pred CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhc
Confidence 356999999999999999999999999999999999999987 9999999998764332 356999999863 456
Q ss_pred CCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCc
Q 038815 253 EMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDE 332 (1436)
Q Consensus 253 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 332 (1436)
.+||+||+.|+....+.. + .+.+..++.+++.+||.+..+..
T Consensus 94 ~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~L~~~~~~~---- 135 (274)
T PRK13647 94 SSTVWDDVAFGPVNMGLD----------K------------------------DEVERRVEEALKAVRMWDFRDKP---- 135 (274)
T ss_pred cCcHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCHHHhcCC----
Confidence 789999999864322110 0 01122356789999998766544
Q ss_pred ccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
+..|||||||||+||+|+ +|+|||||+|||+.++.++.+.|++++. . +++|+.++|+.+++.+++|+|++|+
T Consensus 136 -~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~ 212 (274)
T PRK13647 136 -PYHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLK 212 (274)
T ss_pred -hhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 457999999999998776 4999999999999999999999999865 3 4555667888889999999999999
Q ss_pred CCeEEEecChHHHH--HHHHhcCCCCC
Q 038815 408 DGLIVYLGPRELVL--DFFESMGFKCP 432 (1436)
Q Consensus 408 ~G~iv~~G~~~~~~--~~F~~lGf~cp 432 (1436)
+|++++.|+++++. +.++..|+.+|
T Consensus 213 ~G~i~~~g~~~~~~~~~~~~~~~~~~~ 239 (274)
T PRK13647 213 EGRVLAEGDKSLLTDEDIVEQAGLRLP 239 (274)
T ss_pred CCEEEEECCHHHhcCHHHHHHcCCCCC
Confidence 99999999986542 23333444443
No 182
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.1e-32 Score=308.51 Aligned_cols=184 Identities=29% Similarity=0.408 Sum_probs=154.0
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc---c-ccceEEEeccCCCCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE---T-FTRISGYCEQNDIHSPLV 967 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~d~~~~~l 967 (1436)
+.+|+|+|+.++|||++||+|||||||||||++|+|..+ +.+|+|.++|.+.... . .++.++|++|+..+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 469999999999999999999999999999999999865 3579999999765321 1 245699999999999999
Q ss_pred CHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHc-CCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCC
Q 038815 968 TVYESLLYSAWLRLPPEVDSETRKMFIEEIMELV-ELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1046 (1436)
Q Consensus 968 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPT 1046 (1436)
|++|++.+....+. ..+..+.++++++.+ ++.+..++. ++.||||||||++||++|+.+|++|+|||||
T Consensus 91 t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 160 (222)
T cd03224 91 TVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGGEQQMLAIARALMSRPKLLLLDEPS 160 (222)
T ss_pred cHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 99999988654321 122334567788887 566655654 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1047 SGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1047 sgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+|||+.++..+++.|+++++.|+|||+++|++. ++.+..|+
T Consensus 161 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 201 (222)
T cd03224 161 EGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADR 201 (222)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccE
Confidence 999999999999999999877899999999974 45666777
No 183
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=9.5e-33 Score=305.05 Aligned_cols=187 Identities=30% Similarity=0.384 Sum_probs=153.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCC-CCCCCCH
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDN-HIGEMTV 256 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 256 (1436)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 57999999999999999999999999999999999999987 9999999988754333457999999964 3557899
Q ss_pred HHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccCC
Q 038815 257 RETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIRG 336 (1436)
Q Consensus 257 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~rg 336 (1436)
+||+.++....+ . ....++.+++.+||++..++. +..
T Consensus 90 ~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~-----~~~ 126 (205)
T cd03226 90 REELLLGLKELD--A------------------------------------GNEQAETVLKDLDLYALKERH-----PLS 126 (205)
T ss_pred HHHHhhhhhhcC--c------------------------------------cHHHHHHHHHHcCCchhcCCC-----chh
Confidence 999987542110 0 001245678999998766644 457
Q ss_pred CCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 038815 337 ISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGLI 411 (1436)
Q Consensus 337 LSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~i 411 (1436)
|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++ .+ .+++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-QG-KAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999998766 5999999999999999999999998764 34 4555577888889999999999999997
Q ss_pred E
Q 038815 412 V 412 (1436)
Q Consensus 412 v 412 (1436)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 184
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.4e-32 Score=311.83 Aligned_cols=209 Identities=27% Similarity=0.334 Sum_probs=164.6
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC------ccceEEEEcCCCCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE------PQRVAAYISQHDNH 250 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~ 250 (1436)
++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+
T Consensus 14 ~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~ 90 (243)
T TIGR02315 14 GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNL 90 (243)
T ss_pred CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcc
Confidence 456999999999999999999999999999999999999887 999999998875432 24569999999989
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVG 330 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 330 (1436)
++.+||+||+.++...... .. .... +.. ..+....++.+++.+||.+..+.
T Consensus 91 ~~~~tv~~~l~~~~~~~~~--~~---~~~~------~~~---------------~~~~~~~~~~~l~~~~l~~~~~~--- 141 (243)
T TIGR02315 91 IERLTVLENVLHGRLGYKP--TW---RSLL------GRF---------------SEEDKERALSALERVGLADKAYQ--- 141 (243)
T ss_pred cccccHHHHHhhccccccc--ch---hhhh------ccc---------------cHHHHHHHHHHHHHcCcHhhhcC---
Confidence 9999999999875321100 00 0000 000 00112235667899999765554
Q ss_pred CcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 038815 331 DEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 405 (1436)
Q Consensus 331 ~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vil 405 (1436)
.++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.+++|+|++
T Consensus 142 --~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~tH~~~~~~~~~d~v~~ 218 (243)
T TIGR02315 142 --RADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKED-GITVIINLHQVDLAKKYADRIVG 218 (243)
T ss_pred --CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEE
Confidence 4557999999999998766 599999999999999999999999986533 44555678888889999999999
Q ss_pred ecCCeEEEecChHHH
Q 038815 406 LSDGLIVYLGPRELV 420 (1436)
Q Consensus 406 L~~G~iv~~G~~~~~ 420 (1436)
|++|++++.|+++++
T Consensus 219 l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 219 LKAGEIVFDGAPSEL 233 (243)
T ss_pred EECCEEEecCCHHHh
Confidence 999999999988764
No 185
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=8.9e-33 Score=313.55 Aligned_cols=189 Identities=28% Similarity=0.279 Sum_probs=156.0
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc------ccccceEEEeccCCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ------ETFTRISGYCEQNDIHSP 965 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~~~~ 965 (1436)
+.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ..+++.+||++|+..+++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 92 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIE 92 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccc
Confidence 469999999999999999999999999999999999865 357999999976532 124567999999998889
Q ss_pred CCCHHHHHHHhhhhcC-----CCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 038815 966 LVTVYESLLYSAWLRL-----PPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1040 (1436)
Q Consensus 966 ~lTv~E~l~f~a~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il 1040 (1436)
.+||+|++.+...... .......+..++++++++.++|.+..+.. +..|||||||||+||++|+.+|++|
T Consensus 93 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~ll 167 (243)
T TIGR02315 93 RLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR-----ADQLSGGQQQRVAIARALAQQPDLI 167 (243)
T ss_pred cccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999976421100 00111223345688999999998776665 3579999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1041 FMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1041 ~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+|||||+|||+.+...+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 168 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~ 215 (243)
T TIGR02315 168 LADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADR 215 (243)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCe
Confidence 999999999999999999999998764 899999999976 45667787
No 186
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.4e-32 Score=324.07 Aligned_cols=206 Identities=25% Similarity=0.314 Sum_probs=170.5
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCc----cCCCCCc-------cceE
Q 038815 173 TRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGH----NMDEFEP-------QRVA 241 (1436)
Q Consensus 173 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~----~~~~~~~-------~~~~ 241 (1436)
++++...+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|+++|. ++..... ++.+
T Consensus 32 ~~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i 108 (382)
T TIGR03415 32 DETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRV 108 (382)
T ss_pred HhhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCE
Confidence 4456678999999999999999999999999999999999999987 999999996 3333221 1469
Q ss_pred EEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCC
Q 038815 242 AYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGL 321 (1436)
Q Consensus 242 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL 321 (1436)
+||+|++.++|.+||+||+.++...++... .+....++++++.+||
T Consensus 109 ~~vfQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL 154 (382)
T TIGR03415 109 SMVFQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGL 154 (382)
T ss_pred EEEECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCC
Confidence 999999999999999999998764432110 0112235678999999
Q ss_pred cccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 038815 322 DICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPET 396 (1436)
Q Consensus 322 ~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~ 396 (1436)
++..|.. +..|||||||||+||+++ +|+|||||+|||+.++.++.+.|+++.+..+ ++++.++|+.+++
T Consensus 155 ~~~~~~~-----~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~-~TII~iTHdl~e~ 228 (382)
T TIGR03415 155 AQWADKK-----PGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLN-KTIIFVSHDLDEA 228 (382)
T ss_pred chhhcCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHH
Confidence 8766554 457999999999998776 5999999999999999999999999865434 5555588899999
Q ss_pred HhhcCeEEEecCCeEEEecChHHHH
Q 038815 397 YDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 397 ~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
.+++|+|++|++|+++..|+++++.
T Consensus 229 ~~l~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 229 LKIGNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred HHhCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999998874
No 187
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-32 Score=317.73 Aligned_cols=203 Identities=21% Similarity=0.290 Sum_probs=165.7
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 67788887653110 012469999999999999999999999999999999999865 45899999998764
Q ss_pred c-----ccccceEEEeccCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC--cccccccCCCCCCC
Q 038815 947 Q-----ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN--PLRQSLVGLPGVSG 1018 (1436)
Q Consensus 947 ~-----~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~--~~~~~~vg~~~~~~ 1018 (1436)
. ...++.+|||+|++. .+...||+|++.|..... ..+.++..+.++++++.+||. +..+.. ++.
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 134578999999863 333579999998865432 234555666789999999997 555654 467
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1019 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1019 lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+..|+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~dr 214 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADR 214 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999999999875 999999999974 46677888
No 188
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=5.9e-33 Score=349.90 Aligned_cols=203 Identities=30% Similarity=0.451 Sum_probs=168.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGEM 254 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 254 (1436)
..+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||.|++..++ |+.++||+|++.+|. -
T Consensus 486 ~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-g 561 (709)
T COG2274 486 PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFS-G 561 (709)
T ss_pred cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhhc-C
Confidence 36999999999999999999999999999999999999998 9999999999987765 588999999986665 6
Q ss_pred CHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCccc
Q 038815 255 TVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMI 334 (1436)
Q Consensus 255 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 334 (1436)
||+||+.++. |+.+.++.+.++...+.. + -...++..+||.||+ +.
T Consensus 562 SI~eNi~l~~-------------------------p~~~~e~i~~A~~~ag~~-----~---fI~~lP~gy~t~v~E-~G 607 (709)
T COG2274 562 SIRENIALGN-------------------------PEATDEEIIEAAQLAGAH-----E---FIENLPMGYDTPVGE-GG 607 (709)
T ss_pred cHHHHHhcCC-------------------------CCCCHHHHHHHHHHhCcH-----H---HHHhccccccccccc-CC
Confidence 9999999853 223334444444332221 1 123588889999996 55
Q ss_pred CCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 038815 335 RGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG 409 (1436)
Q Consensus 335 rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G 409 (1436)
.+||||||||++|||++ ||+||||||+||+.+...|.+.|.++.+ ++|+|+..|+ ..+.+.+|+|++|++|
T Consensus 608 ~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~IaHR--l~ti~~adrIiVl~~G 683 (709)
T COG2274 608 ANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVIIIAHR--LSTIRSADRIIVLDQG 683 (709)
T ss_pred CCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEEEEcc--chHhhhccEEEEccCC
Confidence 68999999999999877 5999999999999999999999998753 5676665444 4678899999999999
Q ss_pred eEEEecChHHHHH
Q 038815 410 LIVYLGPRELVLD 422 (1436)
Q Consensus 410 ~iv~~G~~~~~~~ 422 (1436)
+++.+|+.+++.+
T Consensus 684 kiv~~gs~~ell~ 696 (709)
T COG2274 684 KIVEQGSHEELLA 696 (709)
T ss_pred ceeccCCHHHHHH
Confidence 9999999999875
No 189
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.3e-32 Score=307.37 Aligned_cols=206 Identities=28% Similarity=0.358 Sum_probs=164.9
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc--cceEEEEcCCCC
Q 038815 172 PTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP--QRVAAYISQHDN 249 (1436)
Q Consensus 172 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~--~~~~~yv~Q~d~ 249 (1436)
..+++++++|+|+|+.|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.
T Consensus 8 ~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~ 84 (236)
T TIGR03864 8 SFAYGARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPT 84 (236)
T ss_pred EEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCC
Confidence 33344567999999999999999999999999999999999999887 9999999988754322 246899999988
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLV 329 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 329 (1436)
+++.+||+||+.+.....+.. . .+....++.+++.+||++..++.+
T Consensus 85 ~~~~~t~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~ 130 (236)
T TIGR03864 85 LDLDLSVRQNLRYHAALHGLS----------R------------------------AEARERIAALLARLGLAERADDKV 130 (236)
T ss_pred CcccCcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhcCCh
Confidence 889999999998754322110 0 001123466788999987666544
Q ss_pred cCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 038815 330 GDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDII 404 (1436)
Q Consensus 330 g~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vi 404 (1436)
..|||||||||+||+++ +++|||||+|||+.+...+.+.|+++++..+. +++.++|..+++. .+|+++
T Consensus 131 -----~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~-tiii~sH~~~~~~-~~d~i~ 203 (236)
T TIGR03864 131 -----RELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGL-SVLWATHLVDEIE-ADDRLV 203 (236)
T ss_pred -----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCC-EEEEEecChhhHh-hCCEEE
Confidence 47999999999998766 59999999999999999999999998653344 4555677777775 499999
Q ss_pred EecCCeEEEecChHHHH
Q 038815 405 LLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 405 lL~~G~iv~~G~~~~~~ 421 (1436)
+|++|++++.|+.+++.
T Consensus 204 ~l~~G~i~~~~~~~~~~ 220 (236)
T TIGR03864 204 VLHRGRVLADGAAAELR 220 (236)
T ss_pred EEeCCeEEEeCCHHHHH
Confidence 99999999999887764
No 190
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.8e-32 Score=307.95 Aligned_cols=187 Identities=27% Similarity=0.294 Sum_probs=152.2
Q ss_pred EEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc------ccccceEEEeccCC--CCC
Q 038815 893 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ------ETFTRISGYCEQND--IHS 964 (1436)
Q Consensus 893 ~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d--~~~ 964 (1436)
.+|+|+|+.+++||++||+|||||||||||++|+|... +.+|+|.++|.+... ..+++.+||++|+. .+.
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLN 96 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccchhhHHHhhccEEEEecCchhhcC
Confidence 69999999999999999999999999999999999865 357999999986532 23456899999997 466
Q ss_pred CCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceec
Q 038815 965 PLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1043 (1436)
Q Consensus 965 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lD 1043 (1436)
+.+||+||+.+......+. ...+.....++++++.+++. +..+.. +..||||||||++||++|+.+|++|+||
T Consensus 97 ~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLD 170 (228)
T cd03257 97 PRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PHELSGGQRQRVAIARALALNPKLLIAD 170 (228)
T ss_pred CcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----chhcCHHHHHHHHHHHHHhcCCCEEEec
Confidence 7899999998765433211 11111122236888999995 455554 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1044 EPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1044 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||+.++..+.+.|++++++ |+|||+++|++. ++-+..|+
T Consensus 171 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 215 (228)
T cd03257 171 EPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADR 215 (228)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCe
Confidence 999999999999999999999875 899999999985 45556676
No 191
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.6e-32 Score=306.31 Aligned_cols=193 Identities=31% Similarity=0.449 Sum_probs=159.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC--CccceEEEEcCCCCCCCCCCH
Q 038815 179 TILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF--EPQRVAAYISQHDNHIGEMTV 256 (1436)
Q Consensus 179 ~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lTV 256 (1436)
++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999887 99999999887532 124579999999989999999
Q ss_pred HHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccCC
Q 038815 257 RETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIRG 336 (1436)
Q Consensus 257 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~rg 336 (1436)
+||+.+.....+.. . .+....++.+++.+||++..+.. ++.
T Consensus 96 ~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~ 136 (218)
T cd03266 96 RENLEYFAGLYGLK----------G------------------------DELTARLEELADRLGMEELLDRR-----VGG 136 (218)
T ss_pred HHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHHHHhhh-----hhh
Confidence 99998754332110 0 01122356788999998766544 457
Q ss_pred CCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 038815 337 ISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGLI 411 (1436)
Q Consensus 337 LSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~i 411 (1436)
|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ . +.++|.++|+.+++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-L-GKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999998776 4999999999999999999999998754 3 44556678888899999999999999999
Q ss_pred EEec
Q 038815 412 VYLG 415 (1436)
Q Consensus 412 v~~G 415 (1436)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 192
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-32 Score=315.50 Aligned_cols=219 Identities=28% Similarity=0.383 Sum_probs=173.4
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC-------CccceEEEEcCCC-CC
Q 038815 179 TILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-------EPQRVAAYISQHD-NH 250 (1436)
Q Consensus 179 ~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 250 (1436)
.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999987 99999999987421 1245799999986 23
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc-cccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI-CADTLV 329 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~v 329 (1436)
+...||.||+.|+....+.. + .+....++++++.+||.+ ..+
T Consensus 97 l~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~L~~~~~~--- 139 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIP----------K------------------------EKAEKIAAEKLEMVGLADEFWE--- 139 (288)
T ss_pred cccchHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhcc---
Confidence 44479999999876433210 0 011223567889999953 334
Q ss_pred cCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 038815 330 GDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDII 404 (1436)
Q Consensus 330 g~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vi 404 (1436)
..++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ . +.+|+.++|+.+++.+++|+|+
T Consensus 140 --~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 140 --KSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-S-GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred --CCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 44668999999999998766 5999999999999999999999998764 3 4556667888899999999999
Q ss_pred EecCCeEEEecChHHHH---HHHHhcCCCCCCCCCHHHHH
Q 038815 405 LLSDGLIVYLGPRELVL---DFFESMGFKCPERKGVADFL 441 (1436)
Q Consensus 405 lL~~G~iv~~G~~~~~~---~~F~~lGf~cp~~~~~adfl 441 (1436)
+|++|+++++|+++++. ++++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999998874 34556677776644444433
No 193
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-32 Score=319.87 Aligned_cols=202 Identities=26% Similarity=0.383 Sum_probs=160.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGEM 254 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 254 (1436)
++||+++||+|++||.++|+|+|||||||+||+|.+.++ + +|+|.+||.++++... |+.+|||||+..+|. -
T Consensus 365 ~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFn-d 439 (591)
T KOG0057|consen 365 RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFN-D 439 (591)
T ss_pred CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcccccc-h
Confidence 459999999999999999999999999999999999998 5 9999999999987655 578999999887665 5
Q ss_pred CHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCccc
Q 038815 255 TVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMI 334 (1436)
Q Consensus 255 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 334 (1436)
||.+||.++..- ...++..+++... ...|. ...|++.++|.||+++.
T Consensus 440 TIl~NI~YGn~s-------------------------as~eeV~e~~k~a-----~~hd~---i~~l~~GY~T~VGerG~ 486 (591)
T KOG0057|consen 440 TILYNIKYGNPS-------------------------ASDEEVVEACKRA-----GLHDV---ISRLPDGYQTLVGERGL 486 (591)
T ss_pred hHHHHhhcCCCC-------------------------cCHHHHHHHHHHc-----CcHHH---HHhccccchhhHhhccc
Confidence 999999986311 0111111111100 01111 23478899999998655
Q ss_pred CCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 038815 335 RGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG 409 (1436)
Q Consensus 335 rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G 409 (1436)
-|||||||||+++||. ++++|||||.||+.|..++++.+++. ..++|+|+ +.|.. .+...||+|++|++|
T Consensus 487 -~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI~-IvH~l-~ll~~~DkI~~l~nG 561 (591)
T KOG0057|consen 487 -MLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV--MSGRTVIM-IVHRL-DLLKDFDKIIVLDNG 561 (591)
T ss_pred -ccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh--cCCCeEEE-EEecc-hhHhcCCEEEEEECC
Confidence 6999999999999877 49999999999999999999999983 23556655 55544 567789999999999
Q ss_pred eEEEecChHHHHH
Q 038815 410 LIVYLGPRELVLD 422 (1436)
Q Consensus 410 ~iv~~G~~~~~~~ 422 (1436)
++...|+.++++.
T Consensus 562 ~v~e~gth~ell~ 574 (591)
T KOG0057|consen 562 TVKEYGTHSELLA 574 (591)
T ss_pred eeEEeccHHHHhh
Confidence 9999999999875
No 194
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3e-32 Score=313.45 Aligned_cols=200 Identities=21% Similarity=0.296 Sum_probs=165.9
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.+. ++.+|+|||+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 477888887542 3569999999999999999999999999999999999865 3579999999765
Q ss_pred ccc------cccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 038815 946 KQE------TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGL 1019 (1436)
Q Consensus 946 ~~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~l 1019 (1436)
... ..++.++|++|+..+++.+||.||+.+...... ..+.++..+.++++++.++|.+..+..+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 321 135679999999988899999999987543211 1233334456788999999988777653 579
Q ss_pred CHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1020 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1020 SgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~ 213 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADH 213 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCE
Confidence 999999999999999999999999999999999999999999998765 899999999974 46666777
No 195
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.8e-32 Score=308.82 Aligned_cols=206 Identities=21% Similarity=0.319 Sum_probs=166.5
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC-----ccceEEEEcC
Q 038815 172 PTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE-----PQRVAAYISQ 246 (1436)
Q Consensus 172 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q 246 (1436)
..+++++++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|
T Consensus 8 ~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q 84 (240)
T PRK09493 8 SKHFGPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQ 84 (240)
T ss_pred EEEECCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEec
Confidence 33444567999999999999999999999999999999999999887 999999999875421 2356899999
Q ss_pred CCCCCCCCCHHHHHHhhhhh-ccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccc
Q 038815 247 HDNHIGEMTVRETLAFSARC-QGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICA 325 (1436)
Q Consensus 247 ~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 325 (1436)
++..++.+||+||+.++... .+. .+ .+....++++++.+||++..
T Consensus 85 ~~~~~~~~tv~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~gl~~~~ 130 (240)
T PRK09493 85 QFYLFPHLTALENVMFGPLRVRGA----------SK------------------------EEAEKQARELLAKVGLAERA 130 (240)
T ss_pred ccccCCCCcHHHHHHhHHHHhcCC----------CH------------------------HHHHHHHHHHHHHcCChHHH
Confidence 99889999999999875321 110 00 00112356788999997655
Q ss_pred cccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 038815 326 DTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLF 400 (1436)
Q Consensus 326 ~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lf 400 (1436)
+. .++.|||||||||+||+++ +++|||||+|||..++..+.+.|+++.+ .+ ++++.++|+.+++.+++
T Consensus 131 ~~-----~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~ 203 (240)
T PRK09493 131 HH-----YPSELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-EG-MTMVIVTHEIGFAEKVA 203 (240)
T ss_pred hc-----ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhC
Confidence 54 4457999999999998766 5999999999999999999999998754 34 45556778888999999
Q ss_pred CeEEEecCCeEEEecChHHHH
Q 038815 401 DDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 401 D~vilL~~G~iv~~G~~~~~~ 421 (1436)
|++++|++|++++.|+.+++.
T Consensus 204 d~i~~l~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 204 SRLIFIDKGRIAEDGDPQVLI 224 (240)
T ss_pred CEEEEEECCEEEeeCCHHHHh
Confidence 999999999999999987753
No 196
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.8e-33 Score=339.76 Aligned_cols=194 Identities=27% Similarity=0.409 Sum_probs=164.3
Q ss_pred CceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCe
Q 038815 864 PHSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGY 943 (1436)
Q Consensus 864 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~ 943 (1436)
...++|+||++.++..+ +.++|+|+|++++|||.|||+||||+||||+.+.|-...+ +.+|+|.+||.
T Consensus 463 ~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~ 530 (716)
T KOG0058|consen 463 QGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGV 530 (716)
T ss_pred cceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCe
Confidence 34799999999998643 4689999999999999999999999999999999998765 56899999999
Q ss_pred eccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHH-----HHHHHHHHcCCCcccccccCCCC
Q 038815 944 LKKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKM-----FIEEIMELVELNPLRQSLVGLPG 1015 (1436)
Q Consensus 944 ~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~-----~v~~~l~~l~L~~~~~~~vg~~~ 1015 (1436)
|+++ ..+++.+|+|.|++.++. -||+||+.|+.. +.+.++... .+.+.+ .++.+-.||.||..|
T Consensus 531 ~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI--~~~p~gY~T~VGEkG 602 (716)
T KOG0058|consen 531 PISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFI--TNFPDGYNTVVGEKG 602 (716)
T ss_pred ehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHH--HhCccccccccCCcc
Confidence 8754 457899999999999986 599999999743 333333221 122222 356667899999876
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCC
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPS 1079 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps 1079 (1436)
. .||||||||++|||||++||+||+|||.||.||+++...|.++|.++.+ ++|||++.|..|
T Consensus 603 ~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS 664 (716)
T KOG0058|consen 603 S-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS 664 (716)
T ss_pred c-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh
Confidence 4 7999999999999999999999999999999999999999999998766 699999999875
No 197
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.6e-32 Score=311.04 Aligned_cols=207 Identities=26% Similarity=0.358 Sum_probs=166.5
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC-----------Cccc
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-----------EPQR 239 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-----------~~~~ 239 (1436)
+..+++++++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++
T Consensus 9 l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 85 (250)
T PRK11264 9 LVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQ 85 (250)
T ss_pred eEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhh
Confidence 334444557999999999999999999999999999999999999887 99999999887532 1235
Q ss_pred eEEEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHc
Q 038815 240 VAAYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVL 319 (1436)
Q Consensus 240 ~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 319 (1436)
.++|++|++.+++.+||+||+.++..... +. .. .+....++.+++.+
T Consensus 86 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~-~~--------~~------------------------~~~~~~~~~~l~~~ 132 (250)
T PRK11264 86 HVGFVFQNFNLFPHRTVLENIIEGPVIVK-GE--------PK------------------------EEATARARELLAKV 132 (250)
T ss_pred hEEEEecCcccCCCCCHHHHHHHHHHHhc-CC--------CH------------------------HHHHHHHHHHHHHc
Confidence 68999999989999999999987532110 00 00 01122346678899
Q ss_pred CCcccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChh
Q 038815 320 GLDICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAP 394 (1436)
Q Consensus 320 gL~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~ 394 (1436)
||++..|+ .++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ .+ .+|+.++|+.+
T Consensus 133 gl~~~~~~-----~~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~tH~~~ 205 (250)
T PRK11264 133 GLAGKETS-----YPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-EK-RTMVIVTHEMS 205 (250)
T ss_pred CCcchhhC-----ChhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHH
Confidence 99876554 4557999999999998766 5999999999999999999999998764 34 45555788888
Q ss_pred hHHhhcCeEEEecCCeEEEecChHHH
Q 038815 395 ETYDLFDDIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 395 ~~~~lfD~vilL~~G~iv~~G~~~~~ 420 (1436)
++.+++|+|++|++|++++.|+.+++
T Consensus 206 ~~~~~~d~i~~l~~G~i~~~~~~~~~ 231 (250)
T PRK11264 206 FARDVADRAIFMDQGRIVEQGPAKAL 231 (250)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999998775
No 198
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-32 Score=306.82 Aligned_cols=196 Identities=25% Similarity=0.321 Sum_probs=159.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-------cceEEEEcCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-------QRVAAYISQHDNH 250 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 250 (1436)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 56999999999999999999999999999999999999887 9999999998765432 2469999999989
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVG 330 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 330 (1436)
++.+||+||+.+.....+.. .. +.+..++.+++.+||++..++.
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gl~~~~~~~-- 142 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKK----------PA------------------------EINSRALEMLAAVGLEHRANHR-- 142 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhCC--
Confidence 99999999999864322110 00 0112356788999998765544
Q ss_pred CcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 038815 331 DEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 405 (1436)
Q Consensus 331 ~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vil 405 (1436)
++.|||||||||+||+++ +++|||||+|||+.++.++.+.|+++++.. +++|+.++|+.+++.. +|++++
T Consensus 143 ---~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 143 ---PSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQ-GTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ---hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhC-CCEEEEEeCCHHHHHh-hCEEEE
Confidence 457999999999998766 599999999999999999999999876533 4455557777777765 589999
Q ss_pred ecCCeEEEecCh
Q 038815 406 LSDGLIVYLGPR 417 (1436)
Q Consensus 406 L~~G~iv~~G~~ 417 (1436)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999988864
No 199
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-32 Score=314.14 Aligned_cols=211 Identities=23% Similarity=0.359 Sum_probs=168.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCC-CCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHD-NHIGE 253 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 253 (1436)
..+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 45999999999999999999999999999999999999987 9999999998764322 35789999997 36778
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM 333 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 333 (1436)
+||+|||.|+.+..+.. + .+....++.+++.+||++..+..
T Consensus 97 ~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~----- 137 (279)
T PRK13650 97 ATVEDDVAFGLENKGIP----------H------------------------EEMKERVNEALELVGMQDFKERE----- 137 (279)
T ss_pred ccHHHHHHhhHHhCCCC----------H------------------------HHHHHHHHHHHHHCCCHhHhhCC-----
Confidence 99999999864322110 0 01122356789999998765544
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
++.|||||||||+||+++ +|+|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++ ..+|+|++|++
T Consensus 138 ~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tilivtH~~~~~-~~~dri~~l~~ 215 (279)
T PRK13650 138 PARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQ-MTVISITHDLDEV-ALSDRVLVMKN 215 (279)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHH-HhCCEEEEEEC
Confidence 557999999999998877 4999999999999999999999999865434 4555567777777 58999999999
Q ss_pred CeEEEecChHHHHH---HHHhcCCCCC
Q 038815 409 GLIVYLGPRELVLD---FFESMGFKCP 432 (1436)
Q Consensus 409 G~iv~~G~~~~~~~---~F~~lGf~cp 432 (1436)
|+++..|+++++.+ .++..|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13650 216 GQVESTSTPRELFSRGNDLLQLGLDIP 242 (279)
T ss_pred CEEEEECCHHHHHcChHHHHHcCCCCc
Confidence 99999999887652 2344455443
No 200
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-32 Score=301.77 Aligned_cols=218 Identities=27% Similarity=0.358 Sum_probs=188.2
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-------cceEEEEcCCC
Q 038815 176 KHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-------QRVAAYISQHD 248 (1436)
Q Consensus 176 ~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 248 (1436)
....-++|+|+.|+.||+..|||=||||||||+++|.++.+|+ +|+|.++|.++..... ++.+++|+|+.
T Consensus 39 g~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~F 115 (386)
T COG4175 39 GLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSF 115 (386)
T ss_pred CcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhh
Confidence 4455789999999999999999999999999999999999998 9999999999876654 36789999999
Q ss_pred CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccc
Q 038815 249 NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTL 328 (1436)
Q Consensus 249 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 328 (1436)
.++|..||.||..|+.+.+|++.. +.+.+..++|+..||+..++
T Consensus 116 aLlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~-- 159 (386)
T COG4175 116 ALLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYAD-- 159 (386)
T ss_pred ccccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhh--
Confidence 999999999999999999876421 22344677899999998776
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
.++++||||+||||.+|||+ ||+||||+|+|||--+.++.+.|.++.+..++|+| .++|+.+|++++.|+|
T Consensus 160 ---~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIv-FitHDLdEAlriG~rI 235 (386)
T COG4175 160 ---KYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIV-FITHDLDEALRIGDRI 235 (386)
T ss_pred ---cCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEE-EEecCHHHHHhccceE
Confidence 55778999999999999887 59999999999999999999999888777666655 4899999999999999
Q ss_pred EEecCCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHHhh
Q 038815 404 ILLSDGLIVYLGPRELVLDFFESMGFKCPERKGVADFLQEV 444 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~~v 444 (1436)
.+|.+|+|+..|++++++. .|...-+++|..++
T Consensus 236 aimkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 236 AIMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EEecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 9999999999999999873 35555567776654
No 201
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=2.7e-32 Score=299.67 Aligned_cols=175 Identities=25% Similarity=0.332 Sum_probs=150.6
Q ss_pred ceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc--ccccceEEEeccCCCCCCCCC
Q 038815 891 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ--ETFTRISGYCEQNDIHSPLVT 968 (1436)
Q Consensus 891 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lT 968 (1436)
++.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (198)
T TIGR01189 12 ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPELS 89 (198)
T ss_pred CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEcccchHHhhhheEEeccCcccccCCc
Confidence 3579999999999999999999999999999999999765 357999999976432 234567999999988888899
Q ss_pred HHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCC
Q 038815 969 VYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1048 (1436)
Q Consensus 969 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsg 1048 (1436)
|.|++.+....+. . + .+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|
T Consensus 90 v~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~ 157 (198)
T TIGR01189 90 ALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQRRLALARLWLSRAPLWILDEPTTA 157 (198)
T ss_pred HHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999987644331 1 1 235788999999988777653 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEEecCCC
Q 038815 1049 LDARAAAIVMRTVKNTVETGRTVVCTIHQPS 1079 (1436)
Q Consensus 1049 LD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps 1079 (1436)
||..+...+++.|++++++|.|||+++|++.
T Consensus 158 LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~ 188 (198)
T TIGR01189 158 LDKAGVALLAGLLRAHLARGGIVLLTTHQDL 188 (198)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEEcccc
Confidence 9999999999999998878999999999984
No 202
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-32 Score=293.75 Aligned_cols=201 Identities=26% Similarity=0.309 Sum_probs=162.0
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++.+|++..+.... ....+|+|||+++.+||++||+|+||||||||.++|+|...+ .+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCccc
Confidence 356777776554211 112599999999999999999999999999999999998763 579999999765
Q ss_pred ccc----cccceEEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCC
Q 038815 946 KQE----TFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGVSG 1018 (1436)
Q Consensus 946 ~~~----~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~ 1018 (1436)
... .+.+.+-+|+||+ .+.|..||++.|.=..+. ...++.++ ++.++++.+||.+ ..+.. +..
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~~--~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQQ--RIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHHH--HHHHHHHHcCCCHHHHhcC-----chh
Confidence 432 4678899999997 567999999988543222 22333333 3899999999976 33433 467
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1019 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1019 lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||||++|||||+.+|++|++|||||+||+..+.+|++.|.++.++ |.|.|+++||-+ -+..+.|+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdR 211 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDR 211 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhh
Confidence 9999999999999999999999999999999999999999999999864 889999999954 46666777
No 203
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.7e-32 Score=319.62 Aligned_cols=204 Identities=24% Similarity=0.269 Sum_probs=168.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc------cceEEEEcCCC--C
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP------QRVAAYISQHD--N 249 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d--~ 249 (1436)
..+|+|||++|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 57999999999999999999999999999999999999887 9999999998865432 35799999997 5
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLV 329 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 329 (1436)
++|.+||.||+.+..+....+ ..+ .+....++.+++.+||... +
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~--------~~~------------------------~~~~~~~~~~l~~vgl~~~----~ 154 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPK--------LSR------------------------QEVKDRVKAMMLKVGLLPN----L 154 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccC--------CCH------------------------HHHHHHHHHHHHHcCCChH----H
Confidence 889999999999865432100 000 0112335678999999421 2
Q ss_pred cCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 038815 330 GDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDII 404 (1436)
Q Consensus 330 g~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vi 404 (1436)
.+..+..|||||||||+||+++ +|++||||+|||..++.++++.|+++.+. .+++++.++|+...+.+++|+|+
T Consensus 155 ~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dri~ 233 (331)
T PRK15079 155 INRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDRVL 233 (331)
T ss_pred hcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 3456678999999999998877 49999999999999999999999998654 34566668999999999999999
Q ss_pred EecCCeEEEecChHHHH
Q 038815 405 LLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 405 lL~~G~iv~~G~~~~~~ 421 (1436)
+|++|++++.|+.+++.
T Consensus 234 vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 234 VMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEECCEEEEEcCHHHHH
Confidence 99999999999998774
No 204
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-32 Score=308.94 Aligned_cols=199 Identities=27% Similarity=0.366 Sum_probs=165.2
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++++|+++.++ ++.+|+|+|+.++|||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 56677776542 3569999999999999999999999999999999999865 35799999998653
Q ss_pred c----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 038815 947 Q----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTE 1022 (1436)
Q Consensus 947 ~----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1022 (1436)
. ...++.++|++|++.+++.+||+||+.+...++. ..+.++....++++++.+++.+..+.. ++.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 2 1234679999999988888999999987643321 123334456788999999998766654 3679999
Q ss_pred HHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1023 qrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||+||++|+.+|++|+|||||+|||+.+...+.+.+++++++|.|||+++|++. ++.+..|+
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~ 206 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCER 206 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCE
Confidence 999999999999999999999999999999999999999998877999999999974 56677787
No 205
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-32 Score=308.39 Aligned_cols=208 Identities=22% Similarity=0.339 Sum_probs=167.2
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc----cceEEEEcC
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP----QRVAAYISQ 246 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q 246 (1436)
+..+++++.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|+++|.++..... ++.++|++|
T Consensus 9 l~~~~~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q 85 (241)
T PRK10895 9 LAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQ 85 (241)
T ss_pred cEEEeCCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEecc
Confidence 344444567999999999999999999999999999999999999887 9999999998755332 356999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccc
Q 038815 247 HDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICAD 326 (1436)
Q Consensus 247 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 326 (1436)
++..++.+||.||+.+..+..+. ... .+....++.+++.+||++..+
T Consensus 86 ~~~~~~~~tv~enl~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~~l~~~~~ 132 (241)
T PRK10895 86 EASIFRRLSVYDNLMAVLQIRDD---------LSA------------------------EQREDRANELMEEFHIEHLRD 132 (241)
T ss_pred CCcccccCcHHHHHhhhhhcccc---------cCH------------------------HHHHHHHHHHHHHcCCHHHhh
Confidence 99889999999999875432100 000 011223567889999976544
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
. .++.|||||||||+||+++ +++|||||+|||+.++..+.+.++++.. .+ .+++.++|+..++.+++|
T Consensus 133 ~-----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tiii~sH~~~~~~~~~d 205 (241)
T PRK10895 133 S-----MGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SG-LGVLITDHNVRETLAVCE 205 (241)
T ss_pred c-----chhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEEcCHHHHHHhcC
Confidence 3 4567999999999998766 5999999999999999999999998754 34 455557788889999999
Q ss_pred eEEEecCCeEEEecChHHHH
Q 038815 402 DIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 402 ~vilL~~G~iv~~G~~~~~~ 421 (1436)
++++|++|++++.|+.+++.
T Consensus 206 ~v~~l~~G~i~~~~~~~~~~ 225 (241)
T PRK10895 206 RAYIVSQGHLIAHGTPTEIL 225 (241)
T ss_pred EEEEEeCCeEEeeCCHHHHh
Confidence 99999999999999987653
No 206
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-32 Score=303.77 Aligned_cols=184 Identities=35% Similarity=0.478 Sum_probs=155.8
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc--ccccceEEEeccCCCCCCCCCH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ--ETFTRISGYCEQNDIHSPLVTV 969 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 969 (1436)
+.+|+|+|+.+++| ++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++.+||
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 46999999999999 999999999999999999999865 357999999976532 2345679999999999999999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCC
Q 038815 970 YESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1049 (1436)
Q Consensus 970 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgL 1049 (1436)
+|++.+...++. .+.++..+.++++++.++|.+..++. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 90 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 161 (211)
T cd03264 90 REFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKK-----IGSLSGGMRRRVGIAQALVGDPSILIVDEPTAGL 161 (211)
T ss_pred HHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999988655432 22333355688999999998877765 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1050 DARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1050 D~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|+.+...+.+.|+++++ +.|||+++|++. .+.+..|+
T Consensus 162 D~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~ 198 (211)
T cd03264 162 DPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQ 198 (211)
T ss_pred CHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCE
Confidence 99999999999999876 599999999975 35555666
No 207
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-32 Score=303.73 Aligned_cols=197 Identities=30% Similarity=0.406 Sum_probs=161.1
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC--ccceEEEEcCCCCC
Q 038815 173 TRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE--PQRVAAYISQHDNH 250 (1436)
Q Consensus 173 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~ 250 (1436)
.+..+.++|+|+|+++++| +++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+
T Consensus 8 ~~~~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~ 83 (211)
T cd03264 8 KRYGKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGV 83 (211)
T ss_pred EEECCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcc
Confidence 3334457999999999999 99999999999999999999999987 999999998875432 24578999999999
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVG 330 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 330 (1436)
++.+||+||+.+.....+.. + .+....++.+++.+||++..++.+
T Consensus 84 ~~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 128 (211)
T cd03264 84 YPNFTVREFLDYIAWLKGIP----------S------------------------KEVKARVDEVLELVNLGDRAKKKI- 128 (211)
T ss_pred cccCCHHHHHHHHHHHhCCC----------H------------------------HHHHHHHHHHHHHCCCHHHHhCch-
Confidence 99999999998865432110 0 001123567889999987666544
Q ss_pred CcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 038815 331 DEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 405 (1436)
Q Consensus 331 ~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vil 405 (1436)
..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++ + ++++.++|+.+++.+++|++++
T Consensus 129 ----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~ 201 (211)
T cd03264 129 ----GSLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAV 201 (211)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEE
Confidence 57999999999998776 4999999999999999999999998753 4 5566678888899999999999
Q ss_pred ecCCeEEEec
Q 038815 406 LSDGLIVYLG 415 (1436)
Q Consensus 406 L~~G~iv~~G 415 (1436)
|++|++++.|
T Consensus 202 l~~g~i~~~g 211 (211)
T cd03264 202 LNKGKLVFEG 211 (211)
T ss_pred EECCEEEecC
Confidence 9999998765
No 208
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=4.7e-32 Score=306.16 Aligned_cols=197 Identities=26% Similarity=0.367 Sum_probs=162.0
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.++ ++.+|+|+|+.|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 45667766542 3569999999999999999999999999999999999865 35799999997653
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 038815 947 Q--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQR 1024 (1436)
Q Consensus 947 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1024 (1436)
. ....+.++|++|+..+++..|++|++.+.+..+ ....++..+.++++++.+||.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 2 122357999999988888899999998765443 1233334556889999999987776653 57999999
Q ss_pred HHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1025 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1025 kRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ +|+|||+++|++.. + +..|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~ 201 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDR 201 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCE
Confidence 999999999999999999999999999999999999999985 58999999999864 2 33666
No 209
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-32 Score=317.29 Aligned_cols=204 Identities=26% Similarity=0.296 Sum_probs=165.8
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++++|+++.+.... ...+.+|+|||+.|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67888888764210 012459999999999999999999999999999999999865 35799999998753
Q ss_pred c-------ccccceEEEeccCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 038815 947 Q-------ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVS 1017 (1436)
Q Consensus 947 ~-------~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1017 (1436)
. ..+++.+|||+|++. .+...||+||+.|..... ..+.++..+.++++++.++|. +..+.. ++
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 1 234567999999852 233479999998875432 233444456789999999996 556655 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++.+..|+.
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv 216 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQI 216 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 79999999999999999999999999999999999999999999999765 999999999986 577788883
No 210
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-32 Score=310.41 Aligned_cols=199 Identities=23% Similarity=0.267 Sum_probs=163.3
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCC
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHD 248 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d 248 (1436)
+++..+++++.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++
T Consensus 16 ~~l~~~~~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~ 90 (257)
T PRK11247 16 NAVSKRYGERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDA 90 (257)
T ss_pred EEEEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCc
Confidence 34444555567999999999999999999999999999999999999987 9999999977542 245699999999
Q ss_pred CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccc
Q 038815 249 NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTL 328 (1436)
Q Consensus 249 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 328 (1436)
.+++.+||+||+.++... . ....++.+++.+||++..+.
T Consensus 91 ~l~~~~tv~enl~~~~~~-----------~-----------------------------~~~~~~~~l~~~gl~~~~~~- 129 (257)
T PRK11247 91 RLLPWKKVIDNVGLGLKG-----------Q-----------------------------WRDAALQALAAVGLADRANE- 129 (257)
T ss_pred cCCCCCcHHHHHHhcccc-----------h-----------------------------HHHHHHHHHHHcCChhHhcC-
Confidence 889999999999874210 0 01124567889999875554
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
.+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+..+ .+|+.++|+..++.+++|+|
T Consensus 130 ----~~~~LSgGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~-~tviivsHd~~~~~~~~d~i 204 (257)
T PRK11247 130 ----WPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHG-FTVLLVTHDVSEAVAMADRV 204 (257)
T ss_pred ----ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEE
Confidence 4567999999999998766 5999999999999999999999998765434 45555788888899999999
Q ss_pred EEecCCeEEEecChH
Q 038815 404 ILLSDGLIVYLGPRE 418 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~ 418 (1436)
++|++|++++.|+.+
T Consensus 205 ~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 205 LLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEECCEEEeecccc
Confidence 999999999988654
No 211
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-32 Score=317.08 Aligned_cols=200 Identities=27% Similarity=0.361 Sum_probs=162.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCC-----------------------
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDE----------------------- 234 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~----------------------- 234 (1436)
..+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+...
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999987 8999999876421
Q ss_pred ----CCccceEEEEcCCC-CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHH
Q 038815 235 ----FEPQRVAAYISQHD-NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEAN 309 (1436)
Q Consensus 235 ----~~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (1436)
...++.++||+|++ ..+...||+|||.|+....+.. + .+..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~----------~------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVS----------K------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCC----------H------------------------HHHH
Confidence 01235789999985 3455679999999875433210 0 0112
Q ss_pred HHHHHHHHHcCCc-ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCC
Q 038815 310 VLTDYYLKVLGLD-ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNG 383 (1436)
Q Consensus 310 ~~~~~~l~~lgL~-~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~ 383 (1436)
..++.+++.+||+ +..+ +.+..|||||||||+||+++ +|+|||||+|||+.++..+.+.|+++.+ . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~-----~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQ-----RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhh-----CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 3456789999996 4444 44668999999999998776 4999999999999999999999999864 3 4
Q ss_pred eEEEEEecChhhHHhhcCeEEEecCCeEEEecChHHHH
Q 038815 384 TAVISLLQPAPETYDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 384 t~ii~~~q~~~~~~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
++|+.++|+.+++.+++|+|++|++|++++.|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 55666889999999999999999999999999998864
No 212
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.6e-33 Score=290.39 Aligned_cols=192 Identities=28% Similarity=0.346 Sum_probs=167.0
Q ss_pred cCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccccc----ccceEEEeccCCCCC
Q 038815 889 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQET----FTRISGYCEQNDIHS 964 (1436)
Q Consensus 889 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~d~~~ 964 (1436)
++++++++|||+.+++||+++|+|||||||||.+.++.|... +.+|.|.+||.++.... -+.-+||.||+...|
T Consensus 14 y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 14 YKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred hCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 456789999999999999999999999999999999999876 34799999998765422 233589999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecC
Q 038815 965 PLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1044 (1436)
Q Consensus 965 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDE 1044 (1436)
..+||+||++-....+.. +...+++++.++++|+.+++.++++... ..||||||||+.|||||+.+|+.++|||
T Consensus 92 r~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDE 165 (243)
T COG1137 92 RKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDE 165 (243)
T ss_pred hcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecC
Confidence 999999999876655532 2234566777899999999999999873 4699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhh
Q 038815 1045 PTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1045 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
|++|+|+.+...|.+.++.+++.|.-|++|-|.-. |.....|++
T Consensus 166 PFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRa 209 (243)
T COG1137 166 PFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRA 209 (243)
T ss_pred CccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheE
Confidence 99999999999999999999999999999999865 567778884
No 213
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.8e-32 Score=309.97 Aligned_cols=199 Identities=22% Similarity=0.260 Sum_probs=165.6
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.++ ++.+|+|+|+.+++||+++|+|+||||||||+++|+|..+ +.+|+|.++|...
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 467888877653 3569999999999999999999999999999999999865 3579999999764
Q ss_pred cc----------------ccccceEEEeccCCCCCCCCCHHHHHHHhhh-hcCCCCCCHHHHHHHHHHHHHHcCCCccc-
Q 038815 946 KQ----------------ETFTRISGYCEQNDIHSPLVTVYESLLYSAW-LRLPPEVDSETRKMFIEEIMELVELNPLR- 1007 (1436)
Q Consensus 946 ~~----------------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~-lr~~~~~~~~~~~~~v~~~l~~l~L~~~~- 1007 (1436)
.. ..+++.++|++|++.+++.+||+||+.+... .+ .....+..+.++++++.+|+.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~ 146 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQ 146 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhh
Confidence 21 1345679999999999999999999987542 21 123344556788999999997753
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhh
Q 038815 1008 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFD 1087 (1436)
Q Consensus 1008 ~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD 1087 (1436)
+.. +..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++.|+|||+++|++. ++-+..|
T Consensus 147 ~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d 220 (257)
T PRK10619 147 GKY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSS 220 (257)
T ss_pred hCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcC
Confidence 443 4679999999999999999999999999999999999999999999999877999999999975 4555677
Q ss_pred h
Q 038815 1088 E 1088 (1436)
Q Consensus 1088 ~ 1088 (1436)
+
T Consensus 221 ~ 221 (257)
T PRK10619 221 H 221 (257)
T ss_pred E
Confidence 7
No 214
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=5.7e-32 Score=318.23 Aligned_cols=209 Identities=22% Similarity=0.255 Sum_probs=170.1
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-------cceEEEEcCCC-
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-------QRVAAYISQHD- 248 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 248 (1436)
...+|+|||++|++||+++|+|+||||||||+++|+|.++|+...+|+|.++|.++..... ++.++||+|++
T Consensus 28 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 107 (330)
T PRK09473 28 DVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPM 107 (330)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCch
Confidence 3579999999999999999999999999999999999998742348999999998865432 13699999997
Q ss_pred -CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 249 -NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 249 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
.+.|.+||.+++.+.....+. ..+ .+....+.++++.+||++..+.
T Consensus 108 ~~l~p~~~v~~~i~~~~~~~~~---------~~~------------------------~~~~~~~~~~L~~vgL~~~~~~ 154 (330)
T PRK09473 108 TSLNPYMRVGEQLMEVLMLHKG---------MSK------------------------AEAFEESVRMLDAVKMPEARKR 154 (330)
T ss_pred hhcCCCCCHHHHHHHHHHHhcC---------CCH------------------------HHHHHHHHHHHHHcCCCChHHH
Confidence 688999999999875433210 000 0112235677899999754332
Q ss_pred cccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
-+.++++|||||||||+||+|+ ++++||||+|||..++.++.+.|+++.+. .+++++.++|+...+.+++|+
T Consensus 155 --~~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dr 231 (330)
T PRK09473 155 --MKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDK 231 (330)
T ss_pred --hcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCE
Confidence 2467889999999999998877 49999999999999999999999998764 355666688999999999999
Q ss_pred EEEecCCeEEEecChHHHH
Q 038815 403 IILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~ 421 (1436)
|++|++|++++.|+.+++.
T Consensus 232 i~vm~~G~ive~g~~~~i~ 250 (330)
T PRK09473 232 VLVMYAGRTMEYGNARDVF 250 (330)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999998875
No 215
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-32 Score=309.94 Aligned_cols=191 Identities=22% Similarity=0.259 Sum_probs=162.2
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+. ++.+|+|+|+.|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 588999987653 2469999999999999999999999999999999999865 3579999999764
Q ss_pred ccccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 038815 946 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 1025 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1025 (1436)
. ..++.++|++|+..+++.+||+|++.+... . ...+.++++++.++|.+..+.. +..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~----~-----~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK----G-----QWRDAALQALAAVGLADRANEW-----PAALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc----c-----hHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHH
Confidence 2 345679999999988888999999987421 0 1234578899999998776665 3579999999
Q ss_pred HHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1026 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1026 Rl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ .|+|||+++|++. ++-+..|+
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~ 203 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADR 203 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999865 4899999999986 45666787
No 216
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.7e-32 Score=322.50 Aligned_cols=201 Identities=26% Similarity=0.396 Sum_probs=159.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCCCC
Q 038815 179 TILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGEMT 255 (1436)
Q Consensus 179 ~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 255 (1436)
++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+..+... ++.++||+|++.+|+ -|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-cc
Confidence 6899999999999999999999999999999999999987 9999999999877654 588999999997666 59
Q ss_pred HHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccC
Q 038815 256 VRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIR 335 (1436)
Q Consensus 256 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~r 335 (1436)
+||||.++... ...+...++... ..+.+.+.-+...||.+|+ ..+
T Consensus 411 ireNi~l~~~~-------------------------~s~e~i~~al~~---------a~l~~~v~~p~GLdt~ige-~G~ 455 (559)
T COG4988 411 IRENILLARPD-------------------------ASDEEIIAALDQ---------AGLLEFVPKPDGLDTVIGE-GGA 455 (559)
T ss_pred HHHHhhccCCc-------------------------CCHHHHHHHHHH---------hcHHHhhcCCCcccchhcc-CCC
Confidence 99999986311 000111111000 0112222224566899996 567
Q ss_pred CCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 038815 336 GISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGL 410 (1436)
Q Consensus 336 gLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~ 410 (1436)
+|||||+|||++|||+ ++++||||++||.++...|.+.|.++++ ++|+++. +|. .+...-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~i-tHr-l~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLVI-THR-LEDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEEE-EcC-hHHHhcCCEEEEecCCc
Confidence 9999999999999987 4999999999999999999999999875 4666664 444 34566789999999999
Q ss_pred EEEecChHHHHH
Q 038815 411 IVYLGPRELVLD 422 (1436)
Q Consensus 411 iv~~G~~~~~~~ 422 (1436)
++++|.++++.+
T Consensus 532 l~~~g~~~~L~~ 543 (559)
T COG4988 532 LVEQGTHEELSE 543 (559)
T ss_pred eeccCCHHHHhh
Confidence 999999998853
No 217
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-32 Score=308.77 Aligned_cols=202 Identities=26% Similarity=0.347 Sum_probs=163.3
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCCCC
Q 038815 172 PTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDNHI 251 (1436)
Q Consensus 172 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~ 251 (1436)
..+++++.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ...++|++|++.++
T Consensus 8 ~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~ 82 (255)
T PRK11248 8 YADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLL 82 (255)
T ss_pred EEEeCCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccC
Confidence 33444467999999999999999999999999999999999999887 99999999987542 34589999999889
Q ss_pred CCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccC
Q 038815 252 GEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGD 331 (1436)
Q Consensus 252 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 331 (1436)
+.+||+||+.+.....+.. . .+....++.+++.+||++..+.
T Consensus 83 ~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~---- 124 (255)
T PRK11248 83 PWRNVQDNVAFGLQLAGVE----------K------------------------MQRLEIAHQMLKKVGLEGAEKR---- 124 (255)
T ss_pred CCCcHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhHhhC----
Confidence 9999999998764322110 0 0011235678899999876554
Q ss_pred cccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 038815 332 EMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILL 406 (1436)
Q Consensus 332 ~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL 406 (1436)
.+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++.. +++||.++|+.+++.+++|+|++|
T Consensus 125 -~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l 202 (255)
T PRK11248 125 -YIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQET-GKQVLLITHDIEEAVFMATELVLL 202 (255)
T ss_pred -ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 3457999999999998766 599999999999999999999999875433 445555788888999999999999
Q ss_pred c--CCeEEEecChH
Q 038815 407 S--DGLIVYLGPRE 418 (1436)
Q Consensus 407 ~--~G~iv~~G~~~ 418 (1436)
+ +|+++..++.+
T Consensus 203 ~~~~G~i~~~~~~~ 216 (255)
T PRK11248 203 SPGPGRVVERLPLN 216 (255)
T ss_pred eCCCcEEEEEecCC
Confidence 8 59999987653
No 218
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-32 Score=313.11 Aligned_cols=200 Identities=26% Similarity=0.327 Sum_probs=165.6
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.++ ++..+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 367888877653 12459999999999999999999999999999999999765 3579999999876
Q ss_pred cc---ccccceEEEeccCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 946 KQ---ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
.. ...++.+||++|++. .++..||+|++.|..... ..+.++..+.++++++.++|.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 234567999999863 345689999998864321 2334444566889999999988777763 57999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+..|+
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~ 207 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQ 207 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999999877999999999975 46677888
No 219
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=6.7e-32 Score=303.33 Aligned_cols=202 Identities=25% Similarity=0.362 Sum_probs=164.8
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.++.. .....+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 47888888765311 011359999999999999999999999999999999999865 3579999999865
Q ss_pred cccc------c-cceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 038815 946 KQET------F-TRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSG 1018 (1436)
Q Consensus 946 ~~~~------~-~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1018 (1436)
.... . ++.++|++|+..+++.+||+|++.+....+. .+..+..+.++++++.++|.+..+..+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 3211 1 2579999999988899999999987654331 223344567889999999987766653 57
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1019 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1019 lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||||++||++|+.+|++|+|||||+|||..+...+.+.|++++++ |.|||+++|++.. + +..|+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~ 215 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQL-A-ARCDR 215 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCE
Confidence 9999999999999999999999999999999999999999999998764 8999999999863 3 44565
No 220
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-32 Score=307.79 Aligned_cols=201 Identities=23% Similarity=0.253 Sum_probs=163.8
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEcCe
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSITISGY 943 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~---~~~G~i~i~g~ 943 (1436)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 66778876542 246999999999999999999999999999999999976431 35899999998
Q ss_pred eccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcc----cccccCCCCC
Q 038815 944 LKKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPL----RQSLVGLPGV 1016 (1436)
Q Consensus 944 ~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~~~~ 1016 (1436)
+... ..+++.+||++|++.+++.+||+||+.+....+.. .....+..+.++++++.++|.+. .+.. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 6532 23556799999999888899999999886543211 11223445668899999998642 3333 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1017 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1017 ~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|++. ++.+..|+
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~ 214 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDY 214 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCE
Confidence 68999999999999999999999999999999999999999999999865 899999999986 56677787
No 221
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-32 Score=322.93 Aligned_cols=190 Identities=25% Similarity=0.378 Sum_probs=161.6
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC-------CccceEEEEcCCCCCCCCCC
Q 038815 183 DVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-------EPQRVAAYISQHDNHIGEMT 255 (1436)
Q Consensus 183 ~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 255 (1436)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|+..+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999987 99999999886431 12467999999999999999
Q ss_pred HHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccC
Q 038815 256 VRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIR 335 (1436)
Q Consensus 256 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~r 335 (1436)
|+||+.|+.+.. ....++.+++.+||++..+. .++
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~-----~~~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDR-----YPG 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhC-----Ccc
Confidence 999998853100 01124668899999876654 455
Q ss_pred CCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 038815 336 GISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGL 410 (1436)
Q Consensus 336 gLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~ 410 (1436)
.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+.. +++++.++|+.+++.+++|+|++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREI-NIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 7999999999998776 499999999999999999999999987643 4555668888999999999999999999
Q ss_pred EEEecChHHHH
Q 038815 411 IVYLGPRELVL 421 (1436)
Q Consensus 411 iv~~G~~~~~~ 421 (1436)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999998874
No 222
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-32 Score=281.18 Aligned_cols=181 Identities=28% Similarity=0.401 Sum_probs=162.7
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccccccceEEEeccCCCCCCCCCHHH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQETFTRISGYCEQNDIHSPLVTVYE 971 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 971 (1436)
..+|+|||+.|.+||.++++||||||||||||++||..+ +..|.|.+||+++....- .-|.|+|++.++|-+||.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 459999999999999999999999999999999999887 457999999987754322 2389999999999999999
Q ss_pred HHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCH
Q 038815 972 SLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1051 (1436)
Q Consensus 972 ~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~ 1051 (1436)
|+.|+.++| .+++.+|.+.+.+.+..+||.+..+.. +-.|||||||||-|||||+.+|++|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~-----i~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKY-----IWQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccc-----eEeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999998887 467889999999999999999988776 468999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHH
Q 038815 1052 RAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFE 1084 (1436)
Q Consensus 1052 ~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~ 1084 (1436)
-+.++++++|-++.+ +|+.++++||+-...+|-
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ieEAlfl 199 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIEEALFL 199 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhh
Confidence 999999999998765 699999999997766663
No 223
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=3.5e-32 Score=299.34 Aligned_cols=180 Identities=26% Similarity=0.314 Sum_probs=152.6
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc--ccccceEEEeccCCCCCCCCCH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ--ETFTRISGYCEQNDIHSPLVTV 969 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 969 (1436)
+.+|+|+|+.|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|+..+++.+||
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (201)
T cd03231 13 RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTLSV 90 (201)
T ss_pred ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccccHHhhhheEEeccccccCCCcCH
Confidence 469999999999999999999999999999999999865 357999999976532 2356789999999888889999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCC
Q 038815 970 YESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1049 (1436)
Q Consensus 970 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgL 1049 (1436)
+|++.+.... . ..+.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 91 ~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~L 156 (201)
T cd03231 91 LENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRP-----VAQLSAGQQRRVALARLLLSGRPLWILDEPTTAL 156 (201)
T ss_pred HHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Confidence 9999875311 1 134578899999998877765 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1050 DARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1050 D~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|+.+...+++.|+++.++|+|+|+++|++.. +-+.+|+
T Consensus 157 D~~~~~~l~~~l~~~~~~g~tiii~sH~~~~-~~~~~~~ 194 (201)
T cd03231 157 DKAGVARFAEAMAGHCARGGMVVLTTHQDLG-LSEAGAR 194 (201)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCchh-hhhccce
Confidence 9999999999999988779999999999753 3334443
No 224
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-32 Score=298.18 Aligned_cols=183 Identities=28% Similarity=0.531 Sum_probs=154.9
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEEcCee
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGSITISGYL 944 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~-~~~G~i~i~g~~ 944 (1436)
.++|+|++|.++.+. +++.+|+|+|+.+++||++||+||||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~~---------~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKGR---------SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccCC---------CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 588999999887431 2457999999999999999999999999999999999986532 568999999986
Q ss_pred ccc--ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 038815 945 KKQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTE 1022 (1436)
Q Consensus 945 ~~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1022 (1436)
... ...++.++|++|++.+++.+||+|++.+.+..+ .+.. +..||||
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 542 235667999999999999999999998753211 1222 3579999
Q ss_pred HHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1023 qrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++. +.|+|+++|+...++.+..|+
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~ 189 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDK 189 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCe
Confidence 999999999999999999999999999999999999999999765 678888888877788888887
No 225
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=5.4e-32 Score=307.76 Aligned_cols=199 Identities=24% Similarity=0.306 Sum_probs=162.7
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEcCe
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSITISGY 943 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~---~~~G~i~i~g~ 943 (1436)
++++|+++.+. +..+|+|+|+.+++||+++|+|+|||||||||++|+|...+. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 45677776542 246999999999999999999999999999999999976531 12799999998
Q ss_pred eccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC----cccccccCCC
Q 038815 944 LKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN----PLRQSLVGLP 1014 (1436)
Q Consensus 944 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~~ 1014 (1436)
+... ...++.+||++|+..+++ .|++||+.+....+. ..+.++..+.++++++.+||. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7532 234567999999988888 999999988654431 122344456788999999997 444443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1015 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1015 ~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..||||||||++||++|+.+|++|+|||||+|||+.+...+++.|+++++ ++|||+++|++. ++.+..|+
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~ 212 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDR 212 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCE
Confidence 467999999999999999999999999999999999999999999999877 589999999975 56667787
No 226
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-32 Score=316.62 Aligned_cols=211 Identities=26% Similarity=0.420 Sum_probs=167.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC-------------------Ccc
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-------------------EPQ 238 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------------------~~~ 238 (1436)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 46999999999999999999999999999999999999987 99999999886432 124
Q ss_pred ceEEEEcCCC--CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHH
Q 038815 239 RVAAYISQHD--NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYL 316 (1436)
Q Consensus 239 ~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 316 (1436)
+.++||+|++ .+++ .||+||+.|+....+.. . .+....++.++
T Consensus 116 ~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l 160 (320)
T PRK13631 116 RRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVK----------K------------------------SEAKKLAKFYL 160 (320)
T ss_pred hcEEEEEECchhcccc-chHHHHHHhhHHhcCCC----------H------------------------HHHHHHHHHHH
Confidence 6799999986 3554 59999998864322110 0 01122356788
Q ss_pred HHcCCc-ccccccccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEe
Q 038815 317 KVLGLD-ICADTLVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLL 390 (1436)
Q Consensus 317 ~~lgL~-~~~~t~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~ 390 (1436)
+.+||+ +..+ +.+..|||||||||+||++++ |+|||||+|||+.++.++.+.|+++.. . +++|+.++
T Consensus 161 ~~~gL~~~~~~-----~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~-g~Tiiivt 233 (320)
T PRK13631 161 NKMGLDDSYLE-----RSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-N-NKTVFVIT 233 (320)
T ss_pred HHcCCChhHhc-----CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEe
Confidence 999996 3333 445689999999999988774 999999999999999999999998754 3 45566678
Q ss_pred cChhhHHhhcCeEEEecCCeEEEecChHHHH---HHHHhcCCCCCC
Q 038815 391 QPAPETYDLFDDIILLSDGLIVYLGPRELVL---DFFESMGFKCPE 433 (1436)
Q Consensus 391 q~~~~~~~lfD~vilL~~G~iv~~G~~~~~~---~~F~~lGf~cp~ 433 (1436)
|+.+++.+++|+|++|++|++++.|+++++. ..++..|..+|.
T Consensus 234 Hd~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 234 HTMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred cCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 8888899999999999999999999998764 234455555544
No 227
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.1e-32 Score=300.24 Aligned_cols=186 Identities=29% Similarity=0.394 Sum_probs=156.4
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++++|++..+. ++.+|+|+|+.|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 56677765542 3469999999999999999999999999999999999765 35799999997643
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 038815 947 QETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKR 1026 (1436)
Q Consensus 947 ~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkR 1026 (1436)
....++.++|++|++.+++..||+|++.+....+. .. .+.++++++.+||.+..+.. ++.||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLP-----FGYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCC-----hhhcCHHHHHH
Confidence 22256678999999888888999999987554321 11 13478899999998766655 35799999999
Q ss_pred HHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCC
Q 038815 1027 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPS 1079 (1436)
Q Consensus 1027 l~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps 1079 (1436)
++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~ 188 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL 188 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 99999999999999999999999999999999999998878999999999975
No 228
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.7e-32 Score=304.98 Aligned_cols=203 Identities=26% Similarity=0.324 Sum_probs=162.2
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc----cceEEEEcCC
Q 038815 172 PTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP----QRVAAYISQH 247 (1436)
Q Consensus 172 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~ 247 (1436)
..+++++++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|+
T Consensus 7 ~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~ 83 (230)
T TIGR03410 7 NVYYGQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQG 83 (230)
T ss_pred EEEeCCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccC
Confidence 33344557999999999999999999999999999999999999987 9999999988754332 3468999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcC-Cccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLG-LDICAD 326 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~~ 326 (1436)
+.+++.+||+||+.++....+.. . ....+.+++.++ +++..+
T Consensus 84 ~~~~~~~tv~~~l~~~~~~~~~~----------~---------------------------~~~~~~~l~~~~~l~~~~~ 126 (230)
T TIGR03410 84 REIFPRLTVEENLLTGLAALPRR----------S---------------------------RKIPDEIYELFPVLKEMLG 126 (230)
T ss_pred CcccCCCcHHHHHHHHHHhcCcc----------h---------------------------HHHHHHHHHHHHhHHHHhh
Confidence 99999999999998864322100 0 001234455555 443333
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
..++.|||||||||+||+++ +++|||||+|||+.++.++.+.|+++++. ++++++.++|+.+++.+++|
T Consensus 127 -----~~~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d 200 (230)
T TIGR03410 127 -----RRGGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELAD 200 (230)
T ss_pred -----CChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCC
Confidence 44567999999999998766 59999999999999999999999987653 24555567888889999999
Q ss_pred eEEEecCCeEEEecChHHH
Q 038815 402 DIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 402 ~vilL~~G~iv~~G~~~~~ 420 (1436)
+|++|++|++++.|+.+++
T Consensus 201 ~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 201 RYYVMERGRVVASGAGDEL 219 (230)
T ss_pred EEEEEECCEEEEECCHHHc
Confidence 9999999999999998765
No 229
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-32 Score=318.12 Aligned_cols=203 Identities=25% Similarity=0.335 Sum_probs=165.6
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 588999998764210 012459999999999999999999999999999999999865 4579999999764
Q ss_pred cc-------------------ccccceEEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC
Q 038815 946 KQ-------------------ETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN 1004 (1436)
Q Consensus 946 ~~-------------------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~ 1004 (1436)
.. ...++.+|||+|++ .+++ .||+||+.|..... ..+.++..++++++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 23467899999986 3554 59999998864321 233444456788999999996
Q ss_pred -cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHH
Q 038815 1005 -PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIF 1083 (1436)
Q Consensus 1005 -~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if 1083 (1436)
+..+.. +..|||||||||+|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455544 4679999999999999999999999999999999999999999999998877999999999975 466
Q ss_pred HHhhh
Q 038815 1084 ESFDE 1088 (1436)
Q Consensus 1084 ~~FD~ 1088 (1436)
+..|+
T Consensus 241 ~~adr 245 (320)
T PRK13631 241 EVADE 245 (320)
T ss_pred HhCCE
Confidence 77888
No 230
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=9.1e-32 Score=303.54 Aligned_cols=199 Identities=26% Similarity=0.306 Sum_probs=160.3
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC--CccceEEEEc-CCCCC
Q 038815 174 RKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF--EPQRVAAYIS-QHDNH 250 (1436)
Q Consensus 174 ~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~-Q~d~~ 250 (1436)
++..+++|+|+|+.|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.+.... ..++.++|++ |++.+
T Consensus 30 ~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 106 (236)
T cd03267 30 KYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQL 106 (236)
T ss_pred ccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCcccc
Confidence 345567999999999999999999999999999999999999987 99999999875332 1235789997 55677
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVG 330 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 330 (1436)
++.+||+|++.+.....+.. . ++....++.+++.+||++..++.+
T Consensus 107 ~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 151 (236)
T cd03267 107 WWDLPVIDSFYLLAAIYDLP----------P------------------------ARFKKRLDELSELLDLEELLDTPV- 151 (236)
T ss_pred CCCCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhHhcCCh-
Confidence 88999999998864432110 0 001123456788999988777665
Q ss_pred CcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 038815 331 DEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 405 (1436)
Q Consensus 331 ~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vil 405 (1436)
..||||||||++||+++ +++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++
T Consensus 152 ----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiivsH~~~~~~~~~d~i~~ 226 (236)
T cd03267 152 ----RQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRER-GTTVLLTSHYMKDIEALARRVLV 226 (236)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcC-CCEEEEEecCHHHHHHhCCEEEE
Confidence 46999999999998766 599999999999999999999999986533 44555578888889999999999
Q ss_pred ecCCeEEEec
Q 038815 406 LSDGLIVYLG 415 (1436)
Q Consensus 406 L~~G~iv~~G 415 (1436)
|++|++++.|
T Consensus 227 l~~G~i~~~g 236 (236)
T cd03267 227 IDKGRLLYDG 236 (236)
T ss_pred EeCCEEEecC
Confidence 9999998765
No 231
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-32 Score=311.43 Aligned_cols=211 Identities=27% Similarity=0.386 Sum_probs=168.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCC-CCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDN-HIGE 253 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 253 (1436)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 56999999999999999999999999999999999999987 9999999998765332 357999999973 6777
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM 333 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 333 (1436)
+||.|||.++.+..+.. . .+....++.+++.+||++..++.
T Consensus 97 ~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~----- 137 (279)
T PRK13635 97 ATVQDDVAFGLENIGVP----------R------------------------EEMVERVDQALRQVGMEDFLNRE----- 137 (279)
T ss_pred ccHHHHHhhhHhhCCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCC-----
Confidence 89999998864332110 0 01122357789999998766654
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
++.|||||||||+||+++ +++|||||+|||+.++..+.+.|++++... +++|+.++|+.+++. .+|+|++|++
T Consensus 138 ~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~-~~tilivsH~~~~~~-~~d~i~~l~~ 215 (279)
T PRK13635 138 PHRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQK-GITVLSITHDLDEAA-QADRVIVMNK 215 (279)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcC-CCEEEEEecCHHHHH-cCCEEEEEEC
Confidence 457999999999998766 599999999999999999999999986533 455555677777776 5999999999
Q ss_pred CeEEEecChHHHHH---HHHhcCCCCC
Q 038815 409 GLIVYLGPRELVLD---FFESMGFKCP 432 (1436)
Q Consensus 409 G~iv~~G~~~~~~~---~F~~lGf~cp 432 (1436)
|++++.|+.+++.. .+...|..+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999887653 3444455444
No 232
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-32 Score=313.87 Aligned_cols=201 Identities=24% Similarity=0.305 Sum_probs=167.4
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.++.. +.+.+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 36788888776411 12459999999999999999999999999999999999865 3579999999876
Q ss_pred cc---ccccceEEEeccCC-CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 946 KQ---ETFTRISGYCEQND-IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
.. ...++.+||++|++ ..++..||+||+.|..... ..+.++..+.++++++.+||.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 32 23456799999996 3567789999998864332 2344555667899999999988777663 57999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||++||++|+.+|++|+|||||+|||+.+...+++.|++++++ |+|||+++|++.. + +..|+
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~-~-~~~dr 209 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDE-V-ALSDR 209 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCE
Confidence 9999999999999999999999999999999999999999999875 9999999999864 4 56887
No 233
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=6.9e-32 Score=306.02 Aligned_cols=198 Identities=24% Similarity=0.316 Sum_probs=163.8
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+. ++.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 56778776543 2469999999999999999999999999999999999865 35799999998642
Q ss_pred ---------cccccceEEEeccCCCCCCCCCHHHHHHHh-hhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 038815 947 ---------QETFTRISGYCEQNDIHSPLVTVYESLLYS-AWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGV 1016 (1436)
Q Consensus 947 ---------~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~-a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1016 (1436)
....++.++|++|+..+++.+||+|++.+. ...+ ....++..+.++++++.+||.+..+.. +
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~ 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRF-----P 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----h
Confidence 012356799999999999999999999753 2221 122333455688999999998777765 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1017 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1017 ~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
..||||||||++||++|+.+|++|+|||||+|||..+...+.+.|+++.++|+|||+++|++. ++-+..|+
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~ 210 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASR 210 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCE
Confidence 579999999999999999999999999999999999999999999999877999999999985 45566777
No 234
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=6.2e-32 Score=305.41 Aligned_cols=206 Identities=25% Similarity=0.360 Sum_probs=163.2
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc----cceEEEEc
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP----QRVAAYIS 245 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~ 245 (1436)
++..+++.+.+|+|+|+.|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++
T Consensus 10 ~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~ 86 (237)
T PRK11614 10 KVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVP 86 (237)
T ss_pred eEEEeeCCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEec
Confidence 3444445567999999999999999999999999999999999999987 9999999998765432 35699999
Q ss_pred CCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHc-CCccc
Q 038815 246 QHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVL-GLDIC 324 (1436)
Q Consensus 246 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~ 324 (1436)
|++.+++.+||+||+.++..... .++ ....++.+++.+ ++.+.
T Consensus 87 q~~~~~~~~tv~~~l~~~~~~~~------------~~~------------------------~~~~~~~~l~~~~~l~~~ 130 (237)
T PRK11614 87 EGRRVFSRMTVEENLAMGGFFAE------------RDQ------------------------FQERIKWVYELFPRLHER 130 (237)
T ss_pred cCcccCCCCcHHHHHHHhhhccC------------hhH------------------------HHHHHHHHHHHHHHHHHH
Confidence 99999999999999987532110 000 001123445555 35543
Q ss_pred ccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 038815 325 ADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDL 399 (1436)
Q Consensus 325 ~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~l 399 (1436)
.++ .++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ .+. +||.++|+.+++.++
T Consensus 131 ~~~-----~~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~-tiii~sH~~~~~~~~ 203 (237)
T PRK11614 131 RIQ-----RAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QGM-TIFLVEQNANQALKL 203 (237)
T ss_pred HhC-----chhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CCC-EEEEEeCcHHHHHhh
Confidence 333 3457999999999998766 5999999999999999999999998764 344 455578888899999
Q ss_pred cCeEEEecCCeEEEecChHHHH
Q 038815 400 FDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 400 fD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+|++++|++|++++.|+++++.
T Consensus 204 ~d~i~~l~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 204 ADRGYVLENGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEEEeCCEEEeeCCHHHHh
Confidence 9999999999999999988763
No 235
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=6.6e-32 Score=313.18 Aligned_cols=203 Identities=25% Similarity=0.329 Sum_probs=165.7
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.++... ...+.+|+|||+.|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 56788888764110 011359999999999999999999999999999999999865 45799999998753
Q ss_pred c-------ccccceEEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 038815 947 Q-------ETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGV 1016 (1436)
Q Consensus 947 ~-------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 1016 (1436)
. ..+++.+|||+|++ .+++ .||.|++.|..... ..+.++..+++.++++.++|. +..+.. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 23567899999986 3444 69999999875432 234455667789999999996 455554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhh
Q 038815 1017 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1017 ~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|++. ++.+..|+.
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri 214 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYV 214 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEE
Confidence 689999999999999999999999999999999999999999999999877999999999984 567778883
No 236
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=8.4e-32 Score=316.56 Aligned_cols=208 Identities=20% Similarity=0.230 Sum_probs=167.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcccEEEEcCccCCCCCc-------cceEEEEcCCC-
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSL-KVSGRVTYNGHNMDEFEP-------QRVAAYISQHD- 248 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~-~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 248 (1436)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 579999999999999999999999999999999999987422 238999999998765432 13699999997
Q ss_pred -CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 249 -NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 249 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
.+.|.+||.+++....+.... ..+ .+....++.+++.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~---------~~~------------------------~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQG---------GNK------------------------KTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcC---------CCH------------------------HHHHHHHHHHHHHCCCCChHH-
Confidence 478999999998765432210 000 112234677899999975321
Q ss_pred cccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
+-+..++.|||||||||+||+|++ |++||||+|||..++.++++.|+++.+.. +++++.++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~-g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKE-NMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCE
Confidence 124567789999999999988774 99999999999999999999999987643 45666688999999999999
Q ss_pred EEEecCCeEEEecChHHHH
Q 038815 403 IILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~ 421 (1436)
|++|++|++++.|+.+++.
T Consensus 224 i~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998875
No 237
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=99.98 E-value=6.9e-32 Score=307.81 Aligned_cols=198 Identities=23% Similarity=0.294 Sum_probs=164.5
Q ss_pred EEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc
Q 038815 868 TFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ 947 (1436)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~ 947 (1436)
+++|+++.+. ++.+|+|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 66 (252)
T TIGR03005 2 RFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLYH 66 (252)
T ss_pred EEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5677776542 2469999999999999999999999999999999999865 357999999976531
Q ss_pred ----------------ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCccccccc
Q 038815 948 ----------------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLV 1011 (1436)
Q Consensus 948 ----------------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~v 1011 (1436)
...++.++|++|+..+++..||.||+.+..... ......+..+.++++++.+|+.+..+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~- 143 (252)
T TIGR03005 67 MPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM- 143 (252)
T ss_pred cccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC-
Confidence 124567999999999999999999998753211 1123344456788999999998777665
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1012 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1012 g~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++....|+
T Consensus 144 ----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~ 216 (252)
T TIGR03005 144 ----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADR 216 (252)
T ss_pred ----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCE
Confidence 3679999999999999999999999999999999999999999999998875 899999999985 46667777
No 238
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=7.9e-32 Score=311.91 Aligned_cols=209 Identities=25% Similarity=0.334 Sum_probs=167.1
Q ss_pred ccccccc-cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCC--C---CccceEEE
Q 038815 170 ILPTRKK-HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDE--F---EPQRVAAY 243 (1436)
Q Consensus 170 ~~~~~~~-~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~--~---~~~~~~~y 243 (1436)
++..+++ ++.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|
T Consensus 10 ~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~ 86 (283)
T PRK13636 10 ELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGM 86 (283)
T ss_pred eEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEE
Confidence 3444443 457999999999999999999999999999999999999987 9999999998741 1 12357999
Q ss_pred EcCCCC-CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 244 ISQHDN-HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 244 v~Q~d~-~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
++|++. .+...||+||+.++....+.. . .+....++.+++.+||.
T Consensus 87 v~q~~~~~~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~ 132 (283)
T PRK13636 87 VFQDPDNQLFSASVYQDVSFGAVNLKLP----------E------------------------DEVRKRVDNALKRTGIE 132 (283)
T ss_pred EecCcchhhccccHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCh
Confidence 999863 345689999998864322110 0 01122356788999998
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
+..++ .++.||||||||++||+++ +|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.
T Consensus 133 ~~~~~-----~~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tillvsH~~~~~~ 206 (283)
T PRK13636 133 HLKDK-----PTHCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKEL-GLTIIIATHDIDIVP 206 (283)
T ss_pred hhhhC-----CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecCHHHHH
Confidence 76554 4567999999999998776 599999999999999999999999986533 445555788888999
Q ss_pred hhcCeEEEecCCeEEEecChHHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
++||++++|++|++++.|+.+++.
T Consensus 207 ~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 207 LYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred HhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999998765
No 239
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=5.3e-32 Score=313.79 Aligned_cols=203 Identities=22% Similarity=0.329 Sum_probs=165.4
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 367888887764110 012459999999999999999999999999999999999865 3579999999875
Q ss_pred cc-------ccccceEEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCC
Q 038815 946 KQ-------ETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPG 1015 (1436)
Q Consensus 946 ~~-------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 1015 (1436)
.. ..+++.+|||+|++ .+++ .||+|++.|..... ..+.++..+.++++++.+||. +..++.
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~----- 142 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS----- 142 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----
Confidence 32 13567899999985 3444 59999998864332 234445566789999999996 566654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|++. ++.+..|+
T Consensus 143 ~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dr 215 (286)
T PRK13646 143 PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADE 215 (286)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCE
Confidence 467999999999999999999999999999999999999999999999976 4899999999975 46677888
No 240
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=99.98 E-value=5.4e-32 Score=301.16 Aligned_cols=190 Identities=26% Similarity=0.377 Sum_probs=156.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC------ccceEEEEcCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE------PQRVAAYISQHDNHI 251 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 251 (1436)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 56999999999999999999999999999999999999887 999999999875432 235699999999999
Q ss_pred CCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccC
Q 038815 252 GEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGD 331 (1436)
Q Consensus 252 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 331 (1436)
+.+||+||+.+.....+.. . .+....++.+++.+||++..++.
T Consensus 91 ~~~t~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~--- 133 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP----------P------------------------REIRKRVPAALELVGLSHKHRAL--- 133 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHHHhhCC---
Confidence 9999999998865432110 0 00112346688899998766554
Q ss_pred cccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 038815 332 EMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILL 406 (1436)
Q Consensus 332 ~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL 406 (1436)
++.||||||||++||+++ +++|||||+|||+.++..+.+.|+++.+ . +++++.++|+.+++.+++|++++|
T Consensus 134 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 134 --PAELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-A-GTTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred --hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 457999999999998776 4999999999999999999999999754 3 445666788888999999999999
Q ss_pred cCCeE
Q 038815 407 SDGLI 411 (1436)
Q Consensus 407 ~~G~i 411 (1436)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 241
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=99.98 E-value=7.9e-32 Score=302.28 Aligned_cols=199 Identities=35% Similarity=0.555 Sum_probs=157.9
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCcccEEEEcCccCCCCCccceEEEEcCCCCCCCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLD---SSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDNHIGE 253 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~---~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 253 (1436)
.+++|+|+|+++++||+++|+||||||||||+|+|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3679999999999999999999999999999999999998 65 99999999887543345679999999999999
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHH-HHHHcCCcccccccccCc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDY-YLKVLGLDICADTLVGDE 332 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~~t~vg~~ 332 (1436)
+||+||+.|+......... .+. ......+. .++.+++++..+ .
T Consensus 96 ~tv~enl~~~~~~~~~~~~-------~~~------------------------~~~~~~~~~~l~~~~l~~~~~-----~ 139 (226)
T cd03234 96 LTVRETLTYTAILRLPRKS-------SDA------------------------IRKKRVEDVLLRDLALTRIGG-----N 139 (226)
T ss_pred CcHHHHHHHHHHhhccccc-------chH------------------------HHHHHHHHHHHHhhcchhhhc-----c
Confidence 9999999987543321000 000 00011233 678888876544 3
Q ss_pred ccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
.++.|||||||||+||+++ +++|||||+|||+.++..+.+.+++..+ .+.|++++.|++..++.+++|++++|+
T Consensus 140 ~~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~tiii~sh~~~~~~~~~~d~i~~l~ 218 (226)
T cd03234 140 LVKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRIVILTIHQPRSDLFRLFDRILLLS 218 (226)
T ss_pred cccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCCCHHHHHhCCEEEEEe
Confidence 4567999999999997765 5999999999999999999999998764 355666654444468999999999999
Q ss_pred CCeEEEec
Q 038815 408 DGLIVYLG 415 (1436)
Q Consensus 408 ~G~iv~~G 415 (1436)
+|+++++|
T Consensus 219 ~G~i~~~g 226 (226)
T cd03234 219 SGEIVYSG 226 (226)
T ss_pred CCEEEecC
Confidence 99999876
No 242
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=99.98 E-value=6.2e-32 Score=300.65 Aligned_cols=190 Identities=29% Similarity=0.402 Sum_probs=155.7
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC------ccceEEEEcCCCCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE------PQRVAAYISQHDNH 250 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~ 250 (1436)
++.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+
T Consensus 14 ~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~ 90 (214)
T TIGR02673 14 GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRL 90 (214)
T ss_pred CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhh
Confidence 457999999999999999999999999999999999999887 999999999876532 23568999999988
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVG 330 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 330 (1436)
++.+||+||+.++....+.. . ...+..++.+++.+||++..++.
T Consensus 91 ~~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-- 134 (214)
T TIGR02673 91 LPDRTVYENVALPLEVRGKK----------E------------------------REIQRRVGAALRQVGLEHKADAF-- 134 (214)
T ss_pred ccCCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCC--
Confidence 99999999999865432110 0 00112356788999997655544
Q ss_pred CcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 038815 331 DEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 405 (1436)
Q Consensus 331 ~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vil 405 (1436)
+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ .+ ++++.++|..+++.+++|++++
T Consensus 135 ---~~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~i~~ 209 (214)
T TIGR02673 135 ---PEQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RG-TTVIVATHDLSLVDRVAHRVII 209 (214)
T ss_pred ---hhhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCEEEE
Confidence 457999999999998766 5999999999999999999999999754 34 4555577888899999999999
Q ss_pred ecCCe
Q 038815 406 LSDGL 410 (1436)
Q Consensus 406 L~~G~ 410 (1436)
|++|+
T Consensus 210 l~~G~ 214 (214)
T TIGR02673 210 LDDGR 214 (214)
T ss_pred ecCCC
Confidence 99985
No 243
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=99.98 E-value=9.7e-32 Score=302.07 Aligned_cols=196 Identities=27% Similarity=0.345 Sum_probs=155.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC------ccceEEEEcCCC--CC
Q 038815 179 TILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE------PQRVAAYISQHD--NH 250 (1436)
Q Consensus 179 ~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 250 (1436)
++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999999887 999999999876533 235799999998 46
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc-ccccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD-ICADTLV 329 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~v 329 (1436)
++.+||+||+.+.....+... .+ .......+.+++.+||. ...+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~----------~~----------------------~~~~~~~~~~l~~~~l~~~~~~--- 140 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLS----------KK----------------------EARKEAVLLLLVGVGLPEEVLN--- 140 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCc----------HH----------------------HHHHHHHHHHHHHCCCChhHhh---
Confidence 678999999988643321100 00 00011124578888985 3444
Q ss_pred cCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 038815 330 GDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDII 404 (1436)
Q Consensus 330 g~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vi 404 (1436)
..+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|+
T Consensus 141 --~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 141 --RYPHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELG-LTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred --CCchhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEE
Confidence 34557999999999998766 5999999999999999999999999865324 455557788888889999999
Q ss_pred EecCCeEEEec
Q 038815 405 LLSDGLIVYLG 415 (1436)
Q Consensus 405 lL~~G~iv~~G 415 (1436)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 244
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.98 E-value=3.3e-32 Score=273.28 Aligned_cols=180 Identities=26% Similarity=0.374 Sum_probs=154.8
Q ss_pred CceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc---c---c-ccceEEEeccCCC
Q 038815 890 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ---E---T-FTRISGYCEQNDI 962 (1436)
Q Consensus 890 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~---~---~-~~~~~gyv~Q~d~ 962 (1436)
+...||++|++.|++||-+||+|||||||||||-+|+|... +.+|+|.+.|.+... + . ..+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 45789999999999999999999999999999999999876 357999999987532 1 2 3468999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 038815 963 HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1042 (1436)
Q Consensus 963 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~l 1042 (1436)
+.|++|-.||+.....++..... .-.....+.|+.+||.+-.+-. +.+|||||+|||+||||++..|+|||.
T Consensus 99 Lip~ltAlENV~lPleL~ge~~~---~~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESSA---DSRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCccc---cHHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEEec
Confidence 99999999999988777653222 2233467889999998766554 468999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCC
Q 038815 1043 DEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPS 1079 (1436)
Q Consensus 1043 DEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps 1079 (1436)
||||-+||.++...|.++|-.+.+ .|.|.|+++|||+
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~ 208 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ 208 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH
Confidence 999999999999999999988865 5999999999986
No 245
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=99.98 E-value=8.7e-32 Score=320.48 Aligned_cols=194 Identities=25% Similarity=0.397 Sum_probs=162.2
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC-------CccceEEEEcCCCCCCCCCC
Q 038815 183 DVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-------EPQRVAAYISQHDNHIGEMT 255 (1436)
Q Consensus 183 ~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 255 (1436)
|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 999999999999999999999999999999999987 99999999887432 12467999999999999999
Q ss_pred HHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccC
Q 038815 256 VRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIR 335 (1436)
Q Consensus 256 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~r 335 (1436)
|+||+.|+.+... .. +....++.+++.+||++..+.. +.
T Consensus 92 v~enl~~~~~~~~------------~~------------------------~~~~~~~~~l~~~gL~~~~~~~-----~~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR------------PS------------------------ERRISFERVIELLGIGHLLGRL-----PG 130 (354)
T ss_pred HHHHHHHHhhccC------------hh------------------------HHHHHHHHHHHHcCChhHhcCC-----hh
Confidence 9999998643110 00 0112356788999998766644 45
Q ss_pred CCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 038815 336 GISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGL 410 (1436)
Q Consensus 336 gLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~ 410 (1436)
.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+..+ ++++.++|+.+++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFG-IPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 7999999999998776 4999999999999999999999999876434 455567888899999999999999999
Q ss_pred EEEecChHHHH
Q 038815 411 IVYLGPRELVL 421 (1436)
Q Consensus 411 iv~~G~~~~~~ 421 (1436)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988764
No 246
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=99.98 E-value=8.5e-32 Score=296.17 Aligned_cols=185 Identities=25% Similarity=0.334 Sum_probs=156.2
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+. ++.+|+|+|+.+++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~ 66 (200)
T PRK13540 2 LDVIELDFDYH-------------DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLN--PEKGEILFERQSIK 66 (200)
T ss_pred EEEEEEEEEeC-------------CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeeEEECCCccc
Confidence 45677776542 3569999999999999999999999999999999999865 35799999997653
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 038815 947 Q--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQR 1024 (1436)
Q Consensus 947 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1024 (1436)
. ..+++.++|++|+..+++..||+|++.+.... .. . ...++++++.+++.+..+..+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~~~~~~~~--~~----~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 133 (200)
T PRK13540 67 KDLCTYQKQLCFVGHRSGINPYLTLRENCLYDIHF--SP----G--AVGITELCRLFSLEHLIDYPC-----GLLSSGQK 133 (200)
T ss_pred cCHHHHHhheEEeccccccCcCCCHHHHHHHHHhc--Cc----c--hHHHHHHHHHcCCchhhhCCh-----hhcCHHHH
Confidence 2 23567899999998888889999999876421 11 1 235788999999987666553 57999999
Q ss_pred HHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCC
Q 038815 1025 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPS 1079 (1436)
Q Consensus 1025 kRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps 1079 (1436)
||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++.|+|||+++|++.
T Consensus 134 ~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~ 188 (200)
T PRK13540 134 RQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDL 188 (200)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCch
Confidence 9999999999999999999999999999999999999998777999999999975
No 247
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=9.6e-32 Score=306.90 Aligned_cols=206 Identities=23% Similarity=0.223 Sum_probs=163.8
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~---~~~G~i~i~g 942 (1436)
.++++|+++.+. ++.+|+|+|+.+++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 367788877653 246999999999999999999999999999999999986532 3589999999
Q ss_pred eecc-----cccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 038815 943 YLKK-----QETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVS 1017 (1436)
Q Consensus 943 ~~~~-----~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1017 (1436)
.+.. ...+++.++|++|++.+++.+||.||+.+....+.. ..+.++..+.++++++.+++.+....... ..+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 148 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLN-DYPS 148 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhc-cChh
Confidence 8653 123456799999999999999999999886543211 11233344567889999998532111111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 149 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~ 217 (253)
T PRK14267 149 NLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDY 217 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCE
Confidence 8999999999999999999999999999999999999999999999865 799999999975 46667787
No 248
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=99.98 E-value=8.7e-32 Score=305.46 Aligned_cols=192 Identities=23% Similarity=0.235 Sum_probs=153.8
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc---cc-cceEEEeccCCCCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE---TF-TRISGYCEQNDIHSPLV 967 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~---~~-~~~~gyv~Q~d~~~~~l 967 (1436)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.....+.+|+|.++|.+.... .. +..++|++|++.+++.+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQYPEEIPGV 92 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeeccccccCCc
Confidence 569999999999999999999999999999999999741124579999999865321 12 23489999999999999
Q ss_pred CHHHHHHHhhhhcCCC----CCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 038815 968 TVYESLLYSAWLRLPP----EVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1042 (1436)
Q Consensus 968 Tv~E~l~f~a~lr~~~----~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~l 1042 (1436)
|++|++.+........ ..+.++..+.++++++.++|. +..+..++ ..|||||||||+||++|+.+|++|+|
T Consensus 93 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrl~la~al~~~p~llll 168 (243)
T TIGR01978 93 SNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EGFSGGEKKRNEILQMALLEPKLAIL 168 (243)
T ss_pred CHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cCcCHHHHHHHHHHHHHhcCCCEEEe
Confidence 9999998764322110 112233345688999999997 45555431 24999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHH-hhh
Q 038815 1043 DEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFES-FDE 1088 (1436)
Q Consensus 1043 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~-FD~ 1088 (1436)
||||+|||+.++..+++.|++++++|+|||+++|+++ .+.+. .|+
T Consensus 169 DEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~ 214 (243)
T TIGR01978 169 DEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDY 214 (243)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCe
Confidence 9999999999999999999999877899999999975 34444 476
No 249
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=99.98 E-value=1.1e-31 Score=305.33 Aligned_cols=208 Identities=25% Similarity=0.384 Sum_probs=165.3
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCC-----CccceEEEE
Q 038815 172 PTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----EPQRVAAYI 244 (1436)
Q Consensus 172 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv 244 (1436)
..+++...+|+|+|++|++||+++|+|||||||||||++|+|.++|+ .+.+|+|+++|.++... ..++.++|+
T Consensus 8 ~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v 87 (247)
T TIGR00972 8 NLFYGEKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMV 87 (247)
T ss_pred EEEECCeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEE
Confidence 33444456999999999999999999999999999999999999763 22389999999987542 124579999
Q ss_pred cCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc--
Q 038815 245 SQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD-- 322 (1436)
Q Consensus 245 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-- 322 (1436)
+|++.+++ +||+||+.+..+.++... . .+....++.+++.+||.
T Consensus 88 ~q~~~~~~-~tv~e~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~ 133 (247)
T TIGR00972 88 FQKPNPFP-MSIYDNIAYGPRLHGIKD---------K------------------------KELDEIVEESLKKAALWDE 133 (247)
T ss_pred ecCcccCC-CCHHHHHHhHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCCcc
Confidence 99988888 999999988654321000 0 00112356678999997
Q ss_pred --ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhh
Q 038815 323 --ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPE 395 (1436)
Q Consensus 323 --~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~ 395 (1436)
+..+ ..++.|||||||||+||+++ +++|||||+|||+.+...+.+.|+++.+ + .+++.++|+..+
T Consensus 134 ~~~~~~-----~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~ 205 (247)
T TIGR00972 134 VKDRLH-----DSALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQ 205 (247)
T ss_pred hhhHhh-----CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHH
Confidence 4444 34567999999999998766 5999999999999999999999998754 3 455667888889
Q ss_pred HHhhcCeEEEecCCeEEEecChHHHH
Q 038815 396 TYDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 396 ~~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+.+++|+|++|++|++++.|+.+++.
T Consensus 206 ~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 206 AARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999987753
No 250
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=5.4e-32 Score=305.87 Aligned_cols=197 Identities=24% Similarity=0.340 Sum_probs=161.9
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.+. .+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 367888877652 2469999999999999999999999999999999999865 3579999999865
Q ss_pred ccc----cccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHc-CCCcccccccCCCCCCCCC
Q 038815 946 KQE----TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELV-ELNPLRQSLVGLPGVSGLS 1020 (1436)
Q Consensus 946 ~~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~lS 1020 (1436)
... ..++.++|++|+..+++.+||+||+.+..... ..++..+.++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 321 23567999999998899899999998754221 1122334567778887 476555543 35799
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 206 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADR 206 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCE
Confidence 99999999999999999999999999999999999999999999877999999999974 56677787
No 251
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.98 E-value=1.1e-31 Score=304.32 Aligned_cols=213 Identities=23% Similarity=0.309 Sum_probs=167.6
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc----cceEEEEcC
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP----QRVAAYISQ 246 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q 246 (1436)
+..+.+++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|
T Consensus 8 l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q 84 (242)
T TIGR03411 8 LSVSFDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQ 84 (242)
T ss_pred eEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEecc
Confidence 334444567999999999999999999999999999999999999887 9999999988754432 246999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccc
Q 038815 247 HDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICAD 326 (1436)
Q Consensus 247 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 326 (1436)
++.+++.+||+||+.++..... ..+....... ..+....++.+++.+|+++..+
T Consensus 85 ~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~------------------------~~~~~~~~~~~l~~~~l~~~~~ 138 (242)
T TIGR03411 85 KPTVFENLTVFENLELALPRDK--SVFASLFFRL------------------------SAEEKDRIEEVLETIGLADEAD 138 (242)
T ss_pred ccccCCCCCHHHHHHHhhhccc--cccccccccc------------------------HHHHHHHHHHHHHHcCCchhhc
Confidence 9999999999999988543110 0000000000 0011233567889999987665
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
+. ++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+.+++.++||
T Consensus 139 ~~-----~~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d 210 (242)
T TIGR03411 139 RL-----AGLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIAD 210 (242)
T ss_pred CC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCC
Confidence 44 457999999999998766 5999999999999999999999998754 4 455567888889999999
Q ss_pred eEEEecCCeEEEecChHHH
Q 038815 402 DIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 402 ~vilL~~G~iv~~G~~~~~ 420 (1436)
+|++|++|++++.|+.+++
T Consensus 211 ~i~~l~~g~~~~~~~~~~~ 229 (242)
T TIGR03411 211 KVTVLHQGSVLAEGSLDQV 229 (242)
T ss_pred EEEEEECCeEEeeCCHHHH
Confidence 9999999999999988765
No 252
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=9.3e-32 Score=311.80 Aligned_cols=200 Identities=20% Similarity=0.287 Sum_probs=163.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC-------ccceEEEEcCCC--
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE-------PQRVAAYISQHD-- 248 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d-- 248 (1436)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 46999999999999999999999999999999999999987 999999999875421 245799999985
Q ss_pred CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc-ccccc
Q 038815 249 NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD-ICADT 327 (1436)
Q Consensus 249 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t 327 (1436)
.+++ .||.||+.|+....+.. . .+....++.+++.+||+ +..++
T Consensus 97 ~l~~-~tv~e~i~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~ 141 (286)
T PRK13646 97 QLFE-DTVEREIIFGPKNFKMN----------L------------------------DEVKNYAHRLLMDLGFSRDVMSQ 141 (286)
T ss_pred ccch-hhHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhhhC
Confidence 3444 59999999864322110 0 01122356789999996 45543
Q ss_pred cccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
.++.|||||||||+||+++ +++|||||+|||+.++.++.+.++++... .+++|+.++|+.+++.+.+|+
T Consensus 142 -----~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dr 215 (286)
T PRK13646 142 -----SPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADE 215 (286)
T ss_pred -----CcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCE
Confidence 4567999999999998776 59999999999999999999999998653 355666688888999999999
Q ss_pred EEEecCCeEEEecChHHHH
Q 038815 403 IILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~ 421 (1436)
|++|++|++++.|+++++.
T Consensus 216 i~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 216 VIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999988764
No 253
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=7.9e-32 Score=311.92 Aligned_cols=200 Identities=25% Similarity=0.364 Sum_probs=166.3
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
-++++|+++.++ +++.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 578899988653 12469999999999999999999999999999999999865 4579999999875
Q ss_pred c-----cccccceEEEeccCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 038815 946 K-----QETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGL 1019 (1436)
Q Consensus 946 ~-----~~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~l 1019 (1436)
. ...+++.+||++|++. .....||+|++.+..... ..+.++..+.++++++.+||.+..+.. ++.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 3 1235577999999863 234579999998864322 223444456789999999998877765 4679
Q ss_pred CHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1020 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1020 SgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||||++||++|+.+|++|+|||||+|||+.+...+++.|++++++ |+|||+++|+++. +-+..|+
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~-~~~~~dr 211 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDI-VPLYCDN 211 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHHhCCE
Confidence 999999999999999999999999999999999999999999999875 8999999999764 5567887
No 254
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=8.3e-32 Score=312.34 Aligned_cols=200 Identities=25% Similarity=0.347 Sum_probs=162.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC-------CccceEEEEcCCCC-
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-------EPQRVAAYISQHDN- 249 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~- 249 (1436)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 46999999999999999999999999999999999999997 99999999987432 11356899999862
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc-cccccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD-ICADTL 328 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~ 328 (1436)
.+..+||.||+.|+....+.. + .+....++.+++.+||+ ...++
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~- 141 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------E------------------------DEAKEKALKWLKKVGLSEDLISK- 141 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhHhhC-
Confidence 344689999998864322110 0 01122356789999996 44444
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
.++.|||||||||+||+++ +|+|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.++||+|
T Consensus 142 ----~~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 142 ----SPFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred ----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEE
Confidence 4557999999999998776 4999999999999999999999998754 3556666889999999999999
Q ss_pred EEecCCeEEEecChHHHH
Q 038815 404 ILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~~ 421 (1436)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 255
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=99.98 E-value=1e-31 Score=298.72 Aligned_cols=196 Identities=23% Similarity=0.281 Sum_probs=163.0
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|++..+. ++.+|+++|+.+++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEc
Confidence 478888877542 2469999999999999999999999999999999999865 3579999999876
Q ss_pred ccccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 038815 946 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 1025 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1025 (1436)
.....++.++|++|++.+++.+|++|++.+...++. .. ..+.++++++.++|.+..++.+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 533345579999999988888999999987654321 11 2235678899999987777663 579999999
Q ss_pred HHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1026 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1026 Rl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|++||++++.+|++|+|||||+|||..+...+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~ 206 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTR 206 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcce
Confidence 999999999999999999999999999999999999998888999999999975 34444443
No 256
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=99.98 E-value=9.9e-32 Score=300.89 Aligned_cols=181 Identities=24% Similarity=0.330 Sum_probs=155.7
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccccccceEEEeccCCCCCCCCCHHH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQETFTRISGYCEQNDIHSPLVTVYE 971 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 971 (1436)
+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 569999999999999999999999999999999999865 45899999998654322 257999999998888899999
Q ss_pred HHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCH
Q 038815 972 SLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1051 (1436)
Q Consensus 972 ~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~ 1051 (1436)
++.+....+. .+ ...+.++++.+||.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 90 ~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 90 NLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKK-----AKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred HHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhh-----HhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 9987654432 11 23467899999998877765 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1052 RAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1052 ~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.++..+++.|++++++|+|||+++|++. ++.+..|+
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~ 193 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILS-EVQQLADH 193 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCE
Confidence 9999999999999877999999999975 46667777
No 257
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.98 E-value=1e-31 Score=304.68 Aligned_cols=200 Identities=27% Similarity=0.287 Sum_probs=163.1
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|++..++ ++.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecC
Confidence 56677766542 2469999999999999999999999999999999999865 35799999997653
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHhhhhcCC-----CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 038815 947 QE----TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLP-----PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVS 1017 (1436)
Q Consensus 947 ~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1017 (1436)
.. ..++.++|++|++.+++.+||+||+.+....... .....++..+.++++++.+|+.+..+.. ++
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRL-----AG 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCC-----hh
Confidence 21 1235699999999999999999999885432100 0011233445688999999998877665 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~ 211 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADK 211 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999876 799999999975 46677787
No 258
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=7.3e-32 Score=314.19 Aligned_cols=203 Identities=24% Similarity=0.309 Sum_probs=164.6
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.++... .....+|+|||+.|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 67888888764210 0113599999999999999999999999999999999998653 4699999886431
Q ss_pred ---------------------------cccccceEEEeccCC-CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHH
Q 038815 947 ---------------------------QETFTRISGYCEQND-IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIM 998 (1436)
Q Consensus 947 ---------------------------~~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l 998 (1436)
....++.+|||+|++ ..+...||+|++.|..... ..+.++..+++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 123456799999985 3344579999998865432 234555566789999
Q ss_pred HHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecC
Q 038815 999 ELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQ 1077 (1436)
Q Consensus 999 ~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq 1077 (1436)
+.+||. +..+.. +..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++.+.|.|||+++|+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566655 46799999999999999999999999999999999999999999999998779999999999
Q ss_pred CCHHHHHHhhh
Q 038815 1078 PSIDIFESFDE 1088 (1436)
Q Consensus 1078 ps~~if~~FD~ 1088 (1436)
+. .+.+..|+
T Consensus 225 ~~-~~~~~adr 234 (305)
T PRK13651 225 LD-NVLEWTKR 234 (305)
T ss_pred HH-HHHHhCCE
Confidence 64 46677887
No 259
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=99.98 E-value=1.1e-31 Score=306.73 Aligned_cols=208 Identities=33% Similarity=0.441 Sum_probs=166.2
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCC
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQH 247 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~ 247 (1436)
+..+++++.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|+
T Consensus 8 l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~ 84 (258)
T PRK13548 8 LSVRLGGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQH 84 (258)
T ss_pred EEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccC
Confidence 334444567999999999999999999999999999999999999887 9999999988754332 3568999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
+.+++.+||+||+.++....+.. .+ +....++.+++.+||++..++
T Consensus 85 ~~~~~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~ 130 (258)
T PRK13548 85 SSLSFPFTVEEVVAMGRAPHGLS----------RA------------------------EDDALVAAALAQVDLAHLAGR 130 (258)
T ss_pred CcCCCCCCHHHHHHhhhcccCCC----------cH------------------------HHHHHHHHHHHHcCCHhHhcC
Confidence 88888899999998853211100 00 011234668889999875555
Q ss_pred cccCcccCCCCHHHHHHHhhhh-----------hhhhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 038815 328 LVGDEMIRGISGGQKRRVTTGP-----------ALALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPET 396 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~-----------a~vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~ 396 (1436)
. +..|||||||||+||+ |.+++|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+.+++
T Consensus 131 ~-----~~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~ 204 (258)
T PRK13548 131 D-----YPQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERG-LAVIVVLHDLNLA 204 (258)
T ss_pred C-----cccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHH
Confidence 4 4579999999999954 456999999999999999999999999863334 4555678888899
Q ss_pred HhhcCeEEEecCCeEEEecChHHHH
Q 038815 397 YDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 397 ~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
.+++|+|++|++|++++.|+.+++.
T Consensus 205 ~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 205 ARYADRIVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred HHhcCEEEEEECCEEEeeCCHHHHh
Confidence 9999999999999999999887653
No 260
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1e-31 Score=307.14 Aligned_cols=202 Identities=23% Similarity=0.251 Sum_probs=164.3
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.+. ++.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 367788876542 3579999999999999999999999999999999999865 4579999999865
Q ss_pred ccc---c-ccceEEEeccCCCCCCCCCHHHHHHHhhhhcCC----------CCC--CHHHHHHHHHHHHHHcCCCccccc
Q 038815 946 KQE---T-FTRISGYCEQNDIHSPLVTVYESLLYSAWLRLP----------PEV--DSETRKMFIEEIMELVELNPLRQS 1009 (1436)
Q Consensus 946 ~~~---~-~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~----------~~~--~~~~~~~~v~~~l~~l~L~~~~~~ 1009 (1436)
... . .+..++|++|++.+++.+||+||+.+....... ... ...+..+.++++++.+||.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 321 1 234589999999999999999999886432110 000 112234567889999999877666
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1010 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1010 ~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
. ++.||||||||++||++|+.+|++|+|||||+|||..+...+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 150 ~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 Q-----AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 5 3579999999999999999999999999999999999999999999999875 899999999975 56667777
No 261
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.2e-31 Score=306.46 Aligned_cols=224 Identities=23% Similarity=0.266 Sum_probs=169.7
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc----cceEEEE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP----QRVAAYI 244 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv 244 (1436)
+++..+++++++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|+
T Consensus 9 ~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~ 85 (255)
T PRK11300 9 SGLMMRFGGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRT 85 (255)
T ss_pred eeEEEEECCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEe
Confidence 34444455567999999999999999999999999999999999999987 9999999998765332 2348899
Q ss_pred cCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccc
Q 038815 245 SQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDIC 324 (1436)
Q Consensus 245 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 324 (1436)
+|++.+++.+||+||+.++....... +....... .+..+ ....+....++.+++.+||++.
T Consensus 86 ~q~~~~~~~~tv~enl~~~~~~~~~~---~~~~~~~~-------~~~~~---------~~~~~~~~~~~~~l~~~gl~~~ 146 (255)
T PRK11300 86 FQHVRLFREMTVIENLLVAQHQQLKT---GLFSGLLK-------TPAFR---------RAESEALDRAATWLERVGLLEH 146 (255)
T ss_pred ccCcccCCCCcHHHHHHHhhhccccc---hhhhhhcc-------ccccc---------cchhHHHHHHHHHHHhCChhhh
Confidence 99999999999999999864311000 00000000 00000 0000112235677889999765
Q ss_pred ccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 038815 325 ADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDL 399 (1436)
Q Consensus 325 ~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~l 399 (1436)
.+. .++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+.. +++||.++|+.+++.++
T Consensus 147 ~~~-----~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tii~~sH~~~~~~~~ 220 (255)
T PRK11300 147 ANR-----QAGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEH-NVTVLLIEHDMKLVMGI 220 (255)
T ss_pred hhC-----ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHh
Confidence 554 4557999999999998766 599999999999999999999999876532 45566678888999999
Q ss_pred cCeEEEecCCeEEEecChHHH
Q 038815 400 FDDIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 400 fD~vilL~~G~iv~~G~~~~~ 420 (1436)
+|++++|++|++++.|+++++
T Consensus 221 ~d~i~~l~~g~i~~~~~~~~~ 241 (255)
T PRK11300 221 SDRIYVVNQGTPLANGTPEEI 241 (255)
T ss_pred CCEEEEEECCeEEecCCHHHH
Confidence 999999999999999998765
No 262
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=8.3e-32 Score=298.95 Aligned_cols=181 Identities=27% Similarity=0.319 Sum_probs=152.1
Q ss_pred ceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc-ccccceEEEeccCCCCCCCCCHHHHHHH
Q 038815 897 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ-ETFTRISGYCEQNDIHSPLVTVYESLLY 975 (1436)
Q Consensus 897 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f 975 (1436)
|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|+..+++.+||+||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999865 357999999986532 1234679999999999999999999987
Q ss_pred hhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHH
Q 038815 976 SAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1055 (1436)
Q Consensus 976 ~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~ 1055 (1436)
....+.. . .++.++.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||..++.
T Consensus 94 ~~~~~~~--~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGLK--L-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred ccccccC--c-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 5432111 1 1233456889999999988777663 579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1056 IVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1056 ~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.+++.|++++++ |+|||+++|++. ++-+.+|+
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 198 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQR 198 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCE
Confidence 999999998764 899999999974 45556676
No 263
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=99.98 E-value=1.2e-31 Score=305.89 Aligned_cols=205 Identities=24% Similarity=0.322 Sum_probs=166.1
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC----------------
Q 038815 173 TRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE---------------- 236 (1436)
Q Consensus 173 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---------------- 236 (1436)
.+++.+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....
T Consensus 8 ~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~ 84 (252)
T TIGR03005 8 KRFGILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQ 84 (252)
T ss_pred EEeCCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHH
Confidence 3334457999999999999999999999999999999999999887 999999998875321
Q ss_pred ccceEEEEcCCCCCCCCCCHHHHHHhhhhh-ccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHH
Q 038815 237 PQRVAAYISQHDNHIGEMTVRETLAFSARC-QGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYY 315 (1436)
Q Consensus 237 ~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (1436)
.++.++|++|++.+++.+||.||+.++... .+. .. .+....++.+
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~----------~~------------------------~~~~~~~~~~ 130 (252)
T TIGR03005 85 MRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGM----------AR------------------------AEAEKRAMEL 130 (252)
T ss_pred HhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCC----------CH------------------------HHHHHHHHHH
Confidence 145799999999999999999999875321 000 00 0011234567
Q ss_pred HHHcCCcccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEe
Q 038815 316 LKVLGLDICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLL 390 (1436)
Q Consensus 316 l~~lgL~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~ 390 (1436)
++.+|+++..+. .++.|||||||||+||+++ +++|||||+|||+.+...+.+.|+++.+. .+++++.++
T Consensus 131 l~~~gl~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivs 204 (252)
T TIGR03005 131 LDMVGLADKADH-----MPAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVT 204 (252)
T ss_pred HHHcCChhHhhc-----ChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEe
Confidence 899999766553 4567999999999998766 49999999999999999999999987653 345666678
Q ss_pred cChhhHHhhcCeEEEecCCeEEEecChHHH
Q 038815 391 QPAPETYDLFDDIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 391 q~~~~~~~lfD~vilL~~G~iv~~G~~~~~ 420 (1436)
|+.+++.+++|++++|++|++++.|+.+++
T Consensus 205 H~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T TIGR03005 205 HEMGFAREFADRVCFFDKGRIVEQGKPDEI 234 (252)
T ss_pred CCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 888899999999999999999999988765
No 264
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.2e-31 Score=306.19 Aligned_cols=200 Identities=23% Similarity=0.268 Sum_probs=161.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~---~~~G~i~i~g 942 (1436)
.+.++|+++.+. ++.+|+|+|+.+++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 578889887653 245999999999999999999999999999999999976532 2479999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC----cccccccCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN----PLRQSLVGL 1013 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 1013 (1436)
.+... ...++.+||++|+...++ .||+||+.+....+. .....+..+.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 76531 234667999999987774 899999988654321 112233456688889998874 233443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1014 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1014 ~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
++.||||||||++|||+|+.+|++|+|||||+|||+.+...+++.|+++++ +.|||+++|++. ++-+..|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~sH~~~-~~~~~~d~ 218 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE-SYTIIIVTHNMQ-QAGRISDR 218 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCE
Confidence 468999999999999999999999999999999999999999999999964 799999999986 45666777
No 265
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=8.7e-32 Score=307.46 Aligned_cols=201 Identities=25% Similarity=0.321 Sum_probs=164.5
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+. ++.+|+|+|+.+++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 56777776542 3579999999999999999999999999999999999765 35799999998653
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 038815 947 Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLP-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTE 1022 (1436)
Q Consensus 947 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1022 (1436)
. ...++.++|++|+..+++.+|+.|++.+....... .....+...+.++++++.++|.+..++. +..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----LTDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----cccCCHH
Confidence 2 23456799999998888889999999875321000 0111123345678999999998777765 3579999
Q ss_pred HHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1023 qrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~ 207 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDH 207 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCE
Confidence 999999999999999999999999999999999999999998877999999999986 57777887
No 266
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=7.6e-32 Score=310.57 Aligned_cols=198 Identities=23% Similarity=0.284 Sum_probs=163.6
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++++|+++.++ +++.+|+|||++|++||++||+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 45667766542 12459999999999999999999999999999999999865 45799999998753
Q ss_pred c----ccccceEEEeccCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 947 Q----ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 947 ~----~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
. ...++.+||++|++. .+...||+||+.|..... ..+..+..+.++++++.++|.+..+..+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 2 234567999999964 356689999998865432 2334444567889999999988777653 57999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||++||++|+.+|+||+|||||+|||+.++..+++.|+++++.|.|||+++|++.. + +..|+
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~-~-~~~d~ 204 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEE-L-HDADR 204 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-H-hhCCE
Confidence 99999999999999999999999999999999999999999998779999999999864 4 55777
No 267
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=99.98 E-value=1.3e-31 Score=300.01 Aligned_cols=228 Identities=24% Similarity=0.304 Sum_probs=182.3
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-C-CCCcccEEEEcCccCCCCCc-------cceEEEEcC
Q 038815 176 KHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLD-S-SLKVSGRVTYNGHNMDEFEP-------QRVAAYISQ 246 (1436)
Q Consensus 176 ~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~-~-~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q 246 (1436)
+...+++|||+.+++||+++|+|.|||||||+.++|.|+++ + ...++|+|.|+|.++-.+.. .+.++||+|
T Consensus 16 g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ 95 (316)
T COG0444 16 GVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQ 95 (316)
T ss_pred ccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEc
Confidence 35679999999999999999999999999999999999997 4 33568999999998755442 257999999
Q ss_pred CC--CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccc
Q 038815 247 HD--NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDIC 324 (1436)
Q Consensus 247 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 324 (1436)
++ .+.|.+||.+.+.-..+.+... . ...++...+.++|+.+||++-
T Consensus 96 ~p~~sLnPv~~Ig~Qi~E~l~~h~~~---------~-----------------------~~~ea~~~a~~~L~~Vgi~~~ 143 (316)
T COG0444 96 DPMTSLNPVMTIGDQIAEVLRLHGKG---------L-----------------------SKKEAKERAIELLELVGIPDP 143 (316)
T ss_pred CchhhcCChhhHHHHHHHHHHHhhcc---------h-----------------------hhHHHHHHHHHHHHHcCCCCH
Confidence 96 6889999999987665432110 0 011234456778999999864
Q ss_pred ccccccCcccCCCCHHHHHHHhhhhh-----hhhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 038815 325 ADTLVGDEMIRGISGGQKRRVTTGPA-----LALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDL 399 (1436)
Q Consensus 325 ~~t~vg~~~~rgLSGGqrkRvsia~a-----~vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~l 399 (1436)
.. +.+.++.+|||||||||.||.| .+|+.||||++||..++.+|++.|+++.+. .+++++.++|+..-+.++
T Consensus 144 ~~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e-~~~aiilITHDl~vva~~ 220 (316)
T COG0444 144 ER--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQRE-KGTALILITHDLGVVAEI 220 (316)
T ss_pred HH--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHh
Confidence 32 4568899999999999999654 469999999999999999999999999874 567777799999999999
Q ss_pred cCeEEEecCCeEEEecChHHHHHHHHhcCCCCCCCCCHHHHHHhhcC
Q 038815 400 FDDIILLSDGLIVYLGPRELVLDFFESMGFKCPERKGVADFLQEVTS 446 (1436)
Q Consensus 400 fD~vilL~~G~iv~~G~~~~~~~~F~~lGf~cp~~~~~adfl~~v~s 446 (1436)
||+|+||+.|+||+.|+.+++. +-|.+.-+...+..+..
T Consensus 221 aDri~VMYaG~iVE~g~~~~i~--------~~P~HPYT~~Ll~s~P~ 259 (316)
T COG0444 221 ADRVAVMYAGRIVEEGPVEEIF--------KNPKHPYTRGLLNSLPR 259 (316)
T ss_pred cceEEEEECcEEEEeCCHHHHh--------cCCCChHHHHHHHhCcc
Confidence 9999999999999999999874 34444444444444433
No 268
>PRK10908 cell division protein FtsE; Provisional
Probab=99.98 E-value=1e-31 Score=300.52 Aligned_cols=192 Identities=24% Similarity=0.329 Sum_probs=157.4
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC------ccceEEEEcCCCCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE------PQRVAAYISQHDNH 250 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~ 250 (1436)
.+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+
T Consensus 14 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~ 90 (222)
T PRK10908 14 GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHL 90 (222)
T ss_pred CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccc
Confidence 457999999999999999999999999999999999999887 999999999875432 23578999999988
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVG 330 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 330 (1436)
++.+||+||+.+.....+.. . ++....++.+++.+||.+..+.
T Consensus 91 ~~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~--- 133 (222)
T PRK10908 91 LMDRTVYDNVAIPLIIAGAS----------G------------------------DDIRRRVSAALDKVGLLDKAKN--- 133 (222)
T ss_pred cccccHHHHHHhHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhC---
Confidence 89999999998864332110 0 0011224567889999765554
Q ss_pred CcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 038815 331 DEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 405 (1436)
Q Consensus 331 ~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vil 405 (1436)
.+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ . +++++.++|+.+++...+|+|++
T Consensus 134 --~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~ 209 (222)
T PRK10908 134 --FPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLT 209 (222)
T ss_pred --CchhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEE
Confidence 4457999999999998776 4999999999999999999999998754 2 45566688888999999999999
Q ss_pred ecCCeEE
Q 038815 406 LSDGLIV 412 (1436)
Q Consensus 406 L~~G~iv 412 (1436)
|++|+++
T Consensus 210 l~~G~i~ 216 (222)
T PRK10908 210 LSDGHLH 216 (222)
T ss_pred EECCEEc
Confidence 9999985
No 269
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.7e-31 Score=313.83 Aligned_cols=202 Identities=21% Similarity=0.263 Sum_probs=167.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc------cceEEEEcCCC--C
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP------QRVAAYISQHD--N 249 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d--~ 249 (1436)
+.+|+|||++|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 57999999999999999999999999999999999999886 9999999998765432 35799999997 5
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc-ccccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI-CADTL 328 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~ 328 (1436)
+.|.+||.+++....+.... ..+ .+....+.++++.+||+. ..+
T Consensus 105 l~p~~~v~~~l~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~gL~~~~~~-- 149 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTS---------LSA------------------------AERREKALAMMAKVGLRPEHYD-- 149 (327)
T ss_pred cCCccCHHHHHHHHHHHccC---------CCH------------------------HHHHHHHHHHHHHCCCChHHhc--
Confidence 88999999999875443210 000 011234577899999963 334
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
.+++.|||||||||+||+|+ +|++||||+|||..++.++++.|+++.+.. +++++.++|+...+.+++|+|
T Consensus 150 ---~~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~-g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 150 ---RYPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQEL-GLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred ---CCCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEE
Confidence 45678999999999998877 499999999999999999999999986643 456666899999999999999
Q ss_pred EEecCCeEEEecChHHHH
Q 038815 404 ILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~~ 421 (1436)
++|++|++++.|+.+++.
T Consensus 226 ~vm~~G~ive~g~~~~~~ 243 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIF 243 (327)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999998875
No 270
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=99.98 E-value=1.1e-31 Score=306.93 Aligned_cols=199 Identities=25% Similarity=0.326 Sum_probs=163.6
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.++ ++.+|+|+|+.+++|++++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 56777776543 3569999999999999999999999999999999999865 45799999997643
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 038815 947 Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQ 1023 (1436)
Q Consensus 947 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1023 (1436)
. ...++.++|++|+..+++.+||+|++.+..... ....++..+.++++++.++|.+..+..+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 234467999999988878899999998754321 1122233456789999999988777663 5799999
Q ss_pred HHHHHHHHHHh------hCCCcceecCCCCCCCHHHHHHHHHHHHHHH-HcCCEEEEEecCCCHHHHHHhhhh
Q 038815 1024 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVKNTV-ETGRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1024 rkRl~ia~~L~------~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
||||+||++|+ .+|++|+|||||+|||+.+...+.+.|++++ +.|.|||+++|++. ++.+..|+.
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i 211 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRI 211 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEE
Confidence 99999999999 5999999999999999999999999999997 56999999999975 466677873
No 271
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=99.98 E-value=1.2e-31 Score=299.90 Aligned_cols=191 Identities=25% Similarity=0.354 Sum_probs=153.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-------cceEEEEcCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-------QRVAAYISQHDNH 250 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 250 (1436)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 56999999999999999999999999999999999999987 9999999998755432 1469999999988
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVG 330 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 330 (1436)
++.+||+||+.+........ . .+....+..+++.+||++..+.
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~--- 137 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS----------V------------------------KEAKERAYEMLEKVGLEHRINH--- 137 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhC---
Confidence 99999999998854321100 0 0011234568889999865554
Q ss_pred CcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 038815 331 DEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 405 (1436)
Q Consensus 331 ~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vil 405 (1436)
.++.|||||||||+||+++ +++|||||+|||..++..+.+.|+++++..+.|+ +.++|+..++. .+|+|++
T Consensus 138 --~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~ti-i~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 138 --RPSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSF-LVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred --ChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEE-EEEeCCHHHHh-hcCEEEE
Confidence 3457999999999998766 5999999999999999999999998865434454 55667777765 4799999
Q ss_pred ecCCeEE
Q 038815 406 LSDGLIV 412 (1436)
Q Consensus 406 L~~G~iv 412 (1436)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999975
No 272
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.7e-31 Score=304.37 Aligned_cols=215 Identities=24% Similarity=0.309 Sum_probs=166.7
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCCC---ccceEEEEc
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEFE---PQRVAAYIS 245 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~~---~~~~~~yv~ 245 (1436)
+..+.++.++|+|+|++|++||+++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++
T Consensus 9 l~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~ 88 (250)
T PRK14247 9 LKVSFGQVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVF 88 (250)
T ss_pred eEEEECCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEe
Confidence 334444567999999999999999999999999999999999998741 124999999999875432 235789999
Q ss_pred CCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccc
Q 038815 246 QHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICA 325 (1436)
Q Consensus 246 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 325 (1436)
|++.+++.+||+||+.++.+..+... .+ .+....++.+++.+||.+..
T Consensus 89 q~~~~~~~~tv~enl~~~~~~~~~~~--------~~------------------------~~~~~~~~~~l~~~~l~~~~ 136 (250)
T PRK14247 89 QIPNPIPNLSIFENVALGLKLNRLVK--------SK------------------------KELQERVRWALEKAQLWDEV 136 (250)
T ss_pred ccCccCCCCcHHHHHHHHHHhccccC--------CH------------------------HHHHHHHHHHHHHcCCCcch
Confidence 99988999999999998653221000 00 01122356688889986421
Q ss_pred cccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 038815 326 DTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLF 400 (1436)
Q Consensus 326 ~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lf 400 (1436)
+.. -+..+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ + ++++.++|+.+++.+++
T Consensus 137 ~~~-~~~~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~ 212 (250)
T PRK14247 137 KDR-LDAPAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK--D-MTIVLVTHFPQQAARIS 212 (250)
T ss_pred hhh-hcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhc
Confidence 111 1345668999999999998766 5999999999999999999999998742 4 55666788888899999
Q ss_pred CeEEEecCCeEEEecChHHHH
Q 038815 401 DDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 401 D~vilL~~G~iv~~G~~~~~~ 421 (1436)
|+|++|++|++++.|+.+++.
T Consensus 213 d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 213 DYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred CEEEEEECCeEEEECCHHHHH
Confidence 999999999999999988763
No 273
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=99.98 E-value=1.5e-31 Score=298.87 Aligned_cols=202 Identities=23% Similarity=0.323 Sum_probs=166.1
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+... .+.+.+|+|+|+.+++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 4567777654310 012579999999999999999999999999999999999765 45799999998653
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 038815 947 Q------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLS 1020 (1436)
Q Consensus 947 ~------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1020 (1436)
. ...++.++|++|++.+++..|+.||+.+...... ....++..+.++++++.++|.+..+.. ++.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYY-----PHNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCC
Confidence 2 1245789999999988888999999988654321 123444556789999999998777765 36799
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+..|+
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~ 210 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADR 210 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCE
Confidence 9999999999999999999999999999999999999999999876 4899999999985 3466665
No 274
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.98 E-value=7.5e-32 Score=276.20 Aligned_cols=199 Identities=27% Similarity=0.393 Sum_probs=170.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCCCCCCCCHH
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDNHIGEMTVR 257 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 257 (1436)
+.+|+|||+.|.+||.+.++||||||||||||+++|..+|. .|+|.+||++++. |...-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~g--PgaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEG--PGAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccC--CCccceeEeccCccchhhHHH
Confidence 55999999999999999999999999999999999999997 9999999998754 334568999999999999999
Q ss_pred HHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccCCC
Q 038815 258 ETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIRGI 337 (1436)
Q Consensus 258 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~rgL 337 (1436)
+|++|+.+++|+++. +...++...+...||+...+ +++-+|
T Consensus 93 dNvafgL~l~Gi~k~----------------------------------~R~~~a~q~l~~VgL~~~~~-----~~i~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA----------------------------------QRREIAHQMLALVGLEGAEH-----KYIWQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH----------------------------------HHHHHHHHHHHHhCcccccc-----cceEee
Confidence 999999999987531 12234567889999987655 456689
Q ss_pred CHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC--Ce
Q 038815 338 SGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD--GL 410 (1436)
Q Consensus 338 SGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~--G~ 410 (1436)
||||||||.||||+. |+||||.++||.-+++++...|-++.+..++. +..++|+.+|+.-+++++++|+. ||
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~-~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQ-VLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCe-EEEEeccHHHHHhhhheeEEecCCCce
Confidence 999999999999884 99999999999999999999999887765554 45589999999999999999985 79
Q ss_pred EEEecChHHHH
Q 038815 411 IVYLGPRELVL 421 (1436)
Q Consensus 411 iv~~G~~~~~~ 421 (1436)
|+..-+.+-..
T Consensus 213 vv~~~~~df~r 223 (259)
T COG4525 213 VVERLPLDFAR 223 (259)
T ss_pred eeEecCCCHHH
Confidence 99877665433
No 275
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=99.98 E-value=1.2e-31 Score=302.54 Aligned_cols=188 Identities=30% Similarity=0.376 Sum_probs=157.6
Q ss_pred CceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc--ccccceEEEec-cCCCCCCC
Q 038815 890 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ--ETFTRISGYCE-QNDIHSPL 966 (1436)
Q Consensus 890 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~d~~~~~ 966 (1436)
+.+.+|+|+|+.+++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.+... ..+++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 44679999999999999999999999999999999999765 357999999976422 23456799997 55677788
Q ss_pred CCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCC
Q 038815 967 VTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1046 (1436)
Q Consensus 967 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPT 1046 (1436)
+||+|++.+...++. ...++..+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 999999988654431 223344556788999999988877764 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1047 SGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1047 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+|||+.+...+.+.|++++++ |+|||+++|++. ++-+..|+
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~ 223 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARR 223 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999999764 899999999985 55666676
No 276
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=99.98 E-value=1.4e-31 Score=299.75 Aligned_cols=197 Identities=26% Similarity=0.336 Sum_probs=162.0
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCCCCC
Q 038815 173 TRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDNHIG 252 (1436)
Q Consensus 173 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~ 252 (1436)
.+.+++++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++
T Consensus 8 ~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~ 83 (223)
T TIGR03740 8 KRFGKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYE 83 (223)
T ss_pred EEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccc
Confidence 3334467999999999999999999999999999999999999887 999999998765322 357899999998899
Q ss_pred CCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCc
Q 038815 253 EMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDE 332 (1436)
Q Consensus 253 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 332 (1436)
.+||+||+.+.....+.. ...++.+++.+||++..+..
T Consensus 84 ~~t~~~~~~~~~~~~~~~--------------------------------------~~~~~~~l~~~~l~~~~~~~---- 121 (223)
T TIGR03740 84 NLTARENLKVHTTLLGLP--------------------------------------DSRIDEVLNIVDLTNTGKKK---- 121 (223)
T ss_pred cCCHHHHHHHHHHHcCCC--------------------------------------HHHHHHHHHHcCCcHHHhhh----
Confidence 999999998754322100 01245678899998765544
Q ss_pred ccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
++.||||||||++||++. +++|||||+|||+.++..+.+.|+++.+ .+. +|+.++|+..++.+.+|+|++|+
T Consensus 122 -~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~-tiii~sH~~~~~~~~~d~i~~l~ 198 (223)
T TIGR03740 122 -AKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGI-TVILSSHILSEVQQLADHIGIIS 198 (223)
T ss_pred -HhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCC-EEEEEcCCHHHHHHhcCEEEEEe
Confidence 457999999999998766 5999999999999999999999998754 344 45557778888999999999999
Q ss_pred CCeEEEecChH
Q 038815 408 DGLIVYLGPRE 418 (1436)
Q Consensus 408 ~G~iv~~G~~~ 418 (1436)
+|++++.|++.
T Consensus 199 ~g~i~~~~~~~ 209 (223)
T TIGR03740 199 EGVLGYQGKIN 209 (223)
T ss_pred CCEEEEecChh
Confidence 99999999764
No 277
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.3e-31 Score=308.61 Aligned_cols=200 Identities=27% Similarity=0.382 Sum_probs=162.2
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc----cceEEEEcCCCC-CC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP----QRVAAYISQHDN-HI 251 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~-~~ 251 (1436)
.+.+|+|||++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+
T Consensus 14 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (274)
T PRK13644 14 GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQF 90 (274)
T ss_pred CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhc
Confidence 346999999999999999999999999999999999999887 9999999998754321 356999999975 46
Q ss_pred CCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccC
Q 038815 252 GEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGD 331 (1436)
Q Consensus 252 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 331 (1436)
..+||.||+.|.....+.. + .+....++.+++.+||++..++.
T Consensus 91 ~~~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~--- 133 (274)
T PRK13644 91 VGRTVEEDLAFGPENLCLP----------P------------------------IEIRKRVDRALAEIGLEKYRHRS--- 133 (274)
T ss_pred ccchHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCHHHhcCC---
Confidence 7789999998865322110 0 01112356788999998766654
Q ss_pred cccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 038815 332 EMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILL 406 (1436)
Q Consensus 332 ~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL 406 (1436)
++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++ ..+|+|++|
T Consensus 134 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~~tH~~~~~-~~~d~v~~l 208 (274)
T PRK13644 134 --PKTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-K-GKTIVYITHNLEEL-HDADRIIVM 208 (274)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHH-hhCCEEEEE
Confidence 457999999999998776 4999999999999999999999998764 3 44555577777777 569999999
Q ss_pred cCCeEEEecChHHHH
Q 038815 407 SDGLIVYLGPRELVL 421 (1436)
Q Consensus 407 ~~G~iv~~G~~~~~~ 421 (1436)
++|++++.|+.+++.
T Consensus 209 ~~G~i~~~g~~~~~~ 223 (274)
T PRK13644 209 DRGKIVLEGEPENVL 223 (274)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999988764
No 278
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=9e-32 Score=310.60 Aligned_cols=200 Identities=26% Similarity=0.290 Sum_probs=166.3
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
-+.++|+++.+.. ..+.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 3678888876531 12459999999999999999999999999999999999866 3579999999875
Q ss_pred cc---ccccceEEEeccCC-CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 946 KQ---ETFTRISGYCEQND-IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
.. ...++.+||++|+. ..++..||.||+.+..... ..+.++..+.++++++.+||.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCH
Confidence 43 23456799999997 3566789999998865432 1234445567899999999998877764 57999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|++.. + +..|+
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~-~-~~~d~ 209 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDE-A-AQADR 209 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH-H-HcCCE
Confidence 9999999999999999999999999999999999999999999876 8999999999864 4 35787
No 279
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=99.98 E-value=1.6e-31 Score=305.74 Aligned_cols=209 Identities=26% Similarity=0.316 Sum_probs=167.2
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC--------------
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-------------- 235 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------------- 235 (1436)
++..+++++++|+|+|+.|++||+++|+|||||||||||++|+|.++|+ +|+|+++|.++...
T Consensus 10 ~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~ 86 (257)
T PRK10619 10 DLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQ 86 (257)
T ss_pred eeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchH
Confidence 4444445567999999999999999999999999999999999999887 99999999876421
Q ss_pred --CccceEEEEcCCCCCCCCCCHHHHHHhhhh-hccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHH
Q 038815 236 --EPQRVAAYISQHDNHIGEMTVRETLAFSAR-CQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLT 312 (1436)
Q Consensus 236 --~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (1436)
..++.++|++|++.+++.+||+||+.++.. ..+. .+ .+....+
T Consensus 87 ~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~----------~~------------------------~~~~~~~ 132 (257)
T PRK10619 87 LRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGL----------SK------------------------QEARERA 132 (257)
T ss_pred HHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCC----------CH------------------------HHHHHHH
Confidence 113578999999999999999999987532 1110 00 0112235
Q ss_pred HHHHHHcCCcccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEE
Q 038815 313 DYYLKVLGLDICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVI 387 (1436)
Q Consensus 313 ~~~l~~lgL~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii 387 (1436)
..+++.+||.+.. .++.++.|||||||||+||+++ +++|||||+|||+.+...+.+.|+++++ . +.+|+
T Consensus 133 ~~~l~~~gl~~~~----~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tii 206 (257)
T PRK10619 133 VKYLAKVGIDERA----QGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GKTMV 206 (257)
T ss_pred HHHHHHcCCChhh----hhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEE
Confidence 6688999997642 1234568999999999998776 4999999999999999999999998764 3 45555
Q ss_pred EEecChhhHHhhcCeEEEecCCeEEEecChHHHH
Q 038815 388 SLLQPAPETYDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 388 ~~~q~~~~~~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
.++|+..++.+++|+|++|++|++++.|+.+++.
T Consensus 207 ivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 207 VVTHEMGFARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred EEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 6788888999999999999999999999987753
No 280
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.9e-31 Score=307.17 Aligned_cols=206 Identities=27% Similarity=0.338 Sum_probs=164.1
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCC--C---CccceEEEEcC
Q 038815 172 PTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDE--F---EPQRVAAYISQ 246 (1436)
Q Consensus 172 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q 246 (1436)
..+++++.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|
T Consensus 8 ~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q 84 (271)
T PRK13638 8 WFRYQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQ 84 (271)
T ss_pred EEEcCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEee
Confidence 33444456999999999999999999999999999999999999987 9999999998742 1 11356999999
Q ss_pred CCC-CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccc
Q 038815 247 HDN-HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICA 325 (1436)
Q Consensus 247 ~d~-~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 325 (1436)
++. .+...|+.||+.+.....+.. . .+....++.+++.+||++..
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~ 130 (271)
T PRK13638 85 DPEQQIFYTDIDSDIAFSLRNLGVP----------E------------------------AEITRRVDEALTLVDAQHFR 130 (271)
T ss_pred ChhhccccccHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHhHh
Confidence 864 345668999998764322110 0 00112346678899998766
Q ss_pred cccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 038815 326 DTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLF 400 (1436)
Q Consensus 326 ~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lf 400 (1436)
++. +..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.. .+ ++|+.++|+..++.+++
T Consensus 131 ~~~-----~~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tii~vtH~~~~~~~~~ 203 (271)
T PRK13638 131 HQP-----IQCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QG-NHVIISSHDIDLIYEIS 203 (271)
T ss_pred cCC-----chhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhC
Confidence 544 457999999999998766 5999999999999999999999999764 34 45666788888999999
Q ss_pred CeEEEecCCeEEEecChHHHH
Q 038815 401 DDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 401 D~vilL~~G~iv~~G~~~~~~ 421 (1436)
|++++|++|++++.|+.+++.
T Consensus 204 d~i~~l~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 204 DAVYVLRQGQILTHGAPGEVF 224 (271)
T ss_pred CEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999988764
No 281
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.98 E-value=9.4e-32 Score=343.31 Aligned_cols=203 Identities=26% Similarity=0.367 Sum_probs=161.3
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGE 253 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 253 (1436)
++++|+|+|++++||+.++|+||||||||||+++|+|.+ |. +|+|.+||+++.+... ++.++||+|++.+|.
T Consensus 362 ~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~- 436 (588)
T PRK11174 362 GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH- 436 (588)
T ss_pred CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-
Confidence 457999999999999999999999999999999999999 76 9999999999887654 468999999997776
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM 333 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 333 (1436)
.|++|||.++.. +.+.+++.++....+ .+..++ .|++..||.||+.
T Consensus 437 ~TI~eNI~~g~~-------------------------~~~~eei~~al~~a~------l~~~i~--~lp~G~dT~vge~- 482 (588)
T PRK11174 437 GTLRDNVLLGNP-------------------------DASDEQLQQALENAW------VSEFLP--LLPQGLDTPIGDQ- 482 (588)
T ss_pred cCHHHHhhcCCC-------------------------CCCHHHHHHHHHHhC------HHHHHH--hcccccccccccC-
Confidence 599999998521 111112222211111 122222 3667789999976
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
...||||||||++||||+ +++||||||+||+.++..|.+.|++.. .++|+|+..|++ +..+.+|+|++|++
T Consensus 483 G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIiItHrl--~~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 AAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLMVTHQL--EDLAQWDQIWVMQD 558 (588)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEEEecCh--HHHHhCCEEEEEeC
Confidence 457999999999999887 499999999999999999999998864 356666654444 55678999999999
Q ss_pred CeEEEecChHHHHH
Q 038815 409 GLIVYLGPRELVLD 422 (1436)
Q Consensus 409 G~iv~~G~~~~~~~ 422 (1436)
|++++.|+.+++.+
T Consensus 559 G~i~e~G~~~eL~~ 572 (588)
T PRK11174 559 GQIVQQGDYAELSQ 572 (588)
T ss_pred CeEeecCCHHHHHh
Confidence 99999999998863
No 282
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=99.98 E-value=1.5e-31 Score=303.46 Aligned_cols=215 Identities=25% Similarity=0.312 Sum_probs=164.6
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCcccEEEEcCccCCCCCc----cceEEEE
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKL--DSSLKVSGRVTYNGHNMDEFEP----QRVAAYI 244 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~--~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv 244 (1436)
+..+++++++|+|+|+.|++||+++|+|||||||||||++|+|.+ +|+ +|+|.++|.++..... +..++|+
T Consensus 6 l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v 82 (243)
T TIGR01978 6 LHVSVEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLA 82 (243)
T ss_pred EEEEECCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEee
Confidence 333444567999999999999999999999999999999999995 565 9999999998755432 2348999
Q ss_pred cCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc-
Q 038815 245 SQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI- 323 (1436)
Q Consensus 245 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 323 (1436)
+|++..++.+||+|++.+.......... .... ...+....++.+++.+||++
T Consensus 83 ~q~~~~~~~~t~~~~~~~~~~~~~~~~~------------------~~~~---------~~~~~~~~~~~~l~~~~l~~~ 135 (243)
T TIGR01978 83 FQYPEEIPGVSNLEFLRSALNARRSARG------------------EEPL---------DLLDFLKLLKAKLALLGMDEE 135 (243)
T ss_pred eccccccCCcCHHHHHHHHHHHhhcccc------------------cccc---------cHHHHHHHHHHHHHHcCCchh
Confidence 9999999999999999886432210000 0000 00011223567889999973
Q ss_pred cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 038815 324 CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 398 (1436)
Q Consensus 324 ~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 398 (1436)
..+..++ ..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ .+ ++|+.++|+.+++..
T Consensus 136 ~~~~~~~----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~vsH~~~~~~~ 209 (243)
T TIGR01978 136 FLNRSVN----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PD-RSFLIITHYQRLLNY 209 (243)
T ss_pred hcccccc----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CC-cEEEEEEecHHHHHh
Confidence 4443332 24999999999998766 5999999999999999999999999854 34 455557788888888
Q ss_pred h-cCeEEEecCCeEEEecChHHHH
Q 038815 399 L-FDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 399 l-fD~vilL~~G~iv~~G~~~~~~ 421 (1436)
. +|++++|++|++++.|+++++.
T Consensus 210 ~~~d~i~~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 210 IKPDYVHVLLDGRIVKSGDVELAK 233 (243)
T ss_pred hcCCeEEEEeCCEEEEecCHHHhc
Confidence 8 8999999999999999987543
No 283
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=1.3e-31 Score=292.53 Aligned_cols=176 Identities=59% Similarity=0.897 Sum_probs=149.7
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.++... .++.+|+|+|+.+++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~~---------~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVKG---------GKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCCC---------CceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 467888887664210 12569999999999999999999999999999999999743224689999999876
Q ss_pred ccccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 038815 946 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 1025 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1025 (1436)
. ..+++.++|++|++.+++.+||+|++.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 4 345677999999998899999999998642110 49999999
Q ss_pred HHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1026 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1026 Rl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|++||++|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||+++|++..++.+.+|+
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~ 178 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDR 178 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCE
Confidence 999999999999999999999999999999999999998877999999999987667777887
No 284
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.2e-31 Score=310.92 Aligned_cols=203 Identities=25% Similarity=0.300 Sum_probs=164.0
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+.... ...+.+|+|||+++++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13641 3 IKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHIT 72 (287)
T ss_pred EEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 56778877653100 001459999999999999999999999999999999999866 35899999998653
Q ss_pred c-------ccccceEEEeccCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 038815 947 Q-------ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVS 1017 (1436)
Q Consensus 947 ~-------~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1017 (1436)
. ...++.+||++|++. .+..+||+|++.|....+ ....++..++++++++.+||. +..+.. ++
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (287)
T PRK13641 73 PETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKS-----PF 144 (287)
T ss_pred cccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCC-----cc
Confidence 1 224567999999862 233579999998765432 223445556789999999997 566665 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+.|.|||+++|++. ++.+..|+
T Consensus 145 ~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~ 214 (287)
T PRK13641 145 ELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADD 214 (287)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 79999999999999999999999999999999999999999999999777999999999975 56677787
No 285
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=99.98 E-value=2.9e-32 Score=343.72 Aligned_cols=188 Identities=28% Similarity=0.426 Sum_probs=158.4
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..++|+|++|.++. ++.+|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 333 ~~I~~~~vsf~Y~~------------~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~--p~~G~I~i~g~~ 398 (529)
T TIGR02868 333 PTLELRDLSFGYPG------------SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLD--PLQGEVTLDGVS 398 (529)
T ss_pred ceEEEEEEEEecCC------------CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEE
Confidence 46999999998741 2349999999999999999999999999999999999876 458999999987
Q ss_pred cc--cccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCCC
Q 038815 945 KK--QETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLPG 1015 (1436)
Q Consensus 945 ~~--~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 1015 (1436)
.. ...+++.++||+|++.+++ -|++||+.++. | +.++ +.++++++..++.+. .||.+|..|
T Consensus 399 i~~~~~~lr~~i~~V~Q~~~lF~-~TI~eNI~~g~----~-~~~~----e~i~~al~~a~l~~~i~~lp~GldT~ige~G 468 (529)
T TIGR02868 399 VSSLQDELRRRISVFAQDAHLFD-TTVRDNLRLGR----P-DATD----EELWAALERVGLADWLRSLPDGLDTVLGEGG 468 (529)
T ss_pred hhhHHHHHHhheEEEccCccccc-ccHHHHHhccC----C-CCCH----HHHHHHHHHcCCHHHHHhCcccccchhcccc
Confidence 54 3456788999999999886 59999998751 1 2222 346677887777543 478888754
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCC
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQP 1078 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp 1078 (1436)
.+||||||||++|||||+++|+||+||||||+||+.++..|++.|+++. +++|+|+++|++
T Consensus 469 -~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~-~~~TvIiItHrl 529 (529)
T TIGR02868 469 -ARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAAL-SGKTVVVITHHL 529 (529)
T ss_pred -CcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEecCC
Confidence 5799999999999999999999999999999999999999999999863 489999999985
No 286
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.2e-31 Score=320.61 Aligned_cols=187 Identities=24% Similarity=0.262 Sum_probs=160.7
Q ss_pred ceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc---c----ccceEEEeccCCCC
Q 038815 891 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE---T----FTRISGYCEQNDIH 963 (1436)
Q Consensus 891 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~d~~ 963 (1436)
...+|+|+|+.|++||+++|+|||||||||||++|+|... +.+|+|.++|.+.... . .++.+|||+|+..+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 3468999999999999999999999999999999999875 3579999999875321 1 23579999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceec
Q 038815 964 SPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1043 (1436)
Q Consensus 964 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lD 1043 (1436)
++.+||+||+.|....+. .+.++..+.++++++.+||.+..+.. ++.|||||||||+|||+|+.+|++|+||
T Consensus 118 ~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~-----~~~LSgGq~QRv~LArAL~~~P~iLLLD 189 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSY-----PDELSGGMRQRVGLARALAINPDILLMD 189 (400)
T ss_pred CCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999999999998765432 23344556788999999999887776 3679999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1044 EPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1044 EPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||+.++..+++.|+++.+ .|+|||+++|++. ++.+..|+
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dr 234 (400)
T PRK10070 190 EAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDR 234 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCE
Confidence 99999999999999999999875 4899999999975 56777888
No 287
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.98 E-value=1.2e-31 Score=297.77 Aligned_cols=189 Identities=30% Similarity=0.443 Sum_probs=153.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCC-CCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDN-HIGE 253 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 253 (1436)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 57999999999999999999999999999999999999887 9999999988754322 356899999974 4678
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM 333 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 333 (1436)
+||+||+.++....+.. . .+....++.+++.+||++..+. .
T Consensus 91 ~t~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~ 131 (211)
T cd03225 91 PTVEEEVAFGLENLGLP----------E------------------------EEIEERVEEALELVGLEGLRDR-----S 131 (211)
T ss_pred CcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCcHhhhcC-----C
Confidence 99999998754322100 0 0011234667889999765554 3
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++. +++|+.++|+.+++.+++|+|++|++
T Consensus 132 ~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 132 PFTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE--GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 457999999999998776 59999999999999999999999998653 45566678888899999999999999
Q ss_pred Ce
Q 038815 409 GL 410 (1436)
Q Consensus 409 G~ 410 (1436)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 288
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.3e-31 Score=308.39 Aligned_cols=200 Identities=24% Similarity=0.300 Sum_probs=165.3
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.++. +++.+|+|+|+.+++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 5788888876531 12469999999999999999999999999999999999865 3579999999876
Q ss_pred cc---ccccceEEEeccCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 946 KQ---ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
.. ..+++.+||++|++. .++.+||+||+.+..... ..+.++..+.++++++.++|.+..++.+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 42 235677999999963 566789999998764322 1233444567899999999988777763 57999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|++.. + +..|+
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~ 211 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADK 211 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCE
Confidence 9999999999999999999999999999999999999999999876 5899999999864 3 35676
No 289
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=1.4e-31 Score=294.76 Aligned_cols=178 Identities=44% Similarity=0.783 Sum_probs=150.2
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC--ccceEEEEcCCCCCCCC
Q 038815 176 KHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE--PQRVAAYISQHDNHIGE 253 (1436)
Q Consensus 176 ~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~ 253 (1436)
.++.+|+|+|+++++||+++|+|||||||||||++|+|.++|....+|+|.++|.++.... .++.++|++|++.+++.
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 97 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPT 97 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCC
Confidence 4567999999999999999999999999999999999999831123999999999876532 24579999999999999
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM 333 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 333 (1436)
+||+||+.++++.. .++.
T Consensus 98 ~tv~~~l~~~~~~~--------------------------------------------------------------~~~~ 115 (202)
T cd03233 98 LTVRETLDFALRCK--------------------------------------------------------------GNEF 115 (202)
T ss_pred CcHHHHHhhhhhhc--------------------------------------------------------------cccc
Confidence 99999998743110 1233
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
+..||||||||++||+++ +++|||||+|||+.++..+.+.++++.+..+.|+++++||+.+++.+++|++++|++
T Consensus 116 ~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~ 195 (202)
T cd03233 116 VRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE 195 (202)
T ss_pred hhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC
Confidence 457999999999998766 599999999999999999999999986544567778788888899999999999999
Q ss_pred CeEEEec
Q 038815 409 GLIVYLG 415 (1436)
Q Consensus 409 G~iv~~G 415 (1436)
|++++.|
T Consensus 196 G~i~~~g 202 (202)
T cd03233 196 GRQIYYG 202 (202)
T ss_pred CEEEecC
Confidence 9998765
No 290
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.6e-31 Score=308.57 Aligned_cols=199 Identities=26% Similarity=0.332 Sum_probs=164.9
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+. +++.+|+|||+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYS------------GSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeC------------CCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 56778877653 12359999999999999999999999999999999999865 45899999998653
Q ss_pred c---ccccceEEEeccCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 038815 947 Q---ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTE 1022 (1436)
Q Consensus 947 ~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1022 (1436)
. ...++.+|||+|++. .+...||.|++.+..... ..+.++..+.++++++.++|.+..++.+ +.||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 2 234567899999963 334579999998765322 2344445567889999999988777763 579999
Q ss_pred HHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1023 qrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+..|+
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~dr 207 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADY 207 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999875 899999999976 57777888
No 291
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=99.98 E-value=2.1e-31 Score=304.78 Aligned_cols=201 Identities=20% Similarity=0.253 Sum_probs=163.2
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~---~~~G~i~i~g 942 (1436)
.+.++|+++.+. ++.+|+|+|+.+++||++||+|||||||||||++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 367788877653 246999999999999999999999999999999999976432 2589999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 1013 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1013 (1436)
.+... ...++.+||++|+..+++.+||+||+.+....+. ..+.++.++.++++++.++|.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 86521 2345679999999989999999999988654331 1123344557889999999852 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1014 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1014 ~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~ 216 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQ 216 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCE
Confidence 467999999999999999999999999999999999999999999999864 689999999975 45666777
No 292
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.9e-31 Score=305.13 Aligned_cols=212 Identities=22% Similarity=0.294 Sum_probs=163.5
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEEcCccCCCC-----CccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSL--KVSGRVTYNGHNMDEF-----EPQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~ 242 (1436)
++..+++++.+|+|+|++|++||+++|+|||||||||||++|+|.+++.. ..+|+|.++|.++... ..++.++
T Consensus 17 ~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~ 96 (258)
T PRK14268 17 NLNLWYGEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVG 96 (258)
T ss_pred eeEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEE
Confidence 34444445679999999999999999999999999999999999987510 1399999999886432 1245699
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++.+++ +||+||+.|+.+..+.. .+ +....++.+++.+|+.
T Consensus 97 ~v~q~~~~~~-~tv~enl~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~ 141 (258)
T PRK14268 97 MVFQKPNPFP-MSIYDNVAYGPRIHGAN----------KK------------------------DLDGVVENALRSAALW 141 (258)
T ss_pred EEecCCccCc-ccHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCC
Confidence 9999988787 89999999865332110 00 0112345678888884
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
...... -+..++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.
T Consensus 142 ~~~~~~-~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~-~tiiivsH~~~~~~ 217 (258)
T PRK14268 142 DETSDR-LKSPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--D-YTIVIVTHNMQQAA 217 (258)
T ss_pred cchhhh-hcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHH
Confidence 211111 1234567999999999998776 4999999999999999999999998742 4 55566788888999
Q ss_pred hhcCeEEEecCCeEEEecChHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~ 420 (1436)
+++|+|++|++|++++.|+++++
T Consensus 218 ~~~d~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 218 RISDYTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred HhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999998776
No 293
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=99.98 E-value=2.6e-31 Score=312.51 Aligned_cols=214 Identities=21% Similarity=0.215 Sum_probs=169.4
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
-++++|++..++............+...+|+|||+.|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEEC
Confidence 57888998776532110000001123579999999999999999999999999999999999875 3579999999875
Q ss_pred ccc------cccceEEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 038815 946 KQE------TFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGV 1016 (1436)
Q Consensus 946 ~~~------~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 1016 (1436)
... .+++.++||+|+. .++|.+||.|++.+......+ ..+.++.++.++++++.++|. +..+.. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 321 2456799999997 578899999999886443221 234556667889999999995 344544 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1017 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1017 ~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
..|||||||||+||++|+.+|++|++||||+|||..++..|++.|+++.++ |.|||+++|++. .+.+.-|+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dr 231 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDR 231 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 689999999999999999999999999999999999999999999999764 999999999974 45556677
No 294
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=99.98 E-value=1.1e-31 Score=301.64 Aligned_cols=183 Identities=26% Similarity=0.356 Sum_probs=153.6
Q ss_pred eeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccccccceEEEeccCCCCCCCCCHHHHHH
Q 038815 895 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQETFTRISGYCEQNDIHSPLVTVYESLL 974 (1436)
Q Consensus 895 L~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~ 974 (1436)
|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|+..+++.+||+|++.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999865 35799999998654321 22489999999999999999998
Q ss_pred HhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHH
Q 038815 975 YSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1054 (1436)
Q Consensus 975 f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~ 1054 (1436)
+......+ ..+.++..+.++++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKR-----PGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 223344455688999999998777765 357999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1055 AIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1055 ~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 184 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDR 184 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 9999999998764 899999999985 56777887
No 295
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.4e-31 Score=307.22 Aligned_cols=203 Identities=27% Similarity=0.344 Sum_probs=165.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|++..+. ++.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 478888876552 2469999999999999999999999999999999999765 3579999999764
Q ss_pred cc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 946 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLP-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
.. ..+++.++|++|+..+++.+||.|++.+....... .........+.++++++.++|.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 23456799999998888889999999875321110 00111223456789999999987777664 57999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++.+..|+.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i 218 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYL 218 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 9999999999999999999999999999999999999999999765 899999999975 566777873
No 296
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=99.98 E-value=1.1e-31 Score=298.31 Aligned_cols=200 Identities=27% Similarity=0.397 Sum_probs=155.5
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCCCC-
Q 038815 173 TRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDNHI- 251 (1436)
Q Consensus 173 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~- 251 (1436)
.++++.++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++. ..++.++|++|++.+.
T Consensus 7 ~~~~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~ 81 (213)
T cd03235 7 VSYGGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVPQRRSIDR 81 (213)
T ss_pred eEECCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEecccccccc
Confidence 3334457999999999999999999999999999999999999887 999999998764 2345799999997653
Q ss_pred -CCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccccc
Q 038815 252 -GEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVG 330 (1436)
Q Consensus 252 -~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 330 (1436)
..+||+||+.++...... .+. . . . .+....++.+++.+||++..++.
T Consensus 82 ~~~~tv~e~l~~~~~~~~~--~~~---~-~------------~------------~~~~~~~~~~l~~~~l~~~~~~~-- 129 (213)
T cd03235 82 DFPISVRDVVLMGLYGHKG--LFR---R-L------------S------------KADKAKVDEALERVGLSELADRQ-- 129 (213)
T ss_pred CCCCcHHHHHHhccccccc--ccc---C-C------------C------------HHHHHHHHHHHHHcCCHHHHhCC--
Confidence 348999999885421100 000 0 0 0 00112356788999998655544
Q ss_pred CcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 038815 331 DEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 405 (1436)
Q Consensus 331 ~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vil 405 (1436)
+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++ . ++++|.++|+.+++.+++|+|++
T Consensus 130 ---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~ 204 (213)
T cd03235 130 ---IGELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLL 204 (213)
T ss_pred ---cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEE
Confidence 457999999999998766 5999999999999999999999999865 3 45566678888899999999999
Q ss_pred ecCCeEEEec
Q 038815 406 LSDGLIVYLG 415 (1436)
Q Consensus 406 L~~G~iv~~G 415 (1436)
|++| +++.|
T Consensus 205 l~~~-~~~~g 213 (213)
T cd03235 205 LNRT-VVASG 213 (213)
T ss_pred EcCc-EeecC
Confidence 9886 56554
No 297
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.8e-31 Score=302.25 Aligned_cols=201 Identities=24% Similarity=0.395 Sum_probs=162.6
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC---ccceEEEEcCCC
Q 038815 172 PTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE---PQRVAAYISQHD 248 (1436)
Q Consensus 172 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d 248 (1436)
..++++..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++
T Consensus 10 ~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~ 86 (241)
T PRK14250 10 SYSSFGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQP 86 (241)
T ss_pred EEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCc
Confidence 33444567999999999999999999999999999999999999887 999999998875432 245789999998
Q ss_pred CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc-ccccc
Q 038815 249 NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD-ICADT 327 (1436)
Q Consensus 249 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t 327 (1436)
.+++ .||+||+.+.....+ . ....++.+++.+||+ +..+
T Consensus 87 ~~~~-~tv~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~- 126 (241)
T PRK14250 87 HLFE-GTVKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYAT- 126 (241)
T ss_pred hhch-hhHHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhh-
Confidence 7776 699999987432110 0 001245678889996 3333
Q ss_pred cccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
+.+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+.+++.+++|+
T Consensus 127 ----~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tii~~sH~~~~~~~~~d~ 201 (241)
T PRK14250 127 ----RDVKNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMN-LTVIWITHNMEQAKRIGDY 201 (241)
T ss_pred ----CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCC-CEEEEEeccHHHHHHhCCE
Confidence 34567999999999998766 5999999999999999999999998765334 4556678888899999999
Q ss_pred EEEecCCeEEEecChHHH
Q 038815 403 IILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~ 420 (1436)
|++|++|+++..|+++++
T Consensus 202 i~~l~~G~i~~~~~~~~~ 219 (241)
T PRK14250 202 TAFLNKGILVEYAKTYDF 219 (241)
T ss_pred EEEEeCCEEEEeCCHHHH
Confidence 999999999999998775
No 298
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=2.1e-31 Score=307.56 Aligned_cols=201 Identities=24% Similarity=0.360 Sum_probs=164.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCC-CCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDN-HIGE 253 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 253 (1436)
..+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+..
T Consensus 17 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 93 (277)
T PRK13652 17 KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFS 93 (277)
T ss_pred CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCccccccc
Confidence 45999999999999999999999999999999999999987 9999999998754322 356899999963 3446
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM 333 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 333 (1436)
.||.||+.+.....+.. . .+....++.+++.+||.+..++.
T Consensus 94 ~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 134 (277)
T PRK13652 94 PTVEQDIAFGPINLGLD----------E------------------------ETVAHRVSSALHMLGLEELRDRV----- 134 (277)
T ss_pred ccHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCChhHhcCC-----
Confidence 89999998764322110 0 01122356789999998766654
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
++.||||||||++||+++ +++|||||+|||+.++..+.+.++++.+.. +++|+.++|+.+++.+.+|+|++|++
T Consensus 135 ~~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvli~tH~~~~~~~~~drv~~l~~ 213 (277)
T PRK13652 135 PHHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETY-GMTVIFSTHQLDLVPEMADYIYVMDK 213 (277)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 457999999999998776 599999999999999999999999986532 45566678888899999999999999
Q ss_pred CeEEEecChHHHH
Q 038815 409 GLIVYLGPRELVL 421 (1436)
Q Consensus 409 G~iv~~G~~~~~~ 421 (1436)
|++++.|+++++.
T Consensus 214 G~i~~~g~~~~~~ 226 (277)
T PRK13652 214 GRIVAYGTVEEIF 226 (277)
T ss_pred CeEEEECCHHHHh
Confidence 9999999998874
No 299
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=99.98 E-value=2.4e-31 Score=303.60 Aligned_cols=206 Identities=23% Similarity=0.304 Sum_probs=162.5
Q ss_pred CceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCC---CCeeEEEEEE
Q 038815 864 PHSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYITGSITI 940 (1436)
Q Consensus 864 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~---~~~~~G~i~i 940 (1436)
|..+.++|+++.+. ++.+|+|+|+.+++||+++|+|||||||||||++|+|... ..+.+|+|.+
T Consensus 4 ~~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 70 (253)
T PRK14242 4 PPKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILL 70 (253)
T ss_pred CcEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEE
Confidence 34688899987653 2469999999999999999999999999999999999642 1135799999
Q ss_pred cCeeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC
Q 038815 941 SGYLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPG 1015 (1436)
Q Consensus 941 ~g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1015 (1436)
+|.+... ...++.++|++|+..+++ .||+||+.+....+.. ...+...+.++++++.+++.+........ .
T Consensus 71 ~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~ 146 (253)
T PRK14242 71 DGENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLHE-S 146 (253)
T ss_pred CCEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhhC-C
Confidence 9986532 134567999999988887 5999999886543311 12233345678899999986422112211 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|++. ++-+..|+
T Consensus 147 ~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~ 217 (253)
T PRK14242 147 ALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDV 217 (253)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCE
Confidence 468999999999999999999999999999999999999999999999854 799999999975 45566777
No 300
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=99.98 E-value=2.1e-31 Score=305.84 Aligned_cols=208 Identities=24% Similarity=0.297 Sum_probs=163.9
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+......+ ..+++.+|+|+|+.+++||++||+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 56778877653210000 0113579999999999999999999999999999999999865 45799999998653
Q ss_pred cc------cccceEEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 038815 947 QE------TFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVS 1017 (1436)
Q Consensus 947 ~~------~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1017 (1436)
.. ..++.+||++|+. .+.+..||+|++.+..... ......+..+.++++++.++|. ...+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 21 1356799999996 4667899999997654321 1122334456688999999996 555654 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+. |.|||+++|++. .+.+..|+
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~ 220 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQR 220 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcE
Confidence 79999999999999999999999999999999999999999999998875 899999999975 45566777
No 301
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.98 E-value=5.4e-32 Score=286.79 Aligned_cols=212 Identities=22% Similarity=0.323 Sum_probs=182.9
Q ss_pred ccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCC
Q 038815 168 LQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQH 247 (1436)
Q Consensus 168 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~ 247 (1436)
++.++++..++.+++|+|+.++||+|++++|||||||||.+++|.|.++|+ +|+|+++|.+++... +..+||.|++
T Consensus 5 ie~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEE 80 (300)
T COG4152 5 IEGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEE 80 (300)
T ss_pred EecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhh
Confidence 345677888899999999999999999999999999999999999999998 999999999876543 3569999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
--++|.+||.|.|.|-++++|... +++....+.+|+.+++......
T Consensus 81 RGLy~k~tv~dql~yla~LkGm~~----------------------------------~e~~~~~~~wLer~~i~~~~~~ 126 (300)
T COG4152 81 RGLYPKMTVEDQLKYLAELKGMPK----------------------------------AEIQKKLQAWLERLEIVGKKTK 126 (300)
T ss_pred hccCccCcHHHHHHHHHHhcCCcH----------------------------------HHHHHHHHHHHHhccccccccc
Confidence 999999999999999999987532 1234456889999999876553
Q ss_pred cccCcccCCCCHHHHHHHhhh-----hhhhhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTG-----PALALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia-----~a~vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
.+..||.|.+|++-+- .|.+++||||+|||||.+++.+-+.++++.. .+++|+..+|-++.+.++||+
T Consensus 127 -----kIk~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~--~GatIifSsH~Me~vEeLCD~ 199 (300)
T COG4152 127 -----KIKELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKE--EGATIIFSSHRMEHVEELCDR 199 (300)
T ss_pred -----hHHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHh--cCCEEEEecchHHHHHHHhhh
Confidence 4567999999999883 4556999999999999999999999999865 355556678889999999999
Q ss_pred EEEecCCeEEEecChHHHHHHH
Q 038815 403 IILLSDGLIVYLGPRELVLDFF 424 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~~~F 424 (1436)
+++|++|+.|.+|+.++++.-|
T Consensus 200 llmL~kG~~V~~G~v~~ir~~~ 221 (300)
T COG4152 200 LLMLKKGQTVLYGTVEDIRRSF 221 (300)
T ss_pred hheecCCceEEeccHHHHHHhc
Confidence 9999999999999999998755
No 302
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.7e-31 Score=309.13 Aligned_cols=202 Identities=26% Similarity=0.321 Sum_probs=161.8
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.++... ...+.+|+|+|+.+++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 66788877653110 001359999999999999999999999999999999999865 35799999998653
Q ss_pred c-------ccccceEEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCC
Q 038815 947 Q-------ETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGV 1016 (1436)
Q Consensus 947 ~-------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 1016 (1436)
. ...++.+||++|+. .+++ .||+|++.+....+ ..+.++..+.++++++.++|.+ ..+.. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 23456799999986 3444 69999998764332 1233444556889999999973 45554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1017 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1017 ~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|++. ++.+..|+
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~ 214 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADF 214 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCE
Confidence 579999999999999999999999999999999999999999999999877999999999975 55566787
No 303
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.3e-31 Score=307.68 Aligned_cols=203 Identities=22% Similarity=0.272 Sum_probs=166.7
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.++ ++.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEh
Confidence 577888887653 3569999999999999999999999999999999999865 3579999999865
Q ss_pred cc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 946 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLP-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
.. ...++.+||++|+...++..||+|++.+...-..+ .....+...+.++++++.++|.+..++. ++.|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCCh
Confidence 32 23446799999999888889999999875211110 0011123345688999999998776765 467999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++.+..|+.
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i 214 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHL 214 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 9999999999999999999999999999999999999999999874 899999999986 577788873
No 304
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=2.9e-31 Score=298.80 Aligned_cols=187 Identities=29% Similarity=0.397 Sum_probs=159.4
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc-cccceEEEeccCCCCCCCCCHH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE-TFTRISGYCEQNDIHSPLVTVY 970 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~d~~~~~lTv~ 970 (1436)
+.+|+|+|+.++||++++|+|+||||||||+++|+|..+ +..|+|.++|.+.... ..++.+||++|+...++.+|++
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcceEEEecccccCCCCcHH
Confidence 469999999999999999999999999999999999865 3579999999865431 2346799999999988889999
Q ss_pred HHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCC
Q 038815 971 ESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1050 (1436)
Q Consensus 971 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD 1050 (1436)
|++.+....+. .......+.++++++.+|+.+..+..+ ..||+|||||++||++|+.+|++++|||||+|||
T Consensus 91 ~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~gLD 162 (232)
T cd03300 91 ENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQRVAIARALVNEPKVLLLDEPLGALD 162 (232)
T ss_pred HHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99987654432 223334456789999999988777653 6799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhhh
Q 038815 1051 ARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1051 ~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
+.++..+.+.|++++++ |+|||+++|++. ++.+..|+.
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i 201 (232)
T cd03300 163 LKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRI 201 (232)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEE
Confidence 99999999999998765 899999999984 467778883
No 305
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.7e-31 Score=302.55 Aligned_cols=204 Identities=23% Similarity=0.301 Sum_probs=161.1
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCC---CCCeeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~---~~~~~~G~i~i~g 942 (1436)
.++++|+++.+. .+.+|+|+|+.+++||+++|+||||||||||+++|+|.. +..+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 466788876542 256999999999999999999999999999999999952 2112479999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVS 1017 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1017 (1436)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...+...+.++++++.++|.+..+..... .+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLKE-SAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhhC-Ccc
Confidence 87532 234567999999988776 6999999876543311 12233345678999999986532111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+..|+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~ 214 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDK 214 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCE
Confidence 899999999999999999999999999999999999999999999985 4899999999986 46677888
No 306
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=3.3e-31 Score=298.39 Aligned_cols=206 Identities=27% Similarity=0.342 Sum_probs=167.5
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCCCCCC
Q 038815 173 TRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQHDNHI 251 (1436)
Q Consensus 173 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~ 251 (1436)
.+.+.+++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.+... ++.++|++|++..+
T Consensus 8 ~~~~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~ 84 (232)
T cd03300 8 KFYGGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALF 84 (232)
T ss_pred EEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccC
Confidence 3334457999999999999999999999999999999999999987 9999999998765332 46799999999999
Q ss_pred CCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccC
Q 038815 252 GEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGD 331 (1436)
Q Consensus 252 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 331 (1436)
+.+||+||+.++....+... ......++.+++.+||++..++.
T Consensus 85 ~~~t~~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~--- 127 (232)
T cd03300 85 PHLTVFENIAFGLRLKKLPK----------------------------------AEIKERVAEALDLVQLEGYANRK--- 127 (232)
T ss_pred CCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC---
Confidence 99999999988654321100 00112356788999998766644
Q ss_pred cccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 038815 332 EMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILL 406 (1436)
Q Consensus 332 ~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL 406 (1436)
+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++....+.| |+.++|...++.+++|++++|
T Consensus 128 --~~~lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~t-iii~sh~~~~~~~~~d~i~~l 204 (232)
T cd03300 128 --PSQLSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGIT-FVFVTHDQEEALTMSDRIAVM 204 (232)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHhcCEEEEE
Confidence 457999999999997766 599999999999999999999999986533444 455677788899999999999
Q ss_pred cCCeEEEecChHHHH
Q 038815 407 SDGLIVYLGPRELVL 421 (1436)
Q Consensus 407 ~~G~iv~~G~~~~~~ 421 (1436)
++|++++.|+.+++.
T Consensus 205 ~~G~~~~~~~~~~~~ 219 (232)
T cd03300 205 NKGKIQQIGTPEEIY 219 (232)
T ss_pred ECCEEEecCCHHHHH
Confidence 999999999877653
No 307
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.9e-31 Score=296.05 Aligned_cols=190 Identities=25% Similarity=0.352 Sum_probs=155.8
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 038815 183 DVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQHDNHIGEMTVRETLA 261 (1436)
Q Consensus 183 ~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 261 (1436)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999987 9999999998754432 357999999999999999999998
Q ss_pred hhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccCCCCHHH
Q 038815 262 FSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIRGISGGQ 341 (1436)
Q Consensus 262 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~rgLSGGq 341 (1436)
++..... . ..+ ..+..++.+++.+||++..++. +..|||||
T Consensus 93 ~~~~~~~-~--------~~~-------------------------~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~ 133 (211)
T cd03298 93 LGLSPGL-K--------LTA-------------------------EDRQAIEVALARVGLAGLEKRL-----PGELSGGE 133 (211)
T ss_pred ccccccc-C--------ccH-------------------------HHHHHHHHHHHHcCCHHHHhCC-----cccCCHHH
Confidence 7532110 0 000 0112356788999998766544 45799999
Q ss_pred HHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEec
Q 038815 342 KRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGLIVYLG 415 (1436)
Q Consensus 342 rkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~iv~~G 415 (1436)
||||+||+++ +++|||||+|||..++..+.+.|+++++.. +.+++.++|+..++.+++|++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAET-KMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999998766 599999999999999999999999886533 445555888899999999999999999998764
No 308
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.7e-31 Score=302.75 Aligned_cols=205 Identities=27% Similarity=0.318 Sum_probs=163.8
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCC------C---CccceEE
Q 038815 172 PTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDE------F---EPQRVAA 242 (1436)
Q Consensus 172 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~------~---~~~~~~~ 242 (1436)
..+++++.+|+|+|+++++||+++|+|||||||||||++|+|..+|+ +|+|.++|.++.. . ..++.++
T Consensus 9 ~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~ 85 (242)
T PRK11124 9 NCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVG 85 (242)
T ss_pred EEEECCeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheE
Confidence 33344457999999999999999999999999999999999999887 9999999987621 1 1135689
Q ss_pred EEcCCCCCCCCCCHHHHHHhhh-hhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCC
Q 038815 243 YISQHDNHIGEMTVRETLAFSA-RCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGL 321 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL 321 (1436)
|++|++.+++.+||.||+.+.. ...+.. . .+....++.+++.+||
T Consensus 86 ~~~q~~~~~~~~tv~e~i~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl 131 (242)
T PRK11124 86 MVFQQYNLWPHLTVQQNLIEAPCRVLGLS----------K------------------------DQALARAEKLLERLRL 131 (242)
T ss_pred EEecCccccCCCcHHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCC
Confidence 9999999999999999997532 111100 0 0011235678899999
Q ss_pred cccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 038815 322 DICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPET 396 (1436)
Q Consensus 322 ~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~ 396 (1436)
++..+.. ++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.. . +++++.++|+..++
T Consensus 132 ~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sh~~~~~ 204 (242)
T PRK11124 132 KPYADRF-----PLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-T-GITQVIVTHEVEVA 204 (242)
T ss_pred hhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHH
Confidence 8655543 457999999999998776 4999999999999999999999998754 3 44556678888899
Q ss_pred HhhcCeEEEecCCeEEEecChHHH
Q 038815 397 YDLFDDIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 397 ~~lfD~vilL~~G~iv~~G~~~~~ 420 (1436)
.+++|++++|++|++++.|+.++.
T Consensus 205 ~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 205 RKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHhcCEEEEEECCEEEEeCCHHHh
Confidence 999999999999999999987654
No 309
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=99.97 E-value=2.7e-31 Score=304.98 Aligned_cols=203 Identities=26% Similarity=0.346 Sum_probs=163.8
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc------cceEEEEcCCC--
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP------QRVAAYISQHD-- 248 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d-- 248 (1436)
++.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|+++|.++..... ++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 357999999999999999999999999999999999999987 9999999998764322 35699999986
Q ss_pred CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc-ccccc
Q 038815 249 NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD-ICADT 327 (1436)
Q Consensus 249 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t 327 (1436)
.+++.+||+||+.+...... .... .+....++.+++.+||+ +..+.
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~---------~~~~------------------------~~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLT---------SLDE------------------------SEQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhc---------CCCH------------------------HHHHHHHHHHHHHcCCChhhhhC
Confidence 46678999999987542110 0000 00112356788999995 44443
Q ss_pred cccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
.++.|||||||||+||+++ +|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+.+.+++|+
T Consensus 147 -----~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d~ 220 (265)
T TIGR02769 147 -----LPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAF-GTAYLFITHDLRLVQSFCQR 220 (265)
T ss_pred -----ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHHHhcE
Confidence 4567999999999998776 499999999999999999999999986533 45566678888999999999
Q ss_pred EEEecCCeEEEecChHHHH
Q 038815 403 IILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~ 421 (1436)
+++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999988764
No 310
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.8e-31 Score=303.04 Aligned_cols=213 Identities=25% Similarity=0.321 Sum_probs=162.9
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEEcCccCCCC-----CccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF-----EPQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~ 242 (1436)
++..+++++.+|+|+|+.|++||+++|+|||||||||||++|+|..+ +....+|+|.++|+++... ..++.++
T Consensus 11 ~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~ 90 (253)
T PRK14242 11 GLSFFYGDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVG 90 (253)
T ss_pred eeEEEECCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEE
Confidence 34444445679999999999999999999999999999999999864 1001389999999887531 1245799
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++.+++ .||+||+.++....+... +. .....++.+++.+||.
T Consensus 91 ~v~q~~~~~~-~tv~enl~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~ 136 (253)
T PRK14242 91 MVFQKPNPFP-KSIFENVAYGLRVNGVKD---------KA------------------------YLAERVERSLRHAALW 136 (253)
T ss_pred EEecCCCCCc-CcHHHHHHHHHHHcCCCC---------HH------------------------HHHHHHHHHHHHcCCc
Confidence 9999988887 599999998654322100 00 0112245677888885
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
+...+.. +..++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++.
T Consensus 137 ~~~~~~~-~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~tH~~~~~~ 212 (253)
T PRK14242 137 DEVKDRL-HESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA--R-YTIIIVTHNMQQAA 212 (253)
T ss_pred hhhhHHh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CeEEEEEecHHHHH
Confidence 4221111 345678999999999998766 5999999999999999999999998742 4 45556788888999
Q ss_pred hhcCeEEEecCCeEEEecChHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~ 420 (1436)
+++|+|++|++|++++.|+.+++
T Consensus 213 ~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 213 RVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999988765
No 311
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.1e-31 Score=305.79 Aligned_cols=212 Identities=24% Similarity=0.328 Sum_probs=167.3
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcC
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQ 246 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q 246 (1436)
++..+.+++++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|
T Consensus 16 ~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q 92 (265)
T PRK10575 16 NVSFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQ 92 (265)
T ss_pred eEEEEECCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEecc
Confidence 3444444567999999999999999999999999999999999999887 9999999988654322 356999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccc
Q 038815 247 HDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICAD 326 (1436)
Q Consensus 247 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 326 (1436)
+..+++.+||.||+.++..... +. . +. . . ......++.+++.+||++..+
T Consensus 93 ~~~~~~~~tv~e~l~~~~~~~~-~~-------~-------~~-~-~-------------~~~~~~~~~~l~~~~l~~~~~ 142 (265)
T PRK10575 93 QLPAAEGMTVRELVAIGRYPWH-GA-------L-------GR-F-G-------------AADREKVEEAISLVGLKPLAH 142 (265)
T ss_pred CCCCCCCccHHHHHHhCccccc-cc-------c-------cC-C-C-------------HHHHHHHHHHHHHcCCHHHhc
Confidence 9888899999999987532100 00 0 00 0 0 001123567889999976555
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
+. ++.|||||||||+||+++ +++|||||+|||..++..+.+.|+++++.. +++|+.++|+.+++.+++|
T Consensus 143 ~~-----~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~-~~tiii~sH~~~~i~~~~d 216 (265)
T PRK10575 143 RL-----VDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQER-GLTVIAVLHDINMAARYCD 216 (265)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCC
Confidence 54 457999999999998766 599999999999999999999999986533 4455667888889999999
Q ss_pred eEEEecCCeEEEecChHHH
Q 038815 402 DIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 402 ~vilL~~G~iv~~G~~~~~ 420 (1436)
+|++|++|++++.|+.+++
T Consensus 217 ~i~~l~~G~i~~~~~~~~~ 235 (265)
T PRK10575 217 YLVALRGGEMIAQGTPAEL 235 (265)
T ss_pred EEEEEECCeEEEecCHHHh
Confidence 9999999999999988765
No 312
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3e-31 Score=305.27 Aligned_cols=200 Identities=25% Similarity=0.313 Sum_probs=161.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC---ccceEEEEcCCCC-CCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE---PQRVAAYISQHDN-HIGE 253 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 253 (1436)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. +++.
T Consensus 22 ~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (269)
T PRK13648 22 SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVG 98 (269)
T ss_pred CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhccc
Confidence 45999999999999999999999999999999999999987 999999999875432 2457899999974 6888
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM 333 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 333 (1436)
.||++|+.|.....+.. . .+....++.+++.+||.+..+. .
T Consensus 99 ~~v~~~~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~ 139 (269)
T PRK13648 99 SIVKYDVAFGLENHAVP----------Y------------------------DEMHRRVSEALKQVDMLERADY-----E 139 (269)
T ss_pred ccHHHHHHhhHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhC-----C
Confidence 99999998864322110 0 0011235667899999876554 4
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+..+.| |+.++|+.+++.. +|+|++|++
T Consensus 140 ~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~t-iiivtH~~~~~~~-~d~i~~l~~ 217 (269)
T PRK13648 140 PNALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNIT-IISITHDLSEAME-ADHVIVMNK 217 (269)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCchHHhc-CCEEEEEEC
Confidence 567999999999998776 499999999999999999999999876533445 4556666777765 999999999
Q ss_pred CeEEEecChHHHH
Q 038815 409 GLIVYLGPRELVL 421 (1436)
Q Consensus 409 G~iv~~G~~~~~~ 421 (1436)
|++++.|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (269)
T PRK13648 218 GTVYKEGTPTEIF 230 (269)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 313
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.6e-31 Score=304.35 Aligned_cols=203 Identities=20% Similarity=0.261 Sum_probs=163.8
Q ss_pred CCceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEE
Q 038815 863 EPHSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGSIT 939 (1436)
Q Consensus 863 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~--~-~~~~G~i~ 939 (1436)
....+.++|+++.+. ++.+|+|+|+.|++||+++|+||||||||||+++|+|... + .+.+|+|.
T Consensus 10 ~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~ 76 (260)
T PRK10744 10 APSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEIL 76 (260)
T ss_pred CCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEE
Confidence 345688999987653 2469999999999999999999999999999999999753 1 13579999
Q ss_pred EcCeeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc----ccccc
Q 038815 940 ISGYLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP----LRQSL 1010 (1436)
Q Consensus 940 i~g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~ 1010 (1436)
++|.+... ..+++.++|++|+..+++ .||+||+.+....+. ..+.++..++++++++.+++.+ ..+..
T Consensus 77 ~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 153 (260)
T PRK10744 77 LDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS 153 (260)
T ss_pred ECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC
Confidence 99987531 234567999999988777 899999987654321 1233444567889999999853 23332
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1011 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1011 vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++.+ +.|||+++|++. ++.+..|+
T Consensus 154 -----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~ 224 (260)
T PRK10744 154 -----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ-DYTVVIVTHNMQ-QAARCSDY 224 (260)
T ss_pred -----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCE
Confidence 467999999999999999999999999999999999999999999999854 789999999975 45566777
No 314
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.3e-31 Score=304.39 Aligned_cols=209 Identities=22% Similarity=0.268 Sum_probs=167.2
Q ss_pred cCCCceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEE
Q 038815 861 PFEPHSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGS 937 (1436)
Q Consensus 861 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~---~~~~G~ 937 (1436)
|..+..+.++|+++.++ .+.+|+|||+.+++||++||+|||||||||||++|+|.... .+.+|+
T Consensus 15 ~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~ 81 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ 81 (267)
T ss_pred CCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE
Confidence 33455789999987653 25699999999999999999999999999999999997642 135899
Q ss_pred EEEcCeeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccC
Q 038815 938 ITISGYLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVG 1012 (1436)
Q Consensus 938 i~i~g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg 1012 (1436)
|.++|.+... ...++.++|++|+..+++ .||+||+.+..... .....++..+.++++++.++|.+..+...+
T Consensus 82 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 82 ILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred EEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 9999987532 124567999999988777 69999998864322 112333445668889999998643222222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1013 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1013 ~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
. .++.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++. ++.|||+++|++. ++.+..|+
T Consensus 159 ~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~ 231 (267)
T PRK14237 159 K-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDY 231 (267)
T ss_pred C-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCE
Confidence 2 256899999999999999999999999999999999999999999999985 4799999999986 57778888
No 315
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.3e-31 Score=303.88 Aligned_cols=210 Identities=23% Similarity=0.300 Sum_probs=163.0
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEEcCccCCCC-----CccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSL--KVSGRVTYNGHNMDEF-----EPQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~ 242 (1436)
++..++++..+|+|+|++|++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|.++... ..++.++
T Consensus 12 ~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~ 91 (254)
T PRK14273 12 NLNLFYTDFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIG 91 (254)
T ss_pred eeEEEeCCceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceE
Confidence 34444445679999999999999999999999999999999999988621 2389999999876421 1245799
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++..++ +||+||+.++....+... . .+....++..++.+|+.
T Consensus 92 ~v~q~~~~~~-~tv~eni~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~ 137 (254)
T PRK14273 92 MVFQTPNPFL-MSIYDNISYGPKIHGTKD---------K------------------------KKLDEIVEQSLKKSALW 137 (254)
T ss_pred EEeecccccc-CcHHHHHHHHHHhcCCCC---------H------------------------HHHHHHHHHHHHHhCCc
Confidence 9999987774 899999998643321100 0 00112345567777773
Q ss_pred ----ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCh
Q 038815 323 ----ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPA 393 (1436)
Q Consensus 323 ----~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~ 393 (1436)
+..++ .++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ + ++++.++|+.
T Consensus 138 ~~l~~~~~~-----~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~sH~~ 209 (254)
T PRK14273 138 NEVKDKLNT-----NALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE--S-YTIIIVTHNM 209 (254)
T ss_pred hhhHHHHhC-----CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEeCCH
Confidence 23333 4567999999999998776 4999999999999999999999999842 4 4555678888
Q ss_pred hhHHhhcCeEEEecCCeEEEecChHHHH
Q 038815 394 PETYDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 394 ~~~~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+++.+++|+|++|++|+++..|+.+++.
T Consensus 210 ~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 210 QQAGRISDRTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred HHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 8999999999999999999999988764
No 316
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.8e-31 Score=306.28 Aligned_cols=200 Identities=25% Similarity=0.329 Sum_probs=160.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC-------ccceEEEEcCCCC-
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE-------PQRVAAYISQHDN- 249 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~- 249 (1436)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 46999999999999999999999999999999999999987 999999998875421 2356899999862
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc-ccccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI-CADTL 328 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~ 328 (1436)
.+...||+||+.+.....+.. . .+....++.+++.+||.. ..+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-- 140 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVS----------Q------------------------EEAEALAREKLALVGISESLFE-- 140 (280)
T ss_pred hhccccHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhhh--
Confidence 333479999998864322110 0 001123466788899963 334
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
..++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+.+++.+++|++
T Consensus 141 ---~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 141 ---KNPFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred ---CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEE
Confidence 34567999999999998776 5999999999999999999999998764 3 445555778888999999999
Q ss_pred EEecCCeEEEecChHHHH
Q 038815 404 ILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~~ 421 (1436)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988763
No 317
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.1e-31 Score=305.89 Aligned_cols=213 Identities=22% Similarity=0.333 Sum_probs=168.8
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcC
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQ 246 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q 246 (1436)
++..+++++.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|
T Consensus 12 ~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q 88 (265)
T PRK10253 12 QLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQ 88 (265)
T ss_pred EEEEEECCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeec
Confidence 3444555567999999999999999999999999999999999999887 9999999998754332 356899999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccc
Q 038815 247 HDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICAD 326 (1436)
Q Consensus 247 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 326 (1436)
++..++.+||+||+.++..-.. + . .. ... ......++.+++.+||++..+
T Consensus 89 ~~~~~~~~tv~~~~~~~~~~~~-~----~---~~----------~~~------------~~~~~~~~~~l~~~~l~~~~~ 138 (265)
T PRK10253 89 NATTPGDITVQELVARGRYPHQ-P----L---FT----------RWR------------KEDEEAVTKAMQATGITHLAD 138 (265)
T ss_pred cCcCCCCCcHHHHHHhCccccc-c----c---cc----------CCC------------HHHHHHHHHHHHHcCCHHHhc
Confidence 9988899999999987521000 0 0 00 000 001123567889999976555
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
+ .++.||||||||++||+++ +++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|
T Consensus 139 ~-----~~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~-~~tiii~tH~~~~~~~~~d 212 (265)
T PRK10253 139 Q-----SVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREK-GYTLAAVLHDLNQACRYAS 212 (265)
T ss_pred C-----CcccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCC
Confidence 4 4567999999999998776 499999999999999999999999986533 4555667888889999999
Q ss_pred eEEEecCCeEEEecChHHHH
Q 038815 402 DIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 402 ~vilL~~G~iv~~G~~~~~~ 421 (1436)
+|++|++|++++.|+++++.
T Consensus 213 ~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 213 HLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999987754
No 318
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.6e-31 Score=307.88 Aligned_cols=198 Identities=23% Similarity=0.321 Sum_probs=161.7
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 45677776542 2459999999999999999999999999999999999765 35799999998753
Q ss_pred c-----ccccceEEEeccCCCC-CCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 038815 947 Q-----ETFTRISGYCEQNDIH-SPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLS 1020 (1436)
Q Consensus 947 ~-----~~~~~~~gyv~Q~d~~-~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1020 (1436)
. ...++.+||++|++.. ....|+.|++.+....+ ....++..+.++++++.++|.+..++. +..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCC
Confidence 1 1245679999998653 34568999998764332 123334445688999999998877765 35799
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|++. ++.+..|+
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~ 205 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDA 205 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999999877999999999975 45566777
No 319
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.9e-31 Score=303.65 Aligned_cols=199 Identities=25% Similarity=0.302 Sum_probs=161.3
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~---~~~~G~i~i~g 942 (1436)
.++++|+++.+. ++.+|+|+|+++++||++||+|+||||||||+++|+|..+. .+.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 578888877542 24699999999999999999999999999999999997642 13589999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 1013 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1013 (1436)
.+... ..+++.+||++|+..+++ .|++||+.+....+ ..+.++..+.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 76531 134567999999988877 89999998865432 1233344456888999999853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1014 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1014 ~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..|||||||||+||++|+.+|++|+|||||+|||..++..+++.|+++++ |+|||+++|++. ++.+..|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~ 222 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDY 222 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCE
Confidence 467999999999999999999999999999999999999999999999865 899999999975 34555676
No 320
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=4.3e-31 Score=304.64 Aligned_cols=200 Identities=28% Similarity=0.366 Sum_probs=162.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC--C---ccceEEEEcCCCC-CC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF--E---PQRVAAYISQHDN-HI 251 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~---~~~~~~yv~Q~d~-~~ 251 (1436)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++++ +|+|+++|.++... . .++.++|++|++. .+
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQL 91 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhh
Confidence 46999999999999999999999999999999999999987 99999999987421 1 2357999999863 34
Q ss_pred CCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccC
Q 038815 252 GEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGD 331 (1436)
Q Consensus 252 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 331 (1436)
..+||.||+.++....+. .+. +....+..+++.+||++..++.
T Consensus 92 ~~~tv~e~i~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~~L~~~~~~~--- 134 (275)
T PRK13639 92 FAPTVEEDVAFGPLNLGL----------SKE------------------------EVEKRVKEALKAVGMEGFENKP--- 134 (275)
T ss_pred ccccHHHHHHHHHHHcCC----------CHH------------------------HHHHHHHHHHHHCCCchhhcCC---
Confidence 457999999875321110 000 0112356688999998766654
Q ss_pred cccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 038815 332 EMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILL 406 (1436)
Q Consensus 332 ~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL 406 (1436)
++.||||||||++||+++ +++|||||+|||+.++.++.+.|+++.+ . +++|+.++|+.+++.++||++++|
T Consensus 135 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l 210 (275)
T PRK13639 135 --PHHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVM 210 (275)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEE
Confidence 457999999999998776 4999999999999999999999999865 3 455666788889999999999999
Q ss_pred cCCeEEEecChHHHH
Q 038815 407 SDGLIVYLGPRELVL 421 (1436)
Q Consensus 407 ~~G~iv~~G~~~~~~ 421 (1436)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 211 SDGKIIKEGTPKEVF 225 (275)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998764
No 321
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.97 E-value=1.7e-31 Score=300.48 Aligned_cols=183 Identities=27% Similarity=0.308 Sum_probs=151.7
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc----cccceEEEeccCCCCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE----TFTRISGYCEQNDIHSPLV 967 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d~~~~~l 967 (1436)
+.+|+|+|+.+++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|+..+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRL 90 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCC
Confidence 569999999999999999999999999999999999865 4579999999765321 1245799999999999999
Q ss_pred CHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcC-CCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCC
Q 038815 968 TVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVE-LNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1046 (1436)
Q Consensus 968 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPT 1046 (1436)
|++|++.+....+. .. ..+.++++++.++ +.+..+.. ++.||||||||++||++|+.+|++|+|||||
T Consensus 91 tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~illlDEPt 159 (230)
T TIGR03410 91 TVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGGQQQQLAIARALVTRPKLLLLDEPT 159 (230)
T ss_pred cHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 99999987654321 11 1234577788776 55555554 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1047 SGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1047 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+|||+.+...+.+.|++++++ |+|||+++|++. ++-+..|+
T Consensus 160 ~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 201 (230)
T TIGR03410 160 EGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADR 201 (230)
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999998874 899999999975 45556776
No 322
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=99.97 E-value=2e-31 Score=304.65 Aligned_cols=201 Identities=27% Similarity=0.376 Sum_probs=163.3
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.++ ++.+|+|+|+.++|||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 45667766542 3569999999999999999999999999999999999765 35799999997653
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 038815 947 Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLP-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTE 1022 (1436)
Q Consensus 947 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1022 (1436)
. ...++.++|++|+..+.+..||+|++.+....... ......+..+.++++++.+++.+..+..+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 2 23345699999998777889999999875211000 00111233456889999999987777653 579999
Q ss_pred HHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1023 qrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||++||++|+.+|++++|||||+|||+.+...+++.|+++.++|.|||+++|+++ ++.+..|+
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 206 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDH 206 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999877899999999986 56777887
No 323
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.1e-31 Score=306.67 Aligned_cols=200 Identities=27% Similarity=0.363 Sum_probs=161.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC----ccceEEEEcCCCC-CCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE----PQRVAAYISQHDN-HIG 252 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 252 (1436)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 56999999999999999999999999999999999999987 999999999875422 2467999999974 234
Q ss_pred CCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCc
Q 038815 253 EMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDE 332 (1436)
Q Consensus 253 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 332 (1436)
..||.|++.|+....+.. . .+....++.+++.+||++..++.+
T Consensus 100 ~~~v~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 142 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIP----------P------------------------EEIRERVDESLKKVGMYEYRRHAP--- 142 (280)
T ss_pred cccHHHHHHhhHhhcCCC----------H------------------------HHHHHHHHHHHHHCCCHhHhhCCc---
Confidence 579999999865332110 0 011223577899999987666554
Q ss_pred ccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.. +|++++|+
T Consensus 143 --~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 143 --HLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKY-GITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecChHHHhc-CCEEEEEE
Confidence 57999999999998766 599999999999999999999999986533 4445556777777765 99999999
Q ss_pred CCeEEEecChHHHH
Q 038815 408 DGLIVYLGPRELVL 421 (1436)
Q Consensus 408 ~G~iv~~G~~~~~~ 421 (1436)
+|++++.|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998874
No 324
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=99.97 E-value=2e-31 Score=305.79 Aligned_cols=204 Identities=27% Similarity=0.337 Sum_probs=164.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEEcCee
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGSITISGYL 944 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~-~~~G~i~i~g~~ 944 (1436)
-+.++|+++.+. ++.+|+|+|+.+++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 467788876542 356999999999999999999999999999999999986532 236999999976
Q ss_pred ccc--------ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCC-----CCCHHHHHHHHHHHHHHcCCCccccccc
Q 038815 945 KKQ--------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPP-----EVDSETRKMFIEEIMELVELNPLRQSLV 1011 (1436)
Q Consensus 945 ~~~--------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~-----~~~~~~~~~~v~~~l~~l~L~~~~~~~v 1011 (1436)
... ...++.++|++|+..+++.+||+|++.+......+. ....++....++++++.+||.+..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 123457999999998899999999998753211000 0112334457899999999987777653
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1012 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1012 g~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
..|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|++++++ |.|||+++|++. ++.+..|+
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~ 222 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCER 222 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 579999999999999999999999999999999999999999999999764 899999999985 35556676
No 325
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=99.97 E-value=2.2e-31 Score=295.88 Aligned_cols=184 Identities=25% Similarity=0.292 Sum_probs=154.0
Q ss_pred EeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc-ccccceEEEeccCCCCCCCCCHHHH
Q 038815 894 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ-ETFTRISGYCEQNDIHSPLVTVYES 972 (1436)
Q Consensus 894 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~E~ 972 (1436)
+++|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++.+|++||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 3579999999999999999999999999999999865 357999999986532 2345679999999999999999999
Q ss_pred HHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHH
Q 038815 973 LLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1052 (1436)
Q Consensus 973 l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~ 1052 (1436)
+.+....+. ... .+..+.++++++.++|.+..+.. ++.||||||||++||++|+.+|++++|||||+|||..
T Consensus 91 ~~~~~~~~~--~~~-~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KLN-AEQQEKVVDAAQQVGIADYLDRL-----PEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Ccc-HHHHHHHHHHHHHcCcHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 986532211 111 12345678899999998777765 3579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1053 AAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1053 ~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
++..+.+.|+++.++ |+|||+++|++. ++-+..|+
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~ 198 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQ 198 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCe
Confidence 999999999998764 899999999975 45566777
No 326
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=3.8e-31 Score=298.41 Aligned_cols=199 Identities=27% Similarity=0.436 Sum_probs=163.7
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCCCCCCCCCCHHH
Q 038815 180 ILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQHDNHIGEMTVRE 258 (1436)
Q Consensus 180 iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 258 (1436)
+|+|+|++|+|||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||.|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 899999999999999999999999999999999999987 9999999998765332 457999999999999999999
Q ss_pred HHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccCCCC
Q 038815 259 TLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIRGIS 338 (1436)
Q Consensus 259 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~rgLS 338 (1436)
|+.++....+.. . .+....++.+++.+||.+..++. ++.||
T Consensus 91 ~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVD----------K------------------------KEIERKVLEIAEMLGIDHLLNRK-----PETLS 131 (235)
T ss_pred HHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhHHhcC-----cccCC
Confidence 998764322100 0 00112345678889998766654 45799
Q ss_pred HHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEE
Q 038815 339 GGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGLIVY 413 (1436)
Q Consensus 339 GGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~iv~ 413 (1436)
|||||||+||+++ +++|||||+|||+.++..+.+.|++++...+. +++.++|..+++.+.+|+|++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~-tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGV-TVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCC-EEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 9999999998766 59999999999999999999999998653344 55557778888999999999999999999
Q ss_pred ecChHHHH
Q 038815 414 LGPRELVL 421 (1436)
Q Consensus 414 ~G~~~~~~ 421 (1436)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99887654
No 327
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.2e-31 Score=304.60 Aligned_cols=205 Identities=23% Similarity=0.257 Sum_probs=162.4
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~---~~~~G~i~i~g 942 (1436)
.+.++|+++.+. ++.+|+|+|+.|+|||+++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 688999987653 24699999999999999999999999999999999997542 13579999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVS 1017 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1017 (1436)
.+... ..+++.+||++|+...++. ||.||+.+....+.. ..+..+..+.++++++.++|.+........ .++
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHE-PGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhC-Ccc
Confidence 87532 2345679999999887774 999999887543321 112233345678999999996421111111 146
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ +.|||+++|++. .+-+..|+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~ 231 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQR 231 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCE
Confidence 7999999999999999999999999999999999999999999999865 789999999975 45556677
No 328
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.1e-31 Score=302.73 Aligned_cols=216 Identities=23% Similarity=0.313 Sum_probs=166.1
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCC--CCC---ccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMD--EFE---PQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~--~~~---~~~~~~ 242 (1436)
++..+++..++|+|+|++|++||+++|+||||||||||+++|+|.++|+ ...+|+|+++|+++. ... .++.++
T Consensus 9 ~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~ 88 (253)
T PRK14267 9 NLRVYYGSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVG 88 (253)
T ss_pred eEEEEeCCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhcee
Confidence 3444444567999999999999999999999999999999999998762 123899999999875 221 235799
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++.+++.+||.||+.++...++.... . .+....++.+++.+||.
T Consensus 89 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~ 136 (253)
T PRK14267 89 MVFQYPNPFPHLTIYDNVAIGVKLNGLVKS--------K------------------------KELDERVEWALKKAALW 136 (253)
T ss_pred EEecCCccCCCCcHHHHHHHHHHhcCccCC--------H------------------------HHHHHHHHHHHHHcCCc
Confidence 999999999999999999886532211000 0 00112245678888874
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
..... .-+..++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++ + .++|.++|+.+++.
T Consensus 137 ~~~~~-~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~ 212 (253)
T PRK14267 137 DEVKD-RLNDYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAA 212 (253)
T ss_pred cchhh-hhccChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHH
Confidence 31111 11345668999999999998776 4999999999999999999999999753 4 45566788888999
Q ss_pred hhcCeEEEecCCeEEEecChHHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+++|+|++|++|++++.|+.+++.
T Consensus 213 ~~~d~i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 213 RVSDYVAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred hhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999987763
No 329
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=4.1e-31 Score=305.76 Aligned_cols=203 Identities=27% Similarity=0.327 Sum_probs=162.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC---ccceEEEEcCCCC-CCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE---PQRVAAYISQHDN-HIGE 253 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 253 (1436)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+...+|+|+++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 46999999999999999999999999999999999999886112399999999875432 2357899999974 6778
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM 333 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 333 (1436)
+||+||+.|..+..+. .+ ++....++.+++.+||++..+. .
T Consensus 100 ~tv~enl~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~~L~~~~~~-----~ 140 (282)
T PRK13640 100 ATVGDDVAFGLENRAV----------PR------------------------PEMIKIVRDVLADVGMLDYIDS-----E 140 (282)
T ss_pred CCHHHHHHhhHHhCCC----------CH------------------------HHHHHHHHHHHHHCCChhHhcC-----C
Confidence 9999999885432211 00 0112235678899999865554 4
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++..+.| |+.++|..+++ ..+|++++|++
T Consensus 141 ~~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~t-vli~tH~~~~~-~~~d~i~~l~~ 218 (282)
T PRK13640 141 PANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLT-VISITHDIDEA-NMADQVLVLDD 218 (282)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHH-HhCCEEEEEEC
Confidence 568999999999998776 499999999999999999999999986533444 55566777777 57999999999
Q ss_pred CeEEEecChHHHH
Q 038815 409 GLIVYLGPRELVL 421 (1436)
Q Consensus 409 G~iv~~G~~~~~~ 421 (1436)
|++++.|+++++.
T Consensus 219 G~i~~~g~~~~~~ 231 (282)
T PRK13640 219 GKLLAQGSPVEIF 231 (282)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998764
No 330
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=99.97 E-value=2.6e-31 Score=298.59 Aligned_cols=196 Identities=28% Similarity=0.354 Sum_probs=158.3
Q ss_pred eeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCCCCCCCCHHHHH
Q 038815 181 LKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDNHIGEMTVRETL 260 (1436)
Q Consensus 181 L~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 260 (1436)
|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 58999999999999999999999999999999999887 9999999998765332 248999999999999999999
Q ss_pred HhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccCCCCHH
Q 038815 261 AFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIRGISGG 340 (1436)
Q Consensus 261 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~rgLSGG 340 (1436)
.++.+.... ...+ .+....++.+++.+||++..++. ++.||||
T Consensus 76 ~~~~~~~~~--------~~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLP--------DLSK------------------------SERRAIVEEHIALVGLTEAADKR-----PGQLSGG 118 (230)
T ss_pred HHHHHhccc--------CCCH------------------------HHHHHHHHHHHHHcCCHHHHcCC-----hhhCCHH
Confidence 875321000 0000 01122356788999998766554 4579999
Q ss_pred HHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEec
Q 038815 341 QKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGLIVYLG 415 (1436)
Q Consensus 341 qrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~iv~~G 415 (1436)
|||||+||+++ +++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHR-VTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 99999998766 5999999999999999999999998765434 45555788888999999999999999999988
Q ss_pred ChHH
Q 038815 416 PREL 419 (1436)
Q Consensus 416 ~~~~ 419 (1436)
+..+
T Consensus 198 ~~~~ 201 (230)
T TIGR01184 198 QILE 201 (230)
T ss_pred Ccee
Confidence 6544
No 331
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=99.97 E-value=2.8e-31 Score=290.40 Aligned_cols=178 Identities=48% Similarity=0.802 Sum_probs=151.6
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCC--CCCeeEEEEEEcCe
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYITGSITISGY 943 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~--~~~~~~G~i~i~g~ 943 (1436)
.+.++|+++.++.... ...+.+|+|+|+.+++||+++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~~-------~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSPS-------KSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCCC-------cccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 4678888877642100 01246999999999999999999999999999999999986 4 46899999998
Q ss_pred ecccccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 038815 944 LKKQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQ 1023 (1436)
Q Consensus 944 ~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1023 (1436)
+......++.++|++|++.+++.+|++|++.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 7654445678999999998888999999997642110 499999
Q ss_pred HHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhh
Q 038815 1024 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1024 rkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
|||++||++|+.+|++++|||||+|||..++..+.+.|+++.++|+|||+++|++..++.+..|+.
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v 182 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKL 182 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEE
Confidence 999999999999999999999999999999999999999988779999999999987888888873
No 332
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.6e-31 Score=306.03 Aligned_cols=201 Identities=26% Similarity=0.356 Sum_probs=161.4
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC---ccceEEEEcCCCC-CCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE---PQRVAAYISQHDN-HIG 252 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~ 252 (1436)
++++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++
T Consensus 21 ~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~ 97 (271)
T PRK13632 21 ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFI 97 (271)
T ss_pred CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcC
Confidence 457999999999999999999999999999999999999987 999999999875432 2457899999963 677
Q ss_pred CCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCc
Q 038815 253 EMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDE 332 (1436)
Q Consensus 253 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 332 (1436)
.+||+||+.++....+.. . .+....++++++.+||++..++.
T Consensus 98 ~~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~---- 139 (271)
T PRK13632 98 GATVEDDIAFGLENKKVP----------P------------------------KKMKDIIDDLAKKVGMEDYLDKE---- 139 (271)
T ss_pred cccHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHHHhhCC----
Confidence 899999998864321100 0 01122356788999998766654
Q ss_pred ccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
++.||||||||++||+++ +++|||||+|||+.++..+.+.|+++.+. ++++++.++|..+++. .+|++++|+
T Consensus 140 -~~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~ 216 (271)
T PRK13632 140 -PQNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFS 216 (271)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEE
Confidence 457999999999998776 49999999999999999999999998653 3344444566666664 799999999
Q ss_pred CCeEEEecChHHHH
Q 038815 408 DGLIVYLGPRELVL 421 (1436)
Q Consensus 408 ~G~iv~~G~~~~~~ 421 (1436)
+|++++.|+.+++.
T Consensus 217 ~G~i~~~g~~~~~~ 230 (271)
T PRK13632 217 EGKLIAQGKPKEIL 230 (271)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987753
No 333
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.7e-31 Score=306.33 Aligned_cols=199 Identities=28% Similarity=0.328 Sum_probs=163.3
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+. +++.+|+|||+++++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 45777776542 12459999999999999999999999999999999999765 35799999998753
Q ss_pred c-----ccccceEEEeccCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 038815 947 Q-----ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLS 1020 (1436)
Q Consensus 947 ~-----~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1020 (1436)
. ...++.+||++|+.. .+...||.|++.+..... ....++..+.+.++++.++|.+..+..+ +.||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 124567999999963 233479999998753321 1234445567889999999988877763 5799
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|.|||+++|++. ++.+..|+
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~ 206 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADK 206 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999999877999999999965 56677887
No 334
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.6e-31 Score=303.62 Aligned_cols=210 Identities=26% Similarity=0.368 Sum_probs=166.4
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCC
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQH 247 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~ 247 (1436)
+..+++++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|+
T Consensus 8 l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~ 84 (255)
T PRK11231 8 LTVGYGTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQH 84 (255)
T ss_pred EEEEECCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEeccc
Confidence 344445567999999999999999999999999999999999999887 9999999987654322 3568999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
...++.+||.||+.++..... ..+. .. + .+....++.+++.+||++..++
T Consensus 85 ~~~~~~~tv~~~i~~~~~~~~--~~~~---~~----------~---------------~~~~~~~~~~l~~~~l~~~~~~ 134 (255)
T PRK11231 85 HLTPEGITVRELVAYGRSPWL--SLWG---RL----------S---------------AEDNARVNQAMEQTRINHLADR 134 (255)
T ss_pred CCCCCCccHHHHHHhccchhh--hhcc---CC----------C---------------HHHHHHHHHHHHHcCCHHHHcC
Confidence 888888999999988531000 0000 00 0 0011235678889999876665
Q ss_pred cccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
. ++.|||||||||+||+++ +++|||||+|||+.+...+.+.|+++.. . +++++.++|+.+++.+++|+
T Consensus 135 ~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~-~~tiii~tH~~~~~~~~~d~ 207 (255)
T PRK11231 135 R-----LTDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-Q-GKTVVTVLHDLNQASRYCDH 207 (255)
T ss_pred C-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEECCHHHHHHhcCE
Confidence 4 457999999999998776 5999999999999999999999998754 3 44556678888899999999
Q ss_pred EEEecCCeEEEecChHHH
Q 038815 403 IILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~ 420 (1436)
+++|++|++++.|+.+++
T Consensus 208 i~~l~~G~i~~~~~~~~~ 225 (255)
T PRK11231 208 LVVLANGHVMAQGTPEEV 225 (255)
T ss_pred EEEEECCeEEEEcCHHHh
Confidence 999999999999988765
No 335
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=1.7e-31 Score=284.63 Aligned_cols=187 Identities=29% Similarity=0.400 Sum_probs=153.3
Q ss_pred CceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc----ccccceEEEeccCCCCCC
Q 038815 890 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ----ETFTRISGYCEQNDIHSP 965 (1436)
Q Consensus 890 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d~~~~ 965 (1436)
++.++|+|||+.+++||+++|+|+|||||||||++|+|..+ ..+|+|.++|.++.. ...++-++||||....||
T Consensus 14 G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~ 91 (237)
T COG0410 14 GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFP 91 (237)
T ss_pred cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecCCCCHHHHHhCCeEeCcccccchh
Confidence 45789999999999999999999999999999999999876 347999999987653 235567999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHc-CCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecC
Q 038815 966 LVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELV-ELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1044 (1436)
Q Consensus 966 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDE 1044 (1436)
.+||+|||..++..+.. ++.....++++.+++ .|.+.++...| .|||||||-++|||||+++|++|+|||
T Consensus 92 ~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSGGEQQMLAiaRALm~~PklLLLDE 162 (237)
T COG0410 92 RLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSGGEQQMLAIARALMSRPKLLLLDE 162 (237)
T ss_pred hCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCChHHHHHHHHHHHHhcCCCEEEecC
Confidence 99999999987655432 111222267777776 36666676654 599999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1045 PTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1045 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||.||-+.-...|.++|+++.++ |.||+.+-+.- ....+.=|+
T Consensus 163 Ps~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~-~~Al~iaDr 206 (237)
T COG0410 163 PSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNA-RFALEIADR 206 (237)
T ss_pred CccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccH-HHHHHhhCE
Confidence 99999999999999999999976 66888887653 334444555
No 336
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=99.97 E-value=4.3e-31 Score=296.78 Aligned_cols=193 Identities=26% Similarity=0.334 Sum_probs=155.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-------cceEEEEcCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-------QRVAAYISQHDNH 250 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 250 (1436)
..+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l 99 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFML 99 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEccccc
Confidence 35999999999999999999999999999999999999887 9999999998765432 2469999999989
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVG 330 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 330 (1436)
++.+||.||+.+....++.. . .+....++.+++.+||.+..+..
T Consensus 100 ~~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-- 143 (228)
T PRK10584 100 IPTLNALENVELPALLRGES----------S------------------------RQSRNGAKALLEQLGLGKRLDHL-- 143 (228)
T ss_pred CCCcCHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhhCC--
Confidence 99999999998754322100 0 00122356788999998765544
Q ss_pred CcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 038815 331 DEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 405 (1436)
Q Consensus 331 ~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vil 405 (1436)
+..||||||||++||+++ +++|||||+|||+.++..+.+.|++++...+.|+| .++|+.+++ +.+|++++
T Consensus 144 ---~~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii-~~sH~~~~~-~~~d~i~~ 218 (228)
T PRK10584 144 ---PAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLI-LVTHDLQLA-ARCDRRLR 218 (228)
T ss_pred ---hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEE-EEecCHHHH-HhCCEEEE
Confidence 457999999999998766 59999999999999999999999998654344544 466776676 55999999
Q ss_pred ecCCeEEEe
Q 038815 406 LSDGLIVYL 414 (1436)
Q Consensus 406 L~~G~iv~~ 414 (1436)
|++|++++.
T Consensus 219 l~~g~i~~~ 227 (228)
T PRK10584 219 LVNGQLQEE 227 (228)
T ss_pred EECCEEEec
Confidence 999999753
No 337
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=99.97 E-value=2.9e-31 Score=304.33 Aligned_cols=219 Identities=23% Similarity=0.291 Sum_probs=168.5
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC--------ccceE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE--------PQRVA 241 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--------~~~~~ 241 (1436)
++..+++++++|+|+|+++++||+++|+|||||||||||++|+|.++|+...+|+|.++|.++.... .++.+
T Consensus 9 nl~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i 88 (262)
T PRK09984 9 KLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANT 88 (262)
T ss_pred eEEEEeCCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhhe
Confidence 3444445567999999999999999999999999999999999999875223699999998864321 13468
Q ss_pred EEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCC
Q 038815 242 AYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGL 321 (1436)
Q Consensus 242 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL 321 (1436)
+|++|++.+++.+||+||+.+....... ...+. ... ...+....++.+++.+||
T Consensus 89 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~---------~~~~~----~~~-------------~~~~~~~~~~~~l~~~~l 142 (262)
T PRK09984 89 GYIFQQFNLVNRLSVLENVLIGALGSTP---------FWRTC----FSW-------------FTREQKQRALQALTRVGM 142 (262)
T ss_pred EEEccccccccCCcHHHHHHhhhccccc---------chhhh----ccc-------------ccHHHHHHHHHHHHHcCC
Confidence 9999999899999999999875321000 00000 000 000112345678999999
Q ss_pred cccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 038815 322 DICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPET 396 (1436)
Q Consensus 322 ~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~ 396 (1436)
++..+.. +..|||||||||+||+++ +++|||||+|||..++..+.+.|+++++.. +++||.++|+.+++
T Consensus 143 ~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~tH~~~~~ 216 (262)
T PRK09984 143 VHFAHQR-----VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GITVVVTLHQVDYA 216 (262)
T ss_pred HHHHhCC-----ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHH
Confidence 8766554 457999999999998766 599999999999999999999999986533 45666678888889
Q ss_pred HhhcCeEEEecCCeEEEecChHHH
Q 038815 397 YDLFDDIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 397 ~~lfD~vilL~~G~iv~~G~~~~~ 420 (1436)
.+++|+|++|++|++++.|+.++.
T Consensus 217 ~~~~d~i~~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 217 LRYCERIVALRQGHVFYDGSSQQF 240 (262)
T ss_pred HHhCCEEEEEECCEEEEeCCHHHh
Confidence 999999999999999999987653
No 338
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=99.97 E-value=4e-31 Score=297.34 Aligned_cols=202 Identities=24% Similarity=0.293 Sum_probs=161.0
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC----CCCcccEEEEcCccCCCCCc-cceEEEEcCCCC--CCC
Q 038815 180 ILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDS----SLKVSGRVTYNGHNMDEFEP-QRVAAYISQHDN--HIG 252 (1436)
Q Consensus 180 iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~----~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 252 (1436)
+|+|+|+++++|++++|+|||||||||||++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999987 5 9999999998754433 257999999974 557
Q ss_pred CCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCc
Q 038815 253 EMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDE 332 (1436)
Q Consensus 253 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 332 (1436)
.+|+.|++.+.....+.. . .+....++.+++.+||++. +...+.
T Consensus 78 ~~t~~~~~~~~~~~~~~~---------~-------------------------~~~~~~~~~~l~~~~l~~~--~~~~~~ 121 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKL---------S-------------------------KQARALILEALEAVGLPDP--EEVLKK 121 (230)
T ss_pred ccCHHHHHHHHHHHcCcc---------H-------------------------HHHHHHHHHHHHHcCCCch--HHHHhC
Confidence 789999998754321100 0 0012235678999999732 011234
Q ss_pred ccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
.+..|||||||||+||+++ +++|||||+|||..+...+.+.|+++.+. .+++|+.++|..+++..++|+|++|+
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQL-FGTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 5567999999999998766 59999999999999999999999987653 34555567888889999999999999
Q ss_pred CCeEEEecChHHHH
Q 038815 408 DGLIVYLGPRELVL 421 (1436)
Q Consensus 408 ~G~iv~~G~~~~~~ 421 (1436)
+|+++..|+.+++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999987764
No 339
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=99.97 E-value=5e-31 Score=297.80 Aligned_cols=205 Identities=28% Similarity=0.413 Sum_probs=165.9
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCCCCCCC
Q 038815 174 RKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQHDNHIG 252 (1436)
Q Consensus 174 ~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~ 252 (1436)
+++.+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++..++
T Consensus 9 ~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~ 85 (237)
T TIGR00968 9 RFGSFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFK 85 (237)
T ss_pred EECCeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhcc
Confidence 334457999999999999999999999999999999999999887 9999999998764433 357999999998899
Q ss_pred CCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCc
Q 038815 253 EMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDE 332 (1436)
Q Consensus 253 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 332 (1436)
.+|+.||+.+....++.. .. .....++.+++.+|+....++.
T Consensus 86 ~~t~~enl~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~---- 127 (237)
T TIGR00968 86 HLTVRDNIAFGLEIRKHP----------KA------------------------KIKARVEELLELVQLEGLGDRY---- 127 (237)
T ss_pred CCcHHHHHHhHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCHhHhhCC----
Confidence 999999998764332110 00 0112246678889997655543
Q ss_pred ccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
++.||||||||++|++++ +++|||||+|||..+...+.+.|++.+.. .+.+++.++|...++.+++|+|++|+
T Consensus 128 -~~~lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~-~~~tvli~sH~~~~~~~~~d~i~~l~ 205 (237)
T TIGR00968 128 -PNQLSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDE-VHVTTVFVTHDQEEAMEVADRIVVMS 205 (237)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCEEEEEE
Confidence 457999999999997765 59999999999999999999999987653 23445556777788899999999999
Q ss_pred CCeEEEecChHHHH
Q 038815 408 DGLIVYLGPRELVL 421 (1436)
Q Consensus 408 ~G~iv~~G~~~~~~ 421 (1436)
+|++++.|+.+++.
T Consensus 206 ~g~i~~~~~~~~~~ 219 (237)
T TIGR00968 206 NGKIEQIGSPDEVY 219 (237)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999988764
No 340
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=99.97 E-value=3.7e-31 Score=302.51 Aligned_cols=209 Identities=29% Similarity=0.385 Sum_probs=165.6
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCC
Q 038815 172 PTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHD 248 (1436)
Q Consensus 172 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d 248 (1436)
..+.++..+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 8 ~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~ 84 (256)
T TIGR03873 8 SWSAGGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDS 84 (256)
T ss_pred EEEECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccC
Confidence 33444567999999999999999999999999999999999999887 9999999998765432 34689999998
Q ss_pred CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccc
Q 038815 249 NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTL 328 (1436)
Q Consensus 249 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 328 (1436)
.+++.+||+||+.++..... ... .. + ..+....++.+++.+||.+..++.
T Consensus 85 ~~~~~~tv~e~l~~~~~~~~---------~~~------~~-~--------------~~~~~~~~~~~l~~~~l~~~~~~~ 134 (256)
T TIGR03873 85 DTAVPLTVRDVVALGRIPHR---------SLW------AG-D--------------SPHDAAVVDRALARTELSHLADRD 134 (256)
T ss_pred ccCCCCCHHHHHHhcchhhh---------hhc------cC-C--------------CHHHHHHHHHHHHHcCcHhhhcCC
Confidence 78888999999987521000 000 00 0 000112346678889997655544
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
+..|||||||||+||+++ +++|||||+|||+.+...+.+.|+++.. . +++|+.++|+.+++.+++|+|
T Consensus 135 -----~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i 207 (256)
T TIGR03873 135 -----MSTLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-T-GVTVVAALHDLNLAASYCDHV 207 (256)
T ss_pred -----cccCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhCCEE
Confidence 457999999999998766 5999999999999999999999998754 3 455666788888999999999
Q ss_pred EEecCCeEEEecChHHH
Q 038815 404 ILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~ 420 (1436)
++|++|++++.|+.+++
T Consensus 208 ~~l~~G~i~~~g~~~~~ 224 (256)
T TIGR03873 208 VVLDGGRVVAAGPPREV 224 (256)
T ss_pred EEEeCCCEEEecCHHHh
Confidence 99999999999988765
No 341
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.9e-31 Score=303.82 Aligned_cols=216 Identities=23% Similarity=0.324 Sum_probs=165.5
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCC-----CccceE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----EPQRVA 241 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~ 241 (1436)
.++..+++++.+|+|+|+.|+||++++|+|||||||||||++|+|.++|. ...+|+|+++|+++... ..++.+
T Consensus 23 ~nl~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i 102 (267)
T PRK14235 23 RDVSVFYGEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARV 102 (267)
T ss_pred EeEEEEECCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhce
Confidence 34444445567999999999999999999999999999999999998741 11389999999887531 124578
Q ss_pred EEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCC
Q 038815 242 AYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGL 321 (1436)
Q Consensus 242 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL 321 (1436)
+|++|++..++. ||.||+.++.+.++... .+ .+....++.+++.+||
T Consensus 103 ~~v~q~~~~~~~-tv~enl~~~~~~~~~~~--------~~------------------------~~~~~~~~~~l~~~~l 149 (267)
T PRK14235 103 GMVFQKPNPFPK-SIYENVAYGPRIHGLAR--------SK------------------------AELDEIVETSLRKAGL 149 (267)
T ss_pred EEEecCCCCCCC-cHHHHHHHHHHhccccc--------ch------------------------HHHHHHHHHHHHHcCC
Confidence 999999888875 99999998654322100 00 0011234667888998
Q ss_pred cccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 038815 322 DICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPET 396 (1436)
Q Consensus 322 ~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~ 396 (1436)
.+...... +..++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+.+++
T Consensus 150 ~~~~~~~~-~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~ 225 (267)
T PRK14235 150 WEEVKDRL-HEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQA 225 (267)
T ss_pred chhhhHHh-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHH
Confidence 64211111 244668999999999998777 4999999999999999999999998753 4 4555577888899
Q ss_pred HhhcCeEEEecCCeEEEecChHHHH
Q 038815 397 YDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 397 ~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
.+++|++++|++|+++.+|+.+++.
T Consensus 226 ~~~~d~v~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 226 ARVSQRTAFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred HhhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999887753
No 342
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.6e-31 Score=311.32 Aligned_cols=215 Identities=18% Similarity=0.175 Sum_probs=167.0
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-CCcccEEEEcCccCCCCCc-------cceEEEEcCC
Q 038815 176 KHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS-LKVSGRVTYNGHNMDEFEP-------QRVAAYISQH 247 (1436)
Q Consensus 176 ~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~ 247 (1436)
....+|+|||++|++||+++|+|+||||||||+++|+|.+++. ...+|+|.++|.++..... ++.++||+|+
T Consensus 18 ~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~ 97 (330)
T PRK15093 18 GWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQE 97 (330)
T ss_pred CCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecC
Confidence 3457999999999999999999999999999999999998642 1238999999998765432 2369999999
Q ss_pred CC--CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccc
Q 038815 248 DN--HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICA 325 (1436)
Q Consensus 248 d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 325 (1436)
+. +.|.+||.+++.+........... ..+ ..+....+..+|+.+||++..
T Consensus 98 ~~~~l~p~~tv~~~l~~~~~~~~~~~~~-----~~~-----------------------~~~~~~~~~~~L~~~gL~~~~ 149 (330)
T PRK15093 98 PQSCLDPSERVGRQLMQNIPGWTYKGRW-----WQR-----------------------FGWRKRRAIELLHRVGIKDHK 149 (330)
T ss_pred cchhcCccccHHHHHHHHHHhhhccccc-----ccc-----------------------HHHHHHHHHHHHHHCCCCChH
Confidence 75 678899999997643211000000 000 001123356789999997532
Q ss_pred cccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 038815 326 DTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLF 400 (1436)
Q Consensus 326 ~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lf 400 (1436)
+ +.+..+..|||||||||+||+|+ +|++||||+|||+.++.++.+.|+++.+.. +++++.++|+...+.+++
T Consensus 150 ~--~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-g~tii~itHdl~~v~~~~ 226 (330)
T PRK15093 150 D--AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNN-NTTILLISHDLQMLSQWA 226 (330)
T ss_pred H--HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhC
Confidence 2 22456778999999999998877 499999999999999999999999986533 456666899999999999
Q ss_pred CeEEEecCCeEEEecChHHHH
Q 038815 401 DDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 401 D~vilL~~G~iv~~G~~~~~~ 421 (1436)
|+|++|++|++++.|+.+++.
T Consensus 227 dri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 227 DKINVLYCGQTVETAPSKELV 247 (330)
T ss_pred CEEEEEECCEEEEECCHHHHH
Confidence 999999999999999988764
No 343
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=2.1e-31 Score=308.06 Aligned_cols=180 Identities=22% Similarity=0.263 Sum_probs=134.3
Q ss_pred CCceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcC
Q 038815 863 EPHSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISG 942 (1436)
Q Consensus 863 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g 942 (1436)
.+..+.+.++.+.+. | +.-+++.+++..++.-...+++|+||+||||+++++.|..+ +..|.+.+++
T Consensus 359 ~~p~l~i~~V~f~y~-p----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYT-P----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCC-C----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc
Confidence 345677777775543 1 11268899999999999999999999999999999998654 2456666655
Q ss_pred eecccccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCH
Q 038815 943 YLKKQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPL-RQSLVGLPGVSGLST 1021 (1436)
Q Consensus 943 ~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~lSg 1021 (1436)
++.++|-.|..+-+-.+.|-+ +.+...++ |.. ..+ ..++-+..+||..- +.. .+.+|||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~-vd~~~~~~-pG~-~~e----e~r~hl~~~Gl~g~la~~-----si~~LSG 485 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNA-VDFMEKSF-PGK-TEE----EIRRHLGSFGLSGELALQ-----SIASLSG 485 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHH-HHHHHHhC-CCC-CHH----HHHHHHHhcCCCchhhhc-----cccccCC
Confidence 356889899765443344433 33434443 222 222 24566788888752 221 2568999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCC
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQP 1078 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp 1078 (1436)
|||-||++|.....+|.+|+|||||+.||..+-..+.++|++. +..||+++|+.
T Consensus 486 GQKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~ 539 (582)
T KOG0062|consen 486 GQKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDE 539 (582)
T ss_pred cchhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcH
Confidence 9999999999999999999999999999999999999999887 56899999984
No 344
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.7e-31 Score=332.38 Aligned_cols=204 Identities=21% Similarity=0.284 Sum_probs=168.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+. ++.+|+|||+.+++||+++|+||||||||||+++|+|..++++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 377888877652 3569999999999999999999999999999999999865433589999999875
Q ss_pred ccc----cccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 946 KQE----TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 946 ~~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
... ..++.+|||+|+..+++.+||+|++.+....+.....+.++..+.++++++.++|.+..+..+ +.|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 422 124569999999988899999999988654321111223344556889999999988777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++|.|||+++|++. ++.+..|+
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~ 212 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDT 212 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCE
Confidence 9999999999999999999999999999999999999999999878999999999975 45566777
No 345
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.3e-31 Score=299.38 Aligned_cols=214 Identities=21% Similarity=0.290 Sum_probs=164.6
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCC
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQH 247 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~ 247 (1436)
+..+++.+.+|+|+|+++++||+++|+||||||||||+++|+|.+++....+|+|+++|+++..... ++.++|++|+
T Consensus 8 l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~ 87 (246)
T PRK14269 8 LNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQ 87 (246)
T ss_pred eEEEECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecC
Confidence 3344445679999999999999999999999999999999999975311239999999998765422 4579999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
+.+++ .||+||+.++...++.... . ......++.+++.+||......
T Consensus 88 ~~l~~-~tv~eni~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~ 134 (246)
T PRK14269 88 PNVFV-KSIYENISYAPKLHGMIKN--------K------------------------DEEEALVVDCLQKVGLFEEVKD 134 (246)
T ss_pred Ccccc-ccHHHHhhhHHhhcCcccC--------h------------------------HHHHHHHHHHHHHcCCChhhhH
Confidence 88887 6999999886433211000 0 0011224567888998532111
Q ss_pred cccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
.. ++.++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ + ++++.++|+.+++.+++|+
T Consensus 135 ~~-~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~ 210 (246)
T PRK14269 135 KL-KQNALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH--N-LSMIMVTHNMQQGKRVADY 210 (246)
T ss_pred Hh-cCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEecCHHHHHhhCcE
Confidence 11 345678999999999998776 4999999999999999999999998742 4 4566678888899999999
Q ss_pred EEEecCCeEEEecChHHHH
Q 038815 403 IILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~ 421 (1436)
|++|++|++++.|+.+++.
T Consensus 211 i~~l~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 211 TAFFHLGELIEFGESKEFF 229 (246)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999987753
No 346
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=99.97 E-value=2.1e-31 Score=296.25 Aligned_cols=195 Identities=24% Similarity=0.366 Sum_probs=156.9
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC-----CccceEEEEcCC
Q 038815 173 TRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-----EPQRVAAYISQH 247 (1436)
Q Consensus 173 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~ 247 (1436)
.+++.+.+|+|+|++++||++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|+
T Consensus 8 ~~~~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 84 (213)
T cd03262 8 KSFGDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQ 84 (213)
T ss_pred EEECCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecc
Confidence 3334467999999999999999999999999999999999999887 99999999887421 123579999999
Q ss_pred CCCCCCCCHHHHHHhhhhh-ccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccc
Q 038815 248 DNHIGEMTVRETLAFSARC-QGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICAD 326 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 326 (1436)
+.+++.+||+||+.++... ++. .. .+....++.+++.+||++..+
T Consensus 85 ~~~~~~~t~~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~~l~~~~~ 130 (213)
T cd03262 85 FNLFPHLTVLENITLAPIKVKGM----------SK------------------------AEAEERALELLEKVGLADKAD 130 (213)
T ss_pred cccCCCCcHHHHHHhHHHHhcCC----------CH------------------------HHHHHHHHHHHHHcCCHhHhh
Confidence 9899999999999885421 110 00 001123456788899987655
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
.. ++.|||||||||+||+++ +++|||||+|||+.+...+.+.|+++.+ .+ ++|+.++|+..++.+++|
T Consensus 131 ~~-----~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~sh~~~~~~~~~d 203 (213)
T cd03262 131 AY-----PAQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EG-MTMVVVTHEMGFAREVAD 203 (213)
T ss_pred hC-----ccccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCC
Confidence 44 457999999999998766 5999999999999999999999999865 34 455557888899999999
Q ss_pred eEEEecCCeE
Q 038815 402 DIILLSDGLI 411 (1436)
Q Consensus 402 ~vilL~~G~i 411 (1436)
+|++|++|++
T Consensus 204 ~i~~l~~g~i 213 (213)
T cd03262 204 RVIFMDDGRI 213 (213)
T ss_pred EEEEEeCCcC
Confidence 9999999974
No 347
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=5.6e-31 Score=296.60 Aligned_cols=197 Identities=23% Similarity=0.367 Sum_probs=161.1
Q ss_pred eceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-cceEEEEcCCCCCCCCCCHHHHH
Q 038815 182 KDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-QRVAAYISQHDNHIGEMTVRETL 260 (1436)
Q Consensus 182 ~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l 260 (1436)
.|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||.||+
T Consensus 16 ~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l 92 (232)
T PRK10771 16 MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNI 92 (232)
T ss_pred ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHH
Confidence 3899999999999999999999999999999999987 9999999998754332 35799999999999999999999
Q ss_pred HhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccCCCCHH
Q 038815 261 AFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIRGISGG 340 (1436)
Q Consensus 261 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~rgLSGG 340 (1436)
.+..... .. ..+ .....++.+++.+||++..++. ++.||||
T Consensus 93 ~~~~~~~-~~--------~~~-------------------------~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 133 (232)
T PRK10771 93 GLGLNPG-LK--------LNA-------------------------AQREKLHAIARQMGIEDLLARL-----PGQLSGG 133 (232)
T ss_pred hcccccc-cC--------CCH-------------------------HHHHHHHHHHHHcCcHHHHhCC-----cccCCHH
Confidence 8753210 00 000 0112356788999998766654 4579999
Q ss_pred HHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEec
Q 038815 341 QKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGLIVYLG 415 (1436)
Q Consensus 341 qrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~iv~~G 415 (1436)
|||||+||++. +++|||||+|||..++..+.+.|+++.+..+ ++++.++|+..++.+++|+|++|++|++++.|
T Consensus 134 ~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g 212 (232)
T PRK10771 134 QRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQ-LTLLMVSHSLEDAARIAPRSLVVADGRIAWDG 212 (232)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeC
Confidence 99999998766 5999999999999999999999998765334 45555788888999999999999999999999
Q ss_pred ChHHHH
Q 038815 416 PRELVL 421 (1436)
Q Consensus 416 ~~~~~~ 421 (1436)
+.+++.
T Consensus 213 ~~~~~~ 218 (232)
T PRK10771 213 PTDELL 218 (232)
T ss_pred CHHHHH
Confidence 987764
No 348
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=99.97 E-value=3e-31 Score=314.77 Aligned_cols=188 Identities=22% Similarity=0.294 Sum_probs=161.7
Q ss_pred CceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee----cc---ccc---c-cceEEEec
Q 038815 890 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL----KK---QET---F-TRISGYCE 958 (1436)
Q Consensus 890 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~----~~---~~~---~-~~~~gyv~ 958 (1436)
+...+|+|+|+.|++||+++|||+||||||||+++|+|... +.+|+|.++|.+ .. ... + ++.+|||+
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 45679999999999999999999999999999999999876 457999999952 21 111 2 25799999
Q ss_pred cCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 038815 959 QNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1038 (1436)
Q Consensus 959 Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~ 1038 (1436)
|+..++|.+||+||+.|....+ ..+.+++.+.++++++.+||.+..+..+ ..||||||||+.|||+|+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999875443 2345566678899999999998877764 5799999999999999999999
Q ss_pred cceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1039 IIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1039 il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||+|||||+|||+.++..+++.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~Dr 234 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNR 234 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999765 999999999975 56777888
No 349
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=4.4e-32 Score=278.66 Aligned_cols=212 Identities=26% Similarity=0.380 Sum_probs=179.2
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCcc---ceEEEEc
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQ---RVAAYIS 245 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~ 245 (1436)
+++.++.+++.||+|+|..|++|.+|+++|||||||||||.+++.+++.+ +|+|+++|.++.....+ +.++..-
T Consensus 5 ~nv~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~lSILk 81 (252)
T COG4604 5 ENVSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKLSILK 81 (252)
T ss_pred hhhhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHHHHHH
Confidence 45667788889999999999999999999999999999999999999887 99999999998776543 5667888
Q ss_pred CCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccc
Q 038815 246 QHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICA 325 (1436)
Q Consensus 246 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 325 (1436)
|+......+||+|-+.|+.-...-|. ++ .+....++..++-|+|++..
T Consensus 82 Q~N~i~~rlTV~dLv~FGRfPYSqGR-------lt-------------------------~eD~~~I~~aieyl~L~~l~ 129 (252)
T COG4604 82 QENHINSRLTVRDLVGFGRFPYSQGR-------LT-------------------------KEDRRIINEAIEYLHLEDLS 129 (252)
T ss_pred hhchhhheeEHHHHhhcCCCcccCCC-------Cc-------------------------hHHHHHHHHHHHHhcccchH
Confidence 98888889999999999743221110 00 11234567788999998766
Q ss_pred cccccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 038815 326 DTLVGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLF 400 (1436)
Q Consensus 326 ~t~vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lf 400 (1436)
| ++...||||||||.-||...+ ++||||.++||...+.++++.||+++++.++|+|+ +.|+-..+..++
T Consensus 130 d-----ryLd~LSGGQrQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~Ktivi-VlHDINfAS~Ys 203 (252)
T COG4604 130 D-----RYLDELSGGQRQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVV-VLHDINFASCYS 203 (252)
T ss_pred H-----HhHHhcccchhhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEE-EEecccHHHhhh
Confidence 5 556689999999999976553 89999999999999999999999999999888877 567888999999
Q ss_pred CeEEEecCCeEEEecChHHHH
Q 038815 401 DDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 401 D~vilL~~G~iv~~G~~~~~~ 421 (1436)
|+|+-|.+|+++.+|+++++.
T Consensus 204 D~IVAlK~G~vv~~G~~~eii 224 (252)
T COG4604 204 DHIVALKNGKVVKQGSPDEII 224 (252)
T ss_pred hheeeecCCEEEecCCHHHhc
Confidence 999999999999999999885
No 350
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.1e-31 Score=308.24 Aligned_cols=204 Identities=19% Similarity=0.281 Sum_probs=162.8
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.++... .....+|+|+|+.+++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 478888887663110 001359999999999999999999999999999999999865 3579999999764
Q ss_pred c--------cccccceEEEeccCCCC-CCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCC
Q 038815 946 K--------QETFTRISGYCEQNDIH-SPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPG 1015 (1436)
Q Consensus 946 ~--------~~~~~~~~gyv~Q~d~~-~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 1015 (1436)
. ...+++.++|++|++.. ....||+||+.|....+ ....++..+.++++++.++|. +..+..
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 2 12345679999999632 22369999998864322 123344445688899999994 566654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
++.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++. |+|||+++|++. ++.+..|+
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~ 220 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADE 220 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 3579999999999999999999999999999999999999999999998764 899999999976 56777888
No 351
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=99.97 E-value=5e-31 Score=297.83 Aligned_cols=186 Identities=27% Similarity=0.386 Sum_probs=158.3
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc-cccceEEEeccCCCCCCCCCHH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE-TFTRISGYCEQNDIHSPLVTVY 970 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~d~~~~~lTv~ 970 (1436)
+.+|+|+|+.+.+||+++|+||||||||||+++|+|..+ +..|+|.++|.+.... ..++.++|++|+..+++..|+.
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 469999999999999999999999999999999999865 3579999999875432 2346799999999888899999
Q ss_pred HHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCC
Q 038815 971 ESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1050 (1436)
Q Consensus 971 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD 1050 (1436)
||+.+....+. .......+.++++++.+++.+..++.. +.||+||+||++||++|+.+|++++|||||+|||
T Consensus 91 enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~~LD 162 (237)
T TIGR00968 91 DNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQRVALARALAVEPQVLLLDEPFGALD 162 (237)
T ss_pred HHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99987654331 223333456789999999987777653 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1051 ARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1051 ~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
..+...+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 163 ~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~ 200 (237)
T TIGR00968 163 AKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADR 200 (237)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCE
Confidence 99999999999998775 899999999984 56666777
No 352
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=4.6e-31 Score=303.74 Aligned_cols=200 Identities=24% Similarity=0.278 Sum_probs=164.9
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+.. ..+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 5788898876531 12358999999999999999999999999999999999865 3579999999865
Q ss_pred cc---ccccceEEEeccCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 946 KQ---ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
.. ...++.++|++|++. +++..|+++++.+..... ....++..+.++++++.+++.+..+.. ++.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 32 234567999999974 677789999998864322 123344455688999999998877765 457999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++.. +.. .|+
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~-~~~-~d~ 211 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSE-AME-ADH 211 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchH-Hhc-CCE
Confidence 9999999999999999999999999999999999999999998764 8999999999864 433 677
No 353
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=2.9e-31 Score=266.47 Aligned_cols=198 Identities=28% Similarity=0.396 Sum_probs=165.9
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc-------cceEEEE
Q 038815 172 PTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP-------QRVAAYI 244 (1436)
Q Consensus 172 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv 244 (1436)
+......+||++|++.|++||-++|+|||||||||||-+|+|+..|+ +|+|.+.|+++..+.. .+.+++|
T Consensus 17 g~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfV 93 (228)
T COG4181 17 GQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFV 93 (228)
T ss_pred cCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEE
Confidence 34456788999999999999999999999999999999999999998 9999999999876543 2679999
Q ss_pred cCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccc
Q 038815 245 SQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDIC 324 (1436)
Q Consensus 245 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 324 (1436)
+|...++|+||..||+...+.++|-+.+ + ........|+.+||.+-
T Consensus 94 FQSF~Lip~ltAlENV~lPleL~ge~~~----------------------~------------~~~~A~~lL~~vGLg~R 139 (228)
T COG4181 94 FQSFHLIPNLTALENVALPLELRGESSA----------------------D------------SRAGAKALLEAVGLGKR 139 (228)
T ss_pred EEeeeccccchhhhhccchhhhcCCccc----------------------c------------HHHHHHHHHHHhCcccc
Confidence 9999999999999999988777653211 0 11224567899999875
Q ss_pred ccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 038815 325 ADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDL 399 (1436)
Q Consensus 325 ~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~l 399 (1436)
.+ .++.+|||||+|||+||||. +||-||||.+||..|..+|.+.|..+.+. .+|++|.++|+ +.....
T Consensus 140 l~-----HyP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre-~G~TlVlVTHD-~~LA~R 212 (228)
T COG4181 140 LT-----HYPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRE-RGTTLVLVTHD-PQLAAR 212 (228)
T ss_pred cc-----cCccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhh-cCceEEEEeCC-HHHHHh
Confidence 43 56789999999999997665 69999999999999999999999998775 56677767776 466778
Q ss_pred cCeEEEecCCeEEE
Q 038815 400 FDDIILLSDGLIVY 413 (1436)
Q Consensus 400 fD~vilL~~G~iv~ 413 (1436)
|||++-|.+|+++.
T Consensus 213 c~R~~r~~~G~l~~ 226 (228)
T COG4181 213 CDRQLRLRSGRLVE 226 (228)
T ss_pred hhheeeeecceecc
Confidence 99999999999874
No 354
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.1e-31 Score=300.04 Aligned_cols=205 Identities=22% Similarity=0.284 Sum_probs=162.8
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCC--CC-eeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~--~~-~~~G~i~i~g 942 (1436)
.+.++|+++.+. ++.+|+|+|+.|+|||++||+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 367788876653 2469999999999999999999999999999999999753 21 2479999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVS 1017 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1017 (1436)
.+... ..+++.++|++|+..+++..|++||+.+....+. ..+..+..+.++++++.+++.+........ .+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLKS-NAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-CcC
Confidence 86531 2356779999999999999999999987543321 112233345678899999986421111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++||++|+.+|++|+|||||+|||..+...+.+.|+++++ +.|||+++|++. ++.+..|+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~ 216 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDY 216 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCE
Confidence 7999999999999999999999999999999999999999999999976 689999999975 56677787
No 355
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.1e-31 Score=319.49 Aligned_cols=190 Identities=27% Similarity=0.447 Sum_probs=160.2
Q ss_pred CceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCe
Q 038815 864 PHSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGY 943 (1436)
Q Consensus 864 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~ 943 (1436)
+..++.+|+++.++ +++++++|+|++++||+.+||+|+||||||||+++|+|..++ .+|+|.+||.
T Consensus 318 ~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng~ 383 (559)
T COG4988 318 PIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNGI 383 (559)
T ss_pred CceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCc
Confidence 45666778888765 234799999999999999999999999999999999998763 5799999998
Q ss_pred ecc---cccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCccc------ccccCCC
Q 038815 944 LKK---QETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLR------QSLVGLP 1014 (1436)
Q Consensus 944 ~~~---~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~------~~~vg~~ 1014 (1436)
+.. +..+++.++||+|++.+++ -|++||+.++. | +.++ +.+.++++..+|.+.. |+.+|..
T Consensus 384 ~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~----~-~~s~----e~i~~al~~a~l~~~v~~p~GLdt~ige~ 453 (559)
T COG4988 384 DLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR----P-DASD----EEIIAALDQAGLLEFVPKPDGLDTVIGEG 453 (559)
T ss_pred cccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC----C-cCCH----HHHHHHHHHhcHHHhhcCCCcccchhccC
Confidence 654 4568899999999999886 59999998752 2 2233 3466788888877654 4555554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCC
Q 038815 1015 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPS 1079 (1436)
Q Consensus 1015 ~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps 1079 (1436)
.++|||||+|||++||||+.+++++++||||++||.++++.|++.|.++++ ++||++++|++.
T Consensus 454 -G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~ 516 (559)
T COG4988 454 -GAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE 516 (559)
T ss_pred -CCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH
Confidence 478999999999999999999999999999999999999999999999987 599999999974
No 356
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=99.97 E-value=3.4e-31 Score=304.09 Aligned_cols=203 Identities=26% Similarity=0.337 Sum_probs=161.9
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC------eeEEEEEE
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YITGSITI 940 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~------~~~G~i~i 940 (1436)
++++|+++.+. ++.+|+|+|+.|++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 45677766542 356999999999999999999999999999999999976532 12799999
Q ss_pred cCeeccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 038815 941 SGYLKKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLP-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGV 1016 (1436)
Q Consensus 941 ~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1016 (1436)
+|.+... ..+++.++|++|++..++.+||+|++.+....+.. .....++..+.++++++.++|.+..+.. +
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9986532 23456689999998766668999999875321110 0111123345688999999998776654 3
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHh
Q 038815 1017 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESF 1086 (1436)
Q Consensus 1017 ~~lSgGqrkRl~ia~~L~---------~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~F 1086 (1436)
..|||||||||+||++|+ .+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|++. ++.+..
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 579999999999999999 599999999999999999999999999998876 899999999975 566678
Q ss_pred hh
Q 038815 1087 DE 1088 (1436)
Q Consensus 1087 D~ 1088 (1436)
|+
T Consensus 223 d~ 224 (272)
T PRK13547 223 DR 224 (272)
T ss_pred CE
Confidence 87
No 357
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=7.1e-31 Score=299.52 Aligned_cols=215 Identities=21% Similarity=0.282 Sum_probs=165.6
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEEcCccCCCC-----CccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF-----EPQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~ 242 (1436)
++..+++.+.+|+|+|++|++||+++|+|||||||||||++|+|.++ |....+|+|.++|.++... ..++.++
T Consensus 9 nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~ 88 (252)
T PRK14256 9 QLNVHFGKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVG 88 (252)
T ss_pred EEEEEeCCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEE
Confidence 34444445679999999999999999999999999999999999986 3112389999999887432 1245799
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++..++.+||+||+.++.+..+... .. +....++.+++.+|+.
T Consensus 89 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~ 135 (252)
T PRK14256 89 MVFQKPNPFPAMSIYDNVIAGYKLNGRVN---------RS------------------------EADEIVESSLKRVALW 135 (252)
T ss_pred EEecCCCCCCcCcHHHHHHhHHHhcCCCC---------HH------------------------HHHHHHHHHHHHcCCc
Confidence 99999999999999999987543211000 00 0112346678888885
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
....... +..+..|||||||||+||+++ +++|||||+|||+.++.++.+.|+++.+ + ++||.++|..+++.
T Consensus 136 ~~~~~~~-~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~ 211 (252)
T PRK14256 136 DEVKDRL-KSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAA 211 (252)
T ss_pred hhhhHHh-hCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHH
Confidence 4211111 234667999999999998766 5999999999999999999999999853 3 45566788888999
Q ss_pred hhcCeEEEecCCeEEEecChHHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+++|++++|++|++++.|+.+++.
T Consensus 212 ~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 212 RVSDYTAFFYMGDLVECGETKKIF 235 (252)
T ss_pred hhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999988753
No 358
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.7e-31 Score=299.51 Aligned_cols=214 Identities=21% Similarity=0.322 Sum_probs=164.4
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCCC-----ccceE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEFE-----PQRVA 241 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~~-----~~~~~ 241 (1436)
+++..+++++.+|+|+|++|++||+++|+|||||||||||++|+|..+|. ...+|+|.++|.++.... .++.+
T Consensus 8 ~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i 87 (251)
T PRK14270 8 KNLNLWYGEKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRV 87 (251)
T ss_pred EEeEEEECCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhhe
Confidence 33444444567999999999999999999999999999999999998641 124899999999875321 24569
Q ss_pred EEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCC
Q 038815 242 AYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGL 321 (1436)
Q Consensus 242 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL 321 (1436)
+|++|++.+++ +||+||+.|.....+... . .+....++.+++.+||
T Consensus 88 ~~~~q~~~~~~-~tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l 133 (251)
T PRK14270 88 GMVFQKPNPFP-MSIYDNVAYGPRIHGIKD---------K------------------------KELDKIVEWALKKAAL 133 (251)
T ss_pred EEEecCCCcCC-CcHHHHHHhHHHhcCCCc---------H------------------------HHHHHHHHHHHHHcCC
Confidence 99999988887 899999998654322100 0 0011224567788887
Q ss_pred cc-cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhh
Q 038815 322 DI-CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPE 395 (1436)
Q Consensus 322 ~~-~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~ 395 (1436)
.. +.+ .-+..++.|||||||||+||+++ +++|||||+|||+.++.++.+.|+++.+ + ++++.++|+..+
T Consensus 134 ~~~~~~--~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~ 208 (251)
T PRK14270 134 WDEVKD--DLKKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQ 208 (251)
T ss_pred chhhhh--HhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHH
Confidence 42 111 11245668999999999998766 5999999999999999999999998754 4 455557788889
Q ss_pred HHhhcCeEEEecCCeEEEecChHHHH
Q 038815 396 TYDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 396 ~~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+.+++|+|++|++|++++.|+.+++.
T Consensus 209 ~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 209 ASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 99999999999999999999988763
No 359
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.3e-31 Score=300.34 Aligned_cols=192 Identities=21% Similarity=0.261 Sum_probs=153.7
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC--C-eeEEEEEEcCeeccc-----ccccceEEEeccCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGSITISGYLKKQ-----ETFTRISGYCEQNDIH 963 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~ 963 (1436)
+.+|+|+|+.++|||+++|+|+||||||||+++|+|.... . +.+|+|.++|.+... ...++.++|++|+..+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 5699999999999999999999999999999999997531 1 357999999976532 1345679999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceec
Q 038815 964 SPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1043 (1436)
Q Consensus 964 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lD 1043 (1436)
++. ||+||+.+....+. .....+..++.++++++.++|.+........ .+..||||||||++||++|+.+|++|+||
T Consensus 98 ~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~Gq~qrv~laral~~~p~llllD 174 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFELSGGQQQRLCIARAIAVKPTMLLMD 174 (251)
T ss_pred ccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 775 99999987643331 1112233445678899999996532111111 24689999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1044 EPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1044 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||+.+...+.+.|+++. +|+|||+++|++. ++.+..|+
T Consensus 175 EPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~ 217 (251)
T PRK14244 175 EPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDR 217 (251)
T ss_pred CCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCE
Confidence 9999999999999999999985 4899999999976 56667787
No 360
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.7e-31 Score=301.27 Aligned_cols=215 Identities=23% Similarity=0.340 Sum_probs=165.0
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCC-----CccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----EPQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~ 242 (1436)
++..+++.+++|+|+|++|++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++
T Consensus 9 ~v~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~ 88 (258)
T PRK14241 9 DLNIYYGSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIG 88 (258)
T ss_pred eEEEEECCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceE
Confidence 3444444567999999999999999999999999999999999998641 01399999999886421 1245799
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++.+++.+||+||+.++....+.. .+ ...+..++.+++.+||.
T Consensus 89 ~~~q~~~~~~~~tv~~nl~~~~~~~~~~---------~~------------------------~~~~~~~~~~l~~~~l~ 135 (258)
T PRK14241 89 MVFQRPNPFPTMSIRDNVVAGLKLNGVR---------NK------------------------KDLDELVEKSLRGANLW 135 (258)
T ss_pred EEccccccCCCCcHHHHHHHHHHhcCCC---------CH------------------------HHHHHHHHHHHHHcCCc
Confidence 9999999999999999998865322100 00 00122346678888884
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
....... +..+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++ + ++||.++|+..++.
T Consensus 136 ~~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~~~~~~ 211 (258)
T PRK14241 136 NEVKDRL-DKPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHNMQQAA 211 (258)
T ss_pred hhhhhHh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHH
Confidence 2111111 244568999999999998776 4999999999999999999999998743 4 45566788888999
Q ss_pred hhcCeEEEec------CCeEEEecChHHHH
Q 038815 398 DLFDDIILLS------DGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~------~G~iv~~G~~~~~~ 421 (1436)
+++|+|++|+ +|++++.|+++++.
T Consensus 212 ~~~d~i~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 212 RVSDQTAFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred HhCCEEEEEecccCCCCceEEecCCHHHHH
Confidence 9999999997 79999999988763
No 361
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.3e-31 Score=300.18 Aligned_cols=212 Identities=20% Similarity=0.259 Sum_probs=163.6
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC---CCCCCcccEEEEcCccCCCCC-----ccceEE
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKL---DSSLKVSGRVTYNGHNMDEFE-----PQRVAA 242 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~---~~~~~~~G~I~~~G~~~~~~~-----~~~~~~ 242 (1436)
+..+++.+++|+|+|+.|++||+++|+|||||||||||++|+|.. ++. ..+|+|.++|.++.... .++.++
T Consensus 9 ~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 87 (250)
T PRK14245 9 VNFWYGDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVG 87 (250)
T ss_pred EEEEECCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheE
Confidence 334444567999999999999999999999999999999999973 331 13899999999875421 235699
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++..++ .||.||+.++.+.++... . ......++.+++.+||.
T Consensus 88 ~v~q~~~~~~-~tv~~nl~~~~~~~~~~~----------~-----------------------~~~~~~~~~~l~~~~l~ 133 (250)
T PRK14245 88 MVFQRPNPFP-KSIFENVAYGLRVNGVKD----------N-----------------------AFIRQRVEETLKGAALW 133 (250)
T ss_pred EEecCCccCc-ccHHHHHHHHHHHcCCCc----------H-----------------------HHHHHHHHHHHHHcCCC
Confidence 9999988777 699999988654321100 0 00112356678889986
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
+...+.. ++.++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.
T Consensus 134 ~~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~ 209 (250)
T PRK14245 134 DEVKDKL-KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--KD-YTIVIVTHNMQQAA 209 (250)
T ss_pred cchhhhh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHH
Confidence 4322211 245668999999999998766 599999999999999999999999874 24 45566788888999
Q ss_pred hhcCeEEEecCCeEEEecChHHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+++|+|++|++|++++.|+++++.
T Consensus 210 ~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 210 RVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred hhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999998874
No 362
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=4.1e-31 Score=305.64 Aligned_cols=204 Identities=22% Similarity=0.269 Sum_probs=165.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
-+.++|+++.++.... ...+.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~~-------~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNEE-------STEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCCC-------CCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 3678888877642100 012469999999999999999999999999999999999865 4579999999876
Q ss_pred cc----ccccceEEEeccCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 038815 946 KQ----ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLS 1020 (1436)
Q Consensus 946 ~~----~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1020 (1436)
.. ...++.+||++|++. .+...||.|++.|..... ..+..+.++.++++++.+||.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 42 234677999999964 233469999998875432 2234445567899999999998877764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++.. +- ..|+
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~-~~-~~d~ 213 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEE-AV-EADR 213 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHH-Hh-cCCE
Confidence 99999999999999999999999999999999999999999999764 9999999999875 33 3787
No 363
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.8e-31 Score=302.59 Aligned_cols=199 Identities=23% Similarity=0.271 Sum_probs=161.0
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEEc
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSITIS 941 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~---~~~~G~i~i~ 941 (1436)
..+.++|+++.+. .+.+|+|+|+.|++||+++|+|||||||||||++|+|..+. .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3588899987653 24699999999999999999999999999999999997542 1358999999
Q ss_pred Ceecc-----cccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccC
Q 038815 942 GYLKK-----QETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP----LRQSLVG 1012 (1436)
Q Consensus 942 g~~~~-----~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg 1012 (1436)
|.+.. ....++.++|++|+..+++ .||+||+.+.+..+. ... ...+.++++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 98642 1234567999999988887 499999988764431 111 22345678888888743 22332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1013 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1013 ~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..||||||||++||++|+.+|++|+|||||+|||+.+...+++.|+++++ ++|||+++|++. ++.+..|+
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~ 222 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDM 222 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCE
Confidence 467999999999999999999999999999999999999999999999854 799999999974 56777887
No 364
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=99.97 E-value=8.3e-32 Score=339.52 Aligned_cols=201 Identities=30% Similarity=0.449 Sum_probs=165.2
Q ss_pred cCCCceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEE
Q 038815 861 PFEPHSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITI 940 (1436)
Q Consensus 861 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i 940 (1436)
|.-...++|+|++|.+.. ++..+|+|+|+.|+|||.+||+|+||||||||+|+|+|..+ +..|+|.+
T Consensus 466 ~~~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~ 532 (709)
T COG2274 466 PKLQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILL 532 (709)
T ss_pred cccCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEE
Confidence 334557999999998863 22469999999999999999999999999999999999876 46899999
Q ss_pred cCeeccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-------cccccc
Q 038815 941 SGYLKKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-------PLRQSL 1010 (1436)
Q Consensus 941 ~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-------~~~~~~ 1010 (1436)
||++..+ ..+|+.+|||+|++.++. -|++||+.++. ++.+.++ +.++++..|.. .-.|+.
T Consensus 533 dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e~----i~~A~~~ag~~~fI~~lP~gy~t~ 602 (709)
T COG2274 533 DGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDEE----IIEAAQLAGAHEFIENLPMGYDTP 602 (709)
T ss_pred CCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHHH----HHHHHHHhCcHHHHHhcccccccc
Confidence 9998654 568899999999998875 69999998752 2333222 23334433333 335677
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1011 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1011 vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+|..| .+||||||||++|||+|+++|+||+||||||+||+.+.+.|++.|++... |+|+|+++|.++ .....|+
T Consensus 603 v~E~G-~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~-~~T~I~IaHRl~--ti~~adr 676 (709)
T COG2274 603 VGEGG-ANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ-GRTVIIIAHRLS--TIRSADR 676 (709)
T ss_pred cccCC-CCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc-CCeEEEEEccch--HhhhccE
Confidence 77654 58999999999999999999999999999999999999999999999754 799999999986 5778888
No 365
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6e-31 Score=298.93 Aligned_cols=204 Identities=21% Similarity=0.261 Sum_probs=159.6
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-CeeEEEEEEcCeec
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGSITISGYLK 945 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~-~~~~G~i~i~g~~~ 945 (1436)
+.++|+++.++ .+.+|+|+|+.++|||+++|+||||||||||+++|+|.... .+.+|+|.++|.+.
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 45677776552 24699999999999999999999999999999999997532 24579999999875
Q ss_pred cc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 038815 946 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTE 1022 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1022 (1436)
.. ..+++.++|++|+..+++ .||+||+.+....+... .......+.++++++.++|.+........ ..+.||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMI-KNKDEEEALVVDCLQKVGLFEEVKDKLKQ-NALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCcc-cChHHHHHHHHHHHHHcCCChhhhHHhcC-CcccCCHH
Confidence 42 234567999999988887 69999998865443110 11223345678899999995422111111 24679999
Q ss_pred HHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1023 qrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||++|||+|+.+|++|+|||||+|||..++..+.+.|+++.+ |+|||+++|+++ ++.+..|+
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~ 210 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADY 210 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcE
Confidence 99999999999999999999999999999999999999999865 899999999974 35555666
No 366
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=99.97 E-value=6.5e-31 Score=302.02 Aligned_cols=202 Identities=24% Similarity=0.268 Sum_probs=162.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCC--CCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDN--HIG 252 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 252 (1436)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999987 9999999988753221 246899999874 578
Q ss_pred CCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc-ccccccccC
Q 038815 253 EMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD-ICADTLVGD 331 (1436)
Q Consensus 253 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~ 331 (1436)
.+||.|++.+..+.... ... .+....++.+++.+||. +..+.
T Consensus 103 ~~tv~~~l~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~---- 145 (267)
T PRK15112 103 RQRISQILDFPLRLNTD---------LEP------------------------EQREKQIIETLRQVGLLPDHASY---- 145 (267)
T ss_pred chhHHHHHHHHHHhccC---------CCH------------------------HHHHHHHHHHHHHcCCChHHHhc----
Confidence 88999999876432210 000 00112356789999994 44443
Q ss_pred cccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 038815 332 EMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILL 406 (1436)
Q Consensus 332 ~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL 406 (1436)
.+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|
T Consensus 146 -~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 146 -YPHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQ-GISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred -CchhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHhcCEEEEE
Confidence 3457999999999998766 599999999999999999999999986533 455556788888999999999999
Q ss_pred cCCeEEEecChHHHH
Q 038815 407 SDGLIVYLGPRELVL 421 (1436)
Q Consensus 407 ~~G~iv~~G~~~~~~ 421 (1436)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999887753
No 367
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.9e-31 Score=299.45 Aligned_cols=194 Identities=28% Similarity=0.364 Sum_probs=159.6
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.+. ++.+|+|+|+.+++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 367788877642 2469999999999999999999999999999999999765 3579999999765
Q ss_pred cc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCH
Q 038815 946 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSg 1021 (1436)
.. ...++.++|++|+..+++ .||+|++.+....+ . . ..+.++++++.++|. +..+.. +..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G--E--KNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C--c--HHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 32 234567999999988776 69999997653321 1 1 124577899999996 455553 467999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||++||++|+.+|++|+|||||+|||..+...+.+.|++++++ |+|||+++|++. ++-+..|+
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~ 201 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDY 201 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999998774 999999999976 45566777
No 368
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.9e-31 Score=300.76 Aligned_cols=204 Identities=21% Similarity=0.268 Sum_probs=161.9
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCC--CC-eeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~--~~-~~~G~i~i~g 942 (1436)
.+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478888887653 2469999999999999999999999999999999999754 21 1479999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVS 1017 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1017 (1436)
.+... ...++.+||++|+..+++. ||+||+.+....+. ....++..+.++++++.+++.+........ ..+
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~-~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHT-QAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhC-Ccc
Confidence 87531 2345679999999888875 99999987644321 112334445678899999986421111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+||||||||++||++|+.+|++|+|||||+|||..++..+++.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~ 223 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQ 223 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCE
Confidence 8999999999999999999999999999999999999999999999865 799999999975 56777887
No 369
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=7.6e-31 Score=295.95 Aligned_cols=184 Identities=29% Similarity=0.392 Sum_probs=157.0
Q ss_pred EeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc-ccccceEEEeccCCCCCCCCCHHHH
Q 038815 894 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ-ETFTRISGYCEQNDIHSPLVTVYES 972 (1436)
Q Consensus 894 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~E~ 972 (1436)
+|+|+|++++|||+++|+|+||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|+..+++.+|+.|+
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999765 457999999986543 1234679999999999999999999
Q ss_pred HHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHH
Q 038815 973 LLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1052 (1436)
Q Consensus 973 l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~ 1052 (1436)
+.+..... .....+..+.++++++.++|.+..++.+ +.||||||||++||++|+.+|++++|||||+|||..
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223344456788999999988777764 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1053 AAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1053 ~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~ 199 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADK 199 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999998765 999999999984 46667787
No 370
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=5.2e-31 Score=306.29 Aligned_cols=200 Identities=22% Similarity=0.313 Sum_probs=159.2
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCC----C----CccceEEEEcCCCC-
Q 038815 179 TILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDE----F----EPQRVAAYISQHDN- 249 (1436)
Q Consensus 179 ~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~----~----~~~~~~~yv~Q~d~- 249 (1436)
.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 5999999999999999999999999999999999999887 9999999988642 1 12356899999863
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc-cccccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD-ICADTL 328 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~ 328 (1436)
.+...||+||+.|+....+.. . .+....++.+++.+||+ +..++
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~ll~~~~L~~~~~~~- 146 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGEN----------K------------------------QEAYKKVPELLKLVQLPEDYVKR- 146 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhHhcC-
Confidence 233469999998864321100 0 00112345678889994 44443
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
.++.|||||||||+||+++ +|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|..+++.+++|+|
T Consensus 147 ----~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 147 ----SPFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEY-KKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred ----ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEE
Confidence 4557999999999998776 499999999999999999999999886533 455566788888999999999
Q ss_pred EEecCCeEEEecChHHHH
Q 038815 404 ILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~~ 421 (1436)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999987763
No 371
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=7.5e-31 Score=299.42 Aligned_cols=214 Identities=22% Similarity=0.318 Sum_probs=163.6
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEEcCccCCCC-----CccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF-----EPQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~ 242 (1436)
++..++.++.+|+|+|++|++||+++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++
T Consensus 10 ~l~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 89 (252)
T PRK14239 10 DLSVYYNKKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIG 89 (252)
T ss_pred eeEEEECCeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEE
Confidence 34444445679999999999999999999999999999999999853 4222389999999887421 1245799
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++..++ +||+||+.++....+... . ......++.+++.+|+.
T Consensus 90 ~v~q~~~~~~-~tv~enl~~~~~~~~~~~----------~-----------------------~~~~~~~~~~l~~~~l~ 135 (252)
T PRK14239 90 MVFQQPNPFP-MSIYENVVYGLRLKGIKD----------K-----------------------QVLDEAVEKSLKGASIW 135 (252)
T ss_pred EEecCCccCc-CcHHHHHHHHHHHcCCCc----------H-----------------------HHHHHHHHHHHHHcCCc
Confidence 9999988777 899999988643321100 0 00112245567788874
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
....+. -+..++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.
T Consensus 136 ~~~~~~-~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~ 211 (252)
T PRK14239 136 DEVKDR-LHDSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQAS 211 (252)
T ss_pred hhHHHH-HhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHH
Confidence 321111 1345668999999999998766 5999999999999999999999998743 4 45566788888999
Q ss_pred hhcCeEEEecCCeEEEecChHHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+.+|+|++|++|++++.|+.+++.
T Consensus 212 ~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 212 RISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999988763
No 372
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=7e-31 Score=299.24 Aligned_cols=200 Identities=22% Similarity=0.293 Sum_probs=160.6
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~---~~~G~i~i~g 942 (1436)
.+.++|+++.+. ++.+|+|+|+.+++||+++|+||||||||||+++|+|..... +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367788877653 246999999999999999999999999999999999964311 2479999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 1013 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1013 (1436)
.+... ...++.++|++|+..+++ .|++||+.+....+. ..+.++..+.++++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHG--IKDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87532 234567999999988877 899999988654321 1123334566788899988753 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1014 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1014 ~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~ 214 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK-DYTIVIVTHNMQ-QASRISDK 214 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEEeCHH-HHHhhCCE
Confidence 467999999999999999999999999999999999999999999999854 899999999974 56677787
No 373
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=7.1e-31 Score=299.18 Aligned_cols=203 Identities=22% Similarity=0.287 Sum_probs=161.1
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEcCe
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSITISGY 943 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~---~~~G~i~i~g~ 943 (1436)
++++|+++.+. ++.+|+|+|+.+++||+++|+|||||||||||++|+|..... +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67788876542 246999999999999999999999999999999999975421 25799999998
Q ss_pred eccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 038815 944 LKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSG 1018 (1436)
Q Consensus 944 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1018 (1436)
+... ...++.++|++|++.+++ .||+|++.+....+. ....+..++.++++++.+++.+..+.... ..+.+
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~ 146 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELN-KPGTR 146 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHh-CChhh
Confidence 6532 134567999999988887 899999988654321 11223344567888999998642111111 12468
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1019 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1019 lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||||++||++|+.+|++|+|||||+|||..++..+++.|+++++ ++|||+++|++. ++.+..|+
T Consensus 147 LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~ 214 (250)
T PRK14262 147 LSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADY 214 (250)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999999865 799999999976 46677787
No 374
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=7.7e-31 Score=299.30 Aligned_cols=204 Identities=27% Similarity=0.312 Sum_probs=160.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~--~-~~~~G~i~i~g 942 (1436)
.+.++|+++.+. ++.+|+|+|+.+++||++||+||||||||||+++|+|... + ...+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 467888887653 2469999999999999999999999999999999999632 2 12479999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVS 1017 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1017 (1436)
.+... ..+++.++|++|+..+++ .||+||+.+....+. ....+...+.++++++.+++.+........ .+.
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 147 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHD-SAL 147 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhc-Ccc
Confidence 86531 234567999999988777 899999987644321 112233345678889999875321111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++||++|+.+|++|+|||||+|||..+...+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 148 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~ 216 (252)
T PRK14239 148 GLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDR 216 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999865 699999999975 57777888
No 375
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=7.7e-31 Score=299.02 Aligned_cols=200 Identities=22% Similarity=0.251 Sum_probs=161.6
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~---~~~G~i~i~g 942 (1436)
-+.++|+++.+. ++.+|+|+|+.+++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 466788876542 246999999999999999999999999999999999975421 2579999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 1013 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1013 (1436)
.+... ...++.+||++|++.+++ .|++||+.|....... ...++..+.++++++.++|.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87532 134567999999988887 8999999886543211 123344456788999998853 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1014 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1014 ~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..||||||||++||++|+.+|+||+|||||+|||..++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~ 215 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDY 215 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCE
Confidence 468999999999999999999999999999999999999999999999876 689999999975 67777888
No 376
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=99.97 E-value=5.9e-31 Score=294.86 Aligned_cols=195 Identities=24% Similarity=0.358 Sum_probs=159.2
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.+. ++.+|+|+|+.+++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 477888887652 2469999999999999999999999999999999999765 3579999999764
Q ss_pred cc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCH
Q 038815 946 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSg 1021 (1436)
.. ..+++.++|++|+..+++ .||+||+.+....+.. .. ..+.++++++.+++. ...+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---QP--DPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---Ch--HHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 32 234567999999988877 4999999875443321 11 124567899999995 355554 467999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ .|.|||+++|++.. + +..|+
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~ 206 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADK 206 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCE
Confidence 999999999999999999999999999999999999999999876 48999999999864 3 34665
No 377
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=4.5e-31 Score=297.39 Aligned_cols=196 Identities=23% Similarity=0.281 Sum_probs=160.4
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++++|+++.++ ++ ..|||+.+++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYH-------------HL--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEEC-------------Cc--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 45777777653 11 138999999999999999999999999999999865 45799999998653
Q ss_pred c-ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 038815 947 Q-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 1025 (1436)
Q Consensus 947 ~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1025 (1436)
. ...++.++|++|++.+++.+|+.||+.+...... .. .+...+.++++++.+||.+..++.+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGL--KL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhccccccc--CC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 2 1234679999999999999999999987532111 11 1233556899999999988777764 579999999
Q ss_pred HHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1026 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1026 Rl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|++||++|+.+|++|+|||||+|||..++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 199 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPR 199 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999998764 899999999986 45666777
No 378
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=99.97 E-value=1e-30 Score=299.25 Aligned_cols=211 Identities=23% Similarity=0.317 Sum_probs=165.7
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCcc-----CCCCCc------
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHN-----MDEFEP------ 237 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~-----~~~~~~------ 237 (1436)
+++..+.+++.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.+ +.....
T Consensus 10 ~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~ 86 (258)
T PRK11701 10 RGLTKLYGPRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRL 86 (258)
T ss_pred eeeEEEcCCceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHH
Confidence 34444444567999999999999999999999999999999999999987 9999999987 554322
Q ss_pred -cceEEEEcCCC--CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHH
Q 038815 238 -QRVAAYISQHD--NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDY 314 (1436)
Q Consensus 238 -~~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (1436)
++.++|++|++ .+++.+|+.||+.+.....+.. +. .+....+++
T Consensus 87 ~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------~~-----------~~~~~~~~~ 133 (258)
T PRK11701 87 LRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGAR----------------------HY-----------GDIRATAGD 133 (258)
T ss_pred hhcceEEEeeCcccccCccccHHHHHHHHHHHhccC----------------------cH-----------HHHHHHHHH
Confidence 23589999997 3677889999997643211000 00 001223567
Q ss_pred HHHHcCCcc-cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEE
Q 038815 315 YLKVLGLDI-CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVIS 388 (1436)
Q Consensus 315 ~l~~lgL~~-~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~ 388 (1436)
+++.+|+.+ ..++ .+..|||||||||+||+++ +++|||||+|||+.+...+.+.|+++.+. .+.+||.
T Consensus 134 ~l~~~~l~~~~~~~-----~~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~ 207 (258)
T PRK11701 134 WLERVEIDAARIDD-----LPTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRE-LGLAVVI 207 (258)
T ss_pred HHHHcCCChhHHhC-----CCccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEE
Confidence 889999963 3443 4557999999999998776 59999999999999999999999987653 3456666
Q ss_pred EecChhhHHhhcCeEEEecCCeEEEecChHHHH
Q 038815 389 LLQPAPETYDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 389 ~~q~~~~~~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
++|+..++.+.+|+|++|++|++++.|+++++.
T Consensus 208 isH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 208 VTHDLAVARLLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred EeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 888899999999999999999999999987753
No 379
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=99.97 E-value=4.3e-31 Score=314.55 Aligned_cols=179 Identities=25% Similarity=0.357 Sum_probs=155.0
Q ss_pred ceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc-------ccccceEEEeccCCCCCCCCCH
Q 038815 897 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ-------ETFTRISGYCEQNDIHSPLVTV 969 (1436)
Q Consensus 897 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~d~~~~~lTv 969 (1436)
|+|+.+++||+++|+|||||||||||++|+|... +.+|+|.++|.+... ...++.+||++|+..+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999865 357999999986532 1245679999999999999999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCC
Q 038815 970 YESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1049 (1436)
Q Consensus 970 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgL 1049 (1436)
+||+.|..... ...++.+.++++++.++|.+..+..+ ..|||||||||+||++|+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 12334556889999999998877763 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1050 DARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1050 D~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|+.++..+++.|++++++ |+|||+++|++. ++.+..|+
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~ 201 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADR 201 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999875 899999999985 57777888
No 380
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=99.97 E-value=6e-31 Score=302.30 Aligned_cols=209 Identities=20% Similarity=0.221 Sum_probs=165.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+..+.. ....+.+.+|+|+|+.+++||++||+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 77 (267)
T PRK15112 4 LLEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPL 77 (267)
T ss_pred eEEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 3678888877642110 000012469999999999999999999999999999999999875 3579999999865
Q ss_pred cc---ccccceEEEeccCCC--CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCC
Q 038815 946 KQ---ETFTRISGYCEQNDI--HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVSGL 1019 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~l 1019 (1436)
.. ...++.++|++|+.. +.+.+||.|++.+....+. .....+..+.++++++.++|. +..+.. +..|
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~L 150 (267)
T PRK15112 78 HFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHML 150 (267)
T ss_pred CCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhc
Confidence 42 123456999999874 5678899999988654432 123334445688999999994 555554 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1020 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1020 SgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||||+||++|+.+|+||+|||||+|||+.+...+.+.|++++++ |.|||+++|++. ++.+..|+
T Consensus 151 S~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~ 219 (267)
T PRK15112 151 APGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQ 219 (267)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCE
Confidence 999999999999999999999999999999999999999999999864 899999999975 56667787
No 381
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=4.6e-31 Score=305.39 Aligned_cols=202 Identities=24% Similarity=0.268 Sum_probs=165.8
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCe-eEEEEEEcCee
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ITGSITISGYL 944 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~-~~G~i~i~g~~ 944 (1436)
.++++|+++.++. ..+.+|+|||+.|++||++||+||||||||||+++|+|...+.. .+|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4778888876531 12459999999999999999999999999999999999765321 24899999987
Q ss_pred ccc---ccccceEEEeccCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 038815 945 KKQ---ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLS 1020 (1436)
Q Consensus 945 ~~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1020 (1436)
... ...++.+||++|+.. .++..||+|++.|....+ ..+.++..+.++++++.++|.+..+.. ++.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSE-----PANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCC
Confidence 643 234567999999974 566789999998764322 234455556789999999998877766 46899
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||++||++|+.+|++|+|||||+|||..++..+++.|+++++. |.|||+++|+++. + +..|+
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~ 212 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQ 212 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCE
Confidence 99999999999999999999999999999999999999999999865 8999999999874 4 46788
No 382
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=99.97 E-value=1e-30 Score=292.92 Aligned_cols=205 Identities=24% Similarity=0.297 Sum_probs=159.0
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEc--Ce-
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITIS--GY- 943 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~--g~- 943 (1436)
+.++|+++.+..... ...++.+|+|+|+.|++||+++|+|+||||||||+++|+|... +.+|+|.++ |.
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYL--PDSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEEecCCCc
Confidence 456777766532100 0012579999999999999999999999999999999999865 347999998 42
Q ss_pred -eccc---cc----ccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCC
Q 038815 944 -LKKQ---ET----FTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-LRQSLVGLP 1014 (1436)
Q Consensus 944 -~~~~---~~----~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~ 1014 (1436)
+... .. .++.+||++|+..+++.+||+|++.+..... ....+...+.++++++.++|.+ ..+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 146 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP---- 146 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC----
Confidence 2211 11 1346999999998899999999998764332 1233334456788999999975 33443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1015 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1015 ~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+..|+
T Consensus 147 -~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~ 218 (224)
T TIGR02324 147 -PATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADR 218 (224)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcce
Confidence 4679999999999999999999999999999999999999999999999877999999999943 33345555
No 383
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=2.3e-31 Score=276.88 Aligned_cols=191 Identities=27% Similarity=0.400 Sum_probs=160.0
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++.+|++|++. .+.+|++||+.++|||++||+|||||||||||++|+|... +.+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChh
Confidence 45678888764 4689999999999999999999999999999999999776 34799999998764
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCC--CHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 947 Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEV--DSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 947 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~--~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
. ....+.-+..+|+..+....||+|-+.++.. |... ..++..+.++++|...++.+++... ...|||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~---p~~~g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSG 138 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRI---PHRSGREPEEDERIAAQALAATDLSGLAGRD-----YRTLSG 138 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccc---ccccCCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCc
Confidence 3 3455677899999877666899999998743 3221 2224445688999999999988765 367999
Q ss_pred HHHHHHHHHHHHhh------CCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCH
Q 038815 1022 EQRKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSI 1080 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~------~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~ 1080 (1436)
||||||.+||.|++ ++++||||||||.||...+..++++.|++++.|..|+|+.||.+.
T Consensus 139 GEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL 203 (259)
T COG4559 139 GEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL 203 (259)
T ss_pred hHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH
Confidence 99999999999986 345899999999999999999999999999999999999999764
No 384
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1e-30 Score=299.45 Aligned_cols=216 Identities=21% Similarity=0.303 Sum_probs=164.9
Q ss_pred ccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEEcCccCCCC-----Cccce
Q 038815 168 LQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF-----EPQRV 240 (1436)
Q Consensus 168 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~ 240 (1436)
++++..+++.+++|+|+|++|++||+++|+|||||||||||++|+|.++ |....+|+|+++|+++... ..++.
T Consensus 15 i~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 94 (259)
T PRK14274 15 INGMNLWYGQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKN 94 (259)
T ss_pred EeeEEEEECCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhc
Confidence 3444555555679999999999999999999999999999999999986 3222489999999987431 12356
Q ss_pred EEEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcC
Q 038815 241 AAYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLG 320 (1436)
Q Consensus 241 ~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg 320 (1436)
++|++|++.+++. ||+||+.|..+..+... + .+....++.+++.+|
T Consensus 95 i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~ 140 (259)
T PRK14274 95 IGMVFQKGNPFPQ-SIFDNVAYGPRIHGTKN---------K------------------------KKLQEIVEKSLKDVA 140 (259)
T ss_pred eEEEecCCccccc-CHHHHHHhHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcC
Confidence 9999999888875 99999988643221100 0 001122456778888
Q ss_pred CcccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhh
Q 038815 321 LDICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPE 395 (1436)
Q Consensus 321 L~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~ 395 (1436)
+.+...... +..++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.. + .+++.++|+.++
T Consensus 141 l~~~~~~~l-~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~ 216 (259)
T PRK14274 141 LWDEVKDRL-HTQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE--K-YTIVIVTHNMQQ 216 (259)
T ss_pred Cchhhhhhh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEEcCHHH
Confidence 853211111 345668999999999998766 5999999999999999999999998742 4 455557788889
Q ss_pred HHhhcCeEEEecCCeEEEecChHHHH
Q 038815 396 TYDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 396 ~~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+.+++|++++|++|+++.+|+++++.
T Consensus 217 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 217 AARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHhCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999999988763
No 385
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.2e-30 Score=299.93 Aligned_cols=216 Identities=21% Similarity=0.284 Sum_probs=166.9
Q ss_pred ccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCC-----Cccce
Q 038815 168 LQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----EPQRV 240 (1436)
Q Consensus 168 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~ 240 (1436)
++++..+++.+++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.
T Consensus 23 ~~nl~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 102 (267)
T PRK14237 23 TKDLHVYYGKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKH 102 (267)
T ss_pred EeeEEEEECCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcc
Confidence 334444555678999999999999999999999999999999999998641 12499999999987532 12457
Q ss_pred EEEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcC
Q 038815 241 AAYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLG 320 (1436)
Q Consensus 241 ~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg 320 (1436)
++|++|++.+++ .||+||+.++.+..+... + .+....++.+++.+|
T Consensus 103 i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~ 148 (267)
T PRK14237 103 IGMVFQRPNPFA-KSIYENITFALERAGVKD---------K------------------------KVLDEIVETSLKQAA 148 (267)
T ss_pred eEEEecCCcccc-ccHHHHHHhHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcC
Confidence 999999988887 699999988643221000 0 011223456788888
Q ss_pred CcccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhh
Q 038815 321 LDICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPE 395 (1436)
Q Consensus 321 L~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~ 395 (1436)
|.+..+... ++.++.|||||||||+||+++ +++|||||+|||+.+...+.+.|+++.. + ++|+.++|+.++
T Consensus 149 l~~~i~~~~-~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~ 224 (267)
T PRK14237 149 LWDQVKDDL-HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK--N-YTIIIVTHNMQQ 224 (267)
T ss_pred CCchhhhhh-cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHH
Confidence 864322222 356778999999999998766 5999999999999999999999998742 4 456667788889
Q ss_pred HHhhcCeEEEecCCeEEEecChHHHH
Q 038815 396 TYDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 396 ~~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+.++||++++|++|++++.|+.+++.
T Consensus 225 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 225 AARASDYTAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999988763
No 386
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=5e-31 Score=283.19 Aligned_cols=150 Identities=29% Similarity=0.424 Sum_probs=133.7
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc--ccccceEEEeccCCCCCCCCCH
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ--ETFTRISGYCEQNDIHSPLVTV 969 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 969 (1436)
..+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|+..+++..|+
T Consensus 13 ~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (173)
T cd03230 13 KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTV 90 (173)
T ss_pred eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccchHhhhccEEEEecCCccccCCcH
Confidence 369999999999999999999999999999999999865 357999999986532 2345679999999988888999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCC
Q 038815 970 YESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1049 (1436)
Q Consensus 970 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgL 1049 (1436)
+|++. ||||||||++||++|+.+|++|+|||||+||
T Consensus 91 ~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~L 126 (173)
T cd03230 91 RENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGL 126 (173)
T ss_pred HHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCC
Confidence 99873 8999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1050 DARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1050 D~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|+.++..+.+.|++++++|.|||+++|++. ++.+..|+
T Consensus 127 D~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~ 164 (173)
T cd03230 127 DPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDR 164 (173)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCE
Confidence 999999999999999877899999999975 45556665
No 387
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.97 E-value=1.6e-31 Score=341.16 Aligned_cols=196 Identities=25% Similarity=0.378 Sum_probs=162.1
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..++|+|+++... +++.+|+|+|++++||+++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3689999986432 1246999999999999999999999999999999999976 3 47999999987
Q ss_pred ccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-------ccccccCCC
Q 038815 945 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-------LRQSLVGLP 1014 (1436)
Q Consensus 945 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 1014 (1436)
.++ ..+++.++||+|++.++. -|++||+.++. | +.+++ .++++++..++.+ -.||.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~----~-~~~~e----ei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN----P-DASDE----QLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC----C-CCCHH----HHHHHHHHhCHHHHHHhcccccccccccC
Confidence 643 457889999999999886 59999998752 2 23333 3556666666554 347788876
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhh
Q 038815 1015 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1015 ~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
| .+||||||||++|||||+++|+||+||||||+||+.++..|++.|+++. +++|+|+++|+++ ..+.+|+.
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~I 553 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQI 553 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEE
Confidence 4 5799999999999999999999999999999999999999999999875 4899999999984 45778883
No 388
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=99.97 E-value=1.1e-30 Score=307.33 Aligned_cols=209 Identities=20% Similarity=0.276 Sum_probs=168.1
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEEcCee
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGSITISGYL 944 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~-~~~G~i~i~g~~ 944 (1436)
.+.++|++..+... .+...+|+|||+.|++||++||+|+||||||||+++|+|..... ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 57888988766421 12357999999999999999999999999999999999986532 238999999987
Q ss_pred ccc---cc---cc-ceEEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC
Q 038815 945 KKQ---ET---FT-RISGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPG 1015 (1436)
Q Consensus 945 ~~~---~~---~~-~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1015 (1436)
... .. ++ +.++||+|+. .+.|.+|+.+++........ ..+.++..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 532 11 22 4799999997 68899999999876544332 234455566788999999997643322 1 22
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+.+|||||||||+||++|+.+|++|++||||+|||..++..|++.|+++.++ |.|||+++||+. .+.+..|+
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dr 231 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDK 231 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCE
Confidence 5789999999999999999999999999999999999999999999999775 899999999975 46667788
No 389
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=9.8e-31 Score=290.97 Aligned_cols=196 Identities=29% Similarity=0.426 Sum_probs=157.4
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC-------CccceEEEE
Q 038815 172 PTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-------EPQRVAAYI 244 (1436)
Q Consensus 172 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv 244 (1436)
.++++++.+ |+|++|++ |+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|+
T Consensus 7 ~~~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~ 80 (214)
T cd03297 7 EKRLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLV 80 (214)
T ss_pred eEecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEE
Confidence 344455545 99999999 999999999999999999999999987 99999999876421 123579999
Q ss_pred cCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccc
Q 038815 245 SQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDIC 324 (1436)
Q Consensus 245 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 324 (1436)
+|++.+++.+||+||+.+..... . .. .....++.+++.+||++.
T Consensus 81 ~q~~~~~~~~t~~~~l~~~~~~~---~---------~~------------------------~~~~~~~~~l~~~~l~~~ 124 (214)
T cd03297 81 FQQYALFPHLNVRENLAFGLKRK---R---------NR------------------------EDRISVDELLDLLGLDHL 124 (214)
T ss_pred ecCCccCCCCCHHHHHHHHHhhC---C---------HH------------------------HHHHHHHHHHHHcCCHhH
Confidence 99998899999999998753210 0 00 011234567889999765
Q ss_pred ccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 038815 325 ADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDL 399 (1436)
Q Consensus 325 ~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~l 399 (1436)
.+. .++.|||||||||+||+++ +++|||||+|||+.++..+.+.++++++.. +++++.++|+.+++.++
T Consensus 125 ~~~-----~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~ 198 (214)
T cd03297 125 LNR-----YPAQLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNL-NIPVIFVTHDLSEAEYL 198 (214)
T ss_pred hhc-----CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEecCHHHHHHh
Confidence 554 4557999999999997766 599999999999999999999999986533 44566678888899999
Q ss_pred cCeEEEecCCeEEEec
Q 038815 400 FDDIILLSDGLIVYLG 415 (1436)
Q Consensus 400 fD~vilL~~G~iv~~G 415 (1436)
+|++++|++|++++.|
T Consensus 199 ~d~i~~l~~G~i~~~g 214 (214)
T cd03297 199 ADRIVVMEDGRLQYIG 214 (214)
T ss_pred cCEEEEEECCEEEecC
Confidence 9999999999998765
No 390
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.3e-31 Score=312.91 Aligned_cols=198 Identities=29% Similarity=0.436 Sum_probs=164.9
Q ss_pred CCceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcC
Q 038815 863 EPHSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISG 942 (1436)
Q Consensus 863 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g 942 (1436)
.+..++|+|+++++. +++++|++|||.|++||.+||+|+|||||||++++|.+..+ .+|+|+|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 345699999998875 23559999999999999999999999999999999998765 479999999
Q ss_pred eeccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-------ccccccC
Q 038815 943 YLKKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-------LRQSLVG 1012 (1436)
Q Consensus 943 ~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg 1012 (1436)
.+++. +.+|+.+||||||..++. -||.+|+.|+. .+.+.+ .|-++.+..++.+ -.+|.||
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHh
Confidence 87653 568899999999988875 69999999862 233333 3445556666554 3456677
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhh
Q 038815 1013 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1013 ~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
..| .-|||||||||+|||+++.+|+|+++|||||.||+.+...|++.+++. ..|+|+|++.|+. ++...||+.
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI 555 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKI 555 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEE
Confidence 765 469999999999999999999999999999999999999999999984 4599999999974 678889983
No 391
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=99.97 E-value=8.8e-31 Score=286.96 Aligned_cols=183 Identities=19% Similarity=0.277 Sum_probs=151.7
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++++|+++.+. ++.+++ +|+.++|||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~l~~-vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 65 (195)
T PRK13541 2 LSLHQLQFNIE-------------QKNLFD-LSITFLPSAITYIKGANGCGKSSLLRMIAGIMQ--PSSGNIYYKNCNIN 65 (195)
T ss_pred eEEEEeeEEEC-------------CcEEEE-EEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCcccC
Confidence 45677776542 234565 999999999999999999999999999999865 35799999998654
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 038815 947 QETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKR 1026 (1436)
Q Consensus 947 ~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkR 1026 (1436)
... ++.++|++|+...++..||+||+.+...... ..+.++++++.+++.+..+.. ++.||||||||
T Consensus 66 ~~~-~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~--------~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~~r 131 (195)
T PRK13541 66 NIA-KPYCTYIGHNLGLKLEMTVFENLKFWSEIYN--------SAETLYAAIHYFKLHDLLDEK-----CYSLSSGMQKI 131 (195)
T ss_pred hhh-hhhEEeccCCcCCCccCCHHHHHHHHHHhcc--------cHHHHHHHHHHcCCHhhhccC-----hhhCCHHHHHH
Confidence 322 3458999999877788999999987543221 123567888999998766665 35799999999
Q ss_pred HHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCC
Q 038815 1027 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPS 1079 (1436)
Q Consensus 1027 l~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps 1079 (1436)
++||++|+.+|++|+|||||+|||+.+...+.+.|+...+.|+|||+++|++.
T Consensus 132 l~la~al~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~ 184 (195)
T PRK13541 132 VAIARLIACQSDLWLLDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLES 184 (195)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 99999999999999999999999999999999999877777999999999975
No 392
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=9.6e-31 Score=298.14 Aligned_cols=213 Identities=23% Similarity=0.348 Sum_probs=164.0
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcccEEEEcCccCCCC-----CccceEEE
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDS--SLKVSGRVTYNGHNMDEF-----EPQRVAAY 243 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~y 243 (1436)
+..++++.++|+|+|+++++||+++|+|||||||||||++|+|.+++ ....+|+|.++|.++... ..++.++|
T Consensus 9 l~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~ 88 (250)
T PRK14262 9 FSAYYGEKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGM 88 (250)
T ss_pred eEEEeCCceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEE
Confidence 33444456799999999999999999999999999999999999874 112389999999887532 12457999
Q ss_pred EcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc
Q 038815 244 ISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI 323 (1436)
Q Consensus 244 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 323 (1436)
++|++.+++ +||+||+.++....+... + ...+..++..++.+|+..
T Consensus 89 ~~q~~~~~~-~tv~e~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~ 134 (250)
T PRK14262 89 VFQKPTPFP-MSIYDNVAFGPRIHGVKS---------K------------------------HKLDRIVEESLKKAALWD 134 (250)
T ss_pred EecCCccCc-ccHHHHHHHHHHHcCCCc---------H------------------------HHHHHHHHHHHHHcCCCc
Confidence 999988887 899999988643221100 0 001122456677888754
Q ss_pred cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 038815 324 CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 398 (1436)
Q Consensus 324 ~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 398 (1436)
..+. ..+..++.||||||||++||+++ +++|||||+|||..+...+.+.|+++.+ + ++++.++|+.+++.+
T Consensus 135 ~~~~-~~~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tili~sH~~~~~~~ 210 (250)
T PRK14262 135 EVKS-ELNKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--N-YTIVIVTHNIGQAIR 210 (250)
T ss_pred hhHH-HHhCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--C-cEEEEEeCCHHHHHH
Confidence 2111 12455678999999999998776 5999999999999999999999998753 4 456667788888999
Q ss_pred hcCeEEEecCCeEEEecChHHHH
Q 038815 399 LFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 399 lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
++|+|++|++|+++..|+.+++.
T Consensus 211 ~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 211 IADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred hCCEEEEEECCEEEEecCHHHHH
Confidence 99999999999999999988764
No 393
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=306.75 Aligned_cols=207 Identities=22% Similarity=0.313 Sum_probs=163.4
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCC-----CccceEEEEcCCCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----EPQRVAAYISQHDN 249 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~ 249 (1436)
..++|+|+|++|++||+++|+|||||||||||++|+|..++. ...+|+|.++|.++... ..++.++||+|++.
T Consensus 94 ~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~ 173 (329)
T PRK14257 94 TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPT 173 (329)
T ss_pred CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCc
Confidence 356999999999999999999999999999999999998631 12389999999998532 23567999999987
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLV 329 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 329 (1436)
.++ .||+|||.|+....+. ..++ ..+...+.+++..+|.+..++.+
T Consensus 174 ~~~-~ti~eNi~~~~~~~~~----------~~~~-----------------------~~~~~~~~~l~~~~L~~~l~~~~ 219 (329)
T PRK14257 174 PFE-MSIFDNVAYGPRNNGI----------NDRK-----------------------ILEKIVEKSLKSAALWDEVKDDL 219 (329)
T ss_pred cCC-CcHHHHHHhHHHhcCC----------ChHH-----------------------HHHHHHHHHHHHcCCcchhhhhh
Confidence 774 8999999986432110 0000 01112345677777755444555
Q ss_pred cCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 038815 330 GDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDII 404 (1436)
Q Consensus 330 g~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vi 404 (1436)
+ +....|||||||||+||||+ +++|||||+|||+.+...+.+.|+++.+ + .+++.++|....+.+.+|+|+
T Consensus 220 ~-~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Drii 295 (329)
T PRK14257 220 D-KAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETV 295 (329)
T ss_pred h-CCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEE
Confidence 4 45678999999999998877 5999999999999999999999998753 3 556668888889999999999
Q ss_pred EecCCeEEEecChHHHH
Q 038815 405 LLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 405 lL~~G~iv~~G~~~~~~ 421 (1436)
+|++|++++.|+++++.
T Consensus 296 vl~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 296 FFYQGWIEEAGETKTIF 312 (329)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999999874
No 394
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.2e-30 Score=306.70 Aligned_cols=210 Identities=24% Similarity=0.248 Sum_probs=168.1
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++.+|+++.+....... ...+...+|+|||+.|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEc
Confidence 478889987764321100 00123579999999999999999999999999999999999865 3579999999875
Q ss_pred cc------ccccceEEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCC
Q 038815 946 KQ------ETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGV 1016 (1436)
Q Consensus 946 ~~------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 1016 (1436)
.. ..+++.+|||+|++ .+.|.+||.+++....... ......+..+.+.++++.+||.+ ..+.. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 32 13456799999997 5889999999987654332 12344556678899999999963 44554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1017 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1017 ~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
..|||||||||+||+||+.+|++|++||||+|||..++..|++.|+++.++ |.|||+++|+.+ .+.+.-|+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adr 224 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADE 224 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 689999999999999999999999999999999999999999999999764 999999999965 45556677
No 395
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.5e-30 Score=305.93 Aligned_cols=208 Identities=17% Similarity=0.214 Sum_probs=165.0
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-C-eeEEEEEEcCee
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YITGSITISGYL 944 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~-~-~~~G~i~i~g~~ 944 (1436)
++++|++..+... .+...+|+|||+.|++||++||+|+||||||||+++|+|.... + +.+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 6788888766421 1125699999999999999999999999999999999997642 2 358999999987
Q ss_pred ccc---cc----ccceEEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC
Q 038815 945 KKQ---ET----FTRISGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPG 1015 (1436)
Q Consensus 945 ~~~---~~----~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1015 (1436)
... .. .++.++||+|++ .+.|.+||.+++........ ....++..+.+.++++.+||.+..+.+- ..
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~--~~ 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLD--VY 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHh--CC
Confidence 532 11 124699999997 47889999988865543321 2344556678899999999975322111 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..|||||||||+||++|+.+|++|++||||+|||..++..+++.|+++.+ .|.|||+++|+.+ .+.+..|+
T Consensus 151 p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adr 223 (326)
T PRK11022 151 PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHK 223 (326)
T ss_pred chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 468999999999999999999999999999999999999999999999976 5999999999976 45667788
No 396
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=99.97 E-value=1.2e-30 Score=290.05 Aligned_cols=194 Identities=21% Similarity=0.307 Sum_probs=158.2
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC-ccceEEEEcCCCCCCCCCCHHH
Q 038815 180 ILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE-PQRVAAYISQHDNHIGEMTVRE 258 (1436)
Q Consensus 180 iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 258 (1436)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|+.|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 568999999999999999999999999999999999987 999999999875432 2467999999999999999999
Q ss_pred HHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccCCCC
Q 038815 259 TLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIRGIS 338 (1436)
Q Consensus 259 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~rgLS 338 (1436)
|+.+...... .. . .+....++.+++.+||++..++ .++.||
T Consensus 90 n~~~~~~~~~-~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KL---------N------------------------AEQQEKVVDAAQQVGIADYLDR-----LPEQLS 130 (213)
T ss_pred HHHhHhhccC-Cc---------c------------------------HHHHHHHHHHHHHcCcHHHhhC-----CcccCC
Confidence 9987532100 00 0 0011234567899999766554 455799
Q ss_pred HHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEE
Q 038815 339 GGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGLIVY 413 (1436)
Q Consensus 339 GGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~iv~ 413 (1436)
|||||||+||+++ +++|||||+|||..++..+.+.|+++.+. ++++|+.++|+.+++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSE-RQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 9999999998766 59999999999999999999999987653 34556667888889999999999999999998
Q ss_pred ecC
Q 038815 414 LGP 416 (1436)
Q Consensus 414 ~G~ 416 (1436)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 874
No 397
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=9e-31 Score=298.48 Aligned_cols=214 Identities=22% Similarity=0.314 Sum_probs=163.8
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEEcCccCCCCC-----ccceEEE
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEFE-----PQRVAAY 243 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~y 243 (1436)
+..+++.+++|+|+|++|++||+++|+||||||||||+++|+|..+ |....+|+|+++|.++.... .++.++|
T Consensus 11 l~~~~~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~ 90 (251)
T PRK14244 11 LNLWYGSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGM 90 (251)
T ss_pred EEEEECCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEE
Confidence 3334445679999999999999999999999999999999999976 21123899999998764321 2457899
Q ss_pred EcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc
Q 038815 244 ISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI 323 (1436)
Q Consensus 244 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 323 (1436)
++|++.+++. ||+||+.+....++.... . .+....++.+++.+||.+
T Consensus 91 v~q~~~~~~~-tv~~ni~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~ 137 (251)
T PRK14244 91 VFQKPNPFPK-SIYDNVAYGPKLHGLAKN--------K------------------------KKLDEIVEKSLTSVGLWE 137 (251)
T ss_pred EecCcccccC-CHHHHHHHHHHhcCCCCC--------H------------------------HHHHHHHHHHHHHcCCCc
Confidence 9999888875 999999876432211000 0 001123456788999865
Q ss_pred cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 038815 324 CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 398 (1436)
Q Consensus 324 ~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 398 (1436)
...+.+ +..++.|||||||||+||+++ +++|||||+|||+.+...+.+.|+++. .+ .+|+.++|...++.+
T Consensus 138 ~~~~~~-~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~ 213 (251)
T PRK14244 138 ELGDRL-KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--KN-FTIIVVTHSMKQAKK 213 (251)
T ss_pred hhhhHh-hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHh
Confidence 322222 234668999999999998766 599999999999999999999999874 24 455567888889999
Q ss_pred hcCeEEEecCCeEEEecChHHHH
Q 038815 399 LFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 399 lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
++|+|++|++|++++.|+.+++.
T Consensus 214 ~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 214 VSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred hcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999987653
No 398
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=2.6e-31 Score=285.26 Aligned_cols=193 Identities=26% Similarity=0.351 Sum_probs=166.2
Q ss_pred ccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccc----cccceEEEeccCCCC
Q 038815 888 HEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQE----TFTRISGYCEQNDIH 963 (1436)
Q Consensus 888 ~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d~~ 963 (1436)
..+...+++|||+.+++||++||+||||||||||+|+|+|..+ +.+|+|.++|.++... ..+.-++--+|...+
T Consensus 13 ~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rl 90 (250)
T COG0411 13 RFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTFQITRL 90 (250)
T ss_pred ecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeecccccc
Confidence 3467889999999999999999999999999999999999876 4579999999876432 234567889999999
Q ss_pred CCCCCHHHHHHHhhhhc--------CCCC-CCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHh
Q 038815 964 SPLVTVYESLLYSAWLR--------LPPE-VDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELV 1034 (1436)
Q Consensus 964 ~~~lTv~E~l~f~a~lr--------~~~~-~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~ 1034 (1436)
++.+||.||+..++..+ .+.. ...++-.++..++|+.+||.+.+|...| +||+||||||.|||||+
T Consensus 91 F~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa 165 (250)
T COG0411 91 FPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALA 165 (250)
T ss_pred cCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHh
Confidence 99999999998875533 2211 1234456678899999999999999864 69999999999999999
Q ss_pred hCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1035 ANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1035 ~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
++|++|+||||.+||.+..+..+.+.|+++.+. |.||+++-|+.. -++...|+
T Consensus 166 ~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dr 219 (250)
T COG0411 166 TQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADR 219 (250)
T ss_pred cCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccE
Confidence 999999999999999999999999999999884 799999999986 48888888
No 399
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=297.61 Aligned_cols=204 Identities=24% Similarity=0.264 Sum_probs=160.6
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~---~~~G~i~i~g 942 (1436)
.+.++|+++.+. ++.+|+|+|+.+++||+++|+||||||||||+++|+|..+.. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 356777776542 346999999999999999999999999999999999975431 3579999999
Q ss_pred eecc----cccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 038815 943 YLKK----QETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSG 1018 (1436)
Q Consensus 943 ~~~~----~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1018 (1436)
.+.. ....++.+||++|++.+++ .||+||+.+...... ....+...+.++++++.+++.+........ .+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKS-HAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhc-Cccc
Confidence 7652 1234567999999988887 899999987643321 112233345677888888885422111111 1467
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1019 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1019 lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||||||+||++|+.+|++|+|||||+|||+.+...+++.|+++++ ++|||+++|++. ++.+..|+
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~ 213 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDR 213 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999999876 689999999985 56777787
No 400
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.8e-31 Score=312.94 Aligned_cols=175 Identities=24% Similarity=0.364 Sum_probs=153.0
Q ss_pred ceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc-------ccccceEEEeccCCCCCCCCCH
Q 038815 897 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ-------ETFTRISGYCEQNDIHSPLVTV 969 (1436)
Q Consensus 897 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~d~~~~~lTv 969 (1436)
|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.+|||+|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999865 357999999976432 1245789999999999999999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCC
Q 038815 970 YESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1049 (1436)
Q Consensus 970 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgL 1049 (1436)
+||+.|... ....+.++++++.+||.+..+.. +..|||||||||+|||+|+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRY-----PGSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 11234688999999998877776 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1050 DARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1050 D~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|+.++..+++.|+++.++ |.|||+++|++. ++.+..|+
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~ 198 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADR 198 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCE
Confidence 999999999999999875 899999999984 67788888
No 401
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.6e-30 Score=299.68 Aligned_cols=206 Identities=22% Similarity=0.251 Sum_probs=163.5
Q ss_pred CceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEE
Q 038815 864 PHSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSITI 940 (1436)
Q Consensus 864 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~---~~~~G~i~i 940 (1436)
...++++|+++.+. ++.+|+|+|+.|++||+++|+||||||||||+++|+|.... .+.+|+|.+
T Consensus 23 ~~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i 89 (272)
T PRK14236 23 QTALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRL 89 (272)
T ss_pred CcEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEE
Confidence 34688999988653 24699999999999999999999999999999999998542 135899999
Q ss_pred cCeeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC
Q 038815 941 SGYLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPG 1015 (1436)
Q Consensus 941 ~g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1015 (1436)
+|.+... ..+++.++|++|+..+++. |++||+.+....+. ....+...+.++++++.+++.+......+. .
T Consensus 90 ~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~ 165 (272)
T PRK14236 90 DGQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHE-N 165 (272)
T ss_pred CCEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhC-C
Confidence 9986532 2346789999999888875 99999987654321 112223345678889999986421111111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|++. ++.+..|+
T Consensus 166 ~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~ 236 (272)
T PRK14236 166 AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDY 236 (272)
T ss_pred cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCE
Confidence 468999999999999999999999999999999999999999999999976 799999999975 46667787
No 402
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=99.97 E-value=5.9e-31 Score=295.93 Aligned_cols=187 Identities=24% Similarity=0.283 Sum_probs=153.1
Q ss_pred EeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC--eeEEEEEEcCeecccccc-cceEEEeccCCC--CCCCCC
Q 038815 894 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGSITISGYLKKQETF-TRISGYCEQNDI--HSPLVT 968 (1436)
Q Consensus 894 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~d~--~~~~lT 968 (1436)
+|+|+|+.+++|++++|+||||||||||+++|+|..++. +.+|+|.++|.+...... ++.++|++|+.. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999986531 158999999987643222 357999999974 567789
Q ss_pred HHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc---ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCC
Q 038815 969 VYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP---LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1045 (1436)
Q Consensus 969 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEP 1045 (1436)
+.|++.+...... ...+...+.++++++.+++.+ ..+.. +..|||||||||+||++|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543321 112333456889999999973 44444 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhhh
Q 038815 1046 TSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1046 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
|+|||..+...+.+.|++++++ |+|||+++|+++ ++....|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i 196 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEV 196 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 9999999999999999998764 899999999986 566777873
No 403
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.3e-30 Score=297.18 Aligned_cols=213 Identities=24% Similarity=0.355 Sum_probs=161.7
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcccEEEEcCccCCCC-----CccceEEE
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDS--SLKVSGRVTYNGHNMDEF-----EPQRVAAY 243 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~y 243 (1436)
+..+++++++|+|+|++|++||+++|+|||||||||||++|+|..++ ....+|+|.++|+++... ..++.++|
T Consensus 9 l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~ 88 (250)
T PRK14240 9 LDLFYGDFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGM 88 (250)
T ss_pred EEEEECCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEE
Confidence 33444445799999999999999999999999999999999998753 212489999999987531 12456899
Q ss_pred EcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc
Q 038815 244 ISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI 323 (1436)
Q Consensus 244 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 323 (1436)
++|++.+++ +||+||+.++....+... .. +....++.+++.+++.+
T Consensus 89 ~~q~~~~~~-~t~~~ni~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~ 134 (250)
T PRK14240 89 VFQQPNPFP-MSIYDNVAYGPRTHGIKD---------KK------------------------KLDEIVEKSLKGAALWD 134 (250)
T ss_pred EecCCccCc-ccHHHHHHHHHHhcCCCC---------HH------------------------HHHHHHHHHHHHcCCch
Confidence 999988887 899999998643322100 00 01122455677777642
Q ss_pred cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 038815 324 CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 398 (1436)
Q Consensus 324 ~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 398 (1436)
...... +..++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ +. +|+.++|+.+++.+
T Consensus 135 ~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~-tiii~sH~~~~~~~ 210 (250)
T PRK14240 135 EVKDRL-KKSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK--DY-TIVIVTHNMQQASR 210 (250)
T ss_pred hhHHHH-hcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CC-eEEEEEeCHHHHHh
Confidence 111111 244568999999999998766 5999999999999999999999998742 44 55557788888999
Q ss_pred hcCeEEEecCCeEEEecChHHHH
Q 038815 399 LFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 399 lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
++|+|++|++|++++.|+.+++.
T Consensus 211 ~~d~v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 211 ISDKTAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred hCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999887753
No 404
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=8.2e-31 Score=291.60 Aligned_cols=182 Identities=24% Similarity=0.361 Sum_probs=151.9
Q ss_pred ceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc-------ccccceEEEeccCCCC
Q 038815 891 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ-------ETFTRISGYCEQNDIH 963 (1436)
Q Consensus 891 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~d~~ 963 (1436)
++.+ |||+.+++ |+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|+..+
T Consensus 12 ~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 86 (214)
T cd03297 12 DFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYAL 86 (214)
T ss_pred Ceee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCcc
Confidence 3444 99999999 9999999999999999999999865 357999999976431 1245679999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceec
Q 038815 964 SPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1043 (1436)
Q Consensus 964 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lD 1043 (1436)
++.+|++|++.+..... ......+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+||
T Consensus 87 ~~~~t~~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllD 156 (214)
T cd03297 87 FPHLNVRENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLD 156 (214)
T ss_pred CCCCCHHHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 88999999998764321 2233445688999999998766654 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1044 EPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1044 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||+.+...+.+.|++++++ |+|||+++|++. ++-+..|+
T Consensus 157 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 201 (214)
T cd03297 157 EPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADR 201 (214)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCE
Confidence 999999999999999999999875 899999999975 34455665
No 405
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=8.6e-31 Score=302.47 Aligned_cols=201 Identities=24% Similarity=0.303 Sum_probs=165.4
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.++.. ....+|+|||+.+++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 47788888765310 12359999999999999999999999999999999999875 4579999999875
Q ss_pred cc---ccccceEEEeccCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 946 KQ---ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
.. ...++.+||++|++. .++..||.||+.+..... ....++..+.++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 42 234677999999963 566789999998764422 123344445788999999998877765 457999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++.. + ...|+
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~ 209 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDR 209 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCE
Confidence 9999999999999999999999999999999999999999999875 9999999999875 3 24677
No 406
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=99.97 E-value=1.1e-30 Score=299.95 Aligned_cols=214 Identities=29% Similarity=0.403 Sum_probs=164.9
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-----CCcccEEEEcCccCCCCCc---cceEE
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS-----LKVSGRVTYNGHNMDEFEP---QRVAA 242 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~-----~~~~G~I~~~G~~~~~~~~---~~~~~ 242 (1436)
+..+.+++.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|.++..... ++.++
T Consensus 7 l~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 86 (272)
T PRK13547 7 LHVARRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRA 86 (272)
T ss_pred EEEEECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcE
Confidence 334444567999999999999999999999999999999999999874 1238999999998754332 34589
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++..++.+||+||+.++...... ... ... .+....++.+++.+||+
T Consensus 87 ~v~q~~~~~~~~tv~e~l~~~~~~~~~--~~~---~~~-------------------------~~~~~~~~~~l~~~~l~ 136 (272)
T PRK13547 87 VLPQAAQPAFAFSAREIVLLGRYPHAR--RAG---ALT-------------------------HRDGEIAWQALALAGAT 136 (272)
T ss_pred EecccCCCCCCCcHHHHHhhccccccc--ccc---cCC-------------------------HHHHHHHHHHHHHcCcH
Confidence 999998766779999999875311100 000 000 00112356688899997
Q ss_pred ccccccccCcccCCCCHHHHHHHhhh--------------hhhhhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEE
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTG--------------PALALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVIS 388 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia--------------~a~vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~ 388 (1436)
+..++ .+..|||||||||+|| .|.+|+|||||+|||+.+...+.+.|+++.+..+ ++|+.
T Consensus 137 ~~~~~-----~~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvii 210 (272)
T PRK13547 137 ALVGR-----DVTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWN-LGVLA 210 (272)
T ss_pred hhhcC-----CcccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcC-CEEEE
Confidence 65443 4557999999999994 4556999999999999999999999999865334 45555
Q ss_pred EecChhhHHhhcCeEEEecCCeEEEecChHHH
Q 038815 389 LLQPAPETYDLFDDIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 389 ~~q~~~~~~~lfD~vilL~~G~iv~~G~~~~~ 420 (1436)
++|+.+++.+++|++++|++|++++.|+.+++
T Consensus 211 isH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 242 (272)
T PRK13547 211 IVHDPNLAARHADRIAMLADGAIVAHGAPADV 242 (272)
T ss_pred EECCHHHHHHhCCEEEEEECCeEEEecCHHHH
Confidence 77888889999999999999999999998776
No 407
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=99.97 E-value=1.9e-30 Score=296.09 Aligned_cols=206 Identities=22% Similarity=0.252 Sum_probs=161.1
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcccEEEEcCccCCCCCc-cceEEEEcCCCC--CCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSL-KVSGRVTYNGHNMDEFEP-QRVAAYISQHDN--HIG 252 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~-~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 252 (1436)
++++|+|+|+++++||+++|+||||||||||+++|+|.++|.. ..+|+|.++|.++..... ++.++|++|++. +.+
T Consensus 15 ~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~ 94 (254)
T PRK10418 15 AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNP 94 (254)
T ss_pred ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCc
Confidence 3569999999999999999999999999999999999998710 139999999998754332 256999999974 456
Q ss_pred CCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCc
Q 038815 253 EMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDE 332 (1436)
Q Consensus 253 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 332 (1436)
.+|+.+++.+.++..+.. . ....++.+++.+||.+.. + +-+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~----------~--------------------------~~~~~~~~l~~~~l~~~~-~-~~~~ 136 (254)
T PRK10418 95 LHTMHTHARETCLALGKP----------A--------------------------DDATLTAALEAVGLENAA-R-VLKL 136 (254)
T ss_pred cccHHHHHHHHHHHcCCC----------h--------------------------HHHHHHHHHHHcCCCChh-h-hhhc
Confidence 689999987643221100 0 012245678899997521 1 1124
Q ss_pred ccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
.+..|||||||||+||+++ +|+|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.+.+|++++|+
T Consensus 137 ~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~~l~ 215 (254)
T PRK10418 137 YPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVAVMS 215 (254)
T ss_pred CCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEEEEE
Confidence 4567999999999998766 59999999999999999999999998653 34556667888888999999999999
Q ss_pred CCeEEEecChHHHH
Q 038815 408 DGLIVYLGPRELVL 421 (1436)
Q Consensus 408 ~G~iv~~G~~~~~~ 421 (1436)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (254)
T PRK10418 216 HGRIVEQGDVETLF 229 (254)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999988763
No 408
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.3e-30 Score=298.45 Aligned_cols=215 Identities=19% Similarity=0.270 Sum_probs=163.9
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEEcCccCCCC--C---ccceE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF--E---PQRVA 241 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~--~---~~~~~ 241 (1436)
+++..++++.++|+|+|++|++||+++|+|||||||||||++|+|.++ |....+|+|.++|.++... . .++.+
T Consensus 17 ~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i 96 (260)
T PRK10744 17 RNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKV 96 (260)
T ss_pred EEEEEEeCCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcce
Confidence 344444445679999999999999999999999999999999999986 2112389999999887421 1 24579
Q ss_pred EEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCC
Q 038815 242 AYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGL 321 (1436)
Q Consensus 242 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL 321 (1436)
+|++|++.+++ +||+||+.+....... ... .+....++.+++.+||
T Consensus 97 ~~~~q~~~~~~-~tv~~nl~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~~l 142 (260)
T PRK10744 97 GMVFQKPTPFP-MSIYDNIAFGVRLFEK---------LSR------------------------AEMDERVEWALTKAAL 142 (260)
T ss_pred EEEecCCccCc-CcHHHHHhhhHhhcCC---------CCH------------------------HHHHHHHHHHHHHcCC
Confidence 99999988777 8999999886432210 000 0011235667888887
Q ss_pred cccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 038815 322 DICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPET 396 (1436)
Q Consensus 322 ~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~ 396 (1436)
........ ++.+..|||||||||+||+++ +++|||||+|||..++..+.+.|+++.. + ++||.++|+..++
T Consensus 143 ~~~~~~~~-~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiii~sH~~~~~ 218 (260)
T PRK10744 143 WNEVKDKL-HQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ--D-YTVVIVTHNMQQA 218 (260)
T ss_pred ChhhHHHH-hcCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHH
Confidence 42111111 234568999999999998776 4999999999999999999999998742 4 4566678888889
Q ss_pred HhhcCeEEEecCCeEEEecChHHHH
Q 038815 397 YDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 397 ~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
.+++|++++|++|+++..|+.+++.
T Consensus 219 ~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 219 ARCSDYTAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred HHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999988763
No 409
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.5e-30 Score=297.85 Aligned_cols=200 Identities=22% Similarity=0.297 Sum_probs=161.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC-e--eEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~-~--~~G~i~i~g 942 (1436)
.+.++|+++.+. ++.+|+|+|+.++|||+++|+|+||||||||+++|+|..+.. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 477888887653 246999999999999999999999999999999999975432 2 479999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 1013 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1013 (1436)
.+... ...++.++|++|++.+++ .||+||+.+....+. ..+..+..+.++++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 86531 234567999999988887 899999987654332 1123333456788899998853 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1014 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1014 ~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~ 218 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDF 218 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCe
Confidence 468999999999999999999999999999999999999999999999865 699999999975 56667777
No 410
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=9.2e-31 Score=300.95 Aligned_cols=214 Identities=23% Similarity=0.330 Sum_probs=162.7
Q ss_pred ccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEEcCccCCCC-----Cccce
Q 038815 168 LQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSL--KVSGRVTYNGHNMDEF-----EPQRV 240 (1436)
Q Consensus 168 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~ 240 (1436)
++++..+++.+.+|+|+|++|++||+++|+|||||||||||++|+|.+++.. ..+|+|.++|.++... ..++.
T Consensus 16 i~nl~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~ 95 (269)
T PRK14259 16 LQNVTISYGTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRR 95 (269)
T ss_pred EEeEEEEECCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhc
Confidence 3445555555679999999999999999999999999999999999986310 1399999999886421 12356
Q ss_pred EEEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcC
Q 038815 241 AAYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLG 320 (1436)
Q Consensus 241 ~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg 320 (1436)
++|++|++.+++ .||+||+.+++...+.. . +.+..++.+++.++
T Consensus 96 i~~v~q~~~l~~-~tv~enl~~~~~~~~~~----------~-------------------------~~~~~~~~~l~~~~ 139 (269)
T PRK14259 96 IGMVFQQPNPFP-KSIYENIAFGARINGYT----------G-------------------------DMDELVERSLRKAA 139 (269)
T ss_pred eEEEccCCccch-hhHHHHHhhhhhhcCCc----------H-------------------------HHHHHHHHHHHHhC
Confidence 999999998887 59999999865432110 0 00112344567776
Q ss_pred CcccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhh
Q 038815 321 LDICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPE 395 (1436)
Q Consensus 321 L~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~ 395 (1436)
+...... .-+..++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ + ++||.++|+..+
T Consensus 140 l~~~l~~-~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~ 215 (269)
T PRK14259 140 VWDECKD-KLNESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK--N-FTIVIVTHNMQQ 215 (269)
T ss_pred Ccchhhh-hhCCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHH
Confidence 6421111 11345668999999999998776 5999999999999999999999998742 4 456667888899
Q ss_pred HHhhcCeEEEecC-----------CeEEEecChHHHH
Q 038815 396 TYDLFDDIILLSD-----------GLIVYLGPRELVL 421 (1436)
Q Consensus 396 ~~~lfD~vilL~~-----------G~iv~~G~~~~~~ 421 (1436)
+.+++|++++|++ |++++.|+++++.
T Consensus 216 ~~~~~d~i~~l~~~~~~~~~~g~~g~~~~~~~~~~~~ 252 (269)
T PRK14259 216 AVRVSDMTAFFNAEEVEGGSGGKVGYLVEFNETKKIF 252 (269)
T ss_pred HHHhcCEEEEEeccccccccccccceEEEeCCHHHHH
Confidence 9999999999996 6789999998874
No 411
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=99.97 E-value=8.9e-31 Score=327.34 Aligned_cols=201 Identities=26% Similarity=0.327 Sum_probs=166.5
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++++|+++.+. ++.+|+|+|+.+++||++||+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67788877653 3569999999999999999999999999999999999865 34799999997653
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 947 QE----TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLP-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 947 ~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
.. ..++.+||++|+..+++.+||+|++.+....+.. ...+.++.++.++++++.+||.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 21 1245699999999889999999999886432211 11223334456889999999988777664 57999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++++.|.|||+++|++. ++-+..|+
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~ 210 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDD 210 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999999877999999999974 46667787
No 412
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.8e-30 Score=299.34 Aligned_cols=215 Identities=26% Similarity=0.312 Sum_probs=167.2
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCCC----ccceEE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEFE----PQRVAA 242 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~~----~~~~~~ 242 (1436)
+++..+++.+++|+|+|++|++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++.+.. .++.++
T Consensus 25 ~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~ 104 (276)
T PRK14271 25 VNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVG 104 (276)
T ss_pred eeEEEEECCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheE
Confidence 44555556678999999999999999999999999999999999998751 123899999998875431 245789
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++.+++ +||+||+.++...... ... .+....+..+++.+||.
T Consensus 105 ~v~q~~~l~~-~tv~eni~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~~l~ 150 (276)
T PRK14271 105 MLFQRPNPFP-MSIMDNVLAGVRAHKL---------VPR------------------------KEFRGVAQARLTEVGLW 150 (276)
T ss_pred EeccCCccCC-ccHHHHHHHHHHhccC---------CCH------------------------HHHHHHHHHHHHHcCCC
Confidence 9999988887 8999999876432110 000 00112235567888886
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
+..++.. +..++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.
T Consensus 151 ~~~~~~l-~~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~ 226 (276)
T PRK14271 151 DAVKDRL-SDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAA 226 (276)
T ss_pred chhhhHh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHH
Confidence 5332222 245668999999999998776 5999999999999999999999998753 3 46666788889999
Q ss_pred hhcCeEEEecCCeEEEecChHHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+++|++++|++|++++.|+++++.
T Consensus 227 ~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 227 RISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999988764
No 413
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.2e-30 Score=300.52 Aligned_cols=203 Identities=22% Similarity=0.360 Sum_probs=160.0
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+. +++.+|+|+|+.+++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 578888887653 12469999999999999999999999999999999999865 3579999999875
Q ss_pred ccccccceEEEeccCCCCC--CCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 038815 946 KQETFTRISGYCEQNDIHS--PLVTVYESLLYSAWLRLP-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTE 1022 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d~~~--~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1022 (1436)
.....++.++|++|+..+. ...+++|++.+....... .........+.++++++.+||.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234699999997542 234788988653211000 00111223446788999999988777764 579999
Q ss_pred HHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1023 qrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~ 211 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDY 211 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999877999999999974 45566666
No 414
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.2e-30 Score=295.58 Aligned_cols=201 Identities=24% Similarity=0.275 Sum_probs=160.1
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCe---eEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~---~~G~i~i~g 942 (1436)
.+.++|+++.++ ++.+|+|+|+.+++||+++|+||||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 356777776542 3569999999999999999999999999999999999764322 379999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 1013 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1013 (1436)
.+... ..+++.+||++|++.+++.+|++||+.+...... ....++..+.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 86532 2345679999999999999999999987543221 1122333455677777777642 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1014 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1014 ~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
++.||||||||++||++|+.+|++|+|||||+|||..+...+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~ 216 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDT 216 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCE
Confidence 467999999999999999999999999999999999999999999999864 799999999976 46666787
No 415
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.2e-30 Score=295.56 Aligned_cols=215 Identities=23% Similarity=0.299 Sum_probs=162.6
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEEcCccCCCC-----CccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSL--KVSGRVTYNGHNMDEF-----EPQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~ 242 (1436)
++..+++++++|+|+|+.|++||+++|+||||||||||||+|+|.++|.. ..+|+|.++|.++... ..++.++
T Consensus 9 ~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 88 (252)
T PRK14272 9 DVNIYYGDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVG 88 (252)
T ss_pred eeEEEECCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeE
Confidence 34444445679999999999999999999999999999999999987531 1379999999887531 1235689
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++.+++.+||.||+.++....+... + ++.....+..++.+++.
T Consensus 89 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~----------~-----------------------~~~~~~~~~~l~~~~l~ 135 (252)
T PRK14272 89 MVFQKPNPFPTMSVFDNVVAGLKLAGIRD----------R-----------------------DHLMEVAERSLRGAALW 135 (252)
T ss_pred EEeccCccCcCCCHHHHHHHHHHhcCCCC----------H-----------------------HHHHHHHHHHHHHcCcc
Confidence 99999999999999999987543221100 0 00111233445555553
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
..... .-+..++.|||||||||+||+++ +++|||||+|||..++..+.+.|+++.+ + ++++.++|+..++.
T Consensus 136 ~~l~~-~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~ 211 (252)
T PRK14272 136 DEVKD-RLKTPATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--V-TTIIIVTHNMHQAA 211 (252)
T ss_pred hhhhh-hhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHH
Confidence 21100 01234567999999999998766 5999999999999999999999998742 4 55666788888999
Q ss_pred hhcCeEEEecCCeEEEecChHHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+++|+|++|++|++++.|+++++.
T Consensus 212 ~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 212 RVSDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred HhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999988764
No 416
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.6e-30 Score=296.05 Aligned_cols=213 Identities=22% Similarity=0.314 Sum_probs=162.0
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCC-C---CccceEEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDE-F---EPQRVAAY 243 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~-~---~~~~~~~y 243 (1436)
++..+++++.+|+|+|+.|++||+++|+||||||||||+++|+|..++. ...+|+|.++|.++.. . ..++.++|
T Consensus 8 ~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~ 87 (249)
T PRK14253 8 NLDLFYGENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGM 87 (249)
T ss_pred ccEEEECCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeE
Confidence 3344444567999999999999999999999999999999999998752 1238999999987642 1 12456999
Q ss_pred EcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc
Q 038815 244 ISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI 323 (1436)
Q Consensus 244 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 323 (1436)
++|++.+++ .||.||+.++....+... +. .....++..++.+|+.+
T Consensus 88 ~~q~~~~~~-~tv~~~l~~~~~~~~~~~---------~~------------------------~~~~~~~~~~~~~~l~~ 133 (249)
T PRK14253 88 VFQKPNPFP-MSIYENVAYGLRAQGIKD---------KK------------------------VLDEVVERSLRGAALWD 133 (249)
T ss_pred EecCCCcCc-ccHHHHHHhHHHhcCCCc---------hH------------------------HHHHHHHHHHHHcCCch
Confidence 999988887 899999988643221100 00 01122345667777753
Q ss_pred cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 038815 324 CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 398 (1436)
Q Consensus 324 ~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 398 (1436)
...... +..+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++ + ++|+.++|+..++.+
T Consensus 134 ~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~ 209 (249)
T PRK14253 134 EVKDRL-KSHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARR 209 (249)
T ss_pred hhhHHh-hcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHH
Confidence 221111 344668999999999998766 4999999999999999999999999753 3 455567788889999
Q ss_pred hcCeEEEecCCeEEEecChHHH
Q 038815 399 LFDDIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 399 lfD~vilL~~G~iv~~G~~~~~ 420 (1436)
.+|++++|++|++++.|+.+++
T Consensus 210 ~~d~i~~l~~G~i~~~g~~~~~ 231 (249)
T PRK14253 210 ISDRTAFFLMGELVEHDDTQVI 231 (249)
T ss_pred hCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999988765
No 417
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.8e-30 Score=295.93 Aligned_cols=205 Identities=21% Similarity=0.259 Sum_probs=163.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~---~~~G~i~i~g 942 (1436)
.++++|+++.+. +..+|+|+|+.+++||++||+|+||||||||+++|+|...+. ..+|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478888887653 236999999999999999999999999999999999976532 2469999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVS 1017 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1017 (1436)
.+... ...++.++|++|+..+++ .|++||+.+....... .+..+..+.++++++.+++.+..+...+. .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 76421 234567999999988887 8999999876433211 12233345688999999986432222222 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++||++|+.+|++|+|||||+|||..+...+.+.|+++++ .|+|||+++|++. ++-+..|+
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~ 220 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDF 220 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCE
Confidence 8999999999999999999999999999999999999999999999875 4899999999985 57778888
No 418
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.4e-30 Score=298.24 Aligned_cols=204 Identities=22% Similarity=0.266 Sum_probs=163.8
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~---~~~~G~i~i~g 942 (1436)
.+.++|+++.++ ++.+|+|+|+.+++||+++|+|+||||||||+++|+|..++ ++.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 578899988763 35799999999999999999999999999999999997542 13589999999
Q ss_pred eeccc----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 038815 943 YLKKQ----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSG 1018 (1436)
Q Consensus 943 ~~~~~----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1018 (1436)
.+... ...++.++|++|+..+++ .||+||+.+...... ..+.++....++++++.++|.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 86532 234667999999988887 899999987643221 12333444566788999998753322211 12468
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1019 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1019 lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dr 231 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDR 231 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999999876 589999999975 56677787
No 419
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.3e-30 Score=293.82 Aligned_cols=213 Identities=20% Similarity=0.245 Sum_probs=163.0
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCC-----CccceEEE
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----EPQRVAAY 243 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~y 243 (1436)
+..++.++.+|+|+|++|++|++++|+|||||||||||++|+|.++|. .+.+|+|.++|.++... ..++.++|
T Consensus 10 l~~~~~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~ 89 (251)
T PRK14249 10 VNFFYHKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGM 89 (251)
T ss_pred EEEEECCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEE
Confidence 334444567999999999999999999999999999999999999874 12369999999886432 12467999
Q ss_pred EcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc
Q 038815 244 ISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI 323 (1436)
Q Consensus 244 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 323 (1436)
++|++.+++. ||+||+.++...++... .+ +.....+..++.+||.+
T Consensus 90 v~q~~~~~~~-tv~enl~~~~~~~~~~~----------~~-----------------------~~~~~~~~~l~~~~l~~ 135 (251)
T PRK14249 90 VFQQPNPFPK-SIFDNVAFGPRMLGTTA----------QS-----------------------RLDEVVEKSLRQAALWD 135 (251)
T ss_pred EecCCccCcC-cHHHHHhhHHHhcCCCh----------hh-----------------------HHHHHHHHHHHHhCCch
Confidence 9999988875 99999998654321100 00 01112344566667643
Q ss_pred cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 038815 324 CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 398 (1436)
Q Consensus 324 ~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 398 (1436)
..... .+..+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.+
T Consensus 136 ~l~~~-~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tilivsh~~~~~~~ 211 (251)
T PRK14249 136 EVKDN-LHKSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK--QN-YTIAIVTHNMQQAAR 211 (251)
T ss_pred hhhhH-hhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHh
Confidence 21111 2345678999999999998776 499999999999999999999999873 24 556667888999999
Q ss_pred hcCeEEEecCCeEEEecChHHHH
Q 038815 399 LFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 399 lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
++|++++|++|++++.|+.+++.
T Consensus 212 ~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 212 ASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred hCCEEEEEeCCeEEEeCCHHHHH
Confidence 99999999999999999988763
No 420
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=99.97 E-value=1.1e-30 Score=338.59 Aligned_cols=201 Identities=27% Similarity=0.391 Sum_probs=159.3
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGE 253 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 253 (1436)
++++|+|+|++|+|||.++|+||||||||||+|+|+|.++|+ +|+|.+||+++++..+ ++.++||+|++.+|+
T Consensus 465 ~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~- 540 (686)
T TIGR03797 465 GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS- 540 (686)
T ss_pred CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-
Confidence 357999999999999999999999999999999999999998 9999999999987664 578999999997776
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM 333 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 333 (1436)
.|++|||.++.. . +.+...++....+ .+..++ .+++..||.+|+.
T Consensus 541 gTI~eNi~~~~~-~-------------------------~~e~i~~al~~a~------l~~~i~--~lp~G~dt~ige~- 585 (686)
T TIGR03797 541 GSIFENIAGGAP-L-------------------------TLDEAWEAARMAG------LAEDIR--AMPMGMHTVISEG- 585 (686)
T ss_pred ccHHHHHhcCCC-C-------------------------CHHHHHHHHHHcC------cHHHHH--hccccccccccCC-
Confidence 599999988521 0 0011111111000 111122 2566789999965
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
...||||||||++||||+ +++||||||+||+.+..++.+.|++. ++|+|+ ++|.. +..+.+|+|++|++
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~Ii-ItHr~-~~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIV-IAHRL-STIRNADRIYVLDA 659 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEE-EecCh-HHHHcCCEEEEEEC
Confidence 468999999999999877 49999999999999999999999874 456655 45544 55677999999999
Q ss_pred CeEEEecChHHHHH
Q 038815 409 GLIVYLGPRELVLD 422 (1436)
Q Consensus 409 G~iv~~G~~~~~~~ 422 (1436)
|++++.|+++++.+
T Consensus 660 G~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 660 GRVVQQGTYDELMA 673 (686)
T ss_pred CEEEEECCHHHHHh
Confidence 99999999998763
No 421
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=99.97 E-value=1.2e-30 Score=301.54 Aligned_cols=207 Identities=30% Similarity=0.450 Sum_probs=169.1
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCcc---ceEEEEcCCCCCCCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQ---RVAAYISQHDNHIGE 253 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~ 253 (1436)
++++|+|+||.+.+||-++|+||||||||||.|+|.|..+|. +|.|.++|.+++.+++. +.+||.||+-.+|+.
T Consensus 348 ~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~G 424 (580)
T COG4618 348 KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDG 424 (580)
T ss_pred CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecCC
Confidence 467999999999999999999999999999999999999987 99999999999888764 789999999888875
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM 333 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 333 (1436)
||.|||.= .. ++.|.+...+++...+. + |. ++.|++.+||.||+.
T Consensus 425 -TIaeNIaR---f~----------------------~~~d~~kIieAA~lAgv-H----el---Il~lP~GYdT~iG~~- 469 (580)
T COG4618 425 -TIAENIAR---FG----------------------EEADPEKVIEAARLAGV-H----EL---ILRLPQGYDTRIGEG- 469 (580)
T ss_pred -cHHHHHHh---cc----------------------ccCCHHHHHHHHHHcCh-H----HH---HHhCcCCccCccCCC-
Confidence 99999951 11 12233334444332221 1 22 456999999999975
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
..+||||||||+++|||+ +++||||-++||+.....+.+.+.+... .++|+|+.. | .+.+...+|+|++|++
T Consensus 470 G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvvia-H-RPs~L~~~Dkilvl~~ 546 (580)
T COG4618 470 GATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVVIA-H-RPSALASVDKILVLQD 546 (580)
T ss_pred CCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEEEe-c-CHHHHhhcceeeeecC
Confidence 458999999999998876 5999999999999999999999998643 456665543 3 4678899999999999
Q ss_pred CeEEEecChHHHHHHH
Q 038815 409 GLIVYLGPRELVLDFF 424 (1436)
Q Consensus 409 G~iv~~G~~~~~~~~F 424 (1436)
|++-.+|++++++...
T Consensus 547 G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 547 GRIAAFGPREEVLAKV 562 (580)
T ss_pred ChHHhcCCHHHHHHHh
Confidence 9999999999998754
No 422
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=99.97 E-value=8.3e-31 Score=332.86 Aligned_cols=211 Identities=27% Similarity=0.397 Sum_probs=167.4
Q ss_pred ccccccc-cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEc
Q 038815 170 ILPTRKK-HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYIS 245 (1436)
Q Consensus 170 ~~~~~~~-~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~ 245 (1436)
++.-+++ ++++|+|+|++++|||.++|+||+|||||||++.|.|.++|+ +|+|.+||.++++... ++.++||+
T Consensus 333 ~vsf~y~~~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~ 409 (567)
T COG1132 333 NVSFSYPGKKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVS 409 (567)
T ss_pred EEEEEcCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEc
Confidence 3444444 578999999999999999999999999999999999999997 9999999999887755 57899999
Q ss_pred CCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccc
Q 038815 246 QHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICA 325 (1436)
Q Consensus 246 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 325 (1436)
|++.+|. -||+|||.++.. +...++..++.... ..+..+. .+++..
T Consensus 410 Qd~~LF~-~TI~~NI~~g~~-------------------------~at~eei~~a~k~a------~~~d~I~--~lp~g~ 455 (567)
T COG1132 410 QDPLLFS-GTIRENIALGRP-------------------------DATDEEIEEALKLA------NAHEFIA--NLPDGY 455 (567)
T ss_pred ccceeec-ccHHHHHhcCCC-------------------------CCCHHHHHHHHHHh------ChHHHHH--hCcccc
Confidence 9988887 799999998631 01111222221111 0122233 357788
Q ss_pred cccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 038815 326 DTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLF 400 (1436)
Q Consensus 326 ~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lf 400 (1436)
||.||+ ....||||||||++||||. +|+||||||+||+.+...|.+.+++.. .++|+++ +.|..+.+.+ +
T Consensus 456 dt~vge-~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRlsti~~-a 530 (567)
T COG1132 456 DTIVGE-RGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRLSTIKN-A 530 (567)
T ss_pred cceecC-CCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccHhHHHh-C
Confidence 999994 4567999999999999887 499999999999999999999999764 3467777 5665555554 9
Q ss_pred CeEEEecCCeEEEecChHHHHH
Q 038815 401 DDIILLSDGLIVYLGPRELVLD 422 (1436)
Q Consensus 401 D~vilL~~G~iv~~G~~~~~~~ 422 (1436)
|+|++|++|++++.|+++++..
T Consensus 531 D~IiVl~~G~i~e~G~h~eLl~ 552 (567)
T COG1132 531 DRIIVLDNGRIVERGTHEELLA 552 (567)
T ss_pred CEEEEEECCEEEEecCHHHHHH
Confidence 9999999999999999999875
No 423
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.3e-30 Score=326.70 Aligned_cols=202 Identities=26% Similarity=0.289 Sum_probs=165.7
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+. ++.+|+|+|+.+++||++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 367788877652 3569999999999999999999999999999999999865 3579999999865
Q ss_pred ccc----cccceEEEeccCCCCCCCCCHHHHHHHhhhhc----CCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 038815 946 KQE----TFTRISGYCEQNDIHSPLVTVYESLLYSAWLR----LPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVS 1017 (1436)
Q Consensus 946 ~~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1017 (1436)
... ..++.+|||+|+..+++.+||+|++.+..... .....+.++..+.++++++.+||.+..+..+ +
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 321 12356999999998889999999998753211 0001123344567889999999988777764 5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++|.|||+++|++. .+-+..|+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~ 214 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDR 214 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 79999999999999999999999999999999999999999999999888999999999964 45556777
No 424
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.2e-30 Score=297.77 Aligned_cols=200 Identities=23% Similarity=0.289 Sum_probs=161.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC---ccceEEEEcCCCC-CCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE---PQRVAAYISQHDN-HIGE 253 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 253 (1436)
..+|+|+|++|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 45999999999999999999999999999999999999987 999999998875422 2457999999974 6778
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM 333 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 333 (1436)
.||.||+.++....+.. ++ +....++.+++.+||.+..++ .
T Consensus 97 ~tv~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~-----~ 137 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP----------RE------------------------EMIKRVDEALLAVNMLDFKTR-----E 137 (277)
T ss_pred CCHHHHHHhhHHHcCCC----------HH------------------------HHHHHHHHHHHHCCCHhHhhC-----C
Confidence 89999998754321110 00 011235678889999765554 4
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++..+ ++|+.++|..+++. .+|+|++|++
T Consensus 138 ~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tiil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 138 PARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQ-LTVLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHH-hCCEEEEEEC
Confidence 567999999999998776 4999999999999999999999998865334 45555778888876 6999999999
Q ss_pred CeEEEecChHHHH
Q 038815 409 GLIVYLGPRELVL 421 (1436)
Q Consensus 409 G~iv~~G~~~~~~ 421 (1436)
|+++..|+.+++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 425
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.8e-30 Score=294.38 Aligned_cols=204 Identities=20% Similarity=0.241 Sum_probs=158.8
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~---~~~G~i~i~g 942 (1436)
.+.++|+++.+. ++.+|+|+|+.|++|++++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 366788876542 246999999999999999999999999999999999976531 2369999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVS 1017 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1017 (1436)
.+... ...++.++|++|+..+++. |++||+.+....+.. ...+...+.++++++.+++.+..+..... .+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLHK-SGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhhC-Ccc
Confidence 76532 2346789999999988875 999999887543311 11222345577788888875421111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++-+..|+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~ 215 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDW 215 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCE
Confidence 899999999999999999999999999999999999999999999984 5899999999975 34455676
No 426
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.6e-30 Score=295.04 Aligned_cols=204 Identities=25% Similarity=0.269 Sum_probs=160.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~---~~~G~i~i~g 942 (1436)
.+.++|+++.++ ++.+|+|+|+.++|||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 477888887653 346999999999999999999999999999999999964321 2479999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVS 1017 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1017 (1436)
.+... ...++.++|++|+..+++. ||+||+.|....+.. ....+.++.++++++.+++.+........ .+.
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 148 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHD-SAL 148 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhc-Chh
Confidence 87532 2345679999999988874 999999987554321 12233345678889988885321111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++||++|+.+|++++|||||+|||..+...+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 149 ~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~ 217 (253)
T PRK14261 149 SLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDY 217 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCE
Confidence 8999999999999999999999999999999999999999999999876 689999999975 35566777
No 427
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=3.1e-31 Score=285.69 Aligned_cols=190 Identities=28% Similarity=0.408 Sum_probs=163.9
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC-------ccceEEEEcCCCCCCCCCC
Q 038815 183 DVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE-------PQRVAAYISQHDNHIGEMT 255 (1436)
Q Consensus 183 ~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 255 (1436)
++++..+.-.+|+|-|+||||||||+|+|+|+..|+ +|.|.+||..+.... .+|.+|||+|+..+||.+|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 677777665899999999999999999999999998 999999998763322 2578999999999999999
Q ss_pred HHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccC
Q 038815 256 VRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIR 335 (1436)
Q Consensus 256 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~r 335 (1436)
|+.||.|+...- .....|.+...||++|..+ +++.
T Consensus 93 VrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~-----R~P~ 127 (352)
T COG4148 93 VRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLD-----RYPG 127 (352)
T ss_pred Eecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHh-----hCCC
Confidence 999999974211 0112467889999998776 5677
Q ss_pred CCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 038815 336 GISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGL 410 (1436)
Q Consensus 336 gLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G~ 410 (1436)
.|||||||||+||||+. |+||||.+.||-....+++-.|..+.++. +.-|+.++|...|+.+++|+|++|++|+
T Consensus 128 ~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~-~IPIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 128 TLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEI-NIPILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred ccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhc-CCCEEEEecCHHHHHhhhheEEEecCCe
Confidence 89999999999999885 99999999999999999999999998764 4566778999999999999999999999
Q ss_pred EEEecChHHHH
Q 038815 411 IVYLGPRELVL 421 (1436)
Q Consensus 411 iv~~G~~~~~~ 421 (1436)
+...|+.+++.
T Consensus 207 V~A~g~~e~v~ 217 (352)
T COG4148 207 VKASGPLEEVW 217 (352)
T ss_pred EEecCcHHHHh
Confidence 99999999875
No 428
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.1e-30 Score=296.46 Aligned_cols=212 Identities=20% Similarity=0.262 Sum_probs=165.3
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCC-----CccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----EPQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~ 242 (1436)
..+.++++..+|+|+|+.++|||+++|+||||||||||+++|+|.++|. ...+|+|+++|+++... ..++.++
T Consensus 13 ~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~ 92 (261)
T PRK14263 13 LDKIFYGNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIG 92 (261)
T ss_pred eEEEEeCCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceE
Confidence 3344555678999999999999999999999999999999999999761 11389999999987432 1245689
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++..+ .+||+||+.++....+.. .+....++.+++.+||.
T Consensus 93 ~v~q~~~~~-~~tv~enl~~~~~~~~~~-----------------------------------~~~~~~~~~~l~~~~l~ 136 (261)
T PRK14263 93 MVFQQPNPF-SMSIFDNVAFGLRLNRYK-----------------------------------GDLGDRVKHALQGAALW 136 (261)
T ss_pred EEecCCccc-cccHHHHHHHHHhhcCch-----------------------------------HHHHHHHHHHHHHcCCc
Confidence 999998777 599999999865332100 00112345677888886
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
+..+... +..++.||||||||++||+++ +++|||||+|||+.++.++.+.|+++. .+ ++++.++|+..++.
T Consensus 137 ~~i~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~--~~-~tii~isH~~~~i~ 212 (261)
T PRK14263 137 DEVKDKL-KVSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK--KD-YTIALVTHNMQQAI 212 (261)
T ss_pred hhhhhhh-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHH
Confidence 4332222 245678999999999998776 599999999999999999999999874 24 55666788888999
Q ss_pred hhcCeEEEec--------CCeEEEecChHHHH
Q 038815 398 DLFDDIILLS--------DGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~--------~G~iv~~G~~~~~~ 421 (1436)
+++|+|++|+ +|++++.|+.+++.
T Consensus 213 ~~~d~v~~l~~~~~~~~~~G~i~~~g~~~~~~ 244 (261)
T PRK14263 213 RVADTTAFFSVDISQGTRTGYLVEMGPTAQIF 244 (261)
T ss_pred HhCCEEEEEecccccccCCceEEEeCCHHHHH
Confidence 9999999995 89999999988763
No 429
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.8e-30 Score=303.52 Aligned_cols=206 Identities=19% Similarity=0.242 Sum_probs=164.9
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEEc
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSITIS 941 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~---~~~~G~i~i~ 941 (1436)
..+.++|+++.+.. +.+.+|+|+|+.|++||++||+|||||||||||++|+|.... .+.+|+|.++
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 36889999887641 124699999999999999999999999999999999997531 2357999999
Q ss_pred Ceeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCC-HHHHHHHHHHHHHHcCCCcccccccCCCC
Q 038815 942 GYLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVD-SETRKMFIEEIMELVELNPLRQSLVGLPG 1015 (1436)
Q Consensus 942 g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~-~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1015 (1436)
|.+... ...++.++||+|++.+++ .|++||+.|..... ..+ .+...+.++++++.++|.+-.++.++..
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~- 222 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDKA- 222 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-
Confidence 987642 235678999999988875 79999999864322 122 2223445778899998864333444443
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
..+||||||||++|||||+.+|+||+|||||+|||+.+...+.++|+++++ ++|||+++|++. .+.+..|+
T Consensus 223 ~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Dr 293 (329)
T PRK14257 223 GNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDE 293 (329)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCE
Confidence 468999999999999999999999999999999999999999999999876 799999999974 35566787
No 430
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.7e-30 Score=324.81 Aligned_cols=202 Identities=28% Similarity=0.335 Sum_probs=166.3
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.++ ++.+|+|+|+.+++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 367788877653 3469999999999999999999999999999999999865 3579999999765
Q ss_pred cc----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 946 KQ----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 946 ~~----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
.. ..+++.+||++|+..+++.+||+||+.+....+.....+..+..+.++++++.++|.+..+.. +..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCH
Confidence 32 124567999999998899999999998853211111122334456788999999998766655 357999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||+||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++.+..|+
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~ 209 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDA 209 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999999888999999999975 45566777
No 431
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=99.97 E-value=2.2e-30 Score=289.87 Aligned_cols=180 Identities=27% Similarity=0.336 Sum_probs=147.1
Q ss_pred cCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccccccceEEEeccCCCCCCCCC
Q 038815 889 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQETFTRISGYCEQNDIHSPLVT 968 (1436)
Q Consensus 889 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lT 968 (1436)
++.+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+|
T Consensus 32 ~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~t 100 (224)
T cd03220 32 VGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELT 100 (224)
T ss_pred cCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCc
Confidence 345789999999999999999999999999999999999765 457999999975321 111233456789
Q ss_pred HHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCC
Q 038815 969 VYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1048 (1436)
Q Consensus 969 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsg 1048 (1436)
|+||+.+....+. .+.++..+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|
T Consensus 101 v~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~g 172 (224)
T cd03220 101 GRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAV 172 (224)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999987654321 223344556788999999988777764 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1049 LDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1049 LD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||+.++..+.+.|++++++|+|||+++|++. ++-+..|+
T Consensus 173 LD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 211 (224)
T cd03220 173 GDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDR 211 (224)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999998777899999999974 34444555
No 432
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.1e-30 Score=304.28 Aligned_cols=211 Identities=16% Similarity=0.181 Sum_probs=162.9
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC--CeeEEEEEEcCe
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGSITISGY 943 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~--~~~~G~i~i~g~ 943 (1436)
-+.++|++..+... .+...+|+|||+.|++||++||+|+||||||||+++|+|.... ...+|+|.++|.
T Consensus 3 ~L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~ 73 (330)
T PRK15093 3 LLDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDI 73 (330)
T ss_pred eEEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCE
Confidence 36778887766421 1235799999999999999999999999999999999997642 245799999998
Q ss_pred eccc---cc----ccceEEEeccCCC--CCCCCCHHHHHHHhhhhcCCCC---CCHHHHHHHHHHHHHHcCCCccccccc
Q 038815 944 LKKQ---ET----FTRISGYCEQNDI--HSPLVTVYESLLYSAWLRLPPE---VDSETRKMFIEEIMELVELNPLRQSLV 1011 (1436)
Q Consensus 944 ~~~~---~~----~~~~~gyv~Q~d~--~~~~lTv~E~l~f~a~lr~~~~---~~~~~~~~~v~~~l~~l~L~~~~~~~v 1011 (1436)
+... .. .++.++||+|+.. +.|.+||.+++.+......... ....+..+.+.++++.+||.+..+..
T Consensus 74 ~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~- 152 (330)
T PRK15093 74 DLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAM- 152 (330)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHH-
Confidence 6532 11 1346999999975 6788999999975422111000 11223456788999999997533211
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1012 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1012 g~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
...+..|||||||||+||++|+.+|+||++||||+|||+.++..+++.|+++.++ |.|||+++|+.+ .+.+..|+
T Consensus 153 -~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dr 228 (330)
T PRK15093 153 -RSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADK 228 (330)
T ss_pred -hCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 1124689999999999999999999999999999999999999999999999874 999999999974 45566777
No 433
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.4e-30 Score=294.08 Aligned_cols=214 Identities=22% Similarity=0.283 Sum_probs=163.2
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCC-----CccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----EPQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~ 242 (1436)
++..+.+++.+|+|+|+++++||+++|+||||||||||+++|+|..++. ...+|+|.++|+++... ..++.++
T Consensus 11 ~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 90 (253)
T PRK14261 11 NLNLWYGEKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIG 90 (253)
T ss_pred eeEEEECCeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEE
Confidence 3444445567999999999999999999999999999999999987531 11389999999987542 1245689
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++.+++. ||+||+.|+.+..+... . .+.+..++.+++.++|.
T Consensus 91 ~~~q~~~~~~~-tv~eni~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~ 136 (253)
T PRK14261 91 MVFQRPNPFPK-SIYENVAYGPRIHGEKN---------K------------------------KTLDTIVEKSLKGAALW 136 (253)
T ss_pred EEecCCccCcc-cHHHHHHhhHHhcCCCC---------H------------------------HHHHHHHHHHHHHhcCc
Confidence 99999988875 99999998654321100 0 00112244567777774
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
+...+. -+..++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ + .+++.++|+.+++.
T Consensus 137 ~~l~~~-~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~ 212 (253)
T PRK14261 137 DEVKDR-LHDSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAA 212 (253)
T ss_pred hhhHHH-hhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHH
Confidence 321111 1345668999999999998766 5999999999999999999999998753 3 45555788888899
Q ss_pred hhcCeEEEecCCeEEEecChHHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+.+|++++|++|+++..|+.+++.
T Consensus 213 ~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 213 RVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred hhCCEEEEEECCEEEEcCCHHHHH
Confidence 999999999999999999987763
No 434
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.9e-30 Score=293.51 Aligned_cols=204 Identities=24% Similarity=0.318 Sum_probs=158.6
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCC--CC-eeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~--~~-~~~G~i~i~g 942 (1436)
.+.++|+++.+. .+.+|+|+|+++++||++||+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 367888877653 2469999999999999999999999999999999999643 11 2479999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVS 1017 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1017 (1436)
.+... ...++.+||++|+..+++ .||+||+.+....+.. ...+...+.+.+.++.+++......... ..+.
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~ 147 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLH-ESAL 147 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHh-cCcc
Confidence 86531 234567999999988887 6999999886543321 1122223456778888877421111111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. ++.+..|+
T Consensus 148 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~ 216 (252)
T PRK14255 148 SLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDK 216 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCE
Confidence 8999999999999999999999999999999999999999999999866 589999999975 46667777
No 435
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=99.97 E-value=3.1e-30 Score=294.38 Aligned_cols=198 Identities=21% Similarity=0.266 Sum_probs=158.8
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC--eeEEEEEEcCe
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGSITISGY 943 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~--~~~G~i~i~g~ 943 (1436)
.++++|+++.++ +.+|+|+|+.+++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~ 69 (254)
T PRK10418 4 QIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGK 69 (254)
T ss_pred EEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCe
Confidence 578888887541 35899999999999999999999999999999999986531 15799999998
Q ss_pred ecccccc-cceEEEeccCCC--CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc---ccccccCCCCCC
Q 038815 944 LKKQETF-TRISGYCEQNDI--HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP---LRQSLVGLPGVS 1017 (1436)
Q Consensus 944 ~~~~~~~-~~~~gyv~Q~d~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~vg~~~~~ 1017 (1436)
+...... ++.++||+|++. +.+..|+.+++.+.+.... ... ..+.++++++.++|.+ ..+.. +.
T Consensus 70 ~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~~ 139 (254)
T PRK10418 70 PVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----PF 139 (254)
T ss_pred eccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----Cc
Confidence 7643222 357999999974 4566799999876443221 111 2256789999999976 23443 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.|||||||||+||++|+.+|++|+|||||+|||..+...+.+.|++++++ |+|||+++|++.. +.+..|+
T Consensus 140 ~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~-~~~~~d~ 210 (254)
T PRK10418 140 EMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGV-VARLADD 210 (254)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHH-HHHhCCE
Confidence 79999999999999999999999999999999999999999999998764 8999999999753 5555676
No 436
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.3e-30 Score=298.37 Aligned_cols=198 Identities=24% Similarity=0.285 Sum_probs=160.6
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~---~~~~G~i~i~g 942 (1436)
.++++|+++.+. ++.+|+|+|+.|++||+++|+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 478888887653 24699999999999999999999999999999999997542 13579999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 1013 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1013 (1436)
.+... ...++.++|++|+..+++. ||+||+.+....+. ... ...+.++++++.++|.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 76521 2346789999999887775 99999987654332 122 23456889999999853 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1014 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1014 ~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..|||||||||+||++|+.+|+||+|||||+|||..+...+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dr 248 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDK 248 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCE
Confidence 468999999999999999999999999999999999999999999999976 489999999975 45556776
No 437
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4e-30 Score=294.64 Aligned_cols=216 Identities=24% Similarity=0.285 Sum_probs=166.2
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCC-----CccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----EPQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~ 242 (1436)
++..++....+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +..+|+|.++|+++... ..++.++
T Consensus 12 nl~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~ 91 (261)
T PRK14258 12 NLSFYYDTQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVS 91 (261)
T ss_pred eEEEEeCCeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEE
Confidence 3444444457999999999999999999999999999999999998873 23489999999886321 1245699
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++.+++ +||+||+.+.....+... . .+....+..+++.+|+.
T Consensus 92 ~~~q~~~l~~-~tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~ 137 (261)
T PRK14258 92 MVHPKPNLFP-MSVYDNVAYGVKIVGWRP---------K------------------------LEIDDIVESALKDADLW 137 (261)
T ss_pred EEecCCccCc-ccHHHHHHHHHHhcCCCc---------H------------------------HHHHHHHHHHHHHcCCc
Confidence 9999988887 899999987643211100 0 00112345678888875
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
+..+. .-++.+..|||||||||+||+++ +++|||||+|||..+...+.+.|++++...+ ++|+.++|+..++.
T Consensus 138 ~~~~~-~~~~~~~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~-~tiiivsH~~~~i~ 215 (261)
T PRK14258 138 DEIKH-KIHKSALDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSE-LTMVIVSHNLHQVS 215 (261)
T ss_pred chhhh-HhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCC-CEEEEEECCHHHHH
Confidence 42211 12345668999999999998766 5999999999999999999999998765334 45555788889999
Q ss_pred hhcCeEEEecC-----CeEEEecChHHHH
Q 038815 398 DLFDDIILLSD-----GLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~~-----G~iv~~G~~~~~~ 421 (1436)
+++|+|++|++ |+++++|+++++.
T Consensus 216 ~~~d~i~~l~~~~~~~G~i~~~~~~~~~~ 244 (261)
T PRK14258 216 RLSDFTAFFKGNENRIGQLVEFGLTKKIF 244 (261)
T ss_pred HhcCEEEEEccCCCcCceEEEeCCHHHHH
Confidence 99999999999 9999999998874
No 438
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=99.97 E-value=2.3e-30 Score=323.87 Aligned_cols=203 Identities=23% Similarity=0.328 Sum_probs=164.3
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++++|+++.+. ++.+|+|||+.+++||++||+|||||||||||++|+|..++++.+|+|.++|.+..
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 45677776542 35699999999999999999999999999999999998653224899999998654
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCC-CCCHHHHHHHHHHHHHHcCCCccc-ccccCCCCCCCCC
Q 038815 947 QE----TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPP-EVDSETRKMFIEEIMELVELNPLR-QSLVGLPGVSGLS 1020 (1436)
Q Consensus 947 ~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~lS 1020 (1436)
.. ..++.+|||+|++.+++.+||+|++.+....+... ....++..+.++++++.++|.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 21 12356999999998889999999998764332111 122333456788999999998654 343 35799
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++|.|||+++|++. ++-+..|+
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~ 210 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDT 210 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999999888999999999975 45566787
No 439
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.1e-30 Score=298.89 Aligned_cols=215 Identities=20% Similarity=0.317 Sum_probs=162.3
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEEcCccCCCC-----CccceE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF-----EPQRVA 241 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~ 241 (1436)
+++..++....+|+|+|++|++||+++|+|||||||||||++|+|..+ |....+|+|.++|.++... ..++.+
T Consensus 43 ~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~~~~~~~i 122 (286)
T PRK14275 43 KNFSIYYGEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDEVLLRKKI 122 (286)
T ss_pred eeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccchHHhhhcE
Confidence 344444445679999999999999999999999999999999999854 3001299999999886432 124579
Q ss_pred EEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCC
Q 038815 242 AYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGL 321 (1436)
Q Consensus 242 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL 321 (1436)
+|++|++.+++. ||+||+.++....+... . ......++.+++.+|+
T Consensus 123 ~~v~q~~~l~~~-tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l 168 (286)
T PRK14275 123 GMVFQKPNPFPK-SIFDNIAYGPRLHGIND---------K------------------------KQLEEIVEKSLRKAAL 168 (286)
T ss_pred EEECCCCCCCcc-CHHHHHHhHHHhcCCCc---------H------------------------HHHHHHHHHHHHHhCC
Confidence 999999988875 99999998643321100 0 0011224456777777
Q ss_pred cccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 038815 322 DICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPET 396 (1436)
Q Consensus 322 ~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~ 396 (1436)
...... .-+..+..|||||||||+||+++ +++|||||+|||+.+...+.+.|+++.. + ++|+.++|+.+++
T Consensus 169 ~~~l~~-~~~~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tvIivsH~~~~~ 244 (286)
T PRK14275 169 WDEVSD-RLDKNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG--S-YTIMIVTHNMQQA 244 (286)
T ss_pred ccchhh-HhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHH
Confidence 421000 11344568999999999998776 4999999999999999999999998753 3 4566688888999
Q ss_pred HhhcCeEEEecCCeEEEecChHHHH
Q 038815 397 YDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 397 ~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
.+++|++++|++|++++.|+.+++.
T Consensus 245 ~~~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 245 SRVSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred HHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999988763
No 440
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.2e-30 Score=294.00 Aligned_cols=201 Identities=25% Similarity=0.310 Sum_probs=160.2
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC--C-eeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~--~-~~~G~i~i~g 942 (1436)
.+.++|+++.+. .+.+|+|+|+.|++||++||+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 467888887653 24699999999999999999999999999999999997641 1 2589999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 1013 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1013 (1436)
.+... ...++.++|++|++.+++ .||+||+.+....+. ....+...+.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 86531 234567999999988776 799999987643321 1122233456788899999853 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhh
Q 038815 1014 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1014 ~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
+..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ +.|||+++|++. ++.+..|+.
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i 216 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQT 216 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEE
Confidence 468999999999999999999999999999999999999999999999854 799999999975 466667773
No 441
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.2e-30 Score=294.01 Aligned_cols=214 Identities=21% Similarity=0.321 Sum_probs=163.0
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEEcCccCCCC-----CccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF-----EPQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~ 242 (1436)
++..+++.+++|+|+|++|++||+++|+|||||||||||++|+|.++ |....+|+|.++|.++... ..++.++
T Consensus 9 ~l~~~~~~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~ 88 (251)
T PRK14251 9 DVHLSYGNYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVG 88 (251)
T ss_pred eeEEEECCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEE
Confidence 34444455679999999999999999999999999999999999986 2112389999999886431 1245699
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++.+++ .||+||+.++....+... . ......++.+++.+||.
T Consensus 89 ~~~q~~~~~~-~tv~enl~~~~~~~~~~~----------~-----------------------~~~~~~~~~~l~~~~l~ 134 (251)
T PRK14251 89 MVFQQPTPFP-FSVYDNVAYGLKIAGVKD----------K-----------------------ELIDQRVEESLKQAAIW 134 (251)
T ss_pred EEecCCccCC-CcHHHHHHHHHHHcCCCC----------H-----------------------HHHHHHHHHHHHHcCCC
Confidence 9999987776 799999987643221100 0 00112245677888884
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
..... .-+..++.||||||||++||+++ +++|||||+|||+.+...+.+.|+++.+ + ++|+.++|..+++.
T Consensus 135 ~~~~~-~~~~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiiiisH~~~~~~ 210 (251)
T PRK14251 135 KETKD-NLDRNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH--Q-YTFIMVTHNLQQAG 210 (251)
T ss_pred cchHH-HhccChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc--C-CeEEEEECCHHHHH
Confidence 32100 11345668999999999998766 5999999999999999999999998743 4 55666788888999
Q ss_pred hhcCeEEEecCCeEEEecChHHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+++|+|++|++|+++..|+.+++.
T Consensus 211 ~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 211 RISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred hhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999987763
No 442
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.6e-30 Score=296.20 Aligned_cols=215 Identities=20% Similarity=0.265 Sum_probs=161.4
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEEcCccCCCC-----CccceE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF-----EPQRVA 241 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~ 241 (1436)
+++..++++..+|+|+|++|++||+++|+|||||||||||++|+|..+ +....+|+|.++|.++... ..++.+
T Consensus 25 ~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i 104 (268)
T PRK14248 25 KDLSIYYGEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREI 104 (268)
T ss_pred EEEEEEeCCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccE
Confidence 344444455679999999999999999999999999999999999864 1111389999999987532 123569
Q ss_pred EEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCC
Q 038815 242 AYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGL 321 (1436)
Q Consensus 242 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL 321 (1436)
+|++|++.+++. ||+||+.++....+... .. ..+..+...++.+|+
T Consensus 105 ~~v~q~~~~~~~-tv~enl~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l 150 (268)
T PRK14248 105 GMVFQKPNPFPK-SIYNNITHALKYAGERR---------KS------------------------VLDEIVEESLTKAAL 150 (268)
T ss_pred EEEecCCccCcc-cHHHHHHHHHHhcCCCc---------HH------------------------HHHHHHHHHHHHcCC
Confidence 999999888875 99999987643211000 00 001123446777777
Q ss_pred cccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 038815 322 DICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPET 396 (1436)
Q Consensus 322 ~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~ 396 (1436)
.+.... .-+..+..||||||||++||+++ +++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++
T Consensus 151 ~~~~~~-~~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~ 226 (268)
T PRK14248 151 WDEVKD-RLHSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQA 226 (268)
T ss_pred CcchHH-HHhcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHH
Confidence 421111 11345668999999999998776 5999999999999999999999999743 4 4556677888889
Q ss_pred HhhcCeEEEecCCeEEEecChHHHH
Q 038815 397 YDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 397 ~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
.+++|+|++|++|++++.|+.+++.
T Consensus 227 ~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 227 LRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999987763
No 443
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=99.97 E-value=4.3e-30 Score=293.35 Aligned_cols=210 Identities=24% Similarity=0.316 Sum_probs=162.5
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCcc-----CCCCCc-------
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHN-----MDEFEP------- 237 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~-----~~~~~~------- 237 (1436)
++..+++...+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.+ +.....
T Consensus 8 ~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~ 84 (253)
T TIGR02323 8 GLSKSYGGGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPD---HGTATYIMRSGAELELYQLSEAERRRLM 84 (253)
T ss_pred eeEEEeCCceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEEecccccccccccCCHHHHHHhh
Confidence 3344444567999999999999999999999999999999999999887 9999999976 443221
Q ss_pred cceEEEEcCCCC--CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHH
Q 038815 238 QRVAAYISQHDN--HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYY 315 (1436)
Q Consensus 238 ~~~~~yv~Q~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (1436)
++.++|++|++. ..+.+|+.||+.+........ . . .+....++.+
T Consensus 85 ~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~-~--------~------------------------~~~~~~~~~~ 131 (253)
T TIGR02323 85 RTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGAR-H--------Y------------------------GNIRAAAHDW 131 (253)
T ss_pred hcceEEEEeCcccccCccccHHHHHHHHHHHhccc-c--------h------------------------HHHHHHHHHH
Confidence 245899999874 456679999997532110000 0 0 0011235678
Q ss_pred HHHcCCcc-cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEE
Q 038815 316 LKVLGLDI-CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISL 389 (1436)
Q Consensus 316 l~~lgL~~-~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~ 389 (1436)
++.+|+.+ ..++ .++.|||||||||+||+++ +++|||||+|||+.++..+.+.|++..+.. +.++|.+
T Consensus 132 l~~l~l~~~~~~~-----~~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~v 205 (253)
T TIGR02323 132 LEEVEIDPTRIDD-----LPRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDL-GLAVIIV 205 (253)
T ss_pred HHHcCCChhhhhc-----CchhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 89999963 4443 4567999999999998776 499999999999999999999999876533 4455557
Q ss_pred ecChhhHHhhcCeEEEecCCeEEEecChHHHH
Q 038815 390 LQPAPETYDLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 390 ~q~~~~~~~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+|+.+++.+.+|++++|++|++++.|+.+++.
T Consensus 206 sH~~~~~~~~~d~~~~l~~G~i~~~~~~~~~~ 237 (253)
T TIGR02323 206 THDLGVARLLAQRLLVMQQGRVVESGLTDQVL 237 (253)
T ss_pred eCCHHHHHHhcCEEEEEECCEEEEECCHHHHh
Confidence 88888999999999999999999999887663
No 444
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.5e-30 Score=296.76 Aligned_cols=213 Identities=23% Similarity=0.307 Sum_probs=163.6
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCC-----CccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----EPQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~ 242 (1436)
++..+.+++++|+|+|+.|++||+++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++
T Consensus 30 nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~ 109 (272)
T PRK14236 30 NLNLFYGDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVG 109 (272)
T ss_pred EEEEEECCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEE
Confidence 4444444567999999999999999999999999999999999998741 02399999999987531 1246789
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++.+++. ||+||+.+.....+... +. ..+..++.+++.+|+.
T Consensus 110 ~v~q~~~l~~~-tv~enl~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~ 155 (272)
T PRK14236 110 MVFQRPNPFPK-SIYENVVYGLRLQGINN---------RR------------------------VLDEAVERSLRGAALW 155 (272)
T ss_pred EEecCCccCcc-cHHHHHHHHHHhcCCCc---------HH------------------------HHHHHHHHHHHHcCCC
Confidence 99999888886 99999988654321100 00 0112245567777875
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
....+.. +..++.|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++ +. +++.++|+.+++.
T Consensus 156 ~~~~~~~-~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~~-tiiivtH~~~~~~ 231 (272)
T PRK14236 156 DEVKDRL-HENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--KY-TIVIVTHNMQQAA 231 (272)
T ss_pred hhHHHHh-hCCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CC-eEEEEeCCHHHHH
Confidence 3211111 345678999999999998776 4999999999999999999999999853 44 5555778888999
Q ss_pred hhcCeEEEecCCeEEEecChHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~ 420 (1436)
+.+|+|++|++|++++.|+.+++
T Consensus 232 ~~~d~i~~l~~G~i~~~g~~~~~ 254 (272)
T PRK14236 232 RVSDYTAFMYMGKLVEYGDTDTL 254 (272)
T ss_pred hhCCEEEEEECCEEEecCCHHHH
Confidence 99999999999999999988765
No 445
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.5e-30 Score=298.50 Aligned_cols=200 Identities=21% Similarity=0.272 Sum_probs=159.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~--~-~~~~G~i~i~g 942 (1436)
.+.++|+++.+. .+.+|+|+|+.|++||+++|+|||||||||||++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 578888887653 2459999999999999999999999999999999999642 1 12579999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 1013 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1013 (1436)
.+... ...++.+||++|++.+++. ||+||+.+....+.. .+.....+.+.++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 76531 1245679999999888774 999999986543211 122233456778888888742 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1014 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1014 ~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~ 250 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDY 250 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCE
Confidence 467999999999999999999999999999999999999999999999865 689999999975 45566777
No 446
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=99.97 E-value=3.5e-30 Score=295.94 Aligned_cols=203 Identities=27% Similarity=0.342 Sum_probs=163.0
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc------cceEEEEcCCC--
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP------QRVAAYISQHD-- 248 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d-- 248 (1436)
++.+|+|+|++|++|++++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++|++|++
T Consensus 24 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~ 100 (268)
T PRK10419 24 HQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSIS 100 (268)
T ss_pred ceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhh
Confidence 367999999999999999999999999999999999999887 9999999998755432 45799999997
Q ss_pred CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc-ccccc
Q 038815 249 NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD-ICADT 327 (1436)
Q Consensus 249 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t 327 (1436)
.+++..|+.|++.+...... .... .+....++.+++.+|++ ...+
T Consensus 101 ~~~~~~t~~~~l~~~~~~~~---------~~~~------------------------~~~~~~~~~~l~~~gl~~~~~~- 146 (268)
T PRK10419 101 AVNPRKTVREIIREPLRHLL---------SLDK------------------------AERLARASEMLRAVDLDDSVLD- 146 (268)
T ss_pred ccCCCCCHHHHHHHHHHhhc---------cCCH------------------------HHHHHHHHHHHHHcCCChhHhh-
Confidence 36678999999976432100 0000 01122356788899996 3444
Q ss_pred cccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
..++.||||||||++||+++ +++|||||+|||..+...+.+.|+++.+.. +++++.++|+..++.+++|+
T Consensus 147 ----~~~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tiiivsH~~~~i~~~~d~ 221 (268)
T PRK10419 147 ----KRPPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQF-GTACLFITHDLRLVERFCQR 221 (268)
T ss_pred ----CCCccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHc-CcEEEEEECCHHHHHHhCCE
Confidence 34567999999999998776 599999999999999999999999886533 45566678888899999999
Q ss_pred EEEecCCeEEEecChHHHH
Q 038815 403 IILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 403 vilL~~G~iv~~G~~~~~~ 421 (1436)
+++|++|++++.|+.+++.
T Consensus 222 i~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 222 VMVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEEECCEEeeeCChhhcc
Confidence 9999999999999988764
No 447
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=99.97 E-value=3.4e-30 Score=294.92 Aligned_cols=200 Identities=23% Similarity=0.234 Sum_probs=158.9
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee-
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL- 944 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~- 944 (1436)
.++++|+++.++ ++.+|+|+|+.++|||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 477888887653 2469999999999999999999999999999999999865 357999999976
Q ss_pred ----ccc---cc----ccceEEEeccCCC--CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-ccccc
Q 038815 945 ----KKQ---ET----FTRISGYCEQNDI--HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-LRQSL 1010 (1436)
Q Consensus 945 ----~~~---~~----~~~~~gyv~Q~d~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 1010 (1436)
... .. .++.+||++|+.. +.+.+|+.|++.+...... .....+....++++++.+++.+ ..+..
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 322 11 2346999999973 5677899999876432111 1122234556789999999964 44544
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1011 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1011 vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+++.|++++++ |.|||+++|++. .+.+..|+
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~ 221 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHR 221 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCE
Confidence 4679999999999999999999999999999999999999999999998765 899999999975 34455666
No 448
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=99.97 E-value=3.2e-30 Score=308.64 Aligned_cols=205 Identities=32% Similarity=0.404 Sum_probs=171.3
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC-----CccceEEEEcCCC--
Q 038815 176 KHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-----EPQRVAAYISQHD-- 248 (1436)
Q Consensus 176 ~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d-- 248 (1436)
+...+++||||.+++||+++|+|+||||||||.++|+|+++|+ +|+|.++|.+.+.. ..++.+-+|+|++
T Consensus 302 ~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~---~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~ 378 (539)
T COG1123 302 GEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPS---SGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYS 378 (539)
T ss_pred cceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEEeCcccccccchhhhhhhheEEEEeCccc
Confidence 3467999999999999999999999999999999999999997 99999999872111 1134667777775
Q ss_pred CCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccc
Q 038815 249 NHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTL 328 (1436)
Q Consensus 249 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 328 (1436)
.+.|.+||+++|.......+... ..+.+..++++++..||+..
T Consensus 379 SLnPr~tV~~~i~epL~~~~~~~---------------------------------~~~~~~rv~~ll~~VgL~~~---- 421 (539)
T COG1123 379 SLNPRMTVGDILAEPLRIHGGGS---------------------------------GAERRARVAELLELVGLPPE---- 421 (539)
T ss_pred ccCccccHHHHHHhHHhhhcccc---------------------------------hHHHHHHHHHHHHHcCCCHH----
Confidence 78999999999988765443211 11223457889999999842
Q ss_pred ccCcccCCCCHHHHHHHhhhhhhh-----hheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPALA-----LFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~v-----lllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
..++++.+|||||||||+||||++ +++|||||.||++++.++++.|+++.+.. +.+.+.++|+..-+...||+|
T Consensus 422 ~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~-g~t~lfISHDl~vV~~i~drv 500 (539)
T COG1123 422 FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEEL-GLTYLFISHDLAVVRYIADRV 500 (539)
T ss_pred HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHhhCceE
Confidence 456789999999999999988774 99999999999999999999999988765 456666999999999999999
Q ss_pred EEecCCeEEEecChHHHH
Q 038815 404 ILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~~ 421 (1436)
++|++|+||+.||.+++.
T Consensus 501 ~vm~~G~iVE~G~~~~v~ 518 (539)
T COG1123 501 AVMYDGRIVEEGPTEKVF 518 (539)
T ss_pred EEEECCeEEEeCCHHHHh
Confidence 999999999999998874
No 449
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.6e-30 Score=296.21 Aligned_cols=200 Identities=22% Similarity=0.264 Sum_probs=159.8
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~--~-~~~~G~i~i~g 942 (1436)
.+.++|+++.+. ++.+|+|+|+.+++||+++|+|+||||||||+++|+|... . .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478899987653 2469999999999999999999999999999999999632 1 13579999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 1013 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1013 (1436)
.+... ..+++.+||++|+..+++. |++||+.+...... .......++.++++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 86532 1345679999999888874 99999987643221 1122233455778888888853 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1014 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1014 ~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|++. ++.+..|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~ 232 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDR 232 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCE
Confidence 467999999999999999999999999999999999999999999999865 689999999975 46677787
No 450
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=99.97 E-value=1.6e-30 Score=332.03 Aligned_cols=202 Identities=21% Similarity=0.259 Sum_probs=160.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGEM 254 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 254 (1436)
.++|+|+|++++|||.++|+|+||||||||+|+|+|+++|+ +|+|.+||.++++... ++.++||+|++.+|+.
T Consensus 354 ~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~- 429 (592)
T PRK10790 354 NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD- 429 (592)
T ss_pred CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-
Confidence 46999999999999999999999999999999999999998 9999999999877654 4789999999988876
Q ss_pred CHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCccc
Q 038815 255 TVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMI 334 (1436)
Q Consensus 255 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 334 (1436)
|++|||.++.. . +.+...++....+ .++.++. |++..||.+|+. .
T Consensus 430 Ti~~NI~~~~~---~-----------------------~d~~i~~a~~~~g------l~~~i~~--lp~Gldt~i~e~-g 474 (592)
T PRK10790 430 TFLANVTLGRD---I-----------------------SEEQVWQALETVQ------LAELARS--LPDGLYTPLGEQ-G 474 (592)
T ss_pred hHHHHHHhCCC---C-----------------------CHHHHHHHHHHcC------cHHHHHh--ccccccccccCC-C
Confidence 99999988521 0 0000111110000 1112222 556678999874 4
Q ss_pred CCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 038815 335 RGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG 409 (1436)
Q Consensus 335 rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G 409 (1436)
..||||||||++||||+ +++|||||++||+.+...+.+.|++... ++|+|+..|++ +....+|+|++|++|
T Consensus 475 ~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~tvIivtHr~--~~l~~~D~ii~l~~G 550 (592)
T PRK10790 475 NNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HTTLVVIAHRL--STIVEADTILVLHRG 550 (592)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEECC
Confidence 57999999999999877 4999999999999999999999998643 56666654443 556679999999999
Q ss_pred eEEEecChHHHHH
Q 038815 410 LIVYLGPRELVLD 422 (1436)
Q Consensus 410 ~iv~~G~~~~~~~ 422 (1436)
+++..|+++++.+
T Consensus 551 ~i~~~G~~~~L~~ 563 (592)
T PRK10790 551 QAVEQGTHQQLLA 563 (592)
T ss_pred EEEEEcCHHHHHh
Confidence 9999999998863
No 451
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.7e-30 Score=293.65 Aligned_cols=190 Identities=19% Similarity=0.238 Sum_probs=154.5
Q ss_pred ceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC--C-eeEEEEEEcCeeccc-----ccccceEEEeccCCC
Q 038815 891 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGSITISGYLKKQ-----ETFTRISGYCEQNDI 962 (1436)
Q Consensus 891 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 962 (1436)
++.+|+|+|+.++|||++||+|+||||||||+++|+|...+ + +.+|+|.++|.+... ..+++.++|++|+..
T Consensus 20 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 99 (261)
T PRK14263 20 NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPN 99 (261)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCc
Confidence 45799999999999999999999999999999999997642 1 258999999986532 234567999999987
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 038815 963 HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1042 (1436)
Q Consensus 963 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~l 1042 (1436)
++ .+|++||+.+....+. . ..+..+.++++++.++|.+..+...+. ..+.||||||||++|||+|+.+|++|+|
T Consensus 100 ~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~~~LS~G~~qrv~laral~~~p~llll 173 (261)
T PRK14263 100 PF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLKV-SGLSLSGGQQQRLCIARAIATEPEVLLL 173 (261)
T ss_pred cc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhhC-CcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 77 5999999988754432 1 122345688899999986533222222 2468999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1043 DEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1043 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||+|||+.+...+.+.|+++.+ ++|||+++|++. ++-+..|+
T Consensus 174 DEPtsgLD~~~~~~l~~~l~~~~~-~~tii~isH~~~-~i~~~~d~ 217 (261)
T PRK14263 174 DEPCSALDPIATRRVEELMVELKK-DYTIALVTHNMQ-QAIRVADT 217 (261)
T ss_pred eCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999854 799999999976 46677787
No 452
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=99.97 E-value=3.6e-30 Score=292.60 Aligned_cols=195 Identities=27% Similarity=0.369 Sum_probs=158.7
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCCCCH
Q 038815 180 ILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGEMTV 256 (1436)
Q Consensus 180 iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV 256 (1436)
+|+|||+++++|++++|+||||||||||+++|+|.++ . +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 8999999999999999999999999999999999874 3 8999999998765432 2458999999888889999
Q ss_pred HHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccCC
Q 038815 257 RETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIRG 336 (1436)
Q Consensus 257 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~rg 336 (1436)
+||+.+..... . ... +....++.+++.+||++..++ .++.
T Consensus 87 ~~nl~~~~~~~-~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~-----~~~~ 126 (248)
T PRK03695 87 FQYLTLHQPDK-T----------RTE------------------------AVASALNEVAEALGLDDKLGR-----SVNQ 126 (248)
T ss_pred HHHHHhcCccC-C----------CcH------------------------HHHHHHHHHHHHcCCHhHhcC-----Cccc
Confidence 99998752110 0 000 011235678899999866554 4557
Q ss_pred CCHHHHHHHhhhhh------------hhhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 038815 337 ISGGQKRRVTTGPA------------LALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDII 404 (1436)
Q Consensus 337 LSGGqrkRvsia~a------------~vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vi 404 (1436)
|||||||||+||++ .+++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+++|+++
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQ-Q-GIAVVMSSHDLNHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 99999999999433 57999999999999999999999998764 3 4556667888889999999999
Q ss_pred EecCCeEEEecChHHH
Q 038815 405 LLSDGLIVYLGPRELV 420 (1436)
Q Consensus 405 lL~~G~iv~~G~~~~~ 420 (1436)
+|++|++++.|+.+++
T Consensus 205 ~l~~G~i~~~g~~~~~ 220 (248)
T PRK03695 205 LLKQGKLLASGRRDEV 220 (248)
T ss_pred EEECCEEEEECCHHHH
Confidence 9999999999988765
No 453
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.7e-30 Score=280.36 Aligned_cols=152 Identities=33% Similarity=0.419 Sum_probs=134.2
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc-----ccccceEEEeccCCCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ-----ETFTRISGYCEQNDIHSPL 966 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~~~~ 966 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++..++.
T Consensus 13 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (178)
T cd03229 13 KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALFPH 90 (178)
T ss_pred eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccchhHHHHhhcEEEEecCCccCCC
Confidence 469999999999999999999999999999999999765 357999999976532 2356789999999888888
Q ss_pred CCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCC
Q 038815 967 VTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1046 (1436)
Q Consensus 967 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPT 1046 (1436)
.|++|++.+. ||||||||++||++|+.+|++++|||||
T Consensus 91 ~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~~p~llilDEP~ 128 (178)
T cd03229 91 LTVLENIALG------------------------------------------LSGGQQQRVALARALAMDPDVLLLDEPT 128 (178)
T ss_pred CCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 9999998542 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1047 SGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1047 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+|||..++..+.+.|++++++ |+|+|+++|++. ++.+..|+
T Consensus 129 ~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 170 (178)
T cd03229 129 SALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADR 170 (178)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 999999999999999999887 899999999974 34445665
No 454
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.1e-30 Score=327.90 Aligned_cols=202 Identities=26% Similarity=0.334 Sum_probs=166.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC------ccceEEEEcCCC--C
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE------PQRVAAYISQHD--N 249 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~ 249 (1436)
+.+|+|||+.|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++ .
T Consensus 337 ~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~ 413 (623)
T PRK10261 337 VHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQ---GGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYAS 413 (623)
T ss_pred eEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhh
Confidence 56999999999999999999999999999999999999887 999999999875432 135699999996 5
Q ss_pred CCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc-cccccc
Q 038815 250 HIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD-ICADTL 328 (1436)
Q Consensus 250 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~ 328 (1436)
+++.+||.|++.+.....+... + .+....++++|+.+||+ ...+
T Consensus 414 l~~~~tv~~~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~L~~~gL~~~~~~-- 458 (623)
T PRK10261 414 LDPRQTVGDSIMEPLRVHGLLP---------G------------------------KAAAARVAWLLERVGLLPEHAW-- 458 (623)
T ss_pred cCCCCCHHHHHHHHHHHcCCCC---------H------------------------HHHHHHHHHHHHHcCCCHHHhh--
Confidence 8899999999987654321100 0 01122356789999996 3444
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
..+..|||||||||+||+++ +|+|||||+|||..++.++.+.|+++.+.. +.+||.++|+..++.+++|+|
T Consensus 459 ---~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~-g~tvi~isHdl~~v~~~~dri 534 (623)
T PRK10261 459 ---RYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDF-GIAYLFISHDMAVVERISHRV 534 (623)
T ss_pred ---CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEE
Confidence 44567999999999998877 499999999999999999999999987643 455666889999999999999
Q ss_pred EEecCCeEEEecChHHHH
Q 038815 404 ILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~~ 421 (1436)
++|++|++++.|+++++.
T Consensus 535 ~vl~~G~iv~~g~~~~i~ 552 (623)
T PRK10261 535 AVMYLGQIVEIGPRRAVF 552 (623)
T ss_pred EEEECCEEEEecCHHHHh
Confidence 999999999999998874
No 455
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.7e-30 Score=294.67 Aligned_cols=214 Identities=22% Similarity=0.270 Sum_probs=163.3
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEEcCccCCCC-----CccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSL--KVSGRVTYNGHNMDEF-----EPQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~ 242 (1436)
++..++++.++|+|+|+++++||+++|+|+||||||||||+|+|.++++. ..+|+|.++|.++... ..++.++
T Consensus 12 ~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~ 91 (259)
T PRK14260 12 DLSFYYNTSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIG 91 (259)
T ss_pred EEEEEECCeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheE
Confidence 34444445679999999999999999999999999999999999987531 1389999999887431 1235699
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++.+++ +||+||+.++....+... + .+....++.+++.+|+.
T Consensus 92 ~v~q~~~l~~-~tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~ 137 (259)
T PRK14260 92 MVFQRPNPFP-MSIYENVAYGVRISAKLP---------Q------------------------ADLDEIVESALKGAALW 137 (259)
T ss_pred EEecccccCC-ccHHHHHHHHHHHhcCCC---------H------------------------HHHHHHHHHHHHHcCCc
Confidence 9999998887 899999988643221000 0 00112345567777774
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
..... .-+..++.|||||||||+||+++ +++|||||+|||+.+...+.+.|+++.. + .+|+.++|+.+++.
T Consensus 138 ~~l~~-~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~i~ 213 (259)
T PRK14260 138 QEVKD-KLNKSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS--E-LTIAIVTHNMQQAT 213 (259)
T ss_pred chhhh-HhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHH
Confidence 21110 11345668999999999998776 4999999999999999999999998743 3 45666788899999
Q ss_pred hhcCeEEEec-----CCeEEEecChHHHH
Q 038815 398 DLFDDIILLS-----DGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~-----~G~iv~~G~~~~~~ 421 (1436)
+++|++++|+ +|+++++|+++++.
T Consensus 214 ~~~d~i~~l~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 214 RVSDFTAFFSTDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred HhcCeEEEEeccCCCCceEEEeCCHHHHh
Confidence 9999999998 59999999998763
No 456
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=99.97 E-value=1.2e-30 Score=291.60 Aligned_cols=196 Identities=27% Similarity=0.389 Sum_probs=155.6
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
++++|+++.+.. .++.+|+|+|+.+++|++++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhH
Confidence 566777665421 12469999999999999999999999999999999999865 35799999997653
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccC------CCCCC
Q 038815 947 Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVG------LPGVS 1017 (1436)
Q Consensus 947 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg------~~~~~ 1017 (1436)
. ...++.++|++|+...++ .||.|++.+... . .. .+.++++++.+++.+..+.... ...+.
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~----~-~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP----L-AD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC----C-CC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 224567999999988776 699999976421 1 11 2235678888888776665431 11245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++||++|+.+|++|+|||||+|||+.+...+++.|++++++ +|||+++|++.. + +..|+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~-~-~~~d~ 207 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPSL-L-DLVDR 207 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHHH-H-HhCCE
Confidence 89999999999999999999999999999999999999999999998764 899999999863 3 67776
No 457
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=7.1e-30 Score=291.47 Aligned_cols=215 Identities=24% Similarity=0.362 Sum_probs=164.0
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC---CCcccEEEEcCccCCCCC---ccceEEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS---LKVSGRVTYNGHNMDEFE---PQRVAAY 243 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~---~~~~G~I~~~G~~~~~~~---~~~~~~y 243 (1436)
++.++.+++.+|+|+|+.+++||+++|+|||||||||||++|+|..+|+ +.+.|+|.++|+++.... .++.++|
T Consensus 15 ~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~~~~~i~~ 94 (257)
T PRK14246 15 RLYLYINDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIKLRKEVGM 94 (257)
T ss_pred eEEEecCCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHHHhcceEE
Confidence 4445556678999999999999999999999999999999999999876 122356666666654332 2467899
Q ss_pred EcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc
Q 038815 244 ISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI 323 (1436)
Q Consensus 244 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 323 (1436)
++|++.+++.+||+||+.++....+... + .+....++++++.+|+.+
T Consensus 95 ~~q~~~~~~~~tv~~nl~~~~~~~~~~~---------~------------------------~~~~~~~~~~~~~~~l~~ 141 (257)
T PRK14246 95 VFQQPNPFPHLSIYDNIAYPLKSHGIKE---------K------------------------REIKKIVEECLRKVGLWK 141 (257)
T ss_pred EccCCccCCCCcHHHHHHHHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCCc
Confidence 9999999999999999998643211100 0 011123566788889863
Q ss_pred cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 038815 324 CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 398 (1436)
Q Consensus 324 ~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 398 (1436)
...... +..++.||||||||++||+++ +++|||||+|||..+...+.+.|+++.+ + ++|+.++|...++.+
T Consensus 142 ~~~~~~-~~~~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiilvsh~~~~~~~ 217 (257)
T PRK14246 142 EVYDRL-NSPASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN--E-IAIVIVSHNPQQVAR 217 (257)
T ss_pred cchhhh-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-cEEEEEECCHHHHHH
Confidence 211111 234567999999999998766 5999999999999999999999998743 3 455667788888889
Q ss_pred hcCeEEEecCCeEEEecChHHHH
Q 038815 399 LFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 399 lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
++|++++|++|+++.+|+.+++.
T Consensus 218 ~~d~v~~l~~g~i~~~g~~~~~~ 240 (257)
T PRK14246 218 VADYVAFLYNGELVEWGSSNEIF 240 (257)
T ss_pred hCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999988764
No 458
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=99.97 E-value=3.7e-30 Score=284.64 Aligned_cols=187 Identities=25% Similarity=0.311 Sum_probs=148.4
Q ss_pred cccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCC-------ccceEEEEcCC
Q 038815 175 KKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFE-------PQRVAAYISQH 247 (1436)
Q Consensus 175 ~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~ 247 (1436)
++++++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|+
T Consensus 8 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~ 84 (206)
T TIGR03608 8 FGDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFD---SGQVYLNGKETPPLNSKKASKFRREKLGYLFQN 84 (206)
T ss_pred ECCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccchhhHHHHHHhCeeEEecc
Confidence 34457999999999999999999999999999999999999887 999999999854221 23579999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccc
Q 038815 248 DNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADT 327 (1436)
Q Consensus 248 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 327 (1436)
+.+++.+||+||+.+.....+.. + .+....++.+++.+||++..+.
T Consensus 85 ~~~~~~~t~~e~~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~ 130 (206)
T TIGR03608 85 FALIENETVEENLDLGLKYKKLS----------K------------------------KEKREKKKEALEKVGLNLKLKQ 130 (206)
T ss_pred hhhccCCcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCchhhhcC
Confidence 98999999999999864322110 0 0012235678899999776655
Q ss_pred cccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 038815 328 LVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDD 402 (1436)
Q Consensus 328 ~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~ 402 (1436)
. ++.||||||||++||+++ +++|||||+|||+.+...+.+.|+++.. .+.|+|+ ++|.... .+.+|+
T Consensus 131 ~-----~~~lS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~-~sh~~~~-~~~~d~ 202 (206)
T TIGR03608 131 K-----IYELSGGEQQRVALARAILKDPPLILADEPTGSLDPKNRDEVLDLLLELND-EGKTIII-VTHDPEV-AKQADR 202 (206)
T ss_pred C-----hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHh-cCCEEEE-EeCCHHH-HhhcCE
Confidence 4 457999999999998766 5999999999999999999999998764 3455555 5666654 468999
Q ss_pred EEEe
Q 038815 403 IILL 406 (1436)
Q Consensus 403 vilL 406 (1436)
+++|
T Consensus 203 i~~l 206 (206)
T TIGR03608 203 VIEL 206 (206)
T ss_pred EEeC
Confidence 9875
No 459
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=99.97 E-value=2.8e-30 Score=323.03 Aligned_cols=195 Identities=21% Similarity=0.287 Sum_probs=164.7
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+. ++.+|+|+|+.+++|+++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 477888887653 2469999999999999999999999999999999999865 3579999999765
Q ss_pred ccc---c-ccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 946 KQE---T-FTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 946 ~~~---~-~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
... . .++.+||++|++.+++.+||+|++.+... . ..+..+.++++++.++|.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 321 1 23469999999999999999999987531 1 1233456889999999988777664 57999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++|.|||+++|++. ++.+..|+
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~ 209 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADR 209 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999999888999999999975 35667787
No 460
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=99.97 E-value=7.6e-31 Score=296.58 Aligned_cols=181 Identities=25% Similarity=0.368 Sum_probs=140.7
Q ss_pred eEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc---ccccceEEEeccCCCCCCCCC
Q 038815 892 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ---ETFTRISGYCEQNDIHSPLVT 968 (1436)
Q Consensus 892 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lT 968 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+++.+||++|+..+++ .|
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-RS 91 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-ch
Confidence 459999999999999999999999999999999999865 357999999976532 234567999999987765 69
Q ss_pred HHHHHHHhhhhcCCCCCCHHHHH-----HHHHHHHHHc--CCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 038815 969 VYESLLYSAWLRLPPEVDSETRK-----MFIEEIMELV--ELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1041 (1436)
Q Consensus 969 v~E~l~f~a~lr~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~ 1041 (1436)
|+||+.+... ........ ...+++++.+ ++....+.. +..|||||||||+||++|+.+|++|+
T Consensus 92 v~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~lll 161 (237)
T cd03252 92 IRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GAGLSGGQRQRIAIARALIHNPRILI 161 (237)
T ss_pred HHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CCcCCHHHHHHHHHHHHHhhCCCEEE
Confidence 9999976421 11111100 0112333333 333322222 46899999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1042 MDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1042 lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||+|||+.+...+.+.|+++++ |+|||+++|++.. + +..|+
T Consensus 162 lDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~~-~-~~~d~ 205 (237)
T cd03252 162 FDEATSALDYESEHAIMRNMHDICA-GRTVIIIAHRLST-V-KNADR 205 (237)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHHH-H-HhCCE
Confidence 9999999999999999999999864 8999999999864 3 45776
No 461
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=99.97 E-value=5.4e-30 Score=291.26 Aligned_cols=160 Identities=26% Similarity=0.299 Sum_probs=128.2
Q ss_pred eeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecccccccceEEEeccCCCCCCCCCHHHHHH
Q 038815 895 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQETFTRISGYCEQNDIHSPLVTVYESLL 974 (1436)
Q Consensus 895 L~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~ 974 (1436)
|+-=.|.|..||+++++||||-||||+.++|||..++ .+|. . ..-.++|-||--.-....||++-|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~-------~~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----E-------EDLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----C-------ccceEeecceeecCCCCCcHHHHHH
Confidence 4444678899999999999999999999999997653 3444 1 1124678888765556789999885
Q ss_pred HhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHH
Q 038815 975 YSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1054 (1436)
Q Consensus 975 f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~ 1054 (1436)
-...-+... .-+..++.+-|.|+++.+..+ .+|||||.|||+||.+|..+.++.+||||++.||+..+
T Consensus 424 ~~~~~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 432221111 123468888999999988874 67999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-cCCEEEEEecCCC
Q 038815 1055 AIVMRTVKNTVE-TGRTVVCTIHQPS 1079 (1436)
Q Consensus 1055 ~~i~~~l~~~~~-~g~tvi~t~Hqps 1079 (1436)
..+-++||+.+. ++.|.+++-||-.
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~ 517 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIY 517 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEeccee
Confidence 999999999886 4889999999853
No 462
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=99.97 E-value=4.8e-30 Score=294.87 Aligned_cols=208 Identities=25% Similarity=0.293 Sum_probs=162.9
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.+.... ..+. ..++.+|+|+|+.+++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~~-~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSGK-HQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---cccc-cCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 56778877653100 0000 013579999999999999999999999999999999999765 45899999998653
Q ss_pred c------ccccceEEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 038815 947 Q------ETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVS 1017 (1436)
Q Consensus 947 ~------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1017 (1436)
. ...++.++|++|+. .+.+..|++|++.+..... ...+..+....++++++.+|+. ...+.. +.
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 2 12456799999997 3567789999987643211 1123344455789999999996 455554 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++||++|+.+|++|+|||||+|||..+...+.+.|++++++ |.|||+++|++. ++-+..|+
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~ 221 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQR 221 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCE
Confidence 79999999999999999999999999999999999999999999998765 899999999975 45556677
No 463
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=99.97 E-value=1.1e-30 Score=338.80 Aligned_cols=195 Identities=30% Similarity=0.381 Sum_probs=164.2
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..++++|++|.++. +++.+|+|+|++++|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEE
Confidence 36899999998742 12469999999999999999999999999999999999876 458999999987
Q ss_pred ccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCC
Q 038815 945 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLP 1014 (1436)
Q Consensus 945 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 1014 (1436)
.++ ..+++.+|||+|++.+++ -|++||+.++. | .+. +.++++++..++.+. .|+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~~----e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LTL----DEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CCH----HHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 653 467889999999999886 59999998742 2 222 336677888877653 36777765
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhh
Q 038815 1015 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1015 ~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
| .+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|+.
T Consensus 586 G-~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~I 654 (686)
T TIGR03797 586 G-GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRI 654 (686)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEE
Confidence 4 689999999999999999999999999999999999999999999886 689999999984 46778883
No 464
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.1e-30 Score=291.86 Aligned_cols=214 Identities=20% Similarity=0.274 Sum_probs=160.7
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEEcCccCCCC-----CccceEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF-----EPQRVAA 242 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~ 242 (1436)
++..+++.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ |+...+|+|.++|.++... ..++.++
T Consensus 10 ~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 89 (252)
T PRK14255 10 DVHLFYGKFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVG 89 (252)
T ss_pred eEEEEECCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEE
Confidence 34444455679999999999999999999999999999999999865 3212389999999887421 1235799
Q ss_pred EEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc
Q 038815 243 YISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD 322 (1436)
Q Consensus 243 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 322 (1436)
|++|++.+++ .||+||+.+.....+.... + .........++.+|+.
T Consensus 90 ~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~----------~-----------------------~~~~~~~~~l~~~~l~ 135 (252)
T PRK14255 90 MVFQQPNPFP-FSIYENVIYGLRLAGVKDK----------A-----------------------VLDEAVETSLKQAAIW 135 (252)
T ss_pred EEECCCccCC-CcHHHHHHHHHHHcCCCCH----------H-----------------------HHHHHHHHHHHHcCCc
Confidence 9999988887 7999999886443221000 0 0011123455666653
Q ss_pred ccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 323 ICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 323 ~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
...... -+..+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++.+ + ++++.++|+..++.
T Consensus 136 ~~i~~~-~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~ 211 (252)
T PRK14255 136 DEVKDH-LHESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQAS 211 (252)
T ss_pred cchhhH-HhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHH
Confidence 211111 1234568999999999998766 5999999999999999999999998753 3 45556788888999
Q ss_pred hhcCeEEEecCCeEEEecChHHHH
Q 038815 398 DLFDDIILLSDGLIVYLGPRELVL 421 (1436)
Q Consensus 398 ~lfD~vilL~~G~iv~~G~~~~~~ 421 (1436)
+.+|+|++|++|+++..|+..+..
T Consensus 212 ~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 212 RISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999887753
No 465
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=99.97 E-value=2.3e-30 Score=292.65 Aligned_cols=200 Identities=27% Similarity=0.420 Sum_probs=151.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGEM 254 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 254 (1436)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++ ..
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NR 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cc
Confidence 56999999999999999999999999999999999999987 9999999987654322 45699999998766 47
Q ss_pred CHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHc--CCcccccccccCc
Q 038815 255 TVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVL--GLDICADTLVGDE 332 (1436)
Q Consensus 255 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~~t~vg~~ 332 (1436)
||+||+.+... .. .. .++. ... .....+.+++.+ |++... +.
T Consensus 91 tv~~nl~~~~~--~~--~~---~~~~------------------~~~------~~~~~~~~l~~l~~~~~~~~-----~~ 134 (237)
T cd03252 91 SIRDNIALADP--GM--SM---ERVI------------------EAA------KLAGAHDFISELPEGYDTIV-----GE 134 (237)
T ss_pred hHHHHhhccCC--CC--CH---HHHH------------------HHH------HHcCcHHHHHhCcccccchh-----hc
Confidence 99999987431 00 00 0000 000 000112334444 443322 23
Q ss_pred ccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
.++.|||||||||+||+++ +++|||||+|||+.+...+.+.|+++. .+.| |+.++|+.+++ +.+|++++|+
T Consensus 135 ~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~~t-iii~sH~~~~~-~~~d~v~~l~ 210 (237)
T cd03252 135 QGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC--AGRT-VIIIAHRLSTV-KNADRIIVME 210 (237)
T ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc--CCCE-EEEEeCCHHHH-HhCCEEEEEE
Confidence 4668999999999998776 499999999999999999999999874 2445 55566777777 4699999999
Q ss_pred CCeEEEecChHHHH
Q 038815 408 DGLIVYLGPRELVL 421 (1436)
Q Consensus 408 ~G~iv~~G~~~~~~ 421 (1436)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (237)
T cd03252 211 KGRIVEQGSHDELL 224 (237)
T ss_pred CCEEEEEcCHHHHH
Confidence 99999999988764
No 466
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=99.97 E-value=6.1e-30 Score=291.91 Aligned_cols=198 Identities=24% Similarity=0.312 Sum_probs=156.7
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.+.++|+++.++ ++.+|+|||+.++|||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 477888877653 2469999999999999999999999999999999999621124579999999865
Q ss_pred cc---ccccc-eEEEeccCCCCCCCCCHHHHHHHhhhhcCC----CCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 038815 946 KQ---ETFTR-ISGYCEQNDIHSPLVTVYESLLYSAWLRLP----PEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGV 1016 (1436)
Q Consensus 946 ~~---~~~~~-~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~----~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 1016 (1436)
.. ...++ .++|++|++.+++.+|+.|++.+....... ......+..+.++++++.+++. +..+..++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 32 12223 478999999999999999998775432110 1112223345678899999997 34554421
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCH
Q 038815 1017 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSI 1080 (1436)
Q Consensus 1017 ~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~ 1080 (1436)
.+|||||||||+||++|+.+|++|+|||||+|||..+...+.+.|++++++|+|||+++|++..
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~ 213 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL 213 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH
Confidence 2599999999999999999999999999999999999999999999998779999999999754
No 467
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=99.97 E-value=1.3e-30 Score=332.84 Aligned_cols=196 Identities=21% Similarity=0.313 Sum_probs=165.1
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..++++|++|.++. ++.+|+|+|++++|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 46899999998741 23599999999999999999999999999999999998763 57999999987
Q ss_pred ccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCC
Q 038815 945 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLP 1014 (1436)
Q Consensus 945 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 1014 (1436)
.++ ..+++.++||+|++.+++. |++||+.++. +.++ +.++++++.+|+.+. .|+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~d----~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DISE----EQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCCH----HHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 653 4678899999999999885 9999998752 1222 346778888887653 35667664
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhh
Q 038815 1015 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1015 ~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
| .+||||||||++|||+|+++|+||+||||||+||+.++..|.+.|+++.+ ++|+|+++|+| +....+|+.
T Consensus 474 g-~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~--~~l~~~D~i 544 (592)
T PRK10790 474 G-NNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRL--STIVEADTI 544 (592)
T ss_pred C-CCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecch--HHHHhCCEE
Confidence 3 57999999999999999999999999999999999999999999998854 79999999998 456678884
No 468
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=99.97 E-value=1.2e-30 Score=333.01 Aligned_cols=199 Identities=24% Similarity=0.308 Sum_probs=165.3
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..++++|++|.++. +++.+|+|+|+.|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~--p~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYD--IDEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccC--CCCceEEECCEE
Confidence 36999999998742 12469999999999999999999999999999999999876 357999999987
Q ss_pred ccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-------ccccccCCC
Q 038815 945 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-------LRQSLVGLP 1014 (1436)
Q Consensus 945 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 1014 (1436)
.++ ..+++.++||+|++.+++ -|++||+.++. +...++ +.++++++..++.+ -.|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~~----~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYSR----EQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCCH----HHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 653 456788999999999886 69999997641 222233 33566777777554 247778765
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhh
Q 038815 1015 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1015 ~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
| .+||||||||++|||+|+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ....+|+.
T Consensus 478 g-~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~I 548 (582)
T PRK11176 478 G-VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEI 548 (582)
T ss_pred C-CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEE
Confidence 4 5799999999999999999999999999999999999999999999874 4799999999984 57788884
No 469
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=99.97 E-value=1.6e-30 Score=331.77 Aligned_cols=204 Identities=24% Similarity=0.379 Sum_probs=160.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGEM 254 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 254 (1436)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 56999999999999999999999999999999999999998 9999999999877654 467999999998776 6
Q ss_pred CHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCccc
Q 038815 255 TVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMI 334 (1436)
Q Consensus 255 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 334 (1436)
|++|||.++... +.+.++..++.... -.+..++. |++..||.+|+. .
T Consensus 432 Ti~~Ni~~~~~~------------------------~~~~~~i~~al~~~------~l~~~i~~--lp~Gldt~ig~~-g 478 (582)
T PRK11176 432 TIANNIAYARTE------------------------QYSREQIEEAARMA------YAMDFINK--MDNGLDTVIGEN-G 478 (582)
T ss_pred hHHHHHhcCCCC------------------------CCCHHHHHHHHHHh------CcHHHHHh--cccccCceeCCC-C
Confidence 999999875210 00111111111100 01122222 567789999975 4
Q ss_pred CCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 038815 335 RGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG 409 (1436)
Q Consensus 335 rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~G 409 (1436)
+.||||||||++|||++ +++|||||++||+.++..+.+.|++.. .++|+|+ ++|.. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~~~tvI~-VtHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ--KNRTSLV-IAHRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-HHHHhCCEEEEEECC
Confidence 67999999999999877 499999999999999999999998863 2456665 44544 567789999999999
Q ss_pred eEEEecChHHHHH
Q 038815 410 LIVYLGPRELVLD 422 (1436)
Q Consensus 410 ~iv~~G~~~~~~~ 422 (1436)
++++.|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999988753
No 470
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=99.97 E-value=2.1e-30 Score=337.60 Aligned_cols=202 Identities=24% Similarity=0.321 Sum_probs=159.1
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGE 253 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 253 (1436)
++++|+|+|++|+|||.++|+||||||||||+|+|+|.++|+ +|+|.+||.++.+... ++.++||+|++.+|+
T Consensus 491 ~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~- 566 (710)
T TIGR03796 491 EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLFE- 566 (710)
T ss_pred CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhhh-
Confidence 357999999999999999999999999999999999999998 9999999999877654 578999999997775
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEM 333 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 333 (1436)
.|++|||.++.. +.+.+...++....+ .+..++ .++...||.+|+.
T Consensus 567 gTi~eNi~l~~~-------------------------~~~~~~i~~al~~~~------l~~~i~--~lp~gl~t~i~e~- 612 (710)
T TIGR03796 567 GTVRDNLTLWDP-------------------------TIPDADLVRACKDAA------IHDVIT--SRPGGYDAELAEG- 612 (710)
T ss_pred ccHHHHhhCCCC-------------------------CCCHHHHHHHHHHhC------CHHHHH--hCcCcccceeccC-
Confidence 699999987421 011111111111000 111222 2566778999965
Q ss_pred cCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 038815 334 IRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 408 (1436)
Q Consensus 334 ~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~~ 408 (1436)
..+||||||||++|||++ +++||||||+||+.+..++.+.|++ .++|+|+ ++|.. +....+|+|++|++
T Consensus 613 G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHrl-~~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHRL-STIRDCDEIIVLER 686 (710)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecCH-HHHHhCCEEEEEeC
Confidence 568999999999999877 4999999999999999999999985 3566666 45544 45567999999999
Q ss_pred CeEEEecChHHHHH
Q 038815 409 GLIVYLGPRELVLD 422 (1436)
Q Consensus 409 G~iv~~G~~~~~~~ 422 (1436)
|++++.|+++++.+
T Consensus 687 G~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 687 GKVVQRGTHEELWA 700 (710)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999864
No 471
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=99.97 E-value=3.5e-30 Score=281.78 Aligned_cols=165 Identities=41% Similarity=0.710 Sum_probs=141.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCcccEEEEcCccCCCCCccceEEEEcCCCCCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKL--DSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDNHIGEMT 255 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~--~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 255 (1436)
+++|+|+|+++++||+++|+||||||||||+++|+|.+ +|. +|+|.++|+++.....++.++|++|++..++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 57999999999999999999999999999999999999 876 9999999998765334567999999998899999
Q ss_pred HHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccccCcccC
Q 038815 256 VRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVGDEMIR 335 (1436)
Q Consensus 256 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~r 335 (1436)
++||+.+..+ + .
T Consensus 99 ~~~~i~~~~~-------------------------------------------------------~-------------~ 110 (194)
T cd03213 99 VRETLMFAAK-------------------------------------------------------L-------------R 110 (194)
T ss_pred HHHHHHHHHH-------------------------------------------------------h-------------c
Confidence 9999976310 0 0
Q ss_pred CCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCh-hhHHhhcCeEEEecCC
Q 038815 336 GISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPA-PETYDLFDDIILLSDG 409 (1436)
Q Consensus 336 gLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~-~~~~~lfD~vilL~~G 409 (1436)
.|||||||||+||+++ +++|||||+|||..++..+.+.|+++.+ .+.|+|+ ++|.. .++.+.+|++++|++|
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii-~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLAD-TGRTIIC-SIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEE-EecCchHHHHHhcCEEEEEeCC
Confidence 5999999999998776 5999999999999999999999998754 3555555 45554 4788899999999999
Q ss_pred eEEEec
Q 038815 410 LIVYLG 415 (1436)
Q Consensus 410 ~iv~~G 415 (1436)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998765
No 472
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=2.6e-29 Score=281.60 Aligned_cols=177 Identities=20% Similarity=0.311 Sum_probs=137.9
Q ss_pred CceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCe
Q 038815 864 PHSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGY 943 (1436)
Q Consensus 864 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~ 943 (1436)
|..+-.+||+|.++ +.++++++++|-|.--..+||+||||.||||||++|.|..++ ..|+..-|-
T Consensus 584 PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKnh- 648 (807)
T KOG0066|consen 584 PPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKNH- 648 (807)
T ss_pred CCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhccc-
Confidence 44567778877654 356789999999999999999999999999999999998763 356554332
Q ss_pred ecccccccceEEEeccCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 038815 944 LKKQETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLST 1021 (1436)
Q Consensus 944 ~~~~~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1021 (1436)
+-.+|+..|+. .+....|.-|.|.-. +.+ +.++ ....|-.+||...++|+- +..|||
T Consensus 649 -------rL~iG~FdQh~~E~L~~Eetp~EyLqr~--FNl----pyq~----ARK~LG~fGL~sHAHTik----ikdLSG 707 (807)
T KOG0066|consen 649 -------RLRIGWFDQHANEALNGEETPVEYLQRK--FNL----PYQE----ARKQLGTFGLASHAHTIK----IKDLSG 707 (807)
T ss_pred -------eeeeechhhhhHHhhccccCHHHHHHHh--cCC----ChHH----HHHHhhhhhhhhccceEe----eeecCC
Confidence 23578877763 344555777766421 122 2222 345788899999888873 568999
Q ss_pred HHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCC
Q 038815 1022 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPS 1079 (1436)
Q Consensus 1022 GqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps 1079 (1436)
|||-||++|.--+..|+||+|||||++||..+...+-++|+.. ...||+++|+.+
T Consensus 708 GQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeR 762 (807)
T KOG0066|consen 708 GQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDER 762 (807)
T ss_pred cchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccc
Confidence 9999999999999999999999999999999999999999876 568999999854
No 473
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=6.9e-31 Score=263.01 Aligned_cols=193 Identities=25% Similarity=0.402 Sum_probs=162.4
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCC
Q 038815 174 RKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNH 250 (1436)
Q Consensus 174 ~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~ 250 (1436)
......||+++|+.+.+||..+|.||||||||||||+++.+.+|+ +|++++.|++++...+ ++.++||.|.+.+
T Consensus 12 ~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~---~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paL 88 (223)
T COG4619 12 LAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPT---SGTLLFEGEDVSTLKPEAYRQQVSYCAQTPAL 88 (223)
T ss_pred hcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCC---CceEEEcCccccccChHHHHHHHHHHHcCccc
Confidence 345667999999999999999999999999999999999999998 9999999999987765 5789999999999
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVG 330 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 330 (1436)
|++ ||.+||.|.-+.+.- ++|.+ .....|+.++|++..-
T Consensus 89 fg~-tVeDNlifP~~~r~r-------------------r~dr~-----------------aa~~llar~~l~~~~L---- 127 (223)
T COG4619 89 FGD-TVEDNLIFPWQIRNR-------------------RPDRA-----------------AALDLLARFALPDSIL---- 127 (223)
T ss_pred ccc-chhhccccchHHhcc-------------------CCChH-----------------HHHHHHHHcCCchhhh----
Confidence 996 999999997655421 12211 1234678888886432
Q ss_pred CcccCCCCHHHHHHHhhhh-----hhhhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 038815 331 DEMIRGISGGQKRRVTTGP-----ALALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 405 (1436)
Q Consensus 331 ~~~~rgLSGGqrkRvsia~-----a~vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vil 405 (1436)
++.+..||||||||++|.| |.||+||||||+||.++...|-+.+..+... ....++-++|+..+..+.||+++-
T Consensus 128 ~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~TsALD~~nkr~ie~mi~~~v~~-q~vAv~WiTHd~dqa~rha~k~it 206 (223)
T COG4619 128 TKNITELSGGEKQRIALIRNLQFMPKILLLDEITSALDESNKRNIEEMIHRYVRE-QNVAVLWITHDKDQAIRHADKVIT 206 (223)
T ss_pred cchhhhccchHHHHHHHHHHhhcCCceEEecCchhhcChhhHHHHHHHHHHHhhh-hceEEEEEecChHHHhhhhheEEE
Confidence 3456679999999999966 4579999999999999999999999988764 467778899999999999999999
Q ss_pred ecCCeE
Q 038815 406 LSDGLI 411 (1436)
Q Consensus 406 L~~G~i 411 (1436)
+..|++
T Consensus 207 l~~G~~ 212 (223)
T COG4619 207 LQPGHA 212 (223)
T ss_pred eccCcc
Confidence 999975
No 474
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.2e-30 Score=294.03 Aligned_cols=202 Identities=21% Similarity=0.265 Sum_probs=158.3
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC--C-eeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~--~-~~~G~i~i~g 942 (1436)
.+.++|+++.+. ++.+|+|+|+.|++||++||+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 477888887653 24699999999999999999999999999999999996431 1 2579999999
Q ss_pred eecc-----cccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 038815 943 YLKK-----QETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVS 1017 (1436)
Q Consensus 943 ~~~~-----~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1017 (1436)
.+.. ...+++.+||++|+..+++ .||+||+.+....+. .. ....+.++++++.+++.+..+..... .+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQ-SGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcC-Ccc
Confidence 7652 1234567999999988777 499999987654321 11 12334567778888875321111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~ 219 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDM 219 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999876 589999999975 56777787
No 475
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.9e-30 Score=291.57 Aligned_cols=201 Identities=23% Similarity=0.291 Sum_probs=159.5
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC--Ce--eEEEEEEc
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GY--ITGSITIS 941 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~--~~--~~G~i~i~ 941 (1436)
.+.++++++.+. ++.+|+|+|+.+.+||+++|+|+||||||||+++|+|...+ |. +.|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 367788876542 35699999999999999999999999999999999997542 21 23666666
Q ss_pred Ceecc---cccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCCC
Q 038815 942 GYLKK---QETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP----LRQSLVGLP 1014 (1436)
Q Consensus 942 g~~~~---~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 1014 (1436)
|.+.. ...+++.++|++|++.+++.+||+||+.+...... ....++..+.++++++.+++.+ ..+..
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 150 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP---- 150 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC----
Confidence 65432 12346779999999999999999999988643321 1123344456889999999964 22332
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1015 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1015 ~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..||+|||||++||++|+.+|++++|||||+|||..+...+.+.|+++.+ ++|||+++|++. .+-+..|+
T Consensus 151 -~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~ 221 (257)
T PRK14246 151 -ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADY 221 (257)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCE
Confidence 467999999999999999999999999999999999999999999999865 699999999975 56667787
No 476
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=99.97 E-value=2.3e-30 Score=289.37 Aligned_cols=190 Identities=29% Similarity=0.421 Sum_probs=146.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGEM 254 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 254 (1436)
+.+|+|+|++|++|++++|+|||||||||||++|+|..+|+ +|+|.++|.++..... ++.++|++|++.+++ .
T Consensus 17 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~ 92 (220)
T cd03245 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPT---SGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFY-G 92 (220)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCeEEECCEEhHHCCHHHHHhhEEEeCCCCcccc-c
Confidence 46999999999999999999999999999999999999887 9999999987654322 356899999987776 6
Q ss_pred CHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcccccccc-----
Q 038815 255 TVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLV----- 329 (1436)
Q Consensus 255 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v----- 329 (1436)
||.||+.+..... .. ...+.+++.+||++..+..+
T Consensus 93 tv~e~l~~~~~~~------------~~----------------------------~~~~~~l~~~~l~~~~~~~~~~~~~ 132 (220)
T cd03245 93 TLRDNITLGAPLA------------DD----------------------------ERILRAAELAGVTDFVNKHPNGLDL 132 (220)
T ss_pred hHHHHhhcCCCCC------------CH----------------------------HHHHHHHHHcCcHHHHHhccccccc
Confidence 9999997742100 00 01123445555554333221
Q ss_pred -cCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 330 -GDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 330 -g~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
-.+.+..|||||||||+||+++ +++|||||+|||+.++..+.+.|+++++ + ++|+.++|+.... +++|++
T Consensus 133 ~~~~~~~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~-~~~d~v 208 (220)
T cd03245 133 QIGERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLG--D-KTLIIITHRPSLL-DLVDRI 208 (220)
T ss_pred eecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcC--C-CEEEEEeCCHHHH-HhCCEE
Confidence 1123568999999999998766 5999999999999999999999998753 3 4455566666665 799999
Q ss_pred EEecCCeEEEec
Q 038815 404 ILLSDGLIVYLG 415 (1436)
Q Consensus 404 ilL~~G~iv~~G 415 (1436)
++|++|++++.|
T Consensus 209 ~~l~~g~i~~~~ 220 (220)
T cd03245 209 IVMDSGRIVADG 220 (220)
T ss_pred EEEeCCeEeecC
Confidence 999999998764
No 477
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.5e-30 Score=294.23 Aligned_cols=214 Identities=18% Similarity=0.312 Sum_probs=159.6
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEEcCccCCCC-----CccceE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF-----EPQRVA 241 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~ 241 (1436)
+++..++++..+|+|+|++|++||+++|+|+|||||||||++|+|.++ |....+|+|.++|+++... ..++.+
T Consensus 28 ~~l~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 107 (271)
T PRK14238 28 QNLNLWYGEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSVEELRTNV 107 (271)
T ss_pred eeeEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccHHHHhhhE
Confidence 344444445679999999999999999999999999999999999986 2112399999999887421 124579
Q ss_pred EEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCC
Q 038815 242 AYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGL 321 (1436)
Q Consensus 242 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL 321 (1436)
+|++|++.+++ .||+||+.++.+..+... + . .....+...++.+++
T Consensus 108 ~~v~q~~~~~~-~tv~eni~~~~~~~~~~~------~---~------------------------~~~~~~~~~l~~~~~ 153 (271)
T PRK14238 108 GMVFQKPNPFP-KSIYDNVTYGPKIHGIKD------K---K------------------------TLDEIVEKSLRGAAI 153 (271)
T ss_pred EEEecCCcccc-ccHHHHHHHHHHhcCCCc------H---H------------------------HHHHHHHHHHHHcCC
Confidence 99999988777 599999998643221100 0 0 001122344555543
Q ss_pred cccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 038815 322 DICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPET 396 (1436)
Q Consensus 322 ~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~ 396 (1436)
........ +..++.|||||||||+||+++ +++|||||+|||+.+..++.+.|+++.. + ++++.++|+.+++
T Consensus 154 ~~~l~~~~-~~~~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~i 229 (271)
T PRK14238 154 WDELKDRL-HDNAYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK--D-YSIIIVTHNMQQA 229 (271)
T ss_pred cchHHHHH-hcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc--C-CEEEEEEcCHHHH
Confidence 21111111 345668999999999998766 5999999999999999999999998753 4 4566678888899
Q ss_pred HhhcCeEEEecCCeEEEecChHHH
Q 038815 397 YDLFDDIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 397 ~~lfD~vilL~~G~iv~~G~~~~~ 420 (1436)
.+++|++++|++|++++.|+.+++
T Consensus 230 ~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 230 ARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999998776
No 478
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.3e-30 Score=304.50 Aligned_cols=197 Identities=28% Similarity=0.412 Sum_probs=158.8
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCC
Q 038815 177 HLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGE 253 (1436)
Q Consensus 177 ~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 253 (1436)
+.++|+|+|+++++||.++|+|++|||||||++.|+|-++|+ +|+|+.||.++.+... ++.++.++|.. |+..
T Consensus 350 ~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~-hlF~ 425 (573)
T COG4987 350 QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRV-HLFS 425 (573)
T ss_pred ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccch-HHHH
Confidence 346999999999999999999999999999999999999998 9999999999877655 46789999986 5555
Q ss_pred CCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCC-------ccccc
Q 038815 254 MTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGL-------DICAD 326 (1436)
Q Consensus 254 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL-------~~~~~ 326 (1436)
-|+|+||..+. |+...++ ..++++..|| ++..|
T Consensus 426 ~Tlr~NL~lA~-------------------------~~AsDEe---------------l~~aL~qvgL~~l~~~~p~gl~ 465 (573)
T COG4987 426 GTLRDNLRLAN-------------------------PDASDEE---------------LWAALQQVGLEKLLESAPDGLN 465 (573)
T ss_pred HHHHHHHhhcC-------------------------CCCCHHH---------------HHHHHHHcCHHHHHHhChhhhh
Confidence 69999998853 1111111 1223344444 34567
Q ss_pred ccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 038815 327 TLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFD 401 (1436)
Q Consensus 327 t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD 401 (1436)
|.+|+ ..++||||||||++|||++ +++|||||.|||+.|..++++.+.+.+ .++|+++ ++|+... .+.||
T Consensus 466 t~lge-~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~--~~kTll~-vTHrL~~-le~~d 540 (573)
T COG4987 466 TWLGE-GGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA--EGKTLLM-VTHRLRG-LERMD 540 (573)
T ss_pred chhcc-CCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh--cCCeEEE-Eeccccc-HhhcC
Confidence 88886 5678999999999999877 499999999999999999999998744 3566665 5565554 45789
Q ss_pred eEEEecCCeEEEecChHHHHH
Q 038815 402 DIILLSDGLIVYLGPRELVLD 422 (1436)
Q Consensus 402 ~vilL~~G~iv~~G~~~~~~~ 422 (1436)
+|++|++|+++++|.++++.+
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEEECCeeeecCCHHhhhc
Confidence 999999999999999998864
No 479
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=99.97 E-value=6.8e-30 Score=285.91 Aligned_cols=192 Identities=27% Similarity=0.295 Sum_probs=152.5
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCccceEEEEcCCCCC
Q 038815 171 LPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEPQRVAAYISQHDNH 250 (1436)
Q Consensus 171 ~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~ 250 (1436)
+..++.++++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|++... ..+...+
T Consensus 28 ~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~---------~~~~~~~ 95 (224)
T cd03220 28 RKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPD---SGTVTVRGRVSSL---------LGLGGGF 95 (224)
T ss_pred hhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEchh---------hcccccC
Confidence 345666778999999999999999999999999999999999999887 9999999986431 1122345
Q ss_pred CCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCccccccccc
Q 038815 251 IGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDICADTLVG 330 (1436)
Q Consensus 251 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 330 (1436)
.+.+||+||+.+.....+.. . .+.....+.+++.+||++..++.+
T Consensus 96 ~~~~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 140 (224)
T cd03220 96 NPELTGRENIYLNGRLLGLS----------R------------------------KEIDEKIDEIIEFSELGDFIDLPV- 140 (224)
T ss_pred CCCCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCCh-
Confidence 57899999998764322110 0 001123456788899987766554
Q ss_pred CcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 038815 331 DEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 405 (1436)
Q Consensus 331 ~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vil 405 (1436)
..|||||||||+||+++ +++|||||+|||+.++..+.+.|++.+. . +++|+.++|+.+++.+++|++++
T Consensus 141 ----~~LSgG~~qrv~laral~~~p~llllDEP~~gLD~~~~~~~~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~ 214 (224)
T cd03220 141 ----KTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAAFQEKCQRRLRELLK-Q-GKTVILVSHDPSSIKRLCDRALV 214 (224)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEE
Confidence 46999999999998766 5999999999999999999999998765 3 44566678888899999999999
Q ss_pred ecCCeEEEec
Q 038815 406 LSDGLIVYLG 415 (1436)
Q Consensus 406 L~~G~iv~~G 415 (1436)
|++|++++.|
T Consensus 215 l~~G~i~~~g 224 (224)
T cd03220 215 LEKGKIRFDG 224 (224)
T ss_pred EECCEEEecC
Confidence 9999998765
No 480
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=99.97 E-value=3.7e-30 Score=278.79 Aligned_cols=152 Identities=24% Similarity=0.399 Sum_probs=133.2
Q ss_pred EeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc----ccccceEEEeccCC---CCCCC
Q 038815 894 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ----ETFTRISGYCEQND---IHSPL 966 (1436)
Q Consensus 894 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d---~~~~~ 966 (1436)
+|+++|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+. .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRP--PASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 8999999999999999999999999999999999865 357999999976542 12456799999984 57788
Q ss_pred CCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCC
Q 038815 967 VTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1046 (1436)
Q Consensus 967 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPT 1046 (1436)
+|++|++.+... ||||||||++||++|+.+|++|+|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999976421 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1047 SGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1047 sgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+|||+.+...+++.|+++.++|+|||+++|+++ ++.+..|+
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~ 173 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDR 173 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999777899999999974 56566665
No 481
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=7.3e-30 Score=295.47 Aligned_cols=212 Identities=22% Similarity=0.283 Sum_probs=162.2
Q ss_pred cccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEEcCccCCCC-----CccceE
Q 038815 169 QILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSL--KVSGRVTYNGHNMDEF-----EPQRVA 241 (1436)
Q Consensus 169 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~ 241 (1436)
+++..+++++.+|+|+|+.|++||+++|+|||||||||||++|+|.+++.. ..+|+|.++|.++... ..++.+
T Consensus 43 ~~l~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~~~~~~~i 122 (285)
T PRK14254 43 RDLNVFYGDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDPVALRRRI 122 (285)
T ss_pred EEEEEEECCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccchHhhhccE
Confidence 344444455679999999999999999999999999999999999986310 1389999999886432 124679
Q ss_pred EEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCC
Q 038815 242 AYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGL 321 (1436)
Q Consensus 242 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL 321 (1436)
+|++|++.+++. ||.||+.+.....+.. . +....++.+++.+||
T Consensus 123 ~~v~q~~~l~~~-tv~enl~~~~~~~~~~----------~-------------------------~~~~~~~~~l~~~~l 166 (285)
T PRK14254 123 GMVFQKPNPFPK-SIYDNVAYGLKIQGYD----------G-------------------------DIDERVEESLRRAAL 166 (285)
T ss_pred EEEecCCccCcC-CHHHHHHHHHHHcCCc----------H-------------------------HHHHHHHHHHHHcCC
Confidence 999999887875 9999998865432110 0 011224567888888
Q ss_pred cccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 038815 322 DICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPET 396 (1436)
Q Consensus 322 ~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~ 396 (1436)
.+..... -+..+..|||||||||+||+++ +|+|||||+|||+.+...+.+.|+++++ +. +|+.++|+..++
T Consensus 167 ~~~i~~~-~~~~~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~--~~-tiii~tH~~~~i 242 (285)
T PRK14254 167 WDEVKDQ-LDSSGLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE--EY-TVVIVTHNMQQA 242 (285)
T ss_pred CchhHHH-HhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CC-EEEEEeCCHHHH
Confidence 5311001 1244568999999999998776 4999999999999999999999999864 34 566678888899
Q ss_pred HhhcCeEE-EecCCeEEEecChHHH
Q 038815 397 YDLFDDII-LLSDGLIVYLGPRELV 420 (1436)
Q Consensus 397 ~~lfD~vi-lL~~G~iv~~G~~~~~ 420 (1436)
.+++|+++ +|++|++++.|+.+++
T Consensus 243 ~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 243 ARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 99999975 6799999999988765
No 482
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.2e-30 Score=294.40 Aligned_cols=203 Identities=23% Similarity=0.256 Sum_probs=158.4
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEEcC
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGSITISG 942 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~--~-~~~~G~i~i~g 942 (1436)
.+.++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 588899987653 2358999999999999999999999999999999999753 1 13589999999
Q ss_pred eeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCC
Q 038815 943 YLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGV 1016 (1436)
Q Consensus 943 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 1016 (1436)
.+... ..+++.+||++|+..+++ .||+||+.+....+. ..+.+...+.+.++++.+++.. +.+. ... .+
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~-~~~-~~ 165 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDR-LHD-NA 165 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHH-Hhc-Cc
Confidence 86531 234667999999988877 499999988654321 1122223445677777776532 2111 111 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1017 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1017 ~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++-+..|+
T Consensus 166 ~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~ 235 (271)
T PRK14238 166 YGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDK 235 (271)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCE
Confidence 68999999999999999999999999999999999999999999999866 799999999975 45566777
No 483
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=99.97 E-value=7.1e-30 Score=291.54 Aligned_cols=200 Identities=26% Similarity=0.263 Sum_probs=157.3
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee-
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL- 944 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~- 944 (1436)
.+.++|+++.++ .+.+|+|+|+.+++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccc
Confidence 367778876543 2468999999999999999999999999999999999865 357999999865
Q ss_pred ----ccc---c----cccceEEEeccCCC--CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCc-ccccc
Q 038815 945 ----KKQ---E----TFTRISGYCEQNDI--HSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNP-LRQSL 1010 (1436)
Q Consensus 945 ----~~~---~----~~~~~~gyv~Q~d~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 1010 (1436)
... . ..++.++|++|++. ..+.+|+.|++.+..... .. ....+..+.++++++.+++.+ ..+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 321 1 12346899999974 445679999986542211 11 111233466789999999963 55554
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1011 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1011 vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
++.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|++. ++.+..|+
T Consensus 146 -----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~ 218 (253)
T TIGR02323 146 -----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQR 218 (253)
T ss_pred -----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 4679999999999999999999999999999999999999999999998764 899999999975 45566677
No 484
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=99.97 E-value=2.8e-30 Score=292.20 Aligned_cols=201 Identities=24% Similarity=0.366 Sum_probs=150.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGEM 254 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 254 (1436)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++ .
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~ 91 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPT---SGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-G 91 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCC---CCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-h
Confidence 46999999999999999999999999999999999999887 9999999987654322 356999999987765 6
Q ss_pred CHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHc--CCcccccccccCc
Q 038815 255 TVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVL--GLDICADTLVGDE 332 (1436)
Q Consensus 255 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~~t~vg~~ 332 (1436)
||+||+.+...... ..+.. ... .......+++.+ |++...+ .
T Consensus 92 tv~e~l~~~~~~~~-------~~~~~------------------~~~------~~~~~~~~~~~l~~~~~~~~~-----~ 135 (238)
T cd03249 92 TIAENIRYGKPDAT-------DEEVE------------------EAA------KKANIHDFIMSLPDGYDTLVG-----E 135 (238)
T ss_pred hHHHHhhccCCCCC-------HHHHH------------------HHH------HHcChHHHHHhhccccceeec-----c
Confidence 99999987532110 00000 000 000012223333 3433222 3
Q ss_pred ccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 038815 333 MIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 407 (1436)
Q Consensus 333 ~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~vilL~ 407 (1436)
.++.|||||||||+||+++ +++|||||+|||+.++.++.+.|+++. .+.+ |+.++|+.+++. .+|+|++|+
T Consensus 136 ~~~~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~--~g~~-vi~~sh~~~~~~-~~d~v~~l~ 211 (238)
T cd03249 136 RGSQLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM--KGRT-TIVIAHRLSTIR-NADLIAVLQ 211 (238)
T ss_pred CCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc--CCCE-EEEEeCCHHHHh-hCCEEEEEE
Confidence 4568999999999998766 599999999999999999999999874 3444 555667777775 899999999
Q ss_pred CCeEEEecChHHHHH
Q 038815 408 DGLIVYLGPRELVLD 422 (1436)
Q Consensus 408 ~G~iv~~G~~~~~~~ 422 (1436)
+|++++.|+.+++.+
T Consensus 212 ~G~i~~~~~~~~~~~ 226 (238)
T cd03249 212 NGQVVEQGTHDELMA 226 (238)
T ss_pred CCEEEEeCCHHHHhh
Confidence 999999999877654
No 485
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.97 E-value=3.5e-30 Score=326.71 Aligned_cols=196 Identities=28% Similarity=0.445 Sum_probs=158.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcCCCCCCCCC
Q 038815 178 LTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQHDNHIGEM 254 (1436)
Q Consensus 178 ~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 254 (1436)
+++|+|+|++++|||.++|+||||||||||+++|+|.++|+ +|+|.+||.++.+... ++.++||+|++.+|+ .
T Consensus 353 ~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~ 428 (574)
T PRK11160 353 QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-A 428 (574)
T ss_pred CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-c
Confidence 46999999999999999999999999999999999999998 9999999999877654 467999999987776 5
Q ss_pred CHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCC------ccccccc
Q 038815 255 TVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGL------DICADTL 328 (1436)
Q Consensus 255 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~~t~ 328 (1436)
|++|||.++.. +.+.+. ++..++..|+ ++..||.
T Consensus 429 ti~~Ni~~~~~-------------------------~~~~~~---------------i~~al~~~~l~~~i~~p~GldT~ 468 (574)
T PRK11160 429 TLRDNLLLAAP-------------------------NASDEA---------------LIEVLQQVGLEKLLEDDKGLNAW 468 (574)
T ss_pred cHHHHhhcCCC-------------------------ccCHHH---------------HHHHHHHcCCHHHHcCccccCch
Confidence 99999988531 000011 1222333333 4567899
Q ss_pred ccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 038815 329 VGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDI 403 (1436)
Q Consensus 329 vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lfD~v 403 (1436)
+|+. .+.||||||||++|||++ +++|||||++||+.++..+.+.|++.. .++|+|++.|+ .+. ...+|+|
T Consensus 469 vge~-g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~~~tviiitHr-~~~-~~~~d~i 543 (574)
T PRK11160 469 LGEG-GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--QNKTVLMITHR-LTG-LEQFDRI 543 (574)
T ss_pred hcCC-CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--CCCEEEEEecC-hhH-HHhCCEE
Confidence 9975 567999999999999877 499999999999999999999999864 35666665444 444 4569999
Q ss_pred EEecCCeEEEecChHHHHH
Q 038815 404 ILLSDGLIVYLGPRELVLD 422 (1436)
Q Consensus 404 ilL~~G~iv~~G~~~~~~~ 422 (1436)
++|++|++++.|+++++.+
T Consensus 544 ~~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 544 CVMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEEeCCeEEEeCCHHHHHh
Confidence 9999999999999998763
No 486
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=99.97 E-value=7.9e-30 Score=290.32 Aligned_cols=204 Identities=26% Similarity=0.288 Sum_probs=155.1
Q ss_pred eEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeecc
Q 038815 867 LTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKK 946 (1436)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~ 946 (1436)
+.++|+++.++ ++.+|+|+|+.|++|+++||+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 45677776543 24699999999999999999999999999999999997421145799999997653
Q ss_pred cc---c-ccceEEEeccCCCCCCCCCHHHHHHHhh-hhcC--CC-CCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 038815 947 QE---T-FTRISGYCEQNDIHSPLVTVYESLLYSA-WLRL--PP-EVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVS 1017 (1436)
Q Consensus 947 ~~---~-~~~~~gyv~Q~d~~~~~lTv~E~l~f~a-~lr~--~~-~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1017 (1436)
.. . .++.++|++|+..+++.+|+.+++.+.. .++. .. ........++++++++.+++. +..+..+ .+
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 21 1 2346999999988888888777654321 1111 00 011223345678899999995 4444432 13
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHH-hhh
Q 038815 1018 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFES-FDE 1088 (1436)
Q Consensus 1018 ~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~-FD~ 1088 (1436)
.|||||||||+||++|+.+|+||+|||||+|||..+...+.+.|+++++.|+|||+++|++.. +-.. .|+
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~-~~~~~~d~ 215 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRI-LDYIKPDY 215 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-HHhhhCCE
Confidence 699999999999999999999999999999999999999999999998778999999999763 3232 465
No 487
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.4e-30 Score=293.75 Aligned_cols=180 Identities=27% Similarity=0.338 Sum_probs=143.2
Q ss_pred EEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc---ccccceEEEeccCCCCCCCCCH
Q 038815 893 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ---ETFTRISGYCEQNDIHSPLVTV 969 (1436)
Q Consensus 893 ~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv 969 (1436)
.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++ .||
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 58999999999999999999999999999999999865 357999999976432 234567999999988776 699
Q ss_pred HHHHHHhhhhcCCCCCCHHHH-----HHHHHHHHHHc--CCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 038815 970 YESLLYSAWLRLPPEVDSETR-----KMFIEEIMELV--ELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1042 (1436)
Q Consensus 970 ~E~l~f~a~lr~~~~~~~~~~-----~~~v~~~l~~l--~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~l 1042 (1436)
+||+.+.... ...... ...+++.++.+ ++.+..+.. +..||||||||++||++|+.+|++|+|
T Consensus 93 ~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllL 162 (234)
T cd03251 93 AENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GVKLSGGQRQRIAIARALLKDPPILIL 162 (234)
T ss_pred HHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999775321 111111 11234455554 454444433 467999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1043 DEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1043 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
||||+|||+.+...+.+.|+++.+ |.|||+++|++.. + +..|+
T Consensus 163 DEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~-~-~~~d~ 205 (234)
T cd03251 163 DEATSALDTESERLVQAALERLMK-NRTTFVIAHRLST-I-ENADR 205 (234)
T ss_pred eCccccCCHHHHHHHHHHHHHhcC-CCEEEEEecCHHH-H-hhCCE
Confidence 999999999999999999999864 8999999999853 4 34777
No 488
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1e-29 Score=292.89 Aligned_cols=203 Identities=19% Similarity=0.210 Sum_probs=158.6
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEc
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSITIS 941 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~---~~~G~i~i~ 941 (1436)
..+.++|+++.+. ++.+|+|+|+.+++||+++|+||||||||||+++|+|..... +.+|+|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 3688899987653 246999999999999999999999999999999999975321 247999999
Q ss_pred Ceeccc-----ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 038815 942 GYLKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGV 1016 (1436)
Q Consensus 942 g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1016 (1436)
|.+... ..+++.++|++|+..+++. ||.|++.+....+. ... ...+.+++.++.+++.......... .+
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~-~~ 159 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YKG-NLDELVEDSLRRAAIWEEVKDKLKE-KG 159 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---chH-HHHHHHHHHHHHcccchhhHHHhcC-Cc
Confidence 976531 2345689999999887764 99999987643321 111 2234467788888874211111111 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1017 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1017 ~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
..|||||||||+||++|+.+|++|+|||||+|||..+...+.+.|+++.+ ++|||+++|+++ ++.+..|+
T Consensus 160 ~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~ 229 (274)
T PRK14265 160 TALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADW 229 (274)
T ss_pred ccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCE
Confidence 67999999999999999999999999999999999999999999999865 789999999975 46667777
No 489
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=99.97 E-value=1.2e-30 Score=331.47 Aligned_cols=196 Identities=31% Similarity=0.460 Sum_probs=162.2
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..++|+|++|.++. ++.+|+|+|++++|||.+||+||||||||||++.|.|..+ +.+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCEe
Confidence 45999999998752 3579999999999999999999999999999999999876 358999999987
Q ss_pred ccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcC-------CCcccccccCCC
Q 038815 945 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVE-------LNPLRQSLVGLP 1014 (1436)
Q Consensus 945 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~-------L~~~~~~~vg~~ 1014 (1436)
.++ ..+++.++||+|+..++. -||+||+.++. | +.++++ ++++++..+ +.+-.|+.+|..
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~----~-~at~ee----i~~a~k~a~~~d~I~~lp~g~dt~vge~ 462 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR----P-DATDEE----IEEALKLANAHEFIANLPDGYDTIVGER 462 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC----C-CCCHHH----HHHHHHHhChHHHHHhCcccccceecCC
Confidence 654 567889999999999987 89999998862 1 223332 334444333 333568899844
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1015 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1015 ~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
..+||||||||++||||++.+|+||+||||||+||+.+...|++.++++. +|+|+++++|+++. ....|+
T Consensus 463 -G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRlst--i~~aD~ 532 (567)
T COG1132 463 -GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLST--IKNADR 532 (567)
T ss_pred -CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHhH--HHhCCE
Confidence 45899999999999999999999999999999999999999999999876 57899999999853 334787
No 490
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.5e-30 Score=292.67 Aligned_cols=195 Identities=25% Similarity=0.385 Sum_probs=151.4
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+. +.+.+|+|+|+.+++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYD------------EKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecC------------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeH
Confidence 366778876542 12359999999999999999999999999999999999865 3579999999765
Q ss_pred cc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccc-------cCCCC
Q 038815 946 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSL-------VGLPG 1015 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~-------vg~~~ 1015 (1436)
.. ..+++.++|++|+..+++. ||+|++.+... ... ...+++.++.+++.+..+.+ .+. .
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~ 136 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NAT----DEEVIEAAKEAGAHDFIMKLPNGYDTVLGE-N 136 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCC----HHHHHHHHHHhChHHHHHhCcccccCHhhc-C
Confidence 32 2345679999999887775 99999976421 111 12234455555554433322 111 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+..|||||||||+||++|+.+|++|+|||||+|||+.+...+++.|+++. +|+|||+++|++.. + +..|+
T Consensus 137 ~~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~-~-~~~d~ 206 (229)
T cd03254 137 GGNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLST-I-KNADK 206 (229)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHHH-H-hhCCE
Confidence 46899999999999999999999999999999999999999999999985 48999999999854 3 45676
No 491
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.97 E-value=2.2e-30 Score=328.48 Aligned_cols=198 Identities=26% Similarity=0.394 Sum_probs=165.5
Q ss_pred ceeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCee
Q 038815 865 HSLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYL 944 (1436)
Q Consensus 865 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~ 944 (1436)
..++|+|+++.++. +++.+|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--p~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWD--PQQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 46999999998742 12458999999999999999999999999999999999866 457999999987
Q ss_pred ccc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcc------cccccCCCC
Q 038815 945 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPL------RQSLVGLPG 1015 (1436)
Q Consensus 945 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~------~~~~vg~~~ 1015 (1436)
..+ ..+++.++||+|+..+++ -|++||+.++. | +.+ ++.++++++.+++.+. .||.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~~----~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA----P-NAS----DEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC----C-ccC----HHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 643 456788999999998876 59999998752 1 222 3346788888888764 35667654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhhh
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDEA 1089 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~~ 1089 (1436)
...||||||||++|||+|+++|+||+||||||+||+.++..|++.|+++. +++|+|+++|+++. ...+|+.
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~~--~~~~d~i 543 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLTG--LEQFDRI 543 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChhH--HHhCCEE
Confidence 45799999999999999999999999999999999999999999999885 48999999999864 4568883
No 492
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=99.97 E-value=1.3e-30 Score=292.51 Aligned_cols=202 Identities=25% Similarity=0.324 Sum_probs=156.1
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.++.. ++..+|+|+|+.|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~~~----------~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 78 (226)
T cd03248 11 IVKFQNVTFAYPTR----------PDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQ--PQGGQVLLDGKPI 78 (226)
T ss_pred eEEEEEEEEEeCCC----------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCcEEEECCCch
Confidence 47788888776421 12359999999999999999999999999999999999865 3579999999764
Q ss_pred cc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHc--CCCcccccccCCCCCCCCC
Q 038815 946 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELV--ELNPLRQSLVGLPGVSGLS 1020 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l--~L~~~~~~~vg~~~~~~lS 1020 (1436)
.. ...++.++|++|+..+++ .||+||+.+..................+++.++.+ |+.+..+.. +..||
T Consensus 79 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~-----~~~LS 152 (226)
T cd03248 79 SQYEHKYLHSKVSLVGQEPVLFA-RSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEK-----GSQLS 152 (226)
T ss_pred HHcCHHHHHhhEEEEecccHHHh-hhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcC-----CCcCC
Confidence 32 234567999999987776 59999997643211000000011112356778888 676655544 46799
Q ss_pred HHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1021 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1021 gGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++. + +..|+
T Consensus 153 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~-~-~~~d~ 217 (226)
T cd03248 153 GGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYDWPE-RRTVLVIAHRLST-V-ERADQ 217 (226)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEECCHHH-H-HhCCE
Confidence 9999999999999999999999999999999999999999999865 6899999999864 4 34666
No 493
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=99.97 E-value=6.5e-30 Score=286.45 Aligned_cols=201 Identities=24% Similarity=0.342 Sum_probs=155.2
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCCCc---cceEEEEcC
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFEP---QRVAAYISQ 246 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q 246 (1436)
++....+++++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|
T Consensus 12 ~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q 88 (225)
T PRK10247 12 NVGYLAGDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPT---SGTLLFEGEDISTLKPEIYRQQVSYCAQ 88 (225)
T ss_pred ccEEeeCCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCeEEECCEEcCcCCHHHHHhccEEEec
Confidence 3444444567999999999999999999999999999999999999887 9999999988754432 357899999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCc-ccc
Q 038815 247 HDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLD-ICA 325 (1436)
Q Consensus 247 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~ 325 (1436)
++.+++ .||+||+.+.....+. . . ....++.+++.+||. ...
T Consensus 89 ~~~l~~-~tv~enl~~~~~~~~~--~--------------------~--------------~~~~~~~~l~~~~l~~~~~ 131 (225)
T PRK10247 89 TPTLFG-DTVYDNLIFPWQIRNQ--Q--------------------P--------------DPAIFLDDLERFALPDTIL 131 (225)
T ss_pred cccccc-ccHHHHHHhHHhhcCC--C--------------------h--------------HHHHHHHHHHHcCCChHHh
Confidence 988776 5999999875332110 0 0 001245678899995 334
Q ss_pred cccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 038815 326 DTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLF 400 (1436)
Q Consensus 326 ~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~lf 400 (1436)
++ .++.|||||||||+||+++ +++|||||+|||+.+...+.+.|+++.+..+.| |+.++|+.+++. .+
T Consensus 132 ~~-----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~t-vii~sh~~~~~~-~~ 204 (225)
T PRK10247 132 TK-----NIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIA-VLWVTHDKDEIN-HA 204 (225)
T ss_pred cC-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEECChHHHH-hC
Confidence 43 4567999999999998766 599999999999999999999999986543444 555667777774 69
Q ss_pred CeEEEec-CCeEEEecCh
Q 038815 401 DDIILLS-DGLIVYLGPR 417 (1436)
Q Consensus 401 D~vilL~-~G~iv~~G~~ 417 (1436)
|++++|+ ++..+.+|..
T Consensus 205 d~i~~l~~~~~~~~~~~~ 222 (225)
T PRK10247 205 DKVITLQPHAGEMQEARY 222 (225)
T ss_pred CEEEEEecccchHhhhhh
Confidence 9999995 5656666644
No 494
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.5e-30 Score=320.39 Aligned_cols=190 Identities=26% Similarity=0.307 Sum_probs=158.0
Q ss_pred ceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc----ccccceEEEeccCCCCCCC
Q 038815 891 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ----ETFTRISGYCEQNDIHSPL 966 (1436)
Q Consensus 891 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d~~~~~ 966 (1436)
++.+|+|||+.+++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|+..+++.
T Consensus 10 ~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 10 GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 3579999999999999999999999999999999999865 357999999986532 1234679999999888889
Q ss_pred CCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCcceecCCC
Q 038815 967 VTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1046 (1436)
Q Consensus 967 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il~lDEPT 1046 (1436)
+||+|++.+..........+.++..+.++++++.+++.+..+..+ ..|||||||||+||++|+.+|++|+|||||
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt 162 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPT 162 (491)
T ss_pred CCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 999999987532111111123334457889999999987777653 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1047 SGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1047 sgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
+|||+.+...+++.|+++++.|.|||+++|++. ++-+..|+
T Consensus 163 ~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~ 203 (491)
T PRK10982 163 SSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDE 203 (491)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999999888999999999974 45566777
No 495
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=99.97 E-value=6.3e-30 Score=290.57 Aligned_cols=184 Identities=26% Similarity=0.349 Sum_probs=153.2
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.+. ++.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~~~-- 66 (251)
T PRK09544 4 LVSLENVSVSFG-------------QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVA--PDEGVIKRNGK-- 66 (251)
T ss_pred EEEEeceEEEEC-------------CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCc--
Confidence 367888877653 2469999999999999999999999999999999999865 35799999872
Q ss_pred ccccccceEEEeccCCCCCCC--CCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 038815 946 KQETFTRISGYCEQNDIHSPL--VTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQ 1023 (1436)
Q Consensus 946 ~~~~~~~~~gyv~Q~d~~~~~--lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1023 (1436)
..++|++|+..+++. .|+++++.+. + ... .+.+.++++.++|.+..+.. +..|||||
T Consensus 67 ------~~i~~v~q~~~~~~~l~~~~~~~~~~~-----~-~~~----~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq 125 (251)
T PRK09544 67 ------LRIGYVPQKLYLDTTLPLTVNRFLRLR-----P-GTK----KEDILPALKRVQAGHLIDAP-----MQKLSGGE 125 (251)
T ss_pred ------cCEEEeccccccccccChhHHHHHhcc-----c-ccc----HHHHHHHHHHcCChHHHhCC-----hhhCCHHH
Confidence 358999999877665 4778876432 1 111 23467899999998877765 35799999
Q ss_pred HHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHHhhh
Q 038815 1024 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1024 rkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||++||++|+.+|++|+|||||+|||+.+...+++.|++++++ |+|||+++|++. ++.+..|+
T Consensus 126 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~ 190 (251)
T PRK09544 126 TQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDE 190 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999998765 899999999975 56666777
No 496
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=2.3e-30 Score=261.38 Aligned_cols=208 Identities=26% Similarity=0.313 Sum_probs=172.4
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEEcCccCCCC----------Cc--
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF----------EP-- 237 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~----------~~-- 237 (1436)
.+.++++...+|++||+..+.|+.+.|+|.|||||||+|++|.=+..|+ .|.|.+||..+.-. +.
T Consensus 11 dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~---~G~I~v~geei~~k~~~~G~l~~ad~~q 87 (256)
T COG4598 11 DLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---AGSIRVNGEEIRLKRDKDGQLKPADKRQ 87 (256)
T ss_pred HHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCC---CceEEECCeEEEeeeCCCCCeeeCCHHH
Confidence 4567788889999999999999999999999999999999999998887 99999999875311 11
Q ss_pred ----cceEEEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHH
Q 038815 238 ----QRVAAYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTD 313 (1436)
Q Consensus 238 ----~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (1436)
+...++|+|+.+++..|||.||+.-+..-- -..++ .++....+
T Consensus 88 ~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhV---------Lg~~k------------------------~ea~e~Ae 134 (256)
T COG4598 88 LQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHV---------LGVSK------------------------AEAIERAE 134 (256)
T ss_pred HHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHh---------hcCCH------------------------HHHHHHHH
Confidence 124689999999999999999997542110 00111 12233467
Q ss_pred HHHHHcCCcccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEE
Q 038815 314 YYLKVLGLDICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVIS 388 (1436)
Q Consensus 314 ~~l~~lgL~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~ 388 (1436)
.+|...||.+..| .++..|||||+||++||||+ ++++|||||+|||.-.-++++.+++++.. ++|.++
T Consensus 135 ~~L~kVGi~ek~~-----~YP~~LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeE-grTMv~- 207 (256)
T COG4598 135 KYLAKVGIAEKAD-----AYPAHLSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEE-GRTMVV- 207 (256)
T ss_pred HHHHHhCchhhhh-----cCccccCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHh-CCeEEE-
Confidence 7899999988776 45667999999999999987 49999999999999999999999999974 555555
Q ss_pred EecChhhHHhhcCeEEEecCCeEEEecChHHH
Q 038815 389 LLQPAPETYDLFDDIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 389 ~~q~~~~~~~lfD~vilL~~G~iv~~G~~~~~ 420 (1436)
++|....+-+...+|+.|++|.|-++||++++
T Consensus 208 VTHEM~FAR~Vss~v~fLh~G~iEE~G~P~qv 239 (256)
T COG4598 208 VTHEMGFARDVSSHVIFLHQGKIEEEGPPEQV 239 (256)
T ss_pred EeeehhHHHhhhhheEEeecceecccCChHHH
Confidence 78889999999999999999999999999987
No 497
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=99.97 E-value=6.4e-30 Score=290.59 Aligned_cols=182 Identities=24% Similarity=0.336 Sum_probs=153.0
Q ss_pred EeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeeccc---ccccceEEEeccCCCCCCCCCHH
Q 038815 894 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLKKQ---ETFTRISGYCEQNDIHSPLVTVY 970 (1436)
Q Consensus 894 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~ 970 (1436)
+|+|||+.+++||+++|+|+||||||||+++|+|..+ .+|+|.++|.+... ...++.+||++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999764 27999999986532 22345689999998888889999
Q ss_pred HHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhh-------CCCcceec
Q 038815 971 ESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1043 (1436)
Q Consensus 971 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~-------~p~il~lD 1043 (1436)
||+.+.... ..+.++..+.++++++.++|.+..+.. ++.||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRS-----VNQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 112233345688999999998776665 35799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1044 EPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1044 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
|||+|||+.+...+.+.|++++++|.|||+++|++. ++-+..|+
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~ 202 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADR 202 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999999999877999999999975 46666777
No 498
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=99.97 E-value=1.5e-29 Score=288.62 Aligned_cols=215 Identities=24% Similarity=0.313 Sum_probs=161.4
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcC--CCCCCCcccEEEEcCccCCCCCc---cc-eEEE
Q 038815 170 ILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGK--LDSSLKVSGRVTYNGHNMDEFEP---QR-VAAY 243 (1436)
Q Consensus 170 ~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~--~~~~~~~~G~I~~~G~~~~~~~~---~~-~~~y 243 (1436)
++..+++++.+|+|||+++++||+++|+|||||||||||++|+|. ++|+ +|+|.++|.++..... ++ .++|
T Consensus 12 ~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~ 88 (252)
T CHL00131 12 NLHASVNENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKIL---EGDILFKGESILDLEPEERAHLGIFL 88 (252)
T ss_pred eEEEEeCCEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCC---CceEEECCEEcccCChhhhheeeEEE
Confidence 334444445799999999999999999999999999999999997 4565 9999999998765432 12 3789
Q ss_pred EcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcCCcc
Q 038815 244 ISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLGLDI 323 (1436)
Q Consensus 244 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 323 (1436)
++|++.+++.+|+.|++.+........ ... ++.+ ..+....++.+++.+||.+
T Consensus 89 ~~q~~~~~~~~~~~~~l~~~~~~~~~~---------------~~~-~~~~-----------~~~~~~~~~~~l~~~~l~~ 141 (252)
T CHL00131 89 AFQYPIEIPGVSNADFLRLAYNSKRKF---------------QGL-PELD-----------PLEFLEIINEKLKLVGMDP 141 (252)
T ss_pred EeccccccccccHHHHHHHhhhhhhcc---------------ccc-cccc-----------HHHHHHHHHHHHHHcCCch
Confidence 999999999999999998754311000 000 0000 0011123466789999963
Q ss_pred -cccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 038815 324 -CADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETY 397 (1436)
Q Consensus 324 -~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 397 (1436)
..+..++ .+|||||||||+||+++ +++|||||+|||+.++..+.+.|++++. .+ ++||.++|+.+.+.
T Consensus 142 ~~~~~~~~----~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tii~~tH~~~~~~ 215 (252)
T CHL00131 142 SFLSRNVN----EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMT-SE-NSIILITHYQRLLD 215 (252)
T ss_pred hhhccccc----cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CC-CEEEEEecCHHHHH
Confidence 3443322 25999999999998776 5999999999999999999999998764 34 45555777777777
Q ss_pred hh-cCeEEEecCCeEEEecChHHH
Q 038815 398 DL-FDDIILLSDGLIVYLGPRELV 420 (1436)
Q Consensus 398 ~l-fD~vilL~~G~iv~~G~~~~~ 420 (1436)
.. +|++++|++|++++.|+++.+
T Consensus 216 ~~~~d~i~~l~~G~i~~~~~~~~~ 239 (252)
T CHL00131 216 YIKPDYVHVMQNGKIIKTGDAELA 239 (252)
T ss_pred hhhCCEEEEEeCCEEEEecChhhh
Confidence 76 899999999999999988743
No 499
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=9.6e-30 Score=293.14 Aligned_cols=214 Identities=23% Similarity=0.289 Sum_probs=162.0
Q ss_pred ccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEEcCccCCCC-----Cccce
Q 038815 168 LQILPTRKKHLTILKDVSGIIRPGSMTLLLGPPSSGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----EPQRV 240 (1436)
Q Consensus 168 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GSGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~ 240 (1436)
++++..+++++++|+|+|+.|++||+++|+|||||||||||++|+|.+++. ...+|+|.++|+++... ..++.
T Consensus 23 ~~nl~~~~~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~~~~~~ 102 (274)
T PRK14265 23 VEGVKVFYGGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSVKLRRQ 102 (274)
T ss_pred EeeEEEEeCCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhHHHhhc
Confidence 344455555567999999999999999999999999999999999997631 11389999999887421 12457
Q ss_pred EEEEcCCCCCCCCCCHHHHHHhhhhhccCCCccchhhhhhHHhhhcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHHHcC
Q 038815 241 AAYISQHDNHIGEMTVRETLAFSARCQGVGSRFDMLTELDKRENEAGIKPDPDIDVFMKAAATEGQEANVLTDYYLKVLG 320 (1436)
Q Consensus 241 ~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg 320 (1436)
++|++|++..++. ||.||+.++....+.. . + .+...+..++.+|
T Consensus 103 i~~v~q~~~l~~~-tv~~nl~~~~~~~~~~----------~-----------~--------------~~~~~~~~l~~~~ 146 (274)
T PRK14265 103 VGMVFQRPNPFPK-SIYENIAFAPRANGYK----------G-----------N--------------LDELVEDSLRRAA 146 (274)
T ss_pred EEEEccCCccccc-cHHHHHHhHHHhcCch----------H-----------H--------------HHHHHHHHHHHcc
Confidence 9999999887774 9999998764322100 0 0 0011234566666
Q ss_pred CcccccccccCcccCCCCHHHHHHHhhhhhh-----hhheeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhh
Q 038815 321 LDICADTLVGDEMIRGISGGQKRRVTTGPAL-----ALFMDEISNGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPE 395 (1436)
Q Consensus 321 L~~~~~t~vg~~~~rgLSGGqrkRvsia~a~-----vlllDEptsgLDs~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~ 395 (1436)
+...... .-+..+..|||||||||+||+++ ++||||||+|||+.++..+.+.|+++.+ + ++|+.++|+.++
T Consensus 147 l~~~l~~-~~~~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiii~sH~~~~ 222 (274)
T PRK14265 147 IWEEVKD-KLKEKGTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE--Q-YTIIMVTHNMQQ 222 (274)
T ss_pred cchhhHH-HhcCCcccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHH
Confidence 5321111 11245668999999999998776 4999999999999999999999998742 3 556668888999
Q ss_pred HHhhcCeEEEec---------CCeEEEecChHHHH
Q 038815 396 TYDLFDDIILLS---------DGLIVYLGPRELVL 421 (1436)
Q Consensus 396 ~~~lfD~vilL~---------~G~iv~~G~~~~~~ 421 (1436)
+.+++|++++|+ +|++++.|+++++.
T Consensus 223 ~~~~~d~i~~l~~~~~~~~~~~G~~~~~g~~~~~~ 257 (274)
T PRK14265 223 ASRVADWTAFFNTEIDEYGKRRGKLVEFSPTEQMF 257 (274)
T ss_pred HHHhCCEEEEEecccccccccCceEEEeCCHHHHH
Confidence 999999999997 89999999998874
No 500
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=99.97 E-value=2.1e-30 Score=326.82 Aligned_cols=196 Identities=29% Similarity=0.436 Sum_probs=163.0
Q ss_pred eeEEeceeeeeecccchhhcccccCceEEeeceEeeEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEcCeec
Q 038815 866 SLTFDEVVYSVDMPQEMKLQGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSITISGYLK 945 (1436)
Q Consensus 866 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~Lag~~~~~~~~G~i~i~g~~~ 945 (1436)
.++++|+++.++. +++.+|+|+|+.++|||.+||+||||||||||+++|+|..+ +.+|+|.+||.+.
T Consensus 320 ~i~~~~v~f~y~~-----------~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~--~~~G~I~~~g~~i 386 (529)
T TIGR02857 320 SLEFSGLSVAYPG-----------RRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVD--PTEGSIAVNGVPL 386 (529)
T ss_pred eEEEEEEEEECCC-----------CCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEeh
Confidence 6899999998752 12468999999999999999999999999999999999876 4579999999876
Q ss_pred cc---ccccceEEEeccCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCCC
Q 038815 946 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLPPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLPG 1015 (1436)
Q Consensus 946 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 1015 (1436)
.+ ..+++.+|||+|++.+++ .|++||+.++. + +.++ +.++++++..++.+. .|+.+|..+
T Consensus 387 ~~~~~~~lr~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~~~----~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g 456 (529)
T TIGR02857 387 ADADADSWRDQIAWVPQHPFLFA-GTIAENIRLAR----P-DASD----AEIRRALERAGLDEFVAALPQGLDTLIGEGG 456 (529)
T ss_pred hhCCHHHHHhheEEEcCCCcccC-cCHHHHHhccC----C-CCCH----HHHHHHHHHcCcHHHHHhCcccccchhcccc
Confidence 43 456788999999998886 69999998742 1 1222 345677777777653 366777643
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceecCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHHhhh
Q 038815 1016 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFESFDE 1088 (1436)
Q Consensus 1016 ~~~lSgGqrkRl~ia~~L~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqps~~if~~FD~ 1088 (1436)
..||||||||++|||+|+++|++|+||||||+||+.++..+++.|+++. +|+|+|+++|+++ ....+|+
T Consensus 457 -~~LSgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ 525 (529)
T TIGR02857 457 -AGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALA-QGRTVLLVTHRLA--LAERADR 525 (529)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhc-CCCEEEEEecCHH--HHHhCCE
Confidence 5799999999999999999999999999999999999999999999875 5899999999984 3466776
Done!